Citrus Sinensis ID: 017033

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
Protein Sequence
MSKSIAANPSGEDSKAPLINQRTVIITLFVVAAVSCLFLYHTANPFEFLPRSSAYDVIAPSMKAQKSSNDPSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANCCFGLEAKITDLRLALEDWRNFMELPPDQKSLPRSWTVPKKCRETPFHPPDESPNSLPPAAPKISAQEGNNQ
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHcccccEEEEEEccccccccccHHHHHHHHHHHHccccccccEEEEEEEcHHHHHHHHHccccEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHcccEEEEEcccEEEEccccccccccccEEEEEcccccccccccccccEEEEEEEccHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccccEEEEEccccccccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHcccccccccccccccccHHHHHHHHHHccccEEEEEEEcHHHcccccHHHHHHHHHHcccccHHHccEEEEEEEcHHHHHHHHHccccEEEEccccccccccHcccccHHHHHHHHHHHHHHHHHHHccccEEEEccEEEEEccccccccccccEEEEEcccccccccccccccccEEEEEccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccHHHHccEEEEEEcccHccccccccccHHHEEEEEcHHcHcHHHHHHHHHHHHHHHHHHHcccHHHccccccccccccccccccccccccccccccccccEEEEccccc
Coil and Loop (DISEMBL)
msksiaanpsgedskaplinqRTVIITLFVVAAVSCLFLyhtanpfeflprssaydviapsmkaqkssndpSLEKILKRAAMGDNTVIITTLNqawaepnsIFDIFLESfrtgngtgkLLDHLVVVALDSkaldhclsthphcyalntsgldfsgkeaYFMTSSYLEMMWIRIRLLSDVLAMgynfvftdadivwlqnpfqrfdpdadfqiacdrfsgnsfnlrnepnggfnyvksnnrTIEFYKFWYnsrkmfpglhdqdvlneikfdpyiQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHanccfgleAKITDLRLALEDWRnfmelppdqkslprswtvpkkcretpfhppdespnslppaapkisaqegnnq
Flexible Loop (DISEMBL)
msksiaanpsgedskapliNQRTVIITLFVVAAVSCLFLYHTANPFEFLPRSSAYDVIAPsmkaqkssndpSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGnsfnlrnepnggfnyvksnNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANCCFGLEAKITDLRLALEDWRNFMelppdqkslprswTVPKKCRETPFhppdespnslppaapkisaqegnnq
Low Complexity Region (SEG)
MSKSIAANPSGEDSKAPLINQRTVIITLFVVAAVSCLFLYHTANPFEFLPRSSAYDVIAPSMKAQKSSNDPSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANCCFGLEAKITDLRLALEDWRNFMELPPDQKSLPRSWTVPKKCRETPFHPPDESPNSLPPAAPKISAQEGNNQ
Disordered region (IsUnstruct)
*****************LINQRTVIITLFVVAAVSCLFLYHTANPFEFLPRSSAYDVI*****************ILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANCCFGLEAKITDLRLALEDWRNFME************************************************
Disordered Region (DISOPRED)
*********************RTVIITLFVVAAVSCLFLYHTANPFEFLP***********************EKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSG***YFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANCCFGLEAKITDLRLALEDWRNFMELPPDQKSLPRSWTVPKKCR*****************************
Disordered Region (DISEMBL)
*************SKAPLINQRTVIITLFVVAAVSCLFLYHTANPFEFLPRSSAYDVIAPS**********SLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANCCFGLEAKITDLRLALEDWRNFMELPPDQKSLPRSWTVPKKCRET************PPAAPK*********
Disordered Region (DISPRO)
****************PLINQRTVIITLFVVAAVSCLFLYHTANPF**********************NDPSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANCCFGLEAKITDLRLALEDWRNFMELPP******RSWT***********************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSKSIAANPSGEDSKAPLINQRTVIITLFVVAAVSCLFLYHTANPFEFLPRSSAYDVIAPSMKAQKSSNDPSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANCCFGLEAKITDLRLALEDWRNFMELPPDQKSLPRSWTVPKKCRETPFHPPDESPNSLPPAAPKISAQEGNNQ
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	378	2.2.26 [Sep-21-2011]
P0C042	367	Uncharacterized protein A	no	no	0.708	0.730	0.521	3e-79
Q3E6Y3	329	Uncharacterized protein A	no	no	0.701	0.805	0.409	7e-54

>sp|P0C042|Y4597_ARATH Uncharacterized protein At4g15970 OS=Arabidopsis thaliana GN=At4g15970 PE=2 SV=1

 Score =  295 bits (756), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 145/278 (52%), Positives = 179/278 (64%), Gaps = 10/278 (3%)

Query: 72  SLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSK 131
            L KIL  AA  D TVIITTLN+AW+EPNS FD+FL SF  G GT  LL HLVV  LD +
Sbjct: 41  KLGKILTEAATEDKTVIITTLNKAWSEPNSTFDLFLHSFHVGKGTKPLLRHLVVACLDEE 100

Query: 132 ALDHCLSTHPH-CYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTD 190
           A   C   HPH CY + T G+DF+G +  FMT  YL+MMW RI  L  +L + YNF+FT 
Sbjct: 101 AYSRCSEVHPHRCYFMKTPGIDFAG-DKMFMTPDYLKMMWRRIEFLGTLLKLRYNFIFTI 159

Query: 191 ADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNS 250
                   PF R   + DFQIACDR+SG+  ++ N  NGGF +VK+N RTI+FY +WY S
Sbjct: 160 --------PFPRLSKEVDFQIACDRYSGDDKDIHNAVNGGFAFVKANQRTIDFYNYWYMS 211

Query: 251 RKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANCCFG 310
           R  +P  HDQDVL++IK   Y  KI +K+RFLDTKY  GFC+ S+D + VCTMHANCC G
Sbjct: 212 RLRYPDRHDQDVLDQIKGGGYPAKIGLKMRFLDTKYFGGFCEPSRDLDKVCTMHANCCVG 271

Query: 311 LEAKITDLRLALEDWRNFMELPPDQKSLPRSWTVPKKC 348
           LE KI DLR  + DW N++           +W  P+ C
Sbjct: 272 LENKIKDLRQVIVDWENYVSAAKTTDGQIMTWRDPENC 309

Arabidopsis thaliana (taxid: 3702)

>sp|Q3E6Y3|Y1869_ARATH Uncharacterized protein At1g28695 OS=Arabidopsis thaliana GN=At1g28695 PE=2 SV=1

 Score =  211 bits (537), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 115/281 (40%), Positives = 161/281 (57%), Gaps = 16/281 (5%)

Query: 73  LEKILKRAAMGDN-TVIITTLNQAWAEP----NSIFDIFLESFRTGNGTGKLLDHLVVVA 127
           LE  L  AA G+N TVIIT +N+A+ +     +++ D+FLESF  G GT  LLDHL+VVA
Sbjct: 45  LEAALYTAAAGNNKTVIITMVNKAYVKEVGRGSTMLDLFLESFWEGEGTLPLLDHLMVVA 104

Query: 128 LDSKALDHCLSTHPHCYALNTS-GLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNF 186
           +D  A D C     HCY + T  G+D  G E  FM+  ++EMMW R RL+ DVL  GYN 
Sbjct: 105 VDQTAYDRCRFKRLHCYKMETEDGVDLEG-EKVFMSKDFIEMMWRRTRLILDVLRRGYNV 163

Query: 187 VFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKF 246
           +FTD D++WL++P  R +   D QI+ DR +          N GF +V+SNN+TI  ++ 
Sbjct: 164 IFTDTDVMWLRSPLSRLNMSLDMQISVDRINVGG----QLINTGFYHVRSNNKTISLFQK 219

Query: 247 WYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHAN 306
           WY+ R    G+ +QDVL  +    +  ++ + + FL T   +GFCQ S     V T+HAN
Sbjct: 220 WYDMRLNSTGMKEQDVLKNLLDSGFFNQLGLNVGFLSTTEFSGFCQDSPHMGVVTTVHAN 279

Query: 307 CCFGLEAKITDLRLALEDWRNFMELPPDQKSLP-----RSW 342
           CC  + AK+ DL   L DW+ +     + K  P     RSW
Sbjct: 280 CCLHIPAKVFDLTRVLRDWKRYKASHVNSKWSPHLKCSRSW 320

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	378
224111368	404	predicted protein [Populus trichocarpa]	0.851	0.797	0.586	1e-112
359491833	346	PREDICTED: uncharacterized protein At4g1	0.849	0.927	0.583	1e-111
359491817	373	PREDICTED: uncharacterized protein At4g1	0.880	0.892	0.550	1e-108
224125690	357	predicted protein [Populus trichocarpa]	0.886	0.938	0.556	1e-107
255561745	394	pentatricopeptide repeat-containing prot	0.851	0.817	0.573	1e-106
224099643	277	predicted protein [Populus trichocarpa]	0.727	0.992	0.646	1e-106
224120464	329	predicted protein [Populus trichocarpa]	0.854	0.981	0.573	1e-106
356529763	349	PREDICTED: uncharacterized protein At4g1	0.902	0.977	0.540	1e-105
356560053	379	PREDICTED: uncharacterized protein At4g1	0.883	0.881	0.553	1e-105
359473691	415	PREDICTED: uncharacterized protein At4g1	0.780	0.710	0.579	1e-103

>gi|224111368|ref|XP_002315829.1| predicted protein [Populus trichocarpa] gi|222864869|gb|EEF02000.1| predicted protein [Populus trichocarpa]

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 197/336 (58%), Positives = 243/336 (72%), Gaps = 14/336 (4%)

Query: 26  ITLFVVAAVSCLFLYHTANPFEFLPRSSAYDV-IAPSMKAQKSSN-----------DPSL 73
           + +FV  +VS L LY  A+   F   SS Y   I PS++   +S+           D  L
Sbjct: 49  VLVFVAISVSVLLLYGAADSLRFQSSSSGYSFNIFPSLRNSNNSDSKLSINDDGDDDYKL 108

Query: 74  EKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKAL 133
           EK+LK AAM D TVII TLN+AWA PN+I D+FLESFR G GT +LL+HLV+VALD KA 
Sbjct: 109 EKVLKEAAMEDKTVIIATLNEAWAAPNTIIDLFLESFRIGQGTRRLLNHLVIVALDRKAY 168

Query: 134 DHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADI 193
             C+  H HC+AL T GLDF   EAYFMT +YLEMMW RI  L  VL MGYNFVFTDADI
Sbjct: 169 KRCMEFHAHCFALVTQGLDFH-DEAYFMTPAYLEMMWRRIDFLRAVLQMGYNFVFTDADI 227

Query: 194 VWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKM 253
           +W ++PF RF  DADFQIACD F GNS +++N PNGGFNYVKSNNRTIEFYKFWY+SR+ 
Sbjct: 228 MWFRDPFPRFYLDADFQIACDHFLGNSSDIQNRPNGGFNYVKSNNRTIEFYKFWYSSRET 287

Query: 254 FPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANCCFGLEA 313
           +PG HDQDVLN IKFDP+I+ + +K+RFLDT +  G C+ S+D N VCTMHANCC+GL++
Sbjct: 288 YPGYHDQDVLNFIKFDPFIEDLGLKMRFLDTAFFGGLCEPSKDLNLVCTMHANCCYGLDS 347

Query: 314 KITDLRLALEDWRNFMELPPD-QKSLPRSWTVPKKC 348
           K+ DLR+ L+DW+ F+ LPP  ++S    WTVP+ C
Sbjct: 348 KLHDLRIMLQDWKTFLSLPPALKRSSSMLWTVPQNC 383

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491833|ref|XP_002270793.2| PREDICTED: uncharacterized protein At4g15970-like [Vitis vinifera]

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 196/336 (58%), Positives = 235/336 (69%), Gaps = 15/336 (4%)

Query: 21  QRTVIITLFVVA--AVSCLFLYHTANPFEFLPRSSAYDVIAPSMKAQKSSNDPSLEKILK 78
           +R V IT+F  A   V C F Y++A  F+FLP S+            K      L+KILK
Sbjct: 19  RRIVKITVFTAAFVVVPCFFFYNSAFSFQFLPISA------------KGKEGYKLDKILK 66

Query: 79  RAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLS 138
            AAMGD TVI+TT+N+AWA  NS+ D+FLESFR GN T +LL+HLV++ LD KA   C +
Sbjct: 67  NAAMGDKTVILTTVNEAWAANNSLLDLFLESFRIGNNTQRLLNHLVIITLDPKAYARCTT 126

Query: 139 THPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQN 198
            HPHCYAL T  +DFS KEA+FM+  YLEMMW RI  L  VL M YNF+FTDADI+W ++
Sbjct: 127 LHPHCYALKTKEMDFS-KEAFFMSHDYLEMMWRRIDFLRSVLKMRYNFIFTDADIMWFRD 185

Query: 199 PFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLH 258
           PFQRFD  ADFQIACD F+GNS ++ N PNGGF YVKSN+RTI+FYKFWY+SR  +PG H
Sbjct: 186 PFQRFDSKADFQIACDYFNGNSSDVNNSPNGGFTYVKSNDRTIKFYKFWYSSRVNYPGNH 245

Query: 259 DQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANCCFGLEAKITDL 318
           DQDVLN+IK DP+I KI +K+RFLDT Y  GFCQ S+D N VCTMHANCC GL  KI DL
Sbjct: 246 DQDVLNKIKHDPFITKIGLKMRFLDTAYFGGFCQRSKDLNLVCTMHANCCVGLGNKIHDL 305

Query: 319 RLALEDWRNFMELPPDQKSLPRSWTVPKKCRETPFH 354
            + L DWR F    P+  S   SWTVP+ C    FH
Sbjct: 306 GIMLHDWRKFTSFTPNTNSTSSSWTVPQNCSLKSFH 341

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491817|ref|XP_002270758.2| PREDICTED: uncharacterized protein At4g15970-like [Vitis vinifera]

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 185/336 (55%), Positives = 241/336 (71%), Gaps = 3/336 (0%)

Query: 25  IITLFVVAAVSCLFLYHTANPFEFLPRSSAYDVIAPSMKAQKSSNDPSLEKILKRAAMGD 84
           I  L+ +A +  LF+     P   L +S+      P++ ++    +  L+ +L++AAMGD
Sbjct: 34  IRRLYRIAKI-MLFMAVVVLPGMVLHKSAYSSQFLPALISRSELKESPLDIVLEKAAMGD 92

Query: 85  NTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHPHCY 144
            TVI+TT+N AWA  NS+ D+FLESF  GN T +LL+HLV++ALD K+   CL+ HP CY
Sbjct: 93  KTVILTTVNGAWAANNSLLDLFLESFHIGNNTKRLLNHLVIIALDQKSYARCLALHPLCY 152

Query: 145 ALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFD 204
           AL T G+DFSG EAY+ T +YLEMMW RI  L  +L MGY+F+FTDADI+W ++PFQ F 
Sbjct: 153 ALKTEGVDFSG-EAYYSTPNYLEMMWRRIDFLRSILTMGYSFIFTDADIMWFRDPFQHFF 211

Query: 205 PDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQDVLN 264
            DADFQI CD + GN +++ N PNGGF YVKSNNRTIEFYKFWY SR  +PG HDQDVLN
Sbjct: 212 QDADFQITCDSYIGNPYDVNNRPNGGFTYVKSNNRTIEFYKFWYASRVNYPGNHDQDVLN 271

Query: 265 EIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANCCFGLEAKITDLRLALED 324
            IK+DPYI +I +KIRFLDT Y  GFC+ S+DFN VCTMHANCCFG+++K+ DLR+ LED
Sbjct: 272 RIKYDPYISQIGLKIRFLDTTYFGGFCEPSKDFNLVCTMHANCCFGIDSKVHDLRVMLED 331

Query: 325 WRNFMELPPDQKSLPR-SWTVPKKCRETPFHPPDES 359
           WR ++  P  +K+L   SW VP+ C    FHPP+ +
Sbjct: 332 WRIYISSPQSKKALSTPSWRVPQNCSLASFHPPERN 367

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125690|ref|XP_002329694.1| predicted protein [Populus trichocarpa] gi|222870602|gb|EEF07733.1| predicted protein [Populus trichocarpa]

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/343 (55%), Positives = 245/343 (71%), Gaps = 8/343 (2%)

Query: 14  SKAPLINQRTVIITLFV--VAAVSCLFLYHTANPFEFLPRSSAYDVIAPSM----KAQKS 67
           S + LI++  V IT+    V AVSCL LY +ANPFEF P S              +  K 
Sbjct: 15  SSSGLIHKPVVRITVLFLGVLAVSCLVLYKSANPFEFPPSSLGSSDSDSLSVLYHQTYKR 74

Query: 68  SNDPSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVA 127
             D  L ++L +A+M  NTVI+TTLN AWAEP SIFD+FLESF+ G  T +LL++LV+++
Sbjct: 75  KVDLELGRVLNKASMKGNTVILTTLNDAWAEPGSIFDLFLESFQIGEKTKELLNNLVIIS 134

Query: 128 LDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFV 187
           LD KA   CL+ HPHCYAL T GL+F+ +EA FM+  YL+MMW RI  L+ VL MGY+FV
Sbjct: 135 LDQKAHARCLAIHPHCYALKTEGLNFT-REASFMSEDYLKMMWRRIEFLNTVLEMGYSFV 193

Query: 188 FTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFW 247
           FTDADI+WL+NPF RF P  DFQIACD++ GN  +  N PNGGF YV+SN RTI FY+FW
Sbjct: 194 FTDADIMWLRNPFPRFYPRVDFQIACDKYYGNPKDKSNRPNGGFTYVRSNLRTILFYRFW 253

Query: 248 YNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANC 307
           + SRK +PG HDQDVLN+IK D  ++KI++ +RFLDT Y  GFC+ S+DFN VCTMHANC
Sbjct: 254 FMSRKTYPGNHDQDVLNKIKNDRVLEKIELTMRFLDTAYFGGFCERSKDFNKVCTMHANC 313

Query: 308 CFGLEAKITDLRLALEDWRNFMELPPDQK-SLPRSWTVPKKCR 349
           C+GLE K+ DL++ LEDW+N+  LPP+++ S   SW  P+ CR
Sbjct: 314 CYGLETKVHDLKIVLEDWKNYTSLPPNERASASPSWRAPQNCR 356

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255561745|ref|XP_002521882.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223538920|gb|EEF40518.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis]

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/328 (57%), Positives = 240/328 (73%), Gaps = 6/328 (1%)

Query: 26  ITLFVVAAVSCLFLYHTANPFEFLPRSSA-YDVIAPSMKAQKS---SNDPSLEKILKRAA 81
           + +F   ++ CL LY  ++   FL   SA    I PS     S   SN+  LEK+LK AA
Sbjct: 49  VLVFGFMSLCCLLLYGASDSPRFLSFPSASLPYIFPSAVDTDSLPVSNEQKLEKVLKEAA 108

Query: 82  MGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHP 141
           M D TVI+TTLN+AWA PNS+ D+FL SFR G  T KLL+HLV++ALD KA   C+  H 
Sbjct: 109 MKDKTVILTTLNEAWAAPNSVIDLFLASFRLGEHTRKLLNHLVIIALDQKANARCIQVHD 168

Query: 142 HCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQ 201
           HC+AL T G+DFS  EAYFMT +YL+MMW RI  L  VL MGYNFVFTDADI+W ++PF 
Sbjct: 169 HCFALLTDGIDFSN-EAYFMTPAYLKMMWRRIDFLRSVLEMGYNFVFTDADIMWFRDPFP 227

Query: 202 RFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQD 261
           RF  DADFQIACD F+G+S N+ N+PNGGFNYV+SNNR+IEFYKFWY+SR+ +PG+HDQD
Sbjct: 228 RFYSDADFQIACDHFTGSSINIHNKPNGGFNYVRSNNRSIEFYKFWYSSRETYPGIHDQD 287

Query: 262 VLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANCCFGLEAKITDLRLA 321
           VLN+IK   +I+ + +K+RFLDT +  G C+ S+D N VCTMHANCC+GLE+K+ DLR+ 
Sbjct: 288 VLNKIKNASFIEDLGLKMRFLDTAFFGGLCEPSKDLNLVCTMHANCCYGLESKLHDLRIM 347

Query: 322 LEDWRNFMELPPD-QKSLPRSWTVPKKC 348
           L+DW+ F+ LPP  ++S   SW VP+ C
Sbjct: 348 LQDWKRFLSLPPSLKRSSVVSWRVPQNC 375

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099643|ref|XP_002311563.1| predicted protein [Populus trichocarpa] gi|222851383|gb|EEE88930.1| predicted protein [Populus trichocarpa]

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 179/277 (64%), Positives = 217/277 (78%), Gaps = 2/277 (0%)

Query: 73  LEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKA 132
           LEK+LK AAM D TVII TLN+AWA PN++ D+FLESFR G GT +LLDHLV+VALD KA
Sbjct: 2   LEKVLKEAAMEDKTVIIATLNEAWAAPNTVIDLFLESFRIGQGTRRLLDHLVIVALDEKA 61

Query: 133 LDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDAD 192
              C+  H HC+AL T GLDF   EAYFMT  YLEMMW RI  L  +L MGYNFVFTDAD
Sbjct: 62  YRRCMELHTHCFALVTQGLDFH-DEAYFMTHVYLEMMWRRIDFLRSLLEMGYNFVFTDAD 120

Query: 193 IVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRK 252
           I+W ++PF RF  DADFQIACD FSGNS +++N PNGGFNYVKSN R+IEFYKFWY+SR+
Sbjct: 121 IMWFRDPFPRFFLDADFQIACDHFSGNSSDIQNRPNGGFNYVKSNKRSIEFYKFWYSSRE 180

Query: 253 MFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANCCFGLE 312
            +PG HDQDVLN IKFDP+I+ + +K+RFLDT +  G C+ S+D N VCTMHANCCFGL+
Sbjct: 181 TYPGFHDQDVLNFIKFDPFIESLGLKMRFLDTAFFGGLCEPSKDLNLVCTMHANCCFGLD 240

Query: 313 AKITDLRLALEDWRNFMELPPD-QKSLPRSWTVPKKC 348
           +K+ DL + L+DW+ F+ LPP  ++SL  SW VP+ C
Sbjct: 241 SKLHDLGIMLQDWKTFLSLPPTLKRSLSVSWRVPQNC 277

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120464|ref|XP_002318336.1| predicted protein [Populus trichocarpa] gi|222859009|gb|EEE96556.1| predicted protein [Populus trichocarpa]

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/328 (57%), Positives = 239/328 (72%), Gaps = 5/328 (1%)

Query: 25  IITLFV-VAAVSCLFLYHTANPFEFLPRSSAYDVIAPSM--KAQKSSNDPSLEKILKRAA 81
           I  LF+ V AVSC+ LY +A  FEFLP SS+       +  +  K   D  LE ILK A+
Sbjct: 3   ITVLFLGVLAVSCIVLYKSAYHFEFLPGSSSDSDSLSMLDNRTSKGKFDLELEGILKNAS 62

Query: 82  MGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHP 141
               TVI+TTLNQAWAEP SIFD+FLESF+ G+ T KL+++L+++++D KA   CL+ HP
Sbjct: 63  TKHKTVILTTLNQAWAEPGSIFDLFLESFQVGDNTQKLVNNLIIISMDQKAHARCLAIHP 122

Query: 142 HCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQ 201
           HCYAL T GL+FS  EAYFM+  YL+MMW RI  L  VL MGY+FVFTDADIVWL+NPF 
Sbjct: 123 HCYALRTEGLNFSS-EAYFMSEEYLKMMWRRIEFLGTVLEMGYSFVFTDADIVWLRNPFP 181

Query: 202 RFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQD 261
           RF P  DFQIACD + GN  +  N PNGGF YV+SN RTI+FY+FW+ SR+ +PG HDQD
Sbjct: 182 RFYPKVDFQIACDNYYGNPEDKNNRPNGGFTYVRSNLRTIQFYRFWFQSRETYPGNHDQD 241

Query: 262 VLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANCCFGLEAKITDLRLA 321
           VLN IK DP+++KI++++RFLDT Y  GFC+ S+DF+ VCTMHANCC+GL  K+ DL++ 
Sbjct: 242 VLNMIKNDPFLEKIRLEMRFLDTAYFGGFCERSKDFHEVCTMHANCCYGLGTKVHDLKIV 301

Query: 322 LEDWRNFMELPPDQK-SLPRSWTVPKKC 348
           LEDW+NFM LP  +K S   +W  P+ C
Sbjct: 302 LEDWKNFMSLPLKEKASASPAWRAPQNC 329

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356529763|ref|XP_003533457.1| PREDICTED: uncharacterized protein At4g15970-like [Glycine max]

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/357 (54%), Positives = 247/357 (69%), Gaps = 16/357 (4%)

Query: 1   MSKSIAANPSGEDSK------APLINQRTVIITLFVVA-AVSCLFLYHTANPFEFLPRSS 53
           M  + A   +G+  K      + L  +R + +T+F+V  AV  +FLY+TA+PF F P  S
Sbjct: 1   MKDTTAGTAAGDGIKPWSSGGSHLWARRAMQLTMFLVGFAVLWMFLYNTASPFGF-PGFS 59

Query: 54  AYDVIAPSMKAQKSSNDPSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTG 113
            Y +     ++ K   DP L  +L+ A M D TVIITTLN AWAEP SIFD+FLESFR G
Sbjct: 60  HYYID----ESAKVGYDPKLASVLRNACMKDKTVIITTLNDAWAEPGSIFDLFLESFRLG 115

Query: 114 NGTGKLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRI 173
           N T K L+HLVV+  D KA   CL+ H HCY + T G +F+G EA+FMT+ YL MMW RI
Sbjct: 116 NQTKKFLNHLVVITWDQKAHARCLALHKHCYQVETKGDNFTG-EAFFMTADYLHMMWRRI 174

Query: 174 RLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNY 233
             L  VL MGYNFVFTD DI+WL++PF++F  D DFQIACD F+GNS++L N PNGGFNY
Sbjct: 175 EFLGTVLDMGYNFVFTDTDIMWLRDPFKQFYKDTDFQIACDFFNGNSYDLNNHPNGGFNY 234

Query: 234 VKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQV 293
           VKSN RTI FYKFW+NSR  +P LHDQDVLN+IK D ++  +++K+RFL T Y  GFCQ 
Sbjct: 235 VKSNKRTILFYKFWFNSRNAYPKLHDQDVLNKIKKDSFVSNMKLKVRFLSTSYFGGFCQH 294

Query: 294 SQDFNAVCTMHANCCFGLEAKITDLRLALEDWRNFMELPPDQKSLPR-SWTVPKKCR 349
           ++DFN V TMHANCC GLE K+ DL++ LEDW+ ++ LP  +K+    SW+V   CR
Sbjct: 295 AEDFNKVSTMHANCCVGLENKVNDLKILLEDWKKYVALPESKKNQSHPSWSVS--CR 349

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560053|ref|XP_003548310.1| PREDICTED: uncharacterized protein At4g15970-like [Glycine max]

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 191/345 (55%), Positives = 243/345 (70%), Gaps = 11/345 (3%)

Query: 9   PSGEDSKAPLINQRTVIITLFVVA-AVSCLFLYHTANPFEFLPRSSAYDVIAPSMKAQKS 67
           PS  D    L+ +R +  T+FVV  AV  +FLY+TA+PF F   S  +  I  S KA   
Sbjct: 20  PSSSDGSHLLV-RRAMQFTMFVVGFAVLWMFLYNTASPFGFHGFSHYF--IDESAKA--- 73

Query: 68  SNDPSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVA 127
             DP L+ +L+ A+M D TVIITTLN AWAEP SIFD+FLESF  GN T   L+HLVV+ 
Sbjct: 74  GYDPKLQSVLRNASMKDKTVIITTLNDAWAEPGSIFDLFLESFHLGNQTKMFLNHLVVIT 133

Query: 128 LDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFV 187
            D KA   CL+ H HCY + T G +F+G EA+FMT+ YL MMW RI  L  VL MGYNFV
Sbjct: 134 WDQKAHARCLALHKHCYQVETKGDNFTG-EAFFMTADYLHMMWRRIEFLGTVLDMGYNFV 192

Query: 188 FTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFW 247
           FTD DI+WL++PF+ F  DADFQIACD F+GN+++L N PNGGFNYVKSN RTI FYK+W
Sbjct: 193 FTDTDIMWLRDPFKLFYKDADFQIACDFFNGNTYDLNNSPNGGFNYVKSNKRTISFYKYW 252

Query: 248 YNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANC 307
           +NSR  +P LHDQDVLN+IK + +I  +++KIRFL T Y  GFCQ ++DFN V TMHANC
Sbjct: 253 FNSRNAYPKLHDQDVLNKIKKNSFISNMKLKIRFLSTSYFGGFCQHAKDFNKVSTMHANC 312

Query: 308 CFGLEAKITDLRLALEDWRNFMELPPDQKSLPR-SWTVPKKCRET 351
           C GL+ K+ DL++ LEDW+ ++ LP ++K+    SW+V   CR +
Sbjct: 313 CVGLDNKVNDLKILLEDWKKYVALPENEKNQSHPSWSVS--CRTS 355

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473691|ref|XP_002273214.2| PREDICTED: uncharacterized protein At4g15970 [Vitis vinifera]

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 175/302 (57%), Positives = 229/302 (75%), Gaps = 7/302 (2%)

Query: 53  SAYDVIAPSMKAQKSSNDPS-----LEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFL 107
           + + +I PS  ++  ++ P      LE++LK AAM D+TVI+TTLN+AWA P+S+ D+FL
Sbjct: 94  ATFGLILPSDPSEVGNSPPENEELRLERVLKDAAMEDHTVILTTLNEAWAAPDSVIDLFL 153

Query: 108 ESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLE 167
           ESFR G+ T + L+HLV++ALD KA   CL  H HC+ L T G+DFSG EAYFMTS YL+
Sbjct: 154 ESFRIGDHTRRYLNHLVIIALDQKAFARCLILHNHCFTLVTEGVDFSG-EAYFMTSDYLK 212

Query: 168 MMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEP 227
           MMW RI  L  VL MGYNF+F+DADI+W ++PF  F P+ADFQIACD F G+ +N+ N P
Sbjct: 213 MMWRRIDFLRSVLEMGYNFIFSDADIMWFRDPFPHFLPNADFQIACDHFLGDPYNVNNRP 272

Query: 228 NGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYI 287
           NGGFNYV+SNNR+IEFYKFWY+SR+ +PGLHDQDVLN IKFDP+I  I +++RFLDT + 
Sbjct: 273 NGGFNYVRSNNRSIEFYKFWYSSRETYPGLHDQDVLNIIKFDPFIMNIGLEMRFLDTAHF 332

Query: 288 AGFCQVSQDFNAVCTMHANCCFGLEAKITDLRLALEDWRNFMELPPD-QKSLPRSWTVPK 346
            G C+ S+D N V TMHANCCFGLE+K+ DLR+ L+DW+ +M LPP  ++S   +W VP+
Sbjct: 333 GGLCEPSKDLNLVSTMHANCCFGLESKLHDLRIMLQDWKEYMSLPPSLKRSSEATWRVPQ 392

Query: 347 KC 348
            C
Sbjct: 393 NC 394

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	378
TAIR|locus:2204508	386	AT1G14590 "AT1G14590" [Arabido	0.962	0.943	0.507	7.4e-98
TAIR|locus:4515102789	408	AT2G02061 "AT2G02061" [Arabido	0.902	0.835	0.513	8.4e-97
TAIR|locus:2156304	367	AT5G44820 "AT5G44820" [Arabido	0.857	0.882	0.538	3e-94
TAIR|locus:2119827	715	AT4G19970 "AT4G19970" [Arabido	0.859	0.454	0.532	3.4e-93
TAIR|locus:2018688	338	AT1G28700 "AT1G28700" [Arabido	0.661	0.739	0.435	2.3e-55
TAIR|locus:2018783	340	AT1G28710 "AT1G28710" [Arabido	0.666	0.741	0.429	1.3e-54
TAIR|locus:1006230710	329	AT1G28695 "AT1G28695" [Arabido	0.701	0.805	0.409	4.4e-52
TAIR|locus:2164476	322	AT5G40900 "AT5G40900" [Arabido	0.727	0.854	0.353	9.1e-45
TAIR|locus:2037273	402	RRA1 "REDUCED RESIDUAL ARABINO	0.5	0.470	0.25	1.7e-06
TAIR|locus:2037248	428	RRA2 "REDUCED RESIDUAL ARABINO	0.5	0.441	0.264	2.4e-06

TAIR|locus:2204508 AT1G14590 "AT1G14590" [Arabidopsis thaliana (taxid:3702)]

 Score = 972 (347.2 bits), Expect = 7.4e-98, P = 7.4e-98
 Identities = 192/378 (50%), Positives = 248/378 (65%)

Query:     2 SKSIAANP----SGEDSKAPLINQRTVIITLFVVAAVSCLFLYHTANPFEFLPRSSAYDV 57
             + S A NP    SGE S  P I  R   + L  ++ +SC  LY  A+   F P    +D 
Sbjct:    18 ASSSANNPFAEGSGEMSPGPSIPLRRAALFLAAIS-ISCFVLYRAADSLSFSP--PIFD- 73

Query:    58 IAPSMKAQKSSNDPSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTG 117
                 + +   + +P LE +L +AA  D TV++TTLN AWA P S+ D+F ESFR G  T 
Sbjct:    74 ----LSSYLDNEEPKLEDVLSKAATRDRTVVLTTLNAAWAAPGSVIDLFFESFRIGEETS 129

Query:   118 KLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLS 177
             ++LDHLV+VALD+KA   CL  H HC++L T G+DFS +EAYFMT SYL+MMW RI LL 
Sbjct:   130 QILDHLVIVALDAKAYSRCLELHKHCFSLVTEGVDFS-REAYFMTRSYLKMMWRRIDLLR 188

Query:   178 DVLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSN 237
              VL MGYNFVFTDAD++W +NPF RF   ADFQIACD + G S +L N PNGGFN+V+SN
Sbjct:   189 SVLEMGYNFVFTDADVMWFRNPFPRFYMYADFQIACDHYLGRSNDLHNRPNGGFNFVRSN 248

Query:   238 NRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDF 297
             NRTI FYK+WY SR  FPG HDQDVLN +K +P++ +I +K+RFL+T Y  G C+ S+D 
Sbjct:   249 NRTILFYKYWYASRLRFPGYHDQDVLNFLKAEPFVFRIGLKMRFLNTAYFGGLCEPSRDL 308

Query:   298 NAVCTMHANCCFGLEAKITDLRLALEDWRNFMELPPDQK-SLPRSWTVPKKCRETPFHPP 356
             N V TMHANCC+G+E+K+ DLR+ L+DW++FM LP   K S   SW VP+ C        
Sbjct:   309 NLVRTMHANCCYGMESKLHDLRIMLQDWKDFMSLPLHLKQSSGFSWKVPQNCSLDSLRRY 368

Query:   357 DESPNSLPPAAPKISAQE 374
             DES      + P   +Q+
Sbjct:   369 DESVEDDEESDPPGESQD 386

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

TAIR|locus:4515102789 AT2G02061 "AT2G02061" [Arabidopsis thaliana (taxid:3702)]

 Score = 962 (343.7 bits), Expect = 8.4e-97, P = 8.4e-97
 Identities = 185/360 (51%), Positives = 237/360 (65%)

Query:    22 RTVIITLFVVAAVSCLFLYHTANPFEFLPRSSA-YDVIAPSMKAQKSSNDPS-------- 72
             R V++  F+     C  LY T+     +  SS+    I PS+    SS  PS        
Sbjct:    47 RAVLLLFFICF---CFSLYRTSGYLRIVSDSSSTLSRIFPSVNDSSSSPSPSPSLSPEEI 103

Query:    73 ----LEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVAL 128
                 LE++L+RAA  D TVI+TTLN+AWA P S+ D+F ESFR G GT +LL HLV++AL
Sbjct:   104 EEPKLEEVLRRAATKDGTVILTTLNEAWAAPGSVIDLFFESFRIGKGTRRLLKHLVIIAL 163

Query:   129 DSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVF 188
             D+KA   C   H HC+ L T G+DFSG EAYFMT SYL MMW RI  L  VL  GYNFVF
Sbjct:   164 DAKAYSRCQELHKHCFRLETEGVDFSGGEAYFMTPSYLTMMWRRISFLRSVLEKGYNFVF 223

Query:   189 TDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWY 248
             TDAD++W +NPF+RF  D DFQIACD + G   + RN PNGGF +V++NNR+I FYKFWY
Sbjct:   224 TDADVMWFRNPFRRFYEDGDFQIACDHYIGRPNDFRNRPNGGFTFVRANNRSIGFYKFWY 283

Query:   249 NSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANCC 308
             +SR  +P  HDQDVLN IK DP++ K++++IRFL+T Y  GFC+ S+D N VCTMHANCC
Sbjct:   284 DSRTKYPKNHDQDVLNFIKTDPFLWKLRIRIRFLNTVYFGGFCEPSKDLNLVCTMHANCC 343

Query:   309 FGLEAKITDLRLALEDWRNFMELP-PDQKSLPRSWTVPKKCRETPFHPPD--ESPNSLPP 365
             FGL++K+ DLR+ L+DWR+F  LP    +S   +W+VP+ C      P D  +   S PP
Sbjct:   344 FGLDSKLHDLRIMLQDWRDFKSLPLHSNQSSGFTWSVPQNCSLDSLRPVDSKDEEESEPP 403

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2156304 AT5G44820 "AT5G44820" [Arabidopsis thaliana (taxid:3702)]

 Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
 Identities = 183/340 (53%), Positives = 236/340 (69%)

Query:    23 TVIITLFVVAAVSCLFLYHTANPFEFLPRSSAYDVIA------PSMKAQKSSND---PSL 73
             T I+ LF+    SCL LY TA P + L  S+   + A      P++ + + S +   P L
Sbjct:    31 TRILILFLGLTASCLVLYKTAYPLQRLNVSNLTSLQASPSPLLPNLNSSEISPETTKPKL 90

Query:    74 --EKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSK 131
               ++IL+ A+  +NTVIITTLNQAWAEPNS+FD+FLESFR G GT +LL H+VVV LD K
Sbjct:    91 SFKEILENASTKNNTVIITTLNQAWAEPNSLFDLFLESFRIGQGTQQLLKHVVVVCLDIK 150

Query:   132 ALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDA 191
             A + C   H +CY + TS  DFSG++ Y  T  YL+MMW RI LL+ VL MG+NF+FTDA
Sbjct:   151 AFERCSQLHTNCYHIETSETDFSGEKVY-NTPDYLKMMWARIDLLTQVLEMGFNFIFTDA 209

Query:   192 DIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSR 251
             DI+WL++PF R  PD DFQ+ACDRF GN ++  N  NGGF YV+SNNR+IEFYKFW+ SR
Sbjct:   210 DIMWLRDPFPRLYPDGDFQMACDRFFGNPYDSDNWVNGGFTYVRSNNRSIEFYKFWHKSR 269

Query:   252 KMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANCCFGL 311
               +P LHDQDV N IK +P+I +I +++RF DT Y  GFCQ S+D N VCTMHANCC GL
Sbjct:   270 LDYPDLHDQDVFNRIKHEPFISEIGIQMRFFDTVYFGGFCQTSRDINLVCTMHANCCIGL 329

Query:   312 EAKITDLRLALEDWRNFMELP-PDQKSLPRSWTVPKKCRE 350
             + K+ DL L L+DWR ++ L  P Q +   +W+VP KC E
Sbjct:   330 DKKLHDLNLVLDDWRKYLSLSEPVQNT---TWSVPMKCLE 366

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2119827 AT4G19970 "AT4G19970" [Arabidopsis thaliana (taxid:3702)]

 Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
 Identities = 180/338 (53%), Positives = 227/338 (67%)

Query:    19 INQRTVI-ITLFVVAAVSCLFLYHTANPFEFLPRSSAYDVIAPSMKAQKSSNDP------ 71
             I Q+ V  I + V+   +CL LY TA P          ++ +  +    SS+ P      
Sbjct:   382 IGQKEVKKILVLVLGLAACLLLYKTAYPLH--QELDVNNLSSRPLLDHTSSSSPLTRSKS 439

Query:    72 -SLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDS 130
              S  ++L+ A+  + TVI+TTLNQAWAEPNS+FD+FLESFR G GT KLL H+VVV LDS
Sbjct:   440 ISFREVLENASTENRTVIVTTLNQAWAEPNSLFDLFLESFRIGQGTKKLLQHVVVVCLDS 499

Query:   131 KALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTD 190
             KA   C   HP+CY L T+G DFSG E  F T  YL+MMW RI LL+ VL MGYNF+FTD
Sbjct:   500 KAFARCSQLHPNCYYLKTTGTDFSG-EKLFATPDYLKMMWRRIELLTQVLEMGYNFIFTD 558

Query:   191 ADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNS 250
             ADI+WL++PF R  PD DFQ+ACDRF G+  +  N  NGGF YVKSN+R+IEFYKFWYNS
Sbjct:   559 ADIMWLRDPFPRLYPDGDFQMACDRFFGDPHDSDNWVNGGFTYVKSNHRSIEFYKFWYNS 618

Query:   251 RKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHANCCFG 310
             R  +P +HDQDV N+IK    + +I +++RF DT Y  GFCQ S+D N VCTMHANCC G
Sbjct:   619 RLDYPKMHDQDVFNQIKHKALVSEIGIQMRFFDTVYFGGFCQTSRDINLVCTMHANCCVG 678

Query:   311 LEAKITDLRLALEDWRNFMELPPDQKSLPRSWTVPKKC 348
             L  K+ DL L L+DWRN++ L    K+   +W+VP KC
Sbjct:   679 LAKKLHDLNLVLDDWRNYLSLSEPVKNT--TWSVPMKC 714

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2018688 AT1G28700 "AT1G28700" [Arabidopsis thaliana (taxid:3702)]

 Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
 Identities = 114/262 (43%), Positives = 166/262 (63%)

Query:    73 LEKILKRAAMGDN-TVIITTLNQAWAEPN----SIFDIFLESFRTGNGTGKLLDHLVVVA 127
             LE +L +A+ G+N TVII  +N+A+ E +    ++ D+FLESF  G GT  LL+HL+VVA
Sbjct:    55 LETVLDKASTGNNKTVIIAMVNKAYVEEDGGGRTMLDLFLESFWEGEGTRPLLNHLMVVA 114

Query:   128 LDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFV 187
              D  A D CL    HCY ++T G+D  G++ Y M+  ++EMMW R RLL DVL+ GY+ +
Sbjct:   115 ADQTAYDRCLFRRLHCYKMDTEGVDLEGEKVY-MSKDFIEMMWRRTRLLLDVLSRGYHII 173

Query:   188 FTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEP-NGGFNYVKSNNRTIEFYKF 246
             FTD D++WL++P  R +   D  I+ DR   N  N+R +  N GF + +SNN+TI  ++ 
Sbjct:   174 FTDTDVMWLRSPLSRLNVSLDMHISVDR---N--NVRGQLINTGFYHARSNNKTISLFQK 228

Query:   247 WYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHAN 306
             WY+ R    G+ +QDVL  +    +  ++ + + FL T   +GFCQ S D  AV T+HAN
Sbjct:   229 WYDMRLKSLGMKEQDVLKNLLDSGFFNQLGLNVGFLSTAEFSGFCQDSPDMGAVTTVHAN 288

Query:   307 CCFGLEAKITDLRLALEDWRNF 328
             CC  + AKI+DL LAL DW+ +
Sbjct:   289 CCVHIPAKISDLSLALRDWKRY 310

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2018783 AT1G28710 "AT1G28710" [Arabidopsis thaliana (taxid:3702)]

 Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
 Identities = 113/263 (42%), Positives = 163/263 (61%)

Query:    73 LEKILKRAAMGDN-TVIITTLNQAWAEP----NSIFDIFLESFRTGNGTGKLLDHLVVVA 127
             LE +L +AAMG+N TVII  +N+A+ E      ++ D+FLESF  G GT  LLDHL++VA
Sbjct:    54 LEAVLDKAAMGNNKTVIIAMVNKAYVEEVEGGRTMLDLFLESFWEGEGTRPLLDHLMLVA 113

Query:   128 LDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFV 187
              D  + D CL    HCY ++T G+D  G++ Y M+  ++EMMW R  LL DVL+ GYN  
Sbjct:   114 ADQTSYDRCLFRRLHCYKMDTDGVDLEGEKVY-MSKDFIEMMWRRTHLLLDVLSRGYNLT 172

Query:   188 FTDADIVWLQNPFQR--FDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYK 245
             FTD D++WL++PF R  ++   D QI+ D       +L N    GF +V+SNN+TI  ++
Sbjct:   173 FTDTDVMWLRSPFPRLSYNESLDMQISVDSIGLVGGHLINT---GFYHVRSNNKTISLFQ 229

Query:   246 FWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHA 305
              WY+ R    G+ +QDVL  +    +  ++ + + FL+T   +GFCQ S D   V T+HA
Sbjct:   230 KWYDMRLKSTGMKEQDVLKSLLDSGFFNQLGLNVGFLNTTEFSGFCQDSHDMGVVTTVHA 289

Query:   306 NCCFGLEAKITDLRLALEDWRNF 328
             NCC  + AKI+DL L L DW+ +
Sbjct:   290 NCCRHILAKISDLTLVLRDWKRY 312

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:1006230710 AT1G28695 "AT1G28695" [Arabidopsis thaliana (taxid:3702)]

 Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
 Identities = 115/281 (40%), Positives = 162/281 (57%)

Query:    73 LEKILKRAAMGDN-TVIITTLNQAWAEP----NSIFDIFLESFRTGNGTGKLLDHLVVVA 127
             LE  L  AA G+N TVIIT +N+A+ +     +++ D+FLESF  G GT  LLDHL+VVA
Sbjct:    45 LEAALYTAAAGNNKTVIITMVNKAYVKEVGRGSTMLDLFLESFWEGEGTLPLLDHLMVVA 104

Query:   128 LDSKALDHCLSTHPHCYALNTS-GLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNF 186
             +D  A D C     HCY + T  G+D  G E  FM+  ++EMMW R RL+ DVL  GYN 
Sbjct:   105 VDQTAYDRCRFKRLHCYKMETEDGVDLEG-EKVFMSKDFIEMMWRRTRLILDVLRRGYNV 163

Query:   187 VFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKF 246
             +FTD D++WL++P  R +   D QI+ DR +     +    N GF +V+SNN+TI  ++ 
Sbjct:   164 IFTDTDVMWLRSPLSRLNMSLDMQISVDRINVGGQLI----NTGFYHVRSNNKTISLFQK 219

Query:   247 WYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQDFNAVCTMHAN 306
             WY+ R    G+ +QDVL  +    +  ++ + + FL T   +GFCQ S     V T+HAN
Sbjct:   220 WYDMRLNSTGMKEQDVLKNLLDSGFFNQLGLNVGFLSTTEFSGFCQDSPHMGVVTTVHAN 279

Query:   307 CCFGLEAKITDLRLALEDWRNFMELPPDQKSLP-----RSW 342
             CC  + AK+ DL   L DW+ +     + K  P     RSW
Sbjct:   280 CCLHIPAKVFDLTRVLRDWKRYKASHVNSKWSPHLKCSRSW 320

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2164476 AT5G40900 "AT5G40900" [Arabidopsis thaliana (taxid:3702)]

 Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
 Identities = 103/291 (35%), Positives = 164/291 (56%)

Query:    40 YHTANPFEFLPRSSAYDVIAPSMKAQKSSNDPSLEKILKRAAMGDNTVIITTLNQAWAEP 99
             +H+  P+    R + +  + P     +SS    L  +LK AA  D  VIIT +++ WA+P
Sbjct:    32 HHSCAPYMNTIRGTQFSHLQP-----ESSG---LSSLLKEAATEDKIVIITMVDREWAKP 83

Query:   100 NSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAY 159
             +SI D+FLES R G  T  LL+HL+VVALD +AL +CL  HPHCY L+     +S K++ 
Sbjct:    84 DSILDLFLESVRIGERTKHLLNHLIVVALDDQALRYCLRAHPHCY-LHR----YSRKKSE 138

Query:   160 FMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDR--FS 217
              +    L   W +  L+ ++L +GY+ +FT+AD++WL+NP    +P     +AC      
Sbjct:   139 SLKPDGLVTGWNKKSLVKEILELGYHIMFTEADVMWLRNPLMHCNPQNAISVACGNSLID 198

Query:   218 GNSFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQV 277
                 +L  E  GGF Y KSN+ TI+ +      R ++P   +Q + + +K +  I+ +  
Sbjct:   199 HQHDHLTTENTGGFFYAKSNDITIDMFNILNVERVLYPATGNQSLCDIVKREDVIKALDK 258

Query:   278 KIRFLDTKYIAGFCQVS-QDFNAVCTMHANCCFGLEAKITDLRLALEDWRN 327
             K+ FLD      FCQ + QD + + T+HA+CC   ++K+  L+L L+D +N
Sbjct:   259 KVTFLDDANFGKFCQPNPQDQSKITTVHASCCHDTKSKVRYLKLLLQDRKN 309

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2037273 RRA1 "REDUCED RESIDUAL ARABINOSE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 53/212 (25%), Positives = 100/212 (47%)

Query:    60 PSMKAQKSSNDPSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKL 119
             P++   +S+N P L K+L++ A+    +++   N    +P  + ++ + S +     G  
Sbjct:   109 PTVAPDESAN-PRLAKLLEKVAVNKEIIVVLANNNV--KP--MLEVQIASVKR---VG-- 158

Query:   120 LDHLVVVALDSKALDHCLSTHPHCYALNT-SGLDFSGKEAYFMTSSYLEMMWIRIRLLSD 178
             + + +VV LD      C S     Y  +  + +D  GK      SS  ++  ++ R+L +
Sbjct:   159 IQNYLVVPLDDSLESFCKSNEVAYYKRDPDNAIDVVGKSR---RSS--DVSGLKFRVLRE 213

Query:   179 VLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNY-VKSN 237
              L +GY  + +D DIV+LQNPF     D+D +   D   G+  N     N  F+    + 
Sbjct:   214 FLQLGYGVLLSDVDIVFLQNPFGHLYRDSDVESMSD---GHDNNTAYGFNDVFDDPTMTR 270

Query:   238 NRTIEFYKFW-YNSRKMF--PGLHDQDVLNEI 266
             +RT+   + W +NS   +  P L   ++L+ +
Sbjct:   271 SRTVYTNRIWVFNSGFFYLRPTLPSIELLDRV 302

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0080147 "root hair cell development" evidence=IMP

TAIR|locus:2037248 RRA2 "REDUCED RESIDUAL ARABINOSE 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 56/212 (26%), Positives = 97/212 (45%)

Query:    60 PSMKAQKSSNDPSLEKILKRAAMGDNTVIITTLNQAWAEPNSIFDIFLESFRTGNGTGKL 119
             P++   +S N P L K+L++ A+  N  II  L  +  +P  + ++ + S +     G  
Sbjct:   134 PTVVPDESVN-PRLAKLLEKVAV--NKEIIVVLANSNVKP--MLELQIASVKR---VG-- 183

Query:   120 LDHLVVVALDSKALDHCLSTHPHCYALNTS-GLDFSGKEAYFMTSSYLEMMWIRIRLLSD 178
             + + ++VALD      C S     Y  +    +D  GK       S L     + R+L +
Sbjct:   184 IQNYLIVALDDSMESFCESKEVVFYKRDPDKAVDMVGKSGGNHAVSGL-----KFRVLRE 238

Query:   179 VLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNS---FN-LRNEPNGGFNYV 234
              L +GY+ + +D DIV+LQNPF     D+D +   D    N+   FN + +EP+ G+   
Sbjct:   239 FLQLGYSVLLSDVDIVFLQNPFSHLHRDSDVESMSDGHDNNTAYGFNDVFDEPSMGWARY 298

Query:   235 KSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEI 266
                 R   F   ++  R   P +   D+L+ +
Sbjct:   299 AHTMRIWVFNSGFFYLRPTIPSI---DLLDRV 327

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0080147 "root hair cell development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_X000914 hypothetical protein (404 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	378
pfam03407	208	pfam03407, Nucleotid_trans, Nucleotide-diphospho-s	7e-78

>gnl|CDD|217539 pfam03407, Nucleotid_trans, Nucleotide-diphospho-sugar transferase

 Score =  238 bits (609), Expect = 7e-78
 Identities = 89/209 (42%), Positives = 123/209 (58%), Gaps = 9/209 (4%)

Query: 118 KLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLS 177
            LL++L+VVALD +A   C    PH   L +   D S K+  F + +YL+M W R+RLL 
Sbjct: 1   GLLENLLVVALDEEAYKRCKELGPHICYLLSDVKDVSKKDFVFGSKTYLKMSWRRVRLLL 60

Query: 178 DVLAMGYNFVFTDADIVWLQNPFQRFD-PDADFQIACDRFSGNSFN-LRNEPNGGFNYVK 235
           ++L +GYNF+F+D D+VWL+NPF     PDAD  I+ D + G + + L+N  NGGF YV+
Sbjct: 61  ELLELGYNFIFSDVDVVWLRNPFPLLYLPDADIIISSDNYDGTTADGLKNWLNGGFFYVR 120

Query: 236 SNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVSQ 295
             NR+I  +K W      +PGLHDQDV N +  +    ++  K RFLDT    GFCQ   
Sbjct: 121 PTNRSIALFKKWAERLLTYPGLHDQDVFNYLLREGAAGELGYKCRFLDTALFGGFCQSR- 179

Query: 296 DFNAVCT------MHANCCFGLEAKITDL 318
           D+  V T      +HANCC G + K+  L
Sbjct: 180 DWKYVQTDKKPVAVHANCCSGTDGKLHRL 208

Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. Length = 208

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	378
PF03407	212	Nucleotid_trans: Nucleotide-diphospho-sugar transf	100.0
cd02537	240	GT8_Glycogenin Glycogenin belongs the GT 8 family	98.13
PF05637	239	Glyco_transf_34: galactosyl transferase GMA12/MNN1	97.99
cd04194	248	GT8_A4GalT_like A4GalT_like proteins catalyze the	97.86
cd00505	246	Glyco_transf_8 Members of glycosyltransferase fami	97.73
PLN00176	333	galactinol synthase	97.45
PLN03181	453	glycosyltransferase; Provisional	97.44
PLN03182	429	xyloglucan 6-xylosyltransferase; Provisional	97.4
cd06914	278	GT8_GNT1 GNT1 is a fungal enzyme that belongs to t	97.04
cd06430	304	GT8_like_2 GT8_like_2 represents a subfamily of GT	96.7
PF01501	250	Glyco_transf_8: Glycosyl transferase family 8; Int	96.64
cd06431	280	GT8_LARGE_C LARGE catalytic domain has closest hom	96.08
cd06432	248	GT8_HUGT1_C_like The C-terminal domain of HUGT1-li	94.59
PRK15171	334	lipopolysaccharide 1,3-galactosyltransferase; Prov	94.08
PF03314	222	DUF273: Protein of unknown function, DUF273; Inter	93.8
COG1442	325	RfaJ Lipopolysaccharide biosynthesis proteins, LPS	93.24
cd06429	257	GT8_like_1 GT8_like_1 represents a subfamily of GT	92.02
PLN02910	657	polygalacturonate 4-alpha-galacturonosyltransferas	85.38
PLN02829	639	Probable galacturonosyltransferase	84.53
PLN02867	535	Probable galacturonosyltransferase	82.43
PLN02718	603	Probable galacturonosyltransferase	80.88

>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases []

Probab=100.00  E-value=6.5e-42  Score=316.34  Aligned_cols=201  Identities=31%  Similarity=0.591  Sum_probs=173.2

Q ss_pred             cccCcEEEEEcChHHHHHhHhcCCcEEEecCCCCCCCcchhccccHHHHHHHHHHHHHHHHHHHcCCcEEEeeccEEecc
Q 017033          118 KLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQ  197 (378)
Q Consensus       118 ~l~~~llVvAlD~~a~~~c~~~g~~cy~~~~~~~d~~~~~~~f~s~~yl~m~w~K~~~l~~vL~lGy~vLftDvDVVWlR  197 (378)
                      ++++|++|+|+|+++++.|++.|++|+.......+.......|+++.|.+++|.|+.+++++|++||+|+|+|+||||+|
T Consensus         1 ~~~~~~lv~a~D~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~   80 (212)
T PF03407_consen    1 HLIDNFLVVALDEETYDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVWLR   80 (212)
T ss_pred             CccccEEEEEECHHHHHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEEec
Confidence            46899999999999999999999999887764222332378999999999999999999999999999999999999999


Q ss_pred             Cccccc-CCCCcEEEeccCCCCCC-CCCCCCCCceEEEEeeCHHHHHHHHHHHHHHhcCCCCCchHHHHHHHcCCCCCCC
Q 017033          198 NPFQRF-DPDADFQIACDRFSGNS-FNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKI  275 (378)
Q Consensus       198 nPfp~~-~~~aDi~issD~~~g~~-~d~~~~~NtGf~yvRst~rti~f~~~W~~~r~~~p~~~DQ~vfN~il~~~~~~~~  275 (378)
                      ||+++| ++++|+++++|...+.+ ...++.+|+||||+|+|++|++|++.|.......++.+||.+||.++........
T Consensus        81 dp~~~~~~~~~Di~~~~d~~~~~~~~~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~~~~~DQ~~~n~~l~~~~~~~~  160 (212)
T PF03407_consen   81 DPLPYFENPDADILFSSDGWDGTNSDRNGNLVNTGFYYFRPTPRTIAFLEDWLERMAESPGCWDQQAFNELLREQAARYG  160 (212)
T ss_pred             CcHHhhccCCCceEEecCCCcccchhhcCCccccceEEEecCHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHhcccCCc
Confidence            999999 88999999999887653 3345568999999999999999999999988888888999999999965433337


Q ss_pred             ceEEEEccccccC----Cccc-ccC-C---CCceEEEEecccCChhhHHHHH
Q 017033          276 QVKIRFLDTKYIA----GFCQ-VSQ-D---FNAVCTMHANCCFGLEAKITDL  318 (378)
Q Consensus       276 gl~v~~Ld~~~F~----Gfcq-~~k-d---~~~~~tvHaNc~~G~~~K~~~L  318 (378)
                      ++++++||+.+|+    .|++ ... .   ..+|++||+|||.|.++|+++|
T Consensus       161 ~~~~~~L~~~~f~~g~~~f~~~~~~~~~~~~~~p~~vH~n~~~g~~~K~~~~  212 (212)
T PF03407_consen  161 GLRVRFLPPSLFPNGHGYFCQSRDWAWVPTKNKPYIVHANCCDGKEGKRQRF  212 (212)
T ss_pred             CcEEEEeCHHHeeccccceeecchhhhhccccccceEEEcCCCChHhHHhhC
Confidence            9999999999994    3777 211 1   3579999999999999999886

>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

Probab=98.13  E-value=7.9e-05  Score=70.85  Aligned_cols=189  Identities=19%  Similarity=0.132  Sum_probs=108.1

Q ss_pred             ecccccCCCchHHHHHHHhhhccCCccccCcEEEEE---cChHHHHHhHhcCCcEEEecCCCCCCCcchhccccHHHHHH
Q 017033           92 LNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVA---LDSKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEM  168 (378)
Q Consensus        92 ~N~a~a~p~s~lDlfLes~r~g~~t~~l~~~llVvA---lD~~a~~~c~~~g~~cy~~~~~~~d~~~~~~~f~s~~yl~m  168 (378)
                      +|.+|+.+   +-..+.|++.. .. . . +++|+.   +.++..+.+++.+..+..+..  .+... ........+.+.
T Consensus         8 ~~~~Y~~~---a~vl~~SL~~~-~~-~-~-~~~vl~~~~is~~~~~~L~~~~~~~~~v~~--i~~~~-~~~~~~~~~~~~   77 (240)
T cd02537           8 TNDDYLPG---ALVLGYSLRKV-GS-S-Y-DLVVLVTPGVSEESREALEEVGWIVREVEP--IDPPD-SANLLKRPRFKD   77 (240)
T ss_pred             cChhHHHH---HHHHHHHHHhc-CC-C-C-CEEEEECCCCCHHHHHHHHHcCCEEEecCc--cCCcc-hhhhccchHHHH
Confidence            45577521   22345566542 11 1 2 344443   346667888888866655442  22211 111123346677


Q ss_pred             HHHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCCCCcEEEeccCCCCCCCCCCCCCCceEEEEeeCHHHHHHHHHH
Q 017033          169 MWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYKFW  247 (378)
Q Consensus       169 ~w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~~aDi~issD~~~g~~~d~~~~~NtGf~yvRst~rti~f~~~W  247 (378)
                      +|.|+.+...   .+| .||+.|+|++.++|+-+.|..+..+....|...      ....|+||+.++++....+-+.+.
T Consensus        78 ~~~kl~~~~l---~~~drvlylD~D~~v~~~i~~Lf~~~~~~~a~~d~~~------~~~fNsGv~l~~~~~~~~~~~~~~  148 (240)
T cd02537          78 TYTKLRLWNL---TEYDKVVFLDADTLVLRNIDELFDLPGEFAAAPDCGW------PDLFNSGVFVLKPSEETFNDLLDA  148 (240)
T ss_pred             HhHHHHhccc---cccceEEEEeCCeeEccCHHHHhCCCCceeeecccCc------cccccceEEEEcCCHHHHHHHHHH
Confidence            8889776652   256 599999999999998887765222333333211      356899999999987665544443


Q ss_pred             HHHHhcCCCCCchHHHHHHHcCCCCCCCceEEEEccccc-c-CCcccc-c---CCCCceEEEEec
Q 017033          248 YNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKY-I-AGFCQV-S---QDFNAVCTMHAN  306 (378)
Q Consensus       248 ~~~r~~~p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~-F-~Gfcq~-~---kd~~~~~tvHaN  306 (378)
                      ...... ...+||+++|.+....     | .++.||..+ + .+++.. .   .....+.++|=.
T Consensus       149 ~~~~~~-~~~~DQdiLN~~~~~~-----~-~~~~l~~~yN~~~~~~~~~~~~~~~~~~~~iiHf~  206 (240)
T cd02537         149 LQDTPS-FDGGDQGLLNSYFSDR-----G-IWKRLPFTYNALKPLRYLHPEALWFGDEIKVVHFI  206 (240)
T ss_pred             HhccCC-CCCCCHHHHHHHHcCC-----C-CEeECCcceeeehhhhccCchhhcccCCcEEEEEe
Confidence            332211 3458999999999431     1 567777663 1 122111 1   223567888854

Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.

>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif

Probab=97.99  E-value=8.3e-06  Score=77.97  Aligned_cols=164  Identities=15%  Similarity=0.165  Sum_probs=34.6

Q ss_pred             HHHhHhcCCcEEEecCCCCCCCcchhccccHHHHHHHHHHHHHHHHHHHcC---CcEEEeeccEEeccCccc---ccC-C
Q 017033          133 LDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMG---YNFVFTDADIVWLQNPFQ---RFD-P  205 (378)
Q Consensus       133 ~~~c~~~g~~cy~~~~~~~d~~~~~~~f~s~~yl~m~w~K~~~l~~vL~lG---y~vLftDvDVVWlRnPfp---~~~-~  205 (378)
                      .++|+..|..+|.......+..          -....|.|+.++++.+..=   ==|+|.|.|++...-=++   ++. +
T Consensus        34 ~~Ya~~HgY~~~~~~~~~~~~~----------~~~~~W~K~~~lr~~m~~~P~~~wv~~lD~Dali~n~~~~L~~~il~p  103 (239)
T PF05637_consen   34 VDYARRHGYDLYYRNIQEYDDP----------ERPGSWAKIPALRAAMKKYPEAEWVWWLDSDALIMNPDFSLEEHILSP  103 (239)
T ss_dssp             HHHHHHHT-EEEEE-S--S--S----------HHHHHHTHHHHHHHHHHH-TT-SEEEEE-TTEEE--------------
T ss_pred             HHHHHhcCCEEEEEChHHcCCC----------CCChhhHHHHHHHHHHHhCCCCCEEEEEcCCeEEEecccccccccccc
Confidence            6899999988887553221111          1345699999999999652   238999999987642233   111 0


Q ss_pred             -CC------cEE-EeccCCCCC-----CC-------CCCCCCCceEEEEeeCHHHHHHHHHHHHHHhcCC-----CCCch
Q 017033          206 -DA------DFQ-IACDRFSGN-----SF-------NLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFP-----GLHDQ  260 (378)
Q Consensus       206 -~a------Di~-issD~~~g~-----~~-------d~~~~~NtGf~yvRst~rti~f~~~W~~~r~~~p-----~~~DQ  260 (378)
                       .-      |.- +.-+...+.     +.       .-.+.+|+|+|++|.++-|+.|++.|..-+....     ...||
T Consensus       104 ~~L~~~~~r~~~~~p~~~~~~~~~~~~~~~~~li~t~d~~gLNtGsFliRns~ws~~fLd~w~~~~~~~~~~~~~~~~EQ  183 (239)
T PF05637_consen  104 SRLDSLLLRDVPIVPPDSIIKTYSVIDGNDIHLIITQDWNGLNTGSFLIRNSPWSRDFLDAWADPLYRNYDWDQLEFDEQ  183 (239)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence             00      000 011111000     00       1124589999999999999999999987554322     34699


Q ss_pred             HHHHHHHcCCCCCCCceEEEEccccccCCccccc---CCCCceEEEEeccc
Q 017033          261 DVLNEIKFDPYIQKIQVKIRFLDTKYIAGFCQVS---QDFNAVCTMHANCC  308 (378)
Q Consensus       261 ~vfN~il~~~~~~~~gl~v~~Ld~~~F~Gfcq~~---kd~~~~~tvHaNc~  308 (378)
                      .+|-.++...  ....-++.+++...|..|....   .......++|-.-|
T Consensus       184 sAl~~ll~~~--~~~~~~~~~vpq~~~nsy~~~~~~~~~~~GDfvvhfaGC  232 (239)
T PF05637_consen  184 SALEHLLQWH--PEILSKVALVPQRWFNSYPEDECNYQYKEGDFVVHFAGC  232 (239)
T ss_dssp             ---------------------------------------------------
T ss_pred             cccccccccc--ccccccccccccccccccccccccccccccccccccccc
Confidence            9999888431  2234456788888886654432   22234467777666

This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface

Probab=97.86  E-value=0.00026  Score=66.99  Aligned_cols=203  Identities=19%  Similarity=0.224  Sum_probs=108.5

Q ss_pred             EEEEecccccCCCchHHHHHHHhhhccCCccccCcEEEEEcC--hHHHHHhHhc----CCcEEEecCCCCCCCcchhccc
Q 017033           88 IITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALD--SKALDHCLST----HPHCYALNTSGLDFSGKEAYFM  161 (378)
Q Consensus        88 IvT~~N~a~a~p~s~lDlfLes~r~g~~t~~l~~~llVvAlD--~~a~~~c~~~----g~~cy~~~~~~~d~~~~~~~f~  161 (378)
                      |+.++|+.|..+   +-..+.|++..  ....--++.|++.|  ++..+.+++.    +..+-.......++.. . ...
T Consensus         3 I~~~~d~~y~~~---~~~~l~Sl~~~--~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~i~~~~~~~-~-~~~   75 (248)
T cd04194           3 IVFAIDDNYAPY---LAVTIKSILAN--NSKRDYDFYILNDDISEENKKKLKELLKKYNSSIEFIKIDNDDFKF-F-PAT   75 (248)
T ss_pred             EEEEecHhhHHH---HHHHHHHHHhc--CCCCceEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEcCHHHHhc-C-Ccc
Confidence            677889888621   22355676542  21122345566644  6667777665    3232222221111111 0 001


Q ss_pred             cHHHHHHHHHHHHHHHHHHHcCCc-EEEeeccEEeccCcccccCCC---CcEEEeccCCCCC---------CCCCCCCCC
Q 017033          162 TSSYLEMMWIRIRLLSDVLAMGYN-FVFTDADIVWLQNPFQRFDPD---ADFQIACDRFSGN---------SFNLRNEPN  228 (378)
Q Consensus       162 s~~yl~m~w~K~~~l~~vL~lGy~-vLftDvDVVWlRnPfp~~~~~---aDi~issD~~~g~---------~~d~~~~~N  228 (378)
                      ...|..++..|+.+ -+++. +|+ ||+.|+|++-++|+-+.+..+   .-+....|.+...         ........|
T Consensus        76 ~~~~~~~~y~rl~l-~~ll~-~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfN  153 (248)
T cd04194          76 TDHISYATYYRLLI-PDLLP-DYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKRKRRLGGYDDGSYFN  153 (248)
T ss_pred             cccccHHHHHHHHH-HHHhc-ccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHHHhhcCCCcccceee
Confidence            22233445556544 44555 674 999999999999988877542   3344455654310         011234689


Q ss_pred             ceEEEEeeCHHH-HHHHHHHHHHHhcC---CCCCchHHHHHHHcCCCCCCCceEEEEccccc--cCCccccc--------
Q 017033          229 GGFNYVKSNNRT-IEFYKFWYNSRKMF---PGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKY--IAGFCQVS--------  294 (378)
Q Consensus       229 tGf~yvRst~rt-i~f~~~W~~~r~~~---p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~--F~Gfcq~~--------  294 (378)
                      +|+|.+..+.-. ..+.+.+.+.....   ....||++||.+...        +++.||..+  ..+.+...        
T Consensus       154 sGv~l~nl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~--------~~~~L~~~~N~~~~~~~~~~~~~~~~~  225 (248)
T cd04194         154 SGVLLINLKKWREENITEKLLELIKEYGGRLIYPDQDILNAVLKD--------KILYLPPRYNFQTGFYYLLKKKSKEEQ  225 (248)
T ss_pred             ecchheeHHHHHHhhhHHHHHHHHHhCCCceeeCChHHHHHHHhC--------CeEEcCcccccchhHhHHhhccchhHH
Confidence            999999766422 23333333322222   346899999999943        168888653  22322211        


Q ss_pred             ---CCCCceEEEEecc
Q 017033          295 ---QDFNAVCTMHANC  307 (378)
Q Consensus       295 ---kd~~~~~tvHaNc  307 (378)
                         .....+.++|-+.
T Consensus       226 ~~~~~~~~~~iiHf~g  241 (248)
T cd04194         226 ELEEARKNPVIIHYTG  241 (248)
T ss_pred             HHHHHhcCCEEEEeCC
Confidence               2245678888663

The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys

>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis

Probab=97.73  E-value=0.0019  Score=61.23  Aligned_cols=134  Identities=18%  Similarity=0.171  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCCC---CcEEEeccCCCCC----------CCCCCCCCCceEE
Q 017033          167 EMMWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPD---ADFQIACDRFSGN----------SFNLRNEPNGGFN  232 (378)
Q Consensus       167 ~m~w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~~---aDi~issD~~~g~----------~~d~~~~~NtGf~  232 (378)
                      ..++.|+. +-++|. .| .||+.|+|++-++|.-+.+.-+   .-+.+..|+....          ........|+|+|
T Consensus        81 ~~~y~RL~-i~~llp-~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~~yfNsGVm  158 (246)
T cd00505          81 IVTLTKLH-LPNLVP-DYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREGKYYRQKRSHLAGPDYFNSGVF  158 (246)
T ss_pred             cceeHHHH-HHHHhh-ccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhccchhhcccCCCCCCCceeeeeE
Confidence            34555644 445567 77 4999999999999988777533   3344444543100          0011246899999


Q ss_pred             EEeeCHHH-HHHHHHHHHHHh---cCCCCCchHHHHHHHcCCCCCCCceEEEEcccccc--CCccccc-----CCCCceE
Q 017033          233 YVKSNNRT-IEFYKFWYNSRK---MFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYI--AGFCQVS-----QDFNAVC  301 (378)
Q Consensus       233 yvRst~rt-i~f~~~W~~~r~---~~p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~F--~Gfcq~~-----kd~~~~~  301 (378)
                      .+..+.-. ..+++.......   ......||+++|.++..     .+.++..||..+=  .+.+...     +...++.
T Consensus       159 linl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~-----~~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~~  233 (246)
T cd00505         159 VVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQ-----VPFIVKSLPCIWNVRLTGCYRSLNCFKAFVKNAK  233 (246)
T ss_pred             EEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhc-----CCCeEEECCCeeeEEecCccccccchhhhcCCCE
Confidence            99988874 444444333221   12467899999999843     2366788887531  2222221     2346789


Q ss_pred             EEEecc
Q 017033          302 TMHANC  307 (378)
Q Consensus       302 tvHaNc  307 (378)
                      ++|-+.
T Consensus       234 iiHy~g  239 (246)
T cd00505         234 VIHFNG  239 (246)
T ss_pred             EEEeCC
Confidence            999664

Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.

>PLN00176 galactinol synthase

Probab=97.45  E-value=0.0018  Score=64.94  Aligned_cols=225  Identities=16%  Similarity=0.163  Sum_probs=122.6

Q ss_pred             CCeEEEEE--ecccccCCCchHHHHHHHhhhccCCccccCcEEEEEcC---hHHHHHhHhcCCcEEEecCCCCCCCcchh
Q 017033           84 DNTVIITT--LNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALD---SKALDHCLSTHPHCYALNTSGLDFSGKEA  158 (378)
Q Consensus        84 d~tVIvT~--~N~a~a~p~s~lDlfLes~r~g~~t~~l~~~llVvAlD---~~a~~~c~~~g~~cy~~~~~~~d~~~~~~  158 (378)
                      .+...||+  +|..|. +|. + ....|++.. ++   -..++|+..+   ++..+++++.|......+  .........
T Consensus        21 ~~~AyVT~L~~n~~Y~-~Ga-~-vL~~SLr~~-~s---~~~lVvlVt~dVp~e~r~~L~~~g~~V~~V~--~i~~~~~~~   91 (333)
T PLN00176         21 AKRAYVTFLAGNGDYV-KGV-V-GLAKGLRKV-KS---AYPLVVAVLPDVPEEHRRILVSQGCIVREIE--PVYPPENQT   91 (333)
T ss_pred             CceEEEEEEecCcchH-HHH-H-HHHHHHHHh-CC---CCCEEEEECCCCCHHHHHHHHHcCCEEEEec--ccCCccccc
Confidence            46777773  577885 232 2 255677642 22   2345555544   355666776664443322  221111122


Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCCCC-cEEEeccCCCCC-----------------
Q 017033          159 YFMTSSYLEMMWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPDA-DFQIACDRFSGN-----------------  219 (378)
Q Consensus       159 ~f~s~~yl~m~w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~~a-Di~issD~~~g~-----------------  219 (378)
                      .|. ..+..+.|.|+++.. +.  .| .+|+.|+|++-++|--+.|.... -+....|++...                 
T Consensus        92 ~~~-~~~~~i~~tKl~iw~-l~--~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~  167 (333)
T PLN00176         92 QFA-MAYYVINYSKLRIWE-FV--EYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCP  167 (333)
T ss_pred             ccc-cchhhhhhhhhhhcc-cc--ccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccch
Confidence            332 235566788888554 33  36 59999999999999877775322 244444544210                 


Q ss_pred             -----CCC----CCCCCCceEEEEeeCHHHHHHHHHHHHHHhcCCCCCchHHHHHHHcCCCCCCCceEEEEcccccc-C-
Q 017033          220 -----SFN----LRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYI-A-  288 (378)
Q Consensus       220 -----~~d----~~~~~NtGf~yvRst~rti~f~~~W~~~r~~~p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~F-~-  288 (378)
                           +..    ....+|+|++.+.|+..+-+-+-+...... .-...||++||.++..        +++.||..|= - 
T Consensus       168 ~~~~wp~~~g~~~~~yFNSGVlvinps~~~~~~ll~~l~~~~-~~~f~DQD~LN~~F~~--------~~~~Lp~~YN~~~  238 (333)
T PLN00176        168 DKVTWPAELGPPPPLYFNAGMFVFEPSLSTYEDLLETLKITP-PTPFAEQDFLNMFFRD--------IYKPIPPVYNLVL  238 (333)
T ss_pred             hhccchhhccCCCCCeEEeEEEEEEcCHHHHHHHHHHHHhcC-CCCCCCHHHHHHHHcC--------cEEECCchhcCch
Confidence                 001    123689999999999887443333332111 1235899999999943        2456665431 1 


Q ss_pred             C-cccc--cCCCCceEEEEecccC-------C--hhhHHHHHHHHHH-HHHhhcc
Q 017033          289 G-FCQV--SQDFNAVCTMHANCCF-------G--LEAKITDLRLALE-DWRNFME  330 (378)
Q Consensus       289 G-fcq~--~kd~~~~~tvHaNc~~-------G--~~~K~~~Lr~vl~-dWk~y~~  330 (378)
                      + ++..  ..+..++.+||-....       |  ..-++.+.+.+++ -|..|-.
T Consensus       239 ~~~~~~~~~~~~~~vkIIHY~~~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~  293 (333)
T PLN00176        239 AMLWRHPENVELDKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWWDIYND  293 (333)
T ss_pred             hhhhhChhhcccCCcEEEEeeCCCCCCCCCCCcccCCChHHHHHHHHHHHHHhcc
Confidence            1 1111  1124577888874211       1  1234567777775 5555543

>PLN03181 glycosyltransferase; Provisional

Probab=97.44  E-value=0.015  Score=59.59  Aligned_cols=144  Identities=15%  Similarity=0.276  Sum_probs=91.4

Q ss_pred             HHHhHhcCCcEEEecCCCCCCCcchhccccHHHHHHHHHHHHHHHHHHHcC---CcEEEeeccEEeccCccccc----CC
Q 017033          133 LDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMG---YNFVFTDADIVWLQNPFQRF----DP  205 (378)
Q Consensus       133 ~~~c~~~g~~cy~~~~~~~d~~~~~~~f~s~~yl~m~w~K~~~l~~vL~lG---y~vLftDvDVVWlRnPfp~~----~~  205 (378)
                      .++|+..|..+|.....   +..        . ....|.|+-+++.++..=   -=|.+.|.|.+.. ||-.-+    +.
T Consensus       158 ~dYArrHGY~lf~~~a~---Ld~--------~-~p~~WaKipalRaAM~a~PeAEWfWWLDsDALIM-Np~~sLPl~ry~  224 (453)
T PLN03181        158 VDYCRIHGYDIFYNNAL---LHP--------K-MNSYWAKLPVVRAAMLAHPEAEWIWWVDSDAVFT-DMDFKLPLHRYR  224 (453)
T ss_pred             HHHHHHhCCcEEEeccc---cCc--------c-CchhhhHHHHHHHHHHHCCCceEEEEecCCceee-cCCCCCCHhhcC
Confidence            47899999888755431   111        0 245899999999887652   2488999999876 552222    22


Q ss_pred             CCcEEEeccCCCCCCC--CCCCCCCceEEEEeeCHHHHHHHHHHHHHHhc-------------------CCCCCchHHHH
Q 017033          206 DADFQIACDRFSGNSF--NLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKM-------------------FPGLHDQDVLN  264 (378)
Q Consensus       206 ~aDi~issD~~~g~~~--d~~~~~NtGf~yvRst~rti~f~~~W~~~r~~-------------------~p~~~DQ~vfN  264 (378)
                      +..+++-  ++...-.  .--+.+|+|.|++|.+.-+.+|++.|..+-.+                   .+...||.+|-
T Consensus       225 ~~NLvvh--g~p~~vy~~qdw~GlN~GsFLIRNcqWSl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLv  302 (453)
T PLN03181        225 DHNLVVH--GWPKLIYEKRSWTALNAGVFLIRNCQWSLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALV  302 (453)
T ss_pred             Ccccccc--CCcccccccccccccceeeeEEecCHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHH
Confidence            2333321  1110000  11245899999999999999999999874221                   34678999998


Q ss_pred             HHHcCCCCCCCceEEEEccccccCCccc
Q 017033          265 EIKFDPYIQKIQVKIRFLDTKYIAGFCQ  292 (378)
Q Consensus       265 ~il~~~~~~~~gl~v~~Ld~~~F~Gfcq  292 (378)
                      .++-.+ -.+-+-+|.+=..-||-||+-
T Consensus       303 yll~~~-~~~w~~k~ylE~~yy~~GyW~  329 (453)
T PLN03181        303 YLLYKH-KEKWGDKIYLEGEYYFEGYWA  329 (453)
T ss_pred             HHHHhc-cchhccceeeecceeeeeeHH
Confidence            776321 234567777667777778753

>PLN03182 xyloglucan 6-xylosyltransferase; Provisional

Probab=97.40  E-value=0.0016  Score=66.51  Aligned_cols=161  Identities=14%  Similarity=0.189  Sum_probs=102.9

Q ss_pred             HHHhHhcCCcEEEecCCCCCCCcchhccccHHHHHHHHHHHHHHHHHHHcCC---cEEEeeccEEeccCccccc---CCC
Q 017033          133 LDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYLEMMWIRIRLLSDVLAMGY---NFVFTDADIVWLQNPFQRF---DPD  206 (378)
Q Consensus       133 ~~~c~~~g~~cy~~~~~~~d~~~~~~~f~s~~yl~m~w~K~~~l~~vL~lGy---~vLftDvDVVWlRnPfp~~---~~~  206 (378)
                      .++|+..|..++. ....  +.. +        ..-.|.|+-++++++...-   =|.+.|.|.+.+--+|..-   +.+
T Consensus       157 ~dYAr~HGY~~fy-n~~~--ld~-~--------~p~~WaKlpaLR~aM~~~PeaEWiWWLDsDALImNmsfelPlery~~  224 (429)
T PLN03182        157 IDYCRLHGIEIFY-NMAH--LDA-E--------MAGFWAKLPLLRKLMLAHPEVEWIWWMDSDALFTDMTFEIPLEKYEG  224 (429)
T ss_pred             HHHHHHhCCEEEe-ehhh--cCc-C--------CCcchhHHHHHHHHHHHCCCceEEEEecCCceeecCCCCCCHhHcCC
Confidence            3677777877665 3211  111 0        1235999999999987632   3788999998865433321   123


Q ss_pred             CcEEEeccCCCCCC--CCCCCCCCceEEEEeeCHHHHHHHHHHHHHHhc-------------------CCCCCchHHHHH
Q 017033          207 ADFQIACDRFSGNS--FNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKM-------------------FPGLHDQDVLNE  265 (378)
Q Consensus       207 aDi~issD~~~g~~--~d~~~~~NtGf~yvRst~rti~f~~~W~~~r~~-------------------~p~~~DQ~vfN~  265 (378)
                      .++++-  ++...-  ..-.+.+|+|.|++|.++-+++|++.|..+..+                   .+...||.+|-.
T Consensus       225 ~NlVih--g~~~~l~~~kdW~GLNtGsFLIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvy  302 (429)
T PLN03182        225 YNLVIH--GWDELVYDQKSWIGLNTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVY  302 (429)
T ss_pred             cCeeec--cchhhheeccccCccceeeEEEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHH
Confidence            334431  111110  001245899999999999999999999876541                   235789999998


Q ss_pred             HHcCCCCCCCceEEEEccccccCCcccc--------------c-CCCCceEEEEeccc
Q 017033          266 IKFDPYIQKIQVKIRFLDTKYIAGFCQV--------------S-QDFNAVCTMHANCC  308 (378)
Q Consensus       266 il~~~~~~~~gl~v~~Ld~~~F~Gfcq~--------------~-kd~~~~~tvHaNc~  308 (378)
                      ++..+ -.+-+-++.+-+..||-||+..              . .|-..|++.|-.-|
T Consensus       303 Ll~~~-~~~w~~kv~le~~y~l~Gyw~~iv~~yee~~~~~~~g~gd~rwPfvtHF~Gc  359 (429)
T PLN03182        303 LLLTQ-RERWGDKVYLENSYYLHGYWVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVGC  359 (429)
T ss_pred             HHHhc-chhhccceEEeecceeccccHHHHHHHHHHHHhcCCCCCCcccceeEeeccc
Confidence            88431 2345778888888889887631              1 23456788887655

>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family

Probab=97.04  E-value=0.003  Score=61.93  Aligned_cols=107  Identities=12%  Similarity=0.040  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCCC-CcEEEeccCCCCCCCCCCCCCCceEEEEeeCHHHHHHH-HH
Q 017033          170 WIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPD-ADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFY-KF  246 (378)
Q Consensus       170 w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~~-aDi~issD~~~g~~~d~~~~~NtGf~yvRst~rti~f~-~~  246 (378)
                      +.|+.+...   ..| .|||.|+|++-++|--+.|..+ ..-..+.+.        ....|+|+|.+.|+..+-.=+ +.
T Consensus        81 ~tKl~~~~l---~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap~~--------~~~FNSGvmvi~ps~~~~~~l~~~  149 (278)
T cd06914          81 LTKLRAFNQ---TEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPRA--------YWKFASHLMVIKPSKEAFKELMTE  149 (278)
T ss_pred             HHHHHhccc---cceeeEEEecCChhhhcChHHHhcCCcccceeeecC--------cceecceeEEEeCCHHHHHHHHHH
Confidence            567766555   357 5999999999999877777543 111112111        126899999999999885444 33


Q ss_pred             HHHHHhcCCCCCchHHHHHHHcCCCCCCCceEEEEccccccC
Q 017033          247 WYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYIA  288 (378)
Q Consensus       247 W~~~r~~~p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~F~  288 (378)
                      -........+..||+++|.++.. .......++.+||...++
T Consensus       150 ~~~~~~~~~~~~DQdiLN~~~~~-~~~~~~~~~~~Lp~~~y~  190 (278)
T cd06914         150 ILPAYLNKKNEYDMDLINEEFYN-SKQLFKPSVLVLPHRQYG  190 (278)
T ss_pred             HHHhcccCCCCCChHHHHHHHhC-CccccCcceEEcCccccc
Confidence            33322223357899999999943 323345668888887664

N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.

>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function

Probab=96.70  E-value=0.021  Score=56.72  Aligned_cols=148  Identities=15%  Similarity=0.212  Sum_probs=88.4

Q ss_pred             HHHHHHcCC-cEEEeeccEEeccCcccccCC--CC-c--EEEe-ccCC------C----CCCCCCCCCCCceEEEEeeCH
Q 017033          176 LSDVLAMGY-NFVFTDADIVWLQNPFQRFDP--DA-D--FQIA-CDRF------S----GNSFNLRNEPNGGFNYVKSNN  238 (378)
Q Consensus       176 l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~--~a-D--i~is-sD~~------~----g~~~d~~~~~NtGf~yvRst~  238 (378)
                      +-++|. -+ .||+.|+||+.++|.-+.+..  +. |  +... .|..      .    ..+.......|+|++++-=+.
T Consensus        90 ip~lLp-~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~~~~~~~~~~~~gFNSGVmLmNL~~  168 (304)
T cd06430          90 LPSLLP-DVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSGVMLMNLTR  168 (304)
T ss_pred             HHHHhh-hhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhhhhcccCcccccccccceeeeeHHH
Confidence            444555 33 799999999999987766543  21 1  2222 1221      1    111111124899999984332


Q ss_pred             HH------------HHHHHHHHHHHhcCC---CCCchHHHHHHHcCCCCCCCceEEEEccccc--cCCccccc-----CC
Q 017033          239 RT------------IEFYKFWYNSRKMFP---GLHDQDVLNEIKFDPYIQKIQVKIRFLDTKY--IAGFCQVS-----QD  296 (378)
Q Consensus       239 rt------------i~f~~~W~~~r~~~p---~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~--F~Gfcq~~-----kd  296 (378)
                      --            ..+-+.|.....++.   ...||++||.++.+     ..-++.+||..+  -+..|+++     ++
T Consensus       169 wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDiLN~v~~~-----~p~~~~~Lp~~wN~~~d~~~y~~~~~~~~  243 (304)
T cd06430         169 MRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHH-----NPEMLYVFPCHWNYRPDHCMYGSNCKAAE  243 (304)
T ss_pred             HHhhhcccccchhhhhHHHHHHHHHHhcccCCCCCCHHHHHHHHcC-----CCCeEEEcCccccCCccceeecccccccc
Confidence            11            223334444333333   36899999999943     233467777642  23556542     34


Q ss_pred             CCceEEEEecccCChhhHHHHHHHHHHHHHhhc
Q 017033          297 FNAVCTMHANCCFGLEAKITDLRLALEDWRNFM  329 (378)
Q Consensus       297 ~~~~~tvHaNc~~G~~~K~~~Lr~vl~dWk~y~  329 (378)
                      ...+-++|.|--.-++.|.-.+|.+-..-+.|.
T Consensus       244 ~~~~~~~H~n~~~~~~~~~~~f~~~~~~~~~~~  276 (304)
T cd06430         244 EEGVFILHGNRGVYHSDKQPAFRAVYEAIREYT  276 (304)
T ss_pred             cccceEEEcCCCCCCCccchHHHHHHHHHHhcc
Confidence            467889999966557899999999877666665

A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=96.64  E-value=0.0033  Score=58.05  Aligned_cols=132  Identities=18%  Similarity=0.183  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHHHHHHcCCc-EEEeeccEEeccCcccccCC---CCcEEEeccC-----CCCC-------CCCCCCCCCc
Q 017033          166 LEMMWIRIRLLSDVLAMGYN-FVFTDADIVWLQNPFQRFDP---DADFQIACDR-----FSGN-------SFNLRNEPNG  229 (378)
Q Consensus       166 l~m~w~K~~~l~~vL~lGy~-vLftDvDVVWlRnPfp~~~~---~aDi~issD~-----~~g~-------~~d~~~~~Nt  229 (378)
                      ..+++.|+.+- ++| ..|+ +||.|+|++-++|.-..|..   +.-+....|.     +...       ........|+
T Consensus        83 ~~~~~~rl~i~-~ll-~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~fNs  160 (250)
T PF01501_consen   83 SPATFARLFIP-DLL-PDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFPFSERKQPGNKPYFNS  160 (250)
T ss_dssp             GGGGGGGGGHH-HHS-TTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTSSEEECESTTTTSEEE
T ss_pred             cHHHHHHhhhH-HHH-hhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccchhhcccCcccccccC
Confidence            34455576444 444 5664 99999999999999877752   2223333330     0000       0122457899


Q ss_pred             eEEEEeeCHHHHHHHHHH-HHHHhcCC---CCCchHHHHHHHcCCCCCCCceEEEEcccccc--CCcc-----cccCCCC
Q 017033          230 GFNYVKSNNRTIEFYKFW-YNSRKMFP---GLHDQDVLNEIKFDPYIQKIQVKIRFLDTKYI--AGFC-----QVSQDFN  298 (378)
Q Consensus       230 Gf~yvRst~rti~f~~~W-~~~r~~~p---~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~F--~Gfc-----q~~kd~~  298 (378)
                      |++.+.++.-..+-+... ........   ...||++||.++..        +++.||..+-  .+.+     .......
T Consensus       161 Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~~--------~~~~L~~~~N~~~~~~~~~~~~~~~~~~  232 (250)
T PF01501_consen  161 GVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFYG--------NIKPLPCRYNCQPSWYNQSDDYFNPILE  232 (250)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHTT--------GEEEEEGGGSEEHHHHHHTHHHHHHHGC
T ss_pred             cEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhccc--------eeEEECchhccccccccccchhhHhhcC
Confidence            999999887776544433 33322232   46899999999942        3567776532  1222     1123346


Q ss_pred             ceEEEEecc
Q 017033          299 AVCTMHANC  307 (378)
Q Consensus       299 ~~~tvHaNc  307 (378)
                      ++.++|-..
T Consensus       233 ~~~iiHy~g  241 (250)
T PF01501_consen  233 DAKIIHYSG  241 (250)
T ss_dssp             C-SEEE--S
T ss_pred             CeEEEEeCC
Confidence            677888654

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....

>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis

Probab=96.08  E-value=0.033  Score=54.58  Aligned_cols=150  Identities=15%  Similarity=0.149  Sum_probs=79.3

Q ss_pred             HHHHHHHcCC-cEEEeeccEEeccCcccccCC-----CCcEEEec-cC---CCCC------C-CCCCCCCCceEEEEe--
Q 017033          175 LLSDVLAMGY-NFVFTDADIVWLQNPFQRFDP-----DADFQIAC-DR---FSGN------S-FNLRNEPNGGFNYVK--  235 (378)
Q Consensus       175 ~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~-----~aDi~iss-D~---~~g~------~-~d~~~~~NtGf~yvR--  235 (378)
                      ++-++|..-+ .||+.|+|+|...|.-+.+..     +.-+.... |.   +.+.      + ...+..+|+|++++-  
T Consensus        89 ~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~yFNsGVmlinL~  168 (280)
T cd06431          89 VLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILLDLD  168 (280)
T ss_pred             HHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhhhhhccCCCcccccceeeeeeeeeHH
Confidence            4566675445 699999999999999877643     11222222 21   1111      1 112347999999984  


Q ss_pred             ---eCHHHHHHHHHHHHHHh--cCCCCCchHHHHHHHcCCCCCCCceEEEEccccc-c-CCc-ccc---cCCCCceEEEE
Q 017033          236 ---SNNRTIEFYKFWYNSRK--MFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKY-I-AGF-CQV---SQDFNAVCTMH  304 (378)
Q Consensus       236 ---st~rti~f~~~W~~~r~--~~p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~-F-~Gf-cq~---~kd~~~~~tvH  304 (378)
                         ...-+.++...-.....  .....+||++||.++.+ .   .. .+..||..+ + .|. +..   -+....|.++|
T Consensus       169 ~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~-~---~~-~~~~L~~~wN~~~~~~~~~~~~~~~~~~p~IIH  243 (280)
T cd06431         169 KLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQ-N---PF-LVYQLPCAWNVQLSDHTRSEQCYRDVSDLKVIH  243 (280)
T ss_pred             HHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcC-C---cc-eeEECCCccccccCccchHhHhhcCcCCCEEEE
Confidence               33323332211111101  12357999999999943 1   01 134566542 1 121 111   01235689999


Q ss_pred             ecccCC--hhh-HHHHHHHHHHHHHhhccCC
Q 017033          305 ANCCFG--LEA-KITDLRLALEDWRNFMELP  332 (378)
Q Consensus       305 aNc~~G--~~~-K~~~Lr~vl~dWk~y~~~~  332 (378)
                      -+...-  ..+ +.+.+|+   .|++|...+
T Consensus       244 f~g~~KPW~~~~~~~~~~~---~~~~~~~~~  271 (280)
T cd06431         244 WNSPKKLRVKNKHVEFFRN---LYLTFLEYD  271 (280)
T ss_pred             eCCCCCCCCcCCCChHHHH---HHHHHHhcC
Confidence            775311  123 3477887   567776544

The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil

>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family

Probab=94.59  E-value=0.16  Score=48.76  Aligned_cols=125  Identities=18%  Similarity=0.140  Sum_probs=68.4

Q ss_pred             HHHHHHHHcCC-cEEEeeccEEeccCcccccCC---CCcEEEeccCCC-----CCC---------C-CCCCCCCceEEEE
Q 017033          174 RLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDP---DADFQIACDRFS-----GNS---------F-NLRNEPNGGFNYV  234 (378)
Q Consensus       174 ~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~---~aDi~issD~~~-----g~~---------~-d~~~~~NtGf~yv  234 (378)
                      .++..+|...+ .||+.|+|+|...|=-+.+.-   ++=+.+..|+-.     +..         . ......|+|++++
T Consensus        86 L~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~~~~~~~~~~~~~~~l~~~~YfNSGVmli  165 (248)
T cd06432          86 LFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEMDGFRFWKQGYWKSHLRGRPYHISALYVV  165 (248)
T ss_pred             HHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhcccchhhhhhhhhhhcCCCCccceeeEEE
Confidence            44444887766 699999999998765454432   221122223211     000         0 1123689999997


Q ss_pred             -----eeCHHHHHHHHHHHHHHhcCC---CCCchHHHHHHHcCCCCCCCceEEEEccccc--cCCcccccCCCCceEEEE
Q 017033          235 -----KSNNRTIEFYKFWYNSRKMFP---GLHDQDVLNEIKFDPYIQKIQVKIRFLDTKY--IAGFCQVSQDFNAVCTMH  304 (378)
Q Consensus       235 -----Rst~rti~f~~~W~~~r~~~p---~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~--F~Gfcq~~kd~~~~~tvH  304 (378)
                           |...-+-++.+. ++.....+   ..+||+++|.++..       .++..||..+  +-++|-..+ ..++-|+|
T Consensus       166 NL~~wR~~~i~~~~~~~-~~~l~~~~~~l~~~DQDiLN~v~~~-------~~i~~Lp~~w~~~~~~~~~~~-~~~~~~~~  236 (248)
T cd06432         166 DLKRFRRIAAGDRLRGQ-YQQLSQDPNSLANLDQDLPNNMQHQ-------VPIFSLPQEWLWCETWCSDES-KKKAKTID  236 (248)
T ss_pred             eHHHHHHHhHHHHHHHH-HHHHhcCCCccccCCchhhHHHhcc-------CCeEECChHHHHHHHHhcccc-cCccceee
Confidence                 554444333322 22122222   35799999999932       2378888874  225555433 34455666


Q ss_pred             ecc
Q 017033          305 ANC  307 (378)
Q Consensus       305 aNc  307 (378)
                      --|
T Consensus       237 ~~~  239 (248)
T cd06432         237 LCN  239 (248)
T ss_pred             ccc
Confidence            544

C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.

>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional

Probab=94.08  E-value=0.76  Score=46.11  Aligned_cols=107  Identities=21%  Similarity=0.242  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCCCC--c-EEEe-ccCCC----------CCCCCCCCCCCceEEE
Q 017033          169 MWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPDA--D-FQIA-CDRFS----------GNSFNLRNEPNGGFNY  233 (378)
Q Consensus       169 ~w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~~a--D-i~is-sD~~~----------g~~~d~~~~~NtGf~y  233 (378)
                      +.-|+ ++-++|...+ .||+.|+|||-.+|--+.+.-+-  + +... .|...          +.+.......|+|+++
T Consensus       107 tY~Rl-~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~~~~~~~~~l~~~~~~~~YFNsGVll  185 (334)
T PRK15171        107 TYFRF-IIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAEWWSKRAQSLQTPGLASGYFNSGFLL  185 (334)
T ss_pred             HHHHH-HHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchhHHHHHHHhcCCccccccceecceEE
Confidence            33353 3445554345 59999999999998877775432  2 2222 23211          1111112468999999


Q ss_pred             Ee-----eCHHHHHHHHHHHHHHh--cCCCCCchHHHHHHHcCCCCCCCceEEEEcccc
Q 017033          234 VK-----SNNRTIEFYKFWYNSRK--MFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTK  285 (378)
Q Consensus       234 vR-----st~rti~f~~~W~~~r~--~~p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~  285 (378)
                      +-     -..-+.++++. .....  ..-...||++||.++..        ++..||..
T Consensus       186 iNl~~wRe~~i~~k~~~~-l~~~~~~~~~~~~DQDiLN~~~~~--------~~~~L~~~  235 (334)
T PRK15171        186 INIPAWAQENISAKAIEM-LADPEIVSRITHLDQDVLNILLAG--------KVKFIDAK  235 (334)
T ss_pred             EcHHHHHHhhHHHHHHHH-HhccccccceeecChhHHHHHHcC--------CeEECCHh
Confidence            83     33333444432 11110  01135799999999943        46777764

>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function

Probab=93.80  E-value=0.37  Score=45.56  Aligned_cols=95  Identities=26%  Similarity=0.303  Sum_probs=71.2

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEeeccEEeccCccccc----CCCCcEEEeccCCCCCCCCCCCCCCceEEEEeeCHHHH
Q 017033          166 LEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRF----DPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTI  241 (378)
Q Consensus       166 l~m~w~K~~~l~~vL~lGy~vLftDvDVVWlRnPfp~~----~~~aDi~issD~~~g~~~d~~~~~NtGf~yvRst~rti  241 (378)
                      ...+.+|--++..+|..==-|||.|+||.- -||-..+    .+..|+.+- |.+.      ...+.+|-|.+|.|+.++
T Consensus        25 kd~fFrRHCvva~~L~~~~~vlflDaDigV-vNp~~~iEefid~~~Di~fy-dR~~------n~Ei~agsYlvkNT~~~~   96 (222)
T PF03314_consen   25 KDKFFRRHCVVAKILPEYDWVLFLDADIGV-VNPNRRIEEFIDEGYDIIFY-DRFF------NWEIAAGSYLVKNTEYSR   96 (222)
T ss_pred             hhHHHHHHHHHHHHhccCCEEEEEcCCcee-ecCcccHHHhcCCCCcEEEE-eccc------chhhhhccceeeCCHHHH
Confidence            456788999999999865569999999965 4786554    567898876 3332      124789999999999999


Q ss_pred             HHHHHHHHHHhcCCC---CCchHHHHHHHc
Q 017033          242 EFYKFWYNSRKMFPG---LHDQDVLNEIKF  268 (378)
Q Consensus       242 ~f~~~W~~~r~~~p~---~~DQ~vfN~il~  268 (378)
                      +|++.|...-.+-|.   ..|-.++...+.
T Consensus        97 ~fl~~~a~~E~~lP~sfhGtDNGAlH~~L~  126 (222)
T PF03314_consen   97 DFLKEWADYEFKLPNSFHGTDNGALHIFLA  126 (222)
T ss_pred             HHHHHHhhhCccCCCccccCccHHHHHHHH
Confidence            999999876545453   357777766653

>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]

Probab=93.24  E-value=0.97  Score=45.46  Aligned_cols=172  Identities=19%  Similarity=0.163  Sum_probs=94.4

Q ss_pred             EEEEecccccCCCchHHHHHHHhhhccCCccccCcEEEEEcChHHHHHhHhcC--CcEEEecCCCCCCCcchhcc--ccH
Q 017033           88 IITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALDSKALDHCLSTH--PHCYALNTSGLDFSGKEAYF--MTS  163 (378)
Q Consensus        88 IvT~~N~a~a~p~s~lDlfLes~r~g~~t~~l~~~llVvAlD~~a~~~c~~~g--~~cy~~~~~~~d~~~~~~~f--~s~  163 (378)
                      |+-.++.+|+.|.+   .-+-|.........+-=|.++.-.+++-.+++++.-  ..++..-. -.|.+. -..+  -++
T Consensus         5 Iv~a~D~nY~~~~g---vsI~SiL~~n~~~~~~fhil~~~i~~e~~~~l~~~~~~f~~~i~~~-~id~~~-~~~~~~~~~   79 (325)
T COG1442           5 IAFAFDKNYLIPAG---VSIYSLLEHNRKIFYKFHILVDGLNEEDKKKLNETAEPFKSFIVLE-VIDIEP-FLDYPPFTK   79 (325)
T ss_pred             EEEEcccccchhHH---HHHHHHHHhCccccEEEEEEecCCCHHHHHHHHHHHHhhccceeeE-EEechh-hhccccccc
Confidence            66677889986532   123344321111133446677778888888887752  11211100 001111 1122  356


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEeeccEEeccCcccccCC---CCcEEEeccCCCC----------CCCCCCCCCCce
Q 017033          164 SYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDP---DADFQIACDRFSG----------NSFNLRNEPNGG  230 (378)
Q Consensus       164 ~yl~m~w~K~~~l~~vL~lGy~vLftDvDVVWlRnPfp~~~~---~aDi~issD~~~g----------~~~d~~~~~NtG  230 (378)
                      .|..|+..|. ++-+++...=.+|+.|+|||..++=-..|.-   +.=+.+..|.+..          .....+...|+|
T Consensus        80 ~~s~~v~~R~-fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~~~~~~~~~~~~~~~~~yFNaG  158 (325)
T COG1442          80 RFSKMVLVRY-FLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYMKEGALRLEKGDLEGSYFNAG  158 (325)
T ss_pred             chHHHHHHHH-HHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhhhhhhhhHhhhcccccccCccc
Confidence            6777887775 4556666667799999999999986555432   2223334444321          122345569999


Q ss_pred             EEEE-----e---eCHHHHHHHHHHHHHHhcCCCCCchHHHHHHHcC
Q 017033          231 FNYV-----K---SNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFD  269 (378)
Q Consensus       231 f~yv-----R---st~rti~f~~~W~~~r~~~p~~~DQ~vfN~il~~  269 (378)
                      ++++     |   .+++.++++..+-    ..-...||+++|.++.+
T Consensus       159 ~llinl~~W~~~~i~~k~i~~~~~~~----~~~~~~DQdiLN~i~~~  201 (325)
T COG1442         159 VLLINLKLWREENIFEKLIELLKDKE----NDLLYPDQDILNMIFED  201 (325)
T ss_pred             eeeehHHHHHHhhhHHHHHHHHhccc----cccCCccccHHHHHHHh
Confidence            9997     2   2233333332211    12235789999999954

>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function

Probab=92.02  E-value=0.68  Score=44.88  Aligned_cols=103  Identities=20%  Similarity=0.236  Sum_probs=61.1

Q ss_pred             cEEEeeccEEeccCcccccCCC---CcEEEeccCCCCCCCCCCCCCCceEEEE-----eeCHHHHHHHHHHHHHHh----
Q 017033          185 NFVFTDADIVWLQNPFQRFDPD---ADFQIACDRFSGNSFNLRNEPNGGFNYV-----KSNNRTIEFYKFWYNSRK----  252 (378)
Q Consensus       185 ~vLftDvDVVWlRnPfp~~~~~---aDi~issD~~~g~~~d~~~~~NtGf~yv-----Rst~rti~f~~~W~~~r~----  252 (378)
                      .+|+.|+|+|-.+|=-+.+..+   .-+....|           ..|+|++++     |..+-+.++++ |+....    
T Consensus       116 kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d-----------yfNsGV~linl~~wr~~~i~~~~~~-~~~~~~~~~~  183 (257)
T cd06429         116 KVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET-----------SWNPGVNVVNLTEWRRQNVTETYEK-WMELNQEEEV  183 (257)
T ss_pred             eEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh-----------hcccceEEEeHHHHHhccHHHHHHH-HHHHhhhccc
Confidence            6999999999999877776443   11222222           579999997     44444444443 333221    


Q ss_pred             cCCCCCchHHHHHHHcCCCCCCCceEEEEccccc--cC-Ccccc--cCCCCceEEEEecc
Q 017033          253 MFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKY--IA-GFCQV--SQDFNAVCTMHANC  307 (378)
Q Consensus       253 ~~p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~--F~-Gfcq~--~kd~~~~~tvHaNc  307 (378)
                      ......||+++|.++..        ++..||..+  ++ |+-..  ......+.++|-+-
T Consensus       184 ~~~~~~dqd~ln~~~~~--------~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G  235 (257)
T cd06429         184 TLWKLITLPPGLIVFYG--------LTSPLDPSWHVRGLGYNYGIRPQDIKAAAVLHFNG  235 (257)
T ss_pred             chhhcCCccHHHHHccC--------eeEECChHHcccCCcccccccccccCCcEEEEECC
Confidence            22455789999998832        356666541  22 22211  12345678999774

A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.

>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase

Probab=85.38  E-value=3.9  Score=44.43  Aligned_cols=159  Identities=18%  Similarity=0.189  Sum_probs=90.0

Q ss_pred             hhccccHHHHHH-HHHHHHHHHHHHHcCCcEEEeeccEEeccCcccccCCC---CcEEEeccCCC-----------CCCC
Q 017033          157 EAYFMTSSYLEM-MWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPD---ADFQIACDRFS-----------GNSF  221 (378)
Q Consensus       157 ~~~f~s~~yl~m-~w~K~~~l~~vL~lGy~vLftDvDVVWlRnPfp~~~~~---aDi~issD~~~-----------g~~~  221 (378)
                      ...|-.+.|+.+ +..|+. +-++|..=-.||+.|+|||-.+|--+.+.-+   .-+.+..|+..           .++.
T Consensus       449 ~~k~r~p~ylS~lnY~Rf~-LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~f~r~~~ylnfs~P~  527 (657)
T PLN02910        449 NLKYRNPKYLSMLNHLRFY-LPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKESFHRFDKYLNFSNPK  527 (657)
T ss_pred             ccccCCcchhhHHHHHHHH-HHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchhhhhhhhhhccCChh
Confidence            345556677655 445654 4445552226999999999999987766432   22222333321           1111


Q ss_pred             ------CCCCCCCceEEEE-----eeCHHHHHHHHHHHHHHhcCCCCCchHHHHH---HHcCCCCCCCceEEEEccccc-
Q 017033          222 ------NLRNEPNGGFNYV-----KSNNRTIEFYKFWYNSRKMFPGLHDQDVLNE---IKFDPYIQKIQVKIRFLDTKY-  286 (378)
Q Consensus       222 ------d~~~~~NtGf~yv-----Rst~rti~f~~~W~~~r~~~p~~~DQ~vfN~---il~~~~~~~~gl~v~~Ld~~~-  286 (378)
                            .-.-..|+|++++     |-.+-|. .+..|... ......+||+++|-   ++ ++       ++..||... 
T Consensus       528 i~~yFNs~aCyfNsGVmVIDL~~WRe~nITe-~ye~w~el-n~~~~L~dqgsLPpgLLvF-~g-------~i~pLD~rWN  597 (657)
T PLN02910        528 ISENFDPNACGWAFGMNMFDLKEWRKRNITG-IYHYWQDL-NEDRTLWKLGSLPPGLITF-YN-------LTYPLDRSWH  597 (657)
T ss_pred             hhhccCCCCceeecccEEEeHHHHHHhhHHH-HHHHHHHh-cccccccccCCCChHHHHH-hC-------ceeecCchhe
Confidence                  0112356799997     5555555 88888874 34457899999994   33 22       245666552 


Q ss_pred             -cC-Ccc--cccCCCCceEEEEecccCCh---hhHHHHHHHHHHHHHhhcc
Q 017033          287 -IA-GFC--QVSQDFNAVCTMHANCCFGL---EAKITDLRLALEDWRNFME  330 (378)
Q Consensus       287 -F~-Gfc--q~~kd~~~~~tvHaNc~~G~---~~K~~~Lr~vl~dWk~y~~  330 (378)
                       .| |+-  ........+.++|-|.. ++   +..++..|.   .|.+|..
T Consensus       598 v~GLGyd~~v~~~~i~~AAVLHynG~-~KPWl~l~i~~Yr~---~W~kYl~  644 (657)
T PLN02910        598 VLGLGYDPALNQTEIENAAVVHYNGN-YKPWLDLAIAKYKP---YWSRYVQ  644 (657)
T ss_pred             ecCCCCCcccccccccCcEEEEeCCC-CCcccccCcccchH---HHHHHcc
Confidence             23 321  11245667899997743 22   233344555   7888865

>PLN02829 Probable galacturonosyltransferase

Probab=84.53  E-value=4.3  Score=44.09  Aligned_cols=158  Identities=18%  Similarity=0.197  Sum_probs=88.3

Q ss_pred             hccccHHHHHH-HHHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCCC---CcEEEeccCCC-----------CCC-
Q 017033          158 AYFMTSSYLEM-MWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPD---ADFQIACDRFS-----------GNS-  220 (378)
Q Consensus       158 ~~f~s~~yl~m-~w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~~---aDi~issD~~~-----------g~~-  220 (378)
                      ..|..+.|..+ +..|+. +-+++. .+ .||+.|.|||-.+|--+.+.-+   .-+....|+..           .++ 
T Consensus       432 ~k~r~p~ylS~lnY~Rfy-LPeLLP-~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~  509 (639)
T PLN02829        432 LKYRNPKYLSILNHLRFY-LPEIFP-KLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPL  509 (639)
T ss_pred             cccCCcchhhHHHHHHHH-HHHHhc-ccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhhhhhhhhhhhccchH
Confidence            34555666443 444544 444555 34 6999999999999887776432   21222333311           011 


Q ss_pred             -----CCCCCCCCceEEEE-----eeCHHHHHHHHHHHHHHhcCCCCCchHHHHHHH--cCCCCCCCceEEEEccccc--
Q 017033          221 -----FNLRNEPNGGFNYV-----KSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIK--FDPYIQKIQVKIRFLDTKY--  286 (378)
Q Consensus       221 -----~d~~~~~NtGf~yv-----Rst~rti~f~~~W~~~r~~~p~~~DQ~vfN~il--~~~~~~~~gl~v~~Ld~~~--  286 (378)
                           .......|+|++++     |-.+-|..+. .|+.. ......|||+++|-++  .++       +++.||...  
T Consensus       510 i~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~-~wm~~-n~~r~L~dlgaLPp~Ll~F~g-------~i~~LD~rWNv  580 (639)
T PLN02829        510 ISKNFDPHACGWAYGMNVFDLDEWKRQNITEVYH-SWQKL-NHDRQLWKLGTLPPGLITFWK-------RTYPLDRSWHV  580 (639)
T ss_pred             hhhccCCcccceecceEEEeHHHHHHhChHHHHH-HHHHH-ccCCccccccCCChHHHHhcC-------ceEecChhhee
Confidence                 01122478999997     6566665555 77753 2334679999999764  121       256666652  


Q ss_pred             cC-Cccc--ccCCCCceEEEEecccCChh---hHHHHHHHHHHHHHhhcc
Q 017033          287 IA-GFCQ--VSQDFNAVCTMHANCCFGLE---AKITDLRLALEDWRNFME  330 (378)
Q Consensus       287 F~-Gfcq--~~kd~~~~~tvHaNc~~G~~---~K~~~Lr~vl~dWk~y~~  330 (378)
                      +| |+-.  ..++...+.++|-|.. ++.   ..++.+|.   .|.+|..
T Consensus       581 ~GLGy~~~v~~~~i~~aaIIHynG~-~KPWle~~i~~yr~---lW~kYl~  626 (639)
T PLN02829        581 LGLGYNPNVNQRDIERAAVIHYNGN-MKPWLEIGIPKYRN---YWSKYVD  626 (639)
T ss_pred             cCCCCCcccchhcccCCeEEEECCC-CCccccCCcccchH---HHHHHHh
Confidence            23 3311  1245667789997742 222   22344555   6888855

>PLN02867 Probable galacturonosyltransferase

Probab=82.43  E-value=4.3  Score=43.37  Aligned_cols=159  Identities=17%  Similarity=0.228  Sum_probs=84.6

Q ss_pred             ccccHHHHHH-HHHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCCC---CcEEEeccCC--------------C--
Q 017033          159 YFMTSSYLEM-MWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPD---ADFQIACDRF--------------S--  217 (378)
Q Consensus       159 ~f~s~~yl~m-~w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~~---aDi~issD~~--------------~--  217 (378)
                      .+.++.|+.+ +..|+.+- ++|. -+ .||+.|.|||-.+|--+.+.-|   .=+..-.|.+              .  
T Consensus       321 ~~~~pkylS~lnYlRflIP-eLLP-~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNf  398 (535)
T PLN02867        321 EALSPSCLSLLNHLRIYIP-ELFP-DLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNF  398 (535)
T ss_pred             hhcChhhhhHHHHHHHHHH-HHhh-ccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhccc
Confidence            3466777765 45665544 4444 23 6999999999999877776432   1111111211              0  


Q ss_pred             CCCC------CCCCCCCceEEEE-----eeCHHHHHHHHHHHHHH-hcCCCCCchHHHHHHH--cCCCCCCCceEEEEcc
Q 017033          218 GNSF------NLRNEPNGGFNYV-----KSNNRTIEFYKFWYNSR-KMFPGLHDQDVLNEIK--FDPYIQKIQVKIRFLD  283 (378)
Q Consensus       218 g~~~------d~~~~~NtGf~yv-----Rst~rti~f~~~W~~~r-~~~p~~~DQ~vfN~il--~~~~~~~~gl~v~~Ld  283 (378)
                      ++|.      ......|+|++++     |-.+-|-++ ..|+..- ......+||+++|..+  -+       =++..||
T Consensus       399 snp~i~~~~~p~~cYFNSGVmLINL~~WRe~nITek~-~~~Le~n~~~~~~l~dqd~LN~~LlvF~-------g~v~~LD  470 (535)
T PLN02867        399 SHPLISSNLDQERCAWLYGMNVFDLKAWRRTNITEAY-HKWLKLSLNSGLQLWQPGALPPALLAFK-------GHVHPID  470 (535)
T ss_pred             cchhhhccCCCCCcceecceeeeeHHHHHHhcHHHHH-HHHHHhchhcccccccccccchHHHHhc-------CcEEECC
Confidence            0110      0112478999997     444444433 3444422 1123578999999732  12       1356776


Q ss_pred             ccc--cC-Ccccc---cCCCCceEEEEecccC--ChhhHHHHHHHHHHHHHhhcc
Q 017033          284 TKY--IA-GFCQV---SQDFNAVCTMHANCCF--GLEAKITDLRLALEDWRNFME  330 (378)
Q Consensus       284 ~~~--F~-Gfcq~---~kd~~~~~tvHaNc~~--G~~~K~~~Lr~vl~dWk~y~~  330 (378)
                      ..+  +| |+...   .+....+.++|-|-..  =++.-++++|+   .|.+|..
T Consensus       471 ~rWNv~gLgy~~~~~~~~~i~~paIIHYnG~~KPW~e~~~~~yR~---~W~kyl~  522 (535)
T PLN02867        471 PSWHVAGLGSRPPEVPREILESAAVLHFSGPAKPWLEIGFPEVRS---LWYRHVN  522 (535)
T ss_pred             hhhcccCCCcccccchhhhcCCcEEEEECCCCCcccccCCCchhH---HHHHhcC
Confidence            642  23 33211   1224678999987421  01223345666   7888843

>PLN02718 Probable galacturonosyltransferase

Probab=80.88  E-value=8.4  Score=41.81  Aligned_cols=148  Identities=15%  Similarity=0.180  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHcCCcEEEeeccEEeccCcccccCCC---CcEEEeccCCCC--------------CCC-----C-CCC
Q 017033          169 MWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPD---ADFQIACDRFSG--------------NSF-----N-LRN  225 (378)
Q Consensus       169 ~w~K~~~l~~vL~lGy~vLftDvDVVWlRnPfp~~~~~---aDi~issD~~~g--------------~~~-----d-~~~  225 (378)
                      +..|+.+-. ++..=-.||+.|+|||-.+|--+.+.-+   .-+.+..|+..+              ++.     + ...
T Consensus       405 ~y~Rl~ipe-llp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~lnfs~p~i~~~fn~~~C  483 (603)
T PLN02718        405 NHARFYLPD-IFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTFINFSDPWVAKKFDPKAC  483 (603)
T ss_pred             HHHHHHHHH-HhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhhhhccchhhhcccCCCcc
Confidence            444654433 4442127999999999999987776432   212223343221              000     0 012


Q ss_pred             CCCceEEEE-----eeCHHHHHHHHHHHHHHhcCCCCCchHHHH---HHHcCCCCCCCceEEEEccccc--cC-Cccc--
Q 017033          226 EPNGGFNYV-----KSNNRTIEFYKFWYNSRKMFPGLHDQDVLN---EIKFDPYIQKIQVKIRFLDTKY--IA-GFCQ--  292 (378)
Q Consensus       226 ~~NtGf~yv-----Rst~rti~f~~~W~~~r~~~p~~~DQ~vfN---~il~~~~~~~~gl~v~~Ld~~~--F~-Gfcq--  292 (378)
                      ..|+|++.+     |-.+-|.. +..|+... .....+||+++|   .++..        ++..||...  .+ |+..  
T Consensus       484 yfNsGVlLIDLk~WReenITe~-~~~~l~~n-~~~~l~dqdaLpp~LlvF~g--------ri~~LD~rWNv~gLG~~~~i  553 (603)
T PLN02718        484 TWAFGMNLFDLEEWRRQKLTSV-YHKYLQLG-VKRPLWKAGSLPIGWLTFYN--------QTVALDKRWHVLGLGHESGV  553 (603)
T ss_pred             ccccceEEEeHHHHHhcChHHH-HHHHHHhc-cCccccCcccccHHHHHhcC--------ceeecChHHhccCccccccc
Confidence            367999986     55555554 44566532 223578999987   45422        256676652  33 3321  


Q ss_pred             ccCCCCceEEEEecccC--ChhhHHHHHHHHHHHHHhhcc
Q 017033          293 VSQDFNAVCTMHANCCF--GLEAKITDLRLALEDWRNFME  330 (378)
Q Consensus       293 ~~kd~~~~~tvHaNc~~--G~~~K~~~Lr~vl~dWk~y~~  330 (378)
                      ...+...+.++|-|...  =++.-+.+.|.   -|++|..
T Consensus       554 ~~~~i~~aaIIHYnG~~KPWle~~i~~yr~---~W~k~v~  590 (603)
T PLN02718        554 GASDIEQAAVIHYDGVMKPWLDIGIGKYKR---YWNIHVP  590 (603)
T ss_pred             cccccCCCEEEEECCCCCccccCChhhHHH---HHHhhcC
Confidence            12356678999977421  01333456666   6998865

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	378
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 6e-05
 Identities = 56/335 (16%), Positives = 101/335 (30%), Gaps = 117/335 (34%)

Query: 55  YDVIAPSMKAQKSSNDPSLEKIL---KRAAM-GDNTVI----------ITTLNQAWAEPN 100
           Y  +   +K +     PS+   +   +R  +  DN V              L QA  E  
Sbjct: 91  YKFLMSPIKTE--QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELR 148

Query: 101 SIFDIFLESFRTG-NGTGKLLDHLVVVALDSKALDHCLSTHPHCYALNTSGLDFSGKEAY 159
              ++ ++    G  G+GK       VALD      CLS    C       +DF      
Sbjct: 149 PAKNVLID----GVLGSGK-----TWVALDV-----CLSYKVQC------KMDF------ 182

Query: 160 FMTSSYLEMMWIRIRLLSDVLAMGYNFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGN 219
                  ++ W+ ++  +            +  +  LQ    + DP+  +    D     
Sbjct: 183 -------KIFWLNLKNCNS----------PETVLEMLQKLLYQIDPN--WTSRSDH---- 219

Query: 220 SFNLRNEPNGGFNYVKSNNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKI 279
           S N++       + +++  R +   K + N       L    VL  ++            
Sbjct: 220 SSNIKLR----IHSIQAELRRLLKSKPYENC------L---LVLLNVQ------------ 254

Query: 280 RFLDTKYIAGF---CQVSQDFNAVCTMHANCCFGLEAKITDLRLALEDWRNFMELPPDQK 336
              + K    F   C++      + T        L A  T   ++L+     +  P + K
Sbjct: 255 ---NAKAWNAFNLSCKI-----LLTTRFKQVTDFLSAATTT-HISLDHHSMTLT-PDEVK 304

Query: 337 SLPRSWTVPKKCRETPFHPPDESPNSLPPAAPKIS 371
           SL   +              D  P  LP      +
Sbjct: 305 SLLLKYL-------------DCRPQDLPREVLTTN 326

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	378
1ll2_A	333	Glycogenin-1; protein-substrate complex, beta-alph	97.79
3u2u_A	263	Glycogenin-1, GN-1, GN1; structural genomics, stru	97.38
1g9r_A	311	Glycosyl transferase; alpha-beta structure; HET: U	96.6
3tzt_A	276	Glycosyl transferase family 8; structural genomics	96.54

>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*

Probab=97.79  E-value=0.00017  Score=70.60  Aligned_cols=165  Identities=19%  Similarity=0.156  Sum_probs=91.0

Q ss_pred             CeEEEE-EecccccCCCchHHHHHHHhhhccCCccccCcEEEEEcC---hHHHHHhHhcCCcEEEecCCCCCCCcchhcc
Q 017033           85 NTVIIT-TLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALD---SKALDHCLSTHPHCYALNTSGLDFSGKEAYF  160 (378)
Q Consensus        85 ~tVIvT-~~N~a~a~p~s~lDlfLes~r~g~~t~~l~~~llVvAlD---~~a~~~c~~~g~~cy~~~~~~~d~~~~~~~f  160 (378)
                      +...|| ++|..|.. +  +-..+.|++.. ++   -..++|+..|   ++..+.+++.+.....+..-...... ....
T Consensus         3 ~~a~vt~~~d~~Yl~-~--a~vl~~SL~~~-~s---~~~l~vlv~~~is~~~~~~L~~~~~~v~~v~~l~~~~~~-~~~~   74 (333)
T 1ll2_A            3 DQAFVTLTTNDAYAK-G--ALVLGSSLKQH-RT---SRRLAVLTTPQVSDTMRKALEIVFDEVITVDILDSGDSA-HLTL   74 (333)
T ss_dssp             SEEEEEEESSHHHHH-H--HHHHHHHHHHT-TC---CSEEEEEECTTSCHHHHHHHHHHCSEEEECCTTSTTSTT-HHHH
T ss_pred             ceEEEEEEeCHHHHH-H--HHHHHHHHHHh-CC---CCCEEEEEcCCCCHHHHHHHHHhCCEEEEEeecCCcchh-hccc
Confidence            334444 46888851 1  12356677542 12   1345555443   56677777777555444321111111 1111


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCCCCcEEEeccCCCCCCCCCCCCCCceEEEEeeCHH
Q 017033          161 MTSSYLEMMWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNR  239 (378)
Q Consensus       161 ~s~~yl~m~w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~~aDi~issD~~~g~~~d~~~~~NtGf~yvRst~r  239 (378)
                      ..+.+...++.|+.+.. +  ..| .||+.|+|++.++|+-+.|..+ .+....|.  |    .....|+|++.++++..
T Consensus        75 ~~~~~~~~t~~Kl~i~~-l--~~ydrvlYLDaD~lv~~di~eLf~~~-~~aAv~d~--~----~~~~fNsGvmlin~~~~  144 (333)
T 1ll2_A           75 MKRPELGVTLTKLHCWS-L--TQYSKCVFMDADTLVLANIDDLFERE-ELSAAPDP--G----WPDCFNSGVFVYQPSVE  144 (333)
T ss_dssp             HHCGGGHHHHHHGGGGG-C--TTCSEEEEECTTEEECSCCGGGGGSC-SSEEEECS--S----STTSEEEEEEEECCCHH
T ss_pred             ccccchHHHHHHHHHhH-h--cCCCeEEEEeCCEEeccCHHHHhCCC-ceeEEecC--C----CCcceeeeEEEEeCCHH
Confidence            11112346777877664 2  345 5999999999999998888544 33333342  1    13478999999999865


Q ss_pred             HHHHHHHHHHHHhcCCCCCchHHHHHHHc
Q 017033          240 TIEFYKFWYNSRKMFPGLHDQDVLNEIKF  268 (378)
Q Consensus       240 ti~f~~~W~~~r~~~p~~~DQ~vfN~il~  268 (378)
                      +-+-+-.+.... ..-...||++||.+..
T Consensus       145 ~~~~l~~~~~~~-~~~~~~DQ~~LN~~f~  172 (333)
T 1ll2_A          145 TYNQLLHVASEQ-GSFDGGDQGLLNTFFN  172 (333)
T ss_dssp             HHHHHHHHHHHT-CCTTSSHHHHHHHHTT
T ss_pred             HHHHHHHHHHhc-CCCCCCCHHHHHHHHH
Confidence            532222222211 1123579999999884

>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A

Probab=97.38  E-value=0.00041  Score=65.89  Aligned_cols=163  Identities=20%  Similarity=0.159  Sum_probs=91.5

Q ss_pred             CeEEEEE-ecccccCCCchHHHHHHHhhhccCCccccCcEEEEE---cChHHHHHhHhcCCcEEEecCCCCCCCcc--hh
Q 017033           85 NTVIITT-LNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVA---LDSKALDHCLSTHPHCYALNTSGLDFSGK--EA  158 (378)
Q Consensus        85 ~tVIvT~-~N~a~a~p~s~lDlfLes~r~g~~t~~l~~~llVvA---lD~~a~~~c~~~g~~cy~~~~~~~d~~~~--~~  158 (378)
                      +...+|. +|..|.. |  +-..+.|++.. ++.  .+ ++|+.   ++++..+.+++.+......+  ..+....  ..
T Consensus         4 ~~AyvTl~td~~Yl~-g--a~vL~~SL~~~-~s~--~~-lvvLvt~~vs~~~~~~L~~~~~~vi~V~--~l~~~~~~~~~   74 (263)
T 3u2u_A            4 DQAFVTLTTNDAYAK-G--ALVLGSSLKQH-RTT--RR-LVVLATPQVSDSMRKVLETVFDEVIMVD--VLDSGDSAHLT   74 (263)
T ss_dssp             TEEEEEEESSHHHHH-H--HHHHHHHHHHT-TCC--SE-EEEEECTTSCHHHHHHHHHHSSEEEECC--CCCCCCHHHHH
T ss_pred             ceEEEEEEECHHHHH-H--HHHHHHHHHHh-CCC--CC-EEEEecCCCCHHHHHHHHHcCCeEEEee--ecCCcchhhhh
Confidence            4445554 4777751 1  12356677642 221  22 34443   34677788888775554433  2221110  00


Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCCCCcEEEeccCCCCCCCCCCCCCCceEEEEeeC
Q 017033          159 YFMTSSYLEMMWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSN  237 (378)
Q Consensus       159 ~f~s~~yl~m~w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~~aDi~issD~~~g~~~d~~~~~NtGf~yvRst  237 (378)
                      ....+.+ ..+|.|+.+.. ++  .| .||+.|+|++.++|.-+.|..+ .+....|..      .+..+|+|++.+.++
T Consensus        75 ~~~rp~~-~~~~~kl~~~~-l~--~~~~vlylD~D~~v~~~~~~Lf~~~-~~aA~~d~~------~~~~fNsGv~li~p~  143 (263)
T 3u2u_A           75 LMKRPEL-GVTLTKLHCWS-LT--QYSKCVFMDADTLVLANIDDLFDRE-ELSAAPDPG------WPDCFNSGVFVYQPS  143 (263)
T ss_dssp             HTTCTTG-GGGGGGGGGGG-CT--TCSEEEEECTTEEECSCCGGGGGSC-SSEEEECTT------STTSEEEEEEEECCC
T ss_pred             hhcCcch-hHHhHHHHhcc-cc--CcceEEEEcCCEeeccCHHHHhCCC-cceEeccCC------CCccccCeEEEEccc
Confidence            1111111 23555665554 22  46 5999999999999988887654 344444421      134689999999998


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCchHHHHHHHc
Q 017033          238 NRTIEFYKFWYNSRKMFPGLHDQDVLNEIKF  268 (378)
Q Consensus       238 ~rti~f~~~W~~~r~~~p~~~DQ~vfN~il~  268 (378)
                      ..+-+-+-+..... ..-...||++||.++.
T Consensus       144 ~~~~~~l~~~~~~~-~~~~~~DQd~LN~~f~  173 (263)
T 3u2u_A          144 VETYNQLLHLASEQ-GSFDGGDQGILNTFFS  173 (263)
T ss_dssp             HHHHHHHHHHHHHH-CCTTSSHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhc-CCCCcccHHHHHHHhc
Confidence            65544333333322 2234589999999994

>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*

Probab=96.60  E-value=0.0037  Score=59.95  Aligned_cols=178  Identities=14%  Similarity=0.189  Sum_probs=93.6

Q ss_pred             EEEEecccccCCCchHHHHHHHh-hhccCCccccCcEEEEEcC--hHHHHHhHhc----CCcEEEecCCCCCCCcc-h-h
Q 017033           88 IITTLNQAWAEPNSIFDIFLESF-RTGNGTGKLLDHLVVVALD--SKALDHCLST----HPHCYALNTSGLDFSGK-E-A  158 (378)
Q Consensus        88 IvT~~N~a~a~p~s~lDlfLes~-r~g~~t~~l~~~llVvAlD--~~a~~~c~~~----g~~cy~~~~~~~d~~~~-~-~  158 (378)
                      |+.++|..|..   -+-..+.|+ +.  .+.. --++.|++.|  ++..+.+++.    +............+..- . .
T Consensus         3 I~~~~d~~Y~~---~~~vli~Sl~l~--~~~~-~~~f~il~~~ls~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~   76 (311)
T 1g9r_A            3 IVFAADDNYAA---YLCVAAKSVEAA--HPDT-EIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAGFPLNI   76 (311)
T ss_dssp             EEEEECGGGHH---HHHHHHHHHHHT--CTTS-CCEEEEEESSCCHHHHHHHHHHSGGGTTTEEEEECCGGGGTTSCCCC
T ss_pred             EEEECCHhHHH---HHHHHHHHHHHH--cCCC-CceEEEEECCCCHHHHHHHHHHHHHcCCEEEEEEcCHHHHhcCcccc
Confidence            55667888862   223466777 43  2211 1234455544  6666666554    43333332221111110 0 1


Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCC---CCcEEEeccCCCC-CC--------CCCCC
Q 017033          159 YFMTSSYLEMMWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDP---DADFQIACDRFSG-NS--------FNLRN  225 (378)
Q Consensus       159 ~f~s~~yl~m~w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~---~aDi~issD~~~g-~~--------~d~~~  225 (378)
                      .+-+    ..++.|+.+ -++|. .| .||+.|+|++.++|.-+.+..   +.-+....|++.. .+        .....
T Consensus        77 ~~~s----~~~y~Rl~l-~~ll~-~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~  150 (311)
T 1g9r_A           77 RHIS----ITTYARLKL-GEYIA-DCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGEY  150 (311)
T ss_dssp             TTCC----GGGGGGGGH-HHHCC-SCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTTCCTTSC
T ss_pred             ccCC----HHHHHHHHH-HHHhh-hcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhhhHHHHHhcCCCCCCc
Confidence            1111    123335433 44453 44 599999999999998877753   2345444554321 00        01234


Q ss_pred             CCCceEEEEeeCH----HHHHHHHHHHHHHhcCCCCCchHHHHHHHcCCCCCCCceEEEEcccc
Q 017033          226 EPNGGFNYVKSNN----RTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTK  285 (378)
Q Consensus       226 ~~NtGf~yvRst~----rti~f~~~W~~~r~~~p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~  285 (378)
                      ..|+|++.+..+.    ...+-+..|.......-...||+++|.+...        ++..||..
T Consensus       151 yfNsGv~linl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~lN~~f~~--------~~~~Lp~~  206 (311)
T 1g9r_A          151 YFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILNGLFKG--------GVCYANSR  206 (311)
T ss_dssp             CEEEEEEEECHHHHTTSCHHHHHHHHHHHHTTTCSSHHHHHHHHHHTT--------SEEEECGG
T ss_pred             eEeeeeeeeeHHHHHhcchHHHHHHHHHhccCcCccCCcCHHHHHHcC--------CEEEcChh
Confidence            7899999998763    1223333454433222346799999998832        25677765

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0

Probab=96.54  E-value=0.0091  Score=56.53  Aligned_cols=179  Identities=17%  Similarity=0.189  Sum_probs=83.9

Q ss_pred             EEEEecccccCCCchHHHHHHHhhhccCCccccCcEEEEEcC--hHHHHHhHhc----CCcEEEecCCCCCCCcchhccc
Q 017033           88 IITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVALD--SKALDHCLST----HPHCYALNTSGLDFSGKEAYFM  161 (378)
Q Consensus        88 IvT~~N~a~a~p~s~lDlfLes~r~g~~t~~l~~~llVvAlD--~~a~~~c~~~----g~~cy~~~~~~~d~~~~~~~f~  161 (378)
                      |+.++|..|..   -+-..+.|++..  +..---++.|+.-+  ++..+.+++.    +............+.+ .  -.
T Consensus         8 I~~~~d~~Y~~---~~~v~i~Sl~~~--~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~-~--~~   79 (276)
T 3tzt_A            8 LLLTLDENYIP---QMKVLMTSIYIN--NPGRIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATDDLFSF-A--KV   79 (276)
T ss_dssp             EEEECCGGGHH---HHHHHHHHHHHH--STTCCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC------------
T ss_pred             EEEEeCHhHHH---HHHHHHHHHHHh--CCCCceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCHHHHhc-C--cc
Confidence            67888999862   123356676542  11111123344433  4444444442    3322222221111221 0  01


Q ss_pred             cHHHHHHHHHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCCC---CcEEEeccCCCCCC---------CCCCCCCC
Q 017033          162 TSSYLEMMWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPD---ADFQIACDRFSGNS---------FNLRNEPN  228 (378)
Q Consensus       162 s~~yl~m~w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~~---aDi~issD~~~g~~---------~d~~~~~N  228 (378)
                      +..|...++.|+. +-+++...+ .||+.|+|++.++|.-+.+..+   .-+....|+.....         .......|
T Consensus        80 ~~~~s~~~~~rl~-~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~~~~~~~~~~l~~~~~yfN  158 (276)
T 3tzt_A           80 TDRYPKEMYYRLL-AGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTDMANNVNRIRLGTDTDYYN  158 (276)
T ss_dssp             ----CHHHHHHHT-HHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC--------------------CEE
T ss_pred             ccccCHHHHHHHH-HHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccchHHHHHHHhcCCCCCCeEE
Confidence            1123334454543 334554445 6999999999999998877532   33555556533210         00125789


Q ss_pred             ceEEEEeeCH-----HHHHHHHHHHHHHhcCCCCCchHHHHHHHcCCCCCCCceEEEEccc
Q 017033          229 GGFNYVKSNN-----RTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDT  284 (378)
Q Consensus       229 tGf~yvRst~-----rti~f~~~W~~~r~~~p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~  284 (378)
                      +|++.+-.+.     -+.+++ .|.......-...||++||.++..        ++..||.
T Consensus       159 sGV~linl~~~R~~~~~~~~~-~~~~~~~~~~~~~DQd~LN~~f~~--------~~~~Lp~  210 (276)
T 3tzt_A          159 SGLLLINLKRAREEIDPDEIF-SFVEDNHMNLLLPDQDILNAMYGD--------RIYPLDD  210 (276)
T ss_dssp             EEEEEEEHHHHHHHCCHHHHH-HHHHHC--------CHHHHHHHGG--------GEEEEEH
T ss_pred             eeEEEEEHHHHHhhhHHHHHH-HHHHhccccccCCChhHHHHHHhC--------CEEECCc
Confidence            9999997764     122222 333321111235899999999842        3788886

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	378
d1ll2a_	263	Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId:	97.7
d1ga8a_	282	Galactosyltransferase LgtC {Neisseria meningitidis	97.43

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Glycogenin
domain: Glycogenin
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.70  E-value=0.00017  Score=64.87  Aligned_cols=160  Identities=18%  Similarity=0.091  Sum_probs=97.5

Q ss_pred             EEecccccCCCchHHHHHHHhhhccCCccccCcEEEEEc-C--hHHHHHhHhcCCcEEEecCCCCCCCcchhccccHHHH
Q 017033           90 TTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVAL-D--SKALDHCLSTHPHCYALNTSGLDFSGKEAYFMTSSYL  166 (378)
Q Consensus        90 T~~N~a~a~p~s~lDlfLes~r~g~~t~~l~~~llVvAl-D--~~a~~~c~~~g~~cy~~~~~~~d~~~~~~~f~s~~yl  166 (378)
                      ..+|.+|+ ||  +-..+.|++.. +.  -.+ ++|+.. |  ++..+.+++.+..+.....-..+... ........+.
T Consensus         9 ~~t~d~Yl-~~--a~vl~~SL~~~-~~--~~~-~vvl~~~~i~~~~~~~L~~~~~~~~~v~~i~~~~~~-~~~~~~~~~~   80 (263)
T d1ll2a_           9 LTTNDAYA-KG--ALVLGSSLKQH-RT--SRR-LAVLTTPQVSDTMRKALEIVFDEVITVDILDSGDSA-HLTLMKRPEL   80 (263)
T ss_dssp             EESSHHHH-HH--HHHHHHHHHHT-TC--CSE-EEEEECTTSCHHHHHHHHHHCSEEEECCTTSTTSTT-HHHHHHCGGG
T ss_pred             EEeCHHHH-HH--HHHHHHHHHHH-CC--CCC-EEEEECCCCCHHHHHHHHHhCCcceeEEeecCcchh-hhhhhccccc
Confidence            33699985 11  23356677542 11  123 444443 3  77788888888888766532111111 1111122344


Q ss_pred             HHHHHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccCCCCcEEEeccCCCCCCCCCCCCCCceEEEEeeCHHHHHHHH
Q 017033          167 EMMWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFDPDADFQIACDRFSGNSFNLRNEPNGGFNYVKSNNRTIEFYK  245 (378)
Q Consensus       167 ~m~w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~~~aDi~issD~~~g~~~d~~~~~NtGf~yvRst~rti~f~~  245 (378)
                      ..++.|+.+.. +  ..| .||+.|+|++-++|+-+.|..+.-..+. |..      .....|+|++.+.++..+.+-+.
T Consensus        81 ~~ty~Kl~i~~-l--~~ydkvlYLDaD~lv~~~id~Lf~~~~~~a~~-~~~------~~~~~nsGv~l~~p~~~~~~~i~  150 (263)
T d1ll2a_          81 GVTLTKLHCWS-L--TQYSKCVFMDADTLVLANIDDLFEREELSAAP-DPG------WPDCFNSGVFVYQPSVETYNQLL  150 (263)
T ss_dssp             HHHHHHGGGGG-C--TTCSEEEEECTTEEECSCCGGGGGSCSSEEEE-CSS------STTSEEEEEEEECCCHHHHHHHH
T ss_pred             hhhhHHHHHhh-h--cccceEEEeCCCEEEecCHHHHhcCCccceec-cCC------CcccccCCcEEECccHHHHHHHH
Confidence            56677876654 2  345 4999999999999999998665433332 211      23468999999999999877766


Q ss_pred             HHHHHHhcCCCCCchHHHHHHHc
Q 017033          246 FWYNSRKMFPGLHDQDVLNEIKF  268 (378)
Q Consensus       246 ~W~~~r~~~p~~~DQ~vfN~il~  268 (378)
                      ....... .....||+++|..+.
T Consensus       151 ~~~~~~~-~~~~~dq~~ln~~~~  172 (263)
T d1ll2a_         151 HVASEQG-SFDGGDQGLLNTFFN  172 (263)
T ss_dssp             HHHHHTC-CTTSSHHHHHHHHTT
T ss_pred             HHHHhhC-CCChhhhhHHHHHHH
Confidence            6443222 233579999999884

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=97.43  E-value=0.00011  Score=66.73  Aligned_cols=181  Identities=14%  Similarity=0.160  Sum_probs=94.5

Q ss_pred             EEEEecccccCCCchHHHHHHHhhhccCCccccCcEEEEEc--ChHHHHHhHhc----CCcEEEecCCCCCCCcchhccc
Q 017033           88 IITTLNQAWAEPNSIFDIFLESFRTGNGTGKLLDHLVVVAL--DSKALDHCLST----HPHCYALNTSGLDFSGKEAYFM  161 (378)
Q Consensus        88 IvT~~N~a~a~p~s~lDlfLes~r~g~~t~~l~~~llVvAl--D~~a~~~c~~~----g~~cy~~~~~~~d~~~~~~~f~  161 (378)
                      |+.++|..|..   .+-..+.|++..  ....--++.|+..  .++..+.+.+.    +..+...+....++.. ... .
T Consensus         3 Iv~~~D~nY~~---~~~~~i~SL~~~--~~~~~~~~~il~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~-~~~-~   75 (282)
T d1ga8a_           3 IVFAADDNYAA---YLCVAAKSVEAA--HPDTEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAG-FPL-N   75 (282)
T ss_dssp             EEEEECGGGHH---HHHHHHHHHHHH--CTTSCCEEEEEESSCCHHHHHHHHHTSGGGTTTEEEEECCGGGGTT-SCC-C
T ss_pred             EEEECCHHHHH---HHHHHHHHHHHH--CcCCCEEEEEEcCCCCHHHHHHHHHHHHHcCCeEEEEECCchHhcc-ccc-c
Confidence            56678999862   223356676431  1111123444443  35555555443    3444333322111211 000 0


Q ss_pred             cHHHHHHHHHHHHHHHHHHHcCC-cEEEeeccEEeccCcccccC---CCCcEEEeccCCCCCC---------CCCCCCCC
Q 017033          162 TSSYLEMMWIRIRLLSDVLAMGY-NFVFTDADIVWLQNPFQRFD---PDADFQIACDRFSGNS---------FNLRNEPN  228 (378)
Q Consensus       162 s~~yl~m~w~K~~~l~~vL~lGy-~vLftDvDVVWlRnPfp~~~---~~aDi~issD~~~g~~---------~d~~~~~N  228 (378)
                      .+.+..+++.|+ ++-++|. +| .+|+.|+|++-++|+-+.+.   .+.-+....|.+....         .+.....|
T Consensus        76 ~~~~s~~~y~Rl-~l~~~lp-~~~kiiyLD~D~iv~~dl~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfN  153 (282)
T d1ga8a_          76 IRHISITTYARL-KLGEYIA-DCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGEYYFN  153 (282)
T ss_dssp             CTTCCGGGGGGG-GHHHHCC-SCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTTCCTTSCCEE
T ss_pred             ccccCHHHHHHH-HHhhhCC-ccceEEEecCCEEEecchHHHHhcccccceeeeehhhhhhhhhhhHHHhCCCCCCceee
Confidence            011123344565 3566665 56 49999999999999987774   2455666666433211         12234589


Q ss_pred             ceEEEEee-----CHHHHHHHHHHHHHHhcCCCCCchHHHHHHHcCCCCCCCceEEEEccccc
Q 017033          229 GGFNYVKS-----NNRTIEFYKFWYNSRKMFPGLHDQDVLNEIKFDPYIQKIQVKIRFLDTKY  286 (378)
Q Consensus       229 tGf~yvRs-----t~rti~f~~~W~~~r~~~p~~~DQ~vfN~il~~~~~~~~gl~v~~Ld~~~  286 (378)
                      +|+|.+-.     ..-+.++++ |.......-...||++||.++..        ++..||..+
T Consensus       154 sGVml~n~~~~r~~~~~~~~~~-~~~~~~~~~~~~DQd~LN~~f~~--------~~~~L~~~~  207 (282)
T d1ga8a_         154 AGVLLINLKKWRRHDIFKMSSE-WVEQYKDVMQYQDQDILNGLFKG--------GVCYANSRF  207 (282)
T ss_dssp             EEEEEECHHHHTTSCHHHHHHH-HHHHHTTTCSSTHHHHHHHHHTT--------SEEEECGGG
T ss_pred             cceeeechhhhhhhhHHHHHHH-HHHhcccCcccCchhHHHHHhcC--------CEEeCCHHH
Confidence            99999932     222334443 33323222346899999999832        156666553