Citrus Sinensis ID: 017027
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 379 | ||||||
| 255560321 | 379 | conserved hypothetical protein [Ricinus | 0.941 | 0.941 | 0.851 | 0.0 | |
| 224100615 | 384 | predicted protein [Populus trichocarpa] | 0.965 | 0.953 | 0.795 | 1e-176 | |
| 449434498 | 378 | PREDICTED: uncharacterized protein LOC10 | 0.947 | 0.949 | 0.788 | 1e-174 | |
| 147769861 | 388 | hypothetical protein VITISV_004134 [Viti | 0.952 | 0.930 | 0.780 | 1e-172 | |
| 225450256 | 388 | PREDICTED: uncharacterized protein LOC10 | 0.952 | 0.930 | 0.780 | 1e-172 | |
| 356575494 | 386 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.981 | 0.722 | 1e-165 | |
| 255647393 | 386 | unknown [Glycine max] | 1.0 | 0.981 | 0.720 | 1e-165 | |
| 356534675 | 382 | PREDICTED: uncharacterized protein LOC10 | 0.973 | 0.965 | 0.729 | 1e-163 | |
| 18410028 | 379 | protein trichome birefringence-like 36 [ | 0.949 | 0.949 | 0.647 | 1e-140 | |
| 297820162 | 379 | hypothetical protein ARALYDRAFT_485823 [ | 0.955 | 0.955 | 0.639 | 1e-139 |
| >gi|255560321|ref|XP_002521177.1| conserved hypothetical protein [Ricinus communis] gi|223539624|gb|EEF41208.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/357 (85%), Positives = 332/357 (92%)
Query: 23 GKSSQFGLETDEFWLNEEDSEVNMVQSRRDSSRHCDFTSGKWVYDPSYPLYDSNCPYLST 82
GKSSQFGLE WLNEEDSEV+MVQ+R DSS CDFTSGKWVYD SYPLYDS+CPYLST
Sbjct: 23 GKSSQFGLEDGLSWLNEEDSEVDMVQTRHDSSSSCDFTSGKWVYDQSYPLYDSSCPYLST 82
Query: 83 AVSCQKNGRPDSDYQKWKWKPHACSIPRFDALKYLAKMRRKRIMLVGDSIMRNQWESLVC 142
+V+C++NGRPDSDY+KW+WKPHACS+PRFDALK+L KMR+KRIMLVGDSIMRNQWESLVC
Sbjct: 83 SVTCKRNGRPDSDYEKWRWKPHACSVPRFDALKFLGKMRKKRIMLVGDSIMRNQWESLVC 142
Query: 143 LVQGVVPMGRKKVTYNGLSMAFHALDFETSIEFSWAPLLVELMKGPENKRILHLDLIEDN 202
LVQGV+P G K V YNG SMAFHALDFETSIEF+WAPLLVEL K ENKRILHLD+IE+N
Sbjct: 143 LVQGVIPTGHKMVHYNGPSMAFHALDFETSIEFTWAPLLVELKKEAENKRILHLDMIEEN 202
Query: 203 ARYWRGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLN 262
ARYWR D+LVFDSAHWWTHS++WSSWDYYMEG+S+ K MNPMIAY+KGLTTWAKWIDLN
Sbjct: 203 ARYWRNVDILVFDSAHWWTHSDKWSSWDYYMEGQSLIKSMNPMIAYQKGLTTWAKWIDLN 262
Query: 263 IDPRRTRVIFRSMSPRHNRENGWKCYKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYL 322
+DPRRTRVIFRSMSPRHNR+NGWKCYKQRTPLAFFSHQH+PEQLVVLKEVLR+M FPVYL
Sbjct: 263 LDPRRTRVIFRSMSPRHNRDNGWKCYKQRTPLAFFSHQHIPEQLVVLKEVLRKMSFPVYL 322
Query: 323 QDITTMSALRRDGHPSVYRRAMGQEERQHSKDFSSDCSHWCLPGVPDSWNEMLSALL 379
QDITTMSALRRDGHPSVYRRA+ QEERQH +DFSSDCSHWCLPGVPD WNEMLSALL
Sbjct: 323 QDITTMSALRRDGHPSVYRRAISQEERQHPRDFSSDCSHWCLPGVPDIWNEMLSALL 379
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224100615|ref|XP_002311947.1| predicted protein [Populus trichocarpa] gi|222851767|gb|EEE89314.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449434498|ref|XP_004135033.1| PREDICTED: uncharacterized protein LOC101204429 [Cucumis sativus] gi|449512799|ref|XP_004164142.1| PREDICTED: uncharacterized protein LOC101230513 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|147769861|emb|CAN74465.1| hypothetical protein VITISV_004134 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225450256|ref|XP_002269148.1| PREDICTED: uncharacterized protein LOC100251081 [Vitis vinifera] gi|296080994|emb|CBI18592.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356575494|ref|XP_003555875.1| PREDICTED: uncharacterized protein LOC100803650 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255647393|gb|ACU24162.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356534675|ref|XP_003535878.1| PREDICTED: uncharacterized protein LOC100305461 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|18410028|ref|NP_566996.1| protein trichome birefringence-like 36 [Arabidopsis thaliana] gi|15451108|gb|AAK96825.1| putative protein [Arabidopsis thaliana] gi|20148379|gb|AAM10080.1| putative protein [Arabidopsis thaliana] gi|332645684|gb|AEE79205.1| protein trichome birefringence-like 36 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297820162|ref|XP_002877964.1| hypothetical protein ARALYDRAFT_485823 [Arabidopsis lyrata subsp. lyrata] gi|297323802|gb|EFH54223.1| hypothetical protein ARALYDRAFT_485823 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 379 | ||||||
| TAIR|locus:2080280 | 379 | TBL36 "AT3G54260" [Arabidopsis | 0.907 | 0.907 | 0.667 | 2.5e-136 | |
| TAIR|locus:2178813 | 402 | PMR5 "AT5G58600" [Arabidopsis | 0.844 | 0.796 | 0.420 | 5.9e-73 | |
| TAIR|locus:2041574 | 367 | TBL39 "AT2G42570" [Arabidopsis | 0.878 | 0.907 | 0.398 | 1.6e-70 | |
| TAIR|locus:2055878 | 364 | AT2G31110 "AT2G31110" [Arabido | 0.823 | 0.857 | 0.424 | 7e-70 | |
| TAIR|locus:2029959 | 380 | TBL38 "AT1G29050" [Arabidopsis | 0.828 | 0.826 | 0.419 | 4.9e-69 | |
| TAIR|locus:2170184 | 608 | TBR [Arabidopsis thaliana (tax | 0.875 | 0.546 | 0.396 | 6.3e-69 | |
| TAIR|locus:2055425 | 385 | TBL37 "AT2G34070" [Arabidopsis | 0.833 | 0.820 | 0.409 | 8e-69 | |
| TAIR|locus:2096094 | 475 | TBL6 "AT3G62390" [Arabidopsis | 0.828 | 0.661 | 0.394 | 5.6e-68 | |
| TAIR|locus:2088659 | 556 | TBL1 "AT3G12060" [Arabidopsis | 0.860 | 0.586 | 0.394 | 8.2e-67 | |
| TAIR|locus:2045688 | 398 | TBL45 "AT2G30010" [Arabidopsis | 0.846 | 0.806 | 0.405 | 1.1e-66 |
| TAIR|locus:2080280 TBL36 "AT3G54260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1335 (475.0 bits), Expect = 2.5e-136, P = 2.5e-136
Identities = 235/352 (66%), Positives = 289/352 (82%)
Query: 33 DEFWLNEEDSEVNMVQSRRDS-SRHCDFTSGKWVYDPSYPLYDSNCPYLSTAVSCQKNGR 91
DE WL +D +N +Q+RR+ CD++ GKW +D +YPLYDS+CPYLS+A+SCQ+NGR
Sbjct: 26 DELWLVGDDDPLNALQTRRERREERCDYSVGKWTFDETYPLYDSSCPYLSSALSCQRNGR 85
Query: 92 PDSDYQKWKWKPHACSIPRFDALKYLAKMRRKRIMLVGDSIMRNQWESLVCLVQGVVPMG 151
PDS YQKW+W P ACS+PRFDALK+L KMR KRIMLVGDS+MRNQWESLVCLVQ V+P
Sbjct: 86 PDSYYQKWRWIPKACSLPRFDALKFLGKMRGKRIMLVGDSMMRNQWESLVCLVQSVLPTH 145
Query: 152 RKKVTYNGLSMAFHALDFETSIEFSWAPLLVELMKGPENKRILHLDLIEDNARYWRGADV 211
RKK+TYNG +M+FH+LDFETSIEF WAPLLVEL +G + KR+LHLD IEDNARYWRG DV
Sbjct: 146 RKKLTYNGPTMSFHSLDFETSIEFCWAPLLVELKRGVDRKRVLHLDSIEDNARYWRGVDV 205
Query: 212 LVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVI 271
LVFDSAHWWTHS++WSSWDYYM+G ++K M+PM+AYE+GLTTWAKW+++N+DP +T+VI
Sbjct: 206 LVFDSAHWWTHSQRWSSWDYYMDGNKIFKAMDPMVAYERGLTTWAKWVEINLDPSKTKVI 265
Query: 272 FRSMSPRHNRENGWKCYKQRTPLAFFSHQ---HVPEQLVVLKEVLRRMRFPVYLQDITTM 328
FR++SPR E+G CY Q+ PL S HVP+Q VL +VLR M++ VYL DITTM
Sbjct: 266 FRTVSPR---ESGQMCYNQKHPLPSLSSSTKPHVPQQSRVLNKVLRTMKYRVYLYDITTM 322
Query: 329 SALRRDGHPSVYRRAMGQEERQHS-KDFSSDCSHWCLPGVPDSWNEMLSALL 379
SA RRDGHPSV++RAM +EE+ H SSDCSHWCLPGVPD WNEMLS+++
Sbjct: 323 SAYRRDGHPSVFKRAMHEEEKHHRIAGPSSDCSHWCLPGVPDIWNEMLSSII 374
|
|
| TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.00080178 | SubName- Full=Putative uncharacterized protein; (385 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 379 | |||
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 1e-108 | |
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 4e-98 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 1e-24 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
Score = 321 bits (824), Expect = e-108
Identities = 151/354 (42%), Positives = 214/354 (60%), Gaps = 17/354 (4%)
Query: 38 NEEDSEVNMVQSRRDSSRHCDFTSGKWVYDPSYPLYD-SNCPYLSTA-VSCQKNGRPDSD 95
N + +Q+ + + C G WV D SYPLY S+CP + +CQ GRPDSD
Sbjct: 37 NHHSNRRPSLQANQST---CALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSD 93
Query: 96 YQKWKWKPHACSIPRFDALKYLAKMRRKRIMLVGDSIMRNQWESLVCLVQGVVPMGRKKV 155
Y K++W+P C +PRF+ L++L KM+ K +M VGDS+ RNQWESL+CL+ VP R ++
Sbjct: 94 YLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQM 153
Query: 156 TYNGLSMAFHALDFETSIEFSWAPLLVELMKGPENKRILHLDLIEDNARYWRGADVLVFD 215
+ F LD+ SI F AP LV++ + KR+L L+ I NA WR ADVL+F+
Sbjct: 154 SRGDPLSTFKFLDYGVSISFYKAPYLVDI-DAVQGKRVLKLEEISGNANAWRDADVLIFN 212
Query: 216 SAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSM 275
+ HWW+H WDY G + Y+ M+ ++A EK L TWA W+D N+D RTRV F+S+
Sbjct: 213 TGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSI 272
Query: 276 SPRHNRENGW---------KCYKQRTPLAFFSHQHV-PEQLVVLKEVLRRMRFPVYLQDI 325
SP H + W CY + TP++ ++ P+Q+ V+ EV+R M P YL DI
Sbjct: 273 SPTHYNPSEWSAGASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDI 332
Query: 326 TTMSALRRDGHPSVYRRAMGQEERQHSKDFSSDCSHWCLPGVPDSWNEMLSALL 379
T +S LR+DGHPS+Y + +R + D S+DCSHWCLPG+PD+WN++ L
Sbjct: 333 TLLSELRKDGHPSIYSGDLSPSQRANP-DRSADCSHWCLPGLPDTWNQLFYTAL 385
|
Length = 387 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 379 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.93 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.58 | |
| cd01841 | 174 | NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa | 96.71 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 96.14 | |
| cd01838 | 199 | Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd | 95.79 | |
| cd01834 | 191 | SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG | 95.51 | |
| COG2845 | 354 | Uncharacterized protein conserved in bacteria [Fun | 92.79 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 88.2 | |
| cd04502 | 171 | SGNH_hydrolase_like_7 Members of the SGNH-hydrolas | 87.55 | |
| cd01831 | 169 | Endoglucanase_E_like Endoglucanase E-like members | 86.56 | |
| cd01836 | 191 | FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee | 81.59 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-112 Score=839.58 Aligned_cols=327 Identities=45% Similarity=0.919 Sum_probs=300.5
Q ss_pred CCCCCCCcCccCceeeCCCCCCCCCC-CC-CCCcCcccccCCCCCcccccceeecCCCCCCCCCHHHHHHHHcCCeEEEE
Q 017027 51 RDSSRHCDFTSGKWVYDPSYPLYDSN-CP-YLSTAVSCQKNGRPDSDYQKWKWKPHACSIPRFDALKYLAKMRRKRIMLV 128 (379)
Q Consensus 51 ~~~~~~Cd~~~G~WV~d~~~PlY~~~-Cp-~i~~~~~C~~nGRpd~~y~~wrWqP~~C~lprfd~~~fl~~lrgK~i~FV 128 (379)
.++.+.||+|+|+||+|+++|+|+++ || ||++++||++|||||++|++|||||++|+||||||.+||++||||+|+||
T Consensus 47 ~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FV 126 (387)
T PLN02629 47 QANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFV 126 (387)
T ss_pred CCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEe
Confidence 46678999999999999999999998 99 99999999999999999999999999999999999999999999999999
Q ss_pred ecchhHHHHHHHHHhhcccCCCcceEEeecCCeeEEEEecCceEEEEEEccccccccCCCCCceeEEecccchhhcccCC
Q 017027 129 GDSIMRNQWESLVCLVQGVVPMGRKKVTYNGLSMAFHALDFETSIEFSWAPLLVELMKGPENKRILHLDLIEDNARYWRG 208 (379)
Q Consensus 129 GDSl~Rn~~~SL~clL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv~~~~~~~~~~~l~lD~~d~~~~~w~~ 208 (379)
||||+|||||||+|||++++|...+.+...++..+|+|++||+||+||||||||+.+..+ ..+.++||++|..++.|++
T Consensus 127 GDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~-~~~~l~LD~id~~a~~w~~ 205 (387)
T PLN02629 127 GDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQ-GKRVLKLEEISGNANAWRD 205 (387)
T ss_pred ccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCC-CceeEEecCcchhhhhhcc
Confidence 999999999999999999998766666667788999999999999999999999987653 4578999999988889999
Q ss_pred ccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCc---
Q 017027 209 ADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGW--- 285 (379)
Q Consensus 209 ~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W--- 285 (379)
+|||||||||||.+.+....+++++.|+.++++|++.+||++||+||++||++++++.+|+|||||+||+||+||+|
T Consensus 206 ~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~g 285 (387)
T PLN02629 206 ADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAG 285 (387)
T ss_pred CCEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCC
Confidence 99999999999999887777889999999899999999999999999999999999999999999999999999999
Q ss_pred ------ccccCCccCcccCCCCch-HHHHHHHHHHHhcCCceEEeecccccccccCCCCCcccccCchhhhcCCCCCCCC
Q 017027 286 ------KCYKQRTPLAFFSHQHVP-EQLVVLKEVLRRMRFPVYLQDITTMSALRRDGHPSVYRRAMGQEERQHSKDFSSD 358 (379)
Q Consensus 286 ------~C~~~t~P~~~~~~~~~~-~~~~~~~~~~~~~~~~v~lLDit~ms~~R~D~HP~~y~~~~~~~~~~~~~~~~~D 358 (379)
+|+++|+|+.++++.+.. .+++++++++++++.+|+|||||+||++|||||||+|+++ .++++++++..++|
T Consensus 286 g~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~-~~~~~~~~p~~~~D 364 (387)
T PLN02629 286 ASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGD-LSPSQRANPDRSAD 364 (387)
T ss_pred CCCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCC-CchhhccCCCCCCC
Confidence 299999999987776544 5667999999999999999999999999999999999863 34555566677899
Q ss_pred cccccCCCcchHHHHHHHhhC
Q 017027 359 CSHWCLPGVPDSWNEMLSALL 379 (379)
Q Consensus 359 C~HWClPG~~D~WN~lL~~~L 379 (379)
|+||||||||||||||||++|
T Consensus 365 C~HWCLPGvpDTWNelL~a~L 385 (387)
T PLN02629 365 CSHWCLPGLPDTWNQLFYTAL 385 (387)
T ss_pred cccccCCCCCccHHHHHHHHH
Confidence 999999999999999999986
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins | Back alignment and domain information |
|---|
| >cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >COG2845 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans | Back alignment and domain information |
|---|
| >cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 379 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-09 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.9 bits (139), Expect = 3e-09
Identities = 60/391 (15%), Positives = 119/391 (30%), Gaps = 115/391 (29%)
Query: 35 FWLNEEDSEVNMVQSRRDSSRHCDFTSGKWVYDPSYPLYDSNCPYLSTAVSCQKNGRPDS 94
FW E MVQ + ++ K++ P + P + T + ++ R +
Sbjct: 68 FWTLLSKQE-EMVQKFVEEVLRINY---KFLMSPIK--TEQRQPSMMTRMYIEQRDRLYN 121
Query: 95 DYQKWKWKPHACSIPRFDALK-YLAKMRRKRIMLV------GDSIMRNQWESLVCLVQGV 147
D Q + K + + + L+ L ++R + +L+ G + + VCL V
Sbjct: 122 DNQVFA-KYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALD----VCLSYKV 176
Query: 148 VP----------MGRK---------------KVTYNGLSMAFHALDFETSIEFSWAPLLV 182
+ ++ N S + H+ + + I S L
Sbjct: 177 QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH-SIQAELR 235
Query: 183 ELMKGPENKRILHLDLIEDN---ARYWRGAD----VLVFDSAHWWTHSEQWSSWDYYMEG 235
L+K + L L+ N A+ W + +L+ T + D+
Sbjct: 236 RLLKSKPYENCL---LVLLNVQNAKAWNAFNLSCKILL-------T-TRFKQVTDFLSAA 284
Query: 236 KSVYKVMNPMIAYEKGLTT------WAKWID----------LNIDPRRTRVIFRSMSPRH 279
+ + ++ LT K++D L +PRR +I S+
Sbjct: 285 TTTHISLDHH---SMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGL 341
Query: 280 NRENGWK-------------CYKQRTP---------LAFF-SHQHVPEQ-LVVL-----K 310
+ WK P L+ F H+P L ++ K
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIK 401
Query: 311 EVLRRMRFPVYLQDITTMSALRRDGHPSVYR 341
+ + + + S + + S
Sbjct: 402 SDVMVV-----VNKLHKYSLVEKQPKESTIS 427
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 379 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 97.75 | |
| 4hf7_A | 209 | Putative acylhydrolase; PF13472 family, structural | 96.27 | |
| 1yzf_A | 195 | Lipase/acylhydrolase; structural GENO PSI, protein | 81.23 | |
| 3dci_A | 232 | Arylesterase; SGNH_hydrolase SUBF structural genom | 80.48 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00015 Score=63.84 Aligned_cols=91 Identities=14% Similarity=0.181 Sum_probs=57.1
Q ss_pred CCccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCcc
Q 017027 207 RGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWK 286 (379)
Q Consensus 207 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~ 286 (379)
..+|+|||+.|..=.. ...+.|+..|+++++.+.+. .++++|++-+..|..... +
T Consensus 73 ~~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~~~--~- 127 (200)
T 4h08_A 73 TKFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRTGE--G- 127 (200)
T ss_dssp SCCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEESG--G-
T ss_pred CCCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCcccc--c-
Confidence 3589999999976211 12457888999998888764 467889999988843211 0
Q ss_pred cccCCccCcccCCCC-chHHHHHHHHHHHhcCCceEEeecccccc
Q 017027 287 CYKQRTPLAFFSHQH-VPEQLVVLKEVLRRMRFPVYLQDITTMSA 330 (379)
Q Consensus 287 C~~~t~P~~~~~~~~-~~~~~~~~~~~~~~~~~~v~lLDit~ms~ 330 (379)
.. ....... ..+++++++++.++ .++.++|++..+.
T Consensus 128 -----~~-~~~~~~~~~~~~n~~~~~~a~~--~~v~~iD~~~~~~ 164 (200)
T 4h08_A 128 -----MK-EFAPITERLNVRNQIALKHINR--ASIEVNDLWKVVI 164 (200)
T ss_dssp -----GC-EECTHHHHHHHHHHHHHHHHHH--TTCEEECHHHHHT
T ss_pred -----cc-ccchhHHHHHHHHHHHHHHhhh--cceEEEecHHhHh
Confidence 00 0000000 01467778887775 3688999877654
|
| >4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 | Back alignment and structure |
|---|
| >3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 379 | |||
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 97.35 | |
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 97.16 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 82.57 |
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: YxiM C-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=97.35 E-value=0.00028 Score=60.31 Aligned_cols=93 Identities=9% Similarity=0.078 Sum_probs=49.9
Q ss_pred cCCccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCc
Q 017027 206 WRGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGW 285 (379)
Q Consensus 206 w~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W 285 (379)
.+..|+|||..|.-=... .+ -...+.|+..++++++.+.+ .+..+++-+..| +....
T Consensus 69 ~~~~D~vvi~~G~ND~~~----------~~------~~~~~~~~~~l~~li~~~~~----~~~~~vl~~~~~-~~~~~-- 125 (208)
T d2o14a2 69 IKPGDYFMLQLGINDTNP----------KH------KESEAEFKEVMRDMIRQVKA----KGADVILSTPQG-RATDF-- 125 (208)
T ss_dssp CCTTCEEEEECCTGGGCG----------GG------CCCHHHHHHHHHHHHHHHHT----TTCEEEEECCCC-CTTCB--
T ss_pred cCCCCEEEEEcCCCcccc----------cc------cccHHHHHHHHHHHHHHHHh----cCCceeeccccc-ccccc--
Confidence 345799999988652110 00 12356788888888887754 233455544433 11100
Q ss_pred ccccCCccCcccCCCCchHHHHHHHHHHHhcCCceEEeecccccc
Q 017027 286 KCYKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTMSA 330 (379)
Q Consensus 286 ~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLDit~ms~ 330 (379)
.. . .+.. ....+.+++++++.++. .+.++|++.++.
T Consensus 126 ~~--~-~~~~----~~~~~~~~~~~~~a~~~--~v~~vD~~~~~~ 161 (208)
T d2o14a2 126 TS--E-GIHS----SVNRWYRASILALAEEE--KTYLIDLNVLSS 161 (208)
T ss_dssp CT--T-SCBC----CTTSTTHHHHHHHHHHT--TCEEECHHHHHH
T ss_pred cc--c-cchH----HHHHHHHHHHHHhhccC--CcEEeccHHHHH
Confidence 00 0 0000 00114566777777753 678899887764
|
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|