Citrus Sinensis ID: 017049

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
MYVSWIEFFFFPIFSYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLNHFI
cccccEEcEEEccccEEEEEEEEcccccEEEEEEEcccccEEEccccccccccccccccccccccccccccHHHccccccccccccccccccEEEEEEccccEEEEEEEEEEEEEEEcccccccccEEEEEccccccccccccccccEEEEccccccHHHHHHHHccccccEEEEEEccccccEEEEccccccccccEEEEccccccccccEEEEEcEEEEccEEEccccccEEEEcccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEEEEEEccccEEEEccccEEEEEEcccEEEEEEEEcccccccccEEEEEEEEEEEEEEEEccccEEEEEcccccccccccccc
cccccccccEEccccEEEEEEEEccccccEEEEEEccccccEEEcccccccccccccccccccccccccccHHHHHccccccccccccccccEEEEEEEccccccEEEEEEEEEEEcccccEccccEEEEccccccccccccccccccEEccccccccHHHHHHHccccccEEEEEEEccccEEEEEcccccccccEEEEEEEcccccccEEEEcccEEEEccEEEEccccEEEEEccccEEcccHHHHHHHHHHHHccccccccEcccccccccEEEcccEEEEcccccccccEEEEEEcccccEEccccHHHEEEEEcccEEEEEEccccccccccEEEEEEEEEEcEEEEEEccccEEEEEcccccccccccccc
MYVSWIEFFFFPIFSYFAvnltvgkppklfdfdfdtgsdltwvqcdapctgctkppekqykphknivpcsnprcaalhwpnpprckhpndqcdyeieygdggssigalvtdlfplrfsngsvfnvpltfgcgynqhnpgplsppdtagvlglgrgrISIVSQLREYGLIRNVIGhcigqngrgvlflgdgkvpssgvawtpmlqnsadlkhyilgpaellysgkscglkdltlifdsgasyayFTSRVYQEIVSLIMRDLigtplklapddktlpicwrgpfkalgQVTEYFKPLAlsftnrrnsvrlvvppeaylvISGRKNVCLGilngseaevgenniigeifmqdkmviydnekqrigwkpedcntllslnhfi
MYVSWIEFFFFPIFSYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALsftnrrnsvrlvVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKqrigwkpedcntllslnhfi
MYVSWIEffffpifsyfAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLNHFI
*YVSWIEFFFFPIFSYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTK*****YKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHN********TAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSL****
****WIEFFFFPIFSYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAA************NDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIG*****APDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLS*NH**
MYVSWIEFFFFPIFSYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLNHFI
**VSWIEFFFFPIFSYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLS*****
iHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MYVSWIEFFFFPIFSYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLNHFI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query378 2.2.26 [Sep-21-2011]
A2ZC67410 Aspartic proteinase Asp1 N/A no 0.936 0.863 0.406 2e-70
Q0IU52410 Aspartic proteinase Asp1 no no 0.936 0.863 0.398 3e-69
Q9S9K4475 Aspartic proteinase-like no no 0.894 0.711 0.287 5e-30
Q766C3437 Aspartic proteinase nepen N/A no 0.843 0.729 0.270 2e-21
Q766C2438 Aspartic proteinase nepen N/A no 0.880 0.760 0.267 3e-20
Q3EBM5447 Probable aspartic proteas no no 0.880 0.744 0.282 4e-20
Q9LX20528 Aspartic proteinase-like no no 0.867 0.621 0.263 7e-20
Q9LZL3453 Aspartic proteinase PCS1 no no 0.870 0.726 0.251 4e-14
Q6XBF8437 Aspartic proteinase CDR1 no no 0.859 0.743 0.25 2e-13
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.841 0.636 0.267 3e-13
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function desciption
 Score =  266 bits (681), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 152/374 (40%), Positives = 216/374 (57%), Gaps = 20/374 (5%)

Query: 11  FPIFSYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPH-KNIVPC 69
           +PI  +F V + +G P K +  D DTGS LTW+QCD PC  C K P   YKP  K  V C
Sbjct: 33  YPIGHFF-VTMNIGDPAKPYFLDIDTGSTLTWLQCDYPCINCNKVPHGLYKPELKYAVKC 91

Query: 70  SNPRCAALH--WPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPL 127
           +  RCA L+     P +C  P +QC Y I+Y  GGSSIG L+ D F L  SNG+     +
Sbjct: 92  TEQRCADLYADLRKPMKCG-PKNQCHYGIQY-VGGSSIGVLIVDSFSLPASNGT-NPTSI 148

Query: 128 TFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLI-RNVIGHCIGQNGRGVLF 186
            FGCGYNQ       P    G+LGLGRG+++++SQL+  G+I ++V+GHCI   G+G LF
Sbjct: 149 AFGCGYNQGKNNHNVPTPVNGILGLGRGKVTLLSQLKSQGVITKHVLGHCISSKGKGFLF 208

Query: 187 LGDGKVPSSGVAWTPMLQNSADLKHYI--LGPAELLYSGKSCGLKDLTLIFDSGASYAYF 244
            GD KVP+SGV W+PM   + + KHY    G  +   + K      + +IFDSGA+Y YF
Sbjct: 209 FGDAKVPTSGVTWSPM---NREHKHYSPRQGTLQFNSNSKPISAAPMEVIFDSGATYTYF 265

Query: 245 TSRVYQEIVSLIMRDLIGT---PLKLAPDDKTLPICWRG--PFKALGQVTEYFKPLALSF 299
             + Y   +S++   L        ++   D+ L +CW+G    + + +V + F+ L+L F
Sbjct: 266 ALQPYHATLSVVKSTLSKECKFLTEVKEKDRALTVCWKGKDKIRTIDEVKKCFRSLSLKF 325

Query: 300 TNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAE--VGENNIIGEIFMQDKMVIYDNE 357
            +      L +PPE YL+IS   +VCLGIL+GS+    +   N+IG I M D+MVIYD+E
Sbjct: 326 ADGDKKATLEIPPEHYLIISQEGHVCLGILDGSKEHPSLAGTNLIGGITMLDQMVIYDSE 385

Query: 358 KQRIGWKPEDCNTL 371
           +  +GW    C+ +
Sbjct: 386 RSLLGWVNYQCDRI 399
Possesses protease activity in vitro.
Oryza sativa subsp. indica (taxid: 39946)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query378
15219354405 aspartyl protease-like protein [Arabidop 0.944 0.881 0.578 1e-123
297841447410 hypothetical protein ARALYDRAFT_475850 [ 0.944 0.870 0.567 1e-119
224082314410 predicted protein [Populus trichocarpa] 0.933 0.860 0.578 1e-117
255558640424 nucellin, putative [Ricinus communis] gi 0.936 0.834 0.555 1e-115
30699261466 aspartyl protease-like protein [Arabidop 0.957 0.776 0.556 1e-114
356509401407 PREDICTED: aspartic proteinase Asp1-like 0.936 0.869 0.569 1e-114
356554625452 PREDICTED: aspartic proteinase Asp1-like 0.936 0.783 0.555 1e-113
297842525467 hypothetical protein ARALYDRAFT_476912 [ 0.960 0.777 0.551 1e-113
224066811422 predicted protein [Populus trichocarpa] 0.928 0.831 0.550 1e-112
30699263432 aspartyl protease-like protein [Arabidop 0.944 0.826 0.558 1e-112
>gi|15219354|ref|NP_175079.1| aspartyl protease-like protein [Arabidopsis thaliana] gi|12320825|gb|AAG50556.1|AC074228_11 nucellin, putative [Arabidopsis thaliana] gi|332193902|gb|AEE32023.1| aspartyl protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 210/363 (57%), Positives = 264/363 (72%), Gaps = 6/363 (1%)

Query: 11  FPIFSYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCS 70
           FP+  Y++V + +G PPK F FD DTGSDLTWVQCDAPC+GCT PP  QYKP  NI+PCS
Sbjct: 44  FPL-GYYSVLMQIGSPPKAFQFDIDTGSDLTWVQCDAPCSGCTLPPNLQYKPKGNIIPCS 102

Query: 71  NPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFG 130
           NP C ALHWPN P C +P +QCDYE++Y D GSS+GALVTD FPL+  NGS    P+ FG
Sbjct: 103 NPICTALHWPNKPHCPNPQEQCDYEVKYADQGSSMGALVTDQFPLKLVNGSFMQPPVAFG 162

Query: 131 CGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDG 190
           CGY+Q  P    PP TAGVLGLGRG+I +++QL   GL RNV+GHC+   G G LF GD 
Sbjct: 163 CGYDQSYPSAHPPPATAGVLGLGRGKIGLLTQLVSAGLTRNVVGHCLSSKGGGFLFFGDN 222

Query: 191 KVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQ 250
            VPS GVAWTP+L       HY  GPA+LL++GK  GLK L LIFD+G+SY YF S+ YQ
Sbjct: 223 LVPSIGVAWTPLLSQD---NHYTTGPADLLFNGKPTGLKGLKLIFDTGSSYTYFNSKAYQ 279

Query: 251 EIVSLIMRDLIGTPLKLAPDDKTLPICWRG--PFKALGQVTEYFKPLALSFTNRRNSVRL 308
            I++LI  DL  +PLK+A +DKTLPICW+G  PFK++ +V  +FK + ++FTN R + +L
Sbjct: 280 TIINLIGNDLKVSPLKVAKEDKTLPICWKGAKPFKSVLEVKNFFKTITINFTNGRRNTQL 339

Query: 309 VVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDC 368
            + PE YL++S   NVCLG+LNGSE  +  +N+IG+I MQ  M+IYDNEKQ++GW   DC
Sbjct: 340 YLAPELYLIVSKTGNVCLGLLNGSEVGLQNSNVIGDISMQGLMMIYDNEKQQLGWVSSDC 399

Query: 369 NTL 371
           N L
Sbjct: 400 NKL 402

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297841447|ref|XP_002888605.1| hypothetical protein ARALYDRAFT_475850 [Arabidopsis lyrata subsp. lyrata] gi|297334446|gb|EFH64864.1| hypothetical protein ARALYDRAFT_475850 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224082314|ref|XP_002306645.1| predicted protein [Populus trichocarpa] gi|222856094|gb|EEE93641.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255558640|ref|XP_002520345.1| nucellin, putative [Ricinus communis] gi|223540564|gb|EEF42131.1| nucellin, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|30699261|ref|NP_850981.1| aspartyl protease-like protein [Arabidopsis thaliana] gi|17065172|gb|AAL32740.1| nucellin-like protein [Arabidopsis thaliana] gi|24899795|gb|AAN65112.1| nucellin-like protein [Arabidopsis thaliana] gi|332197863|gb|AEE35984.1| aspartyl protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356509401|ref|XP_003523438.1| PREDICTED: aspartic proteinase Asp1-like [Glycine max] Back     alignment and taxonomy information
>gi|356554625|ref|XP_003545645.1| PREDICTED: aspartic proteinase Asp1-like [Glycine max] Back     alignment and taxonomy information
>gi|297842525|ref|XP_002889144.1| hypothetical protein ARALYDRAFT_476912 [Arabidopsis lyrata subsp. lyrata] gi|297334985|gb|EFH65403.1| hypothetical protein ARALYDRAFT_476912 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224066811|ref|XP_002302227.1| predicted protein [Populus trichocarpa] gi|222843953|gb|EEE81500.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|30699263|ref|NP_177872.3| aspartyl protease-like protein [Arabidopsis thaliana] gi|332197862|gb|AEE35983.1| aspartyl protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query378
TAIR|locus:2205861405 AT1G44130 [Arabidopsis thalian 0.928 0.866 0.587 5.4e-118
TAIR|locus:2204725466 AT1G77480 [Arabidopsis thalian 0.944 0.766 0.561 2.9e-112
TAIR|locus:2028466583 AT1G49050 [Arabidopsis thalian 0.933 0.605 0.396 1.1e-69
TAIR|locus:2200023492 AT1G08210 [Arabidopsis thalian 0.851 0.654 0.299 1.1e-34
TAIR|locus:2040545512 AT2G36670 [Arabidopsis thalian 0.862 0.636 0.278 1.8e-32
TAIR|locus:2172661493 AT5G22850 [Arabidopsis thalian 0.878 0.673 0.277 9.8e-32
TAIR|locus:2183617482 AT5G36260 [Arabidopsis thalian 0.878 0.688 0.302 5.4e-31
TAIR|locus:2200365475 AT1G65240 [Arabidopsis thalian 0.880 0.701 0.287 8.8e-31
TAIR|locus:2075512488 AT3G02740 [Arabidopsis thalian 0.870 0.674 0.298 7.3e-30
TAIR|locus:2167776 631 AT5G43100 [Arabidopsis thalian 0.862 0.516 0.284 1.6e-29
TAIR|locus:2205861 AT1G44130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
 Identities = 209/356 (58%), Positives = 261/356 (73%)

Query:    18 AVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAAL 77
             +V + +G PPK F FD DTGSDLTWVQCDAPC+GCT PP  QYKP  NI+PCSNP C AL
Sbjct:    50 SVLMQIGSPPKAFQFDIDTGSDLTWVQCDAPCSGCTLPPNLQYKPKGNIIPCSNPICTAL 109

Query:    78 HWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHN 137
             HWPN P C +P +QCDYE++Y D GSS+GALVTD FPL+  NGS    P+ FGCGY+Q  
Sbjct:   110 HWPNKPHCPNPQEQCDYEVKYADQGSSMGALVTDQFPLKLVNGSFMQPPVAFGCGYDQSY 169

Query:   138 PGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGV 197
             P    PP TAGVLGLGRG+I +++QL   GL RNV+GHC+   G G LF GD  VPS GV
Sbjct:   170 PSAHPPPATAGVLGLGRGKIGLLTQLVSAGLTRNVVGHCLSSKGGGFLFFGDNLVPSIGV 229

Query:   198 AWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIM 257
             AWTP+L  S D  HY  GPA+LL++GK  GLK L LIFD+G+SY YF S+ YQ I++LI 
Sbjct:   230 AWTPLL--SQD-NHYTTGPADLLFNGKPTGLKGLKLIFDTGSSYTYFNSKAYQTIINLIG 286

Query:   258 RDLIGTPLKLAPDDKTLPICWRG--PFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAY 315
              DL  +PLK+A +DKTLPICW+G  PFK++ +V  +FK + ++FTN R + +L + PE Y
Sbjct:   287 NDLKVSPLKVAKEDKTLPICWKGAKPFKSVLEVKNFFKTITINFTNGRRNTQLYLAPELY 346

Query:   316 LVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTL 371
             L++S   NVCLG+LNGSE  +  +N+IG+I MQ  M+IYDNEKQ++GW   DCN L
Sbjct:   347 LIVSKTGNVCLGLLNGSEVGLQNSNVIGDISMQGLMMIYDNEKQQLGWVSSDCNKL 402
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2204725 AT1G77480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028466 AT1G49050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200023 AT1G08210 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040545 AT2G36670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172661 AT5G22850 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183617 AT5G36260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200365 AT1G65240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075512 AT3G02740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167776 AT5G43100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.691
3rd Layer3.4.23.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
AT1G44130
nucellin protein, putative; nucellin protein, putative; FUNCTIONS IN- aspartic-type endopeptidase activity; INVOLVED IN- proteolysis; LOCATED IN- plant-type cell wall; EXPRESSED IN- stem, embryo, pedicel, stamen; EXPRESSED DURING- 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s- Peptidase aspartic, catalytic (InterPro-IPR009007), Peptidase A1 (InterPro-IPR001461), Peptidase aspartic, active site (InterPro-IPR001969); BEST Arabidopsis thaliana protein match is- nucellin protein, putative (TAIR-AT1G77480.2); Has 1109 Blast hits to 1105 [...] (405 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT2G42360
zinc finger (C3HC4-type RING finger) family protein; zinc finger (C3HC4-type RING finger) famil [...] (236 aa)
   •    0.524
AT1G01680
U-box domain-containing protein; U-box domain-containing protein; FUNCTIONS IN- ubiquitin-prote [...] (308 aa)
   •    0.508
ACA13
calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13); [...] (1017 aa)
   •    0.505
YLS9
YLS9 (YELLOW-LEAF-SPECIFIC GENE 9); Encodes a protein whose sequence is similar to tobacco hair [...] (227 aa)
   •    0.500
AT3G47480
calcium-binding EF hand family protein; calcium-binding EF hand family protein; FUNCTIONS IN- c [...] (183 aa)
   •    0.499
AT5G02780
In2-1 protein, putative; In2-1 protein, putative; FUNCTIONS IN- molecular_function unknown; INV [...] (237 aa)
   •    0.489
anac042
anac042 (Arabidopsis NAC domain containing protein 42); transcription factor; Arabidopsis NAC d [...] (275 aa)
   •    0.481
AT1G08050
zinc finger (C3HC4-type RING finger) family protein; zinc finger (C3HC4-type RING finger) famil [...] (641 aa)
   •    0.481
AtRLP7
AtRLP7 (Receptor Like Protein 7); kinase/ protein binding; Receptor Like Protein 7 (AtRLP7); FU [...] (1019 aa)
   •    0.480
ATGSTU11
ATGSTU11 (GLUTATHIONE S-TRANSFERASE TAU 11); glutathione transferase; Encodes glutathione trans [...] (234 aa)
   •    0.480

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query378
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 1e-130
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 8e-50
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 4e-36
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 5e-35
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 7e-24
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 1e-14
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 2e-12
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 5e-12
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 5e-11
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 1e-04
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 0.002
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information 
 Score =  374 bits (961), Expect = e-130
 Identities = 163/353 (46%), Positives = 196/353 (55%), Gaps = 81/353 (22%)

Query: 16  YFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCA 75
           Y+ V + +G PPK +  D DTGSDLTW+QCDAPCTGC                       
Sbjct: 2   YYYVTINIGNPPKPYFLDIDTGSDLTWLQCDAPCTGC----------------------- 38

Query: 76  ALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQ 135
                          QCDYEIEY DGGSS+G LVTD+F L+ +NGS     + FGCGY+Q
Sbjct: 39  ---------------QCDYEIEYADGGSSMGVLVTDIFSLKLTNGSRAKPRIAFGCGYDQ 83

Query: 136 HNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSS 195
             P    PP T G+LGLGRG+IS+ SQL   G+I+NVIGHC+  NG G LF GD  VPSS
Sbjct: 84  QGPLLNPPPPTDGILGLGRGKISLPSQLASQGIIKNVIGHCLSSNGGGFLFFGDDLVPSS 143

Query: 196 GVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSL 255
           GV WTPM + S   KHY  GPA LL++G+  G K L ++FDSG+SY YF ++        
Sbjct: 144 GVTWTPMRRESQK-KHYSPGPASLLFNGQPTGGKGLEVVFDSGSSYTYFNAQA------- 195

Query: 256 IMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAY 315
                                              YFKPL L F     +  L +PPE Y
Sbjct: 196 -----------------------------------YFKPLTLKFGKGWRTRLLEIPPENY 220

Query: 316 LVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDC 368
           L+IS + NVCLGILNGSE  +G  NIIG+I MQ  MVIYDNEKQ+IGW   DC
Sbjct: 221 LIISEKGNVCLGILNGSEIGLGNTNIIGDISMQGLMVIYDNEKQQIGWVRSDC 273

Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. This degradation is a characteristic of programmed cell death. Nucellins are plant aspartic proteases specifically expressed in nucellar cells during degradation. The enzyme is characterized by having two aspartic protease catalytic site motifs, the Asp-Thr-Gly-Ser in the N-terminal and Asp-Ser-Gly-Ser in the C-terminal region, and two other regions nearly identical to two regions of plant aspartic proteases. Aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. Although the three-dimensional structures of the two lobes are very similar, the amino acid sequences are more divergent, except for the conserved catalytic site motif. Length = 273
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 378
PLN03146431 aspartyl protease family protein; Provisional 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.95
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.9
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.88
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 98.13
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 97.41
PF1365090 Asp_protease_2: Aspartyl protease 96.88
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.89
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 93.4
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 93.06
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 92.36
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 88.77
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 86.98
PF1365090 Asp_protease_2: Aspartyl protease 86.17
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 85.14
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 84.66
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 82.61
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 82.38
COG3577215 Predicted aspartyl protease [General function pred 81.49
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 80.59
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.7e-55  Score=423.96  Aligned_cols=329  Identities=27%  Similarity=0.529  Sum_probs=268.7

Q ss_pred             ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCC----cccCCchhccCCCCCCCCCCCCCCC
Q 017049           15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKN----IVPCSNPRCAALHWPNPPRCKHPND   90 (378)
Q Consensus        15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S----~v~c~~~~C~~~~~~~t~~~~~~~~   90 (378)
                      +.|+++|.||||||++.|++||||+++||+|. +|..|..+..+.|||++|    .++|.++.|..++.  ...|... +
T Consensus        83 ~~Y~v~i~iGTPpq~~~vi~DTGS~l~Wv~C~-~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~--~~~c~~~-~  158 (431)
T PLN03146         83 GEYLMNISIGTPPVPILAIADTGSDLIWTQCK-PCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGN--QASCSDE-N  158 (431)
T ss_pred             ccEEEEEEcCCCCceEEEEECCCCCcceEcCC-CCcccccCCCCcccCCCCCCCcccCCCCcccccCCC--CCCCCCC-C
Confidence            79999999999999999999999999999999 999999888899999999    48999999987653  3346543 5


Q ss_pred             CCeeEeEeCCCCeEEEEEEEEEEEEeecCC-ccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCCChHHHHHhhcCCc
Q 017049           91 QCDYEIEYGDGGSSIGALVTDLFPLRFSNG-SVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLI  169 (378)
Q Consensus        91 ~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g-~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~l~~~~~i  169 (378)
                      .|.|.+.|+||+.+.|.+++|+|+|++..+ ...++++.|||++...+.  +. ...+||||||++..+++.||...  +
T Consensus       159 ~c~y~i~Ygdgs~~~G~l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g~--f~-~~~~GilGLG~~~~Sl~sql~~~--~  233 (431)
T PLN03146        159 TCTYSYSYGDGSFTKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGGT--FD-EKGSGIVGLGGGPLSLISQLGSS--I  233 (431)
T ss_pred             CCeeEEEeCCCCceeeEEEEEEEEeccCCCCcceeCCEEEeCCCCCCCC--cc-CCCceeEecCCCCccHHHHhhHh--h
Confidence            799999999997789999999999954322 245789999999876432  21 25799999999999999999764  5


Q ss_pred             cCeEEEEeCC-----CCceeEEeCCCCCCCC-CceeeeCccCCCCCcceEeeeeEEEeCCEEeccCC--------CcEEE
Q 017049          170 RNVIGHCIGQ-----NGRGVLFLGDGKVPSS-GVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKD--------LTLIF  235 (378)
Q Consensus       170 ~~~fsl~l~~-----~~~G~l~fGd~~~~~g-~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~--------~~~ii  235 (378)
                      .++||+||.+     ...|.|+||..+++.+ .+.|+|+..... ..+|.|.|++|+||++.+..+.        ..+||
T Consensus       234 ~~~FSycL~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~-~~~y~V~L~gIsVgg~~l~~~~~~~~~~~~g~~ii  312 (431)
T PLN03146        234 GGKFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDP-DTFYYLTLEAISVGSKKLPYTGSSKNGVEEGNIII  312 (431)
T ss_pred             CCcEEEECCCCCCCCCCcceEEeCCccccCCCCceEcccccCCC-CCeEEEeEEEEEECCEECcCCccccccCCCCcEEE
Confidence            5699999963     2479999996555554 589999986421 3789999999999999876532        47999


Q ss_pred             ecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcceEEEeCCCce
Q 017049          236 DSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAY  315 (378)
Q Consensus       236 DSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~l~~~~~  315 (378)
                      ||||++++||.++|++|.+++...+......  .....+..||....      ...+|.|+|+|++    ..+.|++++|
T Consensus       313 DSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~--~~~~~~~~C~~~~~------~~~~P~i~~~F~G----a~~~l~~~~~  380 (431)
T PLN03146        313 DSGTTLTLLPSDFYSELESAVEEAIGGERVS--DPQGLLSLCYSSTS------DIKLPIITAHFTG----ADVKLQPLNT  380 (431)
T ss_pred             eCCccceecCHHHHHHHHHHHHHHhccccCC--CCCCCCCccccCCC------CCCCCeEEEEECC----CeeecCccee
Confidence            9999999999999999999999887532111  12223557886321      1358999999974    7899999999


Q ss_pred             EEEeCCccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCCCCc
Q 017049          316 LVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNT  370 (378)
Q Consensus       316 ~~~~~~~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~c~~  370 (378)
                      ++...++..|++++...     +.+|||+.|||++|++||.+++|||||+.+|+.
T Consensus       381 ~~~~~~~~~Cl~~~~~~-----~~~IlG~~~q~~~~vvyDl~~~~igFa~~~C~~  430 (431)
T PLN03146        381 FVKVSEDLVCFAMIPTS-----SIAIFGNLAQMNFLVGYDLESKTVSFKPTDCTK  430 (431)
T ss_pred             EEEcCCCcEEEEEecCC-----CceEECeeeEeeEEEEEECCCCEEeeecCCcCc
Confidence            99777777899887542     369999999999999999999999999999975

>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query378
1am5_A324 The Crystal Structure And Proposed Amino Acid Seque 2e-06
1t6e_X381 Crystal Structure Of The Triticum Aestivum Xylanase 1e-05
3hd8_A389 Crystal Structure Of The Triticum Aestivum Xylanase 1e-05
2b42_A381 Crystal Structure Of The Triticum Xylanse Inhibitor 3e-04
1uh7_A325 Crystal Structure Of Rhizopuspepsin At Ph 4.6 Lengt 5e-04
3apr_E325 Binding Of A Reduced Peptide Inhibitor To The Aspar 5e-04
>pdb|1AM5|A Chain A, The Crystal Structure And Proposed Amino Acid Sequence Of A Pepsin From Atlantic Cod (Gadus Morhua) Length = 324 Back     alignment and structure 
Iteration: 1

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 80/363 (22%), Positives = 142/363 (39%), Gaps = 76/363 (20%)
Query: 21  LTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWP 80
           +++G PP+ F   FDTGS   WV   + C+        ++KP ++       +       
Sbjct: 18  ISIGTPPESFKVIFDTGSSNLWVSS-SHCSAQACSNHNKFKPRQSSTYVETGKTV----- 71
Query: 81  NPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGP 140
                         ++ YG GG   G L  D   +    GS  N  L    G +Q  PGP
Sbjct: 72  --------------DLTYGTGGMR-GILGQDT--VSVGGGSDPNQEL----GESQTEPGP 110
Query: 141 L---SPPDTAGVLGL------GRGRISIVSQLREYGLI-RNVIGHCI---GQNGRGVLFL 187
               +P D  G+LGL        G + +   +    L+ +++    +   G NG  V+  
Sbjct: 111 FQAAAPFD--GILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLG 168
Query: 188 G-DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTS 246
           G D    +  + W P+       K++ +    +  +G++   +    I D+G      TS
Sbjct: 169 GVDNSHYTGSIHWIPVTAE----KYWQVALDGITVNGQTAACEGCQAIVDTG------TS 218
Query: 247 RVYQEIVSL--IMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRN 304
           ++   + +L  IM+D+  +                   + +G          ++FT   N
Sbjct: 219 KIVAPVSALANIMKDIGAS---------------ENQGEMMGNCASVQSLPDITFT--IN 261
Query: 305 SVRLVVPPEAYLVISGRKNVCLGIL--NGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIG 362
            V+  +PP AY  I G +  C   L  +G  +   E  I G++F+++   IYD    ++G
Sbjct: 262 GVKQPLPPSAY--IEGDQAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVG 319
Query: 363 WKP 365
           + P
Sbjct: 320 FAP 322
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor I Length = 381 Back     alignment and structure
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase Length = 389 Back     alignment and structure
>pdb|2B42|A Chain A, Crystal Structure Of The Triticum Xylanse Inhibitor-I In Complex With Bacillus Subtilis Xylanase Length = 381 Back     alignment and structure
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6 Length = 325 Back     alignment and structure
>pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic Proteinase From Rhizopus Chinensis. Implications For A Mechanism Of Action Length = 325 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query378
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 4e-71
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 3e-68
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 5e-66
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 1e-17
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 8e-17
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 3e-16
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 6e-16
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 1e-14
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 4e-13
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 2e-12
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 4e-12
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 3e-11
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 6e-11
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 6e-11
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 7e-11
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 7e-11
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 1e-10
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 1e-10
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 1e-10
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 2e-10
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 3e-10
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 1e-09
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 1e-09
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 2e-09
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 4e-09
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 5e-09
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 7e-09
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 1e-08
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 1e-08
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 1e-08
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 1e-06
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 4e-05
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 9e-05
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
 Score =  227 bits (579), Expect = 4e-71
 Identities = 62/398 (15%), Positives = 123/398 (30%), Gaps = 43/398 (10%)

Query: 15  SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRC 74
             +   +    P    +   D G    WV CD      T  P +            +  C
Sbjct: 20  LQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQC--SLSGSIAC 77

Query: 75  AALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLT-----F 129
                   P C + N    +        ++ G +  D+  +  ++GS     +T     F
Sbjct: 78  GDCFNGPRPGC-NNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIF 136

Query: 130 GCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIG--QNGRGVLFL 187
            C     +          G+ GLGR RI++ SQ       +     C+    +   V+  
Sbjct: 137 SCAPT--SLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIF 194

Query: 188 GDGK--------VPSSGVAWTPMLQNSADLK----------HYILGPAELLYSGKSCGLK 229
           G+          V    + +TP+L N                Y +G   +  + K   L 
Sbjct: 195 GNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALN 254

Query: 230 DLTL----------IFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWR 279
              L             +   Y    + +Y+ +    +++     +           C+ 
Sbjct: 255 TSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFS 314

Query: 280 GPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGEN 339
                  ++      + L    +  SV   +     +V      VCLG+++G    +  +
Sbjct: 315 TDNILSTRLGPSVPSIDLVL--QSESVVWTITGSNSMVYINDNVVCLGVVDGGS-NLRTS 371

Query: 340 NIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLNHF 377
            +IG   ++D +V +D    R+G+      +  +  +F
Sbjct: 372 IVIGGHQLEDNLVQFDLATSRVGFSGTLLGSRTTCANF 409
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query378
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.83
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.61
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 93.19
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 83.46
2hs1_A99 HIV-1 protease; ultra-high resolution active site 83.07
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 82.69
3ec0_A99 Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1 80.09
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=6.5e-58  Score=440.55  Aligned_cols=347  Identities=18%  Similarity=0.349  Sum_probs=274.5

Q ss_pred             ceeeeeeeec-----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCC
Q 017049            5 WIEFFFFPIF-----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHW   79 (378)
Q Consensus         5 ~~~~~~~pl~-----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~   79 (378)
                      ..+++.+||.     +.|+++|.||||||++.|+|||||+++||+|. +|   .  ....|.    .++|.++.|...+.
T Consensus         5 ~~~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~-~c---~--~Sst~~----~v~C~s~~C~~~~~   74 (413)
T 3vla_A            5 RPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD-QN---Y--VSSTYR----PVRCRTSQCSLSGS   74 (413)
T ss_dssp             CCSEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SS---C--CCTTCE----ECBTTSHHHHHTTC
T ss_pred             CCccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC-CC---C--CCCCcC----ccCCCccccccccc
Confidence            4678999999     89999999999999999999999999999988 54   2  111222    48999999987654


Q ss_pred             CC--------CCCCCCCCCCCeeEeEe-CCCCeEEEEEEEEEEEEeecCCc-----cccccEEEeeeeecCCCCCCCCCC
Q 017049           80 PN--------PPRCKHPNDQCDYEIEY-GDGGSSIGALVTDLFPLRFSNGS-----VFNVPLTFGCGYNQHNPGPLSPPD  145 (378)
Q Consensus        80 ~~--------t~~~~~~~~~~~~~~~y-~~g~~~~G~~~~D~v~l~~~~g~-----~~~~~~~fg~~~~~~~~~~~~~~~  145 (378)
                      ..        ...|.  ++.|.|.+.| ++++.+.|.+++|+|+|+..+|.     +.++++.|||+........  ...
T Consensus        75 ~~~~~c~s~~~~~c~--~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~--~~~  150 (413)
T 3vla_A           75 IACGDCFNGPRPGCN--NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNL--ASG  150 (413)
T ss_dssp             CEEECCSSCCBTTBC--SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTS--CTT
T ss_pred             CCCcccccCCCCCCC--CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCc--ccc
Confidence            31        11233  3679999999 48778999999999999765543     5678999999998622221  256


Q ss_pred             cceEEeeCCCCChHHHHHhhcCCccCeEEEEeCC--CCceeEEeCCC--C-----CCCCC-ceeeeCccCCCC-------
Q 017049          146 TAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQ--NGRGVLFLGDG--K-----VPSSG-VAWTPMLQNSAD-------  208 (378)
Q Consensus       146 ~~GilGLg~~~~s~~~~l~~~~~i~~~fsl~l~~--~~~G~l~fGd~--~-----~~~g~-l~~~p~~~~~~~-------  208 (378)
                      .+||||||++..+++.||.+++.++++||+||.+  +..|.|+||+.  .     ++.++ ++|+|+......       
T Consensus       151 ~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~  230 (413)
T 3vla_A          151 VVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQ  230 (413)
T ss_dssp             CCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCT
T ss_pred             cccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccc
Confidence            8999999999999999999998889999999986  46899999932  2     25678 999999876321       


Q ss_pred             ---CcceEeeeeEEEeCCEEeccC----------CCcEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCC
Q 017049          209 ---LKHYILGPAELLYSGKSCGLK----------DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLP  275 (378)
Q Consensus       209 ---~~~w~v~l~~i~v~~~~~~~~----------~~~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~  275 (378)
                         ..+|.|.|++|+||++.+...          ...+||||||++++||.++|++|.+++.+.+....+........+.
T Consensus       231 ~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~  310 (413)
T 3vla_A          231 GEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFG  310 (413)
T ss_dssp             TCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCS
T ss_pred             cCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCc
Confidence               269999999999999998654          3689999999999999999999999999876421233222334456


Q ss_pred             ceeeCCccCccccccccccEEEEEcCCCcceEEEeCCCceEEEeCCccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEe
Q 017049          276 ICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYD  355 (378)
Q Consensus       276 ~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~l~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD  355 (378)
                      .|+..++.........+|+|+|+|+++  ++.|.|++++|+++..++..|++++.... ...+.||||+.|||++|+|||
T Consensus       311 ~C~~~~~~~~~~~~~~lP~i~f~f~g~--~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~-~~~~~~IlGd~fl~~~~vvfD  387 (413)
T 3vla_A          311 ACFSTDNILSTRLGPSVPSIDLVLQSE--SVVWTITGSNSMVYINDNVVCLGVVDGGS-NLRTSIVIGGHQLEDNLVQFD  387 (413)
T ss_dssp             CEEECTTCCEETTEECCCCEEEECSST--TCEEEECHHHHEEEEETTEEEECEEEEES-SCSSSEEECHHHHTTEEEEEE
T ss_pred             ceeccCCccccccccCCCcEEEEEcCC--cEEEEeCccceEEEeCCCcEEEEEEecCC-CcccceeEehhhhcCeEEEEE
Confidence            799876543323345799999999874  48999999999997666778998776432 123589999999999999999


Q ss_pred             CCCCEEeeecCCC
Q 017049          356 NEKQRIGWKPEDC  368 (378)
Q Consensus       356 ~~~~rigfa~~~c  368 (378)
                      ++++|||||++.+
T Consensus       388 ~~~~riGfa~~~~  400 (413)
T 3vla_A          388 LATSRVGFSGTLL  400 (413)
T ss_dssp             TTTTEEEEEEEGG
T ss_pred             CCCCEEEEEEecc
Confidence            9999999999643
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 378
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 1e-45
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 1e-31
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 1e-29
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 6e-28
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 7e-28
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 2e-27
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 3e-27
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 4e-26
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 7e-26
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 9e-25
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 2e-24
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 2e-24
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 5e-24
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 9e-24
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 2e-23
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 3e-23
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 4e-23
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 1e-21
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 3e-21
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 1e-20
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 1e-18
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 2e-17
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  158 bits (400), Expect = 1e-45
 Identities = 65/384 (16%), Positives = 116/384 (30%), Gaps = 49/384 (12%)

Query: 15  SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRC 74
           S + +    G          D    L W  CD                    +PCS+P C
Sbjct: 14  SLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAE-------------IPCSSPTC 55

Query: 75  AALHWPNPPRCKHP--------NDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVP 126
              +    P C  P             Y      G  + G+L    F    ++GS     
Sbjct: 56  LLANAYPAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSK 115

Query: 127 LTFGCGYN--QHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGV 184
           +  G              P  + GV GL    +++ +Q+     + N    C+   G GV
Sbjct: 116 VNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGV 175

Query: 185 LFLGDGKVP----SSGVAWTPMLQNSADLKHYI----LGPAELLYSGKSCGLKDLTLIFD 236
              G G VP    +  + +TP++       HYI    +   +         L    ++  
Sbjct: 176 AIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLS 235

Query: 237 SGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKT------LPICWRGPFKALGQVTE 290
           +   Y      VY+ ++    + L       AP  +         +C+            
Sbjct: 236 TRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGY 295

Query: 291 YFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGEN----NIIGEIF 346
               + L            +  +  +V   +   C+  +       G+      I+G   
Sbjct: 296 AVPNVQLGL---DGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQ 352

Query: 347 MQDKMVIYDNEKQRIGWKPEDCNT 370
           M+D ++ +D EK+R+G+      T
Sbjct: 353 MEDFVLDFDMEKKRLGFSRLPHFT 376
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query378
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
d2fmba_104 EIAV protease {Equine infectious anemia virus [Tax 80.59
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Acid protease
species: Bread mold (Rhizopus chinensis) [TaxId: 4843]

Probab=100.00  E-value=9.9e-54  Score=398.64  Aligned_cols=302  Identities=22%  Similarity=0.381  Sum_probs=252.3

Q ss_pred             eeeec-----ceEEEEEeecCCCcEEEEEEecCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCchhccCCCCCCCCC
Q 017049           10 FFPIF-----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPR   84 (378)
Q Consensus        10 ~~pl~-----~~y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~~c~~c~~~~~~~y~~~~S~v~c~~~~C~~~~~~~t~~   84 (378)
                      .+||.     ..|+++|.||||||++.|+|||||+++||+|. +|..|..+ ++.|+|++|.               |++
T Consensus         5 ~vpl~~~~~d~~Y~~~i~iGtP~Q~~~v~vDTGS~~~Wv~~~-~C~~c~~~-~~~y~~~~Ss---------------T~~   67 (325)
T d2apra_           5 TVPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIAST-LCTNCGSG-QTKYDPNQSS---------------TYQ   67 (325)
T ss_dssp             EEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCSSCCTT-SCCBCGGGCT---------------TCE
T ss_pred             EEEeEecCCCcEEEEEEEEeCCCEEEEEEEECCCCcEEEeCC-CCCccccC-CCccCcccCC---------------cee
Confidence            46776     47999999999999999999999999999999 99999754 4679999993               666


Q ss_pred             CCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCccccccEEEeeeeecCCCCCCCCCCcceEEeeCCCC-------C
Q 017049           85 CKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR-------I  157 (378)
Q Consensus        85 ~~~~~~~~~~~~~y~~g~~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GilGLg~~~-------~  157 (378)
                      +    ..|.+.+.|++|+.+.|.+++|++++    ++.+++++.|+++........  ....+||||||+..       .
T Consensus        68 ~----~~~~~~~~y~~g~~~~G~~~~D~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~GilGlg~~~~~~~~~~~  137 (325)
T d2apra_          68 A----DGRTWSISYGDGSSASGILAKDNVNL----GGLLIKGQTIELAKREAASFA--SGPNDGLLGLGFDTITTVRGVK  137 (325)
T ss_dssp             E----EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHH--TSSCSEEEECSCGGGCSSTTCC
T ss_pred             E----CCeEEEEEeCCCCeEEEEEEeeeEEe----eeeeccCcceeeeeeeccccc--ccccCcccccccccccccccCC
Confidence            5    77899999999988999999999999    888889999999887633222  24689999999733       5


Q ss_pred             hHHHHHhhcCCc-cCeEEEEeCC---CCceeEEeC--CCCCCCCCceeeeCccCCCCCcceEeeeeEEEeCCEEeccCCC
Q 017049          158 SIVSQLREYGLI-RNVIGHCIGQ---NGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDL  231 (378)
Q Consensus       158 s~~~~l~~~~~i-~~~fsl~l~~---~~~G~l~fG--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~  231 (378)
                      +++.++++++.| +++||++|.+   ...|.|+||  |++++.+++.|+|+....   .+|.|.++++.+++..+.. ..
T Consensus       138 ~~~~~l~~~g~i~~~~fs~~l~~~~~~~~g~l~~Gg~d~~~~~~~~~~~~~~~~~---~~~~v~l~~i~i~~~~~~~-~~  213 (325)
T d2apra_         138 TPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSR---GWWGITVDRATVGTSTVAS-SF  213 (325)
T ss_dssp             CHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTT---SSCEEEECEEEETTEEEEC-CE
T ss_pred             cchhHHHhhccccceeEEEEeccCCCCCCeEEEecCCCchhhccceeeEeecCCC---ceEEEEEeeEEECCEeecc-ee
Confidence            789999999999 9999999974   357999999  888999999999998763   7999999999999998754 57


Q ss_pred             cEEEecCCcceeeChHHHHHHHHHHHHHhcCCCCCCCCCCCCCCceeeCCccCccccccccccEEEEEcCCCcceEEEeC
Q 017049          232 TLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVP  311 (378)
Q Consensus       232 ~~iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~P~l~~~f~~~~~~~~~~l~  311 (378)
                      .++|||||++++||.+++++|.+.+++....            ..+|..+|+.     ..+|+|+|+|++    .++.|+
T Consensus       214 ~~iiDSGt~~~~lp~~~~~~l~~~~~~~~~~------------~~~~~~~C~~-----~~~p~i~f~f~g----~~~~i~  272 (325)
T d2apra_         214 DGILDTGTTLLILPNNIAASVARAYGASDNG------------DGTYTISCDT-----SAFKPLVFSING----ASFQVS  272 (325)
T ss_dssp             EEEECTTCSSEEEEHHHHHHHHHHHTCEECS------------SSCEEECSCG-----GGCCCEEEEETT----EEEEEC
T ss_pred             eeeccCCCccccCCHHHHHHHHHHhCCcccC------------CCceeecccC-----CCCCcEEEEECC----EEEEEC
Confidence            8999999999999999999999998654321            1134445542     247899999964    899999


Q ss_pred             CCceEEEeCCccEEEEEEcCCCCCCCCceeEcceeeeeeEEEEeCCCCEEeeecCC
Q 017049          312 PEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPED  367 (378)
Q Consensus       312 ~~~~~~~~~~~~~C~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfa~~~  367 (378)
                      +++|+++..++ .|+..+...   ..+.+|||.+|||++|+|||+|++||||||++
T Consensus       273 ~~~y~~~~~~~-~C~~~i~~~---~~~~~iLG~~flr~~y~vfD~~~~~IGfAp~a  324 (325)
T d2apra_         273 PDSLVFEEFQG-QCIAGFGYG---NWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA  324 (325)
T ss_dssp             GGGGEEEEETT-EEEESEEEE---SSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             hHHeEEecCCC-EEEEEEccC---CCCCEEECHHHhCcEEEEEECCCCEEeEEEcC
Confidence            99999876554 475444333   24679999999999999999999999999985
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d2fmba_ b.50.1.1 (A:) EIAV protease {Equine infectious anemia virus [TaxId: 11665]} Back     information, alignment and structure