Citrus Sinensis ID: 017027


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
MAKPAYKPQFLLLIGIFLCFFTGKSSQFGLETDEFWLNEEDSEVNMVQSRRDSSRHCDFTSGKWVYDPSYPLYDSNCPYLSTAVSCQKNGRPDSDYQKWKWKPHACSIPRFDALKYLAKMRRKRIMLVGDSIMRNQWESLVCLVQGVVPMGRKKVTYNGLSMAFHALDFETSIEFSWAPLLVELMKGPENKRILHLDLIEDNARYWRGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKCYKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTMSALRRDGHPSVYRRAMGQEERQHSKDFSSDCSHWCLPGVPDSWNEMLSALL
cccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccEEEEEccccccccccHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHcccccccEEEEEcccEEEEEEEccccEEEEEEccEEEHHccccccccccccccccHHHHccccccEEEEccccccccccccccccEEEccccccccccHHHHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccHHHccccccccccccccccccccHHHHHHHHHc
cccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccHHcEEEEcccccccccccHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHccccccEEEEcccEEEEEEEEccEEEEEEEccEEEEEccccccccEEEEcHHHHcHHHcccccEEEEEcEEEEEccccccccccccccccEcccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEHHHHHHHHHcccccHHccccccHHHccccccccccccccccccccHHHHHHHHcc
makpaykpQFLLLIGIFLCfftgkssqfgletdefwlneedsevnmvqsrrdssrhcdftsgkwvydpsyplydsncpylstavscqkngrpdsdyqkwkwkphacsiprFDALKYLAKMRRKRIMLVGDSIMRNQWESLVCLVQgvvpmgrkkvtYNGLSMAFHALDFETSIEFSWAPLLVELMkgpenkrilHLDLIEDNARYWRGADVLVFDSahwwthseqwsswdyymeGKSVYKVMNPMIAYEKGLTTWAKWIdlnidprrtRVIFrsmsprhnrengwkcykqrtplaffshqhVPEQLVVLKEVLRRmrfpvylqdittmsalrrdghpsvyrramgqeerqhskdfssdcshwclpgvpdswNEMLSALL
MAKPAYKPQFLLLIGIFLCFFTGKSSQFGLETDEFWLNEEDSEVNmvqsrrdssrhcdftsgkWVYDPSYPLYDSNCPYLSTAVSCQKNGRpdsdyqkwkwkphacsiprfDALKYLAKMRRKRIMLVGDSIMRNQWESLVCLVQGVVPMGRKKVTYNGLSMAFHALDFETSIEFSWAPLLVELMKGPENKRILHLDLIEDNARYWRGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIfrsmsprhnrengwKCYKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYlqdittmsalrrdghPSVYRRAMGQEERQHSKDFSSDCSHWCLPGVPDSWNEMLSALL
MAKPAYKPQfllligiflcffTGKSSQFGLETDEFWLNEEDSEVNMVQSRRDSSRHCDFTSGKWVYDPSYPLYDSNCPYLSTAVSCQKNGRPDSDYQKWKWKPHACSIPRFDALKYLAKMRRKRIMLVGDSIMRNQWESLVCLVQGVVPMGRKKVTYNGLSMAFHALDFETSIEFSWAPLLVELMKGPENKRILHLDLIEDNARYWRGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKCYKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTMSALRRDGHPSVYRRAMGQEERQHSKDFSSDCSHWCLPGVPDSWNEMLSALL
******KPQFLLLIGIFLCFFTGKSSQFGLETDEFWLN*****************HCDFTSGKWVYDPSYPLYDSNCPYLSTAVSCQKNGRPDSDYQKWKWKPHACSIPRFDALKYLAKMRRKRIMLVGDSIMRNQWESLVCLVQGVVPMGRKKVTYNGLSMAFHALDFETSIEFSWAPLLVELMKGPENKRILHLDLIEDNARYWRGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKCYKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTMSAL***************************CSHWCLPGVP***********
***PAYKPQFLLLIGIFLCFFTGKSS********************************FTSGKWVYDPSYPLYDSNCPYLSTAVSCQKNGRPDSDYQKWKWKPHACSIPRFDALKYLAKMRRKRIMLVGDSIMRNQWESLVCLVQGVVPMGRKKVTYNGLSMAFHALDFETSIEFSWAPLLVELMKGPENKRILHLDLIEDNARYWRGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKCYKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTMSALRRDGHPSVYRRA**********DFSSDCSHWCLPGVPDSWNEMLSALL
MAKPAYKPQFLLLIGIFLCFFTGKSSQFGLETDEFWLNEEDSE*************CDFTSGKWVYDPSYPLYDSNCPYLSTAVSCQKNGRPDSDYQKWKWKPHACSIPRFDALKYLAKMRRKRIMLVGDSIMRNQWESLVCLVQGVVPMGRKKVTYNGLSMAFHALDFETSIEFSWAPLLVELMKGPENKRILHLDLIEDNARYWRGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKCYKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTMSALRRDGHPSVYRRAM**************CSHWCLPGVPDSWNEMLSALL
****AYKPQFLLLIGIFLCFFTGKSS*****************************HCDFTSGKWVYDPSYPLYDSNCPYLSTAVSCQKNGRPDSDYQKWKWKPHACSIPRFDALKYLAKMRRKRIMLVGDSIMRNQWESLVCLVQGVVPMGRKKVTYNGLSMAFHALDFETSIEFSWAPLLVELMKGPENKRILHLDLIEDNARYWRGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKCYKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTMSALRRDGHPSVYRRAMG******SKDFSSDCSHWCLPGVPDSWNEMLSALL
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAKPAYKPQFLLLIGIFLCFFTGKSSQFGLETDEFWLNEEDSEVNMVQSRRDSSRHCDFTSGKWVYDPSYPLYDSNCPYLSTAVSCQKNGRPDSDYQKWKWKPHACSIPRFDALKYLAKMRRKRIMLVGDSIMRNQWESLVCLVQGVVPMGRKKVTYNGLSMAFHALDFETSIEFSWAPLLVELMKGPENKRILHLDLIEDNARYWRGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWKCYKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTMSALRRDGHPSVYRRAMGQEERQHSKDFSSDCSHWCLPGVPDSWNEMLSALL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query379
255560321379 conserved hypothetical protein [Ricinus 0.941 0.941 0.851 0.0
224100615384 predicted protein [Populus trichocarpa] 0.965 0.953 0.795 1e-176
449434498378 PREDICTED: uncharacterized protein LOC10 0.947 0.949 0.788 1e-174
147769861388 hypothetical protein VITISV_004134 [Viti 0.952 0.930 0.780 1e-172
225450256388 PREDICTED: uncharacterized protein LOC10 0.952 0.930 0.780 1e-172
356575494386 PREDICTED: uncharacterized protein LOC10 1.0 0.981 0.722 1e-165
255647393386 unknown [Glycine max] 1.0 0.981 0.720 1e-165
356534675382 PREDICTED: uncharacterized protein LOC10 0.973 0.965 0.729 1e-163
18410028379 protein trichome birefringence-like 36 [ 0.949 0.949 0.647 1e-140
297820162379 hypothetical protein ARALYDRAFT_485823 [ 0.955 0.955 0.639 1e-139
>gi|255560321|ref|XP_002521177.1| conserved hypothetical protein [Ricinus communis] gi|223539624|gb|EEF41208.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/357 (85%), Positives = 332/357 (92%)

Query: 23  GKSSQFGLETDEFWLNEEDSEVNMVQSRRDSSRHCDFTSGKWVYDPSYPLYDSNCPYLST 82
           GKSSQFGLE    WLNEEDSEV+MVQ+R DSS  CDFTSGKWVYD SYPLYDS+CPYLST
Sbjct: 23  GKSSQFGLEDGLSWLNEEDSEVDMVQTRHDSSSSCDFTSGKWVYDQSYPLYDSSCPYLST 82

Query: 83  AVSCQKNGRPDSDYQKWKWKPHACSIPRFDALKYLAKMRRKRIMLVGDSIMRNQWESLVC 142
           +V+C++NGRPDSDY+KW+WKPHACS+PRFDALK+L KMR+KRIMLVGDSIMRNQWESLVC
Sbjct: 83  SVTCKRNGRPDSDYEKWRWKPHACSVPRFDALKFLGKMRKKRIMLVGDSIMRNQWESLVC 142

Query: 143 LVQGVVPMGRKKVTYNGLSMAFHALDFETSIEFSWAPLLVELMKGPENKRILHLDLIEDN 202
           LVQGV+P G K V YNG SMAFHALDFETSIEF+WAPLLVEL K  ENKRILHLD+IE+N
Sbjct: 143 LVQGVIPTGHKMVHYNGPSMAFHALDFETSIEFTWAPLLVELKKEAENKRILHLDMIEEN 202

Query: 203 ARYWRGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLN 262
           ARYWR  D+LVFDSAHWWTHS++WSSWDYYMEG+S+ K MNPMIAY+KGLTTWAKWIDLN
Sbjct: 203 ARYWRNVDILVFDSAHWWTHSDKWSSWDYYMEGQSLIKSMNPMIAYQKGLTTWAKWIDLN 262

Query: 263 IDPRRTRVIFRSMSPRHNRENGWKCYKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYL 322
           +DPRRTRVIFRSMSPRHNR+NGWKCYKQRTPLAFFSHQH+PEQLVVLKEVLR+M FPVYL
Sbjct: 263 LDPRRTRVIFRSMSPRHNRDNGWKCYKQRTPLAFFSHQHIPEQLVVLKEVLRKMSFPVYL 322

Query: 323 QDITTMSALRRDGHPSVYRRAMGQEERQHSKDFSSDCSHWCLPGVPDSWNEMLSALL 379
           QDITTMSALRRDGHPSVYRRA+ QEERQH +DFSSDCSHWCLPGVPD WNEMLSALL
Sbjct: 323 QDITTMSALRRDGHPSVYRRAISQEERQHPRDFSSDCSHWCLPGVPDIWNEMLSALL 379




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100615|ref|XP_002311947.1| predicted protein [Populus trichocarpa] gi|222851767|gb|EEE89314.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449434498|ref|XP_004135033.1| PREDICTED: uncharacterized protein LOC101204429 [Cucumis sativus] gi|449512799|ref|XP_004164142.1| PREDICTED: uncharacterized protein LOC101230513 [Cucumis sativus] Back     alignment and taxonomy information
>gi|147769861|emb|CAN74465.1| hypothetical protein VITISV_004134 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225450256|ref|XP_002269148.1| PREDICTED: uncharacterized protein LOC100251081 [Vitis vinifera] gi|296080994|emb|CBI18592.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356575494|ref|XP_003555875.1| PREDICTED: uncharacterized protein LOC100803650 [Glycine max] Back     alignment and taxonomy information
>gi|255647393|gb|ACU24162.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356534675|ref|XP_003535878.1| PREDICTED: uncharacterized protein LOC100305461 [Glycine max] Back     alignment and taxonomy information
>gi|18410028|ref|NP_566996.1| protein trichome birefringence-like 36 [Arabidopsis thaliana] gi|15451108|gb|AAK96825.1| putative protein [Arabidopsis thaliana] gi|20148379|gb|AAM10080.1| putative protein [Arabidopsis thaliana] gi|332645684|gb|AEE79205.1| protein trichome birefringence-like 36 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297820162|ref|XP_002877964.1| hypothetical protein ARALYDRAFT_485823 [Arabidopsis lyrata subsp. lyrata] gi|297323802|gb|EFH54223.1| hypothetical protein ARALYDRAFT_485823 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query379
TAIR|locus:2080280379 TBL36 "AT3G54260" [Arabidopsis 0.907 0.907 0.667 2.5e-136
TAIR|locus:2178813402 PMR5 "AT5G58600" [Arabidopsis 0.844 0.796 0.420 5.9e-73
TAIR|locus:2041574367 TBL39 "AT2G42570" [Arabidopsis 0.878 0.907 0.398 1.6e-70
TAIR|locus:2055878364 AT2G31110 "AT2G31110" [Arabido 0.823 0.857 0.424 7e-70
TAIR|locus:2029959380 TBL38 "AT1G29050" [Arabidopsis 0.828 0.826 0.419 4.9e-69
TAIR|locus:2170184608 TBR [Arabidopsis thaliana (tax 0.875 0.546 0.396 6.3e-69
TAIR|locus:2055425385 TBL37 "AT2G34070" [Arabidopsis 0.833 0.820 0.409 8e-69
TAIR|locus:2096094475 TBL6 "AT3G62390" [Arabidopsis 0.828 0.661 0.394 5.6e-68
TAIR|locus:2088659556 TBL1 "AT3G12060" [Arabidopsis 0.860 0.586 0.394 8.2e-67
TAIR|locus:2045688398 TBL45 "AT2G30010" [Arabidopsis 0.846 0.806 0.405 1.1e-66
TAIR|locus:2080280 TBL36 "AT3G54260" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1335 (475.0 bits), Expect = 2.5e-136, P = 2.5e-136
 Identities = 235/352 (66%), Positives = 289/352 (82%)

Query:    33 DEFWLNEEDSEVNMVQSRRDS-SRHCDFTSGKWVYDPSYPLYDSNCPYLSTAVSCQKNGR 91
             DE WL  +D  +N +Q+RR+     CD++ GKW +D +YPLYDS+CPYLS+A+SCQ+NGR
Sbjct:    26 DELWLVGDDDPLNALQTRRERREERCDYSVGKWTFDETYPLYDSSCPYLSSALSCQRNGR 85

Query:    92 PDSDYQKWKWKPHACSIPRFDALKYLAKMRRKRIMLVGDSIMRNQWESLVCLVQGVVPMG 151
             PDS YQKW+W P ACS+PRFDALK+L KMR KRIMLVGDS+MRNQWESLVCLVQ V+P  
Sbjct:    86 PDSYYQKWRWIPKACSLPRFDALKFLGKMRGKRIMLVGDSMMRNQWESLVCLVQSVLPTH 145

Query:   152 RKKVTYNGLSMAFHALDFETSIEFSWAPLLVELMKGPENKRILHLDLIEDNARYWRGADV 211
             RKK+TYNG +M+FH+LDFETSIEF WAPLLVEL +G + KR+LHLD IEDNARYWRG DV
Sbjct:   146 RKKLTYNGPTMSFHSLDFETSIEFCWAPLLVELKRGVDRKRVLHLDSIEDNARYWRGVDV 205

Query:   212 LVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVI 271
             LVFDSAHWWTHS++WSSWDYYM+G  ++K M+PM+AYE+GLTTWAKW+++N+DP +T+VI
Sbjct:   206 LVFDSAHWWTHSQRWSSWDYYMDGNKIFKAMDPMVAYERGLTTWAKWVEINLDPSKTKVI 265

Query:   272 FRSMSPRHNRENGWKCYKQRTPLAFFSHQ---HVPEQLVVLKEVLRRMRFPVYLQDITTM 328
             FR++SPR   E+G  CY Q+ PL   S     HVP+Q  VL +VLR M++ VYL DITTM
Sbjct:   266 FRTVSPR---ESGQMCYNQKHPLPSLSSSTKPHVPQQSRVLNKVLRTMKYRVYLYDITTM 322

Query:   329 SALRRDGHPSVYRRAMGQEERQHS-KDFSSDCSHWCLPGVPDSWNEMLSALL 379
             SA RRDGHPSV++RAM +EE+ H     SSDCSHWCLPGVPD WNEMLS+++
Sbjct:   323 SAYRRDGHPSVFKRAMHEEEKHHRIAGPSSDCSHWCLPGVPDIWNEMLSSII 374




GO:0008150 "biological_process" evidence=ND
GO:0010089 "xylem development" evidence=RCA
GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA
TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00080178
SubName- Full=Putative uncharacterized protein; (385 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query379
PLN02629387 PLN02629, PLN02629, powdery mildew resistance 5 1e-108
pfam13839270 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera 4e-98
pfam1441655 pfam14416, PMR5N, PMR5 N terminal Domain 1e-24
>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 Back     alignment and domain information
 Score =  321 bits (824), Expect = e-108
 Identities = 151/354 (42%), Positives = 214/354 (60%), Gaps = 17/354 (4%)

Query: 38  NEEDSEVNMVQSRRDSSRHCDFTSGKWVYDPSYPLYD-SNCPYLSTA-VSCQKNGRPDSD 95
           N   +    +Q+ + +   C    G WV D SYPLY  S+CP +     +CQ  GRPDSD
Sbjct: 37  NHHSNRRPSLQANQST---CALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSD 93

Query: 96  YQKWKWKPHACSIPRFDALKYLAKMRRKRIMLVGDSIMRNQWESLVCLVQGVVPMGRKKV 155
           Y K++W+P  C +PRF+ L++L KM+ K +M VGDS+ RNQWESL+CL+   VP  R ++
Sbjct: 94  YLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQM 153

Query: 156 TYNGLSMAFHALDFETSIEFSWAPLLVELMKGPENKRILHLDLIEDNARYWRGADVLVFD 215
           +       F  LD+  SI F  AP LV++    + KR+L L+ I  NA  WR ADVL+F+
Sbjct: 154 SRGDPLSTFKFLDYGVSISFYKAPYLVDI-DAVQGKRVLKLEEISGNANAWRDADVLIFN 212

Query: 216 SAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSM 275
           + HWW+H      WDY   G + Y+ M+ ++A EK L TWA W+D N+D  RTRV F+S+
Sbjct: 213 TGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSI 272

Query: 276 SPRHNRENGW---------KCYKQRTPLAFFSHQHV-PEQLVVLKEVLRRMRFPVYLQDI 325
           SP H   + W          CY + TP++  ++    P+Q+ V+ EV+R M  P YL DI
Sbjct: 273 SPTHYNPSEWSAGASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDI 332

Query: 326 TTMSALRRDGHPSVYRRAMGQEERQHSKDFSSDCSHWCLPGVPDSWNEMLSALL 379
           T +S LR+DGHPS+Y   +   +R +  D S+DCSHWCLPG+PD+WN++    L
Sbjct: 333 TLLSELRKDGHPSIYSGDLSPSQRANP-DRSADCSHWCLPGLPDTWNQLFYTAL 385


Length = 387

>gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 379
PLN02629387 powdery mildew resistance 5 100.0
PF13839263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 100.0
PF1441655 PMR5N: PMR5 N terminal Domain 99.93
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 98.58
cd01841174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 96.71
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 96.14
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 95.79
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 95.51
COG2845354 Uncharacterized protein conserved in bacteria [Fun 92.79
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 88.2
cd04502171 SGNH_hydrolase_like_7 Members of the SGNH-hydrolas 87.55
cd01831169 Endoglucanase_E_like Endoglucanase E-like members 86.56
cd01836191 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee 81.59
>PLN02629 powdery mildew resistance 5 Back     alignment and domain information
Probab=100.00  E-value=2.2e-112  Score=839.58  Aligned_cols=327  Identities=45%  Similarity=0.919  Sum_probs=300.5

Q ss_pred             CCCCCCCcCccCceeeCCCCCCCCCC-CC-CCCcCcccccCCCCCcccccceeecCCCCCCCCCHHHHHHHHcCCeEEEE
Q 017027           51 RDSSRHCDFTSGKWVYDPSYPLYDSN-CP-YLSTAVSCQKNGRPDSDYQKWKWKPHACSIPRFDALKYLAKMRRKRIMLV  128 (379)
Q Consensus        51 ~~~~~~Cd~~~G~WV~d~~~PlY~~~-Cp-~i~~~~~C~~nGRpd~~y~~wrWqP~~C~lprfd~~~fl~~lrgK~i~FV  128 (379)
                      .++.+.||+|+|+||+|+++|+|+++ || ||++++||++|||||++|++|||||++|+||||||.+||++||||+|+||
T Consensus        47 ~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FV  126 (387)
T PLN02629         47 QANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFV  126 (387)
T ss_pred             CCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEe
Confidence            46678999999999999999999998 99 99999999999999999999999999999999999999999999999999


Q ss_pred             ecchhHHHHHHHHHhhcccCCCcceEEeecCCeeEEEEecCceEEEEEEccccccccCCCCCceeEEecccchhhcccCC
Q 017027          129 GDSIMRNQWESLVCLVQGVVPMGRKKVTYNGLSMAFHALDFETSIEFSWAPLLVELMKGPENKRILHLDLIEDNARYWRG  208 (379)
Q Consensus       129 GDSl~Rn~~~SL~clL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv~~~~~~~~~~~l~lD~~d~~~~~w~~  208 (379)
                      ||||+|||||||+|||++++|...+.+...++..+|+|++||+||+||||||||+.+..+ ..+.++||++|..++.|++
T Consensus       127 GDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~-~~~~l~LD~id~~a~~w~~  205 (387)
T PLN02629        127 GDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQ-GKRVLKLEEISGNANAWRD  205 (387)
T ss_pred             ccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCC-CceeEEecCcchhhhhhcc
Confidence            999999999999999999998766666667788999999999999999999999987653 4578999999988889999


Q ss_pred             ccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCc---
Q 017027          209 ADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGW---  285 (379)
Q Consensus       209 ~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W---  285 (379)
                      +|||||||||||.+.+....+++++.|+.++++|++.+||++||+||++||++++++.+|+|||||+||+||+||+|   
T Consensus       206 ~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~g  285 (387)
T PLN02629        206 ADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAG  285 (387)
T ss_pred             CCEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCC
Confidence            99999999999999887777889999999899999999999999999999999999999999999999999999999   


Q ss_pred             ------ccccCCccCcccCCCCch-HHHHHHHHHHHhcCCceEEeecccccccccCCCCCcccccCchhhhcCCCCCCCC
Q 017027          286 ------KCYKQRTPLAFFSHQHVP-EQLVVLKEVLRRMRFPVYLQDITTMSALRRDGHPSVYRRAMGQEERQHSKDFSSD  358 (379)
Q Consensus       286 ------~C~~~t~P~~~~~~~~~~-~~~~~~~~~~~~~~~~v~lLDit~ms~~R~D~HP~~y~~~~~~~~~~~~~~~~~D  358 (379)
                            +|+++|+|+.++++.+.. .+++++++++++++.+|+|||||+||++|||||||+|+++ .++++++++..++|
T Consensus       286 g~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~-~~~~~~~~p~~~~D  364 (387)
T PLN02629        286 ASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGD-LSPSQRANPDRSAD  364 (387)
T ss_pred             CCCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCC-CchhhccCCCCCCC
Confidence                  299999999987776544 5667999999999999999999999999999999999863 34555566677899


Q ss_pred             cccccCCCcchHHHHHHHhhC
Q 017027          359 CSHWCLPGVPDSWNEMLSALL  379 (379)
Q Consensus       359 C~HWClPG~~D~WN~lL~~~L  379 (379)
                      |+||||||||||||||||++|
T Consensus       365 C~HWCLPGvpDTWNelL~a~L  385 (387)
T PLN02629        365 CSHWCLPGLPDTWNQLFYTAL  385 (387)
T ss_pred             cccccCCCCCccHHHHHHHHH
Confidence            999999999999999999986



>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>PF14416 PMR5N: PMR5 N terminal Domain Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans Back     alignment and domain information
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query379
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-09
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 57.9 bits (139), Expect = 3e-09
 Identities = 60/391 (15%), Positives = 119/391 (30%), Gaps = 115/391 (29%)

Query: 35  FWLNEEDSEVNMVQSRRDSSRHCDFTSGKWVYDPSYPLYDSNCPYLSTAVSCQKNGRPDS 94
           FW      E  MVQ   +     ++   K++  P     +   P + T +  ++  R  +
Sbjct: 68  FWTLLSKQE-EMVQKFVEEVLRINY---KFLMSPIK--TEQRQPSMMTRMYIEQRDRLYN 121

Query: 95  DYQKWKWKPHACSIPRFDALK-YLAKMRRKRIMLV------GDSIMRNQWESLVCLVQGV 147
           D Q +  K +   +  +  L+  L ++R  + +L+      G + +       VCL   V
Sbjct: 122 DNQVFA-KYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALD----VCLSYKV 176

Query: 148 VP----------MGRK---------------KVTYNGLSMAFHALDFETSIEFSWAPLLV 182
                       +                  ++  N  S + H+ + +  I  S    L 
Sbjct: 177 QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH-SIQAELR 235

Query: 183 ELMKGPENKRILHLDLIEDN---ARYWRGAD----VLVFDSAHWWTHSEQWSSWDYYMEG 235
            L+K    +  L   L+  N   A+ W   +    +L+       T +      D+    
Sbjct: 236 RLLKSKPYENCL---LVLLNVQNAKAWNAFNLSCKILL-------T-TRFKQVTDFLSAA 284

Query: 236 KSVYKVMNPMIAYEKGLTT------WAKWID----------LNIDPRRTRVIFRSMSPRH 279
            + +  ++        LT         K++D          L  +PRR  +I  S+    
Sbjct: 285 TTTHISLDHH---SMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGL 341

Query: 280 NRENGWK-------------CYKQRTP---------LAFF-SHQHVPEQ-LVVL-----K 310
              + WK                   P         L+ F    H+P   L ++     K
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIK 401

Query: 311 EVLRRMRFPVYLQDITTMSALRRDGHPSVYR 341
             +  +     +  +   S + +    S   
Sbjct: 402 SDVMVV-----VNKLHKYSLVEKQPKESTIS 427


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query379
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 97.75
4hf7_A209 Putative acylhydrolase; PF13472 family, structural 96.27
1yzf_A195 Lipase/acylhydrolase; structural GENO PSI, protein 81.23
3dci_A232 Arylesterase; SGNH_hydrolase SUBF structural genom 80.48
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
Probab=97.75  E-value=0.00015  Score=63.84  Aligned_cols=91  Identities=14%  Similarity=0.181  Sum_probs=57.1

Q ss_pred             CCccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCcc
Q 017027          207 RGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGWK  286 (379)
Q Consensus       207 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W~  286 (379)
                      ..+|+|||+.|..=..                    ...+.|+..|+++++.+.+.  .++++|++-+..|.....  + 
T Consensus        73 ~~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~~~--~-  127 (200)
T 4h08_A           73 TKFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRTGE--G-  127 (200)
T ss_dssp             SCCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEESG--G-
T ss_pred             CCCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCcccc--c-
Confidence            3589999999976211                    12457888999998888764  467889999988843211  0 


Q ss_pred             cccCCccCcccCCCC-chHHHHHHHHHHHhcCCceEEeecccccc
Q 017027          287 CYKQRTPLAFFSHQH-VPEQLVVLKEVLRRMRFPVYLQDITTMSA  330 (379)
Q Consensus       287 C~~~t~P~~~~~~~~-~~~~~~~~~~~~~~~~~~v~lLDit~ms~  330 (379)
                           .. ....... ..+++++++++.++  .++.++|++..+.
T Consensus       128 -----~~-~~~~~~~~~~~~n~~~~~~a~~--~~v~~iD~~~~~~  164 (200)
T 4h08_A          128 -----MK-EFAPITERLNVRNQIALKHINR--ASIEVNDLWKVVI  164 (200)
T ss_dssp             -----GC-EECTHHHHHHHHHHHHHHHHHH--TTCEEECHHHHHT
T ss_pred             -----cc-ccchhHHHHHHHHHHHHHHhhh--cceEEEecHHhHh
Confidence                 00 0000000 01467778887775  3688999877654



>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 Back     alignment and structure
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query379
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 97.35
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 97.16
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 82.57
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]
Probab=97.35  E-value=0.00028  Score=60.31  Aligned_cols=93  Identities=9%  Similarity=0.078  Sum_probs=49.9

Q ss_pred             cCCccEEEEeccccccccccCCccceeecCceeccccChHHHHHHHHHHHHHHHHhhCCCCCcEEEEeecCCCCCCCCCc
Q 017027          206 WRGADVLVFDSAHWWTHSEQWSSWDYYMEGKSVYKVMNPMIAYEKGLTTWAKWIDLNIDPRRTRVIFRSMSPRHNRENGW  285 (379)
Q Consensus       206 w~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~al~t~~~~i~~~~~~~~t~VffRt~sP~Hf~~g~W  285 (379)
                      .+..|+|||..|.-=...          .+      -...+.|+..++++++.+.+    .+..+++-+..| +....  
T Consensus        69 ~~~~D~vvi~~G~ND~~~----------~~------~~~~~~~~~~l~~li~~~~~----~~~~~vl~~~~~-~~~~~--  125 (208)
T d2o14a2          69 IKPGDYFMLQLGINDTNP----------KH------KESEAEFKEVMRDMIRQVKA----KGADVILSTPQG-RATDF--  125 (208)
T ss_dssp             CCTTCEEEEECCTGGGCG----------GG------CCCHHHHHHHHHHHHHHHHT----TTCEEEEECCCC-CTTCB--
T ss_pred             cCCCCEEEEEcCCCcccc----------cc------cccHHHHHHHHHHHHHHHHh----cCCceeeccccc-ccccc--
Confidence            345799999988652110          00      12356788888888887754    233455544433 11100  


Q ss_pred             ccccCCccCcccCCCCchHHHHHHHHHHHhcCCceEEeecccccc
Q 017027          286 KCYKQRTPLAFFSHQHVPEQLVVLKEVLRRMRFPVYLQDITTMSA  330 (379)
Q Consensus       286 ~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLDit~ms~  330 (379)
                      ..  . .+..    ....+.+++++++.++.  .+.++|++.++.
T Consensus       126 ~~--~-~~~~----~~~~~~~~~~~~~a~~~--~v~~vD~~~~~~  161 (208)
T d2o14a2         126 TS--E-GIHS----SVNRWYRASILALAEEE--KTYLIDLNVLSS  161 (208)
T ss_dssp             CT--T-SCBC----CTTSTTHHHHHHHHHHT--TCEEECHHHHHH
T ss_pred             cc--c-cchH----HHHHHHHHHHHHhhccC--CcEEeccHHHHH
Confidence            00  0 0000    00114566777777753  678899887764



>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure