Citrus Sinensis ID: 017017

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
Protein Sequence
MARASFSSCGYKSLNSMADNEEPMIIDKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSRYDGETRNDP
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccHcccccccccccccHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccEEHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
marasfsscgykslnsmadneepmiidkyltnqsplfrklKSWQWWVLVVVNIFFLIAGQAAAVILGRYyydqggnskWLATLVQTaafpilyiplfllpasqevssssrypsFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVnegsegpskvsKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLfasgewrtlsgemqgfgkgKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVistsslaitPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDdyrsrksrydgetrndp
Flexible Loop (DISEMBL)
marasfsscgykslnsmadneePMIIDKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNegsegpskvSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSrksrydgetrndp
Low Complexity Region (SEG)
MARASFSSCGYKSLNSMADNEEPMIIDKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAfpilyiplfllpASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTalilnsvvilslsaaliavnEGSEGPSKVSKWKYILGFISTVGASAIYslllslmqlsFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSRYDGETRNDP
Disordered region (IsUnstruct)
***********************MIIDKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAFPILYIPLFLLPASQEV***SRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDY***************
Disordered Region (DISOPRED)
*********************************************WVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALI*****************ILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQ*********************
Disordered Region (DISEMBL)
*********GYKSLNSMADNEEPMIIDKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAFPILYIPLFLLPAS********YPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVN********VSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRK***********
Disordered Region (DISPRO)
*************************************RKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSR************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MARASFSSCGYKSLNSMADNEEPMIIDKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSRYDGETRNDP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	379	2.2.26 [Sep-21-2011]
Q9LPF6	379	Probable purine permease	yes	no	0.952	0.952	0.682	1e-128
Q8RY83	361	Probable purine permease	no	no	0.920	0.966	0.575	1e-109
Q9FLL4	358	Putative purine permease	no	no	0.875	0.927	0.599	1e-104
O49726	390	Probable purine permease	no	no	0.865	0.841	0.546	1e-99
O49725	390	Probable purine permease	no	no	0.891	0.866	0.543	3e-97
Q0WRB9	394	Probable purine permease	no	no	0.870	0.837	0.495	4e-82
Q8RY74	377	Probable purine permease	no	no	0.926	0.931	0.470	1e-80
O49722	387	Probable purine permease	no	no	0.878	0.860	0.486	4e-80
Q2V3H2	390	Probable purine permease	no	no	0.928	0.902	0.456	4e-80
Q94GB1	358	Purine permease 2 OS=Arab	no	no	0.846	0.896	0.332	4e-53

>sp|Q9LPF6|PUP11_ARATH Probable purine permease 11 OS=Arabidopsis thaliana GN=PUP11 PE=1 SV=1

 Score =  458 bits (1178), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 249/365 (68%), Positives = 314/365 (86%), Gaps = 4/365 (1%)

Query: 18  ADNEEPMII--DKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGG 75
           A N+EP+++  +  +   +PL  KLKSWQWWVLV VNIFFLI GQAA+V+LGR+YYD+GG
Sbjct: 14  AGNQEPILVKEESVVGIPTPLL-KLKSWQWWVLVSVNIFFLIGGQAASVLLGRFYYDEGG 72

Query: 76  NSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLY 135
           NSKW+ATLVQTAAFPILYIPL LLP+S  V SS    S   + L+Y++LG I+AGDNMLY
Sbjct: 73  NSKWMATLVQTAAFPILYIPLLLLPSSASVESSESSCSLKYIVLIYVLLGVIIAGDNMLY 132

Query: 136 SVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSE 195
           SVGLLYLSASTYSLICA+QLAFNAVFSYFIN+QKFTALILNSVV+LS SAALIA+N+ ++
Sbjct: 133 SVGLLYLSASTYSLICATQLAFNAVFSYFINAQKFTALILNSVVLLSFSAALIALNDDAD 192

Query: 196 GPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATC 255
            PS VS+ KYI+GF+ T+ ASA+YSLLLSLMQ SF+K+LKR++F VVL+MQIYTS VATC
Sbjct: 193 TPSGVSRSKYIVGFVCTLAASALYSLLLSLMQFSFEKILKRETFSVVLEMQIYTSLVATC 252

Query: 256 ICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSN 315
           + ++GLFASGEWRTL GEM+G+ KG+ SYV+ +VWTAV+WQVCSVGVVGLI++V+SLFSN
Sbjct: 253 VSVIGLFASGEWRTLHGEMEGYHKGQASYVLTLVWTAVTWQVCSVGVVGLIFLVTSLFSN 312

Query: 316 VISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSRYDGET 375
           VIST SLA+TP+ +++VF DK++GVK++AML+AIWGFASY+YQN++DD + R++R   + 
Sbjct: 313 VISTLSLAVTPLAALVVFRDKMSGVKIMAMLIAIWGFASYVYQNHIDDLKVRQARQQAQA 372

Query: 376 -RNDP 379
            R +P
Sbjct: 373 GRVEP 377

Arabidopsis thaliana (taxid: 3702)

>sp|Q8RY83|PUP13_ARATH Probable purine permease 13 OS=Arabidopsis thaliana GN=PUP13 PE=2 SV=1

 Score =  395 bits (1014), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 206/358 (57%), Positives = 267/358 (74%), Gaps = 9/358 (2%)

Query: 19  DNEEPMIIDK------YLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYD 72
           D EE M++ K        T+      KLK   WW+LV ++IFFLI+ QA AV+LGR+YY+
Sbjct: 2   DEEEAMLLLKEEDEGTRRTSVPTQLMKLKRTHWWILVFISIFFLISAQAIAVLLGRFYYN 61

Query: 73  QGGNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDN 132
           +GGNSKW++TLVQT  FPILY+PL  LPAS   SSS     F TL  +YL LG  +  DN
Sbjct: 62  EGGNSKWISTLVQTCGFPILYLPLCFLPASHSSSSSCS---FKTLVWIYLSLGFAIGLDN 118

Query: 133 MLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNE 192
           +LYS GLLYLSASTYS++C+SQLAFN VFSY+INSQK T LIL SV+ LS+SA L+++++
Sbjct: 119 LLYSFGLLYLSASTYSILCSSQLAFNGVFSYYINSQKITCLILFSVLFLSVSAVLVSLDD 178

Query: 193 GSEGPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFV 252
            S  PS  SKW Y++G + TV AS IYSL LSLMQ SF+ VLK ++F +VL+MQIYTS V
Sbjct: 179 DSNSPSGDSKWSYLIGCLCTVFASLIYSLQLSLMQFSFENVLKSETFSMVLEMQIYTSLV 238

Query: 253 ATCICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSL 312
           A+C+ ++GLFASGEW  LS EM+ F +G+V YV+ +V TAVSWQ+ SVG V LI++VSSL
Sbjct: 239 ASCVAVIGLFASGEWMLLSVEMEEFHEGQVIYVLTLVGTAVSWQLGSVGAVALIFLVSSL 298

Query: 313 FSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSR 370
           FSN+I T SL +TP+ ++ VFHDK+  VK++AML+A  GF  YIYQNYLDD + +++R
Sbjct: 299 FSNLIGTLSLIVTPLAAIAVFHDKLTEVKMVAMLIAFMGFGFYIYQNYLDDLKVQRAR 356

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLL4|PUP12_ARATH Putative purine permease 12 OS=Arabidopsis thaliana GN=PUP12 PE=3 SV=1

 Score =  380 bits (975), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/332 (59%), Positives = 255/332 (76%)

Query: 39  KLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAFPILYIPLFL 98
           KL   QWW+LV ++IFFLI+ QA +V+LGR+YY++GGNSKW++TLVQT  FPILY+PL L
Sbjct: 22  KLNRSQWWILVFISIFFLISAQAISVLLGRFYYNEGGNSKWISTLVQTGGFPILYLPLSL 81

Query: 99  LPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFN 158
           LPASQ  SSSS   SF TL  +YL LG  +  DN LYSVGLLYLSASTYS++CASQLAFN
Sbjct: 82  LPASQSSSSSSSSSSFKTLVWIYLSLGFAIGLDNFLYSVGLLYLSASTYSILCASQLAFN 141

Query: 159 AVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWKYILGFISTVGASAI 218
            VF Y+INSQK T LI  SV+ LS+SA L+++++ S  PS  SKW Y++G    V AS I
Sbjct: 142 GVFYYYINSQKITCLIFFSVLFLSISAVLVSLDDDSNSPSGDSKWSYLIGCFCAVFASLI 201

Query: 219 YSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFG 278
           YSL LSLMQ SF+KVLK ++  +VL+MQIYTS VA+C+ ++GLFASGEW  LS EM+ F 
Sbjct: 202 YSLQLSLMQFSFEKVLKSETLSMVLEMQIYTSLVASCVAVIGLFASGEWMLLSVEMEEFQ 261

Query: 279 KGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVN 338
           +G+V YV+ +V  AVS Q+  VG V LI++VSSLFSN+IST SL +TP+ ++ VFHDK+ 
Sbjct: 262 EGQVIYVLTLVGAAVSCQLGCVGAVSLIFLVSSLFSNLISTLSLIVTPLAAIAVFHDKLT 321

Query: 339 GVKVIAMLMAIWGFASYIYQNYLDDYRSRKSR 370
            VK++AM +A  GF  YIYQNYLDD + +++R
Sbjct: 322 EVKMVAMPIAFTGFTFYIYQNYLDDLKVQRAR 353

Arabidopsis thaliana (taxid: 3702)

>sp|O49726|PUP9_ARATH Probable purine permease 9 OS=Arabidopsis thaliana GN=PUP9 PE=2 SV=2

 Score =  363 bits (932), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 181/331 (54%), Positives = 242/331 (73%), Gaps = 3/331 (0%)

Query: 42  SWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAFPILYIPLFLLPA 101
           +++ W+ V +  FF+I+GQ+ A ILGR YY+ GGNSKWLAT+VQ   FPIL +P  LL  
Sbjct: 40  TYKRWLRVAIYTFFVISGQSVATILGRLYYENGGNSKWLATVVQLVGFPIL-LPYHLLSV 98

Query: 102 SQEVSS--SSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNA 159
               ++    +  S    ALVY+VLG ++     LYS+GLLYL  ST SLICASQLAF A
Sbjct: 99  KTHTTTQRDGKLTSLRNRALVYIVLGLLVGAACYLYSIGLLYLPVSTLSLICASQLAFTA 158

Query: 160 VFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWKYILGFISTVGASAIY 219
            FSY +NSQK T +ILNS+ +L++S+ L+A N       KV+K +Y+ GF+ TVGASA +
Sbjct: 159 FFSYLLNSQKLTPIILNSLFLLTISSTLLAFNNEESDSKKVTKGEYVKGFVCTVGASAGF 218

Query: 220 SLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGK 279
            LLLSL QL+F+KVLK+Q+F  V++M IY S VA+C+ +VGLFAS EW+TLS EM+ +  
Sbjct: 219 GLLLSLQQLAFRKVLKKQTFSEVINMIIYMSLVASCVSVVGLFASSEWKTLSSEMENYKL 278

Query: 280 GKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNG 339
           GKVSYVM +VWTAV+WQV S+G  GLI+ +SSLFSN IS   L + P+++VI+FHDK+NG
Sbjct: 279 GKVSYVMNLVWTAVTWQVFSIGCTGLIFELSSLFSNAISALGLPVVPILAVIIFHDKMNG 338

Query: 340 VKVIAMLMAIWGFASYIYQNYLDDYRSRKSR 370
           +KVI+M++AIWGF SY+YQ YLD+   +KS 
Sbjct: 339 LKVISMILAIWGFVSYVYQQYLDETNLKKSN 369

Arabidopsis thaliana (taxid: 3702)

>sp|O49725|PUP10_ARATH Probable purine permease 10 OS=Arabidopsis thaliana GN=PUP10 PE=2 SV=2

 Score =  355 bits (912), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 186/342 (54%), Positives = 247/342 (72%), Gaps = 4/342 (1%)

Query: 41  KSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAFPILYIPLFLLP 100
            +++ W+ V +  FF+I+GQ  A ILGR YYD GGNSKWLAT+VQ   FP+L +P ++L 
Sbjct: 39  NTYKRWLRVTLYTFFVISGQTVATILGRVYYDNGGNSKWLATVVQLVGFPVL-LPYYILS 97

Query: 101 ASQEVSSSS--RYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFN 158
                ++    +  S     LVY+VLG ++  D  LYS+GLLYL  STYSLICASQLAFN
Sbjct: 98  FKTHATTDRDGKRTSPRNRVLVYVVLGLLVGADCYLYSIGLLYLPVSTYSLICASQLAFN 157

Query: 159 AVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWKYILGFISTVGASAI 218
           A FSYF+NSQK T +ILNS+ +L++S+ L+A N      +KV+K +Y+ GFI TV ASA 
Sbjct: 158 AFFSYFLNSQKLTPIILNSLFLLTISSTLLAFNNEETDSTKVTKGEYVKGFICTVAASAG 217

Query: 219 YSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFG 278
           Y L+LSL QL+F KVLK+Q+F  V+DM IY S VA+C+ +VGLFAS EW+TLS EM  + 
Sbjct: 218 YGLVLSLQQLAFLKVLKKQNFSEVMDMIIYVSLVASCVSVVGLFASSEWKTLSSEMDNYK 277

Query: 279 KGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVN 338
            GKVSY+M +VWTAV+WQV S+G  GLI+ +SSLFSN IS   L + P+++VI+FHDK+N
Sbjct: 278 HGKVSYIMNLVWTAVTWQVFSIGGTGLIFELSSLFSNAISVLGLPVVPILAVIIFHDKMN 337

Query: 339 GVKVIAMLMAIWGFASYIYQNYLDDYRSRKSRYDGETRN-DP 379
           G+KVI+M++AIWGF SY+YQ YLDD   +K+     T + DP
Sbjct: 338 GLKVISMILAIWGFTSYVYQQYLDDKNLKKNHEITTTESPDP 379

Arabidopsis thaliana (taxid: 3702)

>sp|Q0WRB9|PUP8_ARATH Probable purine permease 8 OS=Arabidopsis thaliana GN=PUP8 PE=2 SV=1

 Score =  305 bits (781), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 165/333 (49%), Positives = 238/333 (71%), Gaps = 3/333 (0%)

Query: 41  KSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAFPILYIPLFLLP 100
           K+++ W+ + + +FF++A QA + ILGR YY+ GG S W+ TLVQ   FP+L++  F   
Sbjct: 40  KNYKKWLRISIYVFFVLACQALSTILGRVYYENGGKSTWMGTLVQLIGFPVLFLFRFFSQ 99

Query: 101 ASQEVSSSS---RYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAF 157
                 + +   ++ SF  L  VY+V G +++ ++ + SVGLLYL  ST+SLI ASQLAF
Sbjct: 100 TKNPKPTEADFRKFSSFTILGSVYIVTGLLVSANSYMSSVGLLYLPVSTFSLILASQLAF 159

Query: 158 NAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWKYILGFISTVGASA 217
            A FSYF+NSQKFT  I+NS+ +L++S+AL+ VN  SE  +KVS+ KY++G I T+GASA
Sbjct: 160 TAFFSYFLNSQKFTPFIVNSLFLLTISSALLVVNTDSENTAKVSRVKYVIGIICTIGASA 219

Query: 218 IYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGF 277
              LLLSL+QL  +KVLK+Q+F  V D+  Y S VA+C+ ++GLFASGEW+TL+ EM+ +
Sbjct: 220 GIGLLLSLVQLILRKVLKKQTFSTVTDLVAYQSLVASCVVLIGLFASGEWKTLTSEMENY 279

Query: 278 GKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKV 337
             GKV YVM +   A+SWQV ++GVVGLI+  SS+FSN I+   L I PVV+VIVFHDK+
Sbjct: 280 KLGKVPYVMTLASIAISWQVYTIGVVGLIFESSSVFSNSITAVGLPIVPVVAVIVFHDKM 339

Query: 338 NGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSR 370
           N  K+ ++++AIWGF S++YQ+YLD+ + + S 
Sbjct: 340 NASKIFSIILAIWGFISFVYQHYLDEKKLKTSH 372

Arabidopsis thaliana (taxid: 3702)

>sp|Q8RY74|PUP21_ARATH Probable purine permease 21 OS=Arabidopsis thaliana GN=PUP21 PE=2 SV=1

 Score =  300 bits (768), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 167/355 (47%), Positives = 239/355 (67%), Gaps = 4/355 (1%)

Query: 19  DNEEPMIIDKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSK 78
            N E  ++D   T +S    + K+ + W+ V +   F+I  Q  A +LGR YY+ GG S 
Sbjct: 13  QNLEANLLDHEET-ESFSVPQTKNCKRWLRVSIYAIFVIFCQPLATVLGRLYYENGGKST 71

Query: 79  WLATLVQTAAFPILYIPLFLLPASQEVSSSSRY---PSFVTLALVYLVLGAILAGDNMLY 135
           ++ TL+Q   FP+L +  F     Q  S+ + +   PSF TLA VYL  G +++    L 
Sbjct: 72  YVVTLLQLIGFPVLILFRFFSRIRQPKSTDTNFSQSPSFTTLASVYLCTGLLVSAYAYLS 131

Query: 136 SVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSE 195
           +VGLLYL  ST+SLI ASQLAF A FSYF+NSQKFT LI+NS+ +L++S+AL+ VN  SE
Sbjct: 132 AVGLLYLPVSTFSLILASQLAFTAFFSYFLNSQKFTPLIVNSLFLLTVSSALLVVNTDSE 191

Query: 196 GPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATC 255
             + VS+ +Y++GFI T+GASA   L+LSL+QL F+KV  + +   VLD+  Y S VATC
Sbjct: 192 NTTNVSRVQYVIGFICTIGASAGIGLVLSLIQLLFRKVFTKHTSSAVLDLANYQSLVATC 251

Query: 256 ICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSN 315
           + ++GLFASGEWRTL  EM+ +  GKVSY++ +   A+ WQV +VG VGLI+  SS+FSN
Sbjct: 252 VVLIGLFASGEWRTLPSEMRNYKLGKVSYILTLASAAIFWQVYTVGCVGLIFESSSVFSN 311

Query: 316 VISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSR 370
            I+   L I PVV+VIVFHDK++  K+ ++++AIWGF S++YQ+YLD+ + +  +
Sbjct: 312 SITAVGLPIVPVVAVIVFHDKMDASKIFSIILAIWGFLSFVYQHYLDEKKLKTCQ 366

Arabidopsis thaliana (taxid: 3702)

>sp|O49722|PUP6_ARATH Probable purine permease 6 OS=Arabidopsis thaliana GN=PUP6 PE=3 SV=2

 Score =  298 bits (764), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 168/345 (48%), Positives = 234/345 (67%), Gaps = 12/345 (3%)

Query: 38  RKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAFPILYIPLF 97
            +   + W + V + +  L+AG+  A +LGR YY++GG S WL TLVQ   FP L +P +
Sbjct: 27  ERSHKYSWRLRVSLYVTLLLAGETIATLLGRLYYEKGGKSTWLETLVQLVGFP-LTLPCY 85

Query: 98  LL----PASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICAS 153
                 P+  +  +     SF+TL+LVY+ LG ++AG  +LYS GLLYL  ST+SLI AS
Sbjct: 86  YYLKPEPSKTKTITKKTTSSFLTLSLVYIGLGLLVAGHCILYSFGLLYLPVSTFSLISAS 145

Query: 154 QLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWK----YILGF 209
           QLAFNAVFSYF+NSQK T  ILNS+V+L++S+ L+ +    E PS  SK      Y++G+
Sbjct: 146 QLAFNAVFSYFLNSQKITPFILNSLVLLTISSTLLVIQHEPESPSSTSKSAAKSKYVIGY 205

Query: 210 ISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRT 269
           I  VG+SA YSL+LSL   +F+K+LK+ +F  +LDM  Y S VATC+ +VGLF SG W+ 
Sbjct: 206 ICAVGSSAGYSLVLSLTDYAFEKILKKYTFKAILDMATYPSMVATCVVVVGLFGSGGWKK 265

Query: 270 LSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVS 329
           LS EM+ F  GK SY+++ + + +SWQ C +G VGLI  VSSLFSNVIST  L + PV++
Sbjct: 266 LSTEMEEFQLGKSSYILINIGSTISWQACLIGSVGLIIEVSSLFSNVISTLCLPVVPVLA 325

Query: 330 VIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSRYDGE 374
           V+ F D+++G+K++AM +AIWGF SY YQ+Y++D   RK   D E
Sbjct: 326 VVFFRDEMSGIKLVAMFLAIWGFVSYGYQHYVND---RKPEEDQE 367

Arabidopsis thaliana (taxid: 3702)

>sp|Q2V3H2|PUP7_ARATH Probable purine permease 7 OS=Arabidopsis thaliana GN=PUP7 PE=2 SV=1

 Score =  298 bits (763), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 163/357 (45%), Positives = 241/357 (67%), Gaps = 5/357 (1%)

Query: 19  DNEEPMIIDKYLTNQSP--LFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGN 76
            N E  +ID  +  +S      + ++++ W+ V + + F++  Q  A ILGR YY+ GGN
Sbjct: 13  QNLEANLIDHEVVTESSSSAVPQTENYKRWLRVSIYVIFVLFCQPLATILGRLYYENGGN 72

Query: 77  SKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRY---PSFVTLALVYLVLGAILAGDNM 133
           S ++ TL+Q   FP+L +  F     Q  S+ + +   PSF TLA VYL  G +++    
Sbjct: 73  STYVVTLLQLIGFPVLVLFRFFSRIRQPKSTDTNFSQSPSFTTLASVYLCTGLLVSAYAY 132

Query: 134 LYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEG 193
           L +VGLLYL  ST+SLI ASQLAF A FSYF+NSQKFT LI++S+++L++S+AL+ VN  
Sbjct: 133 LSAVGLLYLPVSTFSLILASQLAFTAFFSYFLNSQKFTPLIVSSLLLLTVSSALLVVNTD 192

Query: 194 SEGPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVA 253
           SE  + VS+ +Y++GFI T+GASA   LLLSL+Q+ F+KV  + +   V D+ IY S VA
Sbjct: 193 SENSTNVSRVQYVIGFICTIGASAGIGLLLSLIQMLFRKVFTKHTSSAVTDLAIYQSLVA 252

Query: 254 TCICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLF 313
           +C+ ++GLFASGEW TL  EM+ +  GKVSYV+ +   A+SWQV ++G+VGLI+  SS+F
Sbjct: 253 SCVVLIGLFASGEWETLPSEMRNYKLGKVSYVLTLASAAISWQVYTLGLVGLIFESSSVF 312

Query: 314 SNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSR 370
           SN I+   L I PV +VIVFHD+++  K+ ++++AI GF S++YQ+YLD+ +   S 
Sbjct: 313 SNSITAVGLPIVPVAAVIVFHDRMDASKIFSIILAICGFLSFVYQHYLDEKKLNTSH 369

Arabidopsis thaliana (taxid: 3702)

>sp|Q94GB1|PUP2_ARATH Purine permease 2 OS=Arabidopsis thaliana GN=PUP2 PE=1 SV=1

 Score =  208 bits (530), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 199/337 (59%), Gaps = 16/337 (4%)

Query: 47  VLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAFPILYIPLFLLPAS---- 102
           VLV++N  FL  G     ++ R Y+  GG   W  + +QT   P+++ PL L        
Sbjct: 6   VLVIINCIFLAIGNCGGPLMMRLYFQNGGERIWFPSFLQTVGCPLIFFPLLLSFLRRRRC 65

Query: 103 -QEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVF 161
            +E  ++  +     L +  +V+G ++  DN LYS GL Y+  ST SLI ++QL F A+F
Sbjct: 66  LEEQETTPFFLMKPPLFIAAIVVGLLVGFDNYLYSYGLAYIPVSTASLIISAQLGFTALF 125

Query: 162 SYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWKYILGFISTVGASAIYSL 221
           ++F+  QKFT   +N++V+L+  A ++A+N  S+  +  +  +Y++GFI T+GA+ +Y  
Sbjct: 126 AFFMVKQKFTPFTINAIVLLTGGAVVLALNSDSDKLANETHKEYVVGFIMTLGAALLYGF 185

Query: 222 LLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEW-----------RTL 270
           +L L++LS++K  +R ++ + L+ Q+   F ATC+C+VG+ A+G++           R +
Sbjct: 186 ILPLVELSYKKSGQRITYTLALEFQMVLCFAATCVCLVGMLAAGDFKVKHALFIFKNRVI 245

Query: 271 SGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSV 330
           +GE + F  G+  Y +VIV+TA+ WQ   VG +GLI+  SSL S ++ ++ L +T +++V
Sbjct: 246 AGEARDFKLGESLYYVVIVFTAIIWQAFFVGAIGLIFCASSLVSGIMVSALLPVTVILAV 305

Query: 331 IVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSR 367
           I F +K    K +A+ +++WG  SY Y     + +++
Sbjct: 306 ICFQEKFQAGKGVALALSLWGSVSYFYGQVKSEEKTK 342

Mediates adenine transport. May be involved in the uptake of cytokinin analogs.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	379
224136518	368	predicted protein [Populus trichocarpa]	0.952	0.980	0.726	1e-146
359807387	362	uncharacterized protein LOC100819409 [Gl	0.947	0.991	0.685	1e-144
356566967	366	PREDICTED: probable purine permease 11-l	0.947	0.980	0.679	1e-143
255571109	366	ATPUP11, putative [Ricinus communis] gi|	0.952	0.986	0.706	1e-141
388514025	364	unknown [Lotus japonicus]	0.949	0.989	0.685	1e-141
225453268	374	PREDICTED: probable purine permease 11 [	0.960	0.973	0.698	1e-138
388500174	364	unknown [Lotus japonicus]	0.923	0.961	0.654	1e-127
307136271	378	purine transmembrane transporter [Cucumi	0.941	0.944	0.645	1e-126
449498969	378	PREDICTED: probable purine permease 11-l	0.941	0.944	0.643	1e-126
42571763	367	purine permease 11 [Arabidopsis thaliana	0.955	0.986	0.680	1e-126

>gi|224136518|ref|XP_002326880.1| predicted protein [Populus trichocarpa] gi|222835195|gb|EEE73630.1| predicted protein [Populus trichocarpa]

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 266/366 (72%), Positives = 322/366 (87%), Gaps = 5/366 (1%)

Query: 17  MADNEEPMI--IDKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQG 74
           M DNEEP++  ++  +  QS LF KL+ WQWW+LV +NIFFL+AGQ+AAV+LGR+YYDQG
Sbjct: 1   MEDNEEPILNKVENTVALQSLLF-KLQRWQWWLLVAINIFFLVAGQSAAVLLGRFYYDQG 59

Query: 75  GNSKWLATLVQTAAFPILYIPLFLLPASQE-VSSSSRYPSFVTLALVYLVLGAILAGDNM 133
           GNSKW+AT++QTA FPIL+IPLFLLP+ +E +SS +  PS  TLA +YLVLG I+AGDN 
Sbjct: 60  GNSKWIATVIQTAGFPILFIPLFLLPSDKEPLSSYTSSPSVRTLASIYLVLGVIIAGDNY 119

Query: 134 LYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEG 193
           LYS+GL YLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSV+ILS S+ALIAVN+ 
Sbjct: 120 LYSLGLSYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVIILSFSSALIAVNDD 179

Query: 194 SEGPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVA 253
           S GPS VSKWKY LGF++T+GASAIYSLLLSLMQLSFQKV+K+++F VVL+MQI+TS VA
Sbjct: 180 SGGPSGVSKWKYFLGFLATLGASAIYSLLLSLMQLSFQKVIKKETFSVVLEMQIFTSLVA 239

Query: 254 TCICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLF 313
           TC+ + GLFASGEW+TL GEMQ FGKG VSYV+ +VWTAV+WQVCSVGVVGLI+VVSSLF
Sbjct: 240 TCVSVAGLFASGEWKTLHGEMQSFGKGSVSYVLTLVWTAVTWQVCSVGVVGLIFVVSSLF 299

Query: 314 SNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSRYD- 372
           SNVIST +LA++P+ +VIVFHDK+NGVK+IAML+A+WGFASY YQNYLDD + RK++ + 
Sbjct: 300 SNVISTVALAVSPIAAVIVFHDKMNGVKIIAMLLAVWGFASYTYQNYLDDSKLRKAQSNV 359

Query: 373 GETRND 378
            ETRN+
Sbjct: 360 TETRNN 365

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807387|ref|NP_001241384.1| uncharacterized protein LOC100819409 [Glycine max] gi|255646272|gb|ACU23620.1| unknown [Glycine max]

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 248/362 (68%), Positives = 310/362 (85%), Gaps = 3/362 (0%)

Query: 17  MADNEEPMIIDKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGN 76
           M DNEEPMI+   ++  +  F K K WQWW LV ++I FLI GQ+AAVILGR+YYDQGGN
Sbjct: 1   MTDNEEPMIVPGSMSELA--FNKYKRWQWWCLVTLSIAFLIVGQSAAVILGRFYYDQGGN 58

Query: 77  SKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYS 136
           SKW+ATLVQTAAFPIL+IPLF +P+  E S+S+  P  + L L+Y  LG ++A DNM+YS
Sbjct: 59  SKWMATLVQTAAFPILFIPLFTIPSPPEASTSASPPIKIIL-LIYFGLGVLIAADNMMYS 117

Query: 137 VGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEG 196
            GLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALI+NS V+L+LSAAL+AVNE ++ 
Sbjct: 118 TGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALIINSTVVLTLSAALLAVNEDTDE 177

Query: 197 PSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCI 256
           PS  SK KYI+GF+ T+GASA+YSLLLSLMQL+F+KVLK+++F VVL+MQIYTSFVA+  
Sbjct: 178 PSGFSKGKYIIGFLCTLGASAVYSLLLSLMQLTFEKVLKKETFSVVLEMQIYTSFVASGA 237

Query: 257 CIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNV 316
            ++GLFASGEWRTL GEM+GF KG V+YVM +VWT+++WQVCSVGVVGLI++VSSL+SNV
Sbjct: 238 SVIGLFASGEWRTLHGEMEGFQKGYVAYVMTLVWTSIAWQVCSVGVVGLIFLVSSLYSNV 297

Query: 317 ISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSRYDGETR 376
           IST SLA+TP+ +VIVFHDK+NGVK+I+ML+A+WGFASYIYQNYLDD ++R ++   +++
Sbjct: 298 ISTVSLAVTPIAAVIVFHDKMNGVKIISMLLALWGFASYIYQNYLDDSKTRHAQAATKSQ 357

Query: 377 ND 378
           ND
Sbjct: 358 ND 359

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566967|ref|XP_003551696.1| PREDICTED: probable purine permease 11-like [Glycine max]

 Score =  513 bits (1321), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 246/362 (67%), Positives = 307/362 (84%), Gaps = 3/362 (0%)

Query: 17  MADNEEPMIIDKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGN 76
           ++D+EEPMI+   ++  +  F K K WQWW LV ++I FLI GQ+AAVILGR+YYDQGGN
Sbjct: 5   ISDSEEPMIVPGTMSELA--FNKYKRWQWWCLVTLSIAFLIVGQSAAVILGRFYYDQGGN 62

Query: 77  SKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYS 136
           SKW+ATLVQTAAFPIL+IPLF +P+  E S+S+   S   + L+Y VLG ++A DNM+YS
Sbjct: 63  SKWMATLVQTAAFPILFIPLFTIPSPPEASTSAS-SSIKIILLIYFVLGILIAADNMMYS 121

Query: 137 VGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEG 196
            GLLYLSASTYSLI ASQLAFNAVFSYFINSQKFTALI+NS V+L+LSAAL+AVNE S+ 
Sbjct: 122 TGLLYLSASTYSLISASQLAFNAVFSYFINSQKFTALIINSTVVLTLSAALLAVNEDSDE 181

Query: 197 PSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCI 256
           PS +S  KYI+GF+ T+GASA+YSLLLSLMQL+F+KVLK+++F VVL MQIYTS VATC 
Sbjct: 182 PSGLSMGKYIIGFLCTLGASAVYSLLLSLMQLTFEKVLKKETFSVVLQMQIYTSLVATCA 241

Query: 257 CIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNV 316
            ++GLFASGEW TL GEM+GF KG V+YVM +VWTA++WQVCSVGVVGLI++VSSL+SNV
Sbjct: 242 SVIGLFASGEWHTLHGEMKGFQKGHVAYVMTLVWTAIAWQVCSVGVVGLIFLVSSLYSNV 301

Query: 317 ISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSRYDGETR 376
           IST SLA+TP+ +VIVFHDK+NGVK+I+ML+A+WGFASYIYQNYLDD ++R ++   ++ 
Sbjct: 302 ISTVSLAVTPIAAVIVFHDKMNGVKIISMLLALWGFASYIYQNYLDDSKARHAQAVAKSH 361

Query: 377 ND 378
           ND
Sbjct: 362 ND 363

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571109|ref|XP_002526505.1| ATPUP11, putative [Ricinus communis] gi|223534180|gb|EEF35896.1| ATPUP11, putative [Ricinus communis]

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 257/364 (70%), Positives = 320/364 (87%), Gaps = 3/364 (0%)

Query: 17  MADNEEPMI-IDKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGG 75
           M DN+EP++  D+  T +S  F KLK WQWW+LV +NI FL+AGQ+AAV+LGR+YYD+GG
Sbjct: 1   MTDNQEPILNKDEAATTRSS-FLKLKLWQWWLLVAINISFLVAGQSAAVLLGRFYYDKGG 59

Query: 76  NSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLY 135
           NSKWLATLVQTAAFP+LY+PL LLP+S+E S+SS  PS  TLA++Y  LGA++AGDN LY
Sbjct: 60  NSKWLATLVQTAAFPVLYVPLCLLPSSEEPSTSSTSPSIRTLAMIYFFLGALIAGDNFLY 119

Query: 136 SVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSE 195
           S GLLYLSASTYSLICASQLAFNAV SYFINSQKFT+LILNSVV+LS SAALIAVN+ S+
Sbjct: 120 STGLLYLSASTYSLICASQLAFNAVLSYFINSQKFTSLILNSVVVLSFSAALIAVNDDSD 179

Query: 196 GPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATC 255
           GPS +SKWKYI+GF+ T+GASAIYSL+LSLMQL+FQK++K+++F VVLDMQIYTS VA+ 
Sbjct: 180 GPSGLSKWKYIIGFLCTLGASAIYSLVLSLMQLTFQKIIKKETFSVVLDMQIYTSLVASS 239

Query: 256 ICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSN 315
           + +VGLFASGEW+TL GEM+GFG G+VSY++ +VWTAVSWQVCSVGVVGLI++VSSLFSN
Sbjct: 240 VSVVGLFASGEWKTLHGEMEGFGSGRVSYILTMVWTAVSWQVCSVGVVGLIFLVSSLFSN 299

Query: 316 VISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSRYD-GE 374
           VIST +LA++P+ +V+VFHDK+NGVKVI++LMA WGF  Y YQNYLDD ++R++R++  E
Sbjct: 300 VISTVALAVSPIAAVLVFHDKMNGVKVISLLMAFWGFGCYTYQNYLDDSKARRARHEVNE 359

Query: 375 TRND 378
           T +D
Sbjct: 360 THHD 363

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514025|gb|AFK45074.1| unknown [Lotus japonicus]

 Score =  506 bits (1304), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 248/362 (68%), Positives = 308/362 (85%), Gaps = 2/362 (0%)

Query: 17  MADNEEPMIIDKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGN 76
           M DNEEPMI+    +++ P F K K WQWW +V ++I FLI GQ+AAVILGR+YYDQGGN
Sbjct: 1   MTDNEEPMILAG-PSSELP-FDKYKRWQWWFMVALSIAFLIIGQSAAVILGRFYYDQGGN 58

Query: 77  SKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYS 136
           SKW+ATLVQTAAFPIL+IP F +P+S E S+SS  PSF  + L+Y VLG ++A DNM+YS
Sbjct: 59  SKWIATLVQTAAFPILFIPFFAIPSSSEASTSSAPPSFKVIVLIYFVLGVLIAADNMMYS 118

Query: 137 VGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEG 196
            GLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALI+NS V+L+ SA+L+AVNE S+ 
Sbjct: 119 TGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALIINSTVVLTFSASLLAVNEDSDK 178

Query: 197 PSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCI 256
           P  +S+ KYI+GF+ T+GASA+YSL+LSLMQLSF KVLK+++F VVL+MQIYTS VATC 
Sbjct: 179 PDGLSQGKYIVGFLVTLGASALYSLILSLMQLSFDKVLKKETFSVVLEMQIYTSLVATCA 238

Query: 257 CIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNV 316
             +GLFASGEW +L GEM+GF KG+V+YV+ +VWTAV+WQVCSVGVVGLI++VSSL+SNV
Sbjct: 239 STIGLFASGEWHSLHGEMEGFKKGEVAYVLTLVWTAVAWQVCSVGVVGLIFLVSSLYSNV 298

Query: 317 ISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSRYDGETR 376
           IST SLA+TP+ SVIVFHDK+NGVK+I+ML+AIWGFASYIYQNY+DD ++R+++      
Sbjct: 299 ISTVSLAVTPIASVIVFHDKMNGVKIISMLLAIWGFASYIYQNYIDDLKTRRAQAVASKS 358

Query: 377 ND 378
           +D
Sbjct: 359 HD 360

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453268|ref|XP_002266773.1| PREDICTED: probable purine permease 11 [Vitis vinifera]

 Score =  496 bits (1277), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/368 (69%), Positives = 315/368 (85%), Gaps = 4/368 (1%)

Query: 13  SLNSMADNEEPMI-IDKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYY 71
           +L+  A + EP++  D+ LT QS  F  LK WQWW+LV +NIFFL+AGQAAAV+LGR+YY
Sbjct: 4   ALDMPAVSAEPILSKDETLTRQSS-FIGLKCWQWWLLVALNIFFLVAGQAAAVLLGRFYY 62

Query: 72  DQGGNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGD 131
           D+GGNSKW+AT VQTAAFPIL IPLFL+P+S+E S+++  PS+  LA +Y+ LG +LAGD
Sbjct: 63  DKGGNSKWMATFVQTAAFPILLIPLFLIPSSKEPSTTTP-PSWTILASIYIALGVVLAGD 121

Query: 132 NMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVN 191
           NMLYS GLLYL+ASTYSLICA+QLAFNAVFS++INSQKFTALILNSVVILSLSA+LIA+N
Sbjct: 122 NMLYSTGLLYLTASTYSLICATQLAFNAVFSFYINSQKFTALILNSVVILSLSASLIAIN 181

Query: 192 EGSEGPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSF 251
           + SEG S +SK KY +G I T+ ASA+YSLLLSLMQLSF+KV+K+++F VVL+MQIYTS 
Sbjct: 182 DDSEGSSGISKGKYAIGIICTLAASALYSLLLSLMQLSFEKVIKKETFSVVLEMQIYTSI 241

Query: 252 VATCICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSS 311
           VA C  +VGLFASGEW+TL GEM GFGKG++SYVM +VWTAV+WQVCSVGVVGLI++VSS
Sbjct: 242 VAACASLVGLFASGEWKTLHGEMNGFGKGRISYVMTLVWTAVAWQVCSVGVVGLIFLVSS 301

Query: 312 LFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSRY 371
           LFSNVIST SLA+ P+ SV+VFHD++NGVKVIAML+A WGFASYIYQNYLDD ++ K++ 
Sbjct: 302 LFSNVISTVSLAVVPIASVMVFHDEMNGVKVIAMLLAFWGFASYIYQNYLDDRKAIKAQ- 360

Query: 372 DGETRNDP 379
            G   N P
Sbjct: 361 TGADDNHP 368

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388500174|gb|AFK38153.1| unknown [Lotus japonicus]

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 231/353 (65%), Positives = 294/353 (83%), Gaps = 3/353 (0%)

Query: 19  DNEEPMIIDKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSK 78
           D EEP+I+   +T+    F K K WQWW++V ++I FLI G++A VIL R+YY+QGG+SK
Sbjct: 2   DKEEPVILA--VTSSELPFDKYKRWQWWLMVTISITFLIIGESAVVILARFYYEQGGSSK 59

Query: 79  WLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFV-TLALVYLVLGAILAGDNMLYSV 137
           W+ATLVQTAAFPIL IPLF +P+S+E S+SS  P  +  L L+  VLG ++A DNM+YS 
Sbjct: 60  WMATLVQTAAFPILLIPLFSIPSSREASASSAPPPSIKVLVLISFVLGVLIAADNMVYST 119

Query: 138 GLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGP 197
           GLLYLSASTYSLICASQLAFNAVFSYFI+SQKFTALI+NS V+L+LSA+L+AVNE S+ P
Sbjct: 120 GLLYLSASTYSLICASQLAFNAVFSYFISSQKFTALIINSTVVLTLSASLLAVNEDSDEP 179

Query: 198 SKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCIC 257
           S +S+  YI+G + T+ ASA+YSL+L  MQLSF+KVLK+++F +VL+MQIYTS VATC C
Sbjct: 180 SGLSQGSYIVGCLVTLRASALYSLILCRMQLSFEKVLKKETFSIVLEMQIYTSLVATCAC 239

Query: 258 IVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVI 317
            +GL ASGEWR L  EM+GF KG+ SYV+ +VWTAV+WQVCSVG VGLI++VSSL+SNVI
Sbjct: 240 TIGLLASGEWRGLHREMEGFHKGEASYVLTLVWTAVAWQVCSVGAVGLIFLVSSLYSNVI 299

Query: 318 STSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSR 370
           ST SL +TP+VSVIVFHDK+NGVK+I+ML+AIWG ASYIYQNY+DD ++R ++
Sbjct: 300 STVSLTVTPIVSVIVFHDKMNGVKIISMLVAIWGLASYIYQNYIDDLKARCTQ 352

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307136271|gb|ADN34099.1| purine transmembrane transporter [Cucumis melo subsp. melo]

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/361 (64%), Positives = 301/361 (83%), Gaps = 4/361 (1%)

Query: 20  NEEPMIIDKYLT--NQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNS 77
           N++P I+DK +T  ++ PL   LK WQWW LV +NI FL+ GQAAAV+LGR+YYD+GGNS
Sbjct: 15  NQQP-ILDKEVTSVDELPL-ANLKRWQWWFLVALNILFLVVGQAAAVLLGRFYYDKGGNS 72

Query: 78  KWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSV 137
           KW+AT+VQTAAFPIL+IPLFL  ++++ S+S+  PS + L L+Y  LG+++A DN +YS 
Sbjct: 73  KWMATVVQTAAFPILFIPLFLFRSTKDTSTSTNPPSILFLLLIYFSLGSLIALDNWMYST 132

Query: 138 GLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGP 197
           GLLYLSASTYSLICASQLAFN+VFSYFINSQKFT LI NSVVILSLS+AL+AVN+ SE P
Sbjct: 133 GLLYLSASTYSLICASQLAFNSVFSYFINSQKFTILISNSVVILSLSSALLAVNDDSERP 192

Query: 198 SKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCIC 257
             VS  KY +GFIS++GASA+YSLLLSLMQL+FQKVLKR++F VVL+MQIYTS VAT + 
Sbjct: 193 PGVSNSKYFIGFISSLGASALYSLLLSLMQLTFQKVLKRETFSVVLEMQIYTSLVATIVS 252

Query: 258 IVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVI 317
           +V LFASGEW++L  EM  FG G+VSYV+ +V TAV+WQ CSVGVVGLI++VSSLFSN I
Sbjct: 253 VVALFASGEWKSLPQEMASFGTGRVSYVLTLVGTAVAWQTCSVGVVGLIFIVSSLFSNAI 312

Query: 318 STSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSRYDGETRN 377
           ST SLA+TP+ +++VFHDK+NGVK+IA+L+A+WGF +Y+YQNY+D  ++++ +   +  +
Sbjct: 313 STVSLAVTPLAALVVFHDKMNGVKIIALLLAVWGFVTYLYQNYIDQSKAQRRQNRTDEPH 372

Query: 378 D 378
           D
Sbjct: 373 D 373

Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449498969|ref|XP_004160684.1| PREDICTED: probable purine permease 11-like [Cucumis sativus]

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/362 (64%), Positives = 302/362 (83%), Gaps = 5/362 (1%)

Query: 20  NEEPMIIDKYLT--NQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNS 77
           N++P I+DK +   ++ PL   LK WQWW LV +NI FL+ GQAAAV+LGR+YYD+GGNS
Sbjct: 15  NQQP-ILDKEVASVDELPL-ANLKRWQWWFLVSLNIIFLVVGQAAAVLLGRFYYDKGGNS 72

Query: 78  KWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSV 137
           KW+AT+VQTAAFP+L+IPLFL  ++++ S+S+  PS + L L+Y  LG+++A DN +YS 
Sbjct: 73  KWMATVVQTAAFPVLFIPLFLFRSTKDTSTSTNPPSILFLLLIYFSLGSLIALDNWMYST 132

Query: 138 GLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGP 197
           GLLYLSASTYSLICASQLAFN+VFSYFINSQKFT LI NSVVILSLS+AL+AVN+ SE P
Sbjct: 133 GLLYLSASTYSLICASQLAFNSVFSYFINSQKFTILISNSVVILSLSSALLAVNDDSERP 192

Query: 198 SKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCIC 257
             VSK KY +GFIS++GASA+YSLLLSLMQL+FQKVLKR++F VVL+MQIYTS VAT + 
Sbjct: 193 PGVSKSKYFIGFISSLGASALYSLLLSLMQLTFQKVLKRETFSVVLEMQIYTSLVATIVS 252

Query: 258 IVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVI 317
           ++ LF SGEW++L  EM  FG G+VSYV+ +V TAV+WQ CSVGVVGLI++VSSLFSN I
Sbjct: 253 VIALFGSGEWKSLPQEMASFGTGRVSYVLTLVGTAVAWQTCSVGVVGLIFIVSSLFSNAI 312

Query: 318 STSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSR-YDGETR 376
           ST SLA+TP+ +++VFHDK+NGVK+IA+L+AIWGF +Y+YQNY+D+ ++++ R    E R
Sbjct: 313 STVSLAVTPLAALVVFHDKMNGVKIIALLLAIWGFVTYLYQNYIDESKAQRRRNTTAEPR 372

Query: 377 ND 378
           ++
Sbjct: 373 DE 374

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42571763|ref|NP_973972.1| purine permease 11 [Arabidopsis thaliana] gi|332193923|gb|AEE32044.1| purine permease 11 [Arabidopsis thaliana]

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/366 (68%), Positives = 315/366 (86%), Gaps = 4/366 (1%)

Query: 17  MADNEEPMII--DKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQG 74
           M+ N+EP+++  +  +   +PL  KLKSWQWWVLV VNIFFLI GQAA+V+LGR+YYD+G
Sbjct: 1   MSGNQEPILVKEESVVGIPTPLL-KLKSWQWWVLVSVNIFFLIGGQAASVLLGRFYYDEG 59

Query: 75  GNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNML 134
           GNSKW+ATLVQTAAFPILYIPL LLP+S  V SS    S   + L+Y++LG I+AGDNML
Sbjct: 60  GNSKWMATLVQTAAFPILYIPLLLLPSSASVESSESSCSLKYIVLIYVLLGVIIAGDNML 119

Query: 135 YSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGS 194
           YSVGLLYLSASTYSLICA+QLAFNAVFSYFIN+QKFTALILNSVV+LS SAALIA+N+ +
Sbjct: 120 YSVGLLYLSASTYSLICATQLAFNAVFSYFINAQKFTALILNSVVLLSFSAALIALNDDA 179

Query: 195 EGPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVAT 254
           + PS VS+ KYI+GF+ T+ ASA+YSLLLSLMQ SF+K+LKR++F VVL+MQIYTS VAT
Sbjct: 180 DTPSGVSRSKYIVGFVCTLAASALYSLLLSLMQFSFEKILKRETFSVVLEMQIYTSLVAT 239

Query: 255 CICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFS 314
           C+ ++GLFASGEWRTL GEM+G+ KG+ SYV+ +VWTAV+WQVCSVGVVGLI++V+SLFS
Sbjct: 240 CVSVIGLFASGEWRTLHGEMEGYHKGQASYVLTLVWTAVTWQVCSVGVVGLIFLVTSLFS 299

Query: 315 NVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSRYDGE 374
           NVIST SLA+TP+ +++VF DK++GVK++AML+AIWGFASY+YQN++DD + R++R   +
Sbjct: 300 NVISTLSLAVTPLAALVVFRDKMSGVKIMAMLIAIWGFASYVYQNHIDDLKVRQARQQAQ 359

Query: 375 T-RNDP 379
             R +P
Sbjct: 360 AGRVEP 365

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	379
TAIR|locus:2194814	379	PUP11 "AT1G44750" [Arabidopsis	0.952	0.952	0.580	2.9e-112
TAIR|locus:2138203	361	ATPUP13 "AT4G08700" [Arabidops	0.920	0.966	0.502	8.6e-88
TAIR|locus:2163026	358	PUP12 "AT5G41160" [Arabidopsis	0.875	0.927	0.518	8.9e-86
TAIR|locus:2141907	390	PUP10 "AT4G18210" [Arabidopsis	0.889	0.864	0.486	5.8e-82
TAIR|locus:1009023376	394	PUP8 "AT4G18195" [Arabidopsis	0.868	0.835	0.436	1.6e-72
TAIR|locus:2141887	387	PUP6 "AT4G18190" [Arabidopsis	0.868	0.850	0.445	1.4e-71
TAIR|locus:1009023365	377	AT4G18205 "AT4G18205" [Arabido	0.905	0.909	0.423	1.2e-67
TAIR|locus:1009023346	390	PUP7 "AT4G18197" [Arabidopsis	0.923	0.897	0.405	6.5e-67
TAIR|locus:2057666	358	PUP2 "AT2G33750" [Arabidopsis	0.820	0.868	0.302	5.2e-42
TAIR|locus:2032159	351	PUP3 "AT1G28220" [Arabidopsis	0.817	0.883	0.304	2.8e-41

TAIR|locus:2194814 PUP11 "AT1G44750" [Arabidopsis thaliana (taxid:3702)]

 Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
 Identities = 212/365 (58%), Positives = 275/365 (75%)

Query:    18 ADNEEPMII--DKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGG 75
             A N+EP+++  +  +   +PL  KLKSWQWWVLV VNIFFLI GQAA+V+LGR+YYD+GG
Sbjct:    14 AGNQEPILVKEESVVGIPTPLL-KLKSWQWWVLVSVNIFFLIGGQAASVLLGRFYYDEGG 72

Query:    76 NSKWLATLVQTAAXXXXXXXXXXXXASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLY 135
             NSKW+ATLVQTAA            +S  V SS    S   + L+Y++LG I+AGDNMLY
Sbjct:    73 NSKWMATLVQTAAFPILYIPLLLLPSSASVESSESSCSLKYIVLIYVLLGVIIAGDNMLY 132

Query:   136 SVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTXXXXXXXXXXXXXXXXXXXXEGSE 195
             SVGLLYLSASTYSLICA+QLAFNAVFSYFIN+QKFT                    + ++
Sbjct:   133 SVGLLYLSASTYSLICATQLAFNAVFSYFINAQKFTALILNSVVLLSFSAALIALNDDAD 192

Query:   196 GPSKVSKWKYILGFISTVGASAIYXXXXXXXXXXFQKVLKRQSFGVVLDMQIYTSFVATC 255
              PS VS+ KYI+GF+ T+ ASA+Y          F+K+LKR++F VVL+MQIYTS VATC
Sbjct:   193 TPSGVSRSKYIVGFVCTLAASALYSLLLSLMQFSFEKILKRETFSVVLEMQIYTSLVATC 252

Query:   256 ICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSN 315
             + ++GLFASGEWRTL GEM+G+ KG+ SYV+ +VWTAV+WQVCSVGVVGLI++V+SLFSN
Sbjct:   253 VSVIGLFASGEWRTLHGEMEGYHKGQASYVLTLVWTAVTWQVCSVGVVGLIFLVTSLFSN 312

Query:   316 VISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSRYDGET 375
             VIST SLA+TP+ +++VF DK++GVK++AML+AIWGFASY+YQN++DD + R++R   + 
Sbjct:   313 VISTLSLAVTPLAALVVFRDKMSGVKIMAMLIAIWGFASYVYQNHIDDLKVRQARQQAQA 372

Query:   376 -RNDP 379
              R +P
Sbjct:   373 GRVEP 377

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0009507 "chloroplast" evidence=ISM

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0006863 "purine nucleobase transport" evidence=RCA;TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:2138203 ATPUP13 "AT4G08700" [Arabidopsis thaliana (taxid:3702)]

 Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
 Identities = 180/358 (50%), Positives = 234/358 (65%)

Query:    19 DNEEPMIIDKY------LTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYD 72
             D EE M++ K        T+      KLK   WW+LV ++IFFLI+ QA AV+LGR+YY+
Sbjct:     2 DEEEAMLLLKEEDEGTRRTSVPTQLMKLKRTHWWILVFISIFFLISAQAIAVLLGRFYYN 61

Query:    73 QGGNSKWLATLVQTAAXXXXXXXXXXXXASQEVSSSSRYPSFVTLALVYLVLGAILAGDN 132
             +GGNSKW++TLVQT              AS   SSS    SF TL  +YL LG  +  DN
Sbjct:    62 EGGNSKWISTLVQTCGFPILYLPLCFLPASHSSSSSC---SFKTLVWIYLSLGFAIGLDN 118

Query:   133 MLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTXXXXXXXXXXXXXXXXXXXXE 192
             +LYS GLLYLSASTYS++C+SQLAFN VFSY+INSQK T                    +
Sbjct:   119 LLYSFGLLYLSASTYSILCSSQLAFNGVFSYYINSQKITCLILFSVLFLSVSAVLVSLDD 178

Query:   193 GSEGPSKVSKWKYILGFISTVGASAIYXXXXXXXXXXFQKVLKRQSFGVVLDMQIYTSFV 252
              S  PS  SKW Y++G + TV AS IY          F+ VLK ++F +VL+MQIYTS V
Sbjct:   179 DSNSPSGDSKWSYLIGCLCTVFASLIYSLQLSLMQFSFENVLKSETFSMVLEMQIYTSLV 238

Query:   253 ATCICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSL 312
             A+C+ ++GLFASGEW  LS EM+ F +G+V YV+ +V TAVSWQ+ SVG V LI++VSSL
Sbjct:   239 ASCVAVIGLFASGEWMLLSVEMEEFHEGQVIYVLTLVGTAVSWQLGSVGAVALIFLVSSL 298

Query:   313 FSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSR 370
             FSN+I T SL +TP+ ++ VFHDK+  VK++AML+A  GF  YIYQNYLDD + +++R
Sbjct:   299 FSNLIGTLSLIVTPLAAIAVFHDKLTEVKMVAMLIAFMGFGFYIYQNYLDDLKVQRAR 356

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:2163026 PUP12 "AT5G41160" [Arabidopsis thaliana (taxid:3702)]

 Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
 Identities = 172/332 (51%), Positives = 221/332 (66%)

Query:    39 KLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAXXXXXXXXXX 98
             KL   QWW+LV ++IFFLI+ QA +V+LGR+YY++GGNSKW++TLVQT            
Sbjct:    22 KLNRSQWWILVFISIFFLISAQAISVLLGRFYYNEGGNSKWISTLVQTGGFPILYLPLSL 81

Query:    99 XXASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFN 158
               ASQ  SSSS   SF TL  +YL LG  +  DN LYSVGLLYLSASTYS++CASQLAFN
Sbjct:    82 LPASQSSSSSSSSSSFKTLVWIYLSLGFAIGLDNFLYSVGLLYLSASTYSILCASQLAFN 141

Query:   159 AVFSYFINSQKFTXXXXXXXXXXXXXXXXXXXXEGSEGPSKVSKWKYILGFISTVGASAI 218
              VF Y+INSQK T                    + S  PS  SKW Y++G    V AS I
Sbjct:   142 GVFYYYINSQKITCLIFFSVLFLSISAVLVSLDDDSNSPSGDSKWSYLIGCFCAVFASLI 201

Query:   219 YXXXXXXXXXXFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFG 278
             Y          F+KVLK ++  +VL+MQIYTS VA+C+ ++GLFASGEW  LS EM+ F 
Sbjct:   202 YSLQLSLMQFSFEKVLKSETLSMVLEMQIYTSLVASCVAVIGLFASGEWMLLSVEMEEFQ 261

Query:   279 KGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVN 338
             +G+V YV+ +V  AVS Q+  VG V LI++VSSLFSN+IST SL +TP+ ++ VFHDK+ 
Sbjct:   262 EGQVIYVLTLVGAAVSCQLGCVGAVSLIFLVSSLFSNLISTLSLIVTPLAAIAVFHDKLT 321

Query:   339 GVKVIAMLMAIWGFASYIYQNYLDDYRSRKSR 370
              VK++AM +A  GF  YIYQNYLDD + +++R
Sbjct:   322 EVKMVAMPIAFTGFTFYIYQNYLDDLKVQRAR 353

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0005739 "mitochondrion" evidence=ISM

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:2141907 PUP10 "AT4G18210" [Arabidopsis thaliana (taxid:3702)]

 Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
 Identities = 165/339 (48%), Positives = 214/339 (63%)

Query:    42 SWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAXXXXXXXXXXXXA 101
             +++ W+ V +  FF+I+GQ  A ILGR YYD GGNSKWLAT+VQ                
Sbjct:    40 TYKRWLRVTLYTFFVISGQTVATILGRVYYDNGGNSKWLATVVQLVGFPVLLPYYILSFK 99

Query:   102 SQEVSS-SSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAV 160
             +   +    +  S     LVY+VLG ++  D  LYS+GLLYL  STYSLICASQLAFNA 
Sbjct:   100 THATTDRDGKRTSPRNRVLVYVVLGLLVGADCYLYSIGLLYLPVSTYSLICASQLAFNAF 159

Query:   161 FSYFINSQKFTXXXXXXXXXXXXXXXXXXXXEGSEGPSKVSKWKYILGFISTVGASAIYX 220
             FSYF+NSQK T                          +KV+K +Y+ GFI TV ASA Y 
Sbjct:   160 FSYFLNSQKLTPIILNSLFLLTISSTLLAFNNEETDSTKVTKGEYVKGFICTVAASAGYG 219

Query:   221 XXXXXXXXXFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKG 280
                      F KVLK+Q+F  V+DM IY S VA+C+ +VGLFAS EW+TLS EM  +  G
Sbjct:   220 LVLSLQQLAFLKVLKKQNFSEVMDMIIYVSLVASCVSVVGLFASSEWKTLSSEMDNYKHG 279

Query:   281 KVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGV 340
             KVSY+M +VWTAV+WQV S+G  GLI+ +SSLFSN IS   L + P+++VI+FHDK+NG+
Sbjct:   280 KVSYIMNLVWTAVTWQVFSIGGTGLIFELSSLFSNAISVLGLPVVPILAVIIFHDKMNGL 339

Query:   341 KVIAMLMAIWGFASYIYQNYLDDYRSRKSRYDGETRNDP 379
             KVI+M++AIWGF SY+YQ YLDD ++ K  ++  T   P
Sbjct:   340 KVISMILAIWGFTSYVYQQYLDD-KNLKKNHEITTTESP 377

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0005737 "cytoplasm" evidence=ISM

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

GO:0009624 "response to nematode" evidence=IEP

TAIR|locus:1009023376 PUP8 "AT4G18195" [Arabidopsis thaliana (taxid:3702)]

 Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
 Identities = 145/332 (43%), Positives = 207/332 (62%)

Query:    41 KSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAXXXXXXXXXXXX 100
             K+++ W+ + + +FF++A QA + ILGR YY+ GG S W+ TLVQ               
Sbjct:    40 KNYKKWLRISIYVFFVLACQALSTILGRVYYENGGKSTWMGTLVQLIGFPVLFLFRFFSQ 99

Query:   101 ASQEVSSSS---RYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAF 157
                   + +   ++ SF  L  VY+V G +++ ++ + SVGLLYL  ST+SLI ASQLAF
Sbjct:   100 TKNPKPTEADFRKFSSFTILGSVYIVTGLLVSANSYMSSVGLLYLPVSTFSLILASQLAF 159

Query:   158 NAVFSYFINSQKFTXXXXXXXXXXXXXXXXXXXXEGSEGPSKVSKWKYILGFISTVGASA 217
              A FSYF+NSQKFT                      SE  +KVS+ KY++G I T+GASA
Sbjct:   160 TAFFSYFLNSQKFTPFIVNSLFLLTISSALLVVNTDSENTAKVSRVKYVIGIICTIGASA 219

Query:   218 IYXXXXXXXXXXFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGF 277
                          +KVLK+Q+F  V D+  Y S VA+C+ ++GLFASGEW+TL+ EM+ +
Sbjct:   220 GIGLLLSLVQLILRKVLKKQTFSTVTDLVAYQSLVASCVVLIGLFASGEWKTLTSEMENY 279

Query:   278 GKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKV 337
               GKV YVM +   A+SWQV ++GVVGLI+  SS+FSN I+   L I PVV+VIVFHDK+
Sbjct:   280 KLGKVPYVMTLASIAISWQVYTIGVVGLIFESSSVFSNSITAVGLPIVPVVAVIVFHDKM 339

Query:   338 NGVKVIAMLMAIWGFASYIYQNYLDDYRSRKS 369
             N  K+ ++++AIWGF S++YQ+YLD+ + + S
Sbjct:   340 NASKIFSIILAIWGFISFVYQHYLDEKKLKTS 371

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0015931 "nucleobase-containing compound transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:2141887 PUP6 "AT4G18190" [Arabidopsis thaliana (taxid:3702)]

 Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
 Identities = 151/339 (44%), Positives = 205/339 (60%)

Query:    43 WQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAXXXXXXXXXXXX-- 100
             + W + V + +  L+AG+  A +LGR YY++GG S WL TLVQ                 
Sbjct:    32 YSWRLRVSLYVTLLLAGETIATLLGRLYYEKGGKSTWLETLVQLVGFPLTLPCYYYLKPE 91

Query:   101 -ASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNA 159
              +  +  +     SF+TL+LVY+ LG ++AG  +LYS GLLYL  ST+SLI ASQLAFNA
Sbjct:    92 PSKTKTITKKTTSSFLTLSLVYIGLGLLVAGHCILYSFGLLYLPVSTFSLISASQLAFNA 151

Query:   160 VFSYFINSQKFTXXXXXXXXXXXXXXXXXXXXEGSEGPSKVSKW----KYILGFISTVGA 215
             VFSYF+NSQK T                       E PS  SK     KY++G+I  VG+
Sbjct:   152 VFSYFLNSQKITPFILNSLVLLTISSTLLVIQHEPESPSSTSKSAAKSKYVIGYICAVGS 211

Query:   216 SAIYXXXXXXXXXXFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQ 275
             SA Y          F+K+LK+ +F  +LDM  Y S VATC+ +VGLF SG W+ LS EM+
Sbjct:   212 SAGYSLVLSLTDYAFEKILKKYTFKAILDMATYPSMVATCVVVVGLFGSGGWKKLSTEME 271

Query:   276 GFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHD 335
              F  GK SY+++ + + +SWQ C +G VGLI  VSSLFSNVIST  L + PV++V+ F D
Sbjct:   272 EFQLGKSSYILINIGSTISWQACLIGSVGLIIEVSSLFSNVISTLCLPVVPVLAVVFFRD 331

Query:   336 KVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSRYDGE 374
             +++G+K++AM +AIWGF SY YQ+Y++D   RK   D E
Sbjct:   332 EMSGIKLVAMFLAIWGFVSYGYQHYVND---RKPEEDQE 367

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:1009023365 AT4G18205 "AT4G18205" [Arabidopsis thaliana (taxid:3702)]

 Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
 Identities = 147/347 (42%), Positives = 205/347 (59%)

Query:    20 NEEPMIIDKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKW 79
             N E  ++D   T +S    + K+ + W+ V +   F+I  Q  A +LGR YY+ GG S +
Sbjct:    14 NLEANLLDHEET-ESFSVPQTKNCKRWLRVSIYAIFVIFCQPLATVLGRLYYENGGKSTY 72

Query:    80 LATLVQTAAXXXXXXXXXXXXASQEVSSSSRY---PSFVTLALVYLVLGAILAGDNMLYS 136
             + TL+Q                 Q  S+ + +   PSF TLA VYL  G +++    L +
Sbjct:    73 VVTLLQLIGFPVLILFRFFSRIRQPKSTDTNFSQSPSFTTLASVYLCTGLLVSAYAYLSA 132

Query:   137 VGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTXXXXXXXXXXXXXXXXXXXXEGSEG 196
             VGLLYL  ST+SLI ASQLAF A FSYF+NSQKFT                      SE 
Sbjct:   133 VGLLYLPVSTFSLILASQLAFTAFFSYFLNSQKFTPLIVNSLFLLTVSSALLVVNTDSEN 192

Query:   197 PSKVSKWKYILGFISTVGASAIYXXXXXXXXXXFQKVLKRQSFGVVLDMQIYTSFVATCI 256
              + VS+ +Y++GFI T+GASA            F+KV  + +   VLD+  Y S VATC+
Sbjct:   193 TTNVSRVQYVIGFICTIGASAGIGLVLSLIQLLFRKVFTKHTSSAVLDLANYQSLVATCV 252

Query:   257 CIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNV 316
              ++GLFASGEWRTL  EM+ +  GKVSY++ +   A+ WQV +VG VGLI+  SS+FSN 
Sbjct:   253 VLIGLFASGEWRTLPSEMRNYKLGKVSYILTLASAAIFWQVYTVGCVGLIFESSSVFSNS 312

Query:   317 ISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDD 363
             I+   L I PVV+VIVFHDK++  K+ ++++AIWGF S++YQ+YLD+
Sbjct:   313 ITAVGLPIVPVVAVIVFHDKMDASKIFSIILAIWGFLSFVYQHYLDE 359

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:1009023346 PUP7 "AT4G18197" [Arabidopsis thaliana (taxid:3702)]

 Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
 Identities = 144/355 (40%), Positives = 209/355 (58%)

Query:    20 NEEPMIIDKYLTNQSP--LFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNS 77
             N E  +ID  +  +S      + ++++ W+ V + + F++  Q  A ILGR YY+ GGNS
Sbjct:    14 NLEANLIDHEVVTESSSSAVPQTENYKRWLRVSIYVIFVLFCQPLATILGRLYYENGGNS 73

Query:    78 KWLATLVQTAAXXXXXXXXXXXXASQEVSSSSRY---PSFVTLALVYLVLGAILAGDNML 134
              ++ TL+Q                 Q  S+ + +   PSF TLA VYL  G +++    L
Sbjct:    74 TYVVTLLQLIGFPVLVLFRFFSRIRQPKSTDTNFSQSPSFTTLASVYLCTGLLVSAYAYL 133

Query:   135 YSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTXXXXXXXXXXXXXXXXXXXXEGS 194
              +VGLLYL  ST+SLI ASQLAF A FSYF+NSQKFT                      S
Sbjct:   134 SAVGLLYLPVSTFSLILASQLAFTAFFSYFLNSQKFTPLIVSSLLLLTVSSALLVVNTDS 193

Query:   195 EGPSKVSKWKYILGFISTVGASAIYXXXXXXXXXXFQKVLKRQSFGVVLDMQIYTSFVAT 254
             E  + VS+ +Y++GFI T+GASA            F+KV  + +   V D+ IY S VA+
Sbjct:   194 ENSTNVSRVQYVIGFICTIGASAGIGLLLSLIQMLFRKVFTKHTSSAVTDLAIYQSLVAS 253

Query:   255 CICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFS 314
             C+ ++GLFASGEW TL  EM+ +  GKVSYV+ +   A+SWQV ++G+VGLI+  SS+FS
Sbjct:   254 CVVLIGLFASGEWETLPSEMRNYKLGKVSYVLTLASAAISWQVYTLGLVGLIFESSSVFS 313

Query:   315 NVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKS 369
             N I+   L I PV +VIVFHD+++  K+ ++++AI GF S++YQ+YLD+ +   S
Sbjct:   314 NSITAVGLPIVPVAAVIVFHDRMDASKIFSIILAICGFLSFVYQHYLDEKKLNTS 368

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0015931 "nucleobase-containing compound transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:2057666 PUP2 "AT2G33750" [Arabidopsis thaliana (taxid:3702)]

 Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
 Identities = 99/327 (30%), Positives = 167/327 (51%)

Query:    47 VLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAXXXXXXXXXXXXASQE-- 104
             VLV++N  FL  G     ++ R Y+  GG   W  + +QT                +   
Sbjct:     6 VLVIINCIFLAIGNCGGPLMMRLYFQNGGERIWFPSFLQTVGCPLIFFPLLLSFLRRRRC 65

Query:   105 VSSSSRYPSFVT---LALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVF 161
             +      P F+    L +  +V+G ++  DN LYS GL Y+  ST SLI ++QL F A+F
Sbjct:    66 LEEQETTPFFLMKPPLFIAAIVVGLLVGFDNYLYSYGLAYIPVSTASLIISAQLGFTALF 125

Query:   162 SYFINSQKFTXXXXXXXXXXXXXXXXXXXXEGSEGPSKVSKWKYILGFISTVGASAIYXX 221
             ++F+  QKFT                      S+  +  +  +Y++GFI T+GA+ +Y  
Sbjct:   126 AFFMVKQKFTPFTINAIVLLTGGAVVLALNSDSDKLANETHKEYVVGFIMTLGAALLYGF 185

Query:   222 XXXXXXXXFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEW-----------RTL 270
                     ++K  +R ++ + L+ Q+   F ATC+C+VG+ A+G++           R +
Sbjct:   186 ILPLVELSYKKSGQRITYTLALEFQMVLCFAATCVCLVGMLAAGDFKVKHALFIFKNRVI 245

Query:   271 SGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSV 330
             +GE + F  G+  Y +VIV+TA+ WQ   VG +GLI+  SSL S ++ ++ L +T +++V
Sbjct:   246 AGEARDFKLGESLYYVVIVFTAIIWQAFFVGAIGLIFCASSLVSGIMVSALLPVTVILAV 305

Query:   331 IVFHDKVNGVKVIAMLMAIWGFASYIY 357
             I F +K    K +A+ +++WG  SY Y
Sbjct:   306 ICFQEKFQAGKGVALALSLWGSVSYFY 332

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0016020 "membrane" evidence=IEA;TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

TAIR|locus:2032159 PUP3 "AT1G28220" [Arabidopsis thaliana (taxid:3702)]

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 96/315 (30%), Positives = 162/315 (51%)

Query:    48 LVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAXXXXXX----XXXXXXASQ 103
             LV++N   L  G     ++ R Y++ GG   W +T ++TA                  S 
Sbjct:     5 LVIINCIILAIGNCGGPLIMRLYFNNGGKRIWFSTFLETAGFPVIFIPLLFSYITRRRSN 64

Query:   104 EVSSSSRYPSFVTLALVYLVLGAILAG-DNMLYSVGLLYLSASTYSLICASQLAFNAVFS 162
              V  S+ +       L+  V+  IL+G DN LY+ G+ YL  ST +LI ASQLAF A+FS
Sbjct:    65 NVGDSTSFFLIKPRLLIAAVIVGILSGFDNYLYAYGIAYLPVSTAALIIASQLAFIAIFS 124

Query:   163 YFINSQKFTXXXXXXXXXXXXXXXXXXXXEGSEGPSKVSKWKYILGFISTVGASAIYXXX 222
             +F+   KFT                      ++ P   +  +YI GF+ TV A+ +Y   
Sbjct:   125 FFMVKHKFTPFTINAVVLLTVGAAVLGMHTETDKPVHETHKQYITGFLITVAAAVMYAFI 184

Query:   223 XXXXXXXFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGKV 282
                    +QK  +  S+ +VL+ Q+    +A+ + ++G+F +G+++ L  E + F  G+ 
Sbjct:   185 LPLVELAYQKAKQTMSYTLVLEFQLILCLLASIVSVIGMFIAGDFKALPKEAREFKLGEA 244

Query:   283 SYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKV 342
              + +V V++A+ WQ   +G +GLI+  SSL S ++ +  L IT V++VI +H+K    K 
Sbjct:   245 LFYVVAVFSAIIWQGFFLGAIGLIFSTSSLVSGIMISVLLPITEVLAVIFYHEKFQAEKG 304

Query:   343 IAMLMAIWGFASYIY 357
             +++ +++WGF SY Y
Sbjct:   305 LSLALSLWGFVSYFY 319

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0009507 "chloroplast" evidence=ISM

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0016020 "membrane" evidence=IEA;TAS

GO:0006863 "purine nucleobase transport" evidence=RCA;TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LPF6	PUP11_ARATH	No assigned EC number	0.6821	0.9525	0.9525	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00400155 hypothetical protein (368 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	379
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	1e-35

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score =  127 bits (321), Expect = 1e-35
 Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 3/151 (1%)

Query: 208 GFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEW 267
           GFI  + ASA+++L L L Q   +K  K+ +   VL++  Y S VA  + + GL  S  +
Sbjct: 1   GFILALAASALFALRLILSQKLLKK--KKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGF 58

Query: 268 RTL-SGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITP 326
           +                YV++++ + V   + ++   GL+   S L S+V  T    +  
Sbjct: 59  KLGKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVI 118

Query: 327 VVSVIVFHDKVNGVKVIAMLMAIWGFASYIY 357
           V+SVI+F D V  + ++ + +AI G   Y Y
Sbjct: 119 VLSVIIFGDPVTFLNILGLAIAILGVVLYSY 149

This family includes transporters with a specificity for triose phosphate. Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	379
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.96
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.9
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.89
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.88
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.86
PLN00411	358	nodulin MtN21 family protein; Provisional	99.84
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.83
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.82
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.76
PRK11272	292	putative DMT superfamily transporter inner membran	99.72
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.72
KOG2765	416	consensus Predicted membrane protein [Function unk	99.71
PRK15430	296	putative chloramphenical resistance permease RarD;	99.69
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.62
PRK11689	295	aromatic amino acid exporter; Provisional	99.6
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.6
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.54
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.5
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.4
COG2962	293	RarD Predicted permeases [General function predict	99.4
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.35
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.35
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.33
KOG1582	367	consensus UDP-galactose transporter related protei	99.29
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.29
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.29
KOG1580	337	consensus UDP-galactose transporter related protei	99.22
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.14
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.03
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	98.97
KOG1581	327	consensus UDP-galactose transporter related protei	98.87
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.78
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.77
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.63
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.58
KOG2766	336	consensus Predicted membrane protein [Function unk	98.38
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.27
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.2
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.14
PLN00411	358	nodulin MtN21 family protein; Provisional	98.13
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	98.07
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.02
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.99
COG2510	140	Predicted membrane protein [Function unknown]	97.97
PRK11689	295	aromatic amino acid exporter; Provisional	97.87
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.83
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.82
PRK15430	296	putative chloramphenical resistance permease RarD;	97.72
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.67
PRK11272	292	putative DMT superfamily transporter inner membran	97.62
PRK13499	345	rhamnose-proton symporter; Provisional	97.56
COG2510	140	Predicted membrane protein [Function unknown]	97.49
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.48
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.44
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.38
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	97.36
COG2076	106	EmrE Membrane transporters of cations and cationic	97.33
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.25
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	97.24
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.19
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.19
PRK11431	105	multidrug efflux system protein; Provisional	97.17
PF13536	113	EmrE: Multidrug resistance efflux transporter	96.99
COG0697	292	RhaT Permeases of the drug/metabolite transporter	96.95
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	96.76
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.53
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.2
PRK13499	345	rhamnose-proton symporter; Provisional	96.19
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	96.14
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	95.88
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.79
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.64
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	95.48
COG2962	293	RarD Predicted permeases [General function predict	95.48
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	95.07
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	94.71
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	94.56
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	93.86
COG2076	106	EmrE Membrane transporters of cations and cationic	93.13
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	93.04
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	92.92
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	92.04
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	91.98
PRK09541	110	emrE multidrug efflux protein; Reviewed	91.52
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	91.43
PRK10650	109	multidrug efflux system protein MdtI; Provisional	91.4
KOG1580	337	consensus UDP-galactose transporter related protei	90.41
PRK11431	105	multidrug efflux system protein; Provisional	89.79
KOG2765	416	consensus Predicted membrane protein [Function unk	88.52
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	86.06
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	86.01
KOG4510	346	consensus Permease of the drug/metabolite transpor	81.26

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.96  E-value=3.6e-27  Score=229.30  Aligned_cols=295  Identities=21%  Similarity=0.235  Sum_probs=231.6

Q ss_pred             HHHHHHHHhHhHHHHHHHHHhcCCCchhhHHHHHhchhhHhhhhhhcccccc----CC------CCCCCCChhHHHHHHH
Q 017017           52 NIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAFPILYIPLFLLPASQ----EV------SSSSRYPSFVTLALVY  121 (379)
Q Consensus        52 ~~~~l~~g~~~~~ll~r~y~~~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~----~~------~~~~~~p~~~~~~~~~  121 (379)
                      +.+.+.+..++-+++.||....+|.++.-+|.|..+|.-++.++.++.+++.    ++      ++....|  +-.+..+
T Consensus        19 ~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~lk~~   96 (345)
T KOG2234|consen   19 SLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAP--RETLKVS   96 (345)
T ss_pred             HHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhCh--HHHHHHH
Confidence            3347888889999999999999999999999999999999999998766542    10      1111122  1334456


Q ss_pred             HHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCC--Cc
Q 017017          122 LVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGP--SK  199 (379)
Q Consensus       122 ~~~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~--~~  199 (379)
                      ++..++..+||+.| .+++|+|++||++.+|+++.+|++|+.++++||++++||.+++++++|+++++.+..+..+  +.
T Consensus        97 vPa~iYalqNnl~y-val~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~  175 (345)
T KOG2234|consen   97 VPALIYALQNNLQY-VALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSE  175 (345)
T ss_pred             HHHHHHHHhhhHHH-HHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCC
Confidence            77777767776555 9999999999999999999999999999999999999999999999999999854433222  13


Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-hhhHHHHHHHHHHHHHHHHHHHHhhccccchhcccccccc
Q 017017          200 VSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQS-FGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFG  278 (379)
Q Consensus       200 ~~~~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~-~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e~~~f~  278 (379)
                      ....+.+.|+..++.+|.++|+    .+++|||++|+.. ..|+.++|++.  ++.++.+++++.. |++.+.  ..+|+
T Consensus       176 ~~~~n~~~G~~avl~~c~~Sgf----AgvYfEkiLK~s~~s~wi~NiqL~~--~g~~f~~l~~~~~-d~~~i~--~~gff  246 (345)
T KOG2234|consen  176 SSAQNPFLGLVAVLVACFLSGF----AGVYFEKILKGSNVSLWIRNIQLYF--FGILFNLLTILLQ-DGEAIN--EYGFF  246 (345)
T ss_pred             CcccchhhhHHHHHHHHHHHHH----HHHHHHHHHhcCCchHHHHHHHHHH--HHHHHHHHHHhhc-cccccc--cCCcc
Confidence            4467789999999999999999    8888999988654 45888888655  7778888887766 566665  35666


Q ss_pred             ccchHHHHHHHHHHHHHHHHH-hhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHh
Q 017017          279 KGKVSYVMVIVWTAVSWQVCS-VGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIY  357 (379)
Q Consensus       279 ~g~~~y~l~lv~~av~~q~~~-~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y  357 (379)
                      +|.    -..+|..+..++.+ +-+.-+.+++|++++++..++.+.++.+.++.+||-++|..-..|..+++.....|.+
T Consensus       247 ~G~----s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~  322 (345)
T KOG2234|consen  247 YGY----SSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSL  322 (345)
T ss_pred             ccc----cHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhc
Confidence            664    34555655555533 4455577899999999999999999999999999999999999999999866666665


Q ss_pred             ccccc
Q 017017          358 QNYLD  362 (379)
Q Consensus       358 ~~~~~  362 (379)
                      .+++|
T Consensus       323 ~P~~~  327 (345)
T KOG2234|consen  323 YPARD  327 (345)
T ss_pred             CCccc
Confidence            55555

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.90  E-value=4.4e-21  Score=189.14  Aligned_cols=284  Identities=16%  Similarity=0.200  Sum_probs=188.1

Q ss_pred             HHHHHHHHhcCCCchhhHHHHHhchhhHhhhhhhccccccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 017017           64 VILGRYYYDQGGNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLS  143 (379)
Q Consensus        64 ~ll~r~y~~~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~Gl~~~~~nlly~~gL~ylp  143 (379)
                      .....+--++|=+-+..+|+.--.--.+...|..+.++ ++++-.  .. .++-+..|+.++++-...|++...|++|++
T Consensus        29 ~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~-~~~~~~--~~-~~~~~w~y~lla~~Dv~aN~~~v~a~~yTs  104 (334)
T PF06027_consen   29 GTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRR-GFKKWL--KV-LKRPWWKYFLLALLDVEANYLVVLAYQYTS  104 (334)
T ss_pred             HHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhcc-ccccch--hh-cchhHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            33444444445566778887665443333333333221 111100  01 112233466778999999999999999999


Q ss_pred             hhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCccchhhhHHHHHHHHHHHHHHHHHH
Q 017017          144 ASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWKYILGFISTVGASAIYSLLL  223 (379)
Q Consensus       144 ~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~~~~~~~~G~ll~L~Aa~~~al~l  223 (379)
                      +++.+++.++..+|+++++++++|+|+++.|+.|+++.++|++++...|...+.++.+..+...|++++++||++||++-
T Consensus       105 vtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~n  184 (334)
T PF06027_consen  105 VTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSN  184 (334)
T ss_pred             HhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998877654322222334567999999999999999966


Q ss_pred             HHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhhccccchhccccccccccchHHHHHHHHHHHHHHHHHhhhh
Q 017017          224 SLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVV  303 (379)
Q Consensus       224 ~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e~~~f~~g~~~y~l~lv~~av~~q~~~~gv~  303 (379)
                      ++.    |+..|+.+   ..|+..+.++++.+++.+-..+- |++++..  -.| .++.  ...+++-+++..+....+.
T Consensus       185 V~~----E~~v~~~~---~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~--~~w-~~~~--~~~~v~~~~~lf~~y~l~p  251 (334)
T PF06027_consen  185 VLE----EKLVKKAP---RVEFLGMLGLFGFIISGIQLAIL-ERSGIES--IHW-TSQV--IGLLVGYALCLFLFYSLVP  251 (334)
T ss_pred             HHH----HHhcccCC---HHHHHHHHHHHHHHHHHHHHHhe-ehhhhhc--cCC-Chhh--HHHHHHHHHHHHHHHHHHH
Confidence            665    44444333   35666777888887777543322 3334421  122 1221  1122223333333322222


Q ss_pred             hhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHhccccccc
Q 017017          304 GLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDY  364 (379)
Q Consensus       304 glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y~~~~~~~  364 (379)
                      -+...+++...|+-....-|.+.++.+++||+++++..++|.++++.|+..|...+.++++
T Consensus       252 ~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~  312 (334)
T PF06027_consen  252 IVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEE  312 (334)
T ss_pred             HHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccc
Confidence            2344556666655555556889999999999999999999999999999999887655543

Some of the sequences in this family are annotated as putative membrane proteins.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.89  E-value=2.2e-20  Score=182.26  Aligned_cols=279  Identities=18%  Similarity=0.238  Sum_probs=206.4

Q ss_pred             HHHHHHhcCCC-chhhHHHHHhchhhHhhhhhhccccccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccCCh
Q 017017           66 LGRYYYDQGGN-SKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSA  144 (379)
Q Consensus        66 l~r~y~~~~g~-~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~Gl~~~~~nlly~~gL~ylp~  144 (379)
                      .++....+.++ ..|..|++|.+...+...+......+   +..++.| .++.+..    +++....+.+-..+++|+|.
T Consensus        19 qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~----~~~~~~~~~~~~~al~~i~~   90 (303)
T PF08449_consen   19 QEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF---PKSRKIP-LKKYAIL----SFLFFLASVLSNAALKYISY   90 (303)
T ss_pred             HHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc---cCCCcCh-HHHHHHH----HHHHHHHHHHHHHHHHhCCh
Confidence            55555555555 79999999988888765554433221   1112234 3344434    66677777777789999999


Q ss_pred             hHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCcc-chhhhHHHHHHHHHHHHHHHHHH
Q 017017          145 STYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKV-SKWKYILGFISTVGASAIYSLLL  223 (379)
Q Consensus       145 st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~-~~~~~~~G~ll~L~Aa~~~al~l  223 (379)
                      +++.++++++++++++++++++|||++++++.++++.++|+++...++.++++... +......|+++.+.+.++.|+..
T Consensus        91 p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~  170 (303)
T PF08449_consen   91 PTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTG  170 (303)
T ss_pred             HHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998776654432222 22223449999999999999999


Q ss_pred             HHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhh--ccccchhccccccccccchHHHHHHHHHHHHHHHHHhh
Q 017017          224 SLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFA--SGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVG  301 (379)
Q Consensus       224 ~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~--~g~~~~l~~e~~~f~~g~~~y~l~lv~~av~~q~~~~g  301 (379)
                      ...|+.++++. ..    ..|+.++..+++.+...+....  .+|+.+-.    .+....+..+..+....++-.++..+
T Consensus       171 ~~qe~~~~~~~-~~----~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~----~f~~~~p~~~~~l~~~s~~~~~g~~~  241 (303)
T PF08449_consen  171 VYQEKLFKKYG-KS----PWELMFYTNLFSLPFLLILLFLLPTGEFRSAI----RFISAHPSVLLYLLLFSLTGALGQFF  241 (303)
T ss_pred             HHHHHHHHHhC-Cc----HHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHH----HHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            99888888762 22    3788899999988888877666  55543221    11111112222334444444444455


Q ss_pred             hhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHhcccc
Q 017017          302 VVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYL  361 (379)
Q Consensus       302 v~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y~~~~  361 (379)
                      +..++...+++..+++.+.+++++.++++++||+++++.+++|.++++.|...|.+.+++
T Consensus       242 i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k  301 (303)
T PF08449_consen  242 IFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKK  301 (303)
T ss_pred             HHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhcc
Confidence            666777889999999999999999999999999999999999999999999999986543

; GO: 0055085 transmembrane transport

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.88  E-value=4.9e-21  Score=181.86  Aligned_cols=219  Identities=21%  Similarity=0.314  Sum_probs=165.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCC
Q 017017          116 TLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSE  195 (379)
Q Consensus       116 ~~~~~~~~~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~  195 (379)
                      |..+.+.+.+++++.+|.+...+++++|++++++++|+++++|++|+++++|||++++||.|++++++|+++++.++..+
T Consensus        15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            44444555666666666555599999999999999999999999999999999999999999999999999987665332


Q ss_pred             C--C--Cc----cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-hhhHHHHHHHHHHHHHHHHHHHHhhccc
Q 017017          196 G--P--SK----VSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQS-FGVVLDMQIYTSFVATCICIVGLFASGE  266 (379)
Q Consensus       196 ~--~--~~----~~~~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~-~~~vle~q~~~~lva~~~~~vgl~~~g~  266 (379)
                      +  +  .+    .+..+...|+++++.+++++|+    ..++.||++|+.. ..+..++|++.  .+.++.++..... |
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~----agVy~E~~lK~~~~s~~~~N~qL~~--~gi~~~~~~~~~~-~  167 (244)
T PF04142_consen   95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGF----AGVYFEKLLKRSNVSLWIQNMQLYL--FGILFNLLALLLS-D  167 (244)
T ss_pred             cccccccccccccccchhHhHHHHHHHHHHHHHH----HHHHHHHHhcccchhHHHHHHHHHH--HHHHHHHHHHhcc-c
Confidence            1  1  11    1234678999999999999999    6666777777653 34677777654  5556666655444 4


Q ss_pred             cchhccccccccccchHHHHHHHHHHHHHHH-HHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHH
Q 017017          267 WRTLSGEMQGFGKGKVSYVMVIVWTAVSWQV-CSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAM  345 (379)
Q Consensus       267 ~~~l~~e~~~f~~g~~~y~l~lv~~av~~q~-~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~  345 (379)
                      +.++.+  +++++|.    ...+|..+..|. .++.+..+.+++|++.+++...+.+.++.++++++||.+++..-.+|.
T Consensus       168 ~~~~~~--~g~f~G~----~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~  241 (244)
T PF04142_consen  168 GSAISE--SGFFHGY----SWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGA  241 (244)
T ss_pred             cccccc--CCchhhc----chHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhe
Confidence            444433  3455553    334455555554 557777788999999999999999999999999999999999888776


Q ss_pred             HH
Q 017017          346 LM  347 (379)
Q Consensus       346 ~l  347 (379)
                      .+
T Consensus       242 ~~  243 (244)
T PF04142_consen  242 AL  243 (244)
T ss_pred             ec
Confidence            54

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.86  E-value=1.5e-19  Score=175.70  Aligned_cols=266  Identities=17%  Similarity=0.094  Sum_probs=169.0

Q ss_pred             cCCCchhhHHHHHhchhhHhhhhhhccccccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHh
Q 017017           73 QGGNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICA  152 (379)
Q Consensus        73 ~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~Gl~~~~~nlly~~gL~ylp~st~sli~s  152 (379)
                      ++-+-++..++.|.+.--+...+.+....++  ++    +..+|.+...++.|+..+.++.+..+|++|+++++++++.+
T Consensus        26 ~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~   99 (302)
T TIGR00817        26 NVFPYPYFKTLISLAVGSLYCLLSWSSGLPK--RL----KISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKA   99 (302)
T ss_pred             hhCChhHHHHHHHHHHHHHHHHHHHHhCCCC--CC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence            4456688888888664333222221111111  11    12234444556678888888889999999999999999999


Q ss_pred             hhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017017          153 SQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQK  232 (379)
Q Consensus       153 sql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~~~~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk  232 (379)
                      ++|+|+++++++++|||++++++.++++.++|+++... ++.        .....|++++++|++++++|..+.++..+ 
T Consensus       100 ~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~-~~~--------~~~~~G~~~~l~a~~~~a~~~v~~k~~~~-  169 (302)
T TIGR00817       100 MEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASD-TEL--------SFNWAGFLSAMISNITFVSRNIFSKKAMT-  169 (302)
T ss_pred             cchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcC-Ccc--------cccHHHHHHHHHHHHHHHHHHHHHHHhhc-
Confidence            99999999999999999999999999999999987532 111        12367999999999999998877644433 


Q ss_pred             hhcccchhhHHHHHHHHHHHHHHHHHHHHhhccccchhcccccccc--cc-chHHHHHHHHHHHHHHHHHhhhhhhhhee
Q 017017          233 VLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFG--KG-KVSYVMVIVWTAVSWQVCSVGVVGLIYVV  309 (379)
Q Consensus       233 ~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e~~~f~--~g-~~~y~l~lv~~av~~q~~~~gv~glv~~~  309 (379)
                         ++.++ ..++..|...++.++++...+..++.+..+.+.....  .. ...+...++.....+........-.+..+
T Consensus       170 ---~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  245 (302)
T TIGR00817       170 ---IKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRV  245 (302)
T ss_pred             ---cCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence               11111 2334445555555444433333222222222111110  01 01121112222111111111111234567


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHhc
Q 017017          310 SSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQ  358 (379)
Q Consensus       310 ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y~  358 (379)
                      ++...++.....+.++.+++++++||+++..+++|+++++.|...|.+.
T Consensus       246 sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~  294 (302)
T TIGR00817       246 SPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRV  294 (302)
T ss_pred             CchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHH
Confidence            8888888877666677889999999999999999999999999887754

specificities overlap.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.84  E-value=1.3e-17  Score=166.68  Aligned_cols=236  Identities=14%  Similarity=0.151  Sum_probs=151.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHH------hccccchHHHHHHHHHHHHHHHhh
Q 017017          116 TLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFI------NSQKFTALILNSVVILSLSAALIA  189 (379)
Q Consensus       116 ~~~~~~~~~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~li------l~ek~t~~~i~svvLl~~G~~ll~  189 (379)
                      |.+...++.|++-...+.++.+|++|+|++.++++.+++|+|++++++++      +|||.+++++.|+++.++|++++.
T Consensus        76 ~~~~~l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~  155 (358)
T PLN00411         76 SILSKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVI  155 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHH
Confidence            33333444555544455567799999999999999999999999999999      699999999999999999999876


Q ss_pred             ccCCCC---------------C-CCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHH
Q 017017          190 VNEGSE---------------G-PSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVA  253 (379)
Q Consensus       190 ~~~~s~---------------~-~~~~~~~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva  253 (379)
                      .+++..               + +......+..+|+++.++|+++||+|..+.+...+|+    +..  ..+..+.++++
T Consensus       156 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~----~~~--~~~t~~~~~~~  229 (358)
T PLN00411        156 FYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEY----PAA--FTVSFLYTVCV  229 (358)
T ss_pred             HccCcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----CcH--hHHHHHHHHHH
Confidence            532210               0 0011122346799999999999999988876555443    211  22333444444


Q ss_pred             HHHHH-HHHhhccc-cchhccccccccccc--hHHHHHHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHH
Q 017017          254 TCICI-VGLFASGE-WRTLSGEMQGFGKGK--VSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVS  329 (379)
Q Consensus       254 ~~~~~-vgl~~~g~-~~~l~~e~~~f~~g~--~~y~l~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ila  329 (379)
                      ..++. .++..+++ .+...   ..+ +..  ...|..+ .+.+.|.+...++    ...+...++....+.+.++.+++
T Consensus       230 ~~~~~~~~l~~~~~~~~~~~---~~~-~~~~~~i~y~~i-~t~lay~lw~~~v----~~~ga~~as~~~~L~PV~a~llg  300 (358)
T PLN00411        230 SIVTSMIGLVVEKNNPSVWI---IHF-DITLITIVTMAI-ITSVYYVIHSWTV----RHKGPLYLAIFKPLSILIAVVMG  300 (358)
T ss_pred             HHHHHHHHHHHccCCcccce---ecc-chHHHHHHHHHH-HHHHHHHHHHHHH----hccCchHHHHHHhHHHHHHHHHH
Confidence            44443 34444432 11110   011 100  1122222 2334444444443    23344445555555555778899


Q ss_pred             HHHhCCcchhHHHHHHHHHHHHHHHHHhccccccccc
Q 017017          330 VIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRS  366 (379)
Q Consensus       330 vl~fge~ls~~k~ig~~lvl~G~~~y~y~~~~~~~k~  366 (379)
                      ++++||++++.+++|+++++.|+.....++.+|+|.+
T Consensus       301 ~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~~~~~  337 (358)
T PLN00411        301 AIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEKDQ  337 (358)
T ss_pred             HHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Confidence            9999999999999999999999988776554444433

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.83  E-value=1.9e-17  Score=165.08  Aligned_cols=286  Identities=16%  Similarity=0.135  Sum_probs=177.7

Q ss_pred             HHHHHhHhHHHHHHHHHhcCCCchhhHHHHHhchhhHhhhhhhccccccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 017017           55 FLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNML  134 (379)
Q Consensus        55 ~l~~g~~~~~ll~r~y~~~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~Gl~~~~~nll  134 (379)
                      .-...+...++..|.-.++ -+-+|..++.|..---+....++....++  .++  .+..++.+...++.|+.....+..
T Consensus        56 ~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~~~~--~~~--~~~~~~~~~~llp~gl~~~~~~~~  130 (350)
T PTZ00343         56 TWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATGFRK--IPR--IKSLKLFLKNFLPQGLCHLFVHFG  130 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhCCCC--CCC--CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3344445555666655544 33489999999764332222222221111  111  110111222223345544444444


Q ss_pred             HHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCccchhhhHHHHHHHHH
Q 017017          135 YSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWKYILGFISTVG  214 (379)
Q Consensus       135 y~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~~~~~~~~G~ll~L~  214 (379)
                      ...|+++++++.++++.++.|+|+++++++++|||++++++.++++.++|+++...++.         .....|++++++
T Consensus       131 ~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~---------~~~~~G~~~~l~  201 (350)
T PTZ00343        131 AVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL---------HFTWLAFWCAML  201 (350)
T ss_pred             HHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc---------hhHHHHHHHHHH
Confidence            44899999999999999999999999999999999999999999999999999753211         124779999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcc-cchhhHHHHHHHHHHHHHHHHHHH-Hhhccc-cchhc----cccccccccchHHHHH
Q 017017          215 ASAIYSLLLSLMQLSFQKVLKR-QSFGVVLDMQIYTSFVATCICIVG-LFASGE-WRTLS----GEMQGFGKGKVSYVMV  287 (379)
Q Consensus       215 Aa~~~al~l~l~~~~~kk~~~~-~~~~~vle~q~~~~lva~~~~~vg-l~~~g~-~~~l~----~e~~~f~~g~~~y~l~  287 (379)
                      |++++++|.++.|+..++...+ +... ..++..+..+++.+.++.. .+.++. +....    .++..+...... + .
T Consensus       202 s~~~~a~~~i~~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l-~-~  278 (350)
T PTZ00343        202 SNLGSSLRSIFAKKTMKNKSEIGENLT-ASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIII-F-K  278 (350)
T ss_pred             HHHHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHH-H-H
Confidence            9999999999987766543211 1111 2333333344555444432 223321 11000    011111111111 1 2


Q ss_pred             HHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHh
Q 017017          288 IVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIY  357 (379)
Q Consensus       288 lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y  357 (379)
                      ++.+.+.+.+...........++.+..++....+++++.++++++|||+++..+++|.++++.|...|.+
T Consensus       279 i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~  348 (350)
T PTZ00343        279 IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSL  348 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhh
Confidence            3344444444333222344567888888888888888899999999999999999999999999988865

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.82  E-value=5.1e-20  Score=173.38  Aligned_cols=290  Identities=15%  Similarity=0.211  Sum_probs=210.3

Q ss_pred             HHHHHHHHHhHhHHH--HHHHHHhc--CCCchhhHHHHHhchhhHhhhhhhccccccCCCCCCCCChhHHHHHHHHHHHH
Q 017017           51 VNIFFLIAGQAAAVI--LGRYYYDQ--GGNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGA  126 (379)
Q Consensus        51 ~~~~~l~~g~~~~~l--l~r~y~~~--~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~Gl  126 (379)
                      +..+..++|+||++.  ++.+..++  .||   +.|+.|......--++..   .+-...+ .+.|.. ..+...+.+-.
T Consensus         5 ~~ai~~vf~GCcsnvv~lE~L~~~~pgsgN---LITFaqFlFia~eGlif~---skf~~~k-~kiplk-~Y~i~V~mFF~   76 (330)
T KOG1583|consen    5 AAAISLVFGGCCSNVVFLELLVRNEPGSGN---LITFAQFLFIATEGLIFT---SKFFTVK-PKIPLK-DYAITVAMFFI   76 (330)
T ss_pred             HHHHHHHHHhhhchHHHHHHHHHhCCCCee---ehHHHHHHHHHHhceeee---ccccccC-CCCchh-hhheehheeee
Confidence            344578889999988  66666554  467   999999655555433332   1111111 234433 33444455556


Q ss_pred             HHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCC---------
Q 017017          127 ILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGP---------  197 (379)
Q Consensus       127 ~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~---------  197 (379)
                      ....||..+.+.   +|...+.++++-.++.||+.+++++|+|++.+|+.|+++.++|+++-.+.++.|..         
T Consensus        77 vnv~NN~al~f~---I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~  153 (330)
T KOG1583|consen   77 VNVTNNYALKFN---IPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSG  153 (330)
T ss_pred             eeeeccceeeec---ccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccC
Confidence            677788755444   44555999999999999999999999999999999999999999876544332211         


Q ss_pred             -CccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHH-H-Hhhccccchhcc-c
Q 017017          198 -SKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIV-G-LFASGEWRTLSG-E  273 (379)
Q Consensus       198 -~~~~~~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~v-g-l~~~g~~~~l~~-e  273 (379)
                       +..+.....+|+.+...|.+.+|...+..|..|||+.|+     .-|..+|.++.+.+.++. + .+.+ +|...-. |
T Consensus       154 ~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh-----~~EalFytH~LsLP~Flf~~~div~-~~~~~~~se  227 (330)
T KOG1583|consen  154 SAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKH-----WKEALFYTHFLSLPLFLFMGDDIVS-HWRLAFKSE  227 (330)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----hHHHHHHHHHhccchHHHhcchHHH-HHHHHhcCc
Confidence             111223446899999999999999999999999999764     578888888887776663 2 1111 1211110 0


Q ss_pred             ---cccccccchHHHHHHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHH
Q 017017          274 ---MQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIW  350 (379)
Q Consensus       274 ---~~~f~~g~~~y~l~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~  350 (379)
                         ...+.---+..+..+..+.+++.+|.-||.-+...++|++.+++.+++.-++.+++++.|.+++++..++|.++++.
T Consensus       228 ~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~  307 (330)
T KOG1583|consen  228 SYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFF  307 (330)
T ss_pred             ceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHH
Confidence               00110002455666889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHh
Q 017017          351 GFASYIY  357 (379)
Q Consensus       351 G~~~y~y  357 (379)
                      |...|.-
T Consensus       308 Gt~~fa~  314 (330)
T KOG1583|consen  308 GTLLFAN  314 (330)
T ss_pred             HHHHHHH
Confidence            9999944

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.76  E-value=9.9e-16  Score=144.77  Aligned_cols=207  Identities=12%  Similarity=0.125  Sum_probs=145.1

Q ss_pred             HHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCccchh
Q 017017          124 LGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKW  203 (379)
Q Consensus       124 ~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~~~~  203 (379)
                      .++....++.+|.+|++|+|+++.+++.+++|+++++++.+++|||++++++.++++.++|+.++..+++.        +
T Consensus        53 ~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~--------~  124 (260)
T TIGR00950        53 GALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL--------S  124 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcc--------c
Confidence            34455788888889999999999999999999999999999999999999999999999999987543211        1


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhhccccchhccccccccccchH
Q 017017          204 KYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGKVS  283 (379)
Q Consensus       204 ~~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e~~~f~~g~~~  283 (379)
                      .+..|+++.+.|+++++.+..+.++..++.    +... ..+..+...++.+++..-....++....  +.+.+   ...
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~----~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~---~~~  194 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVKKE----GPEL-LQFTGWVLLLGALLLLPFAWFLGPNPQA--LSLQW---GAL  194 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhhcC----CchH-HHHHHHHHHHHHHHHHHHHHhcCCCCCc--chHHH---HHH
Confidence            246799999999999999888764444332    2111 1122233445555444333333321111  11111   112


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHH
Q 017017          284 YVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGF  352 (379)
Q Consensus       284 y~l~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~  352 (379)
                      .++.++.+.+.+.+...++    .+.+....+......++++.+++++++||++++.+++|.++++.|.
T Consensus       195 ~~~~~~~~~~~~~~~~~a~----~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       195 LYLGLIGTALAYFLWNKGL----TLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHH----hcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            2334555555555554443    3456666777777888899999999999999999999999999875

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.72  E-value=1.6e-14  Score=140.20  Aligned_cols=261  Identities=12%  Similarity=0.095  Sum_probs=162.0

Q ss_pred             hHHHHHHHHHhcCCCchhhHHHHHhchhhHhhhhhhccccccCCCCCCCCChhHHHHHHHHHHHHHH-HHHHHHHHHhh-
Q 017017           62 AAVILGRYYYDQGGNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAIL-AGDNMLYSVGL-  139 (379)
Q Consensus        62 ~~~ll~r~y~~~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~Gl~~-~~~nlly~~gL-  139 (379)
                      .+.+..|.-.+  +-+.+..++.....--+++.+....+ ++  +.    + .+|........|++. +..+.++.++. 
T Consensus        22 ~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~-~~--~~----~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~   91 (292)
T PRK11272         22 STYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLR-GH--PL----P-TLRQWLNAALIGLLLLAVGNGMVTVAEH   91 (292)
T ss_pred             hHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHh-CC--CC----C-cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56777886555  33445555555544333333443321 11  11    1 123333334556554 45566666898 


Q ss_pred             ccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCccchhhhHHHHHHHHHHHHHH
Q 017017          140 LYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWKYILGFISTVGASAIY  219 (379)
Q Consensus       140 ~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~~~~~~~~G~ll~L~Aa~~~  219 (379)
                      +++|++..+++..++|+|+++++++ +|||++++++.|+++.++|+.++..+++.        +....|+++.++|+++|
T Consensus        92 ~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~--------~~~~~G~l~~l~a~~~~  162 (292)
T PRK11272         92 QNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL--------SGNPWGAILILIASASW  162 (292)
T ss_pred             ccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc--------ccchHHHHHHHHHHHHH
Confidence            9999999999999999999999986 69999999999999999999887443211        11357999999999999


Q ss_pred             HHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHH-HHHhhccccchhccccccccccchHHHHHHHHHHHHHHHH
Q 017017          220 SLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICI-VGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVC  298 (379)
Q Consensus       220 al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~-vgl~~~g~~~~l~~e~~~f~~g~~~y~l~lv~~av~~q~~  298 (379)
                      |+|....    ||..++++ ....-++   ..++...+. .....++++...+ +.+.+   ....++.++.+++.+...
T Consensus       163 a~~~~~~----~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~i~~l~i~~s~~~~~l~  230 (292)
T PRK11272        163 AFGSVWS----SRLPLPVG-MMAGAAE---MLAAGVVLLIASLLSGERLTALP-TLSGF---LALGYLAVFGSIIAISAY  230 (292)
T ss_pred             HHHHHHH----HhcCCCcc-hHHHHHH---HHHHHHHHHHHHHHcCCcccccC-CHHHH---HHHHHHHHHHHHHHHHHH
Confidence            9987774    44422222 1111122   223333322 2222222211111 11111   122334566666666655


Q ss_pred             HhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHh
Q 017017          299 SVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIY  357 (379)
Q Consensus       299 ~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y  357 (379)
                      ..++    .+.+.-..++.....++.+.+++++++||+++..+++|+++++.|......
T Consensus       231 ~~~~----~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        231 MYLL----RNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHH----hhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            5543    234455566666777778899999999999999999999999988877644

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.72  E-value=3.9e-15  Score=144.89  Aligned_cols=215  Identities=12%  Similarity=0.192  Sum_probs=143.9

Q ss_pred             HHHHHHHHhhcc-CChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCccchhhhHHH
Q 017017          130 GDNMLYSVGLLY-LSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWKYILG  208 (379)
Q Consensus       130 ~~nlly~~gL~y-lp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~~~~~~~~G  208 (379)
                      .+..++..+++| +|++..+++.+++|+++++++++++|||++++++.++++.++|+.++..++.. .     ......|
T Consensus        71 ~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~-~-----~~~~~~G  144 (299)
T PRK11453         71 GQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLN-G-----QHVAMLG  144 (299)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCC-C-----cchhHHH
Confidence            344455578888 69999999999999999999999999999999999999999999887533211 1     1113579


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHH-HHHhhccccchhcccccccc--ccchHHH
Q 017017          209 FISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICI-VGLFASGEWRTLSGEMQGFG--KGKVSYV  285 (379)
Q Consensus       209 ~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~-vgl~~~g~~~~l~~e~~~f~--~g~~~y~  285 (379)
                      +++++.|+++|++|..+.++..++    ......+.++.+.++++..++. .+...+++. ....+...+.  .-....|
T Consensus       145 ~~l~l~aal~~a~~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~  219 (299)
T PRK11453        145 FMLTLAAAFSWACGNIFNKKIMSH----STRPAVMSLVVWSALIPIIPFFVASLILDGSA-TMIHSLVTIDMTTILSLMY  219 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc----cCccchhHHHHHHHHHHHHHHHHHHHHhcCch-hhhhhhccCCHHHHHHHHH
Confidence            999999999999998887554332    2222234455566665554444 233333321 1110000110  0011234


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHhcc
Q 017017          286 MVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQN  359 (379)
Q Consensus       286 l~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y~~  359 (379)
                      +.++.+++.+.+...++..+    +.-.++.+....+.++.+++++++||+++..+++|+++++.|...-.+++
T Consensus       220 l~i~~t~~~~~l~~~~l~~~----~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        220 LAFVATIVGYGIWGTLLGRY----ETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            45677777777665554322    23344555556656778899999999999999999999999888766644

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.71  E-value=1.2e-15  Score=149.29  Aligned_cols=310  Identities=15%  Similarity=0.229  Sum_probs=216.7

Q ss_pred             hccchhHHHHHHHHHHHHHHHhHhHHHHHHHHHhc-CCCchhhHHHHHhchhhHhhhhhhcc----c---cc--cC----
Q 017017           39 KLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQ-GGNSKWLATLVQTAAFPILYIPLFLL----P---AS--QE----  104 (379)
Q Consensus        39 ~~~~~~~w~~~~~~~~~l~~g~~~~~ll~r~y~~~-~g~~~w~~t~vq~agfp~l~~~~~~~----~---~~--~~----  104 (379)
                      ..++|| |.+-++..+++.+==..+.=+.++-|++ .-++++..|.+-++-|.+.++|..+.    +   .|  +.    
T Consensus         6 ~~~~~r-~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~   84 (416)
T KOG2765|consen    6 FTKRWR-WTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAI   84 (416)
T ss_pred             hhhhhH-HHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhh
Confidence            345556 5444444444443334555566666665 45799999999999999998875521    0   01  00    


Q ss_pred             -C-----------------------------------C-----C-------CCCCC-hh------------HHHHHHHHH
Q 017017          105 -V-----------------------------------S-----S-------SSRYP-SF------------VTLALVYLV  123 (379)
Q Consensus       105 -~-----------------------------------~-----~-------~~~~p-~~------------~~~~~~~~~  123 (379)
                       .                                   +     +       +++.+ ..            ++.+-++..
T Consensus        85 ~~e~d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~  164 (416)
T KOG2765|consen   85 MEEADAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLF  164 (416)
T ss_pred             hhhhhhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHH
Confidence             0                                   0     0       00011 12            266777888


Q ss_pred             HHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCccchh
Q 017017          124 LGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKW  203 (379)
Q Consensus       124 ~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~~~~  203 (379)
                      +..+...-|+.|+.+|.|++++..+++.+++-+||..++.++..||+|..+++++.+.+.|++++..+++.+ .++....
T Consensus       165 fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~-~~~~~a~  243 (416)
T KOG2765|consen  165 FCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ-NSDLPAS  243 (416)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc-cccCCcc
Confidence            999999999999999999999999999999999999999999999999999999999999999987665432 2233356


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHH---HHhh---cc-ccchhcccccc
Q 017017          204 KYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIV---GLFA---SG-EWRTLSGEMQG  276 (379)
Q Consensus       204 ~~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~v---gl~~---~g-~~~~l~~e~~~  276 (379)
                      +..+|+++++++|++||+|..+.    ||-..++.  .-+++|.+.++++..-+++   .+++   .+ |--++|...  
T Consensus       244 ~~llG~llaL~sA~~YavY~vll----k~~~~~eg--~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~--  315 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLL----KRKIGDEG--ERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSST--  315 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHH----Hhhccccc--ccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCc--
Confidence            68999999999999999999984    44333331  1245666666655433332   2211   11 111333321  


Q ss_pred             ccccchHHHHHHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHH
Q 017017          277 FGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYI  356 (379)
Q Consensus       277 f~~g~~~y~l~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~  356 (379)
                        +...-....++.+.++=.++..++    ..++++...+.+++-+|++.++-+++=|.++++..++|.+.++.|+..-.
T Consensus       316 --q~~~vv~~~ligtvvSDylW~~a~----~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn  389 (416)
T KOG2765|consen  316 --QFSLVVFNNLIGTVVSDYLWAKAV----LLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVN  389 (416)
T ss_pred             --eeEeeeHhhHHHHHHHHHHHHHHH----HhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhhee
Confidence              111112234777877766666664    56788889888999999999999999999999999999999999999988


Q ss_pred             hccccccc
Q 017017          357 YQNYLDDY  364 (379)
Q Consensus       357 y~~~~~~~  364 (379)
                      |....+.+
T Consensus       390 ~~~~~~~~  397 (416)
T KOG2765|consen  390 ISSENSKK  397 (416)
T ss_pred             cccccccc
Confidence            76544433

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.69  E-value=2.5e-14  Score=139.15  Aligned_cols=214  Identities=11%  Similarity=0.107  Sum_probs=138.7

Q ss_pred             HHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCccc
Q 017017          122 LVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVS  201 (379)
Q Consensus       122 ~~~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~~  201 (379)
                      +..++..+.++.+|.+|++++|+++.+++..+.|+++++++++++|||++++++.++++.++|++++..+++ +      
T Consensus        77 ~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~-~------  149 (296)
T PRK15430         77 AVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG-S------  149 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC-C------
Confidence            345666788899999999999999999999999999999999999999999999999999999998743211 1      


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhhccccchhccccccccccc
Q 017017          202 KWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGK  281 (379)
Q Consensus       202 ~~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e~~~f~~g~  281 (379)
                         .   .+..++|+++||+|..+.    ||..+++... ......+...++.+. .... ...+......  ..+. ..
T Consensus       150 ---~---~~~~l~aa~~~a~~~i~~----r~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~--~~~~-~~  213 (296)
T PRK15430        150 ---L---PIIALGLAFSFAFYGLVR----KKIAVEAQTG-MLIETMWLLPVAAIY-LFAI-ADSSTSHMGQ--NPMS-LN  213 (296)
T ss_pred             ---c---cHHHHHHHHHHHHHHHHH----HhcCCCCchh-HHHHHHHHHHHHHHH-HHHH-ccCCcccccC--CcHH-HH
Confidence               0   145777899999988774    3332222111 122222333222222 1111 1111100000  0010 00


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHhcccc
Q 017017          282 VSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYL  361 (379)
Q Consensus       282 ~~y~l~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y~~~~  361 (379)
                      ..++...+.+++.+.+...+.    .+.+.-..+......++++.+++++++||++++.+++|+++++.|......+.-.
T Consensus       214 ~~~~~~g~~t~i~~~~~~~a~----~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~  289 (296)
T PRK15430        214 LLLIAAGIVTTVPLLCFTAAA----TRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIY  289 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH----hcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            111112223444444333332    3445556666777777788999999999999999999999999999998776543


Q ss_pred             c
Q 017017          362 D  362 (379)
Q Consensus       362 ~  362 (379)
                      .
T Consensus       290 ~  290 (296)
T PRK15430        290 T  290 (296)
T ss_pred             H
Confidence            3

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.62  E-value=8.5e-13  Score=128.21  Aligned_cols=209  Identities=14%  Similarity=0.101  Sum_probs=138.3

Q ss_pred             HHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCccc
Q 017017          122 LVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVS  201 (379)
Q Consensus       122 ~~~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~~  201 (379)
                      ...|+..+..+.++.++++|+|++..+++..++|+++++++    +||..+.+  ++.+.++|+.++...+. +.     
T Consensus        75 ~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~~--~~~i~~~Gv~li~~~~~-~~-----  142 (293)
T PRK10532         75 LFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDFV--WVVLAVLGLWFLLPLGQ-DV-----  142 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHHH--HHHHHHHHHheeeecCC-Cc-----
Confidence            34566677788888899999999999999999999999887    36655544  46677899887642221 11     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhhccccchhccccccccccc
Q 017017          202 KWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGK  281 (379)
Q Consensus       202 ~~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e~~~f~~g~  281 (379)
                      +.....|+++.++|+++|+.|..+.++..+    +.+....    .+..+++..+........++  ....+...+   .
T Consensus       143 ~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~----~~~~~~~----~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~---~  209 (293)
T PRK10532        143 SHVDLTGAALALGAGACWAIYILSGQRAGA----EHGPATV----AIGSLIAALIFVPIGALQAG--EALWHWSIL---P  209 (293)
T ss_pred             ccCChHHHHHHHHHHHHHHHHHHHHHHHhc----cCCchHH----HHHHHHHHHHHHHHHHHccC--cccCCHHHH---H
Confidence            112467999999999999998888754433    2222211    12233444333322222211  111111111   0


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHhcc
Q 017017          282 VSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQN  359 (379)
Q Consensus       282 ~~y~l~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y~~  359 (379)
                      ...|+.++.+++.|.+...++    .+.+...++......++++.+++++++||+++..+++|+++++.|...+.+.+
T Consensus       210 ~~l~lgv~~t~~~~~l~~~~~----~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        210 LGLAVAILSTALPYSLEMIAL----TRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH----HhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            123566777777776655554    34455567777777777889999999999999999999999999998886543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.60  E-value=1.8e-13  Score=133.03  Aligned_cols=213  Identities=8%  Similarity=0.055  Sum_probs=132.5

Q ss_pred             HHHHHHHHHHHHHhhc----cCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCc-
Q 017017          125 GAILAGDNMLYSVGLL----YLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSK-  199 (379)
Q Consensus       125 Gl~~~~~nlly~~gL~----ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~-  199 (379)
                      ++.....+.++..++.    ++|++..+++.+++|+|+++++++++|||++++++.++++.++|++++..++.+.+..+ 
T Consensus        68 ~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~  147 (295)
T PRK11689         68 GLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAEL  147 (295)
T ss_pred             hHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhh
Confidence            3444555655545554    57888899999999999999999999999999999999999999998754322111000 


Q ss_pred             -cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhhccccchhcccccccc
Q 017017          200 -VSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFG  278 (379)
Q Consensus       200 -~~~~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e~~~f~  278 (379)
                       .+..+...|+++.++|+++|++|..+.++    ..++....   .+..   ..+.+.+.......+++ ..+.+   . 
T Consensus       148 ~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~----~~~~~~~~---~~~~---~~~~~~l~~~~~~~~~~-~~~~~---~-  212 (295)
T PRK11689        148 INNIASNPLSYGLAFIGAFIWAAYCNVTRK----YARGKNGI---TLFF---ILTALALWIKYFLSPQP-AMVFS---L-  212 (295)
T ss_pred             hhccccChHHHHHHHHHHHHHHHHHHHHhh----ccCCCCch---hHHH---HHHHHHHHHHHHHhcCc-cccCC---H-
Confidence             01122457999999999999998888644    32222211   1111   11112222222223221 11111   1 


Q ss_pred             ccchHHHH-HHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHh
Q 017017          279 KGKVSYVM-VIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIY  357 (379)
Q Consensus       279 ~g~~~y~l-~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y  357 (379)
                      + .+.+.+ ..+.+++.+.+...++    .+.+....+......++++.+++++++||+++..+++|+++++.|......
T Consensus       213 ~-~~~~l~~~~~~t~~~~~l~~~al----~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        213 P-AIIKLLLAAAAMGFGYAAWNVGI----LHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHHHHH----HccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            0 111111 1122333333333332    234555566666666678899999999999999999999999999877644

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.60  E-value=5.3e-13  Score=128.72  Aligned_cols=216  Identities=6%  Similarity=0.001  Sum_probs=134.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCc
Q 017017          120 VYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSK  199 (379)
Q Consensus       120 ~~~~~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~  199 (379)
                      ..+..|+..+..+.++..|+++.|++..+.+..++|+++++++++++|||++++++.|+++.+.|+.++..++..    +
T Consensus        65 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~----~  140 (281)
T TIGR03340        65 LLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA----Q  140 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc----c
Confidence            334556667788888889999999999999999999999999999999999999999999999999987543211    1


Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhhccccchhccccccccc
Q 017017          200 VSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGK  279 (379)
Q Consensus       200 ~~~~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e~~~f~~  279 (379)
                          ....|+.+.+.++++|++|..+.++..++..   ..........+.......++..-....++. .....  .. .
T Consensus       141 ----~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~-~  209 (281)
T TIGR03340       141 ----HRRKAYAWALAAALGTAIYSLSDKAAALGVP---AFYSALGYLGIGFLAMGWPFLLLYLKRHGR-SMFPY--AR-Q  209 (281)
T ss_pred             ----cchhHHHHHHHHHHHHHHhhhhccccccchh---cccccHHHHHHHHHHHHHHHHHHHHHHhcc-chhhh--HH-H
Confidence                1235788899999999998887533221111   101111111111111111211111111111 11000  00 0


Q ss_pred             cchHHHHHHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHH
Q 017017          280 GKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFAS  354 (379)
Q Consensus       280 g~~~y~l~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~  354 (379)
                      .....++..+.+.+.+.+...++......    ..+......++++.+++++++||+++..+++|+++++.|...
T Consensus       210 ~~~~~~~~~~~s~l~~~l~~~al~~~~a~----~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       210 ILPSATLGGLMIGGAYALVLWAMTRLPVA----TVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCce----EEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            00112334555556665544443322221    122222344557788999999999999999999999998764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.54  E-value=8.4e-13  Score=126.53  Aligned_cols=228  Identities=18%  Similarity=0.213  Sum_probs=161.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccC
Q 017017          113 SFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNE  192 (379)
Q Consensus       113 ~~~~~~~~~~~~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~  192 (379)
                      +.+|+.    +.|+..+.|-.+-++++.|.|.|.|+++.++.++|..+|+.++--||+++.-...+.+..+|+.+....+
T Consensus        83 ~Lr~~a----Ptalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks  158 (349)
T KOG1443|consen   83 YLRRLA----PTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS  158 (349)
T ss_pred             HHHHhh----hhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence            354554    4477777777777789999999999999999999999999999999999998888888888877765543


Q ss_pred             CCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cccchhhHHHHHHHHHHHHHHHHHHHHhhccccchh
Q 017017          193 GSEGPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVL--KRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTL  270 (379)
Q Consensus       193 ~s~~~~~~~~~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~--~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l  270 (379)
                      .         .-...|+.++++|+++.|+.+.+.|...+|-.  ++.+..++..+|-++++   .....++.++|....+
T Consensus       159 T---------qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~---~Ll~~~l~fEG~~~~~  226 (349)
T KOG1443|consen  159 T---------QFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSI---GLLPLSLLFEGLHLIT  226 (349)
T ss_pred             c---------ceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHH---HHHHHHHHHcccccch
Confidence            2         23578999999999999999999999998852  45666777778877654   4444566677753322


Q ss_pred             ccc-cccccccchHHHHHHHHH--HHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHH
Q 017017          271 SGE-MQGFGKGKVSYVMVIVWT--AVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLM  347 (379)
Q Consensus       271 ~~e-~~~f~~g~~~y~l~lv~~--av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~l  347 (379)
                      ..+ .+.+..+....++..+..  ..+... ...-.-+...+++++.+++...+-..+.++|++..+|.++..++.|+.+
T Consensus       227 ~s~~f~~~d~~~~~rv~g~i~l~g~laF~l-~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i  305 (349)
T KOG1443|consen  227 SSSIFRFQDTGLILRVIGLISLGGLLAFLL-EFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAI  305 (349)
T ss_pred             hhhHHHhcCccHHHHHHHHHHHHHHHHHHH-HHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHH
Confidence            221 111212222111111111  011110 0111123334778888888777777888999999999999999999999


Q ss_pred             HHHHHHHHHh
Q 017017          348 AIWGFASYIY  357 (379)
Q Consensus       348 vl~G~~~y~y  357 (379)
                      ++.|...|-+
T Consensus       306 ~~agi~~~~~  315 (349)
T KOG1443|consen  306 CLAGILLHRN  315 (349)
T ss_pred             HHHHHHHhcc
Confidence            9999999833

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.50  E-value=9.3e-11  Score=111.10  Aligned_cols=214  Identities=14%  Similarity=0.220  Sum_probs=132.4

Q ss_pred             HHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHH-HHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCcc
Q 017017          122 LVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSY-FINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKV  200 (379)
Q Consensus       122 ~~~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~-lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~  200 (379)
                      +..++..+..+.+|..++++++++..+++.++.|+++++++. +++|||++++++.++++.++|+.++..++..+.    
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~----  149 (292)
T COG0697          74 LLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGG----  149 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcch----
Confidence            344566678888888999999999999999999999999996 777999999999999999999999865433211    


Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhhccccchhcccccccccc
Q 017017          201 SKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKG  280 (379)
Q Consensus       201 ~~~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e~~~f~~g  280 (379)
                       .. +..|+++.+.+++.++++....    |+.. +.......-.  +... ............ +.. .+.+...+   
T Consensus       150 -~~-~~~g~~~~l~a~~~~a~~~~~~----~~~~-~~~~~~~~~~--~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~---  214 (292)
T COG0697         150 -IL-SLLGLLLALAAALLWALYTALV----KRLS-RLGPVTLALL--LQLL-LALLLLLLFFLS-GFG-APILSRAW---  214 (292)
T ss_pred             -hH-HHHHHHHHHHHHHHHHHHHHHH----HHhc-CCChHHHHHH--HHHH-HHHHHHHHHHhc-ccc-ccCCHHHH---
Confidence             11 5789999999999999977775    4332 1111111110  1111 111111111111 111 11111011   


Q ss_pred             chHHHHHHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHhc
Q 017017          281 KVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQ  358 (379)
Q Consensus       281 ~~~y~l~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y~  358 (379)
                      ....+..++.+.+.+.....++    ...+....+......++.+.+++++++||+++..+++|.++++.|.....+.
T Consensus       215 ~~~~~~g~~~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         215 LLLLYLGVFSTGLAYLLWYYAL----RLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH----HhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            1111122333333333333332    1112222333333344455667999999999999999999999998888765

>TIGR00688 rarD rarD protein

Probab=99.40  E-value=1.3e-10  Score=110.33  Aligned_cols=97  Identities=11%  Similarity=0.023  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCC
Q 017017          118 ALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGP  197 (379)
Q Consensus       118 ~~~~~~~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~  197 (379)
                      .......|+..+.++.+|.+|++|+|+++++++.++.|+|+++++++++|||++++++.++++.++|++++..+ +++  
T Consensus        70 ~~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~-~~~--  146 (256)
T TIGR00688        70 ILSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVL-KGS--  146 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-cCC--
Confidence            33345667888999999999999999999999999999999999999999999999999999999999887432 111  


Q ss_pred             CccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 017017          198 SKVSKWKYILGFISTVGASAIYSLLLSLMQ  227 (379)
Q Consensus       198 ~~~~~~~~~~G~ll~L~Aa~~~al~l~l~~  227 (379)
                            ..    ++.++++++|++|....+
T Consensus       147 ------~~----~~~l~aa~~~a~~~i~~~  166 (256)
T TIGR00688       147 ------LP----WEALVLAFSFTAYGLIRK  166 (256)
T ss_pred             ------ch----HHHHHHHHHHHHHHHHHh
Confidence                  01    357889999999888753

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.40  E-value=7.6e-11  Score=112.86  Aligned_cols=219  Identities=11%  Similarity=0.098  Sum_probs=145.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCC
Q 017017          116 TLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSE  195 (379)
Q Consensus       116 ~~~~~~~~~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~  195 (379)
                      |.+....+.+++++.|-.+|.|+.++=.+-..|+=+-.+|+++.+++.+++|||+++.|+++++++.+|+....++.++-
T Consensus        70 ~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~l  149 (293)
T COG2962          70 KTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSL  149 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            66667788899999999999999999888888999999999999999999999999999999999999999887765432


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-hhhHHHHHHHHHHHHHHHHHHHHhhccccch-hc-c
Q 017017          196 GPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQS-FGVVLDMQIYTSFVATCICIVGLFASGEWRT-LS-G  272 (379)
Q Consensus       196 ~~~~~~~~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~-~~~vle~q~~~~lva~~~~~vgl~~~g~~~~-l~-~  272 (379)
                               .    +.+++=|+.|++|..+     ||..+-+. ....+|+....     +++++-++-.+|..+ .. .
T Consensus       150 ---------p----wval~la~sf~~Ygl~-----RK~~~v~a~~g~~lE~l~l~-----p~al~yl~~l~~~~~~~~~~  206 (293)
T COG2962         150 ---------P----WVALALALSFGLYGLL-----RKKLKVDALTGLTLETLLLL-----PVALIYLLFLADSGQFLQQN  206 (293)
T ss_pred             ---------c----HHHHHHHHHHHHHHHH-----HHhcCCchHHhHHHHHHHHh-----HHHHHHHHHHhcCchhhhcC
Confidence                     1    3445567789999888     66655443 23566766444     223322222223221 11 0


Q ss_pred             ccccccccchHHHHHHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHH
Q 017017          273 EMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGF  352 (379)
Q Consensus       273 e~~~f~~g~~~y~l~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~  352 (379)
                      +...+    ....+.=..|++...++..+-..    .+--+-|+..-+.+.+.-++|+++|||+++..+.++-+.+-.|.
T Consensus       207 ~~~~~----~LLv~aG~vTavpL~lf~~aa~~----lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL  278 (293)
T COG2962         207 ANSLW----LLLVLAGLVTAVPLLLFAAAAKR----LPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLAL  278 (293)
T ss_pred             CchHH----HHHHHhhHHHHHHHHHHHHHHhc----CCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence            00000    01111112222332232222111    11112344444555577889999999999999999999999999


Q ss_pred             HHHHhcccccccc
Q 017017          353 ASYIYQNYLDDYR  365 (379)
Q Consensus       353 ~~y~y~~~~~~~k  365 (379)
                      +.|......+.+|
T Consensus       279 ~l~~~d~l~~~r~  291 (293)
T COG2962         279 ALFSIDGLYTARK  291 (293)
T ss_pred             HHHHHHHHHHHhh
Confidence            9998876554444

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.35  E-value=4.5e-11  Score=113.57  Aligned_cols=223  Identities=15%  Similarity=0.196  Sum_probs=144.3

Q ss_pred             HHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCC-CCccchhhhH
Q 017017          128 LAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEG-PSKVSKWKYI  206 (379)
Q Consensus       128 ~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~-~~~~~~~~~~  206 (379)
                      ..+..++| .||.++++|.++.++-.-++|+.+|+.-+++++++.+||.|+....+|.++++..|-... .+..+.++..
T Consensus        97 i~gsslm~-vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~ii  175 (372)
T KOG3912|consen   97 IAGSSLMY-VGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSII  175 (372)
T ss_pred             HhhhHHHH-HHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccch
Confidence            36666888 999999999999999999999999999999999999999999999999999876542111 1122234457


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHH-H----HHhhccc-cchhccc-cccc--
Q 017017          207 LGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICI-V----GLFASGE-WRTLSGE-MQGF--  277 (379)
Q Consensus       207 ~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~-v----gl~~~g~-~~~l~~e-~~~f--  277 (379)
                      .|+++.+.|-+..|....+-|+..+|.    . ...++..-|-++++...+. .    ..+-.|| +..=|+. .++|  
T Consensus       176 tGdllIiiaqiivaiQ~v~Eek~l~~~----n-V~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~  250 (372)
T KOG3912|consen  176 TGDLLIIIAQIIVAIQMVCEEKQLKKS----N-VAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGD  250 (372)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhhhhhc----c-CCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHH
Confidence            799999999999999777655444443    1 1223333333443322111 1    1222332 1111110 0111  


Q ss_pred             ----cccchHHHHHHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHH
Q 017017          278 ----GKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFA  353 (379)
Q Consensus       278 ----~~g~~~y~l~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~  353 (379)
                          ..+.+..++++..+.++-..+-..-..+.++.|+.+-.+.-.++.-+.=+++...+.|.|...++.|.++.+.|..
T Consensus       251 ~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~  330 (372)
T KOG3912|consen  251 AFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGII  330 (372)
T ss_pred             HHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                1344555666666665544332222223344444444444445545556688888999999999999999999999


Q ss_pred             HHH
Q 017017          354 SYI  356 (379)
Q Consensus       354 ~y~  356 (379)
                      .|.
T Consensus       331 lY~  333 (372)
T KOG3912|consen  331 LYN  333 (372)
T ss_pred             HHH
Confidence            983

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.35  E-value=4.1e-12  Score=124.52  Aligned_cols=294  Identities=17%  Similarity=0.198  Sum_probs=178.8

Q ss_pred             HHHHHHHHHHHHHHhHhHHHHHHHHHhc-CCCchhhHHHHHhchhhHhhhhhhccccccCCCCCCCCChhHHHHHHHHHH
Q 017017           46 WVLVVVNIFFLIAGQAAAVILGRYYYDQ-GGNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVL  124 (379)
Q Consensus        46 w~~~~~~~~~l~~g~~~~~ll~r~y~~~-~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  124 (379)
                      +....++..+-.+.+.+..+..++-.+. +.+=+|..|.++.+-=-+...-........+ ++.+.+...++++.+    
T Consensus        15 ~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~-~~~~~~~~~~~llpl----   89 (316)
T KOG1441|consen   15 ILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPP-SKISSKLPLRTLLPL----   89 (316)
T ss_pred             hHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCC-CccccccchHHHHHH----
Confidence            4444444444444433333344443333 7788888888843322221111111111111 111112234455555    


Q ss_pred             HHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCccchhh
Q 017017          125 GAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWK  204 (379)
Q Consensus       125 Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~~~~~  204 (379)
                      |+.......+=..+++|.|+|.++.+.++.|+||.++++++.+|++++..+.+++....|+++-...+.         +-
T Consensus        90 ~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~---------~f  160 (316)
T KOG1441|consen   90 GLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL---------SF  160 (316)
T ss_pred             HHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc---------cc
Confidence            666666666666799999999999999999999999999999999999999999999999888654322         23


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHH--hhccccchhccccccccccch
Q 017017          205 YILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGL--FASGEWRTLSGEMQGFGKGKV  282 (379)
Q Consensus       205 ~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl--~~~g~~~~l~~e~~~f~~g~~  282 (379)
                      +..|++.++.+-+.+++..++.+...++  |++. ...++..-+.+-++...+++-.  ..+++- ....+.+.++-   
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~--~~~~-~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~-~~~~~~~~~~~---  233 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTS--KGES-LNSMNLLYYTAPISLIFLLIPFLDYVEGNK-FVGFLTAPWFV---  233 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhc--cccc-cCchHHHHHhhhHHHHHHhcchHhhhcccc-eeeeeccccch---
Confidence            6899999999999999977776555532  1222 2245555555555544444221  122221 10001112211   


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHhcccc
Q 017017          283 SYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYL  361 (379)
Q Consensus       283 ~y~l~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y~~~~  361 (379)
                      .++..+... +...+.-+...-++..+|.++-++....+-.+..+.++++|+|+.|+.++.|+++++.|...|.+.+.+
T Consensus       234 ~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~  311 (316)
T KOG1441|consen  234 TFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLK  311 (316)
T ss_pred             hhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhh
Confidence            112112222 222222233333445677777777776666777889999999999999999999999999998775533

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.33  E-value=1.1e-09  Score=106.70  Aligned_cols=224  Identities=14%  Similarity=0.158  Sum_probs=146.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHh-hhHHHHHHHHHHHhccccchHH----HHHHHHHHHHHHHhh
Q 017017          115 VTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICA-SQLAFNAVFSYFINSQKFTALI----LNSVVILSLSAALIA  189 (379)
Q Consensus       115 ~~~~~~~~~~Gl~~~~~nlly~~gL~ylp~st~sli~s-sql~Ftalfs~lil~ek~t~~~----i~svvLl~~G~~ll~  189 (379)
                      ++.+..++..|+..+..|+.|..+.+++.+++...+.+ ++++++++++.+++|||.++++    +.|+++..+|+.++.
T Consensus        56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~  135 (290)
T TIGR00776        56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS  135 (290)
T ss_pred             cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence            46677788999999999999999999999999999988 9999999999999999999999    999999999998876


Q ss_pred             ccCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhhccccch
Q 017017          190 VNEGSEGPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRT  269 (379)
Q Consensus       190 ~~~~s~~~~~~~~~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~  269 (379)
                      ..++++.. +.+..++..|+++.+.|+++|++|....+..     +-+++..+. .|.+.-+++..+..... .  +.+.
T Consensus       136 ~~~~~~~~-~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~-----~~~~~~~~~-~~~~g~~~~~~~~~~~~-~--~~~~  205 (290)
T TIGR00776       136 RSKDKSAG-IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF-----GVDGLSVLL-PQAIGMVIGGIIFNLGH-I--LAKP  205 (290)
T ss_pred             eccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHHc-----CCCcceehh-HHHHHHHHHHHHHHHHH-h--cccc
Confidence            54322111 0101234569999999999999999997632     112222111 23332222332222211 0  1011


Q ss_pred             hccccccccccchHHHHHHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHH----HHH
Q 017017          270 LSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKV----IAM  345 (379)
Q Consensus       270 l~~e~~~f~~g~~~y~l~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~----ig~  345 (379)
                      ...+ ..+    ......++| .+.+.....+...   +.....+.+.+...+.++.+.+++++||+.+..+.    +|.
T Consensus       206 ~~~~-~~~----~~~~~Gi~~-~ia~~~y~~~~~~---~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~  276 (290)
T TIGR00776       206 LKKY-AIL----LNILPGLMW-GIGNFFYLFSAQP---KVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGI  276 (290)
T ss_pred             hHHH-HHH----HHHHHHHHH-HHHHHHHHHHccc---ccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHH
Confidence            1110 000    000011222 2333333344321   33444566666777567788999999999999998    999


Q ss_pred             HHHHHHHHHHHh
Q 017017          346 LMAIWGFASYIY  357 (379)
Q Consensus       346 ~lvl~G~~~y~y  357 (379)
                      ++++.|...-.+
T Consensus       277 ~lIi~~~~l~~~  288 (290)
T TIGR00776       277 ILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHhc
Confidence            999988876543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.29  E-value=3.7e-10  Score=106.94  Aligned_cols=292  Identities=15%  Similarity=0.175  Sum_probs=200.5

Q ss_pred             hhHHHHHHHHHHHHHHHhHhHHHHHHHHHhcCCCc--hhhHHHHHhchhhHhhhhhhccccccCCCCCCCCChhHHHHHH
Q 017017           43 WQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNS--KWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALV  120 (379)
Q Consensus        43 ~~~w~~~~~~~~~l~~g~~~~~ll~r~y~~~~g~~--~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~  120 (379)
                      ..+|.--.+|+.-..++--.--.+..+-|+..|=+  -|-.|++|..--..    +.+...+--+..+...|....    
T Consensus        38 kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg----~glie~~~~~~k~r~iP~rtY----  109 (367)
T KOG1582|consen   38 KPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSG----FGLIELQLIQTKRRVIPWRTY----  109 (367)
T ss_pred             CchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHh----hhheEEEeecccceecchhHh----
Confidence            34477777777777777666667888888876644  79999999432211    112222110111223453222    


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCcc
Q 017017          121 YLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKV  200 (379)
Q Consensus       121 ~~~~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~  200 (379)
                       +.+..+..+...+-.-++.|+.--+-.++.+++++=+++.+.++-++|+.+.-..+..++.+|.++-.+.|+..+|   
T Consensus       110 -~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sP---  185 (367)
T KOG1582|consen  110 -VILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSP---  185 (367)
T ss_pred             -hhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCC---
Confidence             2223333333444446888888888999999999999999999999999999999999999999987776654333   


Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhhcccc-chhccccccccc
Q 017017          201 SKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEW-RTLSGEMQGFGK  279 (379)
Q Consensus       201 ~~~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~-~~l~~e~~~f~~  279 (379)
                        .-..+|..+.-+|-..=|+..=+.|..+++.    .-+ .+||.++...++.++..+.+..+||. +.++.    ..+
T Consensus       186 --NF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~----~~s-s~EmvfySy~iG~vflf~~mvlTge~f~a~~f----cae  254 (367)
T KOG1582|consen  186 --NFNLIGVMMISGALLADAVIGNVQEKAMKMN----PAS-SSEMVFYSYGIGFVFLFAPMVLTGELFSAWTF----CAE  254 (367)
T ss_pred             --CcceeeHHHHHHHHHHHHHhhHHHHHHHhhC----CCC-cceEEEeeecccHHHHHHHHHhcccchhhhHH----HHh
Confidence              3358899999999999999777766666554    212 37888888888888888888888862 21211    001


Q ss_pred             cc--hHHHHHHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHh
Q 017017          280 GK--VSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIY  357 (379)
Q Consensus       280 g~--~~y~l~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y  357 (379)
                      -+  ...|. ++-. .+-.+....|..++..-..+.+..+.+.+..++.+++.++|..++|..-.-++++++.|+....|
T Consensus       255 hp~~tyGy~-~~~s-~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~y  332 (367)
T KOG1582|consen  255 HPVRTYGYA-FLFS-LAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMY  332 (367)
T ss_pred             CcHhHHHHH-HHHH-HHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcc
Confidence            11  22222 1111 11112223344566666778888899999999999999999999999999999999999999888


Q ss_pred             cc
Q 017017          358 QN  359 (379)
Q Consensus       358 ~~  359 (379)
                      .+
T Consensus       333 sk  334 (367)
T KOG1582|consen  333 SK  334 (367)
T ss_pred             cC
Confidence            65

>TIGR00803 nst UDP-galactose transporter

Probab=99.29  E-value=6.4e-11  Score=110.39  Aligned_cols=212  Identities=15%  Similarity=0.172  Sum_probs=136.9

Q ss_pred             HHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCccchhhhHH
Q 017017          128 LAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWKYIL  207 (379)
Q Consensus       128 ~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~~~~~~~~  207 (379)
                      .-.|++.+ .++.+.++....+. +.|.+.++++...+++++++..||.++.++..|+.....++..++  ....++...
T Consensus        10 ~~s~~l~~-v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~--~~~~g~~~~   85 (222)
T TIGR00803        10 FKQNNLVL-IALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAK--TLMFGNPVV   85 (222)
T ss_pred             HHhcchHH-HHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcc--ccccccHHH
Confidence            33444555 88888888888888 899999999999999999999999888888888777654432211  112245678


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhccc-chhhHHHHHHHHHHHHHHHHHHHHhhccccchhccccccccccchHHHH
Q 017017          208 GFISTVGASAIYSLLLSLMQLSFQKVLKRQ-SFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGKVSYVM  286 (379)
Q Consensus       208 G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~-~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e~~~f~~g~~~y~l  286 (379)
                      |..+.+.++...++    ...+.|+..|+. ...+...++.  .++..+....+.... +....+.  .++.+|......
T Consensus        86 g~~~~l~a~~~~~~----~~~y~e~~~k~~~~~~~~~~~~l--~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~  156 (222)
T TIGR00803        86 GLSAVLSALLSSGF----AGVYFEKILKDGDTMFWSRNLQL--PLFGLFSTFSVLLWS-DGTLISN--FGFFIGYPTAVW  156 (222)
T ss_pred             HHHHHHHHHHHHhh----hHHHHHHcccCCCCchHHHHHHH--HHHHHHHHHHHHhhc-ccchhhc--cCcccCCchHHH
Confidence            98889889988888    444455543332 1112222222  222222223333332 2222222  233344333222


Q ss_pred             HHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHH
Q 017017          287 VIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASY  355 (379)
Q Consensus       287 ~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y  355 (379)
                      .++.+..   +.+.-+..+.++.++++++++.+.++.++.++++++|||+++..+++|+.+++.|...|
T Consensus       157 ~~~~~~a---~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       157 IVGLLNV---GGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHH---hcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            2222211   22244667788999999999999999999999999999999999999999999776554

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.29  E-value=7.3e-11  Score=102.93  Aligned_cols=149  Identities=19%  Similarity=0.223  Sum_probs=118.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhhccccchhccccccccc----cchH
Q 017017          208 GFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGK----GKVS  283 (379)
Q Consensus       208 G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e~~~f~~----g~~~  283 (379)
                      |+++++.|+++.|++.++.|+.+++..++......++++.+.+..+.+.+.+..+..++++..+... ....    +...
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~   79 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFS-EIFGEELSSDPN   79 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHH-HhhhhhhcchHH
Confidence            7899999999999999999888887522223345788999999999988887766655543222211 1111    1334


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHh
Q 017017          284 YVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIY  357 (379)
Q Consensus       284 y~l~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y  357 (379)
                      .+..++.+++.+.+..+....++..+|+++.+++..++.+++.++++++|||++|..+++|+++++.|...|.|
T Consensus        80 ~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   80 FIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            55567777888888778888899999999999999999999999999999999999999999999999999976

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.22  E-value=1.7e-10  Score=107.23  Aligned_cols=216  Identities=15%  Similarity=0.180  Sum_probs=149.8

Q ss_pred             HHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCccchhh
Q 017017          125 GAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWK  204 (379)
Q Consensus       125 Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~~~~~  204 (379)
                      .+-+.+.-.--..+++|.|-.|..+=.+++|+=+|+++.++.+++++|++...+.+..+|+++-...+..-  .+.++..
T Consensus        92 s~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv--~g~e~~t  169 (337)
T KOG1580|consen   92 SASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKV--GGAEDKT  169 (337)
T ss_pred             HHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccccc--CCCcccc
Confidence            33333333444468999999999999999999999999999999999999999999999999976654322  1333445


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhhccccchhccccccccccchHH
Q 017017          205 YILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGKVSY  284 (379)
Q Consensus       205 ~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e~~~f~~g~~~y  284 (379)
                      ...|.++.+.+-.+=|+-.+..++..+.+ .++.    -+|++++.+-+++.+.+|++..||..++-+-.+.  +-    
T Consensus       170 ~g~GElLL~lSL~mDGlTg~~Qdrira~y-q~~g----~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~R--hP----  238 (337)
T KOG1580|consen  170 FGFGELLLILSLAMDGLTGSIQDRIRASY-QRTG----TSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQR--HP----  238 (337)
T ss_pred             cchHHHHHHHHHHhcccchhHHHHHHHhh-ccCc----hhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHh--cc----
Confidence            68899999999999999666665555544 3333    2345555556677788899888873332110000  11    


Q ss_pred             HHHHHHHHHHHHHHH-hh---hhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHH
Q 017017          285 VMVIVWTAVSWQVCS-VG---VVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASY  355 (379)
Q Consensus       285 ~l~lv~~av~~q~~~-~g---v~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y  355 (379)
                        .++|......+++ +|   +.-.+.+-+.+..+++.+.+.-.+.+.+|++|++++++.+++|.++++.+...=
T Consensus       239 --~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D  311 (337)
T KOG1580|consen  239 --YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD  311 (337)
T ss_pred             --HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence              1222221111111 12   111223346667788888899999999999999999999999999999877654

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.14  E-value=1.7e-11  Score=116.00  Aligned_cols=233  Identities=18%  Similarity=0.232  Sum_probs=162.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCC
Q 017017          114 FVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEG  193 (379)
Q Consensus       114 ~~~~~~~~~~~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~  193 (379)
                      .+++..+.++.=.++..||+    .|+|.+++.|.+=+++..+||.+++|+++|||-+..-.     ..++.+++++.-+
T Consensus       102 ~r~vlplsvVfi~mI~fnnl----cL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~-----~~C~lIi~GF~lG  172 (347)
T KOG1442|consen  102 ARQVLPLSVVFILMISFNNL----CLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFAL-----GCCLLIILGFGLG  172 (347)
T ss_pred             HHhhcchhheeeeehhccce----ehhhcceEEEEeccchhhhHHHHhHHhhcccccccccc-----eeehhheehheec
Confidence            55666666776677789997    78999999999999999999999999999999988865     4555555554333


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhhccccchhccc
Q 017017          194 SEGPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGE  273 (379)
Q Consensus       194 s~~~~~~~~~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e  273 (379)
                      .|. ++.++.-...|.+.-+.|++.-|+-.+.+    ||+..... .-.-.+..|....|.++++..+.+.||++++-. 
T Consensus       173 vdq-E~~~~~ls~~GvifGVlaSl~vAlnaiyt----kk~l~~v~-~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~-  245 (347)
T KOG1442|consen  173 VDQ-EGSTGTLSWIGVIFGVLASLAVALNAIYT----KKVLPPVG-DCIWRLTAYNNVNALLLFLPLLILNGEFQAVVG-  245 (347)
T ss_pred             ccc-ccccCccchhhhHHHHHHHHHHHHHHHhh----heeccccc-CeehhhHHHHHHHHHHHHHHHHHHcchHHHHcC-
Confidence            222 11223335789999999999999955554    45432211 112235566778888888888889999876633 


Q ss_pred             cccccc-cchHHHHHHHHHHHHHHHHHhh-hhh-hhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHH
Q 017017          274 MQGFGK-GKVSYVMVIVWTAVSWQVCSVG-VVG-LIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIW  350 (379)
Q Consensus       274 ~~~f~~-g~~~y~l~lv~~av~~q~~~~g-v~g-lv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~  350 (379)
                         |.+ +.+.+|..+.-..+.-..  +| ++| .++.+|.++-++-.+.+-....++|+.+++|.-+..-+-+-++++.
T Consensus       246 ---~~~l~a~~Fw~~mtLsglfgF~--mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLv  320 (347)
T KOG1442|consen  246 ---FPHLPAIKFWILMTLSGLFGFA--MGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLV  320 (347)
T ss_pred             ---cccchHHHHHHHHHHHHHHHHH--hhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEe
Confidence               221 223334322222222111  22 222 4556888888888888878889999999999999999999999999


Q ss_pred             HHHHHHhcccccccccc
Q 017017          351 GFASYIYQNYLDDYRSR  367 (379)
Q Consensus       351 G~~~y~y~~~~~~~k~~  367 (379)
                      |...|.+-+..+++|+.
T Consensus       321 gs~~YT~vk~~em~~~~  337 (347)
T KOG1442|consen  321 GSLAYTLVKEHEMRKAS  337 (347)
T ss_pred             hhHHHHHHHHHHHHhhc
Confidence            99999887655555443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.03  E-value=2.6e-10  Score=107.79  Aligned_cols=206  Identities=17%  Similarity=0.173  Sum_probs=123.1

Q ss_pred             HHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhcc-----CCC--CCCCccc
Q 017017          129 AGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVN-----EGS--EGPSKVS  201 (379)
Q Consensus       129 ~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~-----~~s--~~~~~~~  201 (379)
                      .+-.++| +++.|+|.+.+++|.-+.|.||.+|++.++|||+|++..++.++.+.|++++.-.     ++.  ++.++.+
T Consensus       109 tgvmlmy-ya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~  187 (346)
T KOG4510|consen  109 TGVMLMY-YALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVE  187 (346)
T ss_pred             hHHHHHH-HHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccccc
Confidence            3445677 8999999999999999999999999999999999999999999999999998422     211  1111111


Q ss_pred             hhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhhccccchhcccccccccc
Q 017017          202 KWKYILGFISTVGASAIYS-LLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKG  280 (379)
Q Consensus       202 ~~~~~~G~ll~L~Aa~~~a-l~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e~~~f~~g  280 (379)
                        ....|-..++.++..-+ .|.+     .|++.|+-.+.+.+   -|.++++.+..++|...-|++ .+|+.-+++-  
T Consensus       188 --~~~~gt~aai~s~lf~asvyIi-----lR~iGk~~h~~msv---syf~~i~lV~s~I~~~~ig~~-~lP~cgkdr~--  254 (346)
T KOG4510|consen  188 --YDIPGTVAAISSVLFGASVYII-----LRYIGKNAHAIMSV---SYFSLITLVVSLIGCASIGAV-QLPHCGKDRW--  254 (346)
T ss_pred             --ccCCchHHHHHhHhhhhhHHHH-----HHHhhccccEEEEe---hHHHHHHHHHHHHHHhhccce-ecCccccceE--
Confidence              12334444443333332 2333     37766665554322   244667777777887776776 5776433221  


Q ss_pred             chHHHHHHHHHHHHHHH-HHhhhhhhhheehhhHHHHHHHHHHH-HHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHH
Q 017017          281 KVSYVMVIVWTAVSWQV-CSVGVVGLIYVVSSLFSNVISTSSLA-ITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYI  356 (379)
Q Consensus       281 ~~~y~l~lv~~av~~q~-~~~gv~glv~~~ssl~~~vv~~~~~p-ls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~  356 (379)
                         .+..+.-..+.-|+ ...|+-  +-.+.   -+-++++... .+.+..+++||+..|+..++|+++++.....-.
T Consensus       255 ---l~~~lGvfgfigQIllTm~lQ--iErAG---pvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a  324 (346)
T KOG4510|consen  255 ---LFVNLGVFGFIGQILLTMGLQ--IERAG---PVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVA  324 (346)
T ss_pred             ---EEEEehhhhhHHHHHHHHHhh--hhccC---CeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHH
Confidence               01111111112221 112210  00000   0011223333 445688999999999999999998875444433

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.97  E-value=1.9e-07  Score=90.77  Aligned_cols=284  Identities=13%  Similarity=0.152  Sum_probs=167.9

Q ss_pred             HHHHhHhHHHHHHHHHhc-CCCchhhHHHHHhchhhHhhhhhhccccccCCC-CCCCCChhHHHHHHHHHHHHHHHHHHH
Q 017017           56 LIAGQAAAVILGRYYYDQ-GGNSKWLATLVQTAAFPILYIPLFLLPASQEVS-SSSRYPSFVTLALVYLVLGAILAGDNM  133 (379)
Q Consensus        56 l~~g~~~~~ll~r~y~~~-~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~Gl~~~~~nl  133 (379)
                      =.+..+.-++.-++--++ +-|.....-+.|.-.-.+.+   ++-.+-+--+ +.......+|++..    -+++.++-.
T Consensus        20 Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v---~~lk~~~lv~~~~l~~~~~kk~~P~----~~lf~~~i~   92 (314)
T KOG1444|consen   20 YCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVV---LVLKRLGLVNFRPLDLRTAKKWFPV----SLLFVGMLF   92 (314)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH---HHHHHhceeecCCcChHHHHHHccH----HHHHHHHHH
Confidence            334444444555554443 44555555567754444332   1111100001 10011124455444    555566665


Q ss_pred             HHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCccchhhhHHHHHHHH
Q 017017          134 LYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWKYILGFISTV  213 (379)
Q Consensus       134 ly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~~~~~~~~G~ll~L  213 (379)
                      .=..+++|++++++++++...++++++.-..++|.|+++..+.+++++.+|....+..|.+.         ...|....+
T Consensus        93 t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf---------~~~gY~w~~  163 (314)
T KOG1444|consen   93 TGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSF---------NLRGYSWAL  163 (314)
T ss_pred             HccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccccee---------cchhHHHHH
Confidence            55579999999999999999999999999999999999999999999999988876655432         234888888


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhhccccchhccccccccccchHHHHHHHHHHH
Q 017017          214 GASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAV  293 (379)
Q Consensus       214 ~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e~~~f~~g~~~y~l~lv~~av  293 (379)
                      ...++-+.+....    ||..+.... .-.++..|-.+++.++..+-.+..|||+++..+...+.+  ...++.+....+
T Consensus       164 ~n~~~~a~~~v~~----kk~vd~~~l-~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~--~~~~~~~~lScv  236 (314)
T KOG1444|consen  164 ANCLTTAAFVVYV----KKSVDSANL-NKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSD--SSVLVVMLLSCV  236 (314)
T ss_pred             HHHHHHHHHHHHH----HHhhccccc-cceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccc--hhHHHHHHHHHH
Confidence            8998888877775    444332211 112344555667777777766777887644333222211  111222222221


Q ss_pred             HHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHhccccc
Q 017017          294 SWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLD  362 (379)
Q Consensus       294 ~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y~~~~~  362 (379)
                      .=++......--.-..|+++-+++-..-+-.+.+..++++|.++++.+.+|+.+.+.|-+.|.|.++++
T Consensus       237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~  305 (314)
T KOG1444|consen  237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRK  305 (314)
T ss_pred             HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhh
Confidence            111100000000011344444444433334556667777788999999999999999999999976543

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.87  E-value=1.4e-07  Score=90.97  Aligned_cols=217  Identities=17%  Similarity=0.226  Sum_probs=154.2

Q ss_pred             HHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCccchhh
Q 017017          125 GAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWK  204 (379)
Q Consensus       125 Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~~~~~  204 (379)
                      ++.....-.+--.+|+|++--|..+-.+++.+=+|+.+.++-|+|++.+.-....+.+.|+.+-.+.+.+|++.+..+.+
T Consensus        90 s~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~n  169 (327)
T KOG1581|consen   90 SFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGREN  169 (327)
T ss_pred             HHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCC
Confidence            55444444555599999999999999999999999999999999999999999999999988766555444333332346


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhhcccc-chhcccccccc--ccc
Q 017017          205 YILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEW-RTLSGEMQGFG--KGK  281 (379)
Q Consensus       205 ~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~-~~l~~e~~~f~--~g~  281 (379)
                      .++|+.+..+.-++=|+    +.-+.+++.+++. .....|+++..++.++....+++..|.+ +.+.     |-  +-+
T Consensus       170 s~~G~~Ll~~~L~fDgf----Tn~tQd~lf~~~k-~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~-----F~~~hp~  239 (327)
T KOG1581|consen  170 SPIGILLLFGYLLFDGF----TNATQDSLFKKYK-VSSLHMMFGVNLFSAILNGTYLILQGHLLPAVS-----FIKEHPD  239 (327)
T ss_pred             chHhHHHHHHHHHHHhh----HHhHHHHHhccCC-ccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHH-----HHHcChh
Confidence            78999999888887787    4444555544322 2345688888888888888887666643 1111     11  111


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhhhhh--e----ehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHH
Q 017017          282 VSYVMVIVWTAVSWQVCSVGVVGLIY--V----VSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASY  355 (379)
Q Consensus       282 ~~y~l~lv~~av~~q~~~~gv~glv~--~----~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y  355 (379)
                      ....+      +.+..|  |.+|..+  +    -.++.-..+++.+..++.+++.++||.+++..++++..+++.|...=
T Consensus       240 ~~~Di------~l~s~~--gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~  311 (327)
T KOG1581|consen  240 VAFDI------LLYSTC--GAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLE  311 (327)
T ss_pred             HHHHH------HHHHHh--hhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHH
Confidence            22222      222222  2333333  1    34666777889999999999999999999999999999999877765


Q ss_pred             Hhcc
Q 017017          356 IYQN  359 (379)
Q Consensus       356 ~y~~  359 (379)
                      .|-+
T Consensus       312 ~~~k  315 (327)
T KOG1581|consen  312 ILLK  315 (327)
T ss_pred             HHHH
Confidence            6644

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.78  E-value=1.3e-07  Score=86.26  Aligned_cols=214  Identities=17%  Similarity=0.218  Sum_probs=143.3

Q ss_pred             HHHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCccch
Q 017017          123 VLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSK  202 (379)
Q Consensus       123 ~~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~~~  202 (379)
                      ++-++..+.|++|-.+++.++++..+-+.+++-.|+-+++++.+|+|+.-.++.+.++++.|+++++..|.       +.
T Consensus        58 PF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN-------~~  130 (290)
T KOG4314|consen   58 PFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN-------EH  130 (290)
T ss_pred             ceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc-------hh
Confidence            34567788899999999999999999999999999999999999999999999999999999999875432       13


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch---hhHHHHHHHHHHHHHHHHH---HHHhhccccchhcccccc
Q 017017          203 WKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSF---GVVLDMQIYTSFVATCICI---VGLFASGEWRTLSGEMQG  276 (379)
Q Consensus       203 ~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~---~~vle~q~~~~lva~~~~~---vgl~~~g~~~~l~~e~~~  276 (379)
                      ...++|+.++++++...++|    +++||+.+..-.+   .+.+.-.   +++..++..   +-+...|- +.++    +
T Consensus       131 a~e~iGi~~AV~SA~~aAlY----KV~FK~~iGnAn~Gdaa~FmS~L---GF~NL~~~~~~~lIL~~T~V-E~~q----s  198 (290)
T KOG4314|consen  131 ADEIIGIACAVGSAFMAALY----KVLFKMFIGNANFGDAAHFMSCL---GFFNLCFISFPALILAFTGV-EHLQ----S  198 (290)
T ss_pred             hhhhhhHHHHHHHHHHHHHH----HHHHHHHhccCcchhHHHHHHHH---HHHHHHHHhhhHHHHHHhch-HHHH----H
Confidence            44699999999999999995    5558887654322   2222111   111111111   11122221 1121    1


Q ss_pred             ccccchHHHHHHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHH
Q 017017          277 FGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYI  356 (379)
Q Consensus       277 f~~g~~~y~l~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~  356 (379)
                      |...+   |-.+++.+..|.++-.-+.--+.....+.-++=+.+.+|.....-.++=+-.++.....+..++..|+...+
T Consensus       199 FA~~P---WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLii  275 (290)
T KOG4314|consen  199 FAAAP---WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILII  275 (290)
T ss_pred             HhhCC---chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHhee
Confidence            21111   122445555555443332222233455555555667778888877776666778888999999999988876


Q ss_pred             hc
Q 017017          357 YQ  358 (379)
Q Consensus       357 y~  358 (379)
                      ..
T Consensus       276 iP  277 (290)
T KOG4314|consen  276 IP  277 (290)
T ss_pred             cc
Confidence            63

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.77  E-value=5.1e-08  Score=81.68  Aligned_cols=71  Identities=15%  Similarity=0.256  Sum_probs=63.3

Q ss_pred             HHHHHHHH-HHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCC
Q 017017          122 LVLGAILA-GDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEG  193 (379)
Q Consensus       122 ~~~Gl~~~-~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~  193 (379)
                      +..|++.. .++.+|.+|++|.| +..+.+.+++|+|+++++.+++|||++++++.++++.++|++++..++.
T Consensus        38 ~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   38 ILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            34456554 88899999999999 5888999999999999999999999999999999999999999987654

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.63  E-value=2.4e-05  Score=74.07  Aligned_cols=203  Identities=16%  Similarity=0.133  Sum_probs=121.2

Q ss_pred             HHHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCccch
Q 017017          123 VLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSK  202 (379)
Q Consensus       123 ~~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~~~  202 (379)
                      ..|+.++..|++|-.++..+|.++..-+--+.|+-.++++    .+|..-..|++  ++..|..++.-...+.+      
T Consensus        76 ~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~----sRr~~d~vwva--LAvlGi~lL~p~~~~~~------  143 (292)
T COG5006          76 AYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS----SRRLRDFVWVA--LAVLGIWLLLPLGQSVW------  143 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh----ccchhhHHHHH--HHHHHHHhheeccCCcC------
Confidence            3488888888777799999999999988888888777655    56665555655  46667666633222211      


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHH-HHHHHhhccccchhccccccccccc
Q 017017          203 WKYILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCI-CIVGLFASGEWRTLSGEMQGFGKGK  281 (379)
Q Consensus       203 ~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~-~~vgl~~~g~~~~l~~e~~~f~~g~  281 (379)
                      .-+..|..++++|.++|++|.+.+|+.=+    ..+-...+..-   .+++.++ +-+|..-.|.  .+-.    ...=.
T Consensus       144 ~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~----~~~g~~g~a~g---m~vAaviv~Pig~~~ag~--~l~~----p~ll~  210 (292)
T COG5006         144 SLDPVGVALALGAGACWALYIVLGQRAGR----AEHGTAGVAVG---MLVAALIVLPIGAAQAGP--ALFS----PSLLP  210 (292)
T ss_pred             cCCHHHHHHHHHHhHHHHHHHHHcchhcc----cCCCchHHHHH---HHHHHHHHhhhhhhhcch--hhcC----hHHHH
Confidence            22589999999999999999999855443    22211112111   1222222 2244322221  1110    00000


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHH
Q 017017          282 VSYVMVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFAS  354 (379)
Q Consensus       282 ~~y~l~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~  354 (379)
                      ...-+.+..+++-|.+=-+....+-..    .=++.+++++.+..+.+++++||.+|..|+.++.+++.+.+=
T Consensus       211 laLgvavlSSalPYsLEmiAL~rlp~~----~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG  279 (292)
T COG5006         211 LALGVAVLSSALPYSLEMIALRRLPAR----TFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG  279 (292)
T ss_pred             HHHHHHHHhcccchHHHHHHHhhCChh----HHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence            011122444444444433333333222    123344566668899999999999999999999999876653

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.58  E-value=5.1e-07  Score=74.77  Aligned_cols=67  Identities=24%  Similarity=0.372  Sum_probs=61.4

Q ss_pred             HHHHHH-HHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHh
Q 017017          122 LVLGAI-LAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALI  188 (379)
Q Consensus       122 ~~~Gl~-~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll  188 (379)
                      +..|++ .+..+.+|..+++++|++..+.+..++|+++++++++++|||++++++.|+++.++|++++
T Consensus        57 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   57 LFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             hHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            334555 5888899999999999999999999999999999999999999999999999999999876

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=98.38  E-value=8.9e-08  Score=90.34  Aligned_cols=257  Identities=14%  Similarity=0.173  Sum_probs=158.1

Q ss_pred             cCCCchhhHHHHHhchhhHhhhhhhccccccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHh
Q 017017           73 QGGNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICA  152 (379)
Q Consensus        73 ~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~Gl~~~~~nlly~~gL~ylp~st~sli~s  152 (379)
                      +|-|-+=.+|++.-+-..+..-|..++++          +...-.+--|+++++.-.-.|++-..+.+|++-...+++-+
T Consensus        43 k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~----------~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDc  112 (336)
T KOG2766|consen   43 KGINAPTSQTFLNYVLLALVYGPIMLFRR----------KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDC  112 (336)
T ss_pred             ccCCCccHHHHHHHHHHHHHHhhHHHhhh----------HHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHH
Confidence            34455667887775554444444444322          11111112267778877777866668999999999999999


Q ss_pred             hhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017017          153 SQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQK  232 (379)
Q Consensus       153 sql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~~~~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk  232 (379)
                      =..+-.++++++++|-|+.+.++.|+++-..|++++.+.|-..+ +...+.+...|+.+++++|-+||..-..-|..-||
T Consensus       113 waip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~ag-d~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn  191 (336)
T KOG2766|consen  113 WAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAG-DRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKN  191 (336)
T ss_pred             hhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccc-cccCCCCCccCcEEEEecceeeeeccccHHHHHhc
Confidence            99999999999999999999999999999999998866553221 12224567889999999999999954443333333


Q ss_pred             hhcccchhhHHHHHHHHHHHHHHHHHHHHhhccc-cchhccccccccccchHHHHHHHHHHHHHHHHHhhhhhhhheehh
Q 017017          233 VLKRQSFGVVLDMQIYTSFVATCICIVGLFASGE-WRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSS  311 (379)
Q Consensus       233 ~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~-~~~l~~e~~~f~~g~~~y~l~lv~~av~~q~~~~gv~glv~~~ss  311 (379)
                      .    +   ..|..-..++++++...+-.+.+.. -..+.     | +++...|+.   .+++..+..--..-+....++
T Consensus       192 ~----d---~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~-----w-~~~i~~yl~---f~L~MFllYsl~pil~k~~~a  255 (336)
T KOG2766|consen  192 A----D---RVELMGFLGLFGAIISAIQFIFERHHVSTLH-----W-DSAIFLYLR---FALTMFLLYSLAPILIKTNSA  255 (336)
T ss_pred             C----c---HHHHHHHHHHHHHHHHHHHHhhhccceeeEe-----e-hHHHHHHHH---HHHHHHHHHHhhHHheecCCc
Confidence            2    2   3455555678888877776544432 12221     1 122222221   333333333222222222222


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHhc
Q 017017          312 LFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQ  358 (379)
Q Consensus       312 l~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y~  358 (379)
                      ..-|+-....=-.+.+.  -.||-+++|.-.++...+..|+.+|...
T Consensus       256 T~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r  300 (336)
T KOG2766|consen  256 TMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR  300 (336)
T ss_pred             eEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence            21111100000112222  6688889999999999999999998543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.27  E-value=0.00011  Score=70.90  Aligned_cols=113  Identities=13%  Similarity=0.072  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCChhHH-HHHHhhhHHHHHHHHHHHhccccchHHHH----HHHHHHHHHHHhh
Q 017017          115 VTLALVYLVLGAILAGDNMLYSVGLLYLSASTY-SLICASQLAFNAVFSYFINSQKFTALILN----SVVILSLSAALIA  189 (379)
Q Consensus       115 ~~~~~~~~~~Gl~~~~~nlly~~gL~ylp~st~-sli~ssql~Ftalfs~lil~ek~t~~~i~----svvLl~~G~~ll~  189 (379)
                      .+.+..+++.|+..+..|.....+.+++.+|.. =+-...|++.|.+.++++++|--+..++.    ++++..+|+.+..
T Consensus        42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts  121 (269)
T PF06800_consen   42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS  121 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence            377888999999999999888788888777655 34458899999999999999988776654    8888999999887


Q ss_pred             ccCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 017017          190 VNEGSEGPSKVSKWKYILGFISTVGASAIYSLLLSLMQL  228 (379)
Q Consensus       190 ~~~~s~~~~~~~~~~~~~G~ll~L~Aa~~~al~l~l~~~  228 (379)
                      .+++.++. ..++++..-|.+..+.+++.|.+|-.+.+.
T Consensus       122 ~~~~~~~~-~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~  159 (269)
T PF06800_consen  122 YQDKKSDK-SSSKSNMKKGILALLISTIGYWIYSVIPKA  159 (269)
T ss_pred             cccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence            76554331 122345566999999999999999888544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.20  E-value=1.4e-05  Score=67.11  Aligned_cols=65  Identities=8%  Similarity=0.023  Sum_probs=60.1

Q ss_pred             HHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhc
Q 017017          126 AILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAV  190 (379)
Q Consensus       126 l~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~  190 (379)
                      +.++...+++..+++.+|.+..-.+-+++++++++.+++++|||+|++++.|+++.++|+++++.
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            45677889999999999999998888899999999999999999999999999999999998753

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.14  E-value=0.0001  Score=69.52  Aligned_cols=58  Identities=14%  Similarity=0.181  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Q 017017          128 LAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSA  185 (379)
Q Consensus       128 ~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~  185 (379)
                      .+....+|..+++++|+++.+++..++|++++++++++++||+++.++.|.++.+.|+
T Consensus       202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            4667788889999999999999999999999999999999999999999999999885

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.13  E-value=0.00011  Score=74.01  Aligned_cols=69  Identities=7%  Similarity=-0.006  Sum_probs=62.2

Q ss_pred             HHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCC
Q 017017          125 GAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEG  193 (379)
Q Consensus       125 Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~  193 (379)
                      |+..+....+|.+++++++++..++....+|+|++++++++++|++++.+++|.++...|+.+...+..
T Consensus       263 ~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~  331 (358)
T PLN00411        263 AIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKA  331 (358)
T ss_pred             HHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhh
Confidence            344566778999999999999999999999999999999999999999999999999999998865543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=98.07  E-value=0.00019  Score=67.02  Aligned_cols=261  Identities=16%  Similarity=0.184  Sum_probs=150.3

Q ss_pred             CCCchhhHHHHHhchhhHhhhhh-hccccccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHh
Q 017017           74 GGNSKWLATLVQTAAFPILYIPL-FLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICA  152 (379)
Q Consensus        74 ~g~~~w~~t~vq~agfp~l~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~Gl~~~~~nlly~~gL~ylp~st~sli~s  152 (379)
                      |-|.-++.-+||.--...-+..+ ++-..+-|      ..-.++++.++.++    ...-+--+-+++|+|++.|+++..
T Consensus        33 gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR------~t~aK~WfpiSfLL----v~MIyt~SKsLqyL~vpiYTiFKN  102 (309)
T COG5070          33 GFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR------LTKAKKWFPISFLL----VVMIYTSSKSLQYLAVPIYTIFKN  102 (309)
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhHhhee------hhhhhhhcCHHHHH----HHHHHhcccceeeeeeeHHHHhcc
Confidence            55877777778865444422211 11111111      01123444443332    332333346889999999999999


Q ss_pred             hhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017017          153 SQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGSEGPSKVSKWKYILGFISTVGASAIYSLLLSLMQLSFQK  232 (379)
Q Consensus       153 sql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s~~~~~~~~~~~~~G~ll~L~Aa~~~al~l~l~~~~~kk  232 (379)
                      +.++..+..-.+++|.|.+.....+-+++.++.+.-.++|.+.....  .+-.-.|.+.....+...+.+...+    ||
T Consensus       103 ltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~--~~~lN~GY~Wm~~NclssaafVL~m----rk  176 (309)
T COG5070         103 LTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFK--AQILNPGYLWMFTNCLSSAAFVLIM----RK  176 (309)
T ss_pred             ceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHH--hcccCCceEEEehhhHhHHHHHHHH----HH
Confidence            99999999999999999999999999999999888666553221100  0111236666677777777776664    44


Q ss_pred             hhcccchhhHHHHHHHHHHHHHHHHHHHHhhccccchhccccccccccchHHHHHHHHHHHHHHHHHhhhhhhhheehhh
Q 017017          233 VLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGKVSYVMVIVWTAVSWQVCSVGVVGLIYVVSSL  312 (379)
Q Consensus       233 ~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e~~~f~~g~~~y~l~lv~~av~~q~~~~gv~glv~~~ssl  312 (379)
                      .+|-+.+. -.|-.+|-.+.+.++.+.--+..+||..- .-..++..-      .+.|-+++ .+|.+|..--..|.-.+
T Consensus       177 ri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~-n~annl~~d------~l~am~IS-gl~svgiSy~saWcvrV  247 (309)
T COG5070         177 RIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPG-NLANNLSVD------SLMAMFIS-GLCSVGISYCSAWCVRV  247 (309)
T ss_pred             hhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcc-hhhcCCChH------HHHHHHHH-HHHHhhhhhccceeEee
Confidence            44433322 13345566666666666433344466421 112233211      12222221 22334432223333333


Q ss_pred             H----HHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHhcc
Q 017017          313 F----SNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQN  359 (379)
Q Consensus       313 ~----~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y~~  359 (379)
                      +    -+.+..+-.....+.+.++||++.+..++.++.+-+..-++|.+.+
T Consensus       248 tSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavak  298 (309)
T COG5070         248 TSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAK  298 (309)
T ss_pred             hhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence            3    3333333333446678899999999999999999888888887753

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.02  E-value=0.00017  Score=70.92  Aligned_cols=67  Identities=25%  Similarity=0.309  Sum_probs=59.1

Q ss_pred             HHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCC
Q 017017          127 ILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEG  193 (379)
Q Consensus       127 ~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~  193 (379)
                      +++.++.+-..++.+.|++..+=+.+.+++++++++.+++|||++++.+.|.++..+|.+++.....
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~  125 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAP  125 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCC
Confidence            3456666666899999999999999999999999999999999999999999999999988765443

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.99  E-value=0.00018  Score=62.43  Aligned_cols=124  Identities=19%  Similarity=0.124  Sum_probs=88.0

Q ss_pred             HHHHHHHHhc------CCCchhhHHHHHhchhhHhhhhhhccccccC-C--CCCCC--CChhHHHHHHHHHHHHHHHHHH
Q 017017           64 VILGRYYYDQ------GGNSKWLATLVQTAAFPILYIPLFLLPASQE-V--SSSSR--YPSFVTLALVYLVLGAILAGDN  132 (379)
Q Consensus        64 ~ll~r~y~~~------~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~-~--~~~~~--~p~~~~~~~~~~~~Gl~~~~~n  132 (379)
                      .++.+...++      .-+..=+.......++++++++.++.-..+. .  .+...  .....+....-+..|+.....|
T Consensus        16 ~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n   95 (153)
T PF03151_consen   16 NVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFLYN   95 (153)
T ss_pred             HHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHHHH
Confidence            3355555444      2233445666777778887776665422211 0  00000  0012244555566788888888


Q ss_pred             HHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Q 017017          133 MLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAAL  187 (379)
Q Consensus       133 lly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~l  187 (379)
                      +.-..-++++++.|++++...+-+.+.++++++++|++|..++.|+++.++|+.+
T Consensus        96 ~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   96 LSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            8888999999999999999999999999999999999999999999999999865

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.97  E-value=4.4e-05  Score=65.30  Aligned_cols=120  Identities=14%  Similarity=0.154  Sum_probs=86.6

Q ss_pred             hHHHHHHHHHh-cCCCchhhHHHHHhchhhHhhhhhhccccccC-CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017017           62 AAVILGRYYYD-QGGNSKWLATLVQTAAFPILYIPLFLLPASQE-VSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGL  139 (379)
Q Consensus        62 ~~~ll~r~y~~-~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~Gl~~~~~nlly~~gL  139 (379)
                      ..++..+.=-+ .+.+   ++|.+-+.-....+....+..-+.. ..+     ..+|.+..-++.|+..++.-++|..++
T Consensus        17 L~~iF~KIGl~~vdp~---~At~IRtiVi~~~l~~v~~~~g~~~~~~~-----~~~k~~lflilSGla~glswl~Yf~AL   88 (140)
T COG2510          17 LTPIFAKIGLEGVDPD---FATTIRTIVILIFLLIVLLVTGNWQAGGE-----IGPKSWLFLILSGLAGGLSWLLYFRAL   88 (140)
T ss_pred             HHHHHHHHhccccCcc---HHHHHHHHHHHHHHHHHHHhcCceecccc-----cCcceehhhhHHHHHHHHHHHHHHHHH
Confidence            55666666444 3555   7777765443333222222211111 111     233555566788999999999999999


Q ss_pred             ccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhh
Q 017017          140 LYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIA  189 (379)
Q Consensus       140 ~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~  189 (379)
                      +.=++|-..=+-.++++++++|+++++|||.|..+|+|+++.++|++++.
T Consensus        89 k~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          89 KKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             hcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            99999888889999999999999999999999999999999999998864

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.87  E-value=0.0004  Score=67.53  Aligned_cols=69  Identities=13%  Similarity=0.141  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhc
Q 017017          122 LVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAV  190 (379)
Q Consensus       122 ~~~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~  190 (379)
                      +..|+..+..+.+|.++++++|++..+++...+|++++++++++++|++++.+++|.++.+.|+.+...
T Consensus       219 ~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        219 LLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            345566778889999999999999999999999999999999999999999999999999999887644

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.83  E-value=0.001  Score=64.71  Aligned_cols=68  Identities=13%  Similarity=0.101  Sum_probs=60.4

Q ss_pred             HHHH-HHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhcc
Q 017017          124 LGAI-LAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVN  191 (379)
Q Consensus       124 ~Gl~-~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~  191 (379)
                      .|+. .+....+|.++++++|++..+++..++|++++++++++++|++++.+++|.++.++|++.....
T Consensus       214 lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        214 VAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            3443 4566678899999999999999999999999999999999999999999999999998887543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.82  E-value=0.00033  Score=68.25  Aligned_cols=122  Identities=14%  Similarity=0.124  Sum_probs=90.5

Q ss_pred             HHhHhHHHHHHHHHhcCCCchhhHHHHHhchhhHhhhhhhccccccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 017017           58 AGQAAAVILGRYYYDQGGNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSV  137 (379)
Q Consensus        58 ~g~~~~~ll~r~y~~~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~Gl~~~~~nlly~~  137 (379)
                      ++-++..+..|.. +   -+.+-.++.|..|..+-...++..+.  ++     +|...+........|++.+..+.+|..
T Consensus       162 ~~y~~~~~~~~~~-~---~~~~~~~~~~~~g~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~Gi~~~ia~~~y~~  230 (290)
T TIGR00776       162 IGYLVYVVVAKAF-G---VDGLSVLLPQAIGMVIGGIIFNLGHI--LA-----KPLKKYAILLNILPGLMWGIGNFFYLF  230 (290)
T ss_pred             HHHHHHHHHHHHc-C---CCcceehhHHHHHHHHHHHHHHHHHh--cc-----cchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3334555566643 2   44567777787766665443333321  11     122233333455689999999999999


Q ss_pred             hhc-cCChhHHHHHHhhhHHHHHHHHHHHhccccchHHH----HHHHHHHHHHHHhhc
Q 017017          138 GLL-YLSASTYSLICASQLAFNAVFSYFINSQKFTALIL----NSVVILSLSAALIAV  190 (379)
Q Consensus       138 gL~-ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i----~svvLl~~G~~ll~~  190 (379)
                      +++ +.++++++++.+..|+.+++++++++||+.+++++    +|.++...|+.+++.
T Consensus       231 ~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       231 SAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            999 99999999999999999999999999999999999    999999999988754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=97.72  E-value=0.0011  Score=64.56  Aligned_cols=72  Identities=10%  Similarity=0.097  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhcc
Q 017017          120 VYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVN  191 (379)
Q Consensus       120 ~~~~~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~  191 (379)
                      .....|+..+.-+.+|..+++++|++..+++...+|+++.++++++++|++++.++.|.++..+|+.++..+
T Consensus       215 ~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~  286 (296)
T PRK15430        215 LLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD  286 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            344456667788899999999999999999999999999999999999999999999999998888877543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.67  E-value=0.00012  Score=70.56  Aligned_cols=71  Identities=14%  Similarity=0.202  Sum_probs=62.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHh
Q 017017          118 ALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALI  188 (379)
Q Consensus       118 ~~~~~~~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll  188 (379)
                      +......++..+..+.+|.+++++.|++..+.+..++|+++.++++++++|++++.+++|.++.++|+.++
T Consensus       211 ~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l~  281 (281)
T TIGR03340       211 LPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVVL  281 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHhC
Confidence            33334556667788889999999999999999999999999999999999999999999999999998763

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.62  E-value=0.0023  Score=62.07  Aligned_cols=64  Identities=5%  Similarity=0.015  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhcc
Q 017017          128 LAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVN  191 (379)
Q Consensus       128 ~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~  191 (379)
                      .+....+|.+++++++++..+++..++|++++++++++++|++++.+++|.++...|+.++...
T Consensus       223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            4677789999999999999999999999999999999999999999999999999999887543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.56  E-value=0.036  Score=55.51  Aligned_cols=109  Identities=17%  Similarity=0.227  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCChhHH-HHHHhhhHHHHHHHHHHHhccc-------cchHHHHHHHHHHHHHH
Q 017017          115 VTLALVYLVLGAILAGDNMLYSVGLLYLSASTY-SLICASQLAFNAVFSYFINSQK-------FTALILNSVVILSLSAA  186 (379)
Q Consensus       115 ~~~~~~~~~~Gl~~~~~nlly~~gL~ylp~st~-sli~ssql~Ftalfs~lil~ek-------~t~~~i~svvLl~~G~~  186 (379)
                      .+.+..+++.|++.+..|..+..+.+|+-+|.. .+-.-+|++++.++..++++|=       -...-+.|+++.++|++
T Consensus        70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~  149 (345)
T PRK13499         70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA  149 (345)
T ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence            366778899999999999999999999888866 6777899999999999998752       22457889999999999


Q ss_pred             Hhhc----cCCCCCCCccchhhhHHHHHHHHHHHHHHHHHH
Q 017017          187 LIAV----NEGSEGPSKVSKWKYILGFISTVGASAIYSLLL  223 (379)
Q Consensus       187 ll~~----~~~s~~~~~~~~~~~~~G~ll~L~Aa~~~al~l  223 (379)
                      +.+.    .+..++.++.++.+..-|++.++.+.+.|+.|-
T Consensus       150 l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~  190 (345)
T PRK13499        150 IVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFS  190 (345)
T ss_pred             HHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHH
Confidence            9876    333221111234556779999999999999987

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.49  E-value=0.0018  Score=55.55  Aligned_cols=129  Identities=15%  Similarity=0.236  Sum_probs=76.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhhccccchhccccccccccchHHHH--
Q 017017          209 FISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGKVSYVM--  286 (379)
Q Consensus       209 ~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e~~~f~~g~~~y~l--  286 (379)
                      .+.++.+|+++|+--..++...|.+ ..+....++      ..+...++..-++..|.|+ .+.|.    +.+...|+  
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IR------tiVi~~~l~~v~~~~g~~~-~~~~~----~~k~~lflil   72 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIR------TIVILIFLLIVLLVTGNWQ-AGGEI----GPKSWLFLIL   72 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHH------HHHHHHHHHHHHHhcCcee-ccccc----CcceehhhhH
Confidence            4677888888888555544444432 111112222      2333334444455677764 43321    22222233  


Q ss_pred             HHHHHHHHHHHHHhh-hhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHH
Q 017017          287 VIVWTAVSWQVCSVG-VVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFAS  354 (379)
Q Consensus       287 ~lv~~av~~q~~~~g-v~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~  354 (379)
                      .=+.++++|++.+.. ..|-...+-.+-+     ..+.++.+++++++||++|..+++|.+++..|...
T Consensus        73 SGla~glswl~Yf~ALk~G~as~VvPldk-----~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gail  136 (140)
T COG2510          73 SGLAGGLSWLLYFRALKKGKASRVVPLDK-----TSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAIL  136 (140)
T ss_pred             HHHHHHHHHHHHHHHHhcCCcceEEEccc-----ccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeee
Confidence            345667888887754 3343334333333     44567889999999999999999999999998754

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.48  E-value=0.0011  Score=56.59  Aligned_cols=68  Identities=12%  Similarity=0.180  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHHHhhccCChhHH-HHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccC
Q 017017          125 GAILAGDNMLYSVGLLYLSASTY-SLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNE  192 (379)
Q Consensus       125 Gl~~~~~nlly~~gL~ylp~st~-sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~  192 (379)
                      -+.++...++++.+++++|.++. ++......+.+++.++++++|++|+.++.++.+.++|++++-..+
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            35557777888999999999876 777889999999999999999999999999999999999885543

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.44  E-value=0.00081  Score=65.41  Aligned_cols=62  Identities=15%  Similarity=-0.091  Sum_probs=56.3

Q ss_pred             HHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhc
Q 017017          129 AGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAV  190 (379)
Q Consensus       129 ~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~  190 (379)
                      ..-|.++..++++++++++++....+|++++++++++++|++|..++.|.++.++|+.+...
T Consensus       232 ~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       232 HFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            34446777899999999999999999999999999999999999999999999999988754

specificities overlap.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.38  E-value=0.0078  Score=58.60  Aligned_cols=66  Identities=6%  Similarity=-0.030  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhcc
Q 017017          126 AILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVN  191 (379)
Q Consensus       126 l~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~  191 (379)
                      +-.+....+|..+++++++++.+++...+|++++++++++++|++++.+++|.++.++|+.+...+
T Consensus       223 ~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        223 VATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            334567788999999999999999999999999999999999999999999999999999876554

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=97.36  E-value=0.002  Score=52.96  Aligned_cols=66  Identities=11%  Similarity=0.205  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHh
Q 017017          288 IVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIY  357 (379)
Q Consensus       288 lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y  357 (379)
                      ++.+++.+.+...+.    .+.+....+.+....++++.+++++++||+++..+++|+++++.|.....|
T Consensus        61 ~~~~~~~~~~~~~a~----~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~~  126 (126)
T PF00892_consen   61 LLGTALAYLLYFYAL----KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIST  126 (126)
T ss_pred             ccceehHHHHHHHHH----HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHC
Confidence            333444444444442    233444455556666678899999999999999999999999999887653

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.33  E-value=0.0019  Score=53.74  Aligned_cols=65  Identities=8%  Similarity=0.057  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHhhccCChhHH-HHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhc
Q 017017          126 AILAGDNMLYSVGLLYLSASTY-SLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAV  190 (379)
Q Consensus       126 l~~~~~nlly~~gL~ylp~st~-sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~  190 (379)
                      +.+.....+.+.+++++|.+++ ++-.-...+-+++.++++++|++++.+++++.+..+|++.+-.
T Consensus        38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            3346666788889999999875 9999999999999999999999999999999999999998744

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.25  E-value=0.0023  Score=53.68  Aligned_cols=63  Identities=14%  Similarity=0.067  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHHhhccCChhHH-HHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHh
Q 017017          126 AILAGDNMLYSVGLLYLSASTY-SLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALI  188 (379)
Q Consensus       126 l~~~~~nlly~~gL~ylp~st~-sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll  188 (379)
                      +.++...++.+.+++++|.++. ++-.....+.+++.++++++|++|+.++.++.+.+.|++.+
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            4456677888899999999875 99999999999999999999999999999999999999886

>TIGR00688 rarD rarD protein

Probab=97.24  E-value=0.013  Score=55.44  Aligned_cols=137  Identities=15%  Similarity=0.181  Sum_probs=77.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhhccccchhccccccccccchH--HH
Q 017017          208 GFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGKVS--YV  285 (379)
Q Consensus       208 G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e~~~f~~g~~~--y~  285 (379)
                      |.++.+.|+++||......+.. ..       ....++.++-.+++.++...-+...++++...+..+...+.+..  ..
T Consensus         3 g~~~~i~a~~~wg~~~~~~k~~-~~-------~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (256)
T TIGR00688         3 GIIVSLLASFLFGYMYYYSKLL-KP-------LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLL   74 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHh-cc-------CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHH
Confidence            8899999999999977775432 11       12455666667776655544333333322111000101011111  11


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHH
Q 017017          286 MVIVWTAVSWQVCSVGVVGLIYVVSSLFSNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYI  356 (379)
Q Consensus       286 l~lv~~av~~q~~~~gv~glv~~~ssl~~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~  356 (379)
                      +.-+..++.+.....++    .+++...++++....+..+.++++++++|+++..+++++++.+.|...-.
T Consensus        75 ~~g~~~~~~~~~~~~a~----~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        75 LCGLLIGFNWWLFIWAV----NNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHHHH----HcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            11111223333333442    23344445555555555889999999999999999999999999987653

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.19  E-value=0.0023  Score=55.25  Aligned_cols=66  Identities=18%  Similarity=0.093  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHH--HhccccchHHHHHHHHHHHHHHHhhcc
Q 017017          126 AILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYF--INSQKFTALILNSVVILSLSAALIAVN  191 (379)
Q Consensus       126 l~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~l--il~ek~t~~~i~svvLl~~G~~ll~~~  191 (379)
                      +.++....+|.++++..|++...-+.+....++++.++.  +++|++|+.+++|+++.++|+.++..+
T Consensus        56 ~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         56 AGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            344666688999999999999988888888888888885  899999999999999999999998543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.19  E-value=0.0039  Score=52.40  Aligned_cols=66  Identities=9%  Similarity=0.163  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHhhccCChhHH-HHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhcc
Q 017017          126 AILAGDNMLYSVGLLYLSASTY-SLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVN  191 (379)
Q Consensus       126 l~~~~~nlly~~gL~ylp~st~-sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~  191 (379)
                      +.++....+++.+++.+|.++. ++-.....+.+++.++++++|++|+.++.++.+.++|++++-..
T Consensus        38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3446666778899999999876 77788999999999999999999999999999999999998543

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.17  E-value=0.0035  Score=52.20  Aligned_cols=64  Identities=9%  Similarity=0.008  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHhhccCChhHH-HHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhh
Q 017017          126 AILAGDNMLYSVGLLYLSASTY-SLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIA  189 (379)
Q Consensus       126 l~~~~~nlly~~gL~ylp~st~-sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~  189 (379)
                      +.++...++.+.+++.+|.++. ++-.....+.+++.+++++||++|+.++.++.+..+|++.+-
T Consensus        37 ~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         37 TAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            3446677888899999999875 899999999999999999999999999999999999999874

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=96.99  E-value=0.015  Score=48.35  Aligned_cols=48  Identities=17%  Similarity=0.299  Sum_probs=39.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHhcccc
Q 017017          314 SNVISTSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYL  361 (379)
Q Consensus       314 ~~vv~~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y~~~~  361 (379)
                      ...+....+.++.+++.++|+|+++..++++.++++.|++.-.+++..
T Consensus        63 v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   63 VAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            334444555578999999999999999999999999999998886543

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=96.95  E-value=0.035  Score=52.23  Aligned_cols=72  Identities=19%  Similarity=0.283  Sum_probs=62.0

Q ss_pred             HHHHHHHHHH-HHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhcc
Q 017017          120 VYLVLGAILA-GDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVN  191 (379)
Q Consensus       120 ~~~~~Gl~~~-~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~  191 (379)
                      .....|+... ..+.+|..+++..+++..+.+..+.+++++++++++++|++++.++.|.++.+.|..+....
T Consensus       216 ~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         216 LLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            3344455555 47788889999999999999999999999999999999999999999999999998887543

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=96.76  E-value=0.0077  Score=60.30  Aligned_cols=66  Identities=18%  Similarity=-0.004  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhh
Q 017017          124 LGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIA  189 (379)
Q Consensus       124 ~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~  189 (379)
                      .|+.....|.+-.++++++++.++++....+++++.++++++++|++|+.+++|.++.+.|+.+..
T Consensus       282 s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        282 SGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            344444444333379999999999999999999999999999999999999999999999998753

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.53  E-value=0.0083  Score=58.91  Aligned_cols=68  Identities=13%  Similarity=0.180  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccCCC
Q 017017          127 ILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNEGS  194 (379)
Q Consensus       127 ~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~~s  194 (379)
                      .++..+..=.-+..+-|++--+=+.+++++++++++..+++||++..-.+|.++..+|..++..+...
T Consensus        73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~  140 (335)
T KOG2922|consen   73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPK  140 (335)
T ss_pred             HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCc
Confidence            33444444446778889999999999999999999999999999999999999999999888766543

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.20  E-value=0.018  Score=46.65  Aligned_cols=54  Identities=9%  Similarity=-0.009  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHHhhccCChhHH-HHHHhhhHHHHHHHHHHHhccccchHHHHHHHH
Q 017017          127 ILAGDNMLYSVGLLYLSASTY-SLICASQLAFNAVFSYFINSQKFTALILNSVVI  180 (379)
Q Consensus       127 ~~~~~nlly~~gL~ylp~st~-sli~ssql~Ftalfs~lil~ek~t~~~i~svvL  180 (379)
                      .++...++++.+++++|.++. .+......+.+.+.+.++++|++|+.++.++.+
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l   92 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence            457777899999999999987 888889999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.19  E-value=0.11  Score=52.19  Aligned_cols=117  Identities=13%  Similarity=0.086  Sum_probs=79.1

Q ss_pred             CCCchhhHHHHHhchhhHhhhhhh----ccc--cccC-C--CCC-CCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 017017           74 GGNSKWLATLVQTAAFPILYIPLF----LLP--ASQE-V--SSS-SRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLS  143 (379)
Q Consensus        74 ~g~~~w~~t~vq~agfp~l~~~~~----~~~--~~~~-~--~~~-~~~p~~~~~~~~~~~~Gl~~~~~nlly~~gL~ylp  143 (379)
                      .|.+.|-..+.|.++.-+=....-    ...  ++++ +  ++. .++|...|-.+.+++.|++...+|..|.+|-+.++
T Consensus       206 ~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g  285 (345)
T PRK13499        206 LGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLG  285 (345)
T ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            466777888888774443221111    111  1111 0  111 12233456777889999999999999999888875


Q ss_pred             hhHHH----HHHhhhHHHHHHHHHHHhccccc------hHHHHHHHHHHHHHHHhhcc
Q 017017          144 ASTYS----LICASQLAFNAVFSYFINSQKFT------ALILNSVVILSLSAALIAVN  191 (379)
Q Consensus       144 ~st~s----li~ssql~Ftalfs~lil~ek~t------~~~i~svvLl~~G~~ll~~~  191 (379)
                      +++..    +-.|+.+++..+-+. ++||+=+      +..+.++++..+|+++++.+
T Consensus       286 ~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        286 AQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             CccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            55443    444899999999998 5998877      77788999999999888765

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=96.14  E-value=0.091  Score=51.28  Aligned_cols=59  Identities=14%  Similarity=0.162  Sum_probs=51.4

Q ss_pred             HHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhc
Q 017017          131 DNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAV  190 (379)
Q Consensus       131 ~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~  190 (379)
                      ++..+ .-.+..++.+.+++.++.-+++.++++++.++++++.+|.|+++.+.|..+-..
T Consensus       239 ~~~i~-~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  239 QFFIF-YLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY  297 (303)
T ss_pred             HHHHH-HHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence            33444 457779999999999999999999999999999999999999999999887544

; GO: 0055085 transmembrane transport

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=95.88  E-value=0.04  Score=52.69  Aligned_cols=75  Identities=15%  Similarity=0.095  Sum_probs=59.8

Q ss_pred             hHHHHHHHHHHHHHHHHHH-HHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHh
Q 017017          114 FVTLALVYLVLGAILAGDN-MLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALI  188 (379)
Q Consensus       114 ~~~~~~~~~~~Gl~~~~~n-lly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll  188 (379)
                      .+.++..+...|++...-- .+=..++..+|..+++++.+..|.+.++-++++++|++|+.||.+++....+++=.
T Consensus       205 ~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~  280 (292)
T COG5006         205 SPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGS  280 (292)
T ss_pred             ChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcc
Confidence            4455555555565544332 45557899999999999999999999999999999999999999998888776643

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.79  E-value=0.39  Score=41.80  Aligned_cols=107  Identities=21%  Similarity=0.210  Sum_probs=72.5

Q ss_pred             CCCchhhHHHHHhchhhHhhhhhhccccccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHH-HHHHh
Q 017017           74 GGNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTY-SLICA  152 (379)
Q Consensus        74 ~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~Gl~~~~~nlly~~gL~ylp~st~-sli~s  152 (379)
                      -|+-.+-+...+..|+..+.+..++...+ +.+...+.|   ++.....++|.....-+.   +....+.++.. .+...
T Consensus        27 ~gs~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~~~~~p---~w~~lGG~lG~~~V~~~~---~~vp~lG~~~~~~l~~~   99 (138)
T PF04657_consen   27 LGSPLVASFISFGVGFILLLIILLITGRP-SLASLSSVP---WWAYLGGLLGVFFVLSNI---ILVPRLGAALTTILIVA   99 (138)
T ss_pred             hCccHHHHHHHHHHHHHHHHHHHHHhccc-ccchhccCC---hHHhccHHHHHHHHHHHH---HHhhhhhHHHHHHHHHH
Confidence            45445555566777888876666655332 111111223   444456666666555544   56677777766 55667


Q ss_pred             hhHHHHHHHHHH----HhccccchHHHHHHHHHHHHHHH
Q 017017          153 SQLAFNAVFSYF----INSQKFTALILNSVVILSLSAAL  187 (379)
Q Consensus       153 sql~Ftalfs~l----il~ek~t~~~i~svvLl~~G~~l  187 (379)
                      -|++..+++-.+    .-|+|+++.++.|++++.+|+.+
T Consensus       100 GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen  100 GQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            799999999987    67999999999999999999864

>TIGR00803 nst UDP-galactose transporter

Probab=95.64  E-value=0.028  Score=52.21  Aligned_cols=62  Identities=15%  Similarity=0.204  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Q 017017          125 GAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAA  186 (379)
Q Consensus       125 Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~  186 (379)
                      ++..+....+..+-++|.+..+.++..++..++++++++++++|+++..++.|+.+.+.|..
T Consensus       159 ~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~  220 (222)
T TIGR00803       159 GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATF  220 (222)
T ss_pred             HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeE
Confidence            45566677777789999999999999999999999999999999999999999998887653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=95.48  E-value=0.23  Score=48.14  Aligned_cols=93  Identities=17%  Similarity=0.102  Sum_probs=67.9

Q ss_pred             CCchhhHHHHHhchhhHhhhhhhccccccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHhhh
Q 017017           75 GNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYSLICASQ  154 (379)
Q Consensus        75 g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~Gl~~~~~nlly~~gL~ylp~st~sli~ssq  154 (379)
                      +-+.|-.-+-|..|.-+-.+-+.+.. +++..   ++. +++    -+..|++.+..|+.|..+.+..-++++=.+.|+.
T Consensus       161 ~~~~~~~~lPqaiGm~i~a~i~~~~~-~~~~~---~k~-~~~----nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~  231 (269)
T PF06800_consen  161 HVSGWSAFLPQAIGMLIGAFIFNLFS-KKPFF---EKK-SWK----NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLG  231 (269)
T ss_pred             CCChhHhHHHHHHHHHHHHHHHhhcc-ccccc---ccc-hHH----hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHH
Confidence            34557788888888866433222221 11111   111 222    3556999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccccchHHHH
Q 017017          155 LAFNAVFSYFINSQKFTALILN  176 (379)
Q Consensus       155 l~Ftalfs~lil~ek~t~~~i~  176 (379)
                      ++...+.+.+++||+=+++++.
T Consensus       232 vvIStlgGI~il~E~Kt~ke~~  253 (269)
T PF06800_consen  232 VVISTLGGIFILKEKKTKKEMI  253 (269)
T ss_pred             HHHHHhhhheEEEecCchhhHH
Confidence            9999999999999999988664

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=95.48  E-value=0.39  Score=46.77  Aligned_cols=135  Identities=13%  Similarity=0.220  Sum_probs=76.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHhhccccchhccccccccccchHHH
Q 017017          206 ILGFISTVGASAIYSLLLSLMQLSFQKVLKRQSFGVVLDMQIYTSFVATCICIVGLFASGEWRTLSGEMQGFGKGKVSYV  285 (379)
Q Consensus       206 ~~G~ll~L~Aa~~~al~l~l~~~~~kk~~~~~~~~~vle~q~~~~lva~~~~~vgl~~~g~~~~l~~e~~~f~~g~~~y~  285 (379)
                      .-|+++++.|.++||+    .-.++|-+ +.-+   ..|+..+-.+-+.++.++-+...+.|+++..   -.++.+....
T Consensus         6 ~~Gil~~l~Ay~lwG~----lp~y~kll-~~~~---~~eIlahRviwS~~~~l~ll~~~r~~~~~~~---~~~~p~~~~~   74 (293)
T COG2962           6 RKGILLALLAYLLWGL----LPLYFKLL-EPLP---ATEILAHRVIWSFPFMLALLFLLRQWRELKQ---LLKQPKTLLM   74 (293)
T ss_pred             cchhHHHHHHHHHHHH----HHHHHHHH-ccCC---HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH---HHhCcHHHHH
Confidence            4499999999999999    33334433 3222   3344444444444444444444555655532   1222222111


Q ss_pred             H--HHHHHHHHHHHHHhhhh-hhhheehhhHHHHHHHHHHH-HHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHh
Q 017017          286 M--VIVWTAVSWQVCSVGVV-GLIYVVSSLFSNVISTSSLA-ITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIY  357 (379)
Q Consensus       286 l--~lv~~av~~q~~~~gv~-glv~~~ssl~~~vv~~~~~p-ls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y  357 (379)
                      .  +-.--..+|.++.+.++ |.+-.     ++. .-..-| +..+++.++++|+++..|+++.+++..|+..-..
T Consensus        75 ~~l~a~li~~nW~lfiWAvn~g~~le-----aSL-GY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~  144 (293)
T COG2962          75 LALTALLIGLNWWLFIWAVNNGHVLE-----ASL-GYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW  144 (293)
T ss_pred             HHHHHHHHHHHHHHhheecCCCchhH-----HHh-HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence            1  12222256666655532 12221     111 112336 5577999999999999999999999999887644

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=95.07  E-value=0.55  Score=40.07  Aligned_cols=35  Identities=14%  Similarity=0.333  Sum_probs=30.8

Q ss_pred             HHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHH
Q 017017          321 SLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASY  355 (379)
Q Consensus       321 ~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y  355 (379)
                      ....+.+.++++|||++|..|++|+.+++.|+..-
T Consensus        67 G~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l  101 (120)
T PRK10452         67 GILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLI  101 (120)
T ss_pred             HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHh
Confidence            44566789999999999999999999999999775

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=94.71  E-value=0.45  Score=47.59  Aligned_cols=126  Identities=13%  Similarity=0.075  Sum_probs=85.8

Q ss_pred             hHHHHHHHHHhcCCCchhhHHHHHhchhhHhhhhhhccccccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017017           62 AAVILGRYYYDQGGNSKWLATLVQTAAFPILYIPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYSVGLLY  141 (379)
Q Consensus        62 ~~~ll~r~y~~~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~Gl~~~~~nlly~~gL~y  141 (379)
                      +++.++++.-.+ -++.=...++-.-|+.+..+...+..+ +.   .+..+...+...+.+...+.+.....+....+.+
T Consensus       182 ~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~-~~---i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~  256 (334)
T PF06027_consen  182 VSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILER-SG---IESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRM  256 (334)
T ss_pred             HHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheeh-hh---hhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            445566654433 344445677777788776655544322 11   1111223344444444555555555566778888


Q ss_pred             CChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccC
Q 017017          142 LSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNE  192 (379)
Q Consensus       142 lp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~  192 (379)
                      .++...++=..+..++++++..++.++++++..++|.++..+|.++....+
T Consensus       257 ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  257 SSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             CccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence            999888888889999999999999999999999999999999998875544

Some of the sequences in this family are annotated as putative membrane proteins.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=94.56  E-value=0.083  Score=44.61  Aligned_cols=62  Identities=13%  Similarity=0.139  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHHHhhccCChhHHHHH-HhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Q 017017          126 AILAGDNMLYSVGLLYLSASTYSLI-CASQLAFNAVFSYFINSQKFTALILNSVVILSLSAAL  187 (379)
Q Consensus       126 l~~~~~nlly~~gL~ylp~st~sli-~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~l  187 (379)
                      ++......+|.+.+...|.|...-+ +++..+||++.++++-+|..+++.+.|+++.++|+.+
T Consensus        49 ~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   49 LLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            4445555788899999999988666 5999999999999999999999999999999999865

Many members are annotated as potential transmembrane proteins.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=93.86  E-value=0.57  Score=39.19  Aligned_cols=36  Identities=14%  Similarity=0.207  Sum_probs=31.4

Q ss_pred             HHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHH
Q 017017          320 SSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASY  355 (379)
Q Consensus       320 ~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y  355 (379)
                      .....+.++++++|||++|..|++|+.+++.|+..-
T Consensus        72 l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         72 LNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            444577889999999999999999999999998753

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=93.13  E-value=1.2  Score=37.21  Aligned_cols=36  Identities=17%  Similarity=0.377  Sum_probs=31.2

Q ss_pred             HHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHH
Q 017017          320 SSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASY  355 (379)
Q Consensus       320 ~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y  355 (379)
                      +....+.+.++++|||+++..|++++.+++.|...-
T Consensus        66 iG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L  101 (106)
T COG2076          66 IGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL  101 (106)
T ss_pred             HHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence            344567889999999999999999999999998764

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=93.04  E-value=0.75  Score=45.25  Aligned_cols=38  Identities=16%  Similarity=0.274  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHh
Q 017017          320 SSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIY  357 (379)
Q Consensus       320 ~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y  357 (379)
                      +.+....++|.+++||+++...++|.++++.|......
T Consensus        85 ~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   85 LSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             hhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence            44567788999999999999999999999999887654

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=92.92  E-value=0.0074  Score=57.33  Aligned_cols=115  Identities=14%  Similarity=0.135  Sum_probs=85.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHH-HHHhhhHHHHHHHHHHHhccccchHHH----HHHHHHHHHHHH
Q 017017          113 SFVTLALVYLVLGAILAGDNMLYSVGLLYLSASTYS-LICASQLAFNAVFSYFINSQKFTALIL----NSVVILSLSAAL  187 (379)
Q Consensus       113 ~~~~~~~~~~~~Gl~~~~~nlly~~gL~ylp~st~s-li~ssql~Ftalfs~lil~ek~t~~~i----~svvLl~~G~~l  187 (379)
                      .+.+.++.++..|.+.+..|..-.-+.+++.+|... +-..+|++-+.+|+.+.++|=-+..++    .++++..+|+.+
T Consensus        54 ~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~l  133 (288)
T COG4975          54 LTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYL  133 (288)
T ss_pred             cchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheE
Confidence            466888899999999999998777888876666553 344689999999999999998888775    466667777766


Q ss_pred             hhccCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 017017          188 IAVNEGSEGPSKVSKWKYILGFISTVGASAIYSLLLSLMQL  228 (379)
Q Consensus       188 l~~~~~s~~~~~~~~~~~~~G~ll~L~Aa~~~al~l~l~~~  228 (379)
                      -..+++.++ ++++.+++--|+...+.+++.|=.|.++.|.
T Consensus       134 Ts~~~~~nk-~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~  173 (288)
T COG4975         134 TSKQDRNNK-EEENPSNLKKGIVILLISTLGYVGYVVLFQL  173 (288)
T ss_pred             eeeeccccc-cccChHhhhhheeeeeeeccceeeeEeeecc
Confidence            555543222 1223445677998888899999888777543

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=92.04  E-value=3.4  Score=39.35  Aligned_cols=119  Identities=18%  Similarity=0.121  Sum_probs=73.3

Q ss_pred             HHHHHhHhHHHHHHHHHhcCCCchhhHHHHHhchhhHhh--hhhhccccccCCCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 017017           55 FLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAFPILY--IPLFLLPASQEVSSSSRYPSFVTLALVYLVLGAILAGDN  132 (379)
Q Consensus        55 ~l~~g~~~~~ll~r~y~~~~g~~~w~~t~vq~agfp~l~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~Gl~~~~~n  132 (379)
                      ..+++..+++..+|...+++ .+.|+.. +|.+-+-++.  +..++....+..++.....++...+.    .=+..+.+-
T Consensus       122 ~~~~S~~agVy~E~~lK~~~-~s~~~~N-~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~----~i~~~a~gG  195 (244)
T PF04142_consen  122 AAFLSGFAGVYFEKLLKRSN-VSLWIQN-MQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWI----VIFLQAIGG  195 (244)
T ss_pred             HHHHHHHHHHHHHHHhcccc-hhHHHHH-HHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHH----HHHHHHHhh
Confidence            33444455555666665555 7888888 6665554443  22222111100111111112222221    123445566


Q ss_pred             HHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHH
Q 017017          133 MLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVV  179 (379)
Q Consensus       133 lly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svv  179 (379)
                      ++-+.-++|.|.-.=....+...+.|+++++++++.++|....+|.+
T Consensus       196 llva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~  242 (244)
T PF04142_consen  196 LLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA  242 (244)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence            77778899999999999999999999999999999999998877654

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=91.98  E-value=1.3  Score=38.16  Aligned_cols=34  Identities=12%  Similarity=0.171  Sum_probs=27.9

Q ss_pred             HHHHHHHHH--HhCCcchhHHHHHHHHHHHHHHHHH
Q 017017          323 AITPVVSVI--VFHDKVNGVKVIAMLMAIWGFASYI  356 (379)
Q Consensus       323 pls~ilavl--~fge~ls~~k~ig~~lvl~G~~~y~  356 (379)
                      .++.++++.  +|||++|..+++|+++++.|+..-.
T Consensus        86 ~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~  121 (129)
T PRK02971         86 ALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            345556663  8999999999999999999988854

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=91.52  E-value=1.9  Score=36.19  Aligned_cols=35  Identities=14%  Similarity=0.260  Sum_probs=31.0

Q ss_pred             HHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHH
Q 017017          321 SLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASY  355 (379)
Q Consensus       321 ~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y  355 (379)
                      ....+.+.++++|||++|+.+.+|+.+++.|+..-
T Consensus        67 G~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l  101 (110)
T PRK09541         67 GIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVI  101 (110)
T ss_pred             HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            34566889999999999999999999999998885

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=91.43  E-value=1.9  Score=43.08  Aligned_cols=168  Identities=15%  Similarity=0.231  Sum_probs=101.8

Q ss_pred             HHHHHHHHHHhHhHHHHHHHHH--hcCCCchhhHHHHHhchhhHhhhhhhccccccCC--CCCCCCChhHHHHHHHHHHH
Q 017017           50 VVNIFFLIAGQAAAVILGRYYY--DQGGNSKWLATLVQTAAFPILYIPLFLLPASQEV--SSSSRYPSFVTLALVYLVLG  125 (379)
Q Consensus        50 ~~~~~~l~~g~~~~~ll~r~y~--~~~g~~~w~~t~vq~agfp~l~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~G  125 (379)
                      ++-+++-.+|..++..   +|-  .+--+=.|=+.|+--.-|.-++.|.......-|+  +-....|.  ..+...++.|
T Consensus         6 i~Gii~h~iGg~~~~s---fy~P~kkvk~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~--~~l~~~~l~G   80 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGS---FYVPFKKVKGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPA--STLFWTFLFG   80 (344)
T ss_pred             HHHHHHHHHHHHHhhh---hccchhhcCCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCCh--hHHHHHHHHH
Confidence            3444455566544432   332  2233345667777767777777776644332121  10011222  2344557789


Q ss_pred             HHHHHHHHHHHHhhccCChhHH-HHHHhhhHHHHHHHHHHHh-------ccccchHHHHHHHHHHHHHHHhhccC---CC
Q 017017          126 AILAGDNMLYSVGLLYLSASTY-SLICASQLAFNAVFSYFIN-------SQKFTALILNSVVILSLSAALIAVNE---GS  194 (379)
Q Consensus       126 l~~~~~nlly~~gL~ylp~st~-sli~ssql~Ftalfs~lil-------~ek~t~~~i~svvLl~~G~~ll~~~~---~s  194 (379)
                      ++.+..++.|-.+++|+-.|.- ++..-+..++-.+.--++.       .++-.+..+.|+++..+|+++.+...   +.
T Consensus        81 ~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~  160 (344)
T PF06379_consen   81 VLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEK  160 (344)
T ss_pred             HHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhh
Confidence            9999999999999999877643 4555555555555544443       33445688999999999999986432   12


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHHHHH
Q 017017          195 EGPSKVSKWKYILGFISTVGASAIYSLL  222 (379)
Q Consensus       195 ~~~~~~~~~~~~~G~ll~L~Aa~~~al~  222 (379)
                      +...+.++.+.-.|.++++.+.++++..
T Consensus       161 ~~~~~~~efn~~kGl~iAv~sGv~Sa~f  188 (344)
T PF06379_consen  161 ELGEEAKEFNFKKGLIIAVLSGVMSACF  188 (344)
T ss_pred             hhccchhhhhhhhhHHHHHHHHHHHHHH
Confidence            2223334556678999999998888874

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=91.40  E-value=4.7  Score=33.80  Aligned_cols=35  Identities=20%  Similarity=0.299  Sum_probs=30.3

Q ss_pred             HHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHH
Q 017017          320 SSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFAS  354 (379)
Q Consensus       320 ~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~  354 (379)
                      +....+.+.++++|||++|+.|++++.+++.|+..
T Consensus        71 iG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~  105 (109)
T PRK10650         71 FGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVM  105 (109)
T ss_pred             HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence            33456688999999999999999999999999875

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=90.41  E-value=0.66  Score=44.17  Aligned_cols=67  Identities=10%  Similarity=0.053  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhc
Q 017017          124 LGAILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAV  190 (379)
Q Consensus       124 ~Gl~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~  190 (379)
                      +++...+.|++-..-+.+-.+-+-+++.++.-.||.+.|.+++..+++.+||+|-++.+.|..+-..
T Consensus       247 ~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  247 LAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             HHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence            3666677776666777887888889999999999999999999999999999999999988665433

>PRK11431 multidrug efflux system protein; Provisional

Probab=89.79  E-value=2.8  Score=34.89  Aligned_cols=36  Identities=3%  Similarity=0.252  Sum_probs=30.9

Q ss_pred             HHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHH
Q 017017          320 SSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASY  355 (379)
Q Consensus       320 ~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y  355 (379)
                      +....+.+.++++|||++|+.+++++.+++.|+..-
T Consensus        65 iG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         65 IGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            334566889999999999999999999999998764

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=88.52  E-value=2.4  Score=42.84  Aligned_cols=67  Identities=10%  Similarity=0.138  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccC
Q 017017          126 AILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNE  192 (379)
Q Consensus       126 l~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~  192 (379)
                      +......++|.+|.-.+++-+.++=.+.+++..+++-.++-++++|+..++|.+..++|-+++...+
T Consensus       326 igtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  326 IGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             HHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence            3347788999999999999999999999999999999999999999999999999999988875543

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=86.06  E-value=0.35  Score=47.98  Aligned_cols=61  Identities=21%  Similarity=0.084  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHh
Q 017017          127 ILAGDNMLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALI  188 (379)
Q Consensus       127 ~~~~~nlly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll  188 (379)
                      ..+.|..-| +-+..+++-|+++....+-++..+.++++++++.|+.++.|..++++|+.+-
T Consensus       245 ~f~~Nls~f-~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y  305 (316)
T KOG1441|consen  245 AFLLNLSAF-LVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLY  305 (316)
T ss_pred             HHHHHHHHH-HHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHH
Confidence            334455555 9999999999999999999999999999999999999999999999999885

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=86.01  E-value=5.8  Score=38.75  Aligned_cols=56  Identities=18%  Similarity=0.164  Sum_probs=45.6

Q ss_pred             HHHHHhhccCChhHHHHHHhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhh
Q 017017          133 MLYSVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIA  189 (379)
Q Consensus       133 lly~~gL~ylp~st~sli~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~  189 (379)
                      ..|..+-. ++.-|.+++....=.+..++|.+.++.++|++.|+|..+.++|..+-+
T Consensus       258 gVy~L~te-~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa  313 (330)
T KOG1583|consen  258 GVYILTTE-TSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA  313 (330)
T ss_pred             hhhhhhce-ecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence            33433333 555666778888889999999999999999999999999999988764

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=81.26  E-value=0.39  Score=46.46  Aligned_cols=54  Identities=7%  Similarity=0.117  Sum_probs=42.0

Q ss_pred             HHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHhccccccccccccCCCCCC
Q 017017          322 LAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQNYLDDYRSRKSRYDGET  375 (379)
Q Consensus       322 ~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y~~~~~~~k~~~~~~~~~~  375 (379)
                      +.++.++|+++++|++|.....+..+.+.|+.....-.+.=....+.+++++.|
T Consensus       134 Pvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~  187 (346)
T KOG4510|consen  134 PVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVE  187 (346)
T ss_pred             hHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccccc
Confidence            347889999999999999999999999999998877666544444444444433

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	379
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.17
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.11
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.02
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	94.98

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.17  E-value=9.5e-06  Score=66.76  Aligned_cols=68  Identities=10%  Similarity=0.136  Sum_probs=60.5

Q ss_pred             HHHHHHHHHHHHHhhccCChhHHHHH-HhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccC
Q 017017          125 GAILAGDNMLYSVGLLYLSASTYSLI-CASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNE  192 (379)
Q Consensus       125 Gl~~~~~nlly~~gL~ylp~st~sli-~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~  192 (379)
                      .+.++...++|..+++++|.++..-+ ..+.++++++.++++++|++|+.++.|+++..+|++++...+
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34556777888899999999999666 899999999999999999999999999999999999986643

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.11  E-value=6e-06  Score=70.77  Aligned_cols=68  Identities=10%  Similarity=0.136  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHHHHhhccCChhHHHHH-HhhhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhhccC
Q 017017          125 GAILAGDNMLYSVGLLYLSASTYSLI-CASQLAFNAVFSYFINSQKFTALILNSVVILSLSAALIAVNE  192 (379)
Q Consensus       125 Gl~~~~~nlly~~gL~ylp~st~sli-~ssql~Ftalfs~lil~ek~t~~~i~svvLl~~G~~ll~~~~  192 (379)
                      .+.++...++|..+++++|++....+ ..+.+++++++++++++|++|+.+++|+++.++|++++...+
T Consensus        37 i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34556777899999999999977666 899999999999999999999999999999999999987644

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.02  E-value=0.0015  Score=55.82  Aligned_cols=40  Identities=13%  Similarity=0.167  Sum_probs=28.4

Q ss_pred             HHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHhc
Q 017017          319 TSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIYQ  358 (379)
Q Consensus       319 ~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y~  358 (379)
                      .+.+.++.++++++|||++++.+++|+++++.|+......
T Consensus        65 ~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           65 GVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3455577889999999999999999999999999887654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=94.98  E-value=0.22  Score=40.26  Aligned_cols=39  Identities=13%  Similarity=0.185  Sum_probs=33.5

Q ss_pred             HHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHHHHHHHh
Q 017017          319 TSSLAITPVVSVIVFHDKVNGVKVIAMLMAIWGFASYIY  357 (379)
Q Consensus       319 ~~~~pls~ilavl~fge~ls~~k~ig~~lvl~G~~~y~y  357 (379)
                      ...+.++.++++++|||++|..+++|+.+++.|+.....
T Consensus        65 g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           65 GVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (110)
T ss_pred             hHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            345557788999999999999999999999999887644

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00