Citrus Sinensis ID: 017067
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 378 | 2.2.26 [Sep-21-2011] | |||||||
| P40119 | 254 | Protein CbbY, chromosomal | yes | no | 0.309 | 0.460 | 0.352 | 8e-10 | |
| Q04541 | 254 | Protein CbbY, plasmid OS= | yes | no | 0.309 | 0.460 | 0.344 | 1e-09 | |
| P95649 | 230 | Protein CbbY OS=Rhodobact | yes | no | 0.296 | 0.486 | 0.303 | 5e-06 | |
| O33513 | 227 | Protein CbbY OS=Rhodobact | yes | no | 0.296 | 0.493 | 0.336 | 0.0001 |
| >sp|P40119|CBBYC_CUPNH Protein CbbY, chromosomal OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3 | Back alignment and function desciption |
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Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A++ +VDG L D + QAFN AF ++GLD W AP+YT LL K AG ++R++ +
Sbjct: 3 ALIFDVDGTLADT-ESAHLQAFNAAFAEVGLDW-YWDAPLYTRLL-KVAGGKERLM--HY 57
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
R+ P + K + V K E + + PLRPG+ +D+A G+PL +
Sbjct: 58 WRMVDPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIDEAGEAGLPLAI 117
Query: 206 LT 207
T
Sbjct: 118 AT 119
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Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) |
| >sp|Q04541|CBBYP_CUPNH Protein CbbY, plasmid OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYP PE=3 SV=1 | Back alignment and function description |
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Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A++ +VDG L D + QAFN AF ++GLD +W AP+YT LL K AG ++R++ +
Sbjct: 3 ALIFDVDGTLADT-ETAHLQAFNAAFAEVGLDW-HWDAPLYTRLL-KVAGGKERLM--HY 57
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
R+ P + K + V K E + + PLRPG+ + +A G+PL +
Sbjct: 58 WRMVDPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIAEAGEAGLPLAI 117
Query: 206 LT 207
T
Sbjct: 118 AT 119
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Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) |
| >sp|P95649|CBBY_RHOSH Protein CbbY OS=Rhodobacter sphaeroides GN=cbbY PE=3 SV=1 | Back alignment and function description |
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Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A+L +VDG L + +R+AFN F LG+D W Y +LL + G E R+
Sbjct: 4 AILFDVDGTLAETEEL-HRRAFNETFAALGVDW-FWDREEYRELLTTTGGKE-RIARFLR 60
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
++ G P +P + ++ + K +A + LRPG+ D + +A GI L V
Sbjct: 61 HQKGDPAPLP-------IADIHRAKTERFVALMAEGEIALRPGIADLIAEAKRAGIRLAV 113
Query: 206 LT 207
T
Sbjct: 114 AT 115
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Rhodobacter sphaeroides (taxid: 1063) |
| >sp|O33513|CBBY_RHOCA Protein CbbY OS=Rhodobacter capsulatus GN=cbbY PE=3 SV=1 | Back alignment and function description |
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Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A++ +VDG L + +RQAFN F GLD W+ Y LLR + G E RM
Sbjct: 5 ALIFDVDGTLAETEEV-HRQAFNETFAAQGLDW-YWSKEDYRTLLRTTGGKE-RMAKHRE 61
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
N +G S P++ K + ++ + K E +AS L PGV + +D A G+ L +
Sbjct: 62 N-LG---SGPSDAK---IADLHKAKTQRYVEIIASGQVGLLPGVAELIDRAKASGLRLAI 114
Query: 206 LT 207
T
Sbjct: 115 AT 116
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Rhodobacter capsulatus (taxid: 1061) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 378 | ||||||
| 224134306 | 380 | predicted protein [Populus trichocarpa] | 0.981 | 0.976 | 0.665 | 1e-133 | |
| 255549546 | 340 | 2-deoxyglucose-6-phosphate phosphatase, | 0.888 | 0.988 | 0.688 | 1e-129 | |
| 297791273 | 372 | hypothetical protein ARALYDRAFT_494462 [ | 0.960 | 0.975 | 0.597 | 1e-126 | |
| 356555851 | 374 | PREDICTED: uncharacterized protein LOC10 | 0.814 | 0.823 | 0.701 | 1e-125 | |
| 225465107 | 376 | PREDICTED: uncharacterized protein LOC10 | 0.941 | 0.946 | 0.628 | 1e-124 | |
| 296081418 | 367 | unnamed protein product [Vitis vinifera] | 0.944 | 0.972 | 0.624 | 1e-124 | |
| 30694711 | 372 | CbbY protein-like protein [Arabidopsis t | 0.962 | 0.978 | 0.588 | 1e-124 | |
| 356532993 | 371 | PREDICTED: uncharacterized protein LOC10 | 0.817 | 0.832 | 0.692 | 1e-123 | |
| 449433515 | 374 | PREDICTED: uncharacterized protein LOC10 | 0.870 | 0.879 | 0.649 | 1e-123 | |
| 115489704 | 371 | Os12g0630700 [Oryza sativa Japonica Grou | 0.777 | 0.792 | 0.691 | 1e-119 |
| >gi|224134306|ref|XP_002321787.1| predicted protein [Populus trichocarpa] gi|222868783|gb|EEF05914.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 257/386 (66%), Positives = 305/386 (79%), Gaps = 15/386 (3%)
Query: 1 MKTSSTSCSLLNSLRFSTAITVSKKSYY--HYQATQLRNHNCLSPFPS------FSSTFP 52
M+ +++SCS+L+ LR S +Y+ HY T RN + S + FSSTF
Sbjct: 1 MEAAASSCSILHPLR-------SSSNYHSKHYTETPPRNSSSSSCCNNLYLGLPFSSTFL 53
Query: 53 RNYNFHGKCLHVNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQ 112
RNY F GK + N F+ F + QNP + AVLLEVDGVL+DAYR GNR+AFNVAFQ
Sbjct: 54 RNYTFPGKFVQQNLFTTFCLTPSSSKQNPSTEFAVLLEVDGVLIDAYRLGNRRAFNVAFQ 113
Query: 113 KLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKN 172
KLGLDCANWT PIY DL+RKS GDE+RMLVLFFNRIGWPTS+PT+EK AF+K+VL+EKKN
Sbjct: 114 KLGLDCANWTQPIYQDLVRKSDGDEERMLVLFFNRIGWPTSLPTSEKGAFIKSVLREKKN 173
Query: 173 ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232
ALDEF+ASK + LRPGVEDF+DDA N+GIP+++LTAYGKS ++IARS+++KLG ERISK+
Sbjct: 174 ALDEFVASKSSLLRPGVEDFIDDASNKGIPVVILTAYGKSVEKIARSIIDKLGHERISKL 233
Query: 233 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDID 292
KIVGNEEVE+SLYGQ V KGI SG +E+LA EA KAVSAQKQ+IAEEVASMLKLSV +D
Sbjct: 234 KIVGNEEVEKSLYGQLVHHKGILSGTNEELAKEAMKAVSAQKQKIAEEVASMLKLSVSLD 293
Query: 293 TSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAE 352
+SS ESL K VAALRAGAEYA V NC LIAGSQSGVAGA++IGMPCVV+RSS TSR +
Sbjct: 294 SSSSESLQKTVAALRAGAEYAGVSVNNCVLIAGSQSGVAGAEQIGMPCVVLRSSSTSRTQ 353
Query: 353 FPSANAVMDGFGGADLTISKLRHSQW 378
FPSA A +DGFGG DLTISKL +W
Sbjct: 354 FPSAKATVDGFGGPDLTISKLLDKRW 379
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255549546|ref|XP_002515825.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] gi|223545054|gb|EEF46567.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/340 (68%), Positives = 277/340 (81%), Gaps = 4/340 (1%)
Query: 6 TSCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCLHVN 65
+SCS+L SLR S ++ + + Q T RN N PSFS +FPRNY GK L N
Sbjct: 4 SSCSILYSLRLSNNF-INYNNKFCSQ-TLPRNCNSFCLGPSFSFSFPRNYKIPGKFLQPN 61
Query: 66 PFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI 125
++F+SSS QNP +LAVLLEVDGVL+D YR GNRQAFN+AFQKLGLDCANWT PI
Sbjct: 62 GLASFTSSS--PDQNPSLELAVLLEVDGVLMDVYRLGNRQAFNIAFQKLGLDCANWTEPI 119
Query: 126 YTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPL 185
Y DL+RKSAGDE+RMLVLFFNRIGWPTS+PT+EK FV N+LQEKKNA+DEF+ SK APL
Sbjct: 120 YLDLVRKSAGDEERMLVLFFNRIGWPTSLPTSEKGTFVNNILQEKKNAMDEFVMSKSAPL 179
Query: 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245
RPG EDF+DDA NEGIP+++LT+Y KS ++IARS+V+KLG ERI KIKIVG+ EV++SLY
Sbjct: 180 RPGAEDFIDDASNEGIPVVILTSYNKSEEKIARSIVDKLGPERILKIKIVGDAEVKQSLY 239
Query: 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 305
GQ VLGKG+ SG+DEQLA EARKA SA++Q+IAEEVASMLKLSV IDTSS ESL+KIVAA
Sbjct: 240 GQLVLGKGVLSGLDEQLAKEARKAASAERQKIAEEVASMLKLSVQIDTSSSESLEKIVAA 299
Query: 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345
LRAGAEYA V NC LIAGSQSGV+ A++IGMPC+V+RS
Sbjct: 300 LRAGAEYAGLRVSNCVLIAGSQSGVSAAEKIGMPCIVLRS 339
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297791273|ref|XP_002863521.1| hypothetical protein ARALYDRAFT_494462 [Arabidopsis lyrata subsp. lyrata] gi|297309356|gb|EFH39780.1| hypothetical protein ARALYDRAFT_494462 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/370 (59%), Positives = 285/370 (77%), Gaps = 7/370 (1%)
Query: 7 SCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNC-LSPFPSFSSTFPRNYNFHGKCLHVN 65
SCS+L++L+ S +K S + ++ +H+ F SFS+ FP GKCL +
Sbjct: 5 SCSILDNLQLSC----TKTSLFTQYLSEPSSHDTGRRNFLSFSN-FPGKSQILGKCLRLQ 59
Query: 66 PFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI 125
FS+ S+ + NP +LAV+LEVDGV++D + NRQAFNVAFQKLGLDCANW P+
Sbjct: 60 RFSSICLSASREDVNPSEELAVILEVDGVMIDTWS-SNRQAFNVAFQKLGLDCANWPEPV 118
Query: 126 YTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPL 185
Y+DLLRK A DE++ML+L+FN+IGWP+S+PT+EK +FVK+VL+EKKNA+DEFL SK PL
Sbjct: 119 YSDLLRKGAADEEKMLLLYFNQIGWPSSLPTSEKASFVKSVLREKKNAMDEFLMSKSLPL 178
Query: 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245
R GV++F+D+AY E +P+ ++TAY KSGD++A S+VE LG ER+ +K++G EVE+S+Y
Sbjct: 179 RSGVQEFIDNAYTERVPVAIVTAYCKSGDKVALSIVEMLGQERLPNVKVIGENEVEQSMY 238
Query: 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 305
GQ VLGKG+SS ++EQL E +KA SA+KQ IAEEVASMLKLSVDIDT+S E L+KIV A
Sbjct: 239 GQLVLGKGVSSSLEEQLVKEVKKAASAEKQRIAEEVASMLKLSVDIDTTSSERLEKIVVA 298
Query: 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGG 365
LRA AE+ PV+NC L+AGSQ GV+ A+ IGMPCVVMRSSLT+R EFPSA VMDGFGG
Sbjct: 299 LRAAAEHIGLPVKNCVLVAGSQPGVSAAKMIGMPCVVMRSSLTARGEFPSAKGVMDGFGG 358
Query: 366 ADLTISKLRH 375
ADLTI KLRH
Sbjct: 359 ADLTIPKLRH 368
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Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555851|ref|XP_003546243.1| PREDICTED: uncharacterized protein LOC100800683 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/308 (70%), Positives = 263/308 (85%)
Query: 67 FSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIY 126
SA SSS H + + D+AVLLEVDGVL+D++R GNR AFN AF+KLGLDCANWT P+Y
Sbjct: 56 ISASSSSEYHHNSSSSPDIAVLLEVDGVLMDSHRVGNRLAFNKAFEKLGLDCANWTEPVY 115
Query: 127 TDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLR 186
+DL ++SAGDE++M+ L+FNRIGWP+S+PTNE+ F K VLQ+K+ AL+EF+ SK PLR
Sbjct: 116 SDLSKRSAGDEEKMVFLYFNRIGWPSSLPTNEQGLFAKRVLQQKEKALEEFVMSKSLPLR 175
Query: 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 246
PG+E F+DDAYNEG+P+++LTAYGKSGD I S++EKLG +R K+ IVGN+EVE+SLYG
Sbjct: 176 PGLEQFIDDAYNEGVPVVILTAYGKSGDNITGSIMEKLGDDRSIKVIIVGNKEVEQSLYG 235
Query: 247 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAAL 306
Q VLGK I+SG+DE+LA EA++AVSA+KQ +A+EVASMLKLSV+IDTSS ESL KIVAAL
Sbjct: 236 QLVLGKVIASGLDEELANEAKRAVSAEKQRLAKEVASMLKLSVEIDTSSSESLAKIVAAL 295
Query: 307 RAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366
RAGAEYA PV NC L+AGSQSGVAG ++GMPCVV+RSSLTSRAEFP ANA MDGFGGA
Sbjct: 296 RAGAEYAGIPVCNCVLVAGSQSGVAGGTQVGMPCVVLRSSLTSRAEFPLANATMDGFGGA 355
Query: 367 DLTISKLR 374
DLTISKLR
Sbjct: 356 DLTISKLR 363
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225465107|ref|XP_002271573.1| PREDICTED: uncharacterized protein LOC100253116 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/374 (62%), Positives = 286/374 (76%), Gaps = 18/374 (4%)
Query: 5 STSCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSST--FPRNYNFHGKCL 62
+ SCS+L+ L F T S ++ + TQL S P+FS+ FPR NF
Sbjct: 12 TVSCSVLHPLPFFD--TCSYNKHFQFLKTQL------SFLPTFSTNLHFPRK-NFP---- 58
Query: 63 HVNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWT 122
H N +AF S H++ NP ++LA+LLEV+GV+VD Y GNR AFN AF+KLGLDCANW
Sbjct: 59 HFNGLTAFRSLPPHNNPNPSQELAILLEVEGVIVDVYWMGNRNAFNTAFRKLGLDCANWP 118
Query: 123 APIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKD 182
P+Y DLLRKSAGDE+RML+LFFN+IGWPTSVPT+E+K F++NVL+EKKNALD+ L SK
Sbjct: 119 EPVYLDLLRKSAGDEERMLILFFNKIGWPTSVPTSEQKTFMQNVLREKKNALDDLLVSKG 178
Query: 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242
PLRPGVEDF+DDAYNEGIPL+VLT +S D++ R + +KLG ERISK+KIVGNEEVE+
Sbjct: 179 LPLRPGVEDFIDDAYNEGIPLLVLTPCCESEDKVRRFIADKLGPERISKVKIVGNEEVEQ 238
Query: 243 SLYGQFVL--GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLD 300
S YGQ +L GKG+ SGVDEQLA EA KAVSA+KQ IAEEVAS+LKL V+I + E+L
Sbjct: 239 SSYGQIILGIGKGLLSGVDEQLAKEAIKAVSAEKQRIAEEVASILKLKVEIGSGLHENLP 298
Query: 301 KIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVM 360
K +AAL AG+EYA PV NC LI GSQSGVAGA+R+GMP VV+ S S+AEFPSA+AV+
Sbjct: 299 KTIAALHAGSEYAGVPVNNCVLITGSQSGVAGAERVGMPYVVLHSR-ASQAEFPSASAVL 357
Query: 361 DGFGGADLTISKLR 374
DGFGGADLTISKLR
Sbjct: 358 DGFGGADLTISKLR 371
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296081418|emb|CBI16769.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/373 (62%), Positives = 283/373 (75%), Gaps = 16/373 (4%)
Query: 5 STSCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCL-H 63
+ SCS+L+ L F T S ++ + TQL SF TF N +F K H
Sbjct: 3 TVSCSVLHPLPFFD--TCSYNKHFQFLKTQL----------SFLPTFSTNLHFPRKNFPH 50
Query: 64 VNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA 123
N +AF S H++ NP ++LA+LLEV+GV+VD Y GNR AFN AF+KLGLDCANW
Sbjct: 51 FNGLTAFRSLPPHNNPNPSQELAILLEVEGVIVDVYWMGNRNAFNTAFRKLGLDCANWPE 110
Query: 124 PIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDA 183
P+Y DLLRKSAGDE+RML+LFFN+IGWPTSVPT+E+K F++NVL+EKKNALD+ L SK
Sbjct: 111 PVYLDLLRKSAGDEERMLILFFNKIGWPTSVPTSEQKTFMQNVLREKKNALDDLLVSKGL 170
Query: 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
PLRPGVEDF+DDAYNEGIPL+VLT +S D++ R + +KLG ERISK+KIVGNEEVE+S
Sbjct: 171 PLRPGVEDFIDDAYNEGIPLLVLTPCCESEDKVRRFIADKLGPERISKVKIVGNEEVEQS 230
Query: 244 LYGQFVL--GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDK 301
YGQ +L GKG+ SGVDEQLA EA KAVSA+KQ IAEEVAS+LKL V+I + E+L K
Sbjct: 231 SYGQIILGIGKGLLSGVDEQLAKEAIKAVSAEKQRIAEEVASILKLKVEIGSGLHENLPK 290
Query: 302 IVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMD 361
+AAL AG+EYA PV NC LI GSQSGVAGA+R+GMP VV+ S S+AEFPSA+AV+D
Sbjct: 291 TIAALHAGSEYAGVPVNNCVLITGSQSGVAGAERVGMPYVVLHSR-ASQAEFPSASAVLD 349
Query: 362 GFGGADLTISKLR 374
GFGGADLTISKLR
Sbjct: 350 GFGGADLTISKLR 362
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30694711|ref|NP_199330.2| CbbY protein-like protein [Arabidopsis thaliana] gi|44917581|gb|AAS49115.1| At5g45170 [Arabidopsis thaliana] gi|62321581|dbj|BAD95125.1| putative protein [Arabidopsis thaliana] gi|332007829|gb|AED95212.1| CbbY protein-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/369 (58%), Positives = 277/369 (75%), Gaps = 5/369 (1%)
Query: 7 SCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCLHVNP 66
SCS+LN+L+ S T Y +++ PF S FP GKCL +
Sbjct: 5 SCSILNNLQISCTKTSIFTQYLSERSSHDTGRRNFLPF----SNFPGKSQILGKCLRLQR 60
Query: 67 FSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIY 126
FS+ S+ + NP + AV+LEVD V++D + NRQAFNVAFQKLGLDCANW P+Y
Sbjct: 61 FSSICLSASREDVNPSEEFAVILEVDRVMIDTWS-SNRQAFNVAFQKLGLDCANWPEPVY 119
Query: 127 TDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLR 186
+DLLRK A DE++ML+L+FN+IGWP+S+PT+EK +FVK+VL+EKKNA+DEFL SK PLR
Sbjct: 120 SDLLRKGAADEEKMLLLYFNQIGWPSSLPTSEKASFVKSVLREKKNAMDEFLISKSLPLR 179
Query: 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 246
GV++F+D+AY E +P+ ++TAY KSGD++A S+VE LG ER+ +K++G+ EVE+S+YG
Sbjct: 180 SGVQEFIDNAYAEKVPVAIVTAYCKSGDKVALSIVEMLGQERLPNVKVIGDNEVEQSMYG 239
Query: 247 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAAL 306
Q VLGKG+SS ++EQL E +KA SA+KQ IAEEVASMLKLSVDIDT+S E L+KIV AL
Sbjct: 240 QLVLGKGVSSSLEEQLVKEVKKAASAEKQRIAEEVASMLKLSVDIDTTSSERLEKIVVAL 299
Query: 307 RAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366
RA AE+ PV NC L+AGSQ GV+ A+ IGMPCVVMRSSLT+R EFPSA VMDGFGGA
Sbjct: 300 RAAAEHIGLPVNNCVLVAGSQPGVSAAKMIGMPCVVMRSSLTARGEFPSAKGVMDGFGGA 359
Query: 367 DLTISKLRH 375
DLTI KLR+
Sbjct: 360 DLTIPKLRN 368
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356532993|ref|XP_003535053.1| PREDICTED: uncharacterized protein LOC100792632 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/312 (69%), Positives = 264/312 (84%), Gaps = 3/312 (0%)
Query: 67 FSAFSSSSGHDSQNPP---RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA 123
SA SS++ H+ N +DLAVLLEV GVL+D++R GNR AFN AF+KLGLDCANWT
Sbjct: 50 ISASSSTAEHNHPNSSSSSQDLAVLLEVQGVLMDSHRVGNRLAFNKAFEKLGLDCANWTE 109
Query: 124 PIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDA 183
P+Y+DL ++SAGDE++M+ L+FNRIGWP+S+PTNE+ F K VLQ+K+ AL+EF+ SK
Sbjct: 110 PVYSDLSKRSAGDEEKMVFLYFNRIGWPSSLPTNEQGLFAKRVLQQKEKALEEFVMSKSL 169
Query: 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
PLRPG+E F+DDAYNEGIP+++LTAY KSGD IARS++EKLG +R K+ IVGN+EVE+S
Sbjct: 170 PLRPGLEQFIDDAYNEGIPVVILTAYSKSGDNIARSIMEKLGDDRSIKVIIVGNKEVEQS 229
Query: 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIV 303
LYGQ V GK I+SG+DE+LA EA++AVSA+KQ +A+EVASMLKLSV+IDT S ESL KIV
Sbjct: 230 LYGQLVSGKVIASGLDEELAKEAKRAVSAEKQRLAKEVASMLKLSVEIDTGSSESLAKIV 289
Query: 304 AALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGF 363
AALRAGAEYA PV NC L+AGSQSGVAGA ++GMPCVV+RSSLTSRAEFP ANA MDGF
Sbjct: 290 AALRAGAEYAGIPVCNCVLVAGSQSGVAGATQVGMPCVVLRSSLTSRAEFPLANATMDGF 349
Query: 364 GGADLTISKLRH 375
GG DLTISKLR+
Sbjct: 350 GGVDLTISKLRN 361
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449433515|ref|XP_004134543.1| PREDICTED: uncharacterized protein LOC101206737 [Cucumis sativus] gi|449506776|ref|XP_004162845.1| PREDICTED: uncharacterized protein LOC101226823 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/331 (64%), Positives = 275/331 (83%), Gaps = 2/331 (0%)
Query: 49 STFPRNYNFH-GKCLHVNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAF 107
S F R+YNF L + +AFSSSS ++ +P ++LAVLLEV+GVLVDAYR NRQAF
Sbjct: 44 SVFSRSYNFIVDSSLRIRRLTAFSSSSSSNNDSP-QELAVLLEVEGVLVDAYRSTNRQAF 102
Query: 108 NVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVL 167
N AF+KLGLDCANWT P+Y+DL+RK+A +E+RML+++FNRIGWPTS+PTNEK++F+K+VL
Sbjct: 103 NEAFRKLGLDCANWTEPVYSDLVRKNAANEERMLIMYFNRIGWPTSLPTNEKESFIKSVL 162
Query: 168 QEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227
+EKK A DE + S+ PLRPGVEDF+D+A+NEGIP+I+LTAY KSG+ IARS++ KLG E
Sbjct: 163 REKKKASDELMVSQSLPLRPGVEDFIDNAHNEGIPVIILTAYSKSGEEIARSIINKLGPE 222
Query: 228 RISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKL 287
RISK+KIVGNEE+ +SLY +FV G+ SG++E+LA EA KA SA+KQ IA++VAS LKL
Sbjct: 223 RISKVKIVGNEEMRQSLYSEFVSGQAKQSGLEEELAKEAMKAASAEKQRIAKKVASALKL 282
Query: 288 SVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSL 347
SV+I+T+S ESLDKI+ ALRAG+E A PV NC L+AG+QSG+ GA+RIGMP +V+RSSL
Sbjct: 283 SVEINTTSSESLDKIICALRAGSELAGTPVSNCILVAGTQSGIDGAERIGMPRIVIRSSL 342
Query: 348 TSRAEFPSANAVMDGFGGADLTISKLRHSQW 378
TSRAEFPSANA+MDGFG LTI++LR W
Sbjct: 343 TSRAEFPSANAIMDGFGVGGLTITRLRQKTW 373
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|115489704|ref|NP_001067339.1| Os12g0630700 [Oryza sativa Japonica Group] gi|77557131|gb|ABA99927.1| CbbY protein, putative, expressed [Oryza sativa Japonica Group] gi|113649846|dbj|BAF30358.1| Os12g0630700 [Oryza sativa Japonica Group] gi|215695433|dbj|BAG90636.1| unnamed protein product [Oryza sativa Japonica Group] gi|222617524|gb|EEE53656.1| hypothetical protein OsJ_36962 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/295 (69%), Positives = 249/295 (84%), Gaps = 1/295 (0%)
Query: 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVL 143
D+AVLLEV+GVL D YRFGNRQAFNVAFQ LGLDCANWT PIY DL+RK++GDE+RML+L
Sbjct: 77 DIAVLLEVEGVLADVYRFGNRQAFNVAFQNLGLDCANWTEPIYADLVRKASGDEERMLLL 136
Query: 144 FFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPL 203
FFNRIGWPTS+PTNEK++F+K+VL+EK AL+ F AS PLRPGVE F+DDA NEG+P+
Sbjct: 137 FFNRIGWPTSLPTNEKESFMKSVLREKLKALEVFSASDSLPLRPGVEQFIDDALNEGVPV 196
Query: 204 IVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263
+LT YG++G++ +R ++EKLG ER SKI IVG EEVERSLYGQ VLG+G++S +DEQL
Sbjct: 197 AILTTYGRNGEKTSRYIIEKLGQERTSKIHIVGKEEVERSLYGQLVLGEGVASSLDEQLV 256
Query: 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323
EA+KA SA+KQ IAEEVAS+LKLSVDI+ +S S +KI+ LRAG+EY + V+NC L+
Sbjct: 257 KEAQKAASAEKQRIAEEVASILKLSVDINAASKSS-EKIIVTLRAGSEYVGRDVQNCVLV 315
Query: 324 AGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKLRHSQW 378
AGSQSGV A+RIGMPC+V+RSSLT+RAEF SA AVMDGFGG DLTISKL +W
Sbjct: 316 AGSQSGVLAAERIGMPCIVVRSSLTARAEFHSAKAVMDGFGGTDLTISKLLSKKW 370
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 378 | ||||||
| TAIR|locus:2153348 | 372 | AT5G45170 "AT5G45170" [Arabido | 0.835 | 0.849 | 0.630 | 3.5e-107 | |
| TAIR|locus:2101165 | 319 | AT3G48420 [Arabidopsis thalian | 0.399 | 0.473 | 0.343 | 3.4e-18 | |
| TAIR|locus:2140050 | 316 | AT4G39970 [Arabidopsis thalian | 0.343 | 0.411 | 0.299 | 1.6e-09 |
| TAIR|locus:2153348 AT5G45170 "AT5G45170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
Identities = 200/317 (63%), Positives = 252/317 (79%)
Query: 59 GKCLHVNPXXXXXXXXGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDC 118
GKCL + + NP + AV+LEVD V++D + NRQAFNVAFQKLGLDC
Sbjct: 53 GKCLRLQRFSSICLSASREDVNPSEEFAVILEVDRVMIDTWS-SNRQAFNVAFQKLGLDC 111
Query: 119 ANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFL 178
ANW P+Y+DLLRK A DE++ML+L+FN+IGWP+S+PT+EK +FVK+VL+EKKNA+DEFL
Sbjct: 112 ANWPEPVYSDLLRKGAADEEKMLLLYFNQIGWPSSLPTSEKASFVKSVLREKKNAMDEFL 171
Query: 179 ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 238
SK PLR GV++F+D+AY E +P+ ++TAY KSGD++A S+VE LG ER+ +K++G+
Sbjct: 172 ISKSLPLRSGVQEFIDNAYAEKVPVAIVTAYCKSGDKVALSIVEMLGQERLPNVKVIGDN 231
Query: 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPES 298
EVE+S+YGQ VLGKG+SS ++EQL E +KA SA+KQ IAEEVASMLKLSVDIDT+S E
Sbjct: 232 EVEQSMYGQLVLGKGVSSSLEEQLVKEVKKAASAEKQRIAEEVASMLKLSVDIDTTSSER 291
Query: 299 LDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANA 358
L+KIV ALRA AE+ PV NC L+AGSQ GV+ A+ IGMPCVVMRSSLT+R EFPSA
Sbjct: 292 LEKIVVALRAAAEHIGLPVNNCVLVAGSQPGVSAAKMIGMPCVVMRSSLTARGEFPSAKG 351
Query: 359 VMDGFGGADLTISKLRH 375
VMDGFGGADLTI KLR+
Sbjct: 352 VMDGFGGADLTIPKLRN 368
|
|
| TAIR|locus:2101165 AT3G48420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 229 (85.7 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 55/160 (34%), Positives = 86/160 (53%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A+L + DGVLVD + G+R +FN F++ L+ W +Y +LL K G ++RM +F
Sbjct: 78 ALLFDCDGVLVDTEKDGHRISFNDTFKERDLN-VTWDVDLYGELL-KIGGGKERMTA-YF 134
Query: 146 NRIGWPTSVPTNE--KKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPL 203
N++GWP P +E +K F+ + ++K + K PLRPGV VD A G+ +
Sbjct: 135 NKVGWPEKAPKDEAERKEFIAGLHKQKTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKV 194
Query: 204 IVLTAYGKSGDRIARSVVE-KLGSERISKIKIVGNEEVER 242
V + S ++ ++V LG ER KIKI + V +
Sbjct: 195 AVCST---SNEKAVSAIVSCLLGPERAEKIKIFAGDVVPK 231
|
|
| TAIR|locus:2140050 AT4G39970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 125 (49.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 44/147 (29%), Positives = 68/147 (46%)
Query: 81 PPRDL-AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCA-------NWTAPIYTDLLRK 132
P R L A++ + DGV++++ +RQA+N AF + C +W+ Y
Sbjct: 59 PLRSLEALIFDCDGVILESENL-HRQAYNDAFSHFDVRCPPSSSESLDWSLEFYDKFQNL 117
Query: 133 SAGDEDRMLVLFFNRIGWPTSV-----PTNEK-KAFVKNVLQE-KKNALDEFLASKDAPL 185
G + +M +F GWPTS P N+ +A + + LQ+ K E + S
Sbjct: 118 VGGGKPKMR-WYFKENGWPTSTIFDSPPQNDDDRAKLIDTLQDWKTERYKEIIKSGSVEP 176
Query: 186 RPGVEDFVDDAYNEGIPLIVLTAYGKS 212
RPGV +D+A G L V +A KS
Sbjct: 177 RPGVIRLMDEAKAAGKKLAVCSAATKS 203
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | eugene3.00150918 | hypothetical protein (380 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | gw1.XIII.601.1 | SubName- Full=Putative uncharacterized protein; (1016 aa) | • | • | 0.508 | ||||||
 | gw1.XIX.851.1 | hypothetical protein (317 aa) | • | • | 0.427 | ||||||
 | fgenesh4_pm.C_LG_X000153 | hypothetical protein (221 aa) | • | • | 0.403 | ||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 378 | |||
| PLN02779 | 286 | PLN02779, PLN02779, haloacid dehalogenase-like hyd | 4e-22 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 5e-06 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 9e-05 |
| >gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 94.4 bits (235), Expect = 4e-22
Identities = 83/297 (27%), Positives = 119/297 (40%), Gaps = 72/297 (24%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A+L + DGVLV+ R G+R AFN AF++ GL W +Y D L G ++RM +F
Sbjct: 42 ALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELY-DELLNIGGGKERM-TWYF 99
Query: 146 NRIGWPTS----VPTNE--KKAFVKNVLQEKKNAL-DEFLASKDAPLRPGVEDFVDDAYN 198
N GWPTS P +E +K V + L ++K L E + S PLRPGV +D+A
Sbjct: 100 NENGWPTSTIEKAPKDEEERKELVDS-LHDRKTELFKELIESGALPLRPGVLRLMDEALA 158
Query: 199 EGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258
GI + V + + + KIV +LG
Sbjct: 159 AGIKVAVCSTSNEK-----------------AVSKIVNT-----------LLG------- 183
Query: 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSV--DIDTSSPESLDKIVAALRAGAEYAEKP 316
E A L + D+ P+ +AA G
Sbjct: 184 --------------------PERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGV-----D 218
Query: 317 VRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKL 373
C ++ S G+ A+ GM C+V +SS T+ +F A+AV D G L L
Sbjct: 219 PSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLEDFDL 275
|
Length = 286 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 5e-06
Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 26/143 (18%)
Query: 87 VLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN 146
++ ++DG L+D ++A ++LGLD + +L D L
Sbjct: 1 IIFDLDGTLIDFDPVIFEALRDLAAERLGLDISAE------ELREAGGLPFDEALADLLR 54
Query: 147 RIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVL 206
E AL E+ P V + + +G+ L++L
Sbjct: 55 EHP---------------IDPDEILEALLEYNLESRLEPFPDVVELLRRLKAKGVKLVIL 99
Query: 207 TAYGKSGDR-IARSVVEKLGSER 228
+ +G R ++EKLG
Sbjct: 100 S----NGSREAVERLLEKLGLLD 118
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Length = 176 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 9e-05
Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 20/141 (14%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE-DRMLVLF 144
A+L ++DG LVD+ +AFN A +LGL P+ + +R+ G D ++
Sbjct: 6 AILFDLDGTLVDSAE-DILRAFNAALAELGLP------PLDEEEIRQLIGLGLDELIERL 58
Query: 145 FNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLI 204
+ V + ++ L + ++ L PGV++ + + G L
Sbjct: 59 LGEADEEAAAE---------LVERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLG 109
Query: 205 VLTAYGKSGDRIARSVVEKLG 225
++T + +++ LG
Sbjct: 110 IVTNKPERE---LDILLKALG 127
|
Length = 220 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 378 | |||
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.96 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.96 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.96 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.95 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.95 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.95 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.95 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.95 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.95 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.95 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.95 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.95 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.94 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.94 | |
| PLN02940 | 382 | riboflavin kinase | 99.94 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.94 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.94 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.94 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.93 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.93 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.93 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.93 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.93 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.92 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.92 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.92 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.92 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.92 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.91 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.91 | |
| PLN02811 | 220 | hydrolase | 99.9 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.9 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.89 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.89 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.89 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.86 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.86 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.86 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.85 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.85 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.85 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.83 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.83 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.82 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.82 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.8 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.8 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.78 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.78 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.76 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.71 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.7 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.66 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.66 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.66 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.65 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.64 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.63 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.63 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.62 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.6 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.59 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.58 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.58 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.58 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.57 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.55 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.53 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.53 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.53 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.52 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.52 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.52 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.51 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.46 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.45 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.45 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.44 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.42 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.37 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.28 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.28 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.27 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.25 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.23 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.21 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 99.19 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.18 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.15 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.14 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.12 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.09 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.07 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.07 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.06 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.05 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.0 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 98.97 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 98.91 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 98.91 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.84 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.82 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 98.81 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.8 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 98.8 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 98.79 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 98.77 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.76 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.75 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.74 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.74 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.73 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.71 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 98.71 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.68 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.66 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 98.66 | |
| PLN02887 | 580 | hydrolase family protein | 98.65 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 98.64 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.63 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 98.63 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.6 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.6 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.59 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.54 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.47 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.46 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.42 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.32 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.31 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.29 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.26 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.23 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.13 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 98.1 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.05 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.02 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 97.98 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 97.92 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.92 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 97.91 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.9 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 97.89 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.89 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.86 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 97.84 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 97.82 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 97.79 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.75 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 97.73 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 97.7 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 97.69 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 97.68 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 97.67 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 97.65 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 97.51 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.46 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 97.44 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 97.43 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 97.39 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 97.34 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 97.26 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.24 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.15 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 97.09 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 97.06 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 97.06 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.03 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 97.02 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 96.99 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 96.99 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 96.83 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 96.83 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 96.71 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 96.67 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 96.62 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 96.56 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 96.5 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 96.38 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 96.38 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 96.29 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 96.23 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 96.14 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 95.89 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 95.66 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 95.36 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 94.81 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 94.25 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 93.92 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 93.86 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 93.58 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 93.23 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 93.18 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 93.06 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 92.59 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 92.56 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 92.55 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 92.24 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 92.19 | |
| PLN02423 | 245 | phosphomannomutase | 91.91 | |
| COG5083 | 580 | SMP2 Uncharacterized protein involved in plasmid m | 91.88 | |
| KOG1618 | 389 | consensus Predicted phosphatase [General function | 91.74 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 91.45 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 90.21 | |
| KOG2134 | 422 | consensus Polynucleotide kinase 3' phosphatase [Re | 89.77 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 89.4 | |
| PLN02423 | 245 | phosphomannomutase | 89.08 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 88.92 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 88.53 | |
| PLN02580 | 384 | trehalose-phosphatase | 88.51 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 88.17 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 88.04 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 87.39 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 86.78 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 86.14 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 86.02 | |
| PLN03017 | 366 | trehalose-phosphatase | 84.5 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 84.22 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 84.06 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 84.01 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 83.72 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 83.6 | |
| PLN02580 | 384 | trehalose-phosphatase | 83.07 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 82.47 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 81.76 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 81.47 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 80.58 | |
| COG4502 | 180 | 5'(3')-deoxyribonucleotidase [Nucleotide transport | 80.02 |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-28 Score=231.67 Aligned_cols=226 Identities=31% Similarity=0.546 Sum_probs=163.5
Q ss_pred CCccEEEEeccccccccc-ccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCC----CCCC-
Q 017067 82 PRDLAVLLEVDGVLVDAY-RFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWP----TSVP- 155 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~-~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~----~~l~- 155 (378)
.++++|||||||||+|+. .. +..+|+++++++|++...++.+.+..+.. .++....+... +...+++ ...+
T Consensus 38 ~~~k~VIFDlDGTLvDS~~~~-~~~a~~~~l~~~G~~~~~~~~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~ 114 (286)
T PLN02779 38 ALPEALLFDCDGVLVETERDG-HRVAFNDAFKEFGLRPVEWDVELYDELLN-IGGGKERMTWY-FNENGWPTSTIEKAPK 114 (286)
T ss_pred cCCcEEEEeCceeEEccccHH-HHHHHHHHHHHcCCCCCCCCHHHHHHHHc-cCCChHHHHHH-HHHcCCCccccccCCc
Confidence 457999999999999999 86 88999999999998422355555554543 33334444333 3345554 1121
Q ss_pred -chhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchh-e
Q 017067 156 -TNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI-K 233 (378)
Q Consensus 156 -~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~-~ 233 (378)
.++....++.+.+.+.+.|.+.+....++++||+.++|+.|+++|++++|+||+. ......+++.++...+|+. .
T Consensus 115 ~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~---~~~~~~~l~~~~~~~~~~~~~ 191 (286)
T PLN02779 115 DEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSN---EKAVSKIVNTLLGPERAQGLD 191 (286)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHhccccccCceE
Confidence 2222333444555555666666533446899999999999999999999999954 5777778877654444442 2
Q ss_pred eechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHc
Q 017067 234 IVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA 313 (378)
Q Consensus 234 iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~l 313 (378)
+++++++. ..||+|++ |..+++++
T Consensus 192 ~v~~~~~~------------------------------------------~~KP~p~~--------------~~~a~~~~ 215 (286)
T PLN02779 192 VFAGDDVP------------------------------------------KKKPDPDI--------------YNLAAETL 215 (286)
T ss_pred EEeccccC------------------------------------------CCCCCHHH--------------HHHHHHHh
Confidence 23332221 12777666 99999999
Q ss_pred CCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHH
Q 017067 314 EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLT 369 (378)
Q Consensus 314 gv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~ 369 (378)
|++|++|+||||+.+|+++|+++||++|++.++.....++..+|++++++.++...
T Consensus 216 ~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~ 271 (286)
T PLN02779 216 GVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLE 271 (286)
T ss_pred CcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcchh
Confidence 99999999999999999999999999999999877777787899999999998643
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.9e-28 Score=227.62 Aligned_cols=223 Identities=16% Similarity=0.211 Sum_probs=157.4
Q ss_pred CCCCCccEEEEecccccccccccchHHHHHHHHHHcCCCC-CCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCch
Q 017067 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDC-ANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTN 157 (378)
Q Consensus 79 ~~~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~ 157 (378)
...+++++|+|||||||+|+... +..+|.++++++|++. ..++.+.+...+ .+.........+ +.. .. +
T Consensus 17 ~~~~~~k~viFDlDGTLiDs~~~-~~~a~~~~~~~~g~~~g~~~~~~~~~~~~--~G~~~~~~~~~~---~~~--~~--~ 86 (248)
T PLN02770 17 SGLAPLEAVLFDVDGTLCDSDPL-HYYAFREMLQEINFNGGVPITEEFFVENI--AGKHNEDIALGL---FPD--DL--E 86 (248)
T ss_pred cccCccCEEEEcCCCccCcCHHH-HHHHHHHHHHHhccccCCCCCHHHHHHHc--CCCCHHHHHHHH---cCc--ch--h
Confidence 33456899999999999999987 8899999999997531 013333322211 122222222111 111 10 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
. ...+...+...|.+.. .....++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|+. +++.
T Consensus 87 ~----~~~~~~~~~~~y~~~~-~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~---~~~~~~~~l~~~gl~~~Fd~-iv~~ 157 (248)
T PLN02770 87 R----GLKFTDDKEALFRKLA-SEQLKPLNGLYKLKKWIEDRGLKRAAVTNA---PRENAELMISLLGLSDFFQA-VIIG 157 (248)
T ss_pred h----HHHHHHHHHHHHHHHH-HhcCCcCccHHHHHHHHHHcCCeEEEEeCC---CHHHHHHHHHHcCChhhCcE-EEec
Confidence 0 1122334445555544 345789999999999999999999999995 46889999999999999988 4555
Q ss_pred hhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCC
Q 017067 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (378)
Q Consensus 238 ~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p 317 (378)
+++.. .||+|++ |..+++++|++|
T Consensus 158 ~~~~~------------------------------------------~KP~p~~--------------~~~a~~~~~~~~ 181 (248)
T PLN02770 158 SECEH------------------------------------------AKPHPDP--------------YLKALEVLKVSK 181 (248)
T ss_pred CcCCC------------------------------------------CCCChHH--------------HHHHHHHhCCCh
Confidence 44322 1666665 999999999999
Q ss_pred CcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCC--CCCcEEecCCCcchH--HHHHHhhcc
Q 017067 318 RNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEF--PSANAVMDGFGGADL--TISKLRHSQ 377 (378)
Q Consensus 318 ~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l--~~ad~vi~~l~e~~~--~~~~l~~~~ 377 (378)
++|+||||+.+|+++|+++||++|++.++... .++ ..++++++++.++.. .+..+.++|
T Consensus 182 ~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~-~~l~~~~a~~vi~~~~e~~~~~~~~~~~~~~ 244 (248)
T PLN02770 182 DHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPE-SLLMEAKPTFLIKDYEDPKLWAALEELDQKG 244 (248)
T ss_pred hHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCH-HHHhhcCCCEEeccchhhHHHHHHhhccccc
Confidence 99999999999999999999999999987533 233 358999999999543 355555443
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=222.69 Aligned_cols=210 Identities=23% Similarity=0.301 Sum_probs=150.0
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
++++|||||||||+||+.. +..+|.++++++|+. .+.+.+.... ++...+....+....+-.....
T Consensus 1 ~~~avIFD~DGvLvDse~~-~~~a~~~~~~~~g~~---~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~------- 66 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPL-HARAWLEALKEYGIE---ISDEEIRELH---GGGIARIIDLLRKLAAGEDPAD------- 66 (221)
T ss_pred CCcEEEEcCCCCcCcchHH-HHHHHHHHHHHcCCC---CCHHHHHHHH---CCChHHHHHHHHHHhcCCcccC-------
Confidence 3689999999999999998 999999999999987 4544544443 2233333333443333221111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
........... ........+++||+.++|++|+++|+++++.|++ ....+...++.+|+.++|+. +++++++.+
T Consensus 67 ~~~~~~~~~~~--~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s---~~~~~~~~L~~~gl~~~f~~-~v~~~dv~~ 140 (221)
T COG0637 67 LAELERLLYEA--EALELEGLKPIPGVVELLEQLKARGIPLAVASSS---PRRAAERVLARLGLLDYFDV-IVTADDVAR 140 (221)
T ss_pred HHHHHHHHHHH--HHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCC---hHHHHHHHHHHccChhhcch-hccHHHHhc
Confidence 00111111111 1122346789999999999999999999999994 45789999999999999998 455555543
Q ss_pred hhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017067 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (378)
Q Consensus 243 ~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~ 322 (378)
.||+||+ |..+++++|++|++||+
T Consensus 141 ------------------------------------------~KP~Pd~--------------yL~Aa~~Lgv~P~~Cvv 164 (221)
T COG0637 141 ------------------------------------------GKPAPDI--------------YLLAAERLGVDPEECVV 164 (221)
T ss_pred ------------------------------------------CCCCCHH--------------HHHHHHHcCCChHHeEE
Confidence 2888888 99999999999999999
Q ss_pred EeCCHhHHHHHHHcCCCEEEEcCCCCCC----CCCCCCcEEecCCCcchH
Q 017067 323 IAGSQSGVAGAQRIGMPCVVMRSSLTSR----AEFPSANAVMDGFGGADL 368 (378)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~~~~~~----~~l~~ad~vi~~l~e~~~ 368 (378)
|+|+.++|++|++|||.+|++..+.... .....++.+..++.++..
T Consensus 165 iEDs~~Gi~Aa~aAGm~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 214 (221)
T COG0637 165 VEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLLDLAELPA 214 (221)
T ss_pred EecchhHHHHHHHCCCEEEEecCCCCccccchhhhhhcchhhccHHHHHH
Confidence 9999999999999999999999854421 111224555555555543
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=219.68 Aligned_cols=211 Identities=16% Similarity=0.170 Sum_probs=158.4
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHH
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i 163 (378)
+++|+||+||||+|+... +..+|+++++++|++ .+...+.... .+.....+...+....+.+. + ..
T Consensus 1 ~k~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~----~----~~ 66 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGL-VYRALRQAVTAAGLS---PTPEEVQSAW--MGQSKIEAIRALLALDGADE----A----EA 66 (220)
T ss_pred CcEEEEecCCCeeccCch-HHHHHHHHHHHcCCC---CCHHHHHHhh--cCCCHHHHHHHHHhccCCCH----H----HH
Confidence 478999999999999997 899999999999987 3433333311 12233344444554445321 1 13
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc--ccchheeechhhHH
Q 017067 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEEVE 241 (378)
Q Consensus 164 ~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~--~~f~~~iv~~~~~~ 241 (378)
+.+.+.+.+.+.+.+.....+++||+.++|+.|+++|++++|+||+ .......+++.+|+. .+|+. +++.+++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~---~~~~~~~~l~~~~l~~~~~f~~-i~~~~~~~ 142 (220)
T TIGR03351 67 QAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGF---DRDTAERLLEKLGWTVGDDVDA-VVCPSDVA 142 (220)
T ss_pred HHHHHHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCC---chHHHHHHHHHhhhhhhccCCE-EEcCCcCC
Confidence 3445555555655553445689999999999999999999999994 468889999999998 89987 44544432
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCC-CCcE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNC 320 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~-p~~~ 320 (378)
. .||+|++ |..+++++|+. |++|
T Consensus 143 ~------------------------------------------~KP~p~~--------------~~~a~~~~~~~~~~~~ 166 (220)
T TIGR03351 143 A------------------------------------------GRPAPDL--------------ILRAMELTGVQDVQSV 166 (220)
T ss_pred C------------------------------------------CCCCHHH--------------HHHHHHHcCCCChhHe
Confidence 1 2666666 99999999997 7999
Q ss_pred EEEeCCHhHHHHHHHcCCCE-EEEcCCCCCCCCCC--CCcEEecCCCcchH
Q 017067 321 FLIAGSQSGVAGAQRIGMPC-VVMRSSLTSRAEFP--SANAVMDGFGGADL 368 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~-i~v~~~~~~~~~l~--~ad~vi~~l~e~~~ 368 (378)
+||||+.+|+++|+++||++ |++.++......+. .++++++++.++..
T Consensus 167 ~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~ 217 (220)
T TIGR03351 167 AVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPA 217 (220)
T ss_pred EEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHH
Confidence 99999999999999999999 89988766555443 47999999988754
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=223.84 Aligned_cols=212 Identities=17% Similarity=0.135 Sum_probs=153.2
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHH----------HHHHHHHHcCCCCC
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR----------MLVLFFNRIGWPTS 153 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~----------~~~~~~~~~g~~~~ 153 (378)
+++||||+||||+|+....+..+|++++.++|++ ++.+.+...++ ..... ....+...++.+.
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~---~~~~~~~~~~G---~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 74 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQ---ITLEEARGPMG---LGKWDHIRALLKMPAVAERWRAKFGRLP- 74 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCC---ccHHHHHHhcC---ccHHHHHHHHhcCHHHHHHHHHHhCCCC-
Confidence 6899999999999986533578999999999986 45444433321 11111 1222334444321
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc-hh
Q 017067 154 VPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KI 232 (378)
Q Consensus 154 l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f-~~ 232 (378)
+.+ .+..+.+.+.+.+.+.+ .....++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+| +.
T Consensus 75 -~~~----~~~~~~~~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~---~~~~~~~~l~~~gl~~~f~d~ 145 (253)
T TIGR01422 75 -TEA----DIEAIYEAFEPLQLAKL-AEYSSPIPGVIEVIAYLRARGIKIGSTTGY---TREMMDVVAPEAALQGYRPDY 145 (253)
T ss_pred -CHH----HHHHHHHHHHHHHHHHH-HhcCccCCCHHHHHHHHHHCCCeEEEECCC---cHHHHHHHHHHHHhcCCCCce
Confidence 111 23344445555444444 345789999999999999999999999994 468889999999999986 55
Q ss_pred eeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHH
Q 017067 233 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY 312 (378)
Q Consensus 233 ~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~ 312 (378)
+++.+++.. .||+|++ |..++++
T Consensus 146 -ii~~~~~~~------------------------------------------~KP~p~~--------------~~~a~~~ 168 (253)
T TIGR01422 146 -NVTTDDVPA------------------------------------------GRPAPWM--------------ALKNAIE 168 (253)
T ss_pred -EEccccCCC------------------------------------------CCCCHHH--------------HHHHHHH
Confidence 556554422 2666666 9999999
Q ss_pred cCCC-CCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCC-----------------------CCCC--CCCcEEecCCCcc
Q 017067 313 AEKP-VRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTS-----------------------RAEF--PSANAVMDGFGGA 366 (378)
Q Consensus 313 lgv~-p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~-----------------------~~~l--~~ad~vi~~l~e~ 366 (378)
+|+. |++|++|||+.+|+++|+++||.+|+|.++... ..++ ..||+|++++.++
T Consensus 169 l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~el 248 (253)
T TIGR01422 169 LGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHYVIDTLAEL 248 (253)
T ss_pred cCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHHH
Confidence 9995 999999999999999999999999999988652 1233 3489999999997
Q ss_pred hH
Q 017067 367 DL 368 (378)
Q Consensus 367 ~~ 368 (378)
..
T Consensus 249 ~~ 250 (253)
T TIGR01422 249 PA 250 (253)
T ss_pred HH
Confidence 54
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-27 Score=224.41 Aligned_cols=214 Identities=20% Similarity=0.255 Sum_probs=154.4
Q ss_pred CCCCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhH-HHHHHhhccCChHHHHHHHHHHcCCCCCCCch
Q 017067 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI-YTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTN 157 (378)
Q Consensus 79 ~~~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~ 157 (378)
.....+++|||||||||+|+....+..+|+++++++|++ ++... +..+. +......+..+ +++.. . .
T Consensus 19 ~~~~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~---~~~~e~~~~~~---G~~~~~~~~~l---~~~~~--~-~ 86 (260)
T PLN03243 19 RLGCGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKR---PPPAFLLKRAE---GMKNEQAISEV---LCWSR--D-F 86 (260)
T ss_pred HhcCCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCC---CCHHHHHHHhc---CCCHHHHHHHH---hccCC--C-H
Confidence 344678999999999999996422678999999999987 33322 22222 22222222222 22211 1 1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
..+..+...+...+.. .......++||+.++|+.|+++|++++|+||+. ...++.+++.+|+..+|+. ++++
T Consensus 87 ---~~~~~l~~~~~~~~~~-~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~---~~~~~~~l~~~gl~~~Fd~-ii~~ 158 (260)
T PLN03243 87 ---LQMKRLAIRKEDLYEY-MQGGLYRLRPGSREFVQALKKHEIPIAVASTRP---RRYLERAIEAVGMEGFFSV-VLAA 158 (260)
T ss_pred ---HHHHHHHHHHHHHHHH-HHccCcccCCCHHHHHHHHHHCCCEEEEEeCcC---HHHHHHHHHHcCCHhhCcE-EEec
Confidence 1133444444444432 223457789999999999999999999999954 5888999999999999998 4444
Q ss_pred hhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCC
Q 017067 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (378)
Q Consensus 238 ~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p 317 (378)
+++.. .||+|++ |..+++++|++|
T Consensus 159 ~d~~~------------------------------------------~KP~Pe~--------------~~~a~~~l~~~p 182 (260)
T PLN03243 159 EDVYR------------------------------------------GKPDPEM--------------FMYAAERLGFIP 182 (260)
T ss_pred ccCCC------------------------------------------CCCCHHH--------------HHHHHHHhCCCh
Confidence 44321 2777666 999999999999
Q ss_pred CcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHH
Q 017067 318 RNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLT 369 (378)
Q Consensus 318 ~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~ 369 (378)
++|+||||+.+|+++|+++||++|++. +......+..++++++++.++...
T Consensus 183 ~~~l~IgDs~~Di~aA~~aG~~~i~v~-g~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 183 ERCIVFGNSNSSVEAAHDGCMKCVAVA-GKHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred HHeEEEcCCHHHHHHHHHcCCEEEEEe-cCCchhhhccCCEEeCCHHHHHHH
Confidence 999999999999999999999999997 444445666799999999998654
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-27 Score=220.30 Aligned_cols=210 Identities=18% Similarity=0.196 Sum_probs=154.3
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
.+++||||+||||+|+... +..+|+.+++++|.+. ++.+.+....+. ......... .+ . ++.++
T Consensus 11 ~~k~viFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g~---~~~~~~~~~---~~--~-~~~~~---- 74 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPD-MLATVNAMLAARGRAP--ITLAQLRPVVSK---GARAMLAVA---FP--E-LDAAA---- 74 (229)
T ss_pred cCCEEEEcCcCccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHHhhh---HHHHHHHHH---hc--c-CChHH----
Confidence 4689999999999999987 8899999999999873 555554444321 122221111 11 1 11111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
.+.+.+.+.+.|.+.+ ....+++||+.++|+.|+++|++++|+||+. ...+..+++.+|+..+|+. +++.+++..
T Consensus 75 ~~~~~~~~~~~~~~~~-~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~---~~~~~~~l~~~~l~~~f~~-i~~~~~~~~ 149 (229)
T PRK13226 75 RDALIPEFLQRYEALI-GTQSQLFDGVEGMLQRLECAGCVWGIVTNKP---EYLARLILPQLGWEQRCAV-LIGGDTLAE 149 (229)
T ss_pred HHHHHHHHHHHHHHhh-hhcCeeCCCHHHHHHHHHHCCCeEEEECCCC---HHHHHHHHHHcCchhcccE-EEecCcCCC
Confidence 2344455555565544 2346799999999999999999999999954 5777889999999999986 444433211
Q ss_pred hhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017067 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (378)
Q Consensus 243 ~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~ 322 (378)
.||+|++ |..+++++|++|++|++
T Consensus 150 ------------------------------------------~KP~p~~--------------~~~~~~~l~~~p~~~l~ 173 (229)
T PRK13226 150 ------------------------------------------RKPHPLP--------------LLVAAERIGVAPTDCVY 173 (229)
T ss_pred ------------------------------------------CCCCHHH--------------HHHHHHHhCCChhhEEE
Confidence 2666666 99999999999999999
Q ss_pred EeCCHhHHHHHHHcCCCEEEEcCCCCCC-CCC--CCCcEEecCCCcchHH
Q 017067 323 IAGSQSGVAGAQRIGMPCVVMRSSLTSR-AEF--PSANAVMDGFGGADLT 369 (378)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~~~~~~-~~l--~~ad~vi~~l~e~~~~ 369 (378)
|||+.+|+++|+++||++|++.++.... ..+ ..++++++++.++...
T Consensus 174 IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (229)
T PRK13226 174 VGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNP 223 (229)
T ss_pred eCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHH
Confidence 9999999999999999999998887532 222 3589999999988543
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-27 Score=215.00 Aligned_cols=208 Identities=20% Similarity=0.254 Sum_probs=154.4
Q ss_pred EEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHHHHH
Q 017067 87 VLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNV 166 (378)
Q Consensus 87 viFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i~~~ 166 (378)
||||+||||+|+... +..+++.+++++|++. ++...+...++ .....+...+....+.... ...++.+
T Consensus 1 viFD~DGTL~Ds~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~------~~~~~~~ 68 (213)
T TIGR01449 1 VLFDLDGTLVDSAPD-IAAAVNMALAALGLPP--ATLARVIGFIG---NGVPVLMERVLAWAGQEPD------AQRVAEL 68 (213)
T ss_pred CeecCCCccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHHhc---ccHHHHHHHHhhccccccC------hHHHHHH
Confidence 699999999999886 7789999999999862 55555544432 2223333344443332211 1123444
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhh
Q 017067 167 LQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 246 (378)
Q Consensus 167 ~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~ 246 (378)
.+.+.+.|.+.. ....+++||+.++|+.|+++|++++|+||+ ....++.+++++|+.++|+. +++.+++..
T Consensus 69 ~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~---- 139 (213)
T TIGR01449 69 RKLFDRHYEEVA-GELTSVFPGVEATLGALRAKGLRLGLVTNK---PTPLARPLLELLGLAKYFSV-LIGGDSLAQ---- 139 (213)
T ss_pred HHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCcHhhCcE-EEecCCCCC----
Confidence 555555555544 335679999999999999999999999994 46889999999999999986 444443321
Q ss_pred ccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 017067 247 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 326 (378)
Q Consensus 247 ~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs 326 (378)
.||+|++ |..+++++|++|++|++|||+
T Consensus 140 --------------------------------------~Kp~p~~--------------~~~~~~~~~~~~~~~~~igDs 167 (213)
T TIGR01449 140 --------------------------------------RKPHPDP--------------LLLAAERLGVAPQQMVYVGDS 167 (213)
T ss_pred --------------------------------------CCCChHH--------------HHHHHHHcCCChhHeEEeCCC
Confidence 1666555 999999999999999999999
Q ss_pred HhHHHHHHHcCCCEEEEcCCCCCCCCCC--CCcEEecCCCcch
Q 017067 327 QSGVAGAQRIGMPCVVMRSSLTSRAEFP--SANAVMDGFGGAD 367 (378)
Q Consensus 327 ~~Di~aA~~aG~~~i~v~~~~~~~~~l~--~ad~vi~~l~e~~ 367 (378)
.+|+++|+++||++|++.++......+. .++++++++.++.
T Consensus 168 ~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~ 210 (213)
T TIGR01449 168 RVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELP 210 (213)
T ss_pred HHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHH
Confidence 9999999999999999988766544443 5899999999874
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-27 Score=216.73 Aligned_cols=211 Identities=18% Similarity=0.261 Sum_probs=154.6
Q ss_pred CCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCCh-hHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhh
Q 017067 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA-PIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEK 159 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~ 159 (378)
...+++|+||+||||+|+... +..++.+++.++|++ .+. ......+ +.........+....++... .
T Consensus 4 ~~~~k~iiFD~DGTL~d~~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~----~- 71 (222)
T PRK10826 4 PRQILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVD---ISRREELPDTL---GLRIDQVVDLWYARQPWNGP----S- 71 (222)
T ss_pred cccCcEEEEcCCCCCCcCHHH-HHHHHHHHHHHCCCC---CCHHHHHHHhh---CCCHHHHHHHHHHhcCCCCC----C-
Confidence 345899999999999999987 889999999999987 232 2222222 22223333344444444321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhh
Q 017067 160 KAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 239 (378)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~ 239 (378)
.+...+...+.+.+.+ ....+++||+.++|+.|+++|++++|+||. .....+.+++.+++..+|+. +++.++
T Consensus 72 ---~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~-~~~~~~ 143 (222)
T PRK10826 72 ---RQEVVQRIIARVISLI-EETRPLLPGVREALALCKAQGLKIGLASAS---PLHMLEAVLTMFDLRDYFDA-LASAEK 143 (222)
T ss_pred ---HHHHHHHHHHHHHHHH-hcCCCCCCCHHHHHHHHHHCCCeEEEEeCC---cHHHHHHHHHhCcchhcccE-EEEccc
Confidence 1122333333343333 234679999999999999999999999994 46888899999999999987 444433
Q ss_pred HHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCc
Q 017067 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (378)
Q Consensus 240 ~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~ 319 (378)
+.. +||+|++ |+.+++++|++|++
T Consensus 144 ~~~------------------------------------------~Kp~~~~--------------~~~~~~~~~~~~~~ 167 (222)
T PRK10826 144 LPY------------------------------------------SKPHPEV--------------YLNCAAKLGVDPLT 167 (222)
T ss_pred CCC------------------------------------------CCCCHHH--------------HHHHHHHcCCCHHH
Confidence 321 2666555 99999999999999
Q ss_pred EEEEeCCHhHHHHHHHcCCCEEEEcCCCCCC-CCCCCCcEEecCCCcch
Q 017067 320 CFLIAGSQSGVAGAQRIGMPCVVMRSSLTSR-AEFPSANAVMDGFGGAD 367 (378)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~-~~l~~ad~vi~~l~e~~ 367 (378)
|++|||+.+|+++|+++||++|++.++.... .....+++++.++.|+.
T Consensus 168 ~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~ 216 (222)
T PRK10826 168 CVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELT 216 (222)
T ss_pred eEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHh
Confidence 9999999999999999999999999886554 23446899999999973
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-27 Score=216.52 Aligned_cols=210 Identities=10% Similarity=0.147 Sum_probs=153.8
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
|++++|+||+||||+|+... +..+|.+++++++... .+...+....+ ...... ...++ .+.
T Consensus 1 m~~~~viFD~DGTL~ds~~~-~~~a~~~~~~~~~~~~--~~~~~~~~~~G---~~~~~~----~~~~~------~~~--- 61 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNEL-IISSFLHTLKTYYPNQ--YKREDVLPFIG---PSLHDT----FSKID------ESK--- 61 (214)
T ss_pred CCccEEEEeCCCcCccCHHH-HHHHHHHHHHHhCCCC--CCHHHHHHHhC---cCHHHH----HHhcC------HHH---
Confidence 45789999999999999987 8899999999988652 34444433332 221222 12221 111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
.+.+...+...+.+.. ....+++||+.++|+.|+++|++++|+||+ ....+..+++.+|+.++|+. +++.+++.
T Consensus 62 -~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~---~~~~~~~~l~~~gl~~~f~~-i~~~~~~~ 135 (214)
T PRK13288 62 -VEEMITTYREFNHEHH-DELVTEYETVYETLKTLKKQGYKLGIVTTK---MRDTVEMGLKLTGLDEFFDV-VITLDDVE 135 (214)
T ss_pred -HHHHHHHHHHHHHHhh-hhhcccCcCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCChhceeE-EEecCcCC
Confidence 2233333333333322 234679999999999999999999999994 46888999999999999987 45544332
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|++ |..++++++++|++|+
T Consensus 136 ~------------------------------------------~Kp~p~~--------------~~~~~~~~~~~~~~~~ 159 (214)
T PRK13288 136 H------------------------------------------AKPDPEP--------------VLKALELLGAKPEEAL 159 (214)
T ss_pred C------------------------------------------CCCCcHH--------------HHHHHHHcCCCHHHEE
Confidence 1 2666665 9999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCC--CCCcEEecCCCcchHHHHH
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEF--PSANAVMDGFGGADLTISK 372 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l--~~ad~vi~~l~e~~~~~~~ 372 (378)
+|||+.+|+++|+++||++|++.++.....++ ..++++++++.++...+..
T Consensus 160 ~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i~~ 212 (214)
T PRK13288 160 MVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIVGD 212 (214)
T ss_pred EECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHHhh
Confidence 99999999999999999999999886554443 3589999999998765543
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-27 Score=222.65 Aligned_cols=222 Identities=19% Similarity=0.161 Sum_probs=156.9
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHH----------HHHHHHHHcCCC
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR----------MLVLFFNRIGWP 151 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~----------~~~~~~~~~g~~ 151 (378)
+++++||||+||||+|+....+..+|++++.++|++ ++...+...+ +..... ....+...+|.+
T Consensus 2 ~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~---~~~~~~~~~~---G~~~~~~~~~~~~~~~~~~~~~~~~g~~ 75 (267)
T PRK13478 2 MKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVE---ITLEEARGPM---GLGKWDHIRALLKMPRVAARWQAVFGRL 75 (267)
T ss_pred CceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCC---CCHHHHHHhc---CCCHHHHHHHHHhcHHHHHHHHHHhCCC
Confidence 357999999999999996532468999999999986 4443332222 111111 111233344432
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc-
Q 017067 152 TSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS- 230 (378)
Q Consensus 152 ~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f- 230 (378)
. .. ..+..+.+.+...+.+.+ .....++||+.++|+.|+++|++++|+||+. ...+..+++.+++..+|
T Consensus 76 ~--~~----~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~---~~~~~~~l~~~~l~~~~~ 145 (267)
T PRK13478 76 P--TE----ADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGYT---REMMDVVVPLAAAQGYRP 145 (267)
T ss_pred C--CH----HHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCc---HHHHHHHHHHHhhcCCCc
Confidence 1 11 123344444555554444 3356799999999999999999999999954 57788899999988875
Q ss_pred hheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHH
Q 017067 231 KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGA 310 (378)
Q Consensus 231 ~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~ 310 (378)
+. +++.+++.. .||+|++ |..++
T Consensus 146 d~-i~~~~~~~~------------------------------------------~KP~p~~--------------~~~a~ 168 (267)
T PRK13478 146 DH-VVTTDDVPA------------------------------------------GRPYPWM--------------ALKNA 168 (267)
T ss_pred eE-EEcCCcCCC------------------------------------------CCCChHH--------------HHHHH
Confidence 54 455544321 2666666 99999
Q ss_pred HHcCCC-CCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCC-----------------------CCCC--CCCcEEecCCC
Q 017067 311 EYAEKP-VRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTS-----------------------RAEF--PSANAVMDGFG 364 (378)
Q Consensus 311 ~~lgv~-p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~-----------------------~~~l--~~ad~vi~~l~ 364 (378)
+++|+. |++|+||||+.+|+++|+++||++|+|.++... .+++ ..|+++++++.
T Consensus 169 ~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~ 248 (267)
T PRK13478 169 IELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYVIDTIA 248 (267)
T ss_pred HHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHH
Confidence 999996 699999999999999999999999999988652 1233 35899999999
Q ss_pred cchHHHHHHhhc
Q 017067 365 GADLTISKLRHS 376 (378)
Q Consensus 365 e~~~~~~~l~~~ 376 (378)
++...+..+..+
T Consensus 249 ~l~~~l~~~~~~ 260 (267)
T PRK13478 249 DLPAVIADIEAR 260 (267)
T ss_pred HHHHHHHHHHHH
Confidence 998777666544
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-26 Score=212.30 Aligned_cols=204 Identities=17% Similarity=0.253 Sum_probs=142.7
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
|++++|||||||||+|+... +..+|+++++++|++. ..+...+ .+.........+.. + ...++
T Consensus 1 M~~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~-----~~~~~~~--~g~~~~~~~~~~~~--~----~~~~~--- 63 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPA-VERAWSNWADRHGIAP-----DEVLNFI--HGKQAITSLRHFMA--G----ASEAE--- 63 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHH-HHHHHHHHHHHcCCCH-----HHHHHHH--cCCCHHHHHHHHhc--c----CCcHH---
Confidence 46789999999999999987 8899999999999862 2222221 12222222222211 1 11111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
..+. .... ..+.... .....++||+.++|+.|+++|++++|+||+. .......++.+++. .|+. +++.+++.
T Consensus 64 ~~~~-~~~~-~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~---~~~~~~~l~~~~l~-~~~~-i~~~~~~~ 135 (218)
T PRK11587 64 IQAE-FTRL-EQIEATD-TEGITALPGAIALLNHLNKLGIPWAIVTSGS---VPVASARHKAAGLP-APEV-FVTAERVK 135 (218)
T ss_pred HHHH-HHHH-HHHHHhh-hcCceeCcCHHHHHHHHHHcCCcEEEEcCCC---chHHHHHHHhcCCC-CccE-EEEHHHhc
Confidence 1111 1111 1122222 3457799999999999999999999999964 45667778888884 4543 45554432
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|++ |..+++++|++|++|+
T Consensus 136 ~------------------------------------------~KP~p~~--------------~~~~~~~~g~~p~~~l 159 (218)
T PRK11587 136 R------------------------------------------GKPEPDA--------------YLLGAQLLGLAPQECV 159 (218)
T ss_pred C------------------------------------------CCCCcHH--------------HHHHHHHcCCCcccEE
Confidence 1 2777666 9999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
||||+.+|+++|+++||++|++.++.. ..+...++++++++.|+.
T Consensus 160 ~igDs~~di~aA~~aG~~~i~v~~~~~-~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 160 VVEDAPAGVLSGLAAGCHVIAVNAPAD-TPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred EEecchhhhHHHHHCCCEEEEECCCCc-hhhhccCCEEecchhhee
Confidence 999999999999999999999987653 334556899999999985
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=227.82 Aligned_cols=210 Identities=19% Similarity=0.253 Sum_probs=156.1
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
..++|||||||||+|+....+..+|.++++++|++. .+...+..+. +......+..+.. +.. . ...
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~--~~~e~~~~~~---G~~~~~~l~~ll~---~~~--~----~~~ 195 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSP--PPAFILRRVE---GMKNEQAISEVLC---WSR--D----PAE 195 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCC--CHHHHHHHhc---CCCHHHHHHHHhh---ccC--C----HHH
Confidence 578999999999999886326679999999999872 2222222222 2223333333222 111 1 112
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
++.+.+.+.+.|.+.. .....++||+.++|+.|+++|++++|+||+ ....++.+++.+|+..+|+. +++.+++..
T Consensus 196 ~e~l~~~~~~~y~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~---~~~~~~~~L~~lgL~~yFd~-Iv~sddv~~ 270 (381)
T PLN02575 196 LRRMATRKEEIYQALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVSTR---PRKTLENAIGSIGIRGFFSV-IVAAEDVYR 270 (381)
T ss_pred HHHHHHHHHHHHHHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCCHHHceE-EEecCcCCC
Confidence 3455555666665555 345679999999999999999999999994 46899999999999999998 555544422
Q ss_pred hhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017067 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (378)
Q Consensus 243 ~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~ 322 (378)
.||+|++ |..+++++|++|++|+|
T Consensus 271 ------------------------------------------~KP~Pei--------------fl~A~~~lgl~Peecl~ 294 (381)
T PLN02575 271 ------------------------------------------GKPDPEM--------------FIYAAQLLNFIPERCIV 294 (381)
T ss_pred ------------------------------------------CCCCHHH--------------HHHHHHHcCCCcccEEE
Confidence 2777666 99999999999999999
Q ss_pred EeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchH
Q 017067 323 IAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADL 368 (378)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~ 368 (378)
|||+..||++|+++||++|++.++. ...++..++++++++.|+..
T Consensus 295 IGDS~~DIeAAk~AGm~~IgV~~~~-~~~~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 295 FGNSNQTVEAAHDARMKCVAVASKH-PIYELGAADLVVRRLDELSI 339 (381)
T ss_pred EcCCHHHHHHHHHcCCEEEEECCCC-ChhHhcCCCEEECCHHHHHH
Confidence 9999999999999999999998764 33445669999999999854
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.1e-26 Score=211.80 Aligned_cols=214 Identities=23% Similarity=0.297 Sum_probs=153.7
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
+.+++|+||+||||+|+... +..+++.+++++|++. .+......+++. ....+ +....+.... +....
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~ig~---~~~~~---~~~~~~~~~~---~~~~~ 69 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAED-ILRAFNAALAELGLPP--LDEEEIRQLIGL---GLDEL---IERLLGEADE---EAAAE 69 (220)
T ss_pred CCCCEEEEeCCCccccChHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhcC---CHHHH---HHHHhccccc---hhHHH
Confidence 46889999999999999986 8899999999999983 444444444322 22222 2222222111 00001
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
.++.+...+.+.+.+.. ...++||+.++|+.|+++|++++|+||. ....++.+++.+|+..+|+. +++.++..
T Consensus 70 ~~~~~~~~~~~~~~~~~---~~~~~~gv~e~L~~L~~~g~~l~i~T~k---~~~~~~~~l~~~gl~~~F~~-i~g~~~~~ 142 (220)
T COG0546 70 LVERLREEFLTAYAELL---ESRLFPGVKELLAALKSAGYKLGIVTNK---PERELDILLKALGLADYFDV-IVGGDDVP 142 (220)
T ss_pred HHHHHHHHHHHHHHhhc---cCccCCCHHHHHHHHHhCCCeEEEEeCC---cHHHHHHHHHHhCCccccce-EEcCCCCC
Confidence 22333333333333322 2569999999999999999999999994 57999999999999999998 34422221
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|.. +..+++++|++|++++
T Consensus 143 ~------------------------------------------~KP~P~~--------------l~~~~~~~~~~~~~~l 166 (220)
T COG0546 143 P------------------------------------------PKPDPEP--------------LLLLLEKLGLDPEEAL 166 (220)
T ss_pred C------------------------------------------CCcCHHH--------------HHHHHHHhCCChhheE
Confidence 1 1555444 8999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCC--CCCcEEecCCCcchHHH
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEF--PSANAVMDGFGGADLTI 370 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l--~~ad~vi~~l~e~~~~~ 370 (378)
||||+.+|+++|++||+++|+|.+++.....+ ..+|++++++.|+...+
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l 217 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALL 217 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHH
Confidence 99999999999999999999999998533333 34899999999986543
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=224.99 Aligned_cols=208 Identities=20% Similarity=0.293 Sum_probs=159.0
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
..+++|+||+||||+|+... +..+|+.+++++|++ ++...+..+++ .........++..++.+..
T Consensus 9 ~~ik~VIFDlDGTLvDt~~~-~~~a~~~~~~~~G~~---~~~~~~~~~~G---~~~~~~~~~~~~~~~~~~~-------- 73 (382)
T PLN02940 9 KLVSHVILDLDGTLLNTDGI-VSDVLKAFLVKYGKQ---WDGREAQKIVG---KTPLEAAATVVEDYGLPCS-------- 73 (382)
T ss_pred ccCCEEEECCcCcCCcCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhcC---CCHHHHHHHHHHHhCCCCC--------
Confidence 45899999999999999997 889999999999986 56555443332 2333444556666665422
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHH-HhCccccchheeechhhH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVE-KLGSERISKIKIVGNEEV 240 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~-~lgi~~~f~~~iv~~~~~ 240 (378)
.+.+.+...+.+.+.. ....++||+.++|+.|+++|++++|+||+. ...+...++ .+|+.++|+. +++.+++
T Consensus 74 -~~~~~~~~~~~~~~~~--~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~---~~~~~~~l~~~~gl~~~Fd~-ii~~d~v 146 (382)
T PLN02940 74 -TDEFNSEITPLLSEQW--CNIKALPGANRLIKHLKSHGVPMALASNSP---RANIEAKISCHQGWKESFSV-IVGGDEV 146 (382)
T ss_pred -HHHHHHHHHHHHHHHH--ccCCCCcCHHHHHHHHHHCCCcEEEEeCCc---HHHHHHHHHhccChHhhCCE-EEehhhc
Confidence 1233334444444433 246789999999999999999999999954 567777776 7899999998 4555444
Q ss_pred HHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcE
Q 017067 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (378)
Q Consensus 241 ~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~ 320 (378)
.. .||+|++ |..+++++|++|++|
T Consensus 147 ~~------------------------------------------~KP~p~~--------------~~~a~~~lgv~p~~~ 170 (382)
T PLN02940 147 EK------------------------------------------GKPSPDI--------------FLEAAKRLNVEPSNC 170 (382)
T ss_pred CC------------------------------------------CCCCHHH--------------HHHHHHHcCCChhHE
Confidence 22 2777666 999999999999999
Q ss_pred EEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 321 FLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
++|||+.+|+++|+++||++|++.++.........++.+++++.|+.
T Consensus 171 l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~ 217 (382)
T PLN02940 171 LVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQ 217 (382)
T ss_pred EEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcC
Confidence 99999999999999999999999987655555667899999999875
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-26 Score=210.13 Aligned_cols=213 Identities=14% Similarity=0.225 Sum_probs=152.6
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChh-HHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAP-IYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
++++|+||+||||+|+... +..+|.+++.++|++ .+.+ .+....+ .....+...+..+++.+...
T Consensus 3 ~~~~viFD~DGTL~d~~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~------- 68 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSEVI-CSRAYVTMFAEFGIT---LSLEEVFKRFKG---VKLYEIIDIISKEHGVTLAK------- 68 (221)
T ss_pred CCCEEEECCCCCCCCChHH-HHHHHHHHHHHcCCC---CCHHHHHHHhcC---CCHHHHHHHHHHHhCCCCCH-------
Confidence 5889999999999999886 789999999999986 3322 2322221 12344555666666654321
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
+.+...+.+.+...+ .....++||+.++|+.| +++++|+||+ ....++..++.+|+.++|+..+++++++.
T Consensus 69 --~~~~~~~~~~~~~~~-~~~~~~~~gv~~~L~~L---~~~~~ivTn~---~~~~~~~~l~~~~l~~~F~~~v~~~~~~~ 139 (221)
T PRK10563 69 --AELEPVYRAEVARLF-DSELEPIAGANALLESI---TVPMCVVSNG---PVSKMQHSLGKTGMLHYFPDKLFSGYDIQ 139 (221)
T ss_pred --HHHHHHHHHHHHHHH-HccCCcCCCHHHHHHHc---CCCEEEEeCC---cHHHHHHHHHhcChHHhCcceEeeHHhcC
Confidence 122223333333332 23577999999999999 4999999994 45788899999999999964456665442
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|++ |..+++++|++|++|+
T Consensus 140 ~------------------------------------------~KP~p~~--------------~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 140 R------------------------------------------WKPDPAL--------------MFHAAEAMNVNVENCI 163 (221)
T ss_pred C------------------------------------------CCCChHH--------------HHHHHHHcCCCHHHeE
Confidence 2 2666666 9999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC-CCcEEecCCCcchHHHHHHhhccC
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP-SANAVMDGFGGADLTISKLRHSQW 378 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~-~ad~vi~~l~e~~~~~~~l~~~~~ 378 (378)
||||+..||++|+++||++|++..+... ..+. .++.+++++.|+.. .+.+|+|
T Consensus 164 ~igDs~~di~aA~~aG~~~i~~~~~~~~-~~~~~~~~~~~~~~~~l~~---~~~~~~~ 217 (221)
T PRK10563 164 LVDDSSAGAQSGIAAGMEVFYFCADPHN-KPIDHPLVTTFTDLAQLPE---LWKARGW 217 (221)
T ss_pred EEeCcHhhHHHHHHCCCEEEEECCCCCC-cchhhhhhHHHHHHHHHHH---HHHHhcc
Confidence 9999999999999999999998654332 2233 34667888888753 5667766
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-25 Score=204.39 Aligned_cols=216 Identities=19% Similarity=0.224 Sum_probs=157.7
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
+++++|+||+||||+|+... +..++..++.++|.+. ++...+....+ .....+........+ ..++.+
T Consensus 4 ~~~~~iiFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~g---~~~~~~~~~~~~~~~--~~~~~~---- 71 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAPD-LAAAVNAALAALGLPP--AGEERVRTWVG---NGADVLVERALTWAG--REPDEE---- 71 (226)
T ss_pred CcCcEEEEcCCcccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHHhC---ccHHHHHHHHHhhcc--CCccHH----
Confidence 56889999999999999876 7789999999999873 44444433332 122233323222222 112212
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
.++...+.+...|.+.. .....++||+.++|+.|+++|++++++||. .....+.+++.+|+..+|+. +++.+++.
T Consensus 72 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~-~~~~~~~~ 146 (226)
T PRK13222 72 LLEKLRELFDRHYAENV-AGGSRLYPGVKETLAALKAAGYPLAVVTNK---PTPFVAPLLEALGIADYFSV-VIGGDSLP 146 (226)
T ss_pred HHHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCCccCccE-EEcCCCCC
Confidence 23445555555665544 234679999999999999999999999994 46788899999999988876 44443321
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|++ |+.++++++++|++|+
T Consensus 147 ~------------------------------------------~kp~~~~--------------~~~~~~~~~~~~~~~i 170 (226)
T PRK13222 147 N------------------------------------------KKPDPAP--------------LLLACEKLGLDPEEML 170 (226)
T ss_pred C------------------------------------------CCcChHH--------------HHHHHHHcCCChhheE
Confidence 1 2666555 9999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCC--CCCcEEecCCCcchHHH
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEF--PSANAVMDGFGGADLTI 370 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l--~~ad~vi~~l~e~~~~~ 370 (378)
+|||+.+|+++|+++|+++|++.++.....+. ..++++++++.++...+
T Consensus 171 ~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 171 FVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLL 221 (226)
T ss_pred EECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHH
Confidence 99999999999999999999999886543333 35899999999987654
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=215.55 Aligned_cols=212 Identities=16% Similarity=0.234 Sum_probs=157.9
Q ss_pred CCCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhh
Q 017067 80 NPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEK 159 (378)
Q Consensus 80 ~~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~ 159 (378)
.+..+++|+|||||||+|++.. +..+++++++++|++. ++.+.+..+.+. ... .+.++++++ .++
T Consensus 58 ~~~~~k~vIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~~--~~~~~~~~~~g~---~~~----~i~~~~~~~----~~~- 122 (273)
T PRK13225 58 YPQTLQAIIFDFDGTLVDSLPT-VVAIANAHAPDFGYDP--IDERDYAQLRQW---SSR----TIVRRAGLS----PWQ- 122 (273)
T ss_pred hhhhcCEEEECCcCccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHHhCc---cHH----HHHHHcCCC----HHH-
Confidence 3456899999999999999986 7899999999999863 555555555432 122 223334432 111
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhh
Q 017067 160 KAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 239 (378)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~ 239 (378)
.+.+.+.+.+.+.+.+ ..++++||+.++|+.|+++|++++|+||+ ....+..+++.+|+.++|+. +++.++
T Consensus 123 ---~~~~~~~~~~~~~~~~--~~~~l~pg~~e~L~~L~~~gi~laIvSn~---~~~~~~~~L~~~gl~~~F~~-vi~~~~ 193 (273)
T PRK13225 123 ---QARLLQRVQRQLGDCL--PALQLFPGVADLLAQLRSRSLCLGILSSN---SRQNIEAFLQRQGLRSLFSV-VQAGTP 193 (273)
T ss_pred ---HHHHHHHHHHHHHhhc--ccCCcCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCChhheEE-EEecCC
Confidence 2233334444443332 34678999999999999999999999995 46889999999999999986 333322
Q ss_pred HHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCc
Q 017067 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (378)
Q Consensus 240 ~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~ 319 (378)
+ + + + +.. |..++++++++|++
T Consensus 194 ~---------------------------------------------~-------~--k--~~~---~~~~l~~~~~~p~~ 214 (273)
T PRK13225 194 I---------------------------------------------L-------S--K--RRA---LSQLVAREGWQPAA 214 (273)
T ss_pred C---------------------------------------------C-------C--C--HHH---HHHHHHHhCcChhH
Confidence 1 0 0 1 112 88999999999999
Q ss_pred EEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC--CCcEEecCCCcchHHHHHHh
Q 017067 320 CFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP--SANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~--~ad~vi~~l~e~~~~~~~l~ 374 (378)
|+||||+.+|+++|+++||.+|++.++.....++. .++++++++.++...+..|+
T Consensus 215 ~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~~~~ 271 (273)
T PRK13225 215 VMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVTQLM 271 (273)
T ss_pred EEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999998877665443 58999999999987777665
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.5e-25 Score=201.65 Aligned_cols=208 Identities=17% Similarity=0.160 Sum_probs=137.9
Q ss_pred ccEEEEecccccccccccchHHHHHHH---HHHcCCCCCCCChhHHHHHHhh----ccCChHHHHHHHHHHcCCCCCCCc
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVA---FQKLGLDCANWTAPIYTDLLRK----SAGDEDRMLVLFFNRIGWPTSVPT 156 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~---~~~~gl~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~g~~~~l~~ 156 (378)
+++|+||+||||+|+... +..++..+ +.++|++ ++...+...+.. .+.........+...++... .
T Consensus 2 ~~~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 74 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGL-AEKARRNAIEVLIEAGLN---VDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEY--N- 74 (221)
T ss_pred ceEEEEeCCCCCcCCCCc-cCHHHHHHHHHHHHCCCc---CCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhc--C-
Confidence 689999999999999986 55665544 4567776 343333222211 11000000111111111100 0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeec
Q 017067 157 NEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVG 236 (378)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~ 236 (378)
.+...+.... +.... ...++++||+.++|+.|+++|++++|+||+ ........++.+|+..+|+. +++
T Consensus 75 ------~~~~~~~~~~-~~~~~-~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~---~~~~~~~~l~~~~l~~~f~~-i~~ 142 (221)
T TIGR02253 75 ------PKLVAAFVYA-YHKLK-FAYLRVYPGVRDTLMELRESGYRLGIITDG---LPVKQWEKLERLGVRDFFDA-VIT 142 (221)
T ss_pred ------HHHHHHHHHH-HHHHH-HHhCCCCCCHHHHHHHHHHCCCEEEEEeCC---chHHHHHHHHhCChHHhccE-EEE
Confidence 0011111111 11211 223679999999999999999999999994 45778889999999999987 444
Q ss_pred hhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCC
Q 017067 237 NEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP 316 (378)
Q Consensus 237 ~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~ 316 (378)
.+++.. .||+|++ |..+++++|++
T Consensus 143 ~~~~~~------------------------------------------~KP~~~~--------------~~~~~~~~~~~ 166 (221)
T TIGR02253 143 SEEEGV------------------------------------------EKPHPKI--------------FYAALKRLGVK 166 (221)
T ss_pred eccCCC------------------------------------------CCCCHHH--------------HHHHHHHcCCC
Confidence 444321 2666666 99999999999
Q ss_pred CCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCC---CCCCCCcEEecCCCcc
Q 017067 317 VRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSR---AEFPSANAVMDGFGGA 366 (378)
Q Consensus 317 p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~---~~l~~ad~vi~~l~e~ 366 (378)
|++|++|||+. +|+.+|+++||++|++.++.... .....++++++++.|+
T Consensus 167 ~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 167 PEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred hhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 99999999998 89999999999999999876543 2234578999998775
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-25 Score=202.24 Aligned_cols=198 Identities=21% Similarity=0.330 Sum_probs=145.6
Q ss_pred EEEecccccccccccchHHHHHHHHHH-cCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHHHH
Q 017067 87 VLLEVDGVLVDAYRFGNRQAFNVAFQK-LGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (378)
Q Consensus 87 viFDlDGTLid~~~~~~~~a~~~~~~~-~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i~~ 165 (378)
||||+||||+|+... +..++++++.+ +|.+. ++.+.+...++. .... +.+.++.+. .. .+.
T Consensus 1 iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~---~~~~----~~~~~~~~~----~~----~~~ 62 (205)
T TIGR01454 1 VVFDLDGVLVDSFAV-MREAFAIAYREVVGDGP--APFEEYRRHLGR---YFPD----IMRIMGLPL----EM----EEP 62 (205)
T ss_pred CeecCcCccccCHHH-HHHHHHHHHHHhcCCCC--CCHHHHHHHhCc---cHHH----HHHHcCCCH----HH----HHH
Confidence 699999999999997 88999999988 47652 444444444321 1122 223344321 00 111
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhh
Q 017067 166 VLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245 (378)
Q Consensus 166 ~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~ 245 (378)
.. ...+ . + ....+++||+.++|+.|+++|++++|+||. ....++..++.+|+.++|+. +++.++..
T Consensus 63 ~~---~~~~-~-~-~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~---~~~~~~~~l~~~~l~~~f~~-i~~~~~~~---- 128 (205)
T TIGR01454 63 FV---RESY-R-L-AGEVEVFPGVPELLAELRADGVGTAIATGK---SGPRARSLLEALGLLPLFDH-VIGSDEVP---- 128 (205)
T ss_pred HH---HHHH-H-h-hcccccCCCHHHHHHHHHHCCCeEEEEeCC---chHHHHHHHHHcCChhheee-EEecCcCC----
Confidence 11 1111 1 1 235789999999999999999999999995 45788899999999999987 44443321
Q ss_pred hccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeC
Q 017067 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (378)
Q Consensus 246 ~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGD 325 (378)
..||+|++ |+.+++++|++|++|+||||
T Consensus 129 --------------------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~l~igD 156 (205)
T TIGR01454 129 --------------------------------------RPKPAPDI--------------VREALRLLDVPPEDAVMVGD 156 (205)
T ss_pred --------------------------------------CCCCChHH--------------HHHHHHHcCCChhheEEEcC
Confidence 12666665 99999999999999999999
Q ss_pred CHhHHHHHHHcCCCEEEEcCCCCCCCCCC--CCcEEecCCCcchH
Q 017067 326 SQSGVAGAQRIGMPCVVMRSSLTSRAEFP--SANAVMDGFGGADL 368 (378)
Q Consensus 326 s~~Di~aA~~aG~~~i~v~~~~~~~~~l~--~ad~vi~~l~e~~~ 368 (378)
+.+|+++|+++||++|++.++.....++. .++++++++.++..
T Consensus 157 ~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~ 201 (205)
T TIGR01454 157 AVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLA 201 (205)
T ss_pred CHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHH
Confidence 99999999999999999998887665554 48999999988754
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.1e-25 Score=209.55 Aligned_cols=215 Identities=17% Similarity=0.190 Sum_probs=152.7
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
..+++|||||||||+|+... +..+++.++.++|.+. .+...+....+ .....+...+.........++. .
T Consensus 11 ~~~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g---~~~~~~~~~~l~~~~~~~~~~~----~ 80 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSVPD-LAAAVDRMLLELGRPP--AGLEAVRHWVG---NGAPVLVRRALAGSIDHDGVDD----E 80 (272)
T ss_pred ccCCEEEEcCCCccccCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhC---hhHHHHHHHHhcccccccCCCH----H
Confidence 34679999999999999997 8899999999999873 33333333332 1122222222111100111111 1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
..+.+.+.+.+.|... ....+++||+.++|+.|+++|++++|+||+ ....++.+++.+++..+|+. +++.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~--~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~---~~~~~~~~l~~~~i~~~f~~-i~~~d~~~ 154 (272)
T PRK13223 81 LAEQALALFMEAYADS--HELTVVYPGVRDTLKWLKKQGVEMALITNK---PERFVAPLLDQMKIGRYFRW-IIGGDTLP 154 (272)
T ss_pred HHHHHHHHHHHHHHhc--CcCCccCCCHHHHHHHHHHCCCeEEEEECC---cHHHHHHHHHHcCcHhhCeE-EEecCCCC
Confidence 2334444444444432 123568999999999999999999999994 45788889999999999886 45543321
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|++ |+.+++++|++|++|+
T Consensus 155 ~------------------------------------------~Kp~p~~--------------~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 155 Q------------------------------------------KKPDPAA--------------LLFVMKMAGVPPSQSL 178 (272)
T ss_pred C------------------------------------------CCCCcHH--------------HHHHHHHhCCChhHEE
Confidence 1 1666555 9999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC--CCcEEecCCCcchH
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP--SANAVMDGFGGADL 368 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~--~ad~vi~~l~e~~~ 368 (378)
+|||+.+||++|+++||++++|.++.....++. .++++++++.++..
T Consensus 179 ~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~ 227 (272)
T PRK13223 179 FVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLP 227 (272)
T ss_pred EECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHH
Confidence 999999999999999999999998876554443 58999999999853
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.1e-25 Score=196.37 Aligned_cols=184 Identities=24% Similarity=0.338 Sum_probs=134.5
Q ss_pred EEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHHHH
Q 017067 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (378)
Q Consensus 86 aviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i~~ 165 (378)
+|+||+||||+|+... +..+|+++++++|++ ++......+.+ .........+..+.+.+. +.++ +..
T Consensus 1 ~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~--~~~~----~~~ 67 (185)
T TIGR01990 1 AVIFDLDGVITDTAEY-HYLAWKALADELGIP---FDEEFNESLKG---VSREDSLERILDLGGKKY--SEEE----KEE 67 (185)
T ss_pred CeEEcCCCccccChHH-HHHHHHHHHHHcCCC---CCHHHHHHhcC---CChHHHHHHHHHhcCCCC--CHHH----HHH
Confidence 5899999999999997 889999999999987 45443333322 223444555666665532 2122 233
Q ss_pred HHHHHHHHHHHHHhc-CCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhh
Q 017067 166 VLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSL 244 (378)
Q Consensus 166 ~~~~~~~~~~~~l~~-~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~ 244 (378)
+.+...+.|.+.+.. ....++||+.++|+.|+++|++++|+||+. ....+++.+|+..+|+. +++++++..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~-----~~~~~l~~~~l~~~f~~-~~~~~~~~~-- 139 (185)
T TIGR01990 68 LAERKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASK-----NAPTVLEKLGLIDYFDA-IVDPAEIKK-- 139 (185)
T ss_pred HHHHHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCc-----cHHHHHHhcCcHhhCcE-EEehhhcCC--
Confidence 334444444444321 234689999999999999999999999942 24578999999999987 444444321
Q ss_pred hhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEe
Q 017067 245 YGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIA 324 (378)
Q Consensus 245 ~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VG 324 (378)
.||+|++ |+.++++++++|++|++||
T Consensus 140 ----------------------------------------~kp~p~~--------------~~~~~~~~~~~~~~~v~vg 165 (185)
T TIGR01990 140 ----------------------------------------GKPDPEI--------------FLAAAEGLGVSPSECIGIE 165 (185)
T ss_pred ----------------------------------------CCCChHH--------------HHHHHHHcCCCHHHeEEEe
Confidence 2666666 9999999999999999999
Q ss_pred CCHhHHHHHHHcCCCEEEEc
Q 017067 325 GSQSGVAGAQRIGMPCVVMR 344 (378)
Q Consensus 325 Ds~~Di~aA~~aG~~~i~v~ 344 (378)
|+.+|+++|+++||++|+|.
T Consensus 166 D~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 166 DAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred cCHHHHHHHHHcCCEEEecC
Confidence 99999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-24 Score=194.33 Aligned_cols=185 Identities=23% Similarity=0.352 Sum_probs=135.6
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHH
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i 163 (378)
+++|+||+||||+|+... +..+|..+++++|++ ++.. +...+ .+.........+....+. .++.++ +
T Consensus 1 ~~~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~-~~~~~--~g~~~~~~~~~~~~~~~~--~~~~~~----~ 67 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPL-HAQAWKHLADKYGIE---FDKQ-YNTSL--GGLSREDILRAILKLRKP--GLSLET----I 67 (185)
T ss_pred CCeEEEcCCCcccCChHH-HHHHHHHHHHHcCCC---CCHH-HHHHc--CCCCHHHHHHHHHHhcCC--CCCHHH----H
Confidence 478999999999999986 889999999999987 4432 22211 122233344445554431 122122 3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHh
Q 017067 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (378)
Q Consensus 164 ~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~ 243 (378)
..+.+.+.+.|.+.+......++||+.++|+.|+++|++++++||+ ..++.+++.+|+.++|+. +++.++...
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~-----~~~~~~l~~~~l~~~f~~-v~~~~~~~~- 140 (185)
T TIGR02009 68 HQLAERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS-----KNADRILAKLGLTDYFDA-IVDADEVKE- 140 (185)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc-----hhHHHHHHHcChHHHCCE-eeehhhCCC-
Confidence 3444455555555553345789999999999999999999999993 557889999999999987 444433211
Q ss_pred hhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 017067 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (378)
Q Consensus 244 ~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~V 323 (378)
.||+|++ |..+++++|++|++|++|
T Consensus 141 -----------------------------------------~kp~~~~--------------~~~~~~~~~~~~~~~v~I 165 (185)
T TIGR02009 141 -----------------------------------------GKPHPET--------------FLLAAELLGVSPNECVVF 165 (185)
T ss_pred -----------------------------------------CCCChHH--------------HHHHHHHcCCCHHHeEEE
Confidence 2666665 999999999999999999
Q ss_pred eCCHhHHHHHHHcCCCEEEE
Q 017067 324 AGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 324 GDs~~Di~aA~~aG~~~i~v 343 (378)
||+.+|+++|+++||++|+|
T Consensus 166 gD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 166 EDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred eCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.8e-24 Score=198.07 Aligned_cols=210 Identities=14% Similarity=0.175 Sum_probs=137.5
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhH-
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK- 160 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~- 160 (378)
|++++|+||+||||+|... ..++.++++++|++ ++...+..+... + . .....+ . .+ .+...+..
T Consensus 1 m~~k~iiFDlDGTLid~~~---~~~~~~~~~~~g~~---~~~~~~~~~~~~--~-~-~~~~~~-~-~~---~~~~~~~~~ 65 (224)
T PRK09449 1 MKYDWILFDADETLFHFDA---FAGLQRMFSRYGVD---FTAEDFQDYQAV--N-K-PLWVDY-Q-NG---AITALQLQH 65 (224)
T ss_pred CCccEEEEcCCCchhcchh---hHHHHHHHHHhCCC---CcHHHHHHHHHH--H-H-HHHHHH-H-cC---CCCHHHHHH
Confidence 3589999999999998543 47888999999986 344434333111 0 0 010000 0 00 00000000
Q ss_pred HHHHHH-------HHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchhe
Q 017067 161 AFVKNV-------LQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK 233 (378)
Q Consensus 161 ~~i~~~-------~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~ 233 (378)
...+.+ .+...+.|.+.+ .....++||+.++|+.|+ +|++++|+||+ .....+..++.+|+..+|+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~---~~~~~~~~l~~~~l~~~fd~v 140 (224)
T PRK09449 66 TRFESWAEKLNVTPGELNSAFLNAM-AEICTPLPGAVELLNALR-GKVKMGIITNG---FTELQQVRLERTGLRDYFDLL 140 (224)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHH-hhcCccCccHHHHHHHHH-hCCeEEEEeCC---cHHHHHHHHHhCChHHHcCEE
Confidence 000000 011223333333 223679999999999999 57999999994 467888899999999999884
Q ss_pred eechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHc
Q 017067 234 IVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA 313 (378)
Q Consensus 234 iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~l 313 (378)
++++++.. .||+|++ |..+++++
T Consensus 141 -~~~~~~~~------------------------------------------~KP~p~~--------------~~~~~~~~ 163 (224)
T PRK09449 141 -VISEQVGV------------------------------------------AKPDVAI--------------FDYALEQM 163 (224)
T ss_pred -EEECccCC------------------------------------------CCCCHHH--------------HHHHHHHc
Confidence 44433321 2777766 99999999
Q ss_pred CCC-CCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchH
Q 017067 314 EKP-VRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADL 368 (378)
Q Consensus 314 gv~-p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~ 368 (378)
|+. +++|+||||+. +|+++|+++||++|++..+......-..++++++++.++..
T Consensus 164 ~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~ 220 (224)
T PRK09449 164 GNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQ 220 (224)
T ss_pred CCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHH
Confidence 985 58999999998 69999999999999997542221122257999999988754
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-24 Score=193.92 Aligned_cols=183 Identities=19% Similarity=0.277 Sum_probs=134.3
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
++++|+||+||||+|+... +..+|.+++.++|++ ++...... ..+.....+...+....+.. ..
T Consensus 4 ~~~~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~---~~~~~~~~---~~g~~~~~~~~~~~~~~~~~--~~------- 67 (188)
T PRK10725 4 RYAGLIFDMDGTILDTEPT-HRKAWREVLGRYGLQ---FDEQAMVA---LNGSPTWRIAQAIIELNQAD--LD------- 67 (188)
T ss_pred cceEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCC---CCHHHHHH---hcCCCHHHHHHHHHHHhCCC--CC-------
Confidence 4789999999999999987 889999999999986 44332222 22222333444455544422 11
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
.+.+...+...+.+.+ ....+++|+ .++|..|+++ ++++|+||+ ....++.+++.+|+..+|+. +++.+++..
T Consensus 68 ~~~~~~~~~~~~~~~~-~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~---~~~~~~~~l~~~~l~~~fd~-i~~~~~~~~ 140 (188)
T PRK10725 68 PHALAREKTEAVKSML-LDSVEPLPL-IEVVKAWHGR-RPMAVGTGS---ESAIAEALLAHLGLRRYFDA-VVAADDVQH 140 (188)
T ss_pred HHHHHHHHHHHHHHHH-hccCCCccH-HHHHHHHHhC-CCEEEEcCC---chHHHHHHHHhCCcHhHceE-EEehhhccC
Confidence 1122333334444443 344567886 5899999876 899999994 46888999999999999997 566555422
Q ss_pred hhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017067 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (378)
Q Consensus 243 ~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~ 322 (378)
.||+|++ |..+++++|++|++||+
T Consensus 141 ------------------------------------------~KP~p~~--------------~~~~~~~~~~~~~~~l~ 164 (188)
T PRK10725 141 ------------------------------------------HKPAPDT--------------FLRCAQLMGVQPTQCVV 164 (188)
T ss_pred ------------------------------------------CCCChHH--------------HHHHHHHcCCCHHHeEE
Confidence 2777666 99999999999999999
Q ss_pred EeCCHhHHHHHHHcCCCEEEEc
Q 017067 323 IAGSQSGVAGAQRIGMPCVVMR 344 (378)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~ 344 (378)
|||+.+|+++|+++||++|.+.
T Consensus 165 igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 165 FEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred EeccHhhHHHHHHCCCEEEeec
Confidence 9999999999999999999986
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-24 Score=197.72 Aligned_cols=206 Identities=14% Similarity=0.173 Sum_probs=143.3
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhc---------cCC-hHHH----HHHHHHHcC
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS---------AGD-EDRM----LVLFFNRIG 149 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~---------~g~-~~~~----~~~~~~~~g 149 (378)
+++|+||+||||+|+... +..++.++++++|++ .+...+..+.... ++. .... +..+.++++
T Consensus 1 ~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAA-EALALRLLFEDQGIP---LTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYN 76 (224)
T ss_pred CCEEEEcCcCcccccchH-HHHHHHHHHHHhCCC---ccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhC
Confidence 579999999999999986 778899999999986 2323222221110 000 0000 111122222
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc
Q 017067 150 WPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (378)
Q Consensus 150 ~~~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~ 229 (378)
.+.. .+...+.|.+.. .....++||+.++|+.|+++ ++++|+||+ ....+..+++.+|+..+
T Consensus 77 ~~~~-------------~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~---~~~~~~~~l~~~~l~~~ 138 (224)
T TIGR02254 77 TEAD-------------EALLNQKYLRFL-EEGHQLLPGAFELMENLQQK-FRLYIVTNG---VRETQYKRLRKSGLFPF 138 (224)
T ss_pred CCCc-------------HHHHHHHHHHHH-hccCeeCccHHHHHHHHHhc-CcEEEEeCC---chHHHHHHHHHCCcHhh
Confidence 1100 011233333333 23467999999999999999 999999994 46888899999999999
Q ss_pred chheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHH
Q 017067 230 SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAG 309 (378)
Q Consensus 230 f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a 309 (378)
|+. +++++++. ..||+|++ |..+
T Consensus 139 fd~-i~~~~~~~------------------------------------------~~KP~~~~--------------~~~~ 161 (224)
T TIGR02254 139 FDD-IFVSEDAG------------------------------------------IQKPDKEI--------------FNYA 161 (224)
T ss_pred cCE-EEEcCccC------------------------------------------CCCCCHHH--------------HHHH
Confidence 987 44443321 12777766 9999
Q ss_pred HHHc-CCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchH
Q 017067 310 AEYA-EKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADL 368 (378)
Q Consensus 310 ~~~l-gv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~ 368 (378)
++++ |++|++|+||||+. +|+++|+++||++|++..+.........++++++++.|+..
T Consensus 162 ~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 222 (224)
T TIGR02254 162 LERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYE 222 (224)
T ss_pred HHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHh
Confidence 9999 99999999999998 79999999999999998764443333457899999988743
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-24 Score=219.00 Aligned_cols=216 Identities=12% Similarity=0.138 Sum_probs=152.8
Q ss_pred CCCccEEEEecccccccccccchHHHHHHHHHHcCCC--CCCC-ChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCch
Q 017067 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD--CANW-TAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTN 157 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~--~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~ 157 (378)
.+.+++|||||||||+|+... +..+|++++++++.. +..+ +...+...+ +.........+....+.+
T Consensus 238 ~~m~k~vIFDlDGTLiDs~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~---G~~~~~~~~~l~~~~~~~------ 307 (459)
T PRK06698 238 NEMLQALIFDMDGTLFQTDKI-LELSLDDTFDHLRSLQLWDTVTPIDKYREIM---GVPLPKVWEALLPDHSLE------ 307 (459)
T ss_pred HHhhhheeEccCCceecchhH-HHHHHHHHHHHHhhhcccCCCCCHHHHHHHc---CCChHHHHHHHhhhcchh------
Confidence 345799999999999999997 889999999998421 0011 223333332 222333333333322211
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
..+.....+.+.+...+.....+++||+.++|+.|+++|++++|+||+ ....+..+++.+|+.++|+. +++.
T Consensus 308 ----~~~~~~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~---~~~~~~~~l~~~~l~~~f~~-i~~~ 379 (459)
T PRK06698 308 ----IREQTDAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNG---LTEYLRAIVSYYDLDQWVTE-TFSI 379 (459)
T ss_pred ----HHHHHHHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCC---chHHHHHHHHHCCcHhhcce-eEec
Confidence 112223333344444443445789999999999999999999999994 46889999999999999988 4454
Q ss_pred hhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCC
Q 017067 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (378)
Q Consensus 238 ~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p 317 (378)
+++.. ||.|++ |..++++++ |
T Consensus 380 d~v~~-------------------------------------------~~kP~~--------------~~~al~~l~--~ 400 (459)
T PRK06698 380 EQINS-------------------------------------------LNKSDL--------------VKSILNKYD--I 400 (459)
T ss_pred CCCCC-------------------------------------------CCCcHH--------------HHHHHHhcC--c
Confidence 43311 333333 888888875 7
Q ss_pred CcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHH
Q 017067 318 RNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKL 373 (378)
Q Consensus 318 ~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l 373 (378)
++|++|||+.+|+++|+++||.+|++.++.....++..+|++++++.++...+...
T Consensus 401 ~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~~ 456 (459)
T PRK06698 401 KEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGILSTV 456 (459)
T ss_pred ceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999988766566777999999999987655443
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-23 Score=231.96 Aligned_cols=219 Identities=21% Similarity=0.289 Sum_probs=159.5
Q ss_pred CCCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhh
Q 017067 80 NPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEK 159 (378)
Q Consensus 80 ~~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~ 159 (378)
.-+++++|+|||||||+|+... +..+|.++++++|++ ++.+.+..++. .....+...+....+++....
T Consensus 71 ~~~~ikaVIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~---it~e~~~~~~G---~~~~~~~~~~~~~~~l~~~~~---- 139 (1057)
T PLN02919 71 EWGKVSAVLFDMDGVLCNSEEP-SRRAAVDVFAEMGVE---VTVEDFVPFMG---TGEANFLGGVASVKGVKGFDP---- 139 (1057)
T ss_pred cCCCCCEEEECCCCCeEeChHH-HHHHHHHHHHHcCCC---CCHHHHHHHhC---CCHHHHHHHHHHhcCCCCCCH----
Confidence 3457899999999999999997 889999999999987 56555544442 233444444444444432111
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc-ccchheeech
Q 017067 160 KAFVKNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGN 237 (378)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~l~~-~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~-~~f~~~iv~~ 237 (378)
+...+.+.+.|.+.+.. ....++||+.++|+.|+++|++++|+||+ ....++..++.+|+. .+|+. +++.
T Consensus 140 ----~~~~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~---~~~~~~~~L~~~gl~~~~Fd~-iv~~ 211 (1057)
T PLN02919 140 ----DAAKKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSA---DRIKVDANLAAAGLPLSMFDA-IVSA 211 (1057)
T ss_pred ----HHHHHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCC---cHHHHHHHHHHcCCChhHCCE-EEEC
Confidence 11222223333332211 12347999999999999999999999995 457888899999996 78887 4555
Q ss_pred hhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCC
Q 017067 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (378)
Q Consensus 238 ~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p 317 (378)
+++.. .||+|++ |..+++++|++|
T Consensus 212 ~~~~~------------------------------------------~KP~Pe~--------------~~~a~~~lgv~p 235 (1057)
T PLN02919 212 DAFEN------------------------------------------LKPAPDI--------------FLAAAKILGVPT 235 (1057)
T ss_pred ccccc------------------------------------------CCCCHHH--------------HHHHHHHcCcCc
Confidence 44322 2777776 999999999999
Q ss_pred CcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCC--CCCcEEecCCCcchHHHHHHhhc
Q 017067 318 RNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEF--PSANAVMDGFGGADLTISKLRHS 376 (378)
Q Consensus 318 ~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l--~~ad~vi~~l~e~~~~~~~l~~~ 376 (378)
++|++|||+.+|+++|+++||++|++.++... .++ ..++++++++.++ .+..++.+
T Consensus 236 ~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~-~~L~~~~a~~vi~~l~el--~~~~~~~~ 293 (1057)
T PLN02919 236 SECVVIEDALAGVQAARAAGMRCIAVTTTLSE-EILKDAGPSLIRKDIGNI--SLSDILTG 293 (1057)
T ss_pred ccEEEEcCCHHHHHHHHHcCCEEEEECCCCCH-HHHhhCCCCEEECChHHC--CHHHHHhc
Confidence 99999999999999999999999999988543 444 3579999999998 45555544
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=195.96 Aligned_cols=132 Identities=17% Similarity=0.165 Sum_probs=104.4
Q ss_pred CCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcch
Q 017067 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (378)
Q Consensus 181 ~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~ 260 (378)
....++||+.++|+.|+++|++++|+||+ ....++..++.+|+.++|+. +++++++..
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~---~~~~~~~~l~~~~l~~~fd~-iv~s~~~~~------------------ 147 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNA---HPHNLAVKLEHTGLDAHLDL-LLSTHTFGY------------------ 147 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCc---CHHHHHHHHHHCCcHHHCCE-EEEeeeCCC------------------
Confidence 34679999999999999999999999994 45788888999999999987 444444321
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCC-
Q 017067 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP- 339 (378)
Q Consensus 261 ~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~- 339 (378)
.||+|++ |..+++++|++|++|+||||+.+|+++|+++||+
T Consensus 148 ------------------------~KP~p~~--------------~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 148 ------------------------PKEDQRL--------------WQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred ------------------------CCCCHHH--------------HHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 2666666 9999999999999999999999999999999998
Q ss_pred EEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHHh
Q 017067 340 CVVMRSSLTSRAEFPSANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 340 ~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l~ 374 (378)
++.|.++.+...+ .+..+.+++.++...+..|.
T Consensus 190 ~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~ 222 (224)
T PRK14988 190 CLGVTNPDSGIAE--KQYQRHPSLNDYRRLIPSLM 222 (224)
T ss_pred EEEEeCCCCCccc--hhccCCCcHHHHHHHhhhhc
Confidence 5678877554332 34555667777665565553
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-23 Score=189.12 Aligned_cols=183 Identities=17% Similarity=0.232 Sum_probs=124.6
Q ss_pred cEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHH----Hhh----------ccCCh-H----HHHHHHH
Q 017067 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDL----LRK----------SAGDE-D----RMLVLFF 145 (378)
Q Consensus 85 kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~----~~~----------~~g~~-~----~~~~~~~ 145 (378)
++|+||+||||+|+... +..+++++++++|++ ++...+... ... ..|.. . .+....+
T Consensus 1 k~viFDlDGTL~d~~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 76 (203)
T TIGR02252 1 KLITFDAVGTLLALKEP-VGEVYCEIARKYGVE---VSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTF 76 (203)
T ss_pred CeEEEecCCceeeeCCC-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 58999999999999886 789999999999997 333222211 110 00212 1 1122223
Q ss_pred HHcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhC
Q 017067 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG 225 (378)
Q Consensus 146 ~~~g~~~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lg 225 (378)
...+.+. .+ .+.+.....+..+.......++||+.++|+.|+++|++++|+||+. . ..+..++.+|
T Consensus 77 ~~~~~~~---~~-------~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~---~-~~~~~l~~~~ 142 (203)
T TIGR02252 77 GRAGVPD---PE-------SFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFD---S-RLRGLLEALG 142 (203)
T ss_pred HhcCCCC---ch-------hHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCc---h-hHHHHHHHCC
Confidence 3333211 01 1122222222222212245789999999999999999999999954 2 3577899999
Q ss_pred ccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHH
Q 017067 226 SERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 305 (378)
Q Consensus 226 i~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a 305 (378)
+..+|+. +++++++. ..||+|++
T Consensus 143 l~~~fd~-i~~s~~~~------------------------------------------~~KP~~~~-------------- 165 (203)
T TIGR02252 143 LLEYFDF-VVTSYEVG------------------------------------------AEKPDPKI-------------- 165 (203)
T ss_pred cHHhcce-EEeecccC------------------------------------------CCCCCHHH--------------
Confidence 9999987 44443321 12777666
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEE
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVV 342 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~ 342 (378)
|..+++++|++|++|++|||+. +||++|+++||++|+
T Consensus 166 ~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 166 FQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred HHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 9999999999999999999997 899999999999885
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.4e-23 Score=191.91 Aligned_cols=202 Identities=20% Similarity=0.306 Sum_probs=143.3
Q ss_pred cccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHH
Q 017067 91 VDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEK 170 (378)
Q Consensus 91 lDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i~~~~~~~ 170 (378)
|||||+|+... +..+|.++++++|++ ++.+.+..++ +.....+...+...++++.....+ .+.+..
T Consensus 1 ~DGTL~Ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~---G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 66 (220)
T PLN02811 1 MDGLLLDTEKF-YTEVQEKILARYGKT---FDWSLKAKMM---GKKAIEAARIFVEESGLSDSLSPE-------DFLVER 66 (220)
T ss_pred CCCcceecHHH-HHHHHHHHHHHcCCC---CCHHHHHHcc---CCCHHHHHHHHHHHhCCCCCCCHH-------HHHHHH
Confidence 79999999997 899999999999986 4444333333 223344555666666655322111 122222
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechh--hHHHhhhhcc
Q 017067 171 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE--EVERSLYGQF 248 (378)
Q Consensus 171 ~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~--~~~~~~~~~~ 248 (378)
...+.+.. ...+++||+.++|+.|+++|++++|+||+.+ ........+..++.++|+. +++.+ ++..
T Consensus 67 ~~~~~~~~--~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~--~~~~~~~~~~~~l~~~f~~-i~~~~~~~~~~------ 135 (220)
T PLN02811 67 EAMLQDLF--PTSDLMPGAERLVRHLHAKGIPIAIATGSHK--RHFDLKTQRHGELFSLMHH-VVTGDDPEVKQ------ 135 (220)
T ss_pred HHHHHHHH--hhCCCCccHHHHHHHHHHCCCcEEEEeCCch--hhHHHHHcccHHHHhhCCE-EEECChhhccC------
Confidence 22222222 2367899999999999999999999999642 2233334444577788876 44444 3211
Q ss_pred ccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcC---CCCCcEEEEeC
Q 017067 249 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE---KPVRNCFLIAG 325 (378)
Q Consensus 249 v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lg---v~p~~~i~VGD 325 (378)
.||+|++ |..+++++| ++|++|+||||
T Consensus 136 ------------------------------------~KP~p~~--------------~~~a~~~~~~~~~~~~~~v~IgD 165 (220)
T PLN02811 136 ------------------------------------GKPAPDI--------------FLAAARRFEDGPVDPGKVLVFED 165 (220)
T ss_pred ------------------------------------CCCCcHH--------------HHHHHHHhCCCCCCccceEEEec
Confidence 2777777 999999997 99999999999
Q ss_pred CHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 326 SQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 326 s~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
+.+|+++|+++||++|++.++......+..+|++++++.++.
T Consensus 166 s~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~ 207 (220)
T PLN02811 166 APSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFK 207 (220)
T ss_pred cHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCC
Confidence 999999999999999999887655445667899999999875
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-23 Score=189.62 Aligned_cols=105 Identities=16% Similarity=0.252 Sum_probs=91.6
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.+++||+.++|+.|+++|++++|+||+ ....++.+++.+|+.++|+. +++++++..
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~---~~~~~~~~l~~~gl~~~fd~-i~~s~~~~~-------------------- 146 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNG---SPAMLKSLVKHAGLDDPFDA-VLSADAVRA-------------------- 146 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHCCChhhhhe-eEehhhcCC--------------------
Confidence 568999999999999999999999994 46888899999999999987 555544422
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
.||+|++ |+.+++++|++|++|++|||+.+|+++|+++||++|+
T Consensus 147 ----------------------~KP~~~~--------------~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~ 190 (198)
T TIGR01428 147 ----------------------YKPAPQV--------------YQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAW 190 (198)
T ss_pred ----------------------CCCCHHH--------------HHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEE
Confidence 2777666 9999999999999999999999999999999999999
Q ss_pred EcCCC
Q 017067 343 MRSSL 347 (378)
Q Consensus 343 v~~~~ 347 (378)
+..+.
T Consensus 191 v~r~~ 195 (198)
T TIGR01428 191 VNRPG 195 (198)
T ss_pred ecCCC
Confidence 98753
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-22 Score=189.08 Aligned_cols=211 Identities=14% Similarity=0.092 Sum_probs=137.0
Q ss_pred CCCccEEEEecccccccccccchHHHHHHHHHHcCCC---CCCCChhHHHHHHhhccC-----------ChHHHHHHHHH
Q 017067 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD---CANWTAPIYTDLLRKSAG-----------DEDRMLVLFFN 146 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~---~~~~~~~~~~~~~~~~~g-----------~~~~~~~~~~~ 146 (378)
..++++|+||+||||+|+... +..+++++++.++.. ...|+...+..+...... .....+..+.+
T Consensus 7 ~~~~k~iiFDlDGTL~D~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 85 (238)
T PRK10748 7 LGRISALTFDLDDTLYDNRPV-ILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAML 85 (238)
T ss_pred CCCceeEEEcCcccccCChHH-HHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHH
Confidence 345789999999999999886 778888777655211 112433333332221100 00112233444
Q ss_pred HcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCc
Q 017067 147 RIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (378)
Q Consensus 147 ~~g~~~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi 226 (378)
++|.+. ++ .+...+.....+.... ....++||+.++|+.|+++ ++++|+||++ .. ++.+|+
T Consensus 86 ~~g~~~----~~----~~~~~~~~~~~~~~~~--~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~---~~-----~~~~gl 146 (238)
T PRK10748 86 DAGLSA----EE----ASAGADAAMINFAKWR--SRIDVPQATHDTLKQLAKK-WPLVAITNGN---AQ-----PELFGL 146 (238)
T ss_pred HcCCCH----HH----HHHHHHHHHHHHHHHh--hcCCCCccHHHHHHHHHcC-CCEEEEECCC---ch-----HHHCCc
Confidence 555431 11 0111122222232221 2367999999999999976 9999999954 22 478899
Q ss_pred cccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHH
Q 017067 227 ERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAAL 306 (378)
Q Consensus 227 ~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~ 306 (378)
.++|+. ++++++... .||+|++ |
T Consensus 147 ~~~fd~-i~~~~~~~~------------------------------------------~KP~p~~--------------~ 169 (238)
T PRK10748 147 GDYFEF-VLRAGPHGR------------------------------------------SKPFSDM--------------Y 169 (238)
T ss_pred HHhhce-eEecccCCc------------------------------------------CCCcHHH--------------H
Confidence 999987 444444322 2666666 9
Q ss_pred HHHHHHcCCCCCcEEEEeCC-HhHHHHHHHcCCCEEEEcCCCCCC-CC---CCCCcEEecCCCcchH
Q 017067 307 RAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSSLTSR-AE---FPSANAVMDGFGGADL 368 (378)
Q Consensus 307 ~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~-~~---l~~ad~vi~~l~e~~~ 368 (378)
..+++++|++|++|+||||+ .+||.+|+++||++|++..+.... .. -..++.++.+|.|+..
T Consensus 170 ~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~ 236 (238)
T PRK10748 170 HLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTS 236 (238)
T ss_pred HHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHh
Confidence 99999999999999999999 599999999999999998764331 11 1237889999988754
|
|
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.7e-22 Score=181.65 Aligned_cols=209 Identities=21% Similarity=0.300 Sum_probs=154.4
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
..+.+++||+||||+||+.. +..+++..+.++|.+ ++.......+ +....++.+.+...+..+.+ .
T Consensus 8 ~~~~~~lfD~dG~lvdte~~-y~~~~~~~~~~ygk~---~~~~~~~~~m---G~~~~eaa~~~~~~~~dp~s--~----- 73 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDL-YTEAWQELLDRYGKP---YPWDVKVKSM---GKRTSEAARLFVKKLPDPVS--R----- 73 (222)
T ss_pred cceeeEEEecCCcEEecHHH-HHHHHHHHHHHcCCC---ChHHHHHHHc---CCCHHHHHHHHHhhcCCCCC--H-----
Confidence 34668999999999999998 889999999999986 5555444433 33456677777655544433 2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhC-ccccchheeech-hh
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGN-EE 239 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lg-i~~~f~~~iv~~-~~ 239 (378)
+++..+..+...+++ ....+.||+.++++.|+.+|++++++|++++ ......+..++ +...|...+++. .+
T Consensus 74 --ee~~~e~~~~~~~~~--~~~~~~PGa~kLv~~L~~~gip~alat~s~~---~~~~~k~~~~~~~~~~f~~~v~~d~~~ 146 (222)
T KOG2914|consen 74 --EEFNKEEEEILDRLF--MNSILMPGAEKLVNHLKNNGIPVALATSSTS---ASFELKISRHEDIFKNFSHVVLGDDPE 146 (222)
T ss_pred --HHHHHHHHHHHHHhc--cccccCCcHHHHHHHHHhCCCCeeEEecCCc---ccHHHHHHHhhHHHHhcCCCeecCCcc
Confidence 233344444444443 2466899999999999999999999999653 55556666665 777777655422 12
Q ss_pred HHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCC-C
Q 017067 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-R 318 (378)
Q Consensus 240 ~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p-~ 318 (378)
+.+ .||+||+ |..|++++|..| +
T Consensus 147 v~~------------------------------------------gKP~Pdi--------------~l~A~~~l~~~~~~ 170 (222)
T KOG2914|consen 147 VKN------------------------------------------GKPDPDI--------------YLKAAKRLGVPPPS 170 (222)
T ss_pred ccC------------------------------------------CCCCchH--------------HHHHHHhcCCCCcc
Confidence 221 2777777 999999999998 9
Q ss_pred cEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 319 NCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 319 ~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
.|++++|++.++++|++|||++|++++..-...-...++.+++++.+..
T Consensus 171 k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~~~ 219 (222)
T KOG2914|consen 171 KCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLEDFK 219 (222)
T ss_pred ceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecccccccC
Confidence 9999999999999999999999999996444444455889999988764
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-22 Score=176.76 Aligned_cols=175 Identities=22% Similarity=0.384 Sum_probs=125.3
Q ss_pred EEEecccccccccccchHHHHHH-HHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHHHH
Q 017067 87 VLLEVDGVLVDAYRFGNRQAFNV-AFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (378)
Q Consensus 87 viFDlDGTLid~~~~~~~~a~~~-~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i~~ 165 (378)
|+||+||||+|+... +..++.. ++++++.+ ++...+.... +.....+...+....+..
T Consensus 1 iifD~dgtL~d~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-------------- 59 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPA-IFRALQRLALEEFGLE---ISAEELRELF---GKSYEEALERLLERFGID-------------- 59 (176)
T ss_dssp EEEESBTTTEEHHHH-HHHHHHHHHHHHTTHH---HHHHHHHHHT---TSHHHHHHHHHHHHHHHH--------------
T ss_pred cEEECCCCcEeCHHH-HHHHHHHHHHHHhCCC---CCHHHHHHHh---CCCHHHHHHHhhhccchh--------------
Confidence 799999999999885 6778877 47777765 2222222222 112223333333333211
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhh
Q 017067 166 VLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245 (378)
Q Consensus 166 ~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~ 245 (378)
.....+.+.+.......+++||+.++|+.|+++|++++++|| +....+...++.+|+.++|+. +++.++...
T Consensus 60 -~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn---~~~~~~~~~l~~~~~~~~f~~-i~~~~~~~~--- 131 (176)
T PF13419_consen 60 -PEEIQELFREYNLESKLQPYPGVRELLERLKAKGIPLVIVSN---GSRERIERVLERLGLDDYFDE-IISSDDVGS--- 131 (176)
T ss_dssp -HHHHHHHHHHHHHHGGEEESTTHHHHHHHHHHTTSEEEEEES---SEHHHHHHHHHHTTHGGGCSE-EEEGGGSSS---
T ss_pred -HHHHHHHhhhhhhhhccchhhhhhhhhhhcccccceeEEeec---CCccccccccccccccccccc-ccccchhhh---
Confidence 222223333332224578999999999999999999999999 456888899999999999997 444443311
Q ss_pred hccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeC
Q 017067 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (378)
Q Consensus 246 ~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGD 325 (378)
.||+|++ |+.+++++|++|++|++|||
T Consensus 132 ---------------------------------------~Kp~~~~--------------~~~~~~~~~~~p~~~~~vgD 158 (176)
T PF13419_consen 132 ---------------------------------------RKPDPDA--------------YRRALEKLGIPPEEILFVGD 158 (176)
T ss_dssp ---------------------------------------STTSHHH--------------HHHHHHHHTSSGGGEEEEES
T ss_pred ---------------------------------------hhhHHHH--------------HHHHHHHcCCCcceEEEEeC
Confidence 2666555 99999999999999999999
Q ss_pred CHhHHHHHHHcCCCEEEE
Q 017067 326 SQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 326 s~~Di~aA~~aG~~~i~v 343 (378)
+..|+++|+++||++|+|
T Consensus 159 ~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 159 SPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp SHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHcCCeEEeC
Confidence 999999999999999986
|
... |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.9e-21 Score=172.92 Aligned_cols=183 Identities=11% Similarity=0.044 Sum_probs=121.3
Q ss_pred cEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCC------hHHHHHHHHHHcCCCCCCCchh
Q 017067 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD------EDRMLVLFFNRIGWPTSVPTNE 158 (378)
Q Consensus 85 kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~g~~~~l~~~~ 158 (378)
++|||||||||+|+... +..+++.+++++|.. ..+.+.+..+.+..... ...+...+...... .......
T Consensus 1 ~~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 76 (197)
T TIGR01548 1 QALVLDMDGVMADVSQS-YRRAIIDTVEHFGGV--SVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSE-RVRDAPT 76 (197)
T ss_pred CceEEecCceEEechHH-HHHHHHHHHHHHcCC--CCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccch-hccCCcc
Confidence 37999999999999997 899999999999854 25656666555422110 01122222111100 0000011
Q ss_pred hHHHHHHHHHHHHHHHHHHHh------c--CCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc
Q 017067 159 KKAFVKNVLQEKKNALDEFLA------S--KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (378)
Q Consensus 159 ~~~~i~~~~~~~~~~~~~~l~------~--~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f 230 (378)
.+.+.+.+.+.|..... . ....+.+++.++|+.|+++|++++|+||+ ....+..+++.+|+.++|
T Consensus 77 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~---~~~~~~~~l~~~gl~~~f 149 (197)
T TIGR01548 77 ----LEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGR---PRKDAAKFLTTHGLEILF 149 (197)
T ss_pred ----HHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCC---CHHHHHHHHHHcCchhhC
Confidence 12333333333332100 0 02346677799999999999999999994 468899999999999999
Q ss_pred hheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHH
Q 017067 231 KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGA 310 (378)
Q Consensus 231 ~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~ 310 (378)
+. +++.+++.. ||+|++ |..++
T Consensus 150 ~~-~~~~~~~~~-------------------------------------------KP~p~~--------------~~~~~ 171 (197)
T TIGR01548 150 PV-QIWMEDCPP-------------------------------------------KPNPEP--------------LILAA 171 (197)
T ss_pred CE-EEeecCCCC-------------------------------------------CcCHHH--------------HHHHH
Confidence 87 444433211 555554 89999
Q ss_pred HHcCCCCCcEEEEeCCHhHHHHHHHc
Q 017067 311 EYAEKPVRNCFLIAGSQSGVAGAQRI 336 (378)
Q Consensus 311 ~~lgv~p~~~i~VGDs~~Di~aA~~a 336 (378)
+++|++|++|++|||+.+|+++|+++
T Consensus 172 ~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 172 KALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999875
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.2e-21 Score=173.43 Aligned_cols=177 Identities=16% Similarity=0.114 Sum_probs=114.9
Q ss_pred EEEEecccccccccccchHHHHHHHHH-----HcCCCCCCCChhHHH-HHHhhccCChHHHHHHHHHHcCCCCCCCchhh
Q 017067 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQ-----KLGLDCANWTAPIYT-DLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEK 159 (378)
Q Consensus 86 aviFDlDGTLid~~~~~~~~a~~~~~~-----~~gl~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~ 159 (378)
+|+||+||||+|+... +..++++++. ++|++. .+..... .+.... |.... .+....+ .+.
T Consensus 2 ~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~~~g~~~--~~~~~l~~~~~~~~-g~~~~---~~~~~~~----~~~--- 67 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAG-IFLQIDRNITEFVAARLKLSE--EEARVLRKDYYREY-GTTLA---GLMILHE----IDA--- 67 (184)
T ss_pred eEEEeCCCCCCCCccc-HHHHHHHHHHHHHHHHcCcCH--HHHHHHHHHHHHHH-chHHH---HHHHhhC----CCH---
Confidence 7999999999999875 6677776654 556652 1111111 111111 11111 1111111 110
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhh
Q 017067 160 KAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 239 (378)
Q Consensus 160 ~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~ 239 (378)
+.+.+.+.+......++++||+.++|+.|+ ++++|+||+ ....+..+++.+|+..+|+. +++.++
T Consensus 68 --------~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~---~~~~~~~~l~~~gl~~~fd~-i~~~~~ 132 (184)
T TIGR01993 68 --------DEYLRYVHGRLPYEKLKPDPELRNLLLRLP---GRKIIFTNG---DRAHARRALNRLGIEDCFDG-IFCFDT 132 (184)
T ss_pred --------HHHHHHHhccCCHHhCCCCHHHHHHHHhCC---CCEEEEeCC---CHHHHHHHHHHcCcHhhhCe-EEEeec
Confidence 112222222111124678999999999997 589999995 46889999999999999987 444444
Q ss_pred HHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCc
Q 017067 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (378)
Q Consensus 240 ~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~ 319 (378)
..... .+.||+|++ |+.+++++|++|++
T Consensus 133 ~~~~~--------------------------------------~~~KP~p~~--------------~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 133 ANPDY--------------------------------------LLPKPSPQA--------------YEKALREAGVDPER 160 (184)
T ss_pred ccCcc--------------------------------------CCCCCCHHH--------------HHHHHHHhCCCccc
Confidence 32100 001666555 99999999999999
Q ss_pred EEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 320 CFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
|+||||+..|+++|+++||++|+|
T Consensus 161 ~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 161 AIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred eEEEeCCHHHHHHHHHcCCEEeeC
Confidence 999999999999999999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-21 Score=177.44 Aligned_cols=109 Identities=14% Similarity=0.121 Sum_probs=85.3
Q ss_pred CCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcch
Q 017067 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (378)
Q Consensus 181 ~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~ 260 (378)
...+++||+.++|+.|+++|++++|+||.... .......+..+++..+|+.. ++++++.
T Consensus 91 ~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~-~~~~~~~~~~~~l~~~fd~v-~~s~~~~------------------- 149 (211)
T TIGR02247 91 ENTKLRPSMMAAIKTLRAKGFKTACITNNFPT-DHSAEEALLPGDIMALFDAV-VESCLEG------------------- 149 (211)
T ss_pred cccccChhHHHHHHHHHHCCCeEEEEeCCCCc-cchhhhHhhhhhhHhhCCEE-EEeeecC-------------------
Confidence 35779999999999999999999999995421 11122334456788888874 3333221
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 261 ~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
.+||+|++ |..+++++|++|++|+||||+..|+.+|+++||++
T Consensus 150 -----------------------~~KP~p~~--------------~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 150 -----------------------LRKPDPRI--------------YQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred -----------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 12777777 99999999999999999999999999999999999
Q ss_pred EEEcCCC
Q 017067 341 VVMRSSL 347 (378)
Q Consensus 341 i~v~~~~ 347 (378)
|++.++.
T Consensus 193 i~v~~~~ 199 (211)
T TIGR02247 193 IKVSDEE 199 (211)
T ss_pred EEECCHH
Confidence 9998763
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.5e-21 Score=174.89 Aligned_cols=107 Identities=13% Similarity=0.158 Sum_probs=86.2
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH-hCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~-lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
+++||+.++|+.|+++|++++|+||+. .......+.. .++..+|+. +++++++..
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~---~~~~~~~~~~~~~l~~~fd~-v~~s~~~~~-------------------- 139 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTN---RLHTTFWPEEYPEVRAAADH-IYLSQDLGM-------------------- 139 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCc---hhhHHHHHhhchhHHHhcCE-EEEecccCC--------------------
Confidence 489999999999999999999999954 3444444443 477788877 444444321
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
+||+|++ |+.+++++|++|++|+||||+..|+++|+++||++|+
T Consensus 140 ----------------------~KP~p~~--------------~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~ 183 (199)
T PRK09456 140 ----------------------RKPEARI--------------YQHVLQAEGFSAADAVFFDDNADNIEAANALGITSIL 183 (199)
T ss_pred ----------------------CCCCHHH--------------HHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEE
Confidence 2777776 9999999999999999999999999999999999999
Q ss_pred EcCCCCCC
Q 017067 343 MRSSLTSR 350 (378)
Q Consensus 343 v~~~~~~~ 350 (378)
+.++.+..
T Consensus 184 ~~~~~~~~ 191 (199)
T PRK09456 184 VTDKQTIP 191 (199)
T ss_pred ecCCccHH
Confidence 98875543
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.85 E-value=1e-20 Score=168.54 Aligned_cols=100 Identities=24% Similarity=0.322 Sum_probs=82.7
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.+++||+.++|+.|+++|++++|+||+. ... ..+..++|+..+|+..+ ++++...
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~---~~~-~~~~~~~~l~~~f~~i~-~~~~~~~-------------------- 138 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSP---RDH-AVLVQELGLRDLFDVVI-FSGDVGR-------------------- 138 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCc---hHH-HHHHHhcCCHHHCCEEE-EcCCCCC--------------------
Confidence 6799999999999999999999999954 344 55556699999998743 3322211
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
.||+|++ |+.+++++|++|++|++|||+..|+++|+++||.+|+
T Consensus 139 ----------------------~KP~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~ 182 (183)
T TIGR01509 139 ----------------------GKPDPDI--------------YLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVL 182 (183)
T ss_pred ----------------------CCCCHHH--------------HHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEe
Confidence 2666666 9999999999999999999999999999999999997
Q ss_pred E
Q 017067 343 M 343 (378)
Q Consensus 343 v 343 (378)
|
T Consensus 183 v 183 (183)
T TIGR01509 183 V 183 (183)
T ss_pred C
Confidence 5
|
HAD subfamilies caused by an overly broad single model. |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.6e-21 Score=175.05 Aligned_cols=129 Identities=15% Similarity=0.141 Sum_probs=105.9
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
..+++|++.++|+.++.+ ++++|+|| +........++.+|+.++|+..+ .++++..
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTN---g~~~~~~~~l~~~gl~~~Fd~v~-~s~~~g~------------------- 152 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTN---GARPHQERKLRQLGLLDYFDAVF-ISEDVGV------------------- 152 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeC---CChHHHHHHHHHcCChhhhheEE-Eeccccc-------------------
Confidence 467999999999999999 99999999 45688999999999999999954 4433321
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 340 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~ 340 (378)
.||+|.| |+.+++++|++|++|+||||+. |||.+|+++||++
T Consensus 153 -----------------------~KP~~~~--------------f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~ 195 (229)
T COG1011 153 -----------------------AKPDPEI--------------FEYALEKLGVPPEEALFVGDSLENDILGARALGMKT 195 (229)
T ss_pred -----------------------CCCCcHH--------------HHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEE
Confidence 2777777 9999999999999999999997 5779999999999
Q ss_pred EEEcCCCCCC-CCCCCCcEEecCCCcchHHHH
Q 017067 341 VVMRSSLTSR-AEFPSANAVMDGFGGADLTIS 371 (378)
Q Consensus 341 i~v~~~~~~~-~~l~~ad~vi~~l~e~~~~~~ 371 (378)
|++..+.... .....++..+.++.++...+.
T Consensus 196 vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~ 227 (229)
T COG1011 196 VWINRGGKPLPDALEAPDYEISSLAELLDLLE 227 (229)
T ss_pred EEECCCCCCCCCCccCCceEEcCHHHHHHHHh
Confidence 9998775432 222457899999988865543
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.8e-20 Score=166.54 Aligned_cols=189 Identities=13% Similarity=0.159 Sum_probs=121.0
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHH
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i 163 (378)
+++|+|||||||+|+. .++.++++++|++. +.+...+ ++..... +...++.. .+ ..
T Consensus 2 ~k~viFDlDGTLiD~~-----~~~~~~~~~~g~~~-----~~~~~~~---g~~~~~~---~~~~~~~~----~~----~~ 57 (197)
T PHA02597 2 KPTILTDVDGVLLSWQ-----SGLPYFAQKYNIPT-----DHILKMI---QDERFRD---PGELFGCD----QE----LA 57 (197)
T ss_pred CcEEEEecCCceEchh-----hccHHHHHhcCCCH-----HHHHHHH---hHhhhcC---HHHHhccc----HH----HH
Confidence 6899999999999944 45678888888862 2222222 1111111 11222211 01 11
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchh---eeechhhH
Q 017067 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI---KIVGNEEV 240 (378)
Q Consensus 164 ~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~---~iv~~~~~ 240 (378)
..+.+.+.+ ... .....++||+.++|+.|+++ ++++++||.. .......++.+++..+|.. .+++.++.
T Consensus 58 ~~~~~~~~~---~~~-~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~---~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~ 129 (197)
T PHA02597 58 KKLIEKYNN---SDF-IRYLSAYDDALDVINKLKED-YDFVAVTALG---DSIDALLNRQFNLNALFPGAFSEVLMCGHD 129 (197)
T ss_pred HHHhhhhhH---HHH-HHhccCCCCHHHHHHHHHhc-CCEEEEeCCc---cchhHHHHhhCCHHHhCCCcccEEEEeccC
Confidence 222222221 111 22356999999999999997 5788889854 3444456677888765532 12222110
Q ss_pred HHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcE
Q 017067 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (378)
Q Consensus 241 ~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~ 320 (378)
||.|++ |..+++++| |++|
T Consensus 130 ---------------------------------------------~~kp~~--------------~~~a~~~~~--~~~~ 148 (197)
T PHA02597 130 ---------------------------------------------ESKEKL--------------FIKAKEKYG--DRVV 148 (197)
T ss_pred ---------------------------------------------cccHHH--------------HHHHHHHhC--CCcE
Confidence 333333 999999999 8999
Q ss_pred EEEeCCHhHHHHHHHc--CCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 321 FLIAGSQSGVAGAQRI--GMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 321 i~VGDs~~Di~aA~~a--G~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
+||||+.+|+++|+++ ||++|++.++.. ...+.+++.+.++.|+.
T Consensus 149 v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~--~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 149 CFVDDLAHNLDAAHEALSQLPVIHMLRGER--DHIPKLAHRVKSWNDIE 195 (197)
T ss_pred EEeCCCHHHHHHHHHHHcCCcEEEecchhh--ccccchhhhhccHHHHh
Confidence 9999999999999999 999999988854 44456678888887763
|
2 hypothetical protein; Provisional |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.83 E-value=5e-20 Score=169.87 Aligned_cols=200 Identities=15% Similarity=0.197 Sum_probs=122.9
Q ss_pred CCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhH
Q 017067 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~ 160 (378)
.+++++++|||||||++++. +..+++.+|.+. ....+.....++...+...+..++..-...+
T Consensus 11 ~~~~k~iiFD~DGTL~~~~~------~~~l~~~~g~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----- 73 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAET------IDEIAKIAGVEE------EVSEITERAMRGELDFKASLRERVALLKGLP----- 73 (219)
T ss_pred hccCCEEEEeCcccCCCchH------HHHHHHHhCCHH------HHHHHHHHHHcCCCCHHHHHHHHHHHhCCCC-----
Confidence 45678999999999999764 356666777641 1111211111111112112222221101110
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhH
Q 017067 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (378)
Q Consensus 161 ~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~ 240 (378)
.+.+.... ...+++||+.++|+.|+++|++++|+|| +....+..+++.+|+..+|...+...+.
T Consensus 74 ----------~~~~~~~~--~~~~~~~g~~~~l~~l~~~g~~~~IvS~---~~~~~~~~~l~~~~i~~~~~~~~~~~~~- 137 (219)
T TIGR00338 74 ----------VELLKEVR--ENLPLTEGAEELVKTLKEKGYKVAVISG---GFDLFAEHVKDKLGLDAAFANRLEVEDG- 137 (219)
T ss_pred ----------HHHHHHHH--hcCCcCCCHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCCceEeeEEEEECC-
Confidence 01122222 1256999999999999999999999999 5578889999999999887654332211
Q ss_pred HHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcE
Q 017067 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (378)
Q Consensus 241 ~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~ 320 (378)
.+...+.+... . +++.+++ |+.++++++++|++|
T Consensus 138 ---~~~~~~~~~~~--------------------------------------~--~~~k~~~---~~~~~~~~~~~~~~~ 171 (219)
T TIGR00338 138 ---KLTGLVEGPIV--------------------------------------D--ASYKGKT---LLILLRKEGISPENT 171 (219)
T ss_pred ---EEEEEecCccc--------------------------------------C--CcccHHH---HHHHHHHcCCCHHHE
Confidence 01111111000 0 1122333 899999999999999
Q ss_pred EEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCC-CCCcEEecCCC
Q 017067 321 FLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEF-PSANAVMDGFG 364 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l-~~ad~vi~~l~ 364 (378)
++|||+.+|+.+|+.+|+.+++-. ...+ +.|++++.+..
T Consensus 172 i~iGDs~~Di~aa~~ag~~i~~~~-----~~~~~~~a~~~i~~~~ 211 (219)
T TIGR00338 172 VAVGDGANDLSMIKAAGLGIAFNA-----KPKLQQKADICINKKD 211 (219)
T ss_pred EEEECCHHHHHHHHhCCCeEEeCC-----CHHHHHhchhccCCCC
Confidence 999999999999999999865422 1223 35789888543
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-19 Score=167.97 Aligned_cols=203 Identities=15% Similarity=0.194 Sum_probs=137.8
Q ss_pred CCCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHh--------------hccC--ChHHHHH-
Q 017067 80 NPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR--------------KSAG--DEDRMLV- 142 (378)
Q Consensus 80 ~~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~--------------~~~g--~~~~~~~- 142 (378)
..+++|+|+||++|||+.+... ....+.++.+.+|+++++ ........ ...| ....+..
T Consensus 3 ~~~~iravtfD~~~tLl~~~~~-~~~~y~~i~~~~gl~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~ 78 (237)
T KOG3085|consen 3 ELMRIRAVTFDAGGTLLATLPP-VMEVYCEIAEAYGLEYDD---SLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPK 78 (237)
T ss_pred cccceEEEEEeCCCceeecCCc-cHHHHHHHHHHhCCCCCH---HHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHH
Confidence 4578899999999999986654 568899999999998522 11111111 1111 1122222
Q ss_pred HHHHHcCCCCCCCchhhHHHHHHHHHHH-HHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHH
Q 017067 143 LFFNRIGWPTSVPTNEKKAFVKNVLQEK-KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVV 221 (378)
Q Consensus 143 ~~~~~~g~~~~l~~~~~~~~i~~~~~~~-~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l 221 (378)
.+...++....- . .+...+.+ ...|.... .....+.+++.++++.||++|..++++||.. ...+.++
T Consensus 79 lv~~~f~~~~~~--~-----~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d----~r~~~~l 146 (237)
T KOG3085|consen 79 LVESTFGKAGID--Y-----EEELLENFSFRLFSTFA-PSAWKYLDGMQELLQKLRKKGTILGIISNFD----DRLRLLL 146 (237)
T ss_pred HHHHHhccccch--h-----HHHHHhhhhhheecccc-ccCceeccHHHHHHHHHHhCCeEEEEecCCc----HHHHHHh
Confidence 222222221110 0 01111111 11111111 1256788999999999999999999999964 5666899
Q ss_pred HHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHH
Q 017067 222 EKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDK 301 (378)
Q Consensus 222 ~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~ 301 (378)
..+|+..+|++.++|.+.. ..||+|.|
T Consensus 147 ~~~~l~~~fD~vv~S~e~g-------------------------------------------~~KPDp~I---------- 173 (237)
T KOG3085|consen 147 LPLGLSAYFDFVVESCEVG-------------------------------------------LEKPDPRI---------- 173 (237)
T ss_pred hccCHHHhhhhhhhhhhhc-------------------------------------------cCCCChHH----------
Confidence 9999999999966555332 23888888
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCCC
Q 017067 302 IVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFPS 355 (378)
Q Consensus 302 ~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~ 355 (378)
|+.+++++|+.|++|++|||.. ||+++|+++||+++.|.+..+...+++.
T Consensus 174 ----f~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~~~ 224 (237)
T KOG3085|consen 174 ----FQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKELEY 224 (237)
T ss_pred ----HHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhhhh
Confidence 9999999999999999999986 7899999999999999988776655543
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.4e-19 Score=165.96 Aligned_cols=209 Identities=13% Similarity=0.139 Sum_probs=127.1
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
+.+|+|+|||||||++++.. ..+++.+|.+ ....+......+....+.+.+..+++.... .
T Consensus 10 ~~~k~viFDfDGTL~~~~~~------~~~~~~~g~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~------ 70 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDEGI------DELAEFCGAG------EAVAEWTAKAMGGSVPFEEALAARLSLFKP-S------ 70 (224)
T ss_pred ccCCEEEEeCCCcccchHHH------HHHHHHcCCh------HHHHHHHHHHHCCCCCHHHHHHHHHHHcCC-C------
Confidence 46889999999999998663 7788888875 222333322222233333333333332110 0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc--ccchheeechhh
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEE 239 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~--~~f~~~iv~~~~ 239 (378)
. + .+.+.+......++||+.++|+.|+++|++++|+|+ +....+..+++.+|+. .+|...+...++
T Consensus 71 -~----~----~~~~~~~~~~~~l~pg~~e~l~~l~~~g~~~~IvS~---~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~ 138 (224)
T PLN02954 71 -L----S----QVEEFLEKRPPRLSPGIPELVKKLRARGTDVYLVSG---GFRQMIAPVAAILGIPPENIFANQILFGDS 138 (224)
T ss_pred -H----H----HHHHHHHHccCCCCccHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHhCCChhhEEEeEEEEcCC
Confidence 0 1 111222122356899999999999999999999999 5578899999999997 355432222211
Q ss_pred HHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCc
Q 017067 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (378)
Q Consensus 240 ~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~ 319 (378)
. .+.|.... +|. +..+++++. ++.+++.+|. ++
T Consensus 139 g-------~~~g~~~~------------------------------~~~-----~~~~~K~~~---i~~~~~~~~~--~~ 171 (224)
T PLN02954 139 G-------EYAGFDEN------------------------------EPT-----SRSGGKAEA---VQHIKKKHGY--KT 171 (224)
T ss_pred C-------cEECccCC------------------------------Ccc-----cCCccHHHH---HHHHHHHcCC--Cc
Confidence 0 00000000 000 001122233 7888888885 69
Q ss_pred EEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCC-CCCCcEEecCCCcchH
Q 017067 320 CFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAE-FPSANAVMDGFGGADL 368 (378)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~-l~~ad~vi~~l~e~~~ 368 (378)
|++|||+.+|+.+|+++|+.+++...+...... ...++++++++.++..
T Consensus 172 ~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~ 221 (224)
T PLN02954 172 MVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIE 221 (224)
T ss_pred eEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHH
Confidence 999999999999999988887665443222222 2348999999988743
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.4e-19 Score=153.57 Aligned_cols=154 Identities=22% Similarity=0.339 Sum_probs=107.7
Q ss_pred EEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHHHH
Q 017067 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (378)
Q Consensus 86 aviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i~~ 165 (378)
+|+||+||||+|+... +..+|++++++++.+. +.+.... |........+.. .
T Consensus 1 ~iifD~DGTL~d~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~----g~~~~~~~~~~~------------------~ 52 (154)
T TIGR01549 1 AILFDIDGTLVDSSFA-IRRAFEETLEEFGEDF-----QALKALR----GLAEELLYRIAT------------------S 52 (154)
T ss_pred CeEecCCCcccccHHH-HHHHHHHHHHHhcccH-----HHHHHHH----ccChHHHHHHHH------------------H
Confidence 4899999999999875 7899999999988541 2222221 111111101000 0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhh
Q 017067 166 VLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245 (378)
Q Consensus 166 ~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~ 245 (378)
.++... | ......+||+.++|+.|+++|++++|+||+. ...+...++.+ +..+|+. +++.++..
T Consensus 53 -~~~~~~-~-----~~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~---~~~~~~~~~~~-l~~~f~~-i~~~~~~~---- 116 (154)
T TIGR01549 53 -FEELLG-Y-----DAEEAYIRGAADLLKRLKEAGIKLGIISNGS---LRAQKLLLRKH-LGDYFDL-ILGSDEFG---- 116 (154)
T ss_pred -HHHHhC-c-----chhheeccCHHHHHHHHHHCcCeEEEEeCCc---hHHHHHHHHHH-HHhcCcE-EEecCCCC----
Confidence 111111 1 1234578999999999999999999999954 57788888887 7777776 33333221
Q ss_pred hccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeC
Q 017067 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (378)
Q Consensus 246 ~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGD 325 (378)
.||+|++ |..+++++|++| +|++|||
T Consensus 117 ---------------------------------------~Kp~~~~--------------~~~~~~~~~~~~-~~l~iGD 142 (154)
T TIGR01549 117 ---------------------------------------AKPEPEI--------------FLAALESLGLPP-EVLHVGD 142 (154)
T ss_pred ---------------------------------------CCcCHHH--------------HHHHHHHcCCCC-CEEEEeC
Confidence 1666555 999999999999 9999999
Q ss_pred CHhHHHHHHHcC
Q 017067 326 SQSGVAGAQRIG 337 (378)
Q Consensus 326 s~~Di~aA~~aG 337 (378)
+..|+++|+++|
T Consensus 143 s~~Di~aa~~aG 154 (154)
T TIGR01549 143 NLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHcc
Confidence 999999999997
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.8e-20 Score=162.70 Aligned_cols=167 Identities=17% Similarity=0.188 Sum_probs=110.6
Q ss_pred EEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhH-HHHHHhhccCChH---H----HHHHHHHHcCCCCCCCch
Q 017067 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI-YTDLLRKSAGDED---R----MLVLFFNRIGWPTSVPTN 157 (378)
Q Consensus 86 aviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~-~~~~~~~~~g~~~---~----~~~~~~~~~g~~~~l~~~ 157 (378)
+|+||+||||+|++.. +..+++.++.+.+.....|+... .........+... . ....+..++|.+.. .
T Consensus 1 ~viFD~DGTL~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~ 76 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGG-VRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAE---P 76 (175)
T ss_pred CeEEecCCcCcccHHH-HHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCC---H
Confidence 5899999999999986 77888877776443100022111 1111211111111 1 33445555665421 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
... +.+.+.+ ..++++||+.++|+ +++|+||+ .......+++++|+..+|+. +++.
T Consensus 77 -------~~~----~~~~~~~--~~~~~~~g~~~~L~-------~~~i~Tn~---~~~~~~~~l~~~~l~~~fd~-v~~~ 132 (175)
T TIGR01493 77 -------KYG----ERLRDAY--KNLPPWPDSAAALA-------RVAILSNA---SHWAFDQFAQQAGLPWYFDR-AFSV 132 (175)
T ss_pred -------HHH----HHHHHHH--hcCCCCCchHHHHH-------HHhhhhCC---CHHHHHHHHHHCCCHHHHhh-hccH
Confidence 111 1222222 13569999999998 38899995 46888889999999999987 5566
Q ss_pred hhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCC
Q 017067 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (378)
Q Consensus 238 ~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p 317 (378)
+++.. .||+|++ |+.+++++|++|
T Consensus 133 ~~~~~------------------------------------------~KP~p~~--------------f~~~~~~~~~~p 156 (175)
T TIGR01493 133 DTVRA------------------------------------------YKPDPVV--------------YELVFDTVGLPP 156 (175)
T ss_pred hhcCC------------------------------------------CCCCHHH--------------HHHHHHHHCCCH
Confidence 55422 2777776 999999999999
Q ss_pred CcEEEEeCCHhHHHHHHHc
Q 017067 318 RNCFLIAGSQSGVAGAQRI 336 (378)
Q Consensus 318 ~~~i~VGDs~~Di~aA~~a 336 (378)
++|+||||+.+||.+|+++
T Consensus 157 ~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 157 DRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHeEeEecChhhHHHHhcC
Confidence 9999999999999999864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-18 Score=170.12 Aligned_cols=199 Identities=13% Similarity=0.113 Sum_probs=125.8
Q ss_pred CCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhH
Q 017067 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~ 160 (378)
...+++|+|||||||+..+ .+.++++..|.. ............++..+.+.+..++......+
T Consensus 107 ~~~~~LvvfDmDGTLI~~e------~i~eia~~~g~~------~~v~~it~~~m~Geldf~esl~~rv~~l~g~~----- 169 (322)
T PRK11133 107 LRTPGLLVMDMDSTAIQIE------CIDEIAKLAGTG------EEVAEVTERAMRGELDFEASLRQRVATLKGAD----- 169 (322)
T ss_pred ccCCCEEEEECCCCCcchH------HHHHHHHHhCCc------hHHHHHHHHHHcCCcCHHHHHHHHHHHhCCCC-----
Confidence 3568999999999999544 447777777775 22222222222233333333333332111111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhH
Q 017067 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (378)
Q Consensus 161 ~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~ 240 (378)
+.+ +.... ..++++||+.++|+.|+++|++++|+|+ +...+.+.+.+.+|+...+...+..
T Consensus 170 ---~~i-------l~~v~--~~l~l~pGa~elL~~Lk~~G~~~aIvSg---g~~~~~~~l~~~Lgld~~~an~lei---- 230 (322)
T PRK11133 170 ---ANI-------LQQVR--ENLPLMPGLTELVLKLQALGWKVAIASG---GFTYFADYLRDKLRLDAAVANELEI---- 230 (322)
T ss_pred ---HHH-------HHHHH--HhCCCChhHHHHHHHHHHcCCEEEEEEC---CcchhHHHHHHHcCCCeEEEeEEEE----
Confidence 011 11111 2367999999999999999999999999 5567888999999997755422111
Q ss_pred HHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcE
Q 017067 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (378)
Q Consensus 241 ~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~ 320 (378)
..+.+...+.|+.+. .+++++. ++.+++++|+++++|
T Consensus 231 ~dg~ltg~v~g~iv~----------------------------------------~k~K~~~---L~~la~~lgi~~~qt 267 (322)
T PRK11133 231 MDGKLTGNVLGDIVD----------------------------------------AQYKADT---LTRLAQEYEIPLAQT 267 (322)
T ss_pred ECCEEEeEecCccCC----------------------------------------cccHHHH---HHHHHHHcCCChhhE
Confidence 111222222222111 1122223 899999999999999
Q ss_pred EEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecC
Q 017067 321 FLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDG 362 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~ 362 (378)
++|||+.||+.|++.||+.+++.+.+ .-...||+++++
T Consensus 268 IaVGDg~NDl~m~~~AGlgiA~nAkp----~Vk~~Ad~~i~~ 305 (322)
T PRK11133 268 VAIGDGANDLPMIKAAGLGIAYHAKP----KVNEQAQVTIRH 305 (322)
T ss_pred EEEECCHHHHHHHHHCCCeEEeCCCH----HHHhhCCEEecC
Confidence 99999999999999999988873333 223358999973
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.9e-18 Score=153.29 Aligned_cols=114 Identities=12% Similarity=0.098 Sum_probs=87.3
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
++++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|...+.+.+.. .
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~---~~~~~~~~~l~~~g~~~~~~~~~~~~~~g---~------------------ 134 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSG---GIMCLAKKVAEKLNPDYVYSNELVFDEKG---F------------------ 134 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHhCCCeEEEEEEEEcCCC---e------------------
Confidence 56999999999999999999999999 55789999999999988776544333210 0
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhcccccc-CCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDI-DTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i-~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
.||++.. ..|.+ ..++ +..+++++|+++++|++|||+.+|+.+|+.+|++++
T Consensus 135 ----------------------~~p~~~~~~~~~~--k~~~---~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a 187 (201)
T TIGR01491 135 ----------------------IQPDGIVRVTFDN--KGEA---VERLKRELNPSLTETVAVGDSKNDLPMFEVADISIS 187 (201)
T ss_pred ----------------------EecceeeEEcccc--HHHH---HHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEE
Confidence 0333221 11222 2233 788889999999999999999999999999999888
Q ss_pred EEcCCC
Q 017067 342 VMRSSL 347 (378)
Q Consensus 342 ~v~~~~ 347 (378)
+.+++.
T Consensus 188 ~~~~~~ 193 (201)
T TIGR01491 188 LGDEGH 193 (201)
T ss_pred ECCCcc
Confidence 876653
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.9e-17 Score=152.56 Aligned_cols=209 Identities=13% Similarity=0.074 Sum_probs=126.8
Q ss_pred ccEEEEecccccccccccchHHHHHHHHH---HcCCCCCCCChhHHHHHHhhccC-ChHHHHHHHHHHcCCCCCCCchhh
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQ---KLGLDCANWTAPIYTDLLRKSAG-DEDRMLVLFFNRIGWPTSVPTNEK 159 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~---~~gl~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~g~~~~l~~~~~ 159 (378)
+++|+||+.||+.+.... +...|-.+.+ ++-- .+|..+...++....+. ..+.+.+.+...+......+
T Consensus 1 ~~~~l~diegt~~~isfv-~~~lfpy~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~k~~---- 73 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFV-HDVLFPYAASRLESFVN--DNYESTIVENLRELGKTPEELILLRKLHAEMDKDRKAT---- 73 (220)
T ss_pred CCEEEEecCCCcccHHHH-HhhhhHHHHHHHHHHHH--HhCCCHHHHHHHHhccCCcHHHHHHHHHHHHHcCCCcc----
Confidence 478999999999997654 3333322222 2111 13444444443322111 01333333333332222211
Q ss_pred HHHHHHHHHH-HHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHh---Cccccchheee
Q 017067 160 KAFVKNVLQE-KKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---GSERISKIKIV 235 (378)
Q Consensus 160 ~~~i~~~~~~-~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~l---gi~~~f~~~iv 235 (378)
-.+.++.. +.+.|.+. ....+++||+.++|++|+++|++++|+||.+ ....+.+++.. ++..+|+..+
T Consensus 74 --~lk~lqg~iw~~~Y~~~--~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s---~~~~~~~~~~~~~~~L~~~f~~~f- 145 (220)
T TIGR01691 74 --PLKTLQGLIWRQGYESG--ELTSHLYPDVPPALEAWLQLGLRLAVYSSGS---VPAQKLLFGHSDAGNLTPYFSGYF- 145 (220)
T ss_pred --hHHHHHHHHHHHHHhcC--CcccCcCcCHHHHHHHHHHCCCEEEEEeCCC---HHHHHHHHhhccccchhhhcceEE-
Confidence 12333333 33444331 2246799999999999999999999999954 46666666665 5556665421
Q ss_pred chhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCC
Q 017067 236 GNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK 315 (378)
Q Consensus 236 ~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv 315 (378)
.. .. +.||+|++ |..+++++|+
T Consensus 146 d~-~~-------------------------------------------g~KP~p~~--------------y~~i~~~lgv 167 (220)
T TIGR01691 146 DT-TV-------------------------------------------GLKTEAQS--------------YVKIAGQLGS 167 (220)
T ss_pred Ee-Cc-------------------------------------------ccCCCHHH--------------HHHHHHHhCc
Confidence 10 00 12666666 9999999999
Q ss_pred CCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC-CC-cEEecCCCc
Q 017067 316 PVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP-SA-NAVMDGFGG 365 (378)
Q Consensus 316 ~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~-~a-d~vi~~l~e 365 (378)
+|++|+||||+..|+++|+++||++|++.++......-. .. .-++.+|.+
T Consensus 168 ~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~~~~~~~~~~~~~~~~~~~~ 219 (220)
T TIGR01691 168 PPREILFLSDIINELDAARKAGLHTGQLVRPGNDPVVDPSFPVYPQFPDLNA 219 (220)
T ss_pred ChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCCCCCCcccCCCCCeecCccc
Confidence 999999999999999999999999999876643311111 11 456777665
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.8e-17 Score=151.40 Aligned_cols=143 Identities=15% Similarity=0.131 Sum_probs=92.3
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
..+++||+.++|+.|+++|++++|+|| +....+..+++.+ +.. +. +++++. ...++.+.
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~---~~~~~i~~il~~~-~~~--~~-i~~n~~--------~~~~~~~~------ 130 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSG---GMDFFVYPLLQGL-IPK--EQ-IYCNGS--------DFSGEYIT------ 130 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECC---CcHHHHHHHHHHh-CCc--Cc-EEEeEE--------EecCCeeE------
Confidence 367999999999999999999999999 4568899999987 643 11 222110 01111111
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCC-CCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDT-SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~k-p~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
..||+|.... ....... ...+++.++.++++|++|||+.+|+.+|++||+.+
T Consensus 131 ----------------------~~kp~p~~~~~~~~~~~~-----K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~ 183 (219)
T PRK09552 131 ----------------------ITWPHPCDEHCQNHCGCC-----KPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVF 183 (219)
T ss_pred ----------------------EeccCCccccccccCCCc-----hHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcce
Confidence 1255554310 0000000 23568889999999999999999999999999843
Q ss_pred EEEcCCCCC-CCCCCCCcEEecCCCcchHHHHHHh
Q 017067 341 VVMRSSLTS-RAEFPSANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 341 i~v~~~~~~-~~~l~~ad~vi~~l~e~~~~~~~l~ 374 (378)
+ .+.... ..+...+.+.++++.|+...+..+.
T Consensus 184 a--~~~l~~~~~~~~~~~~~~~~f~ei~~~l~~~~ 216 (219)
T PRK09552 184 A--RDFLITKCEELGIPYTPFETFHDVQTELKHLL 216 (219)
T ss_pred e--HHHHHHHHHHcCCCccccCCHHHHHHHHHHHh
Confidence 3 221111 1233447788899999876665543
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.6e-17 Score=142.51 Aligned_cols=107 Identities=14% Similarity=0.187 Sum_probs=80.0
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCc------------hHHHHHHHHHhCccccchhe-eec-hhhHHHhhhhccc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSG------------DRIARSVVEKLGSERISKIK-IVG-NEEVERSLYGQFV 249 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~------------~~~~~~~l~~lgi~~~f~~~-iv~-~~~~~~~~~~~~v 249 (378)
.++||+.++|+.|+++|++++|+||..+.. ...+...++.+|+...+.+. ..+ .+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~--------- 97 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNC--------- 97 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCC---------
Confidence 378999999999999999999999964200 13456677888886322110 000 0000
Q ss_pred cccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhH
Q 017067 250 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 329 (378)
Q Consensus 250 ~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~D 329 (378)
..+||+|++ |+.+++++|++|++|+||||+..|
T Consensus 98 ---------------------------------~~~KP~~~~--------------~~~~~~~~~~~~~e~i~IGDs~~D 130 (147)
T TIGR01656 98 ---------------------------------SCRKPKPGL--------------ILEALKRLGVDASRSLVVGDRLRD 130 (147)
T ss_pred ---------------------------------CCCCCCHHH--------------HHHHHHHcCCChHHEEEEcCCHHH
Confidence 012666665 999999999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCC
Q 017067 330 VAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 330 i~aA~~aG~~~i~v~~~ 346 (378)
+++|+++||++|++.++
T Consensus 131 i~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 131 LQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHCCCCEEEecCC
Confidence 99999999999999864
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.3e-16 Score=140.95 Aligned_cols=132 Identities=12% Similarity=0.110 Sum_probs=89.4
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
++++||+.++|+.|+++ ++++|+|| +....++.+++.+|+..+|...+...++. ++.|..
T Consensus 67 ~~~~pg~~e~L~~L~~~-~~~~IvS~---~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------~i~~~~--------- 126 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER-FQVVILSD---TFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------MITGYD--------- 126 (205)
T ss_pred CCCCCCHHHHHHHHHhc-CCEEEEeC---CcHHHHHHHHHHcCCchhhcceEEECCCC-------eEECcc---------
Confidence 56899999999999999 99999999 55789999999999988876533222110 000000
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
+ +.|.+ ...+++.++..+++|++|||+.+|+.+++++|+.+.+
T Consensus 127 -----------------------~-------~~p~~-------k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~ 169 (205)
T PRK13582 127 -----------------------L-------RQPDG-------KRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILF 169 (205)
T ss_pred -----------------------c-------cccch-------HHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEE
Confidence 0 11222 2333556666779999999999999999999986643
Q ss_pred EcCCCCCCCCCCCCcE-EecCCCcchHHHHHHh
Q 017067 343 MRSSLTSRAEFPSANA-VMDGFGGADLTISKLR 374 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~-vi~~l~e~~~~~~~l~ 374 (378)
.... ...-..++. +++++.++-..+.+..
T Consensus 170 -~~~~--~~~~~~~~~~~~~~~~el~~~l~~~~ 199 (205)
T PRK13582 170 -RPPA--NVIAEFPQFPAVHTYDELLAAIDKAS 199 (205)
T ss_pred -CCCH--HHHHhCCcccccCCHHHHHHHHHHHH
Confidence 2221 111123444 8999999876666544
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.9e-16 Score=141.85 Aligned_cols=128 Identities=15% Similarity=0.150 Sum_probs=93.9
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCC-----chHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKS-----GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~-----~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~ 258 (378)
.++|||.++|+.|+++|++++|+||+..- ........++.+|+..+|......++++.
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~----------------- 90 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCE----------------- 90 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCC-----------------
Confidence 48999999999999999999999996410 00123344667777665432111111110
Q ss_pred chhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCC
Q 017067 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (378)
Q Consensus 259 ~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 338 (378)
.+||+|++ |+.++++++++|++|+||||+.+|+++|+++||
T Consensus 91 -------------------------~~KP~p~~--------------~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi 131 (173)
T PRK06769 91 -------------------------CRKPSTGM--------------LLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNA 131 (173)
T ss_pred -------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCC
Confidence 13777777 999999999999999999999999999999999
Q ss_pred CEEEEcCCCCCC------CCCC--CCcEEecCCCcch
Q 017067 339 PCVVMRSSLTSR------AEFP--SANAVMDGFGGAD 367 (378)
Q Consensus 339 ~~i~v~~~~~~~------~~l~--~ad~vi~~l~e~~ 367 (378)
.+|++.++.... +++. .++++++++.|+.
T Consensus 132 ~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~ 168 (173)
T PRK06769 132 TTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAV 168 (173)
T ss_pred eEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHH
Confidence 999999876432 2332 4789999988874
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.9e-16 Score=139.29 Aligned_cols=136 Identities=11% Similarity=0.081 Sum_probs=92.9
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCC----c--------hHHHHHHHHHhCccccchheeechhhHHHhhhhcccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS----G--------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 250 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~----~--------~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~ 250 (378)
+.++||+.++|+.|+++|++++|+||+... . ......++..+++. |+..+.+.. .. .
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~-~~--------~ 93 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPH-HP--------E 93 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCC-CC--------c
Confidence 348999999999999999999999996520 0 01222344444444 222111110 00 0
Q ss_pred c-cccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhH
Q 017067 251 G-KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 329 (378)
Q Consensus 251 g-~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~D 329 (378)
+ ..+. +-+.++||+|++ |..+++++|++|++|+||||+.+|
T Consensus 94 ~~~~~~------------------------~~~~~~KP~p~~--------------~~~a~~~~~~~~~~~v~VGDs~~D 135 (176)
T TIGR00213 94 GVEEFR------------------------QVCDCRKPKPGM--------------LLQARKELHIDMAQSYMVGDKLED 135 (176)
T ss_pred cccccc------------------------CCCCCCCCCHHH--------------HHHHHHHcCcChhhEEEEcCCHHH
Confidence 0 0000 001134777777 999999999999999999999999
Q ss_pred HHHHHHcCCCE-EEEcCCCCCCCCC-CCCcEEecCCCcch
Q 017067 330 VAGAQRIGMPC-VVMRSSLTSRAEF-PSANAVMDGFGGAD 367 (378)
Q Consensus 330 i~aA~~aG~~~-i~v~~~~~~~~~l-~~ad~vi~~l~e~~ 367 (378)
|++|+++|+++ +++.++....... ..||++++++.++.
T Consensus 136 i~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 136 MQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred HHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 99999999998 7998886544444 34899999998873
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.2e-16 Score=131.72 Aligned_cols=99 Identities=15% Similarity=0.196 Sum_probs=78.8
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCc-----hHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSG-----DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~-----~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~ 259 (378)
++||+.++|+.|+++|++++|+||..... ...++.+++.+++...+. +++. .
T Consensus 26 ~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~--~~~~---~------------------ 82 (132)
T TIGR01662 26 LYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVL--YACP---H------------------ 82 (132)
T ss_pred eCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEE--EECC---C------------------
Confidence 78999999999999999999999943000 456778889998863332 1111 0
Q ss_pred hhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHc-CCCCCcEEEEeC-CHhHHHHHHHcC
Q 017067 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA-EKPVRNCFLIAG-SQSGVAGAQRIG 337 (378)
Q Consensus 260 ~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~l-gv~p~~~i~VGD-s~~Di~aA~~aG 337 (378)
..||+|++ |+.+++++ +++|++|+|||| +.+|+.+|+++|
T Consensus 83 ------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~G 124 (132)
T TIGR01662 83 ------------------------CRKPKPGM--------------FLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAG 124 (132)
T ss_pred ------------------------CCCCChHH--------------HHHHHHHcCCCChhheEEEcCCCcccHHHHHHCC
Confidence 12666665 99999999 599999999999 799999999999
Q ss_pred CCEEEEc
Q 017067 338 MPCVVMR 344 (378)
Q Consensus 338 ~~~i~v~ 344 (378)
+++|+++
T Consensus 125 i~~i~~~ 131 (132)
T TIGR01662 125 LAFILVA 131 (132)
T ss_pred CeEEEee
Confidence 9999986
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-16 Score=142.70 Aligned_cols=107 Identities=11% Similarity=0.093 Sum_probs=85.4
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc---------ccchheeechhhHHHhhhhcccccc
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE---------RISKIKIVGNEEVERSLYGQFVLGK 252 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~---------~~f~~~iv~~~~~~~~~~~~~v~g~ 252 (378)
...++||+.++|+.|+++|++++|+||+. ....++.+++.+++. ++|+.. ++.++..
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~--~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~i-v~~~~~~----------- 108 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWND--VPEWAYEILGTFEITYAGKTVPMHSLFDDR-IEIYKPN----------- 108 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCC--ChHHHHHHHHhCCcCCCCCcccHHHhceee-eeccCCc-----------
Confidence 46799999999999999999999999951 467888999999998 888774 3332210
Q ss_pred ccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHc--CCCCCcEEEEeCCHhHH
Q 017067 253 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA--EKPVRNCFLIAGSQSGV 330 (378)
Q Consensus 253 ~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~l--gv~p~~~i~VGDs~~Di 330 (378)
.+++.+.+ ++.+.+.+ |++|++|+||||+..|+
T Consensus 109 ------------------------------------------~~kp~~~i---~~~~~~~~~~gl~p~e~l~VgDs~~di 143 (174)
T TIGR01685 109 ------------------------------------------KAKQLEMI---LQKVNKVDPSVLKPAQILFFDDRTDNV 143 (174)
T ss_pred ------------------------------------------hHHHHHHH---HHHhhhcccCCCCHHHeEEEcChhHhH
Confidence 02233333 66666777 89999999999999999
Q ss_pred HHHHHcCCCEEEEcCCC
Q 017067 331 AGAQRIGMPCVVMRSSL 347 (378)
Q Consensus 331 ~aA~~aG~~~i~v~~~~ 347 (378)
++|+++|+.++++.++.
T Consensus 144 ~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 144 REVWGYGVTSCYCPSGM 160 (174)
T ss_pred HHHHHhCCEEEEcCCCc
Confidence 99999999999998874
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-15 Score=136.86 Aligned_cols=134 Identities=14% Similarity=0.069 Sum_probs=94.6
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCC----c--------hHHHHHHHHHhCccccchheeechhhHHHhhhhccccc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKS----G--------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 251 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~----~--------~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g 251 (378)
.++||+.++|+.|+++|++++|+||.+.. . ......+++.+|+ .|+..+.+.... .
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~----------~ 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHP----------E 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCC----------C
Confidence 48999999999999999999999996410 0 1223344556665 243322211000 0
Q ss_pred cccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHH
Q 017067 252 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 331 (378)
Q Consensus 252 ~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~ 331 (378)
+.+. .+||+|++ |..+++++|++|++|+||||+.+|+.
T Consensus 97 ~~~~----------------------------~~KP~p~~--------------~~~~~~~l~~~~~~~~~VgDs~~Di~ 134 (181)
T PRK08942 97 DGCD----------------------------CRKPKPGM--------------LLSIAERLNIDLAGSPMVGDSLRDLQ 134 (181)
T ss_pred CCCc----------------------------CCCCCHHH--------------HHHHHHHcCCChhhEEEEeCCHHHHH
Confidence 0000 12777666 99999999999999999999999999
Q ss_pred HHHHcCCCEEEEcCCCCCCCCC-CCC--cEEecCCCcchHHHH
Q 017067 332 GAQRIGMPCVVMRSSLTSRAEF-PSA--NAVMDGFGGADLTIS 371 (378)
Q Consensus 332 aA~~aG~~~i~v~~~~~~~~~l-~~a--d~vi~~l~e~~~~~~ 371 (378)
+|+++||++|++.++....... ..+ +++++++.++...+.
T Consensus 135 ~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 135 AAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred HHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 9999999999998876543322 235 899999998865443
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.7e-15 Score=138.08 Aligned_cols=109 Identities=9% Similarity=0.169 Sum_probs=79.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCC-chHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~-~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
..+.+++.++|+.++++|++++++||...+ .+..++.+++.+|+..+|+. +++.+....
T Consensus 113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~-i~~~d~~~~------------------- 172 (237)
T TIGR01672 113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPV-IFAGDKPGQ------------------- 172 (237)
T ss_pred CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeE-EECCCCCCC-------------------
Confidence 347777999999999999999999996321 45678888999999998875 444432210
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
.||+ + . .+++.+|+ ++||||+.+|+.+|+++|+++|
T Consensus 173 -----------------------~Kp~---------~-------~-~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I 208 (237)
T TIGR01672 173 -----------------------YQYT---------K-------T-QWIQDKNI----RIHYGDSDNDITAAKEAGARGI 208 (237)
T ss_pred -----------------------CCCC---------H-------H-HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEE
Confidence 0221 1 2 23566776 8999999999999999999999
Q ss_pred EEcCCCCCC-CCCCC
Q 017067 342 VMRSSLTSR-AEFPS 355 (378)
Q Consensus 342 ~v~~~~~~~-~~l~~ 355 (378)
.+.++..+. ..++.
T Consensus 209 ~V~~g~~s~~~~~~~ 223 (237)
T TIGR01672 209 RILRASNSTYKPLPQ 223 (237)
T ss_pred EEEecCCCCCCCccc
Confidence 998776543 34444
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.3e-15 Score=136.28 Aligned_cols=132 Identities=15% Similarity=0.160 Sum_probs=98.9
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
.++|.+..+++|-.|++++ ..+.|| ++...+.++++++|++++|+.+++....-.. +
T Consensus 98 ~LkPD~~LRnlLL~l~~r~--k~~FTN---a~k~HA~r~Lk~LGieDcFegii~~e~~np~---------~--------- 154 (244)
T KOG3109|consen 98 DLKPDPVLRNLLLSLKKRR--KWIFTN---AYKVHAIRILKKLGIEDCFEGIICFETLNPI---------E--------- 154 (244)
T ss_pred hcCCCHHHHHHHHhCcccc--EEEecC---CcHHHHHHHHHHhChHHhccceeEeeccCCC---------C---------
Confidence 4778899999999999875 889999 5569999999999999999986543311100 0
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCC-CCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~-p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
.+-+-||+++ ||+.+.+..|+. |.+++||+||.++|++|++.||++
T Consensus 155 --------------------------~~~vcKP~~~-------afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~t 201 (244)
T KOG3109|consen 155 --------------------------KTVVCKPSEE-------AFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKT 201 (244)
T ss_pred --------------------------CceeecCCHH-------HHHHHHHHhCCCCcCceEEEcCchhhHHHHHhcccee
Confidence 1112233333 299999999998 999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCcEEecCCCcchHHHHHH
Q 017067 341 VVMRSSLTSRAEFPSANAVMDGFGGADLTISKL 373 (378)
Q Consensus 341 i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l 373 (378)
+++...... ..+|+++.+.......++.|
T Consensus 202 vlv~~~~~~----~~~d~~l~~ih~~k~a~p~l 230 (244)
T KOG3109|consen 202 VLVGREHKI----KGVDYALEQIHNNKEALPEL 230 (244)
T ss_pred EEEEeeecc----cchHHHHHHhhchhhhchHH
Confidence 999866333 34677777666665444443
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.9e-14 Score=133.04 Aligned_cols=187 Identities=17% Similarity=0.221 Sum_probs=127.0
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
+..++++|||||||++.+ .+..+....|.. ..+.......+.....+...+..+..+-..++.+.
T Consensus 3 ~~~~L~vFD~D~TLi~~~------~~~~~~~~~g~~------~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~--- 67 (212)
T COG0560 3 RMKKLAVFDLDGTLINAE------LIDELARGAGVG------EEVLAITERAMRGELDFEESLRLRVALLKGLPVEV--- 67 (212)
T ss_pred CccceEEEecccchhhHH------HHHHHHHHhCCH------HHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHH---
Confidence 356799999999999933 345566666665 44444443333334444444444443333332111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
++.+.+ + ..++.||+.++++.++++|++++|+|+ ++...++.+.+.+|++..+...+...+
T Consensus 68 -v~~~~~-------~-----~~~l~~ga~elv~~lk~~G~~v~iiSg---g~~~lv~~ia~~lg~d~~~an~l~~~d--- 128 (212)
T COG0560 68 -LEEVRE-------E-----FLRLTPGAEELVAALKAAGAKVVIISG---GFTFLVEPIAERLGIDYVVANELEIDD--- 128 (212)
T ss_pred -HHHHHH-------h-----cCcCCccHHHHHHHHHHCCCEEEEEcC---ChHHHHHHHHHHhCCchheeeEEEEeC---
Confidence 111111 1 156999999999999999999999999 778999999999999998877543332
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
+.|++-+.|..+... .| ..+++..++.+|+++++++
T Consensus 129 -G~ltG~v~g~~~~~~---------~K----------------------------------~~~l~~~~~~~g~~~~~~~ 164 (212)
T COG0560 129 -GKLTGRVVGPICDGE---------GK----------------------------------AKALRELAAELGIPLEETV 164 (212)
T ss_pred -CEEeceeeeeecCcc---------hH----------------------------------HHHHHHHHHHcCCCHHHeE
Confidence 134444443332211 01 1237888999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCC
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (378)
++|||.||+.|.+.+|.+.++-+.+
T Consensus 165 a~gDs~nDlpml~~ag~~ia~n~~~ 189 (212)
T COG0560 165 AYGDSANDLPMLEAAGLPIAVNPKP 189 (212)
T ss_pred EEcCchhhHHHHHhCCCCeEeCcCH
Confidence 9999999999999999999987766
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.5e-15 Score=131.60 Aligned_cols=99 Identities=13% Similarity=0.195 Sum_probs=76.4
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCc---------hHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSG---------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 255 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~---------~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~ 255 (378)
++||+.++|+.|+++|++++|+||..... ...+..+++.+|+.. .. +++.++..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~-ii~~~~~~-------------- 105 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QV-LAATHAGL-------------- 105 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EE-EEecCCCC--------------
Confidence 68999999999999999999999964210 024577889999854 22 22222110
Q ss_pred cCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcC--CCCCcEEEEeCCH------
Q 017067 256 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQ------ 327 (378)
Q Consensus 256 ~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lg--v~p~~~i~VGDs~------ 327 (378)
.+||+|++ |+.+++++| ++|++|+||||+.
T Consensus 106 ----------------------------~~KP~p~~--------------~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~ 143 (166)
T TIGR01664 106 ----------------------------YRKPMTGM--------------WEYLQSQYNSPIKMTRSFYVGDAAGRKLDF 143 (166)
T ss_pred ----------------------------CCCCccHH--------------HHHHHHHcCCCCCchhcEEEECCCCCCCCC
Confidence 12777666 999999999 9999999999986
Q ss_pred --hHHHHHHHcCCCEEE
Q 017067 328 --SGVAGAQRIGMPCVV 342 (378)
Q Consensus 328 --~Di~aA~~aG~~~i~ 342 (378)
+|+++|+++|+++++
T Consensus 144 ~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 144 SDADIKFAKNLGLEFKY 160 (166)
T ss_pred chhHHHHHHHCCCCcCC
Confidence 699999999999875
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.7e-15 Score=135.94 Aligned_cols=140 Identities=18% Similarity=0.145 Sum_probs=86.4
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
..+++||+.++|+.|+++|++++|+|+ +....+..+++.++....+ ++++-. ..++.+.
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~---~~~~~i~~il~~~~~~~~i----~~n~~~--------~~~~~~~------ 126 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISG---GMDFFVYPLLEGIVEKDRI----YCNEAD--------FSNEYIH------ 126 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECC---CcHHHHHHHHHhhCCcccE----EeceeE--------eeCCeeE------
Confidence 367999999999999999999999999 4568888899887543322 221100 0111110
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCC-CcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp-~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
..||.|..... ...... -..++++++..+++|+||||+.+|+.+|+.||+
T Consensus 127 ----------------------~~~p~~~~~~~~~~cg~~-----K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~-- 177 (214)
T TIGR03333 127 ----------------------IDWPHPCDGTCQNQCGCC-----KPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL-- 177 (214)
T ss_pred ----------------------EeCCCCCccccccCCCCC-----HHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe--
Confidence 12555444210 000000 134566777789999999999999999999997
Q ss_pred EEEcCCCCC-CCCCCCCcEEecCCCcchHHHH
Q 017067 341 VVMRSSLTS-RAEFPSANAVMDGFGGADLTIS 371 (378)
Q Consensus 341 i~v~~~~~~-~~~l~~ad~vi~~l~e~~~~~~ 371 (378)
++.++.... .++...+...++++.|+...++
T Consensus 178 ~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 178 CFARDYLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred eEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 444432111 1222235566788877755554
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.8e-15 Score=140.97 Aligned_cols=61 Identities=13% Similarity=0.180 Sum_probs=54.3
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCC----------CCcEEecCCCcc
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFP----------SANAVMDGFGGA 366 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~----------~ad~vi~~l~e~ 366 (378)
|..+++++|++|++|+||||+. +||++|+++||++|+|.+|....+++. .+|++++++.++
T Consensus 208 ~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 208 FECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred HHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 8999999999999999999995 999999999999999999987654443 489999999875
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.2e-14 Score=129.41 Aligned_cols=114 Identities=18% Similarity=0.253 Sum_probs=82.9
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
.++||+.++|+.++++|++++|+|+ +....++.+++.+|+..+|...+...++ +.+. |
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~---s~~~~v~~~~~~lg~~~~~~~~l~~~~~---g~~~----g------------ 144 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSA---SLTILVKPLARILGIDNAIGTRLEESED---GIYT----G------------ 144 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHcCCcceEecceEEcCC---CEEe----C------------
Confidence 5899999999999999999999999 5578999999999998877653322111 0111 1
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
|+.... ...+++. ..++..+++.++++++|+++|||.+|+.+++.+|.++++.
T Consensus 145 ----------------------~~~~~~--~~g~~K~---~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 145 ----------------------NIDGNN--CKGEGKV---HALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ----------------------CccCCC--CCChHHH---HHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 111000 0011112 2278888999999999999999999999999999988776
Q ss_pred cCC
Q 017067 344 RSS 346 (378)
Q Consensus 344 ~~~ 346 (378)
+++
T Consensus 198 ~~~ 200 (202)
T TIGR01490 198 PDK 200 (202)
T ss_pred CCC
Confidence 543
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.7e-14 Score=134.22 Aligned_cols=61 Identities=8% Similarity=0.218 Sum_probs=53.8
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCC----CCcEEecCCCcc
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFP----SANAVMDGFGGA 366 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~----~ad~vi~~l~e~ 366 (378)
|+.+++++++++++++||||+. +||.+|+++||++++|.++.....++. .+|++++++.++
T Consensus 184 ~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 184 MEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred HHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 9999999999999999999996 899999999999999999987655442 479999998764
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.55 E-value=8.9e-14 Score=124.41 Aligned_cols=111 Identities=19% Similarity=0.217 Sum_probs=74.5
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+. +++++....+ .+....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~-i~~~~~~~~~--------~g~~~~----- 133 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISD---GNDFFIDPVLEGIGEKDVFIE-IYSNPASFDN--------DGRHIV----- 133 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeC---CcHHHHHHHHHHcCChhheeE-EeccCceECC--------CCcEEE-----
Confidence 57999999999999999999999999 446888999999999999987 5555432110 000000
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhcccc--ccC-CCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCC
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSV--DID-TSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p--~i~-kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 339 (378)
-|.. ... .+....++++ |+...+.. +++|+||||+.+|+.+|+++++-
T Consensus 134 -----------------------~~~~~~~~~~~~~g~~K~~~---~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 134 -----------------------WPHHCHGCCSCPCGCCKGKV---IHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred -----------------------ecCCCCccCcCCCCCCHHHH---HHHHHhhc---CceEEEECCCcchhchHhcCCcc
Confidence 0000 000 0001112333 55555543 89999999999999999999743
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.53 E-value=8.9e-14 Score=135.79 Aligned_cols=63 Identities=10% Similarity=-0.009 Sum_probs=55.7
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCC------CCCcEEecCCCcchH
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEF------PSANAVMDGFGGADL 368 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l------~~ad~vi~~l~e~~~ 368 (378)
|..+++++++++++|+||||+. +||++|+++||++|+|.++....+++ ..+|++++++.++..
T Consensus 236 ~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~ 305 (311)
T PLN02645 236 MDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLT 305 (311)
T ss_pred HHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHH
Confidence 8999999999999999999997 99999999999999999998765543 347999999998754
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.1e-13 Score=122.86 Aligned_cols=107 Identities=18% Similarity=0.266 Sum_probs=74.9
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
.++++||+.++|+.++++|++++|+|+ +....++.+++.+|+...+...+...++. . ..|....
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~---~~~~~i~~~~~~~g~~~~~~~~~~~~~~g---~----~~g~~~~------ 134 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSG---GFDFFVEPVAEKLGIDDVFANRLEFDDNG---L----LTGPIEG------ 134 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCchheeeeEEECCCC---E----EeCccCC------
Confidence 356899999999999999999999999 55789999999999987665543222110 0 0110000
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHc
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 336 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a 336 (378)
||. |....+..+ ++..++..|+++++|++|||+.+|+.+++.|
T Consensus 135 ------------------------~~~-----~~~~~K~~~---l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 135 ------------------------QVN-----PEGECKGKV---LKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred ------------------------ccc-----CCcchHHHH---HHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 000 111122223 6777888899999999999999999998764
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.5e-14 Score=126.82 Aligned_cols=108 Identities=9% Similarity=0.115 Sum_probs=85.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCC------------chHHHHHHHHHhCccccchheeec----hhhHHHhhhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS------------GDRIARSVVEKLGSERISKIKIVG----NEEVERSLYG 246 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~------------~~~~~~~~l~~lgi~~~f~~~iv~----~~~~~~~~~~ 246 (378)
++++||+.++|+.|+++|++++|+||.+.- ....+..+++.+|+. |+..+++ .++..
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~----- 100 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCD----- 100 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCC-----
Confidence 458999999999999999999999995300 134667788899996 5543343 12211
Q ss_pred ccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 017067 247 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 326 (378)
Q Consensus 247 ~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs 326 (378)
.+||+|++ |..++++++++|++|+||||+
T Consensus 101 -------------------------------------~~KP~~~~--------------~~~~~~~~~~~~~e~l~IGD~ 129 (161)
T TIGR01261 101 -------------------------------------CRKPKIKL--------------LEPYLKKNLIDKARSYVIGDR 129 (161)
T ss_pred -------------------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEEeCC
Confidence 23777666 999999999999999999999
Q ss_pred HhHHHHHHHcCCCEEEEcCCCC
Q 017067 327 QSGVAGAQRIGMPCVVMRSSLT 348 (378)
Q Consensus 327 ~~Di~aA~~aG~~~i~v~~~~~ 348 (378)
.+|+++|+++||+++++..+..
T Consensus 130 ~~Di~~A~~aGi~~i~~~~~~~ 151 (161)
T TIGR01261 130 ETDMQLAENLGIRGIQYDEEEL 151 (161)
T ss_pred HHHHHHHHHCCCeEEEEChhhc
Confidence 9999999999999999987743
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.5e-14 Score=137.53 Aligned_cols=127 Identities=15% Similarity=0.074 Sum_probs=88.5
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhH
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 264 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~ 264 (378)
.++++.+.++.|++.|++++++||..+ ......+..+|+..+|+.. ...... .
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~---~~~~~~~~~~g~g~~~~~i-~~~~~~-----------~------------ 173 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGR---YYKRKDGLALDVGPFVTAL-EYATDT-----------K------------ 173 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCC---CCcCCCCCCCCchHHHHHH-HHHhCC-----------C------------
Confidence 467888899999999999999999653 3223333445555555431 000000 0
Q ss_pred HHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEE
Q 017067 265 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVM 343 (378)
Q Consensus 265 ~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v 343 (378)
.....||+|++ |+.+++++|++|++|+||||+. +||.+|+++||++++|
T Consensus 174 ----------------~~~~gKP~p~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v 223 (257)
T TIGR01458 174 ----------------ATVVGKPSKTF--------------FLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQV 223 (257)
T ss_pred ----------------ceeecCCCHHH--------------HHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEE
Confidence 00012555555 9999999999999999999996 8999999999999999
Q ss_pred cCCCCCCC--CC--CCCcEEecCCCcchH
Q 017067 344 RSSLTSRA--EF--PSANAVMDGFGGADL 368 (378)
Q Consensus 344 ~~~~~~~~--~l--~~ad~vi~~l~e~~~ 368 (378)
.++..... +. ..+|++++++.|+..
T Consensus 224 ~~G~~~~~~~~~~~~~pd~~~~sl~el~~ 252 (257)
T TIGR01458 224 RTGKYRPSDEEKINVPPDLTCDSLPHAVD 252 (257)
T ss_pred CCCCCChHHhcccCCCCCEEECCHHHHHH
Confidence 98864322 12 347999999998854
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.4e-13 Score=114.92 Aligned_cols=116 Identities=19% Similarity=0.205 Sum_probs=83.2
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhh-hhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSL-YGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~-~~~~v~g~~v~~~~~~~ 261 (378)
..++|++.++|+.|+++|++++++|| +....+...++.+++...++.. ++.+...... ...... +
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~---~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~------~---- 88 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATN---KSRREVLELLEELGLDDYFDPV-ITSNGAAIYYPKEGLFL------G---- 88 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeC---chHHHHHHHHHHcCCchhhhhe-eccchhhhhcccccccc------c----
Confidence 45899999999999999999999999 4578899999999998777763 3332221100 000000 0
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
......+||.+.. +..+++.++..++++++|||+.+|+++++.+|++++
T Consensus 89 -----------------~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 89 -----------------GGPFDIGKPNPDK--------------LLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred -----------------ccccccCCCCHHH--------------HHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 0000111333322 888999999999999999999999999999999998
Q ss_pred EE
Q 017067 342 VM 343 (378)
Q Consensus 342 ~v 343 (378)
+|
T Consensus 138 ~v 139 (139)
T cd01427 138 AV 139 (139)
T ss_pred eC
Confidence 75
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.2e-13 Score=126.39 Aligned_cols=77 Identities=12% Similarity=0.183 Sum_probs=62.6
Q ss_pred hhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCC----CCc
Q 017067 283 SMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFP----SAN 357 (378)
Q Consensus 283 ~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~----~ad 357 (378)
..++|.. ++||+|.. |..++++++++|++|+||||+. +||.+|+++||++++|.++....+++. .+|
T Consensus 165 ~g~~~~~-~gKP~~~~-------~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd 236 (248)
T PRK10444 165 SGRKPFY-VGKPSPWI-------IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPS 236 (248)
T ss_pred hCCCccc-cCCCCHHH-------HHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCC
Confidence 3444432 45555543 8999999999999999999996 899999999999999999988766553 489
Q ss_pred EEecCCCcch
Q 017067 358 AVMDGFGGAD 367 (378)
Q Consensus 358 ~vi~~l~e~~ 367 (378)
++++++.++.
T Consensus 237 ~~~~sl~el~ 246 (248)
T PRK10444 237 WIYPSVADID 246 (248)
T ss_pred EEECCHHHhh
Confidence 9999998873
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.8e-13 Score=125.77 Aligned_cols=191 Identities=14% Similarity=0.129 Sum_probs=115.2
Q ss_pred cEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCC--CCCchhhHHH
Q 017067 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPT--SVPTNEKKAF 162 (378)
Q Consensus 85 kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~--~l~~~~~~~~ 162 (378)
+.++|||||||++. .|.+...+.|+.. . .... +....+..+...++.+.. .++.
T Consensus 2 ~la~FDlD~TLi~~-------~w~~~~~~~g~~~------~-~~~~----~~~~~~~~~~~~r~~ll~~~g~~~------ 57 (203)
T TIGR02137 2 EIACLDLEGVLVPE-------IWIAFAEKTGIDA------L-KATT----RDIPDYDVLMKQRLRILDEHGLKL------ 57 (203)
T ss_pred eEEEEeCCcccHHH-------HHHHHHHHcCCcH------H-HHHh----cCCcCHHHHHHHHHHHHHHCCCCH------
Confidence 46899999999974 3677777888641 1 1111 122233334443332221 1211
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
+.+.+.+. .++++||+.++|+.++++| +++|+|+ +....+..+++.+|+..+|...+...+.
T Consensus 58 ---------~~i~~~~~--~i~l~pga~ell~~lk~~~-~~~IVS~---~~~~~~~~il~~lgi~~~~an~l~~~~~--- 119 (203)
T TIGR02137 58 ---------GDIQEVIA--TLKPLEGAVEFVDWLRERF-QVVILSD---TFYEFSQPLMRQLGFPTLLCHKLEIDDS--- 119 (203)
T ss_pred ---------HHHHHHHH--hCCCCccHHHHHHHHHhCC-eEEEEeC---ChHHHHHHHHHHcCCchhhceeeEEecC---
Confidence 11123332 2569999999999999985 9999999 5679999999999999887654332210
Q ss_pred hhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017067 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (378)
Q Consensus 243 ~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~ 322 (378)
+ .+.|..+. .+| .... +...++..|. +|++
T Consensus 120 g----~~tG~~~~------------------------------------~~~---~K~~----~l~~l~~~~~---~~v~ 149 (203)
T TIGR02137 120 D----RVVGYQLR------------------------------------QKD---PKRQ----SVIAFKSLYY---RVIA 149 (203)
T ss_pred C----eeECeeec------------------------------------Ccc---hHHH----HHHHHHhhCC---CEEE
Confidence 0 01111000 001 1111 2233345553 8999
Q ss_pred EeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCc-EEecCCCcchHHH
Q 017067 323 IAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSAN-AVMDGFGGADLTI 370 (378)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad-~vi~~l~e~~~~~ 370 (378)
|||+.||+.+++.||+++++...+..... ..| -++.++.|+...+
T Consensus 150 vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~---~~~~~~~~~~~~~~~~~ 195 (203)
T TIGR02137 150 AGDSYNDTTMLSEAHAGILFHAPENVIRE---FPQFPAVHTYEDLKREF 195 (203)
T ss_pred EeCCHHHHHHHHhCCCCEEecCCHHHHHh---CCCCCcccCHHHHHHHH
Confidence 99999999999999999999887744332 012 2566666664443
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.2e-13 Score=121.51 Aligned_cols=90 Identities=17% Similarity=0.271 Sum_probs=73.7
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.+++|++.++|+.|+++|++++++|+ .....+..+.+.+|+.+.. +++. ..
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TG---D~~~~a~~~~~~lgi~~~~---v~a~-~~---------------------- 176 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTG---DNESTASAIAKQLGIFDSI---VFAR-VI---------------------- 176 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEES---SEHHHHHHHHHHTTSCSEE---EEES-HE----------------------
T ss_pred CcchhhhhhhhhhhhccCcceeeeec---ccccccccccccccccccc---cccc-cc----------------------
Confidence 46899999999999999999999998 5578999999999995521 1111 00
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcC
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 337 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG 337 (378)
.||++.+ |..+++.+++++++|+||||+.||+.|+++||
T Consensus 177 ----------------------~kP~~k~--------------~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 177 ----------------------GKPEPKI--------------FLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ----------------------TTTHHHH--------------HHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ----------------------ccccchh--------------HHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 0444443 89999999999999999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.8e-13 Score=120.14 Aligned_cols=104 Identities=14% Similarity=0.244 Sum_probs=83.0
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
...++||+.++|+.|+++|++++|+||... ...+..+++.+|+..++.
T Consensus 41 ~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~--~~~~~~~~~~~gl~~~~~------------------------------ 88 (170)
T TIGR01668 41 HNEAYPALRDWIEELKAAGRKLLIVSNNAG--EQRAKAVEKALGIPVLPH------------------------------ 88 (170)
T ss_pred CCCcChhHHHHHHHHHHcCCEEEEEeCCch--HHHHHHHHHHcCCEEEcC------------------------------
Confidence 346899999999999999999999999531 355556666666543210
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 340 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~ 340 (378)
..||+|++ |..+++++|++|++|+||||+. .|+.+|+++||.+
T Consensus 89 ----------------------~~KP~p~~--------------~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 89 ----------------------AVKPPGCA--------------FRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred ----------------------CCCCChHH--------------HHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 01666666 9999999999999999999998 7999999999999
Q ss_pred EEEcCCCCCCCCC
Q 017067 341 VVMRSSLTSRAEF 353 (378)
Q Consensus 341 i~v~~~~~~~~~l 353 (378)
|++.++....+.+
T Consensus 133 i~v~~g~~~~~~~ 145 (170)
T TIGR01668 133 ILVEPLVHPDQWF 145 (170)
T ss_pred EEEccCcCCcccc
Confidence 9999887665433
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.6e-12 Score=117.58 Aligned_cols=193 Identities=12% Similarity=0.071 Sum_probs=112.4
Q ss_pred CccEEEEecccccccccccchHHHHHHHH-HHcCCCCCCCChhHHHHHHhhccCChHHH-----HHHHHH-HcCCCCCCC
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAF-QKLGLDCANWTAPIYTDLLRKSAGDEDRM-----LVLFFN-RIGWPTSVP 155 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~-~~~gl~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~-~~g~~~~l~ 155 (378)
+.++++||+||||++... ...|..++ .++|++. .+...+..+++......... ...+.. ..|.+
T Consensus 5 ~~k~~iFD~DGTL~~~d~---~~~~~~~~~~~~g~~~--~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~---- 75 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQDM---FGSFLRYLLRRQPLNL--LLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHS---- 75 (211)
T ss_pred cceEEEEecCCCCcccch---HHHHHHHHHHhcchhh--HHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCC----
Confidence 457999999999995543 47777777 7888762 22222222222111000000 000111 11221
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHH-HHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchhee
Q 017067 156 TNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFV-DDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 234 (378)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL-~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~i 234 (378)
.+ .++.+.+.+.+.|.+. ..++||+.++| +.++++|++++|+|| ++...++.+++.+|+..... +
T Consensus 76 ~~----~~~~~~~~f~~~~~~~-----~~~~pga~e~L~~~l~~~G~~l~IvSa---s~~~~~~~il~~l~~~~~~~--~ 141 (211)
T PRK11590 76 EA----RLQALEADFVRWFRDN-----VTAFPVVQERLTTYLLSSDADVWLITG---SPQPLVEQVYFDTPWLPRVN--L 141 (211)
T ss_pred HH----HHHHHHHHHHHHHHHh-----CcCCccHHHHHHHHHHhCCCEEEEEeC---CcHHHHHHHHHHccccccCc--e
Confidence 11 2334444444444332 45799999999 578889999999999 45788999999999633222 2
Q ss_pred echhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcC
Q 017067 235 VGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE 314 (378)
Q Consensus 235 v~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lg 314 (378)
++.+ .+. .|++.+.|.... . ++. .....+.+|
T Consensus 142 i~t~-l~~-~~tg~~~g~~c~------------------------------------------g-~~K---~~~l~~~~~ 173 (211)
T PRK11590 142 IASQ-MQR-RYGGWVLTLRCL------------------------------------------G-HEK---VAQLERKIG 173 (211)
T ss_pred EEEE-EEE-EEccEECCccCC------------------------------------------C-hHH---HHHHHHHhC
Confidence 3332 111 233333332110 0 001 233445557
Q ss_pred CCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCC
Q 017067 315 KPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 315 v~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (378)
.+...+++.|||.+|+.+...+|-+.++-+++
T Consensus 174 ~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~~ 205 (211)
T PRK11590 174 TPLRLYSGYSDSKQDNPLLYFCQHRWRVTPRG 205 (211)
T ss_pred CCcceEEEecCCcccHHHHHhCCCCEEECccH
Confidence 77889999999999999999999888775544
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=7.4e-13 Score=126.01 Aligned_cols=181 Identities=16% Similarity=0.202 Sum_probs=122.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH-hCccccchheeechhhHHHhhhhcc-------c-----
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSLYGQF-------V----- 249 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~-lgi~~~f~~~iv~~~~~~~~~~~~~-------v----- 249 (378)
-.++||+.++|+.|+++|.+++++||+++.........++. .+++-..+. ++++.+.....+... +
T Consensus 23 ~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~-i~TS~~at~~~l~~~~~~~kv~viG~~~ 101 (269)
T COG0647 23 NEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDD-IVTSGDATADYLAKQKPGKKVYVIGEEG 101 (269)
T ss_pred CccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHH-eecHHHHHHHHHHhhCCCCEEEEECCcc
Confidence 45899999999999999999999999987767756677777 445332222 333333333222111 0
Q ss_pred -------------c-c-----cccccCcchhhhHHH---------------------------HHHhhHHHHHHHHHHHh
Q 017067 250 -------------L-G-----KGISSGVDEQLATEA---------------------------RKAVSAQKQEIAEEVAS 283 (378)
Q Consensus 250 -------------~-g-----~~v~~~~~~~~~~~~---------------------------~ka~~~~~~~~~~~~~~ 283 (378)
. . +.|.-+.|+.+..+. .=-.++....-+-+.+.
T Consensus 102 l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~t 181 (269)
T COG0647 102 LKEELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGAPFIATNPDLTVPTERGLRPGAGAIAALLEQAT 181 (269)
T ss_pred hHHHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCCcEEEeCCCccccCCCCCccCcHHHHHHHHHhh
Confidence 0 1 113333333333222 21112222222335666
Q ss_pred hhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCCC----CcE
Q 017067 284 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFPS----ANA 358 (378)
Q Consensus 284 ~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~----ad~ 358 (378)
.++| .-++||++.. |+.+++.++.++++++||||+. +||.+|.++||.++.|.+|.+..+++.. +++
T Consensus 182 g~~~-~~~GKP~~~i-------~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~ 253 (269)
T COG0647 182 GREP-TVIGKPSPAI-------YEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTY 253 (269)
T ss_pred CCcc-cccCCCCHHH-------HHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcc
Confidence 6777 7888877664 9999999999999999999996 7999999999999999999987666542 589
Q ss_pred EecCCCcchHHHHH
Q 017067 359 VMDGFGGADLTISK 372 (378)
Q Consensus 359 vi~~l~e~~~~~~~ 372 (378)
+++++.++...+..
T Consensus 254 v~~sl~~~~~~~~~ 267 (269)
T COG0647 254 VVDSLAELITALKE 267 (269)
T ss_pred hHhhHHHHHhhhhc
Confidence 99999998655543
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.6e-13 Score=105.98 Aligned_cols=69 Identities=16% Similarity=0.276 Sum_probs=62.3
Q ss_pred hhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCC-HhHHHHHHHcCCCEEEEcCCCCCCCCC----CCCcE
Q 017067 284 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSSLTSRAEF----PSANA 358 (378)
Q Consensus 284 ~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~~~l----~~ad~ 358 (378)
++||+|.+ |..++++++++|++|+||||+ .+||.+|+++||.+|+|.++....+++ ..+|+
T Consensus 2 ~gKP~p~~--------------~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~ 67 (75)
T PF13242_consen 2 CGKPSPGM--------------LEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDY 67 (75)
T ss_dssp CSTTSHHH--------------HHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSE
T ss_pred CCCCcHHH--------------HHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCE
Confidence 46888887 999999999999999999999 899999999999999999998877654 36899
Q ss_pred EecCCCcc
Q 017067 359 VMDGFGGA 366 (378)
Q Consensus 359 vi~~l~e~ 366 (378)
|+++|.|+
T Consensus 68 vv~~l~e~ 75 (75)
T PF13242_consen 68 VVDDLKEA 75 (75)
T ss_dssp EESSGGGH
T ss_pred EECCHHhC
Confidence 99999875
|
... |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.1e-12 Score=117.61 Aligned_cols=107 Identities=8% Similarity=0.188 Sum_probs=77.7
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCC-chHHHHHHHHHhCc--cccchheeechhhHHHhhhhccccccccccCcc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGS--ERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~-~~~~~~~~l~~lgi--~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~ 259 (378)
..+.||+.++|+.|+++|++++++||...+ ....+..+++.+|+ .++|.. +++.+..
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~v-il~gd~~------------------- 172 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPV-IFAGDKP------------------- 172 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeE-EEcCCCC-------------------
Confidence 568999999999999999999999995421 23466677777999 888865 3333211
Q ss_pred hhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCC
Q 017067 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 260 ~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 339 (378)
.||+ + ..+++.+++ +|||||+.+|+.+|++||++
T Consensus 173 -------------------------~K~~-------K----------~~~l~~~~i----~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 -------------------------GQYT-------K----------TQWLKKKNI----RIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred -------------------------CCCC-------H----------HHHHHhcCC----eEEEcCCHHHHHHHHHcCCc
Confidence 0222 1 113456665 99999999999999999999
Q ss_pred EEEEcCCCCCC-CCCCC
Q 017067 340 CVVMRSSLTSR-AEFPS 355 (378)
Q Consensus 340 ~i~v~~~~~~~-~~l~~ 355 (378)
+|.+.++.... ..++.
T Consensus 207 ~I~v~~G~~~~~~~~~~ 223 (237)
T PRK11009 207 GIRILRAANSTYKPLPQ 223 (237)
T ss_pred EEEEecCCCCCCCcccc
Confidence 99999886643 34443
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.7e-11 Score=113.04 Aligned_cols=141 Identities=21% Similarity=0.259 Sum_probs=94.6
Q ss_pred CCCCCchhhHHHHHHHHHHHHH----------HHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHH
Q 017067 151 PTSVPTNEKKAFVKNVLQEKKN----------ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSV 220 (378)
Q Consensus 151 ~~~l~~~~~~~~i~~~~~~~~~----------~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~ 220 (378)
...++.+|+-..+.++.....+ ...+.+....++++||+.++++.|+++|++++|+|+ +....++.+
T Consensus 78 d~~~~~~eK~~~m~eWw~k~~~l~~~~~~~~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~---G~~~~Ie~v 154 (277)
T TIGR01544 78 DPVLTVEEKYPYMVEWWTKSHGLLVQQAFPKAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSA---GIGNVLEEV 154 (277)
T ss_pred CCCCChHHhhhHHHHHHHHHHHHHhcCCCCHHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeC---CcHHHHHHH
Confidence 3345566665555555544332 233344334688999999999999999999999999 667999999
Q ss_pred HHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhH
Q 017067 221 VEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLD 300 (378)
Q Consensus 221 l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~ 300 (378)
++.+|+.+.+.. ++++.-. ...+++..| ||.|-|.. -...
T Consensus 155 L~~lgl~~~~~~-IvSN~L~--------f~~dGvltG----------------------------~~~P~i~~---~~K~ 194 (277)
T TIGR01544 155 LRQAGVYHPNVK-VVSNFMD--------FDEDGVLKG----------------------------FKGPLIHT---FNKN 194 (277)
T ss_pred HHHcCCCCcCce-EEeeeEE--------ECCCCeEeC----------------------------CCCCcccc---cccH
Confidence 999998765533 5444211 112233333 44443311 1111
Q ss_pred HHHHHHHHHHHHcC--CCCCcEEEEeCCHhHHHHHHHc
Q 017067 301 KIVAALRAGAEYAE--KPVRNCFLIAGSQSGVAGAQRI 336 (378)
Q Consensus 301 ~~~~a~~~a~~~lg--v~p~~~i~VGDs~~Di~aA~~a 336 (378)
+. +++.++++++ +++++||+|||+.+|+.||..+
T Consensus 195 ~~--v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 195 HD--VALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred HH--HHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 11 2667889999 8999999999999999998766
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=7.4e-12 Score=121.09 Aligned_cols=113 Identities=13% Similarity=0.051 Sum_probs=86.9
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc-cchheeechhhHHHhhhhccccccccccCcch
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~-~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~ 260 (378)
...++||+.++|+.|+++|++++++||. .....+..++.+++.. +|+. +++.+.... +.. .
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r---~~~~~~~~l~~l~~~~~~f~~-i~~~~~~~~-~~~------~------- 246 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSGR---DGVCEEDTVEWLRQTDIWFDD-LIGRPPDMH-FQR------E------- 246 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeCC---ChhhHHHHHHHHHHcCCchhh-hhCCcchhh-hcc------c-------
Confidence 3568999999999999999999999994 4688889999999987 7876 333331110 000 0
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCC-CCCcEEEEeCCHhHHHHHHHcCCC
Q 017067 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK-PVRNCFLIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 261 ~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv-~p~~~i~VGDs~~Di~aA~~aG~~ 339 (378)
...+||+|++ +..++++++. +|++|++|||+.+|+++|+++||+
T Consensus 247 ---------------------~~~~kp~p~~--------------~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~ 291 (300)
T PHA02530 247 ---------------------QGDKRPDDVV--------------KEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLE 291 (300)
T ss_pred ---------------------CCCCCCcHHH--------------HHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCe
Confidence 0011444444 8888999998 689999999999999999999999
Q ss_pred EEEEcCCC
Q 017067 340 CVVMRSSL 347 (378)
Q Consensus 340 ~i~v~~~~ 347 (378)
+|+|.+|.
T Consensus 292 ~i~v~~g~ 299 (300)
T PHA02530 292 CWQVAPGD 299 (300)
T ss_pred EEEecCCC
Confidence 99998763
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.2e-11 Score=110.32 Aligned_cols=173 Identities=14% Similarity=0.250 Sum_probs=117.3
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHH
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i 163 (378)
-++|.||||.|++.-+.+ .+.....|+. +......+..++++..+.+.+.+++.+-..+
T Consensus 16 ~~aVcFDvDSTvi~eEgI------delA~~~G~~------~~Va~~T~rAMng~~~F~eaL~~Rl~llqp~--------- 74 (227)
T KOG1615|consen 16 ADAVCFDVDSTVIQEEGI------DELAAYCGVG------EAVAEVTRRAMNGEADFQEALAARLSLLQPL--------- 74 (227)
T ss_pred cCeEEEecCcchhHHhhH------HHHHHHhCch------HHHHHHHHHHhCCCCcHHHHHHHHHHHhccc---------
Confidence 469999999999987775 5555555765 6666777777777777777777777544321
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc--cchheeechhhHH
Q 017067 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIKIVGNEEVE 241 (378)
Q Consensus 164 ~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~--~f~~~iv~~~~~~ 241 (378)
.. ....++......+-||+++++..|+++|..++++|+ ++..++..+...||+.. .+...+....+.
T Consensus 75 ----~~---qv~~~v~~~k~~lT~Gi~eLv~~L~~~~~~v~liSG---GF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~G- 143 (227)
T KOG1615|consen 75 ----QV---QVEQFVIKQKPTLTPGIRELVSRLHARGTQVYLISG---GFRQLIEPVAEQLGIPKSNIYANELLFDKDG- 143 (227)
T ss_pred ----HH---HHHHHHhcCCCccCCCHHHHHHHHHHcCCeEEEEcC---ChHHHHHHHHHHhCCcHhhhhhheeeeccCC-
Confidence 11 112333344677999999999999999999999999 88999999999999976 554433322211
Q ss_pred Hhhhhcc-ccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcE
Q 017067 242 RSLYGQF-VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (378)
Q Consensus 242 ~~~~~~~-v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~ 320 (378)
+|..+ ..+..+.++ ...++ ++...+ +++-..+
T Consensus 144 --k~~gfd~~~ptsdsg----------------------------------------gKa~~---i~~lrk--~~~~~~~ 176 (227)
T KOG1615|consen 144 --KYLGFDTNEPTSDSG----------------------------------------GKAEV---IALLRK--NYNYKTI 176 (227)
T ss_pred --cccccccCCccccCC----------------------------------------ccHHH---HHHHHh--CCChhee
Confidence 12111 111111221 11222 444444 8889999
Q ss_pred EEEeCCHhHHHHHHH
Q 017067 321 FLIAGSQSGVAGAQR 335 (378)
Q Consensus 321 i~VGDs~~Di~aA~~ 335 (378)
+||||+.+|++|..-
T Consensus 177 ~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 177 VMVGDGATDLEAMPP 191 (227)
T ss_pred EEecCCccccccCCc
Confidence 999999999988766
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.25 E-value=9e-11 Score=120.73 Aligned_cols=98 Identities=19% Similarity=0.204 Sum_probs=72.6
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
.++++||+.++|++++++|++++++||+ ....++.+++++|+ |+. +++.++..+.
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTas---~~~~a~~i~~~lGl---Fd~-Vigsd~~~~~------------------ 124 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATAS---DERLAQAVAAHLGL---FDG-VFASDGTTNL------------------ 124 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHcCC---CCE-EEeCCCcccc------------------
Confidence 4678999999999999999999999994 46889999999997 554 4555433210
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
| |++| .....+.++ .++++++||+.+|+.+++.+| +.+
T Consensus 125 ------------------------k-------g~~K--------~~~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av 162 (479)
T PRK08238 125 ------------------------K-------GAAK--------AAALVEAFG--ERGFDYAGNSAADLPVWAAAR-RAI 162 (479)
T ss_pred ------------------------C-------CchH--------HHHHHHHhC--ccCeeEecCCHHHHHHHHhCC-CeE
Confidence 2 2222 122345555 467999999999999999999 666
Q ss_pred EEcCC
Q 017067 342 VMRSS 346 (378)
Q Consensus 342 ~v~~~ 346 (378)
.|+.+
T Consensus 163 ~Vn~~ 167 (479)
T PRK08238 163 VVGAS 167 (479)
T ss_pred EECCC
Confidence 66654
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.9e-11 Score=119.59 Aligned_cols=110 Identities=14% Similarity=0.173 Sum_probs=80.2
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCC---CC---------chHHHHHHHHHhCccccchheeechhhHHHhhhhcccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYG---KS---------GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 250 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~---~~---------~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~ 250 (378)
..++||+.++|+.|+++|++++|+||.+ ++ .......+++.+|+. |+..+++....
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~---------- 96 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFP---------- 96 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcC----------
Confidence 4699999999999999999999999941 00 123455667777773 43322221000
Q ss_pred ccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHH
Q 017067 251 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 330 (378)
Q Consensus 251 g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di 330 (378)
.+. +..+||+|++ |..+++.++++|++|+||||+.+|+
T Consensus 97 sd~----------------------------~~~rKP~p~~--------------l~~a~~~l~v~~~~svmIGDs~sDi 134 (354)
T PRK05446 97 EDN----------------------------CSCRKPKTGL--------------VEEYLAEGAIDLANSYVIGDRETDV 134 (354)
T ss_pred ccc----------------------------CCCCCCCHHH--------------HHHHHHHcCCCcccEEEEcCCHHHH
Confidence 000 0123666666 8899999999999999999999999
Q ss_pred HHHHHcCCCEEEEcCC
Q 017067 331 AGAQRIGMPCVVMRSS 346 (378)
Q Consensus 331 ~aA~~aG~~~i~v~~~ 346 (378)
++|+++||++|+++..
T Consensus 135 ~aAk~aGi~~I~v~~~ 150 (354)
T PRK05446 135 QLAENMGIKGIRYARE 150 (354)
T ss_pred HHHHHCCCeEEEEECC
Confidence 9999999999999543
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.8e-11 Score=104.89 Aligned_cols=104 Identities=15% Similarity=0.163 Sum_probs=82.7
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhh
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~ 271 (378)
.|++|+++|++++|+||. ....+..+++.+|+..+|+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn~---~~~~~~~~l~~~gi~~~~~~~-------------------------------------- 74 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGR---KAKLVEDRCKTLGITHLYQGQ-------------------------------------- 74 (154)
T ss_pred HHHHHHHCCCEEEEEECC---CCHHHHHHHHHcCCCEEEecc--------------------------------------
Confidence 789999999999999994 457888999999998877431
Q ss_pred HHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC
Q 017067 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA 351 (378)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 351 (378)
||.|+. +..+++++|+++++|+||||+.+|+.+++.+|+. +.+.+... .
T Consensus 75 --------------~~k~~~--------------~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~~--~ 123 (154)
T TIGR01670 75 --------------SNKLIA--------------FSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAHP--L 123 (154)
T ss_pred --------------cchHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcCH--H
Confidence 222222 8899999999999999999999999999999997 66665532 2
Q ss_pred CCCCCcEEecCCCcch
Q 017067 352 EFPSANAVMDGFGGAD 367 (378)
Q Consensus 352 ~l~~ad~vi~~l~e~~ 367 (378)
..+.|++++++..+-+
T Consensus 124 ~~~~a~~i~~~~~~~g 139 (154)
T TIGR01670 124 LIPRADYVTRIAGGRG 139 (154)
T ss_pred HHHhCCEEecCCCCCc
Confidence 2344799998887633
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.5e-10 Score=113.53 Aligned_cols=72 Identities=10% Similarity=0.189 Sum_probs=56.0
Q ss_pred ccCCCCcchhHHHHHHHHHHHHHc--------CC-----CCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCC--
Q 017067 290 DIDTSSPESLDKIVAALRAGAEYA--------EK-----PVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEF-- 353 (378)
Q Consensus 290 ~i~kp~p~~~~~~~~a~~~a~~~l--------gv-----~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l-- 353 (378)
-++||+|.. |+.+++.+ ++ ++++++||||+. +||.+|+++||.+|+|.+|.....+.
T Consensus 230 ~~GKP~~~~-------~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~ 302 (321)
T TIGR01456 230 TLGKPTKLT-------YDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLK 302 (321)
T ss_pred EcCCCChHH-------HHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCC
Confidence 457877775 77777776 43 457999999997 89999999999999999985544332
Q ss_pred -CCCcEEecCCCcchH
Q 017067 354 -PSANAVMDGFGGADL 368 (378)
Q Consensus 354 -~~ad~vi~~l~e~~~ 368 (378)
..++++++++.|+..
T Consensus 303 ~~~p~~vv~~l~e~~~ 318 (321)
T TIGR01456 303 ECKPTLIVNDVFDAVT 318 (321)
T ss_pred CCCCCEEECCHHHHHH
Confidence 237999999998743
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.8e-11 Score=106.82 Aligned_cols=94 Identities=21% Similarity=0.188 Sum_probs=76.2
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc-chheeechhhHHHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI-SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~-f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
+.++||+.++|+.|+ ++++++|+||+ ....++.+++.+++..+ |+. +++.+++...
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~---~~~~~~~il~~l~~~~~~f~~-i~~~~d~~~~------------------ 100 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAG---LRMYADPVLDLLDPKKYFGYR-RLFRDECVFV------------------ 100 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCC---cHHHHHHHHHHhCcCCCEeee-EEECcccccc------------------
Confidence 568999999999999 57999999995 46888999999999654 465 5555544321
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
||+ |..+++++|++|++||+|||+.+|+.++.++|+.+
T Consensus 101 ------------------------KP~-----------------~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 101 ------------------------KGK-----------------YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred ------------------------CCe-----------------EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 443 56778999999999999999999999999999543
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.7e-10 Score=108.23 Aligned_cols=59 Identities=12% Similarity=0.074 Sum_probs=46.3
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
++.+++++|++++++++|||+.||+.|++.+|+. +..++....-...|++|+++-.+-+
T Consensus 204 l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~---vamgna~~~lk~~Ad~v~~~n~~dG 262 (272)
T PRK10530 204 LTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLG---VAMGNADDAVKARADLVIGDNTTPS 262 (272)
T ss_pred HHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCce---EEecCchHHHHHhCCEEEecCCCCc
Confidence 8899999999999999999999999999999963 3334333222345899998776643
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.14 E-value=8.9e-11 Score=102.63 Aligned_cols=98 Identities=17% Similarity=0.291 Sum_probs=80.6
Q ss_pred cCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcc
Q 017067 180 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (378)
Q Consensus 180 ~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~ 259 (378)
.+....-|.+++.+.+++++|+++.|+|| +.+.-+....+.+|+.-....
T Consensus 42 wd~~~~tpe~~~W~~e~k~~gi~v~vvSN---n~e~RV~~~~~~l~v~fi~~A--------------------------- 91 (175)
T COG2179 42 WDNPDATPELRAWLAELKEAGIKVVVVSN---NKESRVARAAEKLGVPFIYRA--------------------------- 91 (175)
T ss_pred ccCCCCCHHHHHHHHHHHhcCCEEEEEeC---CCHHHHHhhhhhcCCceeecc---------------------------
Confidence 34556789999999999999999999999 446777888888887754322
Q ss_pred hhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCC
Q 017067 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGM 338 (378)
Q Consensus 260 ~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~ 338 (378)
.||.+.- |..|+++++++|++|+||||.. +||.++..+||
T Consensus 92 -------------------------~KP~~~~--------------fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 92 -------------------------KKPFGRA--------------FRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred -------------------------cCccHHH--------------HHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 1433332 9999999999999999999995 89999999999
Q ss_pred CEEEEcCC
Q 017067 339 PCVVMRSS 346 (378)
Q Consensus 339 ~~i~v~~~ 346 (378)
+||.|..-
T Consensus 133 ~tIlV~Pl 140 (175)
T COG2179 133 RTILVEPL 140 (175)
T ss_pred EEEEEEEe
Confidence 99998643
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.7e-10 Score=103.11 Aligned_cols=102 Identities=17% Similarity=0.091 Sum_probs=80.2
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhh
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~ 271 (378)
-|+.|+++|++++|+||. ....++..++.+|+.++|+..
T Consensus 42 ~~~~L~~~Gi~laIiT~k---~~~~~~~~l~~lgi~~~f~~~-------------------------------------- 80 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSK---KSGAVRHRAEELKIKRFHEGI-------------------------------------- 80 (169)
T ss_pred HHHHHHHCCCEEEEEECC---CcHHHHHHHHHCCCcEEEecC--------------------------------------
Confidence 467888999999999994 468999999999999888531
Q ss_pred HHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC
Q 017067 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA 351 (378)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 351 (378)
||.|+. |+.+++++++++++|++|||+.+|+.+++.+|+..+.-+.. ..
T Consensus 81 --------------kpkp~~--------------~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~---~~ 129 (169)
T TIGR02726 81 --------------KKKTEP--------------YAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAV---AD 129 (169)
T ss_pred --------------CCCHHH--------------HHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCch---HH
Confidence 333333 99999999999999999999999999999999777664433 22
Q ss_pred CCCCCcEEecCCCc
Q 017067 352 EFPSANAVMDGFGG 365 (378)
Q Consensus 352 ~l~~ad~vi~~l~e 365 (378)
-...|++|+..-.+
T Consensus 130 lk~~A~~I~~~~~~ 143 (169)
T TIGR02726 130 VKEAAAYVTTARGG 143 (169)
T ss_pred HHHhCCEEcCCCCC
Confidence 22347888765444
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.5e-10 Score=98.60 Aligned_cols=89 Identities=7% Similarity=-0.056 Sum_probs=68.6
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhC-------ccccchheeechhhHHHhhhhcccccccccc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-------SERISKIKIVGNEEVERSLYGQFVLGKGISS 256 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lg-------i~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~ 256 (378)
+++||+.++|+.|+++|++++|+||++ ....+...++.++ +.++|+..+ +++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~--~~~~~~~~l~~~~~~~~i~~l~~~f~~~~-~~~------------------ 87 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYND--DPHVAYELLKIFEDFGIIFPLAEYFDPLT-IGY------------------ 87 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCC--CHHHHHHHHHhccccccchhhHhhhhhhh-hcC------------------
Confidence 378999999999999999999999952 4677778888887 566665421 110
Q ss_pred CcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcC--CCCCcEEEEeCCHhHHHHHH
Q 017067 257 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQSGVAGAQ 334 (378)
Q Consensus 257 ~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lg--v~p~~~i~VGDs~~Di~aA~ 334 (378)
.+|.|++ |..+++++| +.|++|+||||+..|+...+
T Consensus 88 ----------------------------~~pkp~~--------------~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 88 ----------------------------WLPKSPR--------------LVEIALKLNGVLKPKSILFVDDRPDNNEEVD 125 (128)
T ss_pred ----------------------------CCcHHHH--------------HHHHHHHhcCCCCcceEEEECCCHhHHHHHH
Confidence 0222222 899999999 99999999999999987765
Q ss_pred H
Q 017067 335 R 335 (378)
Q Consensus 335 ~ 335 (378)
.
T Consensus 126 ~ 126 (128)
T TIGR01681 126 Y 126 (128)
T ss_pred h
Confidence 4
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.2e-09 Score=99.23 Aligned_cols=110 Identities=13% Similarity=0.039 Sum_probs=71.6
Q ss_pred CCCCCHHHHHH-HHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 184 PLRPGVEDFVD-DAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 184 ~~~pgv~~lL~-~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.++||+.++|+ .++++|++++|+|| +++..++.+.+..++....+ +++.+ ++. ..++.+.|.. +
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSa---s~~~~~~~ia~~~~~~~~~~--~i~t~-le~-~~gg~~~g~~---c----- 158 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITG---SPQPLVEAVYFDSNFIHRLN--LIASQ-IER-GNGGWVLPLR---C----- 158 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcC---CcHHHHHHHHHhccccccCc--EEEEE-eEE-eCCceEcCcc---C-----
Confidence 58999999996 78889999999999 45788889988866643322 23322 111 0111111110 0
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
....| .....+.+|.+...+.+.|||.+|+.+...+|-+.++
T Consensus 159 ----------------------------------~g~~K----v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 159 ----------------------------------LGHEK----VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred ----------------------------------CChHH----HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEE
Confidence 00011 2333444465677899999999999999999988877
Q ss_pred EcCC
Q 017067 343 MRSS 346 (378)
Q Consensus 343 v~~~ 346 (378)
-+++
T Consensus 201 np~~ 204 (210)
T TIGR01545 201 SKRG 204 (210)
T ss_pred Ccch
Confidence 5544
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.07 E-value=5e-10 Score=99.78 Aligned_cols=103 Identities=17% Similarity=0.274 Sum_probs=69.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc----------ccchheeechhhHHHhhhhcccccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE----------RISKIKIVGNEEVERSLYGQFVLGK 252 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~----------~~f~~~iv~~~~~~~~~~~~~v~g~ 252 (378)
+.++|+|.++|+.|+++|+++++.|-. .....++..|+.+++. ++|+..-+..
T Consensus 44 v~lypdv~~iL~~L~~~gv~lavASRt--~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~--------------- 106 (169)
T PF12689_consen 44 VSLYPDVPEILQELKERGVKLAVASRT--DEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYP--------------- 106 (169)
T ss_dssp E---TTHHHHHHHHHHCT--EEEEE----S-HHHHHHHHHHTT-C----------CCECEEEESS---------------
T ss_pred EEeCcCHHHHHHHHHHCCCEEEEEECC--CChHHHHHHHHhcCCCccccccccchhhcchhheec---------------
Confidence 569999999999999999999999954 3468999999999999 5554421111
Q ss_pred ccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHH
Q 017067 253 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG 332 (378)
Q Consensus 253 ~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~a 332 (378)
+ ..... |+...+..|++.++++||+|-.+++..
T Consensus 107 ----g----------------------------------------sK~~H---f~~i~~~tgI~y~eMlFFDDe~~N~~~ 139 (169)
T PF12689_consen 107 ----G----------------------------------------SKTTH---FRRIHRKTGIPYEEMLFFDDESRNIEV 139 (169)
T ss_dssp ----S-----------------------------------------HHHH---HHHHHHHH---GGGEEEEES-HHHHHH
T ss_pred ----C----------------------------------------chHHH---HHHHHHhcCCChhHEEEecCchhccee
Confidence 0 11111 888899999999999999999999999
Q ss_pred HHHcCCCEEEEcCCCCC
Q 017067 333 AQRIGMPCVVMRSSLTS 349 (378)
Q Consensus 333 A~~aG~~~i~v~~~~~~ 349 (378)
....|+.+|.|.+|.+.
T Consensus 140 v~~lGV~~v~v~~Glt~ 156 (169)
T PF12689_consen 140 VSKLGVTCVLVPDGLTW 156 (169)
T ss_dssp HHTTT-EEEE-SSS--H
T ss_pred eEecCcEEEEeCCCCCH
Confidence 99999999999987543
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.8e-10 Score=116.91 Aligned_cols=95 Identities=16% Similarity=0.227 Sum_probs=71.9
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCC---------chHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKS---------GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 255 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~---------~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~ 255 (378)
++|||.+.|+.|+++|++++|+||...- ....+..+++.+|+. |+. +++.+..
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdv-iia~~~~--------------- 259 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQV-FIAIGAG--------------- 259 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEE-EEeCCCC---------------
Confidence 6899999999999999999999997520 012467788888875 543 2322110
Q ss_pred cCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcC----CCCCcEEEEeCCHhHHH
Q 017067 256 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGSQSGVA 331 (378)
Q Consensus 256 ~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lg----v~p~~~i~VGDs~~Di~ 331 (378)
.+|||+|++ +..+++.++ +++++|+||||+..|++
T Consensus 260 ---------------------------~~RKP~pGm--------------~~~a~~~~~~~~~Id~~~S~~VGDaagr~~ 298 (526)
T TIGR01663 260 ---------------------------FYRKPLTGM--------------WDHLKEEANDGTEIQEDDCFFVGDAAGRPA 298 (526)
T ss_pred ---------------------------CCCCCCHHH--------------HHHHHHhcCcccCCCHHHeEEeCCcccchH
Confidence 145888887 899999984 89999999999998888
Q ss_pred HHHHcCC
Q 017067 332 GAQRIGM 338 (378)
Q Consensus 332 aA~~aG~ 338 (378)
++.++|.
T Consensus 299 ~g~~ag~ 305 (526)
T TIGR01663 299 NGKAAGK 305 (526)
T ss_pred HHHhcCC
Confidence 7776664
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.05 E-value=9.3e-10 Score=98.76 Aligned_cols=130 Identities=15% Similarity=0.166 Sum_probs=90.9
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCC---CCc---------hHHHHHHHHHhCccccchheeechhhHHHhhhhccccc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYG---KSG---------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 251 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~---~~~---------~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g 251 (378)
.+.||+.+.+..|++.|++++++||.+ +++ .......++..|. .-
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv-----------------------~i 87 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV-----------------------KI 87 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC-----------------------cc
Confidence 488999999999999999999999965 100 0112222222232 11
Q ss_pred cccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHH
Q 017067 252 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 331 (378)
Q Consensus 252 ~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~ 331 (378)
+.+..++. . -++.+.||||.|.+ |..+++++++++++.++|||...|++
T Consensus 88 d~i~~Cph----------~-------p~~~c~cRKP~~gm--------------~~~~~~~~~iD~~~s~~VGD~~~Dlq 136 (181)
T COG0241 88 DGILYCPH----------H-------PEDNCDCRKPKPGM--------------LLSALKEYNIDLSRSYVVGDRLTDLQ 136 (181)
T ss_pred ceEEECCC----------C-------CCCCCcccCCChHH--------------HHHHHHHhCCCccceEEecCcHHHHH
Confidence 22222211 0 01225688999888 99999999999999999999999999
Q ss_pred HHHHcCCCEEEEcCCCCCCCCCC-CCcEEecCCCcch
Q 017067 332 GAQRIGMPCVVMRSSLTSRAEFP-SANAVMDGFGGAD 367 (378)
Q Consensus 332 aA~~aG~~~i~v~~~~~~~~~l~-~ad~vi~~l~e~~ 367 (378)
+|.++|+..+.+.++........ .++.+++++.++.
T Consensus 137 ~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (181)
T COG0241 137 AAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFA 173 (181)
T ss_pred HHHHCCCCceEEEcCcccccccccccccccccHHHHH
Confidence 99999999888877654432222 3578888888776
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=6.3e-10 Score=100.54 Aligned_cols=99 Identities=12% Similarity=0.109 Sum_probs=75.4
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhh
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~ 271 (378)
.|+.|+++|++++|+||. ....+..+++.+|+..+|.. .
T Consensus 56 ~i~~L~~~Gi~v~I~T~~---~~~~v~~~l~~lgl~~~f~g----~---------------------------------- 94 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGR---KSKLVEDRMTTLGITHLYQG----Q---------------------------------- 94 (183)
T ss_pred HHHHHHHCCCEEEEEeCC---CcHHHHHHHHHcCCceeecC----C----------------------------------
Confidence 567778899999999994 46888999999999877642 0
Q ss_pred HHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC
Q 017067 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA 351 (378)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 351 (378)
++ + ++ .++.+++++|++|++|+||||+.+|+.+++++|+.++ +.+. ...
T Consensus 95 --------------~~---------k--~~---~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~-v~~~--~~~ 143 (183)
T PRK09484 95 --------------SN---------K--LI---AFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA-VADA--HPL 143 (183)
T ss_pred --------------Cc---------H--HH---HHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe-cCCh--hHH
Confidence 00 0 11 2899999999999999999999999999999999954 4322 112
Q ss_pred CCCCCcEEecC
Q 017067 352 EFPSANAVMDG 362 (378)
Q Consensus 352 ~l~~ad~vi~~ 362 (378)
....|+++++.
T Consensus 144 ~~~~a~~v~~~ 154 (183)
T PRK09484 144 LLPRADYVTRI 154 (183)
T ss_pred HHHhCCEEecC
Confidence 22347899974
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.1e-09 Score=98.32 Aligned_cols=41 Identities=12% Similarity=0.282 Sum_probs=38.2
Q ss_pred HHHHHHHcCCCCCcE-EEEeCCH-hHHHHHHHcCCCEEEEcCC
Q 017067 306 LRAGAEYAEKPVRNC-FLIAGSQ-SGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~-i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (378)
|+.++++++++++++ +||||+. +||.+|+++||++++|.++
T Consensus 194 ~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 194 YRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred HHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 999999999999887 9999998 8999999999999999764
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.9e-09 Score=93.37 Aligned_cols=98 Identities=14% Similarity=0.221 Sum_probs=63.0
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCch-----------HHHHHHHHHhCccccchheeechhhHHHhhhhccccccc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGD-----------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 253 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~-----------~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~ 253 (378)
..|+|.+.|++|.+.|+.++|+||.+.-.. .....+++.+++.-. ++.....
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~~----~~~a~~~------------- 92 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPIQ----VYAAPHK------------- 92 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-EE----EEECGCS-------------
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCceE----EEecCCC-------------
Confidence 456899999999999999999999852111 222334444444311 1111000
Q ss_pred cccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCC----CCCcEEEEeCC---
Q 017067 254 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK----PVRNCFLIAGS--- 326 (378)
Q Consensus 254 v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv----~p~~~i~VGDs--- 326 (378)
-.+|||.++| +..+++.+.. +.++++||||.
T Consensus 93 ----------------------------d~~RKP~~GM--------------~~~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 93 ----------------------------DPCRKPNPGM--------------WEFALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp ----------------------------STTSTTSSHH--------------HHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred ----------------------------CCCCCCchhH--------------HHHHHHhccccccccccceEEEeccCCC
Confidence 0267999988 8988988874 89999999996
Q ss_pred --------HhHHHHHHHcCCCEE
Q 017067 327 --------QSGVAGAQRIGMPCV 341 (378)
Q Consensus 327 --------~~Di~aA~~aG~~~i 341 (378)
..|.+-|.++|++..
T Consensus 131 ~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 131 SKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp TB-S--S--HHHHHHHHHT--EE
T ss_pred CCcccccChhHHHHHHHcCCccc
Confidence 689999999998753
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.6e-08 Score=93.24 Aligned_cols=128 Identities=16% Similarity=0.189 Sum_probs=80.8
Q ss_pred CCCCCCCHHHHHHHH--HHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechh-hHHHh-hhhccccccccccC
Q 017067 182 DAPLRPGVEDFVDDA--YNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE-EVERS-LYGQFVLGKGISSG 257 (378)
Q Consensus 182 ~~~~~pgv~~lL~~L--k~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~-~~~~~-~~~~~v~g~~v~~~ 257 (378)
.+++.||+.++++.+ +..|+.+.|+|. +...+++.+++..|+...|.. |+++. ..... .+ .+...-...+
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSD---aNs~fI~~iL~~~gl~~~f~~-I~TNpa~~~~~G~l--~v~pyh~h~C 142 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISD---ANSFFIETILEHHGLRDCFSE-IFTNPACFDADGRL--RVRPYHSHGC 142 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeC---CcHhHHHHHHHhCCCccccce-EEeCCceecCCceE--EEeCccCCCC
Confidence 478999999999999 457999999999 457999999999999998876 56653 11110 00 0000000111
Q ss_pred cchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcC
Q 017067 258 VDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 337 (378)
Q Consensus 258 ~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG 337 (378)
.. =.+.+ =+-.++..|..-..+-|+.-++++||||+.||+=.+.+.+
T Consensus 143 ~~---------------------------C~~Nm------CK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~ 189 (234)
T PF06888_consen 143 SL---------------------------CPPNM------CKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLR 189 (234)
T ss_pred Cc---------------------------CCCcc------chHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccC
Confidence 00 00001 0122322233333335788899999999999998888877
Q ss_pred CC-EEEEcCCCC
Q 017067 338 MP-CVVMRSSLT 348 (378)
Q Consensus 338 ~~-~i~v~~~~~ 348 (378)
-. .++.+.++.
T Consensus 190 ~~D~v~~R~~~~ 201 (234)
T PF06888_consen 190 PRDVVFPRKGYP 201 (234)
T ss_pred CCCEEecCCCCh
Confidence 54 555555543
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.2e-08 Score=94.53 Aligned_cols=60 Identities=17% Similarity=0.088 Sum_probs=47.0
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
+++..++++|++++++++|||+.||+.|++.+|+.++. ++....-...|++|..+..+-+
T Consensus 161 al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam---~Na~~~vk~~a~~v~~~n~~~G 220 (230)
T PRK01158 161 GLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAV---ANADEELKEAADYVTEKSYGEG 220 (230)
T ss_pred HHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEe---cCccHHHHHhcceEecCCCcCh
Confidence 38899999999999999999999999999999976543 3233333345899998776654
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.9e-09 Score=101.37 Aligned_cols=40 Identities=13% Similarity=0.312 Sum_probs=36.5
Q ss_pred HHHHHHHcCCC-CCcEEEEeCC-HhHHHHHHHcCCCEEEEcC
Q 017067 306 LRAGAEYAEKP-VRNCFLIAGS-QSGVAGAQRIGMPCVVMRS 345 (378)
Q Consensus 306 ~~~a~~~lgv~-p~~~i~VGDs-~~Di~aA~~aG~~~i~v~~ 345 (378)
|+.+++++|+. +++|+||||+ .+||.+|+++||.+++|.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 201 FHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred HHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence 99999999975 6799999999 6999999999999999864
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.7e-08 Score=91.86 Aligned_cols=49 Identities=14% Similarity=0.274 Sum_probs=40.0
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f 230 (378)
..+++||+.++|+.|+++|++++++||........+...++.+|+...+
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~ 164 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD 164 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC
Confidence 4668999999999999999999999997643345566788889987644
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.80 E-value=8.8e-09 Score=95.04 Aligned_cols=58 Identities=12% Similarity=0.005 Sum_probs=45.6
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcc
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~ 366 (378)
++.+++++|++++++++|||+.||+.|++.+|+.+++ ++....-...|++|..+-.+-
T Consensus 154 i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam---~Na~~~~k~~A~~vt~~~~~~ 211 (225)
T TIGR01482 154 VKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAV---ANAQPELKEWADYVTESPYGE 211 (225)
T ss_pred HHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEc---CChhHHHHHhcCeecCCCCCC
Confidence 8889999999999999999999999999999965433 333333345589988766553
|
catalyze the same reaction as SPP. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.5e-08 Score=96.49 Aligned_cols=82 Identities=11% Similarity=0.070 Sum_probs=65.7
Q ss_pred HHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCC---
Q 017067 278 AEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEF--- 353 (378)
Q Consensus 278 ~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l--- 353 (378)
|.+.++.|+| .-++||++.. +....++++++|++|+||||+. +||.-++++|+++++|.++.+..++.
T Consensus 210 av~~~t~R~P-~v~GKP~~~m-------~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~ 281 (306)
T KOG2882|consen 210 AVKFATGRQP-IVLGKPSTFM-------FEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEA 281 (306)
T ss_pred HHHHHhcCCC-eecCCCCHHH-------HHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhc
Confidence 4577788888 5677776654 7778999999999999999997 59999999999999999998754322
Q ss_pred -----CCCcEEecCCCcch
Q 017067 354 -----PSANAVMDGFGGAD 367 (378)
Q Consensus 354 -----~~ad~vi~~l~e~~ 367 (378)
..+|+.++.++++-
T Consensus 282 ~~~~~~~PDyy~~~l~d~~ 300 (306)
T KOG2882|consen 282 QGDNKMVPDYYADSLGDLL 300 (306)
T ss_pred ccccCCCCchHHhhHHHHh
Confidence 12588888887764
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.79 E-value=9.5e-08 Score=87.19 Aligned_cols=52 Identities=21% Similarity=0.369 Sum_probs=45.7
Q ss_pred CCCCCCCHHHHHHHHHHCCC-cEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 182 DAPLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~-~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
.+|..||+.++|+.+++.|. .+.|+|.++ ..++..+++.+|+.++|.. |+++
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaN---sfFIe~~Lea~~~~d~F~~-IfTN 134 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDAN---SFFIEEILEAAGIHDLFSE-IFTN 134 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecCc---hhHHHHHHHHccHHHHHHH-HhcC
Confidence 47899999999999999985 999999954 6999999999999999985 5554
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.5e-08 Score=99.39 Aligned_cols=90 Identities=13% Similarity=0.085 Sum_probs=75.0
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH----hCccccchheeechhhHHHhhhhccccccccccCcch
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK----LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~----lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~ 260 (378)
++||+.++|+.|+++|++++|+|| +....+..+++. +++.++|.... .+
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~---n~~~~a~~~l~~~~~~~~~~~~f~~~~-~~----------------------- 84 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASK---NDEDDAKKVFERRKDFILQAEDFDARS-IN----------------------- 84 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHhCccccCcHHHeeEEE-Ee-----------------------
Confidence 588999999999999999999999 456888999998 88888887632 11
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCC
Q 017067 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 261 ~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 339 (378)
.||.|+. ++.+++.+|+.+++++||||+..|+.++++++-.
T Consensus 85 ------------------------~~pk~~~--------------i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 85 ------------------------WGPKSES--------------LRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred ------------------------cCchHHH--------------HHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 0333333 8999999999999999999999999999998754
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.1e-08 Score=105.02 Aligned_cols=113 Identities=15% Similarity=0.212 Sum_probs=86.6
Q ss_pred CCCCCCHHHHHHHHHHCCC-cEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~-~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
.+++||+.++|++|+++|+ +++++|| .....++.+++.+|++++|....
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTg---d~~~~a~~i~~~lgi~~~f~~~~--------------------------- 410 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTG---DRRAVAERVARELGIDEVHAELL--------------------------- 410 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcC---CCHHHHHHHHHHcCChhhhhccC---------------------------
Confidence 4689999999999999999 9999999 55799999999999988775310
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
|+++ ...+++++...++++||||+.||+.++++|| +
T Consensus 411 ----------------------------------p~~K-------~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~---v 446 (536)
T TIGR01512 411 ----------------------------------PEDK-------LEIVKELREKYGPVAMVGDGINDAPALAAAD---V 446 (536)
T ss_pred ----------------------------------cHHH-------HHHHHHHHhcCCEEEEEeCCHHHHHHHHhCC---E
Confidence 1111 1235555666789999999999999999999 4
Q ss_pred EEcCCC-CCCCCCCCCcEEe--cCCCcchHH
Q 017067 342 VMRSSL-TSRAEFPSANAVM--DGFGGADLT 369 (378)
Q Consensus 342 ~v~~~~-~~~~~l~~ad~vi--~~l~e~~~~ 369 (378)
.+..+. ........||.++ +++.++...
T Consensus 447 gia~g~~~~~~~~~~ad~vl~~~~l~~l~~~ 477 (536)
T TIGR01512 447 GIAMGASGSDVAIETADVVLLNDDLSRLPQA 477 (536)
T ss_pred EEEeCCCccHHHHHhCCEEEECCCHHHHHHH
Confidence 665553 3333445689999 888887643
|
. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.6e-07 Score=88.41 Aligned_cols=71 Identities=17% Similarity=0.151 Sum_probs=49.6
Q ss_pred HHHHHHHcCCCC-CcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCC-C-cEEe--cCCC--cchHHHHHHhhc
Q 017067 306 LRAGAEYAEKPV-RNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPS-A-NAVM--DGFG--GADLTISKLRHS 376 (378)
Q Consensus 306 ~~~a~~~lgv~p-~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~-a-d~vi--~~l~--e~~~~~~~l~~~ 376 (378)
++.+++++|+++ +++++|||+.||+.|++.+|+.++.-+......+.+.. | +.|. ++-+ ++...+.+++.|
T Consensus 195 l~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~~ 272 (273)
T PRK00192 195 VRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLLSK 272 (273)
T ss_pred HHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHHhh
Confidence 788899999999 99999999999999999999766654433233322334 3 4666 4433 454456665544
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.1e-08 Score=105.55 Aligned_cols=113 Identities=16% Similarity=0.162 Sum_probs=83.7
Q ss_pred CCCCCCHHHHHHHHHHCC-CcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G-~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
.+++||+.++|+.|+++| ++++++|| .....++.+++.+|+.++|... ..
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTg---d~~~~a~~i~~~lgi~~~f~~~--~p------------------------ 433 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTG---DNRSAAEAVAAELGIDEVHAEL--LP------------------------ 433 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeC---CCHHHHHHHHHHhCCCeeeccC--CH------------------------
Confidence 568999999999999999 99999999 4568899999999998877541 01
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
+.+. ..+++++..+++|+||||+.||+.++++|| +
T Consensus 434 -----------------------------------~~K~-------~~v~~l~~~~~~v~~vGDg~nD~~al~~A~---v 468 (556)
T TIGR01525 434 -----------------------------------EDKL-------AIVKELQEEGGVVAMVGDGINDAPALAAAD---V 468 (556)
T ss_pred -----------------------------------HHHH-------HHHHHHHHcCCEEEEEECChhHHHHHhhCC---E
Confidence 1111 123344446789999999999999999999 5
Q ss_pred EEcCCCCCCCCCCCCcEEec--CCCcchHH
Q 017067 342 VMRSSLTSRAEFPSANAVMD--GFGGADLT 369 (378)
Q Consensus 342 ~v~~~~~~~~~l~~ad~vi~--~l~e~~~~ 369 (378)
.+..+...+.....||+++. ++..+...
T Consensus 469 gia~g~~~~~~~~~Ad~vi~~~~~~~l~~~ 498 (556)
T TIGR01525 469 GIAMGAGSDVAIEAADIVLLNDDLSSLPTA 498 (556)
T ss_pred eEEeCCCCHHHHHhCCEEEeCCCHHHHHHH
Confidence 55555433334456899998 45555433
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.74 E-value=7.8e-08 Score=86.09 Aligned_cols=41 Identities=22% Similarity=0.530 Sum_probs=36.3
Q ss_pred CCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc
Q 017067 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (378)
Q Consensus 187 pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f 230 (378)
|++.++|+.++++|++++|+|+ ++...++.+++.+|+...+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~---~~~~~i~~~~~~~~i~~~~ 132 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSG---SPDEIIEPIAERLGIDDDN 132 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEE---EEHHHHHHHHHHTTSSEGG
T ss_pred hhHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCCceE
Confidence 5666999999999999999999 6789999999999998743
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=2e-09 Score=102.37 Aligned_cols=60 Identities=12% Similarity=0.005 Sum_probs=48.0
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
+++..++++|++++++++|||+.||+.|.+.+|.. +..++....-...|++|..+..+-+
T Consensus 200 al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~---vAm~NA~~~vK~~A~~vt~~n~~dG 259 (270)
T PRK10513 200 GVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVG---VAMGNAIPSVKEVAQFVTKSNLEDG 259 (270)
T ss_pred HHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCce---EEecCccHHHHHhcCeeccCCCcch
Confidence 48999999999999999999999999999999964 3334444444556899998766543
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.6e-09 Score=101.98 Aligned_cols=58 Identities=9% Similarity=0.020 Sum_probs=44.0
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcE--EecCCCc
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANA--VMDGFGG 365 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~--vi~~l~e 365 (378)
+++..++++|++++++++|||+.||+.|.+.+|.. +..++...+-...|++ |+.+..+
T Consensus 192 al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~---vAm~Na~~~vK~~A~~~~v~~~n~e 251 (272)
T PRK15126 192 ALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRG---FIMGNAMPQLRAELPHLPVIGHCRN 251 (272)
T ss_pred HHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCc---eeccCChHHHHHhCCCCeecCCCcc
Confidence 48999999999999999999999999999999954 3334333333344664 7766555
|
|
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=98.71 E-value=6e-08 Score=95.57 Aligned_cols=130 Identities=11% Similarity=0.048 Sum_probs=85.4
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHh-C-------ccccchheeechhhHHHhhhhcccccccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-G-------SERISKIKIVGNEEVERSLYGQFVLGKGI 254 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~l-g-------i~~~f~~~iv~~~~~~~~~~~~~v~g~~v 254 (378)
+...||+.++|+.|+++|++++|+||+ ....++.+++.+ | +.++|+..+ +..... +.|+.-.....|
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS---~~~yt~~im~~l~g~~~~~~~w~~yFD~II-t~a~KP-~FF~~~~pf~~v 257 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNS---DYDYTDKGMKYLLGPFLGEHDWRDYFDVVI-VDARKP-GFFTEGRPFRQV 257 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHhhCCcccccchHhhCcEEE-eCCCCC-cccCCCCceEEE
Confidence 557999999999999999999999995 468899999996 7 899999744 432222 233321111111
Q ss_pred ccCcchhhhHHHHHHhhHHHHHHHHHHHhhhcccccc-CCCCcch-hHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHH
Q 017067 255 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDI-DTSSPES-LDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVA 331 (378)
Q Consensus 255 ~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i-~kp~p~~-~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~ 331 (378)
....+ .+ |+.... .+| .+. ..+- .....+.+|+.++++++|||+. .||.
T Consensus 258 ~~~~g-~~-----------------------~~~~~~~l~~-g~vY~gGn---~~~~~~~l~~~~~~vlYvGD~i~~Di~ 309 (343)
T TIGR02244 258 DVETG-SL-----------------------KWGEVDGLEP-GKVYSGGS---LKQFHELLKWRGKEVLYFGDHIYGDLL 309 (343)
T ss_pred eCCCC-cc-----------------------cCCccccccC-CCeEeCCC---HHHHHHHHCCCCCcEEEECCcchHHHH
Confidence 11000 00 000000 000 000 0011 6677899999999999999996 6999
Q ss_pred HHH-HcCCCEEEEcC
Q 017067 332 GAQ-RIGMPCVVMRS 345 (378)
Q Consensus 332 aA~-~aG~~~i~v~~ 345 (378)
+++ .+||.+|+|-.
T Consensus 310 ~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 310 RSKKKRGWRTAAIIP 324 (343)
T ss_pred hhHHhcCcEEEEEch
Confidence 998 99999998764
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.68 E-value=6.3e-09 Score=98.78 Aligned_cols=60 Identities=12% Similarity=0.021 Sum_probs=47.0
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
|++..++++|++++++++|||+.||+.|.+.+| ..|..++..+.-...|++|..+-.+-+
T Consensus 193 al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag---~gvam~Na~~~~k~~A~~vt~~n~~~G 252 (264)
T COG0561 193 ALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAG---LGVAMGNADEELKELADYVTTSNDEDG 252 (264)
T ss_pred HHHHHHHHhCCCHHHeEEeCCccccHHHHHhcC---eeeeccCCCHHHHhhCCcccCCccchH
Confidence 488999999999999999999999999999999 445555554444455777767666654
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.66 E-value=3.8e-08 Score=94.11 Aligned_cols=61 Identities=8% Similarity=-0.064 Sum_probs=45.5
Q ss_pred HHHHHHHHcCC---CCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC----CCCCCcEEecCCCcc
Q 017067 305 ALRAGAEYAEK---PVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA----EFPSANAVMDGFGGA 366 (378)
Q Consensus 305 a~~~a~~~lgv---~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~----~l~~ad~vi~~l~e~ 366 (378)
|++..++++|+ ++++++.|||+.||+.|.+.+|..+++= +...... ....++++.+..++-
T Consensus 191 al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~ 258 (271)
T PRK03669 191 AANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPE 258 (271)
T ss_pred HHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcH
Confidence 48999999999 9999999999999999999999544332 1211111 223478899888853
|
|
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.66 E-value=9.8e-07 Score=78.40 Aligned_cols=59 Identities=10% Similarity=0.062 Sum_probs=45.6
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCC
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFG 364 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~ 364 (378)
|...+...|++|.+.+|+.|.+.-+.||+.+||.++.+..+....-.-..-..++++|.
T Consensus 166 Y~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~~~~~~~~sf~ 224 (229)
T COG4229 166 YAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDGQGFLVYKSFE 224 (229)
T ss_pred HHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeeecCCCCCCCCCcCceeeechh
Confidence 89999999999999999999999999999999999987655332211112235666654
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.3e-08 Score=103.86 Aligned_cols=60 Identities=7% Similarity=-0.054 Sum_probs=48.4
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
+++..++++|++++++++|||+.||+.|.+.+|. .|..++....-...|++|..+..+-+
T Consensus 511 ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~---gVAMgNA~eeVK~~Ad~VT~sNdEDG 570 (580)
T PLN02887 511 GVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASL---GVALSNGAEKTKAVADVIGVSNDEDG 570 (580)
T ss_pred HHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCC---EEEeCCCCHHHHHhCCEEeCCCCcCH
Confidence 4899999999999999999999999999999995 44445444444556899998766643
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.3e-07 Score=85.71 Aligned_cols=63 Identities=19% Similarity=0.266 Sum_probs=53.1
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHh-HHHHHHHcCCCEEEEcCCCCCC--CCCC--CCcEEecCCCcchH
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQS-GVAGAQRIGMPCVVMRSSLTSR--AEFP--SANAVMDGFGGADL 368 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~-Di~aA~~aG~~~i~v~~~~~~~--~~l~--~ad~vi~~l~e~~~ 368 (378)
|+.+++.+|++|++++||||-.+ |+-+|.++||+.|.|.++--.. ++.+ .+|.++++|.|..+
T Consensus 187 Fe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd 254 (262)
T KOG3040|consen 187 FESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVD 254 (262)
T ss_pred HHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHH
Confidence 89999999999999999999876 8999999999999999885443 2222 36899999988644
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.6e-07 Score=86.96 Aligned_cols=93 Identities=10% Similarity=0.168 Sum_probs=71.6
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc-cchheeechhhHHHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~-~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
..++||+.++|+.|+++|++++++||+.+. .......++.+|+.. .|+. +++++++...
T Consensus 23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~~~-~~~~~~~L~~~gl~~~~~~~-Ii~s~~~~~~------------------ 82 (242)
T TIGR01459 23 NHTYPGAVQNLNKIIAQGKPVYFVSNSPRN-IFSLHKTLKSLGINADLPEM-IISSGEIAVQ------------------ 82 (242)
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCCC-hHHHHHHHHHCCCCccccce-EEccHHHHHH------------------
Confidence 458999999999999999999999997642 222236889999987 8876 5555443221
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCC
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 338 (378)
.+..++++++++|++|++|||+..|++....+|.
T Consensus 83 -------------------------------------------~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 83 -------------------------------------------MILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred -------------------------------------------HHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 1566678889999999999999999987766554
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.2e-07 Score=86.62 Aligned_cols=40 Identities=8% Similarity=0.061 Sum_probs=38.7
Q ss_pred HHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCC
Q 017067 307 RAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 307 ~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (378)
+.++++.|++|++|+||+|...++++|++.||+++.+.++
T Consensus 168 e~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 168 KQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred HHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 9999999999999999999999999999999999999866
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.1e-08 Score=97.05 Aligned_cols=59 Identities=14% Similarity=0.160 Sum_probs=45.0
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCc--EEecCCCcc
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSAN--AVMDGFGGA 366 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad--~vi~~l~e~ 366 (378)
+++..++++|++++++++|||+.||+.|.+.+|...+. ++....-...|+ +|+.+..|-
T Consensus 194 al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm---~NA~~~vK~~A~~~~v~~~n~ed 254 (266)
T PRK10976 194 ALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM---GNAHQRLKDLLPELEVIGSNADD 254 (266)
T ss_pred HHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee---cCCcHHHHHhCCCCeecccCchH
Confidence 48999999999999999999999999999999965444 333333333455 777766553
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.3e-07 Score=87.00 Aligned_cols=58 Identities=14% Similarity=0.039 Sum_probs=45.4
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcc
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~ 366 (378)
++.+++++|++++++++|||+.||+.|++.+|+.++. ++..+.-...|++|.++-.+-
T Consensus 152 i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam---~na~~~~k~~A~~v~~~~~~~ 209 (215)
T TIGR01487 152 VEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAV---ANADDQLKEIADYVTSNPYGE 209 (215)
T ss_pred HHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEc---CCccHHHHHhCCEEcCCCCCc
Confidence 8899999999999999999999999999999966444 333333334489998765554
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.59 E-value=1e-07 Score=100.40 Aligned_cols=112 Identities=13% Similarity=0.246 Sum_probs=80.9
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.+++||+.++|++|+++|++++++|| .....++.+.+.+|++ +|...
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSg---d~~~~a~~ia~~lgi~-~~~~~----------------------------- 450 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTG---DNRKTAKAVAKELGIN-VRAEV----------------------------- 450 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcC---CCHHHHHHHHHHcCCc-EEccC-----------------------------
Confidence 45899999999999999999999999 4578999999999995 22110
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
+ |+++.+. +++++.++++|+||||+.||+.++++||+ .
T Consensus 451 -----------------------~---------p~~K~~~-------v~~l~~~~~~v~~VGDg~nD~~al~~A~v---g 488 (562)
T TIGR01511 451 -----------------------L---------PDDKAAL-------IKELQEKGRVVAMVGDGINDAPALAQADV---G 488 (562)
T ss_pred -----------------------C---------hHHHHHH-------HHHHHHcCCEEEEEeCCCccHHHHhhCCE---E
Confidence 0 1111111 33333367899999999999999999995 4
Q ss_pred EcCCCCCCCCCCCCcEEec--CCCcchHH
Q 017067 343 MRSSLTSRAEFPSANAVMD--GFGGADLT 369 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~vi~--~l~e~~~~ 369 (378)
+..+...+.....||+++. ++.++...
T Consensus 489 ia~g~g~~~a~~~Advvl~~~~l~~l~~~ 517 (562)
T TIGR01511 489 IAIGAGTDVAIEAADVVLMRNDLNDVATA 517 (562)
T ss_pred EEeCCcCHHHHhhCCEEEeCCCHHHHHHH
Confidence 4445444444556899984 77666544
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.3e-06 Score=77.79 Aligned_cols=55 Identities=33% Similarity=0.526 Sum_probs=44.8
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhC-ccccchheeechhh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEE 239 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lg-i~~~f~~~iv~~~~ 239 (378)
.+.+.||.+++++.+++++++++|+|+ +...++..+++..+ -++...+.+++++.
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSs---Gm~~fI~~lfe~ivgke~i~~idi~sn~~ 126 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSS---GMDPFIYPLFEGIVGKERIYCIDIVSNND 126 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeC---CCchHHHHHHHhhccccceeeeEEeecCc
Confidence 467999999999999999999999999 66799999998755 45555565666653
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.2e-07 Score=87.61 Aligned_cols=37 Identities=5% Similarity=-0.031 Sum_probs=34.1
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
++.+++++|++++++++|||+.||+.|.+.+|..+++
T Consensus 184 l~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 184 ANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred HHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 7888999999999999999999999999999976653
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.46 E-value=6.7e-08 Score=91.32 Aligned_cols=59 Identities=14% Similarity=0.057 Sum_probs=46.7
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcc
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~ 366 (378)
+++.+++++|++++++++|||+.||+.|++.+|+.+++- +....-...|++++++..+-
T Consensus 192 ~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~---na~~~~k~~a~~~~~~n~~d 250 (256)
T TIGR00099 192 ALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG---NADEELKALADYVTDSNNED 250 (256)
T ss_pred HHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec---CchHHHHHhCCEEecCCCCc
Confidence 489999999999999999999999999999999875552 22223334588998876654
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=5.9e-07 Score=98.92 Aligned_cols=114 Identities=12% Similarity=0.171 Sum_probs=84.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
-+++||+.+.|++|+++|++++++|+ .....++.+.+.+|+.++|... .
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tg---d~~~~a~~ia~~lgi~~~~~~~--~-------------------------- 697 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTG---DNPTTANAIAKEAGIDEVIAGV--L-------------------------- 697 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCCEEEeCC--C--------------------------
Confidence 36899999999999999999999999 4468888999999998765431 0
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
|+.+ ..+++.++..+++++||||+.||+.++++||+ .
T Consensus 698 ---------------------------------p~~K-------~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agv---g 734 (834)
T PRK10671 698 ---------------------------------PDGK-------AEAIKRLQSQGRQVAMVGDGINDAPALAQADV---G 734 (834)
T ss_pred ---------------------------------HHHH-------HHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCe---e
Confidence 1111 12355666778999999999999999999996 5
Q ss_pred EcCCCCCCCCCCCCcEEe--cCCCcchHHH
Q 017067 343 MRSSLTSRAEFPSANAVM--DGFGGADLTI 370 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~vi--~~l~e~~~~~ 370 (378)
+..+......+..||.++ +++.++...+
T Consensus 735 ia~g~g~~~a~~~ad~vl~~~~~~~i~~~i 764 (834)
T PRK10671 735 IAMGGGSDVAIETAAITLMRHSLMGVADAL 764 (834)
T ss_pred EEecCCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 555555555556666544 6677665544
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.32 E-value=1e-06 Score=84.54 Aligned_cols=52 Identities=15% Similarity=0.199 Sum_probs=43.9
Q ss_pred CCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 187 pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
||+.++|++|+++|++++|+||+. ...+...++.+|+..+|+. +++++++.+
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~---Re~v~~~L~~lGLd~YFdv-IIs~Gdv~~ 200 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGD---RDHVVESMRKVKLDRYFDI-IISGGHKAE 200 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCC---HHHHHHHHHHcCCCcccCE-EEECCcccc
Confidence 788999999999999999999954 5788899999999999987 555555544
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.2e-06 Score=96.92 Aligned_cols=139 Identities=21% Similarity=0.281 Sum_probs=90.1
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
+++||+.+.|+.|+++|+++.++|+ .....+..+.+.+|+...++. ++++++..... ++++
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTG---D~~~tA~~ia~~~Gi~~~~~~-~v~g~~l~~~~--------------~~~l- 588 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITG---DSQETAVSIARRLGMPSKTSQ-SVSGEKLDAMD--------------DQQL- 588 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCCCCCc-eeEhHHhHhCC--------------HHHH-
Confidence 6899999999999999999999999 557899999999999876654 34444443210 0000
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
.++.+++.. +..+.|+.+-.+ -.++++. .+.+.|+||+.||+.|.++|+ |++
T Consensus 589 -----------~~~~~~~~V-------far~~P~~K~~i----v~~lq~~---g~~v~mvGDGvND~pAl~~Ad---VGi 640 (884)
T TIGR01522 589 -----------SQIVPKVAV-------FARASPEHKMKI----VKALQKR---GDVVAMTGDGVNDAPALKLAD---IGV 640 (884)
T ss_pred -----------HHHhhcCeE-------EEECCHHHHHHH----HHHHHHC---CCEEEEECCCcccHHHHHhCC---eeE
Confidence 001111000 111223333333 2233443 478999999999999999999 566
Q ss_pred cCCC-CCCCCCCCCcEEe--cCCCcchHH
Q 017067 344 RSSL-TSRAEFPSANAVM--DGFGGADLT 369 (378)
Q Consensus 344 ~~~~-~~~~~l~~ad~vi--~~l~e~~~~ 369 (378)
..+. ..+.....||+++ ++|..+...
T Consensus 641 a~g~~g~~va~~aaDivl~dd~~~~i~~~ 669 (884)
T TIGR01522 641 AMGQTGTDVAKEAADMILTDDDFATILSA 669 (884)
T ss_pred ecCCCcCHHHHHhcCEEEcCCCHHHHHHH
Confidence 6653 2333335689999 668877554
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.4e-06 Score=77.53 Aligned_cols=47 Identities=11% Similarity=0.221 Sum_probs=34.8
Q ss_pred EEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHH
Q 017067 321 FLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTI 370 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~ 370 (378)
++|+|++.++..+...|+++|++..+++.... --..+.+..|+...+
T Consensus 139 vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~---~~~Rv~~W~ei~~~i 185 (191)
T PF06941_consen 139 VLIDDRPHNLEQFANAGIPVILFDQPYNRDES---NFPRVNNWEEIEDLI 185 (191)
T ss_dssp EEEESSSHHHSS-SSESSEEEEE--GGGTT-----TSEEE-STTSHHHHH
T ss_pred EEecCChHHHHhccCCCceEEEEcCCCCCCCC---CCccCCCHHHHHHHH
Confidence 79999999999999999999999998777553 457888888875544
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.26 E-value=3.6e-07 Score=81.03 Aligned_cols=98 Identities=15% Similarity=0.147 Sum_probs=76.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc-cchheeechhhHHHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~-~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
+..+||+.++|+.|.+. +.++|.|++ ....++.+++.+++.. +|+..++..++...
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~---~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~------------------- 97 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTAS---LEEYADPVLDILDRGGKVISRRLYRESCVFT------------------- 97 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCC---cHHHHHHHHHHHCcCCCEEeEEEEccccEEe-------------------
Confidence 45899999999999988 999999994 5789999999999876 77764432221100
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
||. |.+.+..+|.++++||+|||++.++.++.++|+++.
T Consensus 98 ------------------------~~~-----------------~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 98 ------------------------NGK-----------------YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred ------------------------CCC-----------------EEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 111 345578889999999999999999999999997766
Q ss_pred EEc
Q 017067 342 VMR 344 (378)
Q Consensus 342 ~v~ 344 (378)
...
T Consensus 137 ~f~ 139 (162)
T TIGR02251 137 SWF 139 (162)
T ss_pred CCC
Confidence 554
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=3.4e-06 Score=91.69 Aligned_cols=108 Identities=15% Similarity=0.202 Sum_probs=77.7
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
+++||+.+.|++|+++|++++++|+ .....++.+.+.+|+..++.. .
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTG---d~~~~a~~ia~~lgi~~~~~~---~--------------------------- 614 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTG---DNPRAAAAIAGELGIDFRAGL---L--------------------------- 614 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCeecCC---C---------------------------
Confidence 6899999999999999999999999 457999999999999643321 0
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
|+.+..+ .++++ .+.+++||||+.||..++++|+ |.+
T Consensus 615 --------------------------------p~~K~~~-------v~~l~-~~~~v~mvGDgiNDapAl~~A~---vgi 651 (741)
T PRK11033 615 --------------------------------PEDKVKA-------VTELN-QHAPLAMVGDGINDAPAMKAAS---IGI 651 (741)
T ss_pred --------------------------------HHHHHHH-------HHHHh-cCCCEEEEECCHHhHHHHHhCC---eeE
Confidence 1111111 22333 3468999999999999999999 555
Q ss_pred cCCCCCCCCCCCCcEEe--cCCCcch
Q 017067 344 RSSLTSRAEFPSANAVM--DGFGGAD 367 (378)
Q Consensus 344 ~~~~~~~~~l~~ad~vi--~~l~e~~ 367 (378)
..+.......+.||.++ +++.++.
T Consensus 652 a~g~~~~~a~~~adivl~~~~l~~l~ 677 (741)
T PRK11033 652 AMGSGTDVALETADAALTHNRLRGLA 677 (741)
T ss_pred EecCCCHHHHHhCCEEEecCCHHHHH
Confidence 55544544455678766 4555554
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.1e-05 Score=75.64 Aligned_cols=50 Identities=22% Similarity=0.301 Sum_probs=41.1
Q ss_pred cCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc
Q 017067 180 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (378)
Q Consensus 180 ~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~ 229 (378)
....++.||+.+|++.++++|+.|.++||............|...|+...
T Consensus 111 ~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~ 160 (229)
T PF03767_consen 111 SGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW 160 (229)
T ss_dssp CTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB
T ss_pred cccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc
Confidence 33457899999999999999999999999776556677788888896543
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.8e-05 Score=70.44 Aligned_cols=96 Identities=13% Similarity=0.186 Sum_probs=67.3
Q ss_pred CCCCHHHHHHHHHHCCCc--EEEEeCCCCC----chHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCc
Q 017067 185 LRPGVEDFVDDAYNEGIP--LIVLTAYGKS----GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~--v~ivTn~~~~----~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~ 258 (378)
+.|.+.+.++++++.+.. +.|+||+.-. ....++.+-+.+|+.-+...
T Consensus 60 i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl~h~-------------------------- 113 (168)
T PF09419_consen 60 IPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVLRHR-------------------------- 113 (168)
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEEEeC--------------------------
Confidence 556778899999998764 9999996300 13556667777775421100
Q ss_pred chhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCC-----CCCcEEEEeCCH-hHHHH
Q 017067 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK-----PVRNCFLIAGSQ-SGVAG 332 (378)
Q Consensus 259 ~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv-----~p~~~i~VGDs~-~Di~a 332 (378)
..|| .. +..++++++. .|+++++|||.. +||.+
T Consensus 114 -------------------------~kKP---------~~-------~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~ 152 (168)
T PF09419_consen 114 -------------------------AKKP---------GC-------FREILKYFKCQKVVTSPSEIAVIGDRLFTDVLM 152 (168)
T ss_pred -------------------------CCCC---------cc-------HHHHHHHHhhccCCCCchhEEEEcchHHHHHHH
Confidence 0143 11 4455556543 599999999995 79999
Q ss_pred HHHcCCCEEEEcCCC
Q 017067 333 AQRIGMPCVVMRSSL 347 (378)
Q Consensus 333 A~~aG~~~i~v~~~~ 347 (378)
|...|+.+|++.+|.
T Consensus 153 gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 153 GNRMGSYTILVTDGV 167 (168)
T ss_pred hhccCceEEEEecCc
Confidence 999999999999874
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.05 E-value=3.4e-06 Score=78.68 Aligned_cols=37 Identities=5% Similarity=0.047 Sum_probs=31.6
Q ss_pred HHHHHHHcCC--CCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 306 LRAGAEYAEK--PVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 306 ~~~a~~~lgv--~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
.+..++.+++ .+.+|++|||+.||+.|.+.+|+.+++
T Consensus 186 l~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v 224 (225)
T TIGR02461 186 IKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLV 224 (225)
T ss_pred HHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEec
Confidence 6777788866 677999999999999999999987653
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.7e-05 Score=66.95 Aligned_cols=120 Identities=8% Similarity=0.093 Sum_probs=87.9
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
-.+++.|.+.|++|++. +.++|.|+-. ........+-.|+...- +....+
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr---~gsl~~lae~~gi~~~r---v~a~a~----------------------- 78 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDR---KGSLVQLAEFVGIPVER---VFAGAD----------------------- 78 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCc---chHHHHHHHHcCCceee---eecccC-----------------------
Confidence 45899999999999999 9999999843 45666777777764322 111111
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
++.. ...++.++-+-+.|+||||+.||+.+.++|.+..+.
T Consensus 79 ---------------------------------~e~K-------~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~t 118 (152)
T COG4087 79 ---------------------------------PEMK-------AKIIRELKKRYEKVVMVGNGANDILALREADLGICT 118 (152)
T ss_pred ---------------------------------HHHH-------HHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEE
Confidence 1111 223556665668999999999999999999999888
Q ss_pred EcCCCCCCCCCCCCcEEecCCCcchHHHHH
Q 017067 343 MRSSLTSRAEFPSANAVMDGFGGADLTISK 372 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~ 372 (378)
+......+.-+..||.|+.+..|+-+.+.+
T Consensus 119 iq~e~v~~r~l~~ADvvik~i~e~ldl~~~ 148 (152)
T COG4087 119 IQQEGVPERLLLTADVVLKEIAEILDLLKD 148 (152)
T ss_pred eccCCcchHHHhhchhhhhhHHHHHHHhhc
Confidence 887656666677899999999998665443
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=3.4e-05 Score=82.60 Aligned_cols=111 Identities=11% Similarity=0.089 Sum_probs=81.9
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
+++|++.+.+++||+.|+++.++|+ .....+..+.+.+|+.++|... .
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTG---Dn~~TA~aIA~elGI~~v~A~~--~--------------------------- 488 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTG---DNELTAATIAKEAGVDRFVAEC--K--------------------------- 488 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCceEEcCC--C---------------------------
Confidence 6899999999999999999999999 5578999999999998765331 1
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
|+.+-. +-..+++-| +-+.|+||+.||..+.++|. |++
T Consensus 489 --------------------------------PedK~~----iV~~lQ~~G---~~VaMtGDGvNDAPALa~AD---VGI 526 (673)
T PRK14010 489 --------------------------------PEDKIN----VIREEQAKG---HIVAMTGDGTNDAPALAEAN---VGL 526 (673)
T ss_pred --------------------------------HHHHHH----HHHHHHhCC---CEEEEECCChhhHHHHHhCC---EEE
Confidence 111111 222333333 56889999999999999999 677
Q ss_pred cCCCCCCCCCCCCcEEe--cCCCcchH
Q 017067 344 RSSLTSRAEFPSANAVM--DGFGGADL 368 (378)
Q Consensus 344 ~~~~~~~~~l~~ad~vi--~~l~e~~~ 368 (378)
..+...+...+.||+|+ ++|..+..
T Consensus 527 AMgsGTdvAkeAADiVLldd~ls~Iv~ 553 (673)
T PRK14010 527 AMNSGTMSAKEAANLIDLDSNPTKLME 553 (673)
T ss_pred EeCCCCHHHHHhCCEEEcCCCHHHHHH
Confidence 76655555666789988 44555433
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00066 Score=70.52 Aligned_cols=104 Identities=17% Similarity=0.180 Sum_probs=63.3
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH-hCccccchheeechh-hH-HHhhhhccccccccccCcchh
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNE-EV-ERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~-lgi~~~f~~~iv~~~-~~-~~~~~~~~v~g~~v~~~~~~~ 261 (378)
+.|.+.+. ++++|. .+|+|. +++..++.+.+. +|++.. ++.+ ++ ..+.|++.+.|.+.-.|.
T Consensus 111 l~~~a~~~---~~~~g~-~vvVSA---Sp~~~Vepfa~~~LGid~V-----IgTeLev~~~G~~TG~i~g~~~c~Ge--- 175 (497)
T PLN02177 111 VHPETWRV---FNSFGK-RYIITA---SPRIMVEPFVKTFLGADKV-----LGTELEVSKSGRATGFMKKPGVLVGD--- 175 (497)
T ss_pred cCHHHHHH---HHhCCC-EEEEEC---CcHHHHHHHHHHcCCCCEE-----EecccEECcCCEEeeeecCCCCCccH---
Confidence 45555554 456774 499999 567899999976 898863 3332 22 234455554443211110
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
+. ...+.+.+|.+... +..|||.+|..+...++-..+
T Consensus 176 ---------------------------------------~K---v~rl~~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~ 212 (497)
T PLN02177 176 ---------------------------------------HK---RDAVLKEFGDALPD-LGLGDRETDHDFMSICKEGYM 212 (497)
T ss_pred ---------------------------------------HH---HHHHHHHhCCCCce-EEEECCccHHHHHHhCCccEE
Confidence 00 23333556644334 899999999999999997766
Q ss_pred EEcCC
Q 017067 342 VMRSS 346 (378)
Q Consensus 342 ~v~~~ 346 (378)
+-.+.
T Consensus 213 V~~~~ 217 (497)
T PLN02177 213 VPRTK 217 (497)
T ss_pred eCCCC
Confidence 65533
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.92 E-value=2.3e-05 Score=68.30 Aligned_cols=101 Identities=14% Similarity=0.181 Sum_probs=76.8
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhh
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~ 271 (378)
-|+.|.+.|++++|+|+. ..+.++.-.+.||+.+++... ++
T Consensus 43 Gik~l~~~Gi~vAIITGr---~s~ive~Ra~~LGI~~~~qG~----~d-------------------------------- 83 (170)
T COG1778 43 GIKLLLKSGIKVAIITGR---DSPIVEKRAKDLGIKHLYQGI----SD-------------------------------- 83 (170)
T ss_pred HHHHHHHcCCeEEEEeCC---CCHHHHHHHHHcCCceeeech----Hh--------------------------------
Confidence 467788889999999994 468999999999999988652 00
Q ss_pred HHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC
Q 017067 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA 351 (378)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 351 (378)
..++|...++++++.+++|.||||-.+|+.+.+.+|+++..-... .
T Consensus 84 ------------------------------K~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh----~ 129 (170)
T COG1778 84 ------------------------------KLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAH----P 129 (170)
T ss_pred ------------------------------HHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccC----H
Confidence 013489999999999999999999999999999999886653221 2
Q ss_pred CC-CCCcEEecCCCc
Q 017067 352 EF-PSANAVMDGFGG 365 (378)
Q Consensus 352 ~l-~~ad~vi~~l~e 365 (378)
.+ +.+++|...=++
T Consensus 130 ~v~~~a~~Vt~~~GG 144 (170)
T COG1778 130 LLKQRADYVTSKKGG 144 (170)
T ss_pred HHHHhhHhhhhccCc
Confidence 22 235666554443
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.91 E-value=4.4e-05 Score=84.99 Aligned_cols=138 Identities=12% Similarity=0.225 Sum_probs=82.5
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccch---heeechhhHHHhhhhccccccccccCcch
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK---IKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~---~~iv~~~~~~~~~~~~~v~g~~v~~~~~~ 260 (378)
+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+...-. ...+.+.+...- .++
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTG---D~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~--------------~~~ 599 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITG---DNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEM--------------GPA 599 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecC---CCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhC--------------CHH
Confidence 6899999999999999999999999 44688899999999854211 012222222110 000
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 261 ~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
+......++.. +..-.|+.+-.+ .+.++-..+.+.|+||+.||+.|.+.|++
T Consensus 600 ------------~~~~~~~~~~v-------~ar~~P~~K~~i-------V~~lq~~g~~va~iGDG~ND~~alk~AdV-- 651 (917)
T TIGR01116 600 ------------KQRAACRSAVL-------FSRVEPSHKSEL-------VELLQEQGEIVAMTGDGVNDAPALKKADI-- 651 (917)
T ss_pred ------------HHHHhhhcCeE-------EEecCHHHHHHH-------HHHHHhcCCeEEEecCCcchHHHHHhCCe--
Confidence 00000000000 000112222222 33344446788899999999999999995
Q ss_pred EEEcCCCCCCCCCCCCcEEecC--CCcch
Q 017067 341 VVMRSSLTSRAEFPSANAVMDG--FGGAD 367 (378)
Q Consensus 341 i~v~~~~~~~~~l~~ad~vi~~--l~e~~ 367 (378)
++..+...+.....||+|+.+ |..+.
T Consensus 652 -Gia~g~g~~~ak~aAD~vl~dd~f~~i~ 679 (917)
T TIGR01116 652 -GIAMGSGTEVAKEASDMVLADDNFATIV 679 (917)
T ss_pred -eEECCCCcHHHHHhcCeEEccCCHHHHH
Confidence 555443334444568999977 55543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=2.7e-05 Score=75.05 Aligned_cols=48 Identities=21% Similarity=0.188 Sum_probs=41.0
Q ss_pred CCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 187 pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
|++.++|++|+++|++++|+||+ ....+...++.+|+..+|+..+.++
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg---~Re~v~~~Le~lgL~~yFDvII~~g 198 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYG---NREHVVHSLKETKLEGYFDIIICGG 198 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCC---ChHHHHHHHHHcCCCccccEEEECC
Confidence 67889999999999999999994 4588899999999999998744333
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00013 Score=68.12 Aligned_cols=50 Identities=14% Similarity=0.094 Sum_probs=38.7
Q ss_pred cCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc
Q 017067 180 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (378)
Q Consensus 180 ~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~ 229 (378)
....++.|++.++++.|+++|+++.++||........+...|...|+..+
T Consensus 116 ~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~ 165 (229)
T TIGR01675 116 KGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW 165 (229)
T ss_pred cCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc
Confidence 34568999999999999999999999999653223336677777887654
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00013 Score=77.49 Aligned_cols=48 Identities=13% Similarity=0.117 Sum_probs=38.5
Q ss_pred HHHHHHHHcCCCCCcEEEE--eCCHhHHHHHHHcCCCEEEEcCCCCCCCCC
Q 017067 305 ALRAGAEYAEKPVRNCFLI--AGSQSGVAGAQRIGMPCVVMRSSLTSRAEF 353 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~V--GDs~~Di~aA~~aG~~~i~v~~~~~~~~~l 353 (378)
|++..++.+|++.++++.| ||+.||+.|.+.+|..++. ..+......+
T Consensus 617 AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM-~~~~~~~~~l 666 (694)
T PRK14502 617 AIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV-QRPGNKWHKM 666 (694)
T ss_pred HHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE-cCCCCCCCcc
Confidence 5899999999999999999 9999999999999986555 4444433333
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00022 Score=62.91 Aligned_cols=39 Identities=28% Similarity=0.381 Sum_probs=28.4
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK 223 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~ 223 (378)
..|++.++++.++++|++++++|+...+.....+..++.
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 458899999999999999999999542222222466665
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.84 E-value=6.9e-05 Score=80.64 Aligned_cols=113 Identities=16% Similarity=0.241 Sum_probs=83.7
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
-+++|+..+.|++|+++|+++.++|+ .....++.+.+.+|+++++... .
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTG---Dn~~~A~~iA~~lGId~v~Ael--l-------------------------- 584 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTG---DNRRTAEAIAKELGIDEVRAEL--L-------------------------- 584 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcChHhheccC--C--------------------------
Confidence 35899999999999999999999999 5579999999999998776441 1
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
|+.+-++ .+++.-.-..+.||||+.||-.+...|. |+
T Consensus 585 ---------------------------------PedK~~~-------V~~l~~~g~~VamVGDGINDAPALA~Ad---VG 621 (713)
T COG2217 585 ---------------------------------PEDKAEI-------VRELQAEGRKVAMVGDGINDAPALAAAD---VG 621 (713)
T ss_pred ---------------------------------cHHHHHH-------HHHHHhcCCEEEEEeCCchhHHHHhhcC---ee
Confidence 1111111 2222222368999999999999999998 77
Q ss_pred EcCCCCCCCCCCCCcEEec--CCCcchHH
Q 017067 343 MRSSLTSRAEFPSANAVMD--GFGGADLT 369 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~vi~--~l~e~~~~ 369 (378)
+..+...+-..+.||.|+- +|..+...
T Consensus 622 iAmG~GtDvA~eaADvvL~~~dL~~v~~a 650 (713)
T COG2217 622 IAMGSGTDVAIEAADVVLMRDDLSAVPEA 650 (713)
T ss_pred EeecCCcHHHHHhCCEEEecCCHHHHHHH
Confidence 7777666667778887664 46665543
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=8e-05 Score=79.93 Aligned_cols=111 Identities=14% Similarity=0.115 Sum_probs=80.8
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
+++||+.+.+++|++.|+++.++|+ .....+..+.+.+|+++++... .
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTG---Dn~~TA~aIA~elGId~v~A~~--~--------------------------- 492 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITG---DNPLTAAAIAAEAGVDDFLAEA--T--------------------------- 492 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCcEEEccC--C---------------------------
Confidence 5799999999999999999999999 5579999999999998755321 1
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
|+.+-. +-..+++-| +-+.|+||+.||..|.++|. |++
T Consensus 493 --------------------------------PedK~~----iV~~lQ~~G---~~VaMtGDGvNDAPALa~AD---VGI 530 (679)
T PRK01122 493 --------------------------------PEDKLA----LIRQEQAEG---RLVAMTGDGTNDAPALAQAD---VGV 530 (679)
T ss_pred --------------------------------HHHHHH----HHHHHHHcC---CeEEEECCCcchHHHHHhCC---EeE
Confidence 111111 222333333 45889999999999999999 666
Q ss_pred cCCCCCCCCCCCCcEEec--CCCcchH
Q 017067 344 RSSLTSRAEFPSANAVMD--GFGGADL 368 (378)
Q Consensus 344 ~~~~~~~~~l~~ad~vi~--~l~e~~~ 368 (378)
..+...+...+.||+|+- +|..+..
T Consensus 531 AMgsGTdvAkeAADiVLldd~~s~Iv~ 557 (679)
T PRK01122 531 AMNSGTQAAKEAGNMVDLDSNPTKLIE 557 (679)
T ss_pred EeCCCCHHHHHhCCEEEeCCCHHHHHH
Confidence 666555555667898874 4544443
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00022 Score=68.03 Aligned_cols=49 Identities=18% Similarity=0.251 Sum_probs=38.6
Q ss_pred cCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 180 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 180 ~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
....++.|++.++.+.++++|+++.++||............|.+.|+..
T Consensus 141 ~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~ 189 (275)
T TIGR01680 141 KGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT 189 (275)
T ss_pred cccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC
Confidence 3457899999999999999999999999965333455666677777754
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.75 E-value=7e-05 Score=76.15 Aligned_cols=43 Identities=14% Similarity=-0.028 Sum_probs=36.9
Q ss_pred HHHHHHHHc---CCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCC
Q 017067 305 ALRAGAEYA---EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSL 347 (378)
Q Consensus 305 a~~~a~~~l---gv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~ 347 (378)
|++..++++ |++++++++|||+.||+.|.+.+|...|.+.+..
T Consensus 179 Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~ 224 (413)
T PLN02382 179 ALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQ 224 (413)
T ss_pred HHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCc
Confidence 378888998 9999999999999999999999997666665553
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00012 Score=78.45 Aligned_cols=105 Identities=13% Similarity=0.154 Sum_probs=74.6
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
+++||+.+.+++|+++|+++.++|+ .....+..+.+.+|+++++... .
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTG---D~~~ta~~iA~~lGI~~v~a~~--~--------------------------- 493 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITG---DNRLTAAAIAAEAGVDDFIAEA--T--------------------------- 493 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCEEEcCC--C---------------------------
Confidence 6899999999999999999999999 5578999999999998755320 0
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
|+.+-.+ ++. ++.- ...+.|+||+.||..+.++|++ .+
T Consensus 494 --------------------------------PedK~~~---v~~-lq~~---g~~VamvGDG~NDapAL~~Adv---Gi 531 (675)
T TIGR01497 494 --------------------------------PEDKIAL---IRQ-EQAE---GKLVAMTGDGTNDAPALAQADV---GV 531 (675)
T ss_pred --------------------------------HHHHHHH---HHH-HHHc---CCeEEEECCCcchHHHHHhCCE---eE
Confidence 1111111 222 2222 3469999999999999999994 44
Q ss_pred cCCCCCCCCCCCCcEEecC
Q 017067 344 RSSLTSRAEFPSANAVMDG 362 (378)
Q Consensus 344 ~~~~~~~~~l~~ad~vi~~ 362 (378)
..+...+...+.+|+|+-+
T Consensus 532 Am~~gt~~akeaadivLld 550 (675)
T TIGR01497 532 AMNSGTQAAKEAANMVDLD 550 (675)
T ss_pred EeCCCCHHHHHhCCEEECC
Confidence 4443344444557887743
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00015 Score=80.71 Aligned_cols=137 Identities=13% Similarity=0.149 Sum_probs=85.7
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+.. ..++++.+...- -++++.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~aIA~~lGI~~---~~vi~G~el~~~--------------~~~el~ 609 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTG---DNPIVTAKICREVGLEP---GEPLLGTEIEAM--------------DDAALA 609 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCC---CCccchHhhhhC--------------CHHHHH
Confidence 6899999999999999999999999 55789999999999952 124444444320 000111
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
+ +.+++ . -+..-.|+.+-.+| .++++.| +-+.|+||+.||..|.++|. |++
T Consensus 610 ~------------~v~~~------~-VfAr~sPe~K~~iV----~~Lq~~G---~vVamtGDGvNDaPALk~AD---VGI 660 (903)
T PRK15122 610 R------------EVEER------T-VFAKLTPLQKSRVL----KALQANG---HTVGFLGDGINDAPALRDAD---VGI 660 (903)
T ss_pred H------------HhhhC------C-EEEEeCHHHHHHHH----HHHHhCC---CEEEEECCCchhHHHHHhCC---EEE
Confidence 0 00000 0 00001133333333 3334444 56899999999999999999 555
Q ss_pred cCCCCCCCCCCCCcEEe--cCCCcchHH
Q 017067 344 RSSLTSRAEFPSANAVM--DGFGGADLT 369 (378)
Q Consensus 344 ~~~~~~~~~l~~ad~vi--~~l~e~~~~ 369 (378)
..+...+-..+.||.|+ ++|..+...
T Consensus 661 Amg~gtdvAkeaADiVLldd~f~~Iv~a 688 (903)
T PRK15122 661 SVDSGADIAKESADIILLEKSLMVLEEG 688 (903)
T ss_pred EeCcccHHHHHhcCEEEecCChHHHHHH
Confidence 55544444456689988 556655443
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0002 Score=68.01 Aligned_cols=117 Identities=16% Similarity=0.258 Sum_probs=75.8
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc---chheeec-------hhhHHHhhhhccccccc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI---SKIKIVG-------NEEVERSLYGQFVLGKG 253 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~---f~~~iv~-------~~~~~~~~~~~~v~g~~ 253 (378)
..-+.+.++|..|+++|+++..+|...........+.|+.+|++-- |...... ........++++....+
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~ 160 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGG 160 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCC
Confidence 3678999999999999999999999775556666677778887421 1111000 00001111122222111
Q ss_pred cccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHH--
Q 017067 254 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA-- 331 (378)
Q Consensus 254 v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~-- 331 (378)
..+| .++...+.+.|..|+.+|||+|+..++.
T Consensus 161 ~~KG----------------------------------------------~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv 194 (252)
T PF11019_consen 161 QDKG----------------------------------------------EVLKYFLDKINQSPKKIIFIDDNKENLKSV 194 (252)
T ss_pred CccH----------------------------------------------HHHHHHHHHcCCCCCeEEEEeCCHHHHHHH
Confidence 1111 1288899999999999999999998774
Q ss_pred --HHHHcCCCEEEEcCC
Q 017067 332 --GAQRIGMPCVVMRSS 346 (378)
Q Consensus 332 --aA~~aG~~~i~v~~~ 346 (378)
+++..|+..+++.-.
T Consensus 195 ~~a~k~~~I~f~G~~Yt 211 (252)
T PF11019_consen 195 EKACKKSGIDFIGFHYT 211 (252)
T ss_pred HHHHhhCCCcEEEEEEc
Confidence 455678888877543
|
The function is not known. |
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.68 E-value=8.5e-05 Score=62.85 Aligned_cols=49 Identities=18% Similarity=0.082 Sum_probs=42.9
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchhee
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 234 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~i 234 (378)
+.++|.|.+++..+|+.|+.+..+|= +....+-..+..+++..+|...+
T Consensus 40 v~L~~~v~~~l~warnsG~i~~~~sW---N~~~kA~~aLral~~~~yFhy~V 88 (164)
T COG4996 40 VHLFPDVKETLKWARNSGYILGLASW---NFEDKAIKALRALDLLQYFHYIV 88 (164)
T ss_pred EEEcHHHHHHHHHHHhCCcEEEEeec---CchHHHHHHHHHhchhhhEEEEE
Confidence 56899999999999999998888886 56778888999999999999854
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00017 Score=79.93 Aligned_cols=132 Identities=10% Similarity=0.181 Sum_probs=83.1
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhh---hhccccccccccCcch
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSL---YGQFVLGKGISSGVDE 260 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~---~~~~v~g~~v~~~~~~ 260 (378)
+++|++.+.|++|+++|+++.++|+ .....+..+.+.+|+..- .++.+.+..... +...+....+..
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTG---D~~~tA~aIA~~lGI~~~---~v~~g~~l~~~~~~el~~~~~~~~vfA---- 584 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTG---DNEIVTARICQEVGIDAN---DFLLGADIEELSDEELARELRKYHIFA---- 584 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCCC---CeeecHhhhhCCHHHHHHHhhhCeEEE----
Confidence 6899999999999999999999999 557889999999999631 234443332100 000000000100
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 261 ~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
.-.|+.+-.+| .++++.| +.+.|+||+.||..|.+.|.
T Consensus 585 --------------------------------r~~Pe~K~~iV----~~lq~~G---~vVam~GDGvNDapALk~Ad--- 622 (867)
T TIGR01524 585 --------------------------------RLTPMQKSRII----GLLKKAG---HTVGFLGDGINDAPALRKAD--- 622 (867)
T ss_pred --------------------------------ECCHHHHHHHH----HHHHhCC---CEEEEECCCcccHHHHHhCC---
Confidence 01133333332 3344444 46889999999999999999
Q ss_pred EEEcCCCCCCCCCCCCcEEe--cCCCcch
Q 017067 341 VVMRSSLTSRAEFPSANAVM--DGFGGAD 367 (378)
Q Consensus 341 i~v~~~~~~~~~l~~ad~vi--~~l~e~~ 367 (378)
|++..+...+-..+.||.|+ ++|..+.
T Consensus 623 VGIAmg~gtdvAk~aADiVLldd~~~~I~ 651 (867)
T TIGR01524 623 VGISVDTAADIAKEASDIILLEKSLMVLE 651 (867)
T ss_pred EEEEeCCccHHHHHhCCEEEecCChHHHH
Confidence 55555544444456689888 4454443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00019 Score=79.67 Aligned_cols=136 Identities=13% Similarity=0.184 Sum_probs=85.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
-+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+.. ..++++++.+.- .++++
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~~IA~~lGI~~---~~v~~G~el~~l--------------~~~el 608 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTG---DSELVAAKVCHEVGLDA---GEVLIGSDIETL--------------SDDEL 608 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCc---cCceeHHHHHhC--------------CHHHH
Confidence 36899999999999999999999999 55789999999999952 124555554321 01111
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
.+ +.+++- -+..-.|+.+-.+|. ++++.| .-+.|+||+.||..|.++|. |+
T Consensus 609 ~~------------~~~~~~-------VfAr~sPe~K~~IV~----~Lq~~G---~vVam~GDGvNDaPALk~AD---VG 659 (902)
T PRK10517 609 AN------------LAERTT-------LFARLTPMHKERIVT----LLKREG---HVVGFMGDGINDAPALRAAD---IG 659 (902)
T ss_pred HH------------HHhhCc-------EEEEcCHHHHHHHHH----HHHHCC---CEEEEECCCcchHHHHHhCC---EE
Confidence 10 001000 000112333334433 334444 56889999999999999999 56
Q ss_pred EcCCCCCCCCCCCCcEEe--cCCCcch
Q 017067 343 MRSSLTSRAEFPSANAVM--DGFGGAD 367 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~vi--~~l~e~~ 367 (378)
+..+...+-..+.||.|+ ++|..+.
T Consensus 660 IAmg~gtdvAkeaADiVLldd~~~~I~ 686 (902)
T PRK10517 660 ISVDGAVDIAREAADIILLEKSLMVLE 686 (902)
T ss_pred EEeCCcCHHHHHhCCEEEecCChHHHH
Confidence 655544444556689988 4555543
|
|
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0036 Score=57.93 Aligned_cols=62 Identities=11% Similarity=0.133 Sum_probs=48.4
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC-CCCC-CcEEecCCCcch
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA-EFPS-ANAVMDGFGGAD 367 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~-~l~~-ad~vi~~l~e~~ 367 (378)
|....+.+|.++.|.+|+-|-..-..+|+.+|+.+.++..|..... +-.. .=.++.+|..+.
T Consensus 186 y~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l~ 249 (254)
T KOG2630|consen 186 YKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEILE 249 (254)
T ss_pred HHHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhhh
Confidence 8999999999999999999999999999999999888766644332 2111 235777777653
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00025 Score=68.43 Aligned_cols=43 Identities=12% Similarity=0.028 Sum_probs=30.3
Q ss_pred HHHHHHHcCC--CCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCC
Q 017067 306 LRAGAEYAEK--PVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTS 349 (378)
Q Consensus 306 ~~~a~~~lgv--~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~ 349 (378)
.+...+.+.- .+-.+|.+|||+||+.|.+.+...+|+ .++...
T Consensus 213 ~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi-~~~~~~ 257 (302)
T PRK12702 213 VQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL-PSPIAD 257 (302)
T ss_pred HHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe-cCCCCC
Confidence 3444444432 345899999999999999999988766 545443
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00046 Score=75.38 Aligned_cols=139 Identities=15% Similarity=0.180 Sum_probs=81.1
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
+++|++.+.|+.|+++|+++.++|+ .....++.+.+.+|+.+. +++.+++.. |+....-.++
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~~IA~~lGI~~~----~~~~~~l~~--------~~~~~~~~~~--- 503 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTG---DHLAIAKETARRLGLGTN----IYTADVLLK--------GDNRDDLPSG--- 503 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCCC----CcCHHHhcC--------CcchhhCCHH---
Confidence 6899999999999999999999999 557899999999999652 223322211 0000000000
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
+-.++.+++.. +..-.|+.+-.+| .++++.| .-+.|+||+.||..|.++|.+. +
T Consensus 504 ---------~~~~~~~~~~v-------fAr~~Pe~K~~iV----~~lq~~G---~~VamvGDGvNDapAL~~AdVG---I 557 (755)
T TIGR01647 504 ---------ELGEMVEDADG-------FAEVFPEHKYEIV----EILQKRG---HLVGMTGDGVNDAPALKKADVG---I 557 (755)
T ss_pred ---------HHHHHHHhCCE-------EEecCHHHHHHHH----HHHHhcC---CEEEEEcCCcccHHHHHhCCee---E
Confidence 00011111000 0001133333332 3344444 5689999999999999999954 3
Q ss_pred cCCCCCCCCCCCCcEEec--CCCcc
Q 017067 344 RSSLTSRAEFPSANAVMD--GFGGA 366 (378)
Q Consensus 344 ~~~~~~~~~l~~ad~vi~--~l~e~ 366 (378)
..+...+-..+.||.|+- +|..+
T Consensus 558 Am~~gtdvAkeaADivLl~d~l~~I 582 (755)
T TIGR01647 558 AVAGATDAARSAADIVLTEPGLSVI 582 (755)
T ss_pred EecCCcHHHHHhCCEEEEcCChHHH
Confidence 334334444556888773 44444
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00036 Score=78.70 Aligned_cols=140 Identities=14% Similarity=0.195 Sum_probs=83.9
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc---------hheeechhhHHHhhhhccccccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS---------KIKIVGNEEVERSLYGQFVLGKG 253 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f---------~~~iv~~~~~~~~~~~~~v~g~~ 253 (378)
-+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+.... +..++++.+...-
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTG---D~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l---------- 711 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTG---DFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDAL---------- 711 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhc----------
Confidence 36899999999999999999999999 5578899999999995321 1123333333210
Q ss_pred cccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHH
Q 017067 254 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 333 (378)
Q Consensus 254 v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA 333 (378)
.++ +-.++.+.+. -+..-.|+.+-.+| .++++.| ..+.|+||+.||..|.
T Consensus 712 ----~~~------------~l~~~~~~~~-------V~ar~sP~~K~~iV----~~lq~~g---~~Vam~GDGvNDapaL 761 (1053)
T TIGR01523 712 ----SDE------------EVDDLKALCL-------VIARCAPQTKVKMI----EALHRRK---AFCAMTGDGVNDSPSL 761 (1053)
T ss_pred ----CHH------------HHHHHhhcCe-------EEEecCHHHHHHHH----HHHHhcC---CeeEEeCCCcchHHHH
Confidence 000 0001111100 00001133333332 3334443 5688999999999999
Q ss_pred HHcCCCEEEEcCCC-CCCCCCCCCcEEecC--CCcchH
Q 017067 334 QRIGMPCVVMRSSL-TSRAEFPSANAVMDG--FGGADL 368 (378)
Q Consensus 334 ~~aG~~~i~v~~~~-~~~~~l~~ad~vi~~--l~e~~~ 368 (378)
+.|+ |++..+. ..+.....||+|+.+ |..+..
T Consensus 762 k~Ad---VGIAmg~~gt~vak~aADivl~dd~f~~I~~ 796 (1053)
T TIGR01523 762 KMAN---VGIAMGINGSDVAKDASDIVLSDDNFASILN 796 (1053)
T ss_pred HhCC---ccEecCCCccHHHHHhcCEEEecCCHHHHHH
Confidence 9999 5554442 223344568998854 665543
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0005 Score=76.91 Aligned_cols=136 Identities=15% Similarity=0.184 Sum_probs=85.6
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHh---hhhccccccccccCcch
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS---LYGQFVLGKGISSGVDE 260 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~---~~~~~v~g~~v~~~~~~ 260 (378)
+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+..--.. ++.+++.... .+..++.-..|.
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTG---D~~~tA~~iA~~~GI~~~~~~-vi~G~~~~~l~~~el~~~i~~~~Vf----- 649 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTG---DNIDTAKAIARNCGILTFGGL-AMEGKEFRRLVYEEMDPILPKLRVL----- 649 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECC---CChHHHHHHHHHcCCCCCCce-EeeHHHhhhCCHHHHHHHhccCeEE-----
Confidence 6899999999999999999999999 557889999999999642222 4444443210 000000000010
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 261 ~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
++ -.|+.+-.+| .++++.| .-+.|+||+.||..|.++|.
T Consensus 650 ----------------------ar---------~sPe~K~~iV----~~lq~~g---~vVam~GDGvNDapALk~Ad--- 688 (941)
T TIGR01517 650 ----------------------AR---------SSPLDKQLLV----LMLKDMG---EVVAVTGDGTNDAPALKLAD--- 688 (941)
T ss_pred ----------------------EE---------CCHHHHHHHH----HHHHHCC---CEEEEECCCCchHHHHHhCC---
Confidence 00 1133333333 2344444 46899999999999999999
Q ss_pred EEEcCC-CCCCCCCCCCcEEec--CCCcchHH
Q 017067 341 VVMRSS-LTSRAEFPSANAVMD--GFGGADLT 369 (378)
Q Consensus 341 i~v~~~-~~~~~~l~~ad~vi~--~l~e~~~~ 369 (378)
|++..+ ...+...+.||+|+- +|..+...
T Consensus 689 VGIAmg~~gtdvAk~aADivL~dd~f~~I~~~ 720 (941)
T TIGR01517 689 VGFSMGISGTEVAKEASDIILLDDNFASIVRA 720 (941)
T ss_pred cceecCCCccHHHHHhCCEEEecCCHHHHHHH
Confidence 555555 334445566899887 56555433
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0019 Score=56.88 Aligned_cols=40 Identities=20% Similarity=0.285 Sum_probs=30.4
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHh
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 224 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~l 224 (378)
.+||+.++.+.++++||++..+|+..-......+..+...
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 6789999999999999999999995432334455555554
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0033 Score=51.27 Aligned_cols=54 Identities=20% Similarity=0.255 Sum_probs=40.0
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
-.++||+.++|+.|+++|.+++++||.+..........++.+|+.-..+. ++++
T Consensus 13 ~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~-i~ts 66 (101)
T PF13344_consen 13 NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDE-IITS 66 (101)
T ss_dssp TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGG-EEEH
T ss_pred CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCE-EECh
Confidence 35899999999999999999999999886665677777899998754444 4444
|
... |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.012 Score=54.69 Aligned_cols=41 Identities=22% Similarity=0.322 Sum_probs=33.6
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCc
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi 226 (378)
.+.+.||+.+.++.|.++ ++-.|+|. ++...++++...+|+
T Consensus 81 sa~lvPgA~etm~~l~~~-~tp~v~ST---SY~qy~~r~a~~ig~ 121 (315)
T COG4030 81 SAKLVPGAEETMATLQER-WTPVVIST---SYTQYLRRTASMIGV 121 (315)
T ss_pred hcccCCChHHHHHHHhcc-CCceEEec---cHHHHHHHHHHhcCC
Confidence 477999999999999988 55566666 457888999999988
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.00086 Score=63.16 Aligned_cols=64 Identities=9% Similarity=-0.053 Sum_probs=53.1
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHc-------CCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHH
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI-------GMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKL 373 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a-------G~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l 373 (378)
++.+++++++.++++++|||+.+|+.+++.+ |..+|.|..+ .....|++++++..++...+..|
T Consensus 172 ~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g----~~~~~A~~~~~~~~~v~~~L~~l 242 (244)
T TIGR00685 172 VKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG----SKKTVAKFHLTGPQQVLEFLGLL 242 (244)
T ss_pred HHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC----CcCCCceEeCCCHHHHHHHHHHH
Confidence 8888999999999999999999999999999 6677777644 22334899999999987766655
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0013 Score=74.10 Aligned_cols=151 Identities=19% Similarity=0.236 Sum_probs=84.3
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhh------------hhcccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSL------------YGQFVL 250 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~------------~~~~v~ 250 (378)
-+++|++.+.|++|+++|+++.++|+ .....+..+.+.+|+..--.. ..+++.... ....+.
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~TG---d~~~ta~~ia~~~gi~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~vi~ 640 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKGVGIISEGNE---TVEDIAARLNIPVSQVNPRDAKACVVH 640 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCCCCcc---chhhhhhhccccccccccccccceEEE
Confidence 36899999999999999999999999 556888999999998432110 001110000 001222
Q ss_pred ccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHH
Q 017067 251 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 330 (378)
Q Consensus 251 g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di 330 (378)
|.....-.++++ .++++++ ...-+..-.|+.+-.+| .++++.| .-+.|+||+.||+
T Consensus 641 G~~l~~l~~~el------------~~~~~~~-----~~~VfaR~sPeqK~~IV----~~lq~~g---~vv~~~GDG~ND~ 696 (997)
T TIGR01106 641 GSDLKDMTSEQL------------DEILKYH-----TEIVFARTSPQQKLIIV----EGCQRQG---AIVAVTGDGVNDS 696 (997)
T ss_pred hHHhhhCCHHHH------------HHHHHhc-----CCEEEEECCHHHHHHHH----HHHHHCC---CEEEEECCCcccH
Confidence 222211111111 1112211 00001111244433443 3345555 3688999999999
Q ss_pred HHHHHcCCCEEEEcCCCC-CCCCCCCCcEEecC--CCcc
Q 017067 331 AGAQRIGMPCVVMRSSLT-SRAEFPSANAVMDG--FGGA 366 (378)
Q Consensus 331 ~aA~~aG~~~i~v~~~~~-~~~~l~~ad~vi~~--l~e~ 366 (378)
.|.+.|. |++..+.. .+.....||+|+-+ |.-+
T Consensus 697 paLk~Ad---VGiamg~~G~~vak~aADivL~dd~f~~I 732 (997)
T TIGR01106 697 PALKKAD---IGVAMGIAGSDVSKQAADMILLDDNFASI 732 (997)
T ss_pred HHHhhCC---cceecCCcccHHHHHhhceEEecCCHHHH
Confidence 9999999 55555532 33334557988776 4444
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.001 Score=58.69 Aligned_cols=52 Identities=17% Similarity=0.268 Sum_probs=43.4
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc-cchheeechh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNE 238 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~-~f~~~iv~~~ 238 (378)
+.++||+.++|+.|++. +.++|+|++ ....+..+++.+++.. +|...+++.+
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~---~~~yA~~vl~~ldp~~~~F~~ri~~rd 109 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMG---TRAYAQAIAKLIDPDGKYFGDRIISRD 109 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCC---cHHHHHHHHHHhCcCCCeeccEEEEec
Confidence 56899999999999965 999999994 4689999999999984 7755455544
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.005 Score=55.00 Aligned_cols=39 Identities=13% Similarity=0.192 Sum_probs=29.6
Q ss_pred CcEEEEeCCHhHHHHHHHcCCCEEEEc-CCCCCCCCCCCC
Q 017067 318 RNCFLIAGSQSGVAGAQRIGMPCVVMR-SSLTSRAEFPSA 356 (378)
Q Consensus 318 ~~~i~VGDs~~Di~aA~~aG~~~i~v~-~~~~~~~~l~~a 356 (378)
.-.|+.|||-+||.+|+++|.+.|-+. -++.....++.|
T Consensus 185 ~~~IhYGDSD~Di~AAkeaG~RgIRilRAaNSTy~PlP~a 224 (237)
T COG3700 185 NIRIHYGDSDNDITAAKEAGARGIRILRAANSTYKPLPQA 224 (237)
T ss_pred CceEEecCCchhhhHHHhcCccceeEEecCCccCCcCccc
Confidence 346999999999999999999988664 344445556654
|
|
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0014 Score=67.16 Aligned_cols=130 Identities=8% Similarity=0.070 Sum_probs=70.4
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHh---------CccccchheeechhhHHHhhhhccccccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---------GSERISKIKIVGNEEVERSLYGQFVLGKG 253 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~l---------gi~~~f~~~iv~~~~~~~~~~~~~v~g~~ 253 (378)
+..-|.+..+|+.||++|-++-++||+. -..+..++..+ .|.++||++|+.+.-. ..|+.-...-.
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~---~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP--~FF~~~~pfr~ 256 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSP---FDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKP--GFFTEGRPFRE 256 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS----HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CC--HHHCT---EEE
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCC---CchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCC--cccCCCCceEE
Confidence 3457899999999999999999999954 57777777743 5788999966655311 23322111111
Q ss_pred cccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCC-cch-hHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHH
Q 017067 254 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSS-PES-LDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGV 330 (378)
Q Consensus 254 v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~-p~~-~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di 330 (378)
|....+. + ++.....+-. .+. ..+- .....+.+|....++++|||+. .||
T Consensus 257 vd~~~g~-l-----------------------~~~~~~~~l~~g~vY~gGn---~~~l~~ll~~~g~~VLY~GDhi~~Di 309 (448)
T PF05761_consen 257 VDTETGK-L-----------------------KWGKYVGPLEKGKVYSGGN---WDQLHKLLGWRGKEVLYFGDHIYGDI 309 (448)
T ss_dssp EETTTSS-E-----------------------ECS---SS--TC-EEEE-----HHHHHHHCT--GGGEEEEESSTTTTH
T ss_pred EECCCCc-c-----------------------ccccccccccCCCEeecCC---HHHHHHHHccCCCeEEEECCchhhhh
Confidence 1100000 0 0000000000 000 1111 5666788899999999999997 598
Q ss_pred HHHHHc-CCCEEEEc
Q 017067 331 AGAQRI-GMPCVVMR 344 (378)
Q Consensus 331 ~aA~~a-G~~~i~v~ 344 (378)
...+.. ||+|+.|=
T Consensus 310 ~~~k~~~gWrT~~Ii 324 (448)
T PF05761_consen 310 LKSKKRHGWRTAAII 324 (448)
T ss_dssp HHHHHHH-SEEEEE-
T ss_pred hhhccccceEEEEEe
Confidence 877777 99999873
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0094 Score=57.25 Aligned_cols=45 Identities=16% Similarity=0.258 Sum_probs=34.7
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~ 229 (378)
++||+.++|++|+++|++++++||.+..........++.+|+...
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~ 63 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGL 63 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 678999999999999999999999653333444456777887544
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0013 Score=74.66 Aligned_cols=43 Identities=21% Similarity=0.171 Sum_probs=37.4
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
-++.|||.+.|+.|+++|+++.++|+ .....+..+....|+..
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTG---D~~~TA~~IA~~~~ii~ 672 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTG---DKVETAINIGYSCRLLS 672 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcC---CcHHHHHHHHHHhCCCC
Confidence 36899999999999999999999999 44678888888888854
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0028 Score=70.76 Aligned_cols=131 Identities=14% Similarity=0.186 Sum_probs=80.5
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccch-heeechhhHHHhh---hhccccccccccCc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK-IKIVGNEEVERSL---YGQFVLGKGISSGV 258 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~-~~iv~~~~~~~~~---~~~~v~g~~v~~~~ 258 (378)
-||+|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+..--. ..++.+.+...-. +...+.-..|.
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTG---D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~Vf--- 619 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITG---DHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVF--- 619 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECC---CCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEE---
Confidence 57999999999999999999999999 55789999999999754432 2234444432210 00011000010
Q ss_pred chhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCC
Q 017067 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (378)
Q Consensus 259 ~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 338 (378)
-.=+|+-+-.+ -.++++.| .-+.|.||+.||+.|.++|.+
T Consensus 620 ---------------------------------ARvsP~qK~~I----V~~lq~~g---~vVamtGDGvNDapALk~ADV 659 (917)
T COG0474 620 ---------------------------------ARVSPEQKARI----VEALQKSG---HVVAMTGDGVNDAPALKAADV 659 (917)
T ss_pred ---------------------------------EEcCHHHHHHH----HHHHHhCC---CEEEEeCCCchhHHHHHhcCc
Confidence 00123333333 33455554 568899999999999999995
Q ss_pred CEEEEcCCCCCCCCCCCCcEEec
Q 017067 339 PCVVMRSSLTSRAEFPSANAVMD 361 (378)
Q Consensus 339 ~~i~v~~~~~~~~~l~~ad~vi~ 361 (378)
.......| .+...+.||+|+-
T Consensus 660 GIamg~~G--tdaak~Aadivl~ 680 (917)
T COG0474 660 GIAMGGEG--TDAAKEAADIVLL 680 (917)
T ss_pred cEEecccH--HHHHHhhcceEee
Confidence 55443322 2233344666553
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.003 Score=68.49 Aligned_cols=113 Identities=18% Similarity=0.247 Sum_probs=76.5
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
-+++|++...+..|+..|++++++|+ .....++.+-+.+|++.-+.. -.
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTG---Dn~~aA~svA~~VGi~~V~ae------v~---------------------- 770 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTG---DNDAAARSVAQQVGIDNVYAE------VL---------------------- 770 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcC---CCHHHHHHHHHhhCcceEEec------cC----------------------
Confidence 35899999999999999999999999 557999999999996653322 00
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
+++|.+ + .+.+.-....+.||||+.||-.+...|.+ +
T Consensus 771 --------P~~K~~-------------------------~-------Ik~lq~~~~~VaMVGDGINDaPALA~AdV---G 807 (951)
T KOG0207|consen 771 --------PEQKAE-------------------------K-------IKEIQKNGGPVAMVGDGINDAPALAQADV---G 807 (951)
T ss_pred --------chhhHH-------------------------H-------HHHHHhcCCcEEEEeCCCCccHHHHhhcc---c
Confidence 011111 1 22222233678999999999888888874 3
Q ss_pred EcCCCCCCCCCCCCcEEe--cCCCcchHH
Q 017067 343 MRSSLTSRAEFPSANAVM--DGFGGADLT 369 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~vi--~~l~e~~~~ 369 (378)
+.-+....-..+.||.|+ ++|.++...
T Consensus 808 Iaig~gs~vAieaADIVLmrn~L~~v~~a 836 (951)
T KOG0207|consen 808 IAIGAGSDVAIEAADIVLMRNDLRDVPFA 836 (951)
T ss_pred eeeccccHHHHhhCCEEEEccchhhhHHH
Confidence 333333445566688655 566665543
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0014 Score=60.16 Aligned_cols=58 Identities=10% Similarity=0.085 Sum_probs=46.4
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCc
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGG 365 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e 365 (378)
+++..++.+|++++++++|||+.||+.|.+.+|..+++ ++....-...|++++.+-.+
T Consensus 190 ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am---~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 190 AIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM---GNATPELKKAADYITPSNND 247 (254)
T ss_dssp HHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE---TTS-HHHHHHSSEEESSGTC
T ss_pred HHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE---cCCCHHHHHhCCEEecCCCC
Confidence 48889999999999999999999999999999955333 43333333458999998888
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.013 Score=54.85 Aligned_cols=49 Identities=10% Similarity=0.198 Sum_probs=37.1
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCc-hHHHHHHHHHhCccccc
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSERIS 230 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~-~~~~~~~l~~lgi~~~f 230 (378)
...+.||+.+++....++|..+..+||..... ......-|+.+|+....
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~ 169 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVL 169 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccc
Confidence 35689999999999999999999999976422 23345566677776543
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0039 Score=67.07 Aligned_cols=134 Identities=13% Similarity=0.211 Sum_probs=81.4
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccch---heeechhhHHHhhhhccccccccccCcc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK---IKIVGNEEVERSLYGQFVLGKGISSGVD 259 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~---~~iv~~~~~~~~~~~~~v~g~~v~~~~~ 259 (378)
-||+|+|.+.++.+++.|++|..+|+ .....+..+.+..|+-..-+ ...+++++.. ++-.
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITG---D~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD-----~ls~--------- 645 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITG---DNKETAEAIAREIGIFSEDEDVSSMALTGSEFD-----DLSD--------- 645 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHhCCCcCCccccccccchhhhh-----cCCH---------
Confidence 47999999999999999999999999 45688999999999743322 2233333221 1110
Q ss_pred hhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCC
Q 017067 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 260 ~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 339 (378)
+.++. ++ +++.. +..-.|+-+-++| .++++.| +=+-|-||+.||--+.+.|.
T Consensus 646 -------------~~~~~---~~--~~~~v-FaR~~P~HK~kIV----eaLq~~g---eivAMTGDGVNDApALK~Ad-- 697 (972)
T KOG0202|consen 646 -------------EELDD---AV--RRVLV-FARAEPQHKLKIV----EALQSRG---EVVAMTGDGVNDAPALKKAD-- 697 (972)
T ss_pred -------------HHHHH---Hh--hcceE-EEecCchhHHHHH----HHHHhcC---CEEEecCCCccchhhhhhcc--
Confidence 00000 00 00000 0001133333442 3344444 56789999999999999999
Q ss_pred EEEEcCC-CCCCCCCCCCcEEecC
Q 017067 340 CVVMRSS-LTSRAEFPSANAVMDG 362 (378)
Q Consensus 340 ~i~v~~~-~~~~~~l~~ad~vi~~ 362 (378)
|+++.| ....-..+.+|+|+.|
T Consensus 698 -IGIAMG~~GTdVaKeAsDMVL~D 720 (972)
T KOG0202|consen 698 -IGIAMGISGTDVAKEASDMVLAD 720 (972)
T ss_pred -cceeecCCccHhhHhhhhcEEec
Confidence 677777 3333344557888754
|
|
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0074 Score=53.37 Aligned_cols=30 Identities=17% Similarity=0.390 Sum_probs=25.6
Q ss_pred EEEeCC-HhHHHHHHHcCCCEEEEcCCCCCC
Q 017067 321 FLIAGS-QSGVAGAQRIGMPCVVMRSSLTSR 350 (378)
Q Consensus 321 i~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~ 350 (378)
++++|+ .|-++.|+.+|++++.+++++...
T Consensus 137 lf~ed~~~na~~iAk~~~~~vilins~ynRk 167 (194)
T COG5663 137 LFFEDSHDNAGQIAKNAGIPVILINSPYNRK 167 (194)
T ss_pred ccccccCchHHHHHHhcCCcEEEecCccccc
Confidence 788998 467888889999999999997664
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0042 Score=58.49 Aligned_cols=44 Identities=9% Similarity=-0.006 Sum_probs=39.1
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCC
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLT 348 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~ 348 (378)
+++..++++|+++++|++|||+.||+.|++.+|..+|.+.+...
T Consensus 171 al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~ 214 (249)
T TIGR01485 171 ALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQE 214 (249)
T ss_pred HHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHH
Confidence 38889999999999999999999999999998888888876643
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.019 Score=65.21 Aligned_cols=43 Identities=19% Similarity=0.359 Sum_probs=38.4
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
-+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+..
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTG---D~~~TA~~iA~~~gii~ 697 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITG---DNPLTAVHVARECGIVN 697 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCC
Confidence 36999999999999999999999999 55788889999999953
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.022 Score=59.26 Aligned_cols=40 Identities=28% Similarity=0.514 Sum_probs=36.2
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi 226 (378)
+++|++.+.++.|++.|+++.++|+ .....+..+.+.+|+
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltG---D~~~~a~~ia~~lgi 386 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTG---DNVLTAKAIAKELGI 386 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCc
Confidence 6899999999999999999999999 456888888888886
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.011 Score=67.43 Aligned_cols=42 Identities=24% Similarity=0.239 Sum_probs=35.9
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~ 227 (378)
-++++|+.+.|+.|+++|+++.++|+ .....+..+....|+-
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTG---D~~~tAi~IA~s~~Ll 766 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTG---DKQETAISIGYSSKLL 766 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHhCCC
Confidence 36999999999999999999999999 4457777888777774
|
|
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.062 Score=50.47 Aligned_cols=48 Identities=17% Similarity=0.101 Sum_probs=41.0
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCC
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAE 352 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~ 352 (378)
+|++..+++|-+.-.-++|||+.---.+|+..+|+++-+.........
T Consensus 218 cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~h~Dl~~l 265 (274)
T TIGR01658 218 CFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDLHPDSSHR 265 (274)
T ss_pred HHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeecCCCHHHh
Confidence 499999999987788899999999999999999999999876444433
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.012 Score=55.48 Aligned_cols=62 Identities=11% Similarity=0.101 Sum_probs=43.9
Q ss_pred HHHHHHHHcCCC--CCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCC---C-cEEecCCCcch
Q 017067 305 ALRAGAEYAEKP--VRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPS---A-NAVMDGFGGAD 367 (378)
Q Consensus 305 a~~~a~~~lgv~--p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~---a-d~vi~~l~e~~ 367 (378)
+++..++++|++ ++++++|||+.||+.|.+.+|..+++-+... ...++.. | ++|..+-.+-+
T Consensus 180 ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~-~~~~lk~~~~a~~~vt~~~~~dG 247 (256)
T TIGR01486 180 AANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNG-PNVSLKPGDPGSFLLTPAPGPEG 247 (256)
T ss_pred HHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCC-CccccCccCCCcEEEcCCCCcHH
Confidence 378889999999 9999999999999999999995544433221 0022332 3 47887665543
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.0045 Score=57.72 Aligned_cols=57 Identities=9% Similarity=-0.034 Sum_probs=41.7
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCc----EEecCCCc
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSAN----AVMDGFGG 365 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad----~vi~~l~e 365 (378)
++.+++++|++++++++|||+.||+.|++.+|...+ +.+. ..+-...|+ +|.++-.+
T Consensus 164 l~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~ia-v~na--~~~~k~~a~~~~~~v~~~~~~ 224 (236)
T TIGR02471 164 LRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVV-VGNH--DPELEGLRHQQRIYFANNPHA 224 (236)
T ss_pred HHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEE-EcCC--cHHHHHhhcCCcEEEcCCCCh
Confidence 889999999999999999999999999999985543 3332 222222355 66665443
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.011 Score=53.69 Aligned_cols=37 Identities=14% Similarity=0.041 Sum_probs=34.1
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
+++.++++++++++++++|||+.||+.+++.+|+..+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 167 ALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred HHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 3888999999999999999999999999999998764
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.026 Score=53.95 Aligned_cols=64 Identities=16% Similarity=0.068 Sum_probs=50.7
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHc---CCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHHh
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI---GMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a---G~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l~ 374 (378)
+++..++.+|+..+++++|||..||+.|.+.+ |..+|.|.+.. ..|++.+++..++...+..|.
T Consensus 178 al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~------~~A~~~l~~~~~v~~~L~~l~ 244 (266)
T PRK10187 178 AIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA------TQASWRLAGVPDVWSWLEMIT 244 (266)
T ss_pred HHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC------CcCeEeCCCHHHHHHHHHHHH
Confidence 48888999999999999999999999999988 33445554332 337899999998877777665
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.035 Score=50.87 Aligned_cols=37 Identities=16% Similarity=0.346 Sum_probs=29.6
Q ss_pred HHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 189 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 189 v~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
..+.|++|+++|++++++|+ +....+..+++.+++..
T Consensus 20 ~~~al~~l~~~g~~~~i~TG---R~~~~~~~~~~~~~~~~ 56 (254)
T PF08282_consen 20 TIEALKELQEKGIKLVIATG---RSYSSIKRLLKELGIDD 56 (254)
T ss_dssp HHHHHHHHHHTTCEEEEECS---STHHHHHHHHHHTTHCS
T ss_pred HHHHHHhhcccceEEEEEcc---Ccccccccccccccchh
Confidence 35677888889999999999 44677888888888773
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.034 Score=52.58 Aligned_cols=44 Identities=20% Similarity=0.104 Sum_probs=35.1
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCC
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTS 349 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~ 349 (378)
|++..++++++++++++++|||.||+.|. ..+...|.|.+....
T Consensus 169 Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 169 ALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQPE 212 (247)
T ss_dssp HHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-HH
T ss_pred HHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCCHH
Confidence 48889999999999999999999999988 777788998876433
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.33 Score=46.13 Aligned_cols=57 Identities=14% Similarity=0.173 Sum_probs=43.3
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
+.||+.++|+.|+++|++++++||.+..........++.+|+.--.+. ++++...-.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~-i~ts~~~~~ 78 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDE-VFTPAPAAR 78 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHH-eEcHHHHHH
Confidence 688999999999999999999999775444567778888998643333 555544433
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.28 Score=46.43 Aligned_cols=60 Identities=30% Similarity=0.524 Sum_probs=40.9
Q ss_pred HHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 174 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 174 ~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
+.+.+....+.+++|+.++++.|+++++|+.|.|+ +....+..+++..|.. +....|+++
T Consensus 80 i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSA---GlgdvI~~vL~q~~~~-~~Nv~VvSN 139 (246)
T PF05822_consen 80 IEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSA---GLGDVIEEVLRQAGVF-HPNVKVVSN 139 (246)
T ss_dssp HHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEE---EEHHHHHHHHHHTT---BTTEEEEEE
T ss_pred HHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeC---CcHHHHHHHHHHcCCC-CCCeEEEee
Confidence 34455555788999999999999999999999999 7789999999988543 233445555
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.23 Score=52.47 Aligned_cols=37 Identities=14% Similarity=0.205 Sum_probs=25.0
Q ss_pred HHHHHHHHHHcCCCCCcEE-EEeCCHhHHHHHHHcCCC
Q 017067 303 VAALRAGAEYAEKPVRNCF-LIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 303 ~~a~~~a~~~lgv~p~~~i-~VGDs~~Di~aA~~aG~~ 339 (378)
|+|+.-..+.+.-..+-.+ -||...+|+-.-+++|++
T Consensus 635 IAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP 672 (738)
T KOG2116|consen 635 IACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVP 672 (738)
T ss_pred HHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecCC
Confidence 4556555566652223222 389999999999999986
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.053 Score=51.08 Aligned_cols=37 Identities=5% Similarity=-0.047 Sum_probs=31.6
Q ss_pred HHHHHHHcCCCCCcEEEEeC----CHhHHHHHHHcCCCEEEEcCC
Q 017067 306 LRAGAEYAEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGD----s~~Di~aA~~aG~~~i~v~~~ 346 (378)
++..+++ ++++++||| +.||+.|.+.+|..++.|.++
T Consensus 193 l~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~ 233 (247)
T PTZ00174 193 LRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNP 233 (247)
T ss_pred HHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCH
Confidence 6777777 699999999 899999999988887888744
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.28 Score=39.84 Aligned_cols=32 Identities=22% Similarity=0.244 Sum_probs=21.5
Q ss_pred EEEeccccccccccc-chHHHHHHHHHHcCCCC
Q 017067 87 VLLEVDGVLVDAYRF-GNRQAFNVAFQKLGLDC 118 (378)
Q Consensus 87 viFDlDGTLid~~~~-~~~~a~~~~~~~~gl~~ 118 (378)
++||+||||+..... .-...+-+.+++.|.+.
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~~ 33 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKPV 33 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTTSEE
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCCE
Confidence 689999999986543 12244455666677764
|
... |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.09 Score=45.79 Aligned_cols=48 Identities=19% Similarity=0.504 Sum_probs=37.7
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCc-cccchhee
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS-ERISKIKI 234 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi-~~~f~~~i 234 (378)
+..+||+.++|+.+.+. +.++|.|.+ ....++.+++.+.+ ..+|...+
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~---~~~ya~~v~~~ldp~~~~~~~~~ 83 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSA---SEEYAEPVLDALDPNGKLFSRRL 83 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS----HHHHHHHHHHHTTTTSSEEEEE
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEee---hhhhhhHHHHhhhhhcccccccc
Confidence 45899999999999666 999999994 47899999999998 46676543
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.06 E-value=0.16 Score=52.51 Aligned_cols=45 Identities=16% Similarity=0.354 Sum_probs=38.9
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchh
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~ 232 (378)
..||++|=..+||+.|++.+.+|+ ..+-.+..+....|++++...
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TG---DN~~TAa~IA~EAGVDdfiAe 492 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITG---DNPLTAAAIAAEAGVDDFIAE 492 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeC---CCHHHHHHHHHHhCchhhhhc
Confidence 579999999999999999999999 446778888899999987643
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=92.59 E-value=1 Score=46.75 Aligned_cols=33 Identities=9% Similarity=0.015 Sum_probs=27.3
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH-hCccc
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSER 228 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~-lgi~~ 228 (378)
.++..+..| +++|+|. +++.+++..++. +|.+.
T Consensus 101 ~~~~~~~~g-~~vVVTA---sPrvmVEpFake~LG~D~ 134 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTR---MPRVMVERFAKEHLRADE 134 (498)
T ss_pred HHHHHHcCC-eEEEEeC---CHHHHHHHHHHHhcCCce
Confidence 556667788 9999999 678999999998 88765
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=92.56 E-value=1.4 Score=41.15 Aligned_cols=49 Identities=16% Similarity=0.262 Sum_probs=36.3
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH-hCccccchh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKI 232 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~-lgi~~~f~~ 232 (378)
.++|++.+.|+.++++|+++.++||.+..........+.. +|+.-..+.
T Consensus 14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~ 63 (236)
T TIGR01460 14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQ 63 (236)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 4689999999999999999999999873344444445555 787544444
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.55 E-value=0.65 Score=47.39 Aligned_cols=103 Identities=12% Similarity=0.118 Sum_probs=75.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
+-+.-...++.+.+.+.|.+|+++|.-- -+....+.++...|++-.--. ++.+.+..-.
T Consensus 98 Lypn~~~~eL~e~ai~n~krVIlISDMY-lps~Il~~~L~s~g~d~~nip-iY~S~e~rl~------------------- 156 (635)
T COG5610 98 LYPNKKNIELVEEAIKNEKRVILISDMY-LPSSILRTFLNSFGPDFNNIP-IYMSSEFRLK------------------- 156 (635)
T ss_pred eeccccchHHHHHHHhCCCeEEEEeccc-CcHHHHHHHHHhcCCCccCce-eeecceeehh-------------------
Confidence 3455567789999999999999999855 245777888888887654322 4444332211
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHh-HHHHHHHcCCCEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-GVAGAQRIGMPCV 341 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~-Di~aA~~aG~~~i 341 (378)
|-+-++ |.++++...++|.+-+++||..+ |+.+++..|+.|.
T Consensus 157 -----------------------KnSg~L--------------Fk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tl 199 (635)
T COG5610 157 -----------------------KNSGNL--------------FKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTL 199 (635)
T ss_pred -----------------------cccchH--------------HHHHHhhcCCChhheEEecCchhhhhcCccccchhHH
Confidence 222233 88899999999999999999875 9999999998876
Q ss_pred EE
Q 017067 342 VM 343 (378)
Q Consensus 342 ~v 343 (378)
..
T Consensus 200 f~ 201 (635)
T COG5610 200 FY 201 (635)
T ss_pred HH
Confidence 54
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.24 E-value=0.34 Score=46.31 Aligned_cols=35 Identities=3% Similarity=-0.082 Sum_probs=22.1
Q ss_pred CCHHHHHHHHHH-CCCcEEEEeCCCCCchHHHHHHHHHh
Q 017067 187 PGVEDFVDDAYN-EGIPLIVLTAYGKSGDRIARSVVEKL 224 (378)
Q Consensus 187 pgv~~lL~~Lk~-~G~~v~ivTn~~~~~~~~~~~~l~~l 224 (378)
|.+.+.|+.|++ .|+.++|+|+. ....+..+++.+
T Consensus 39 ~~~~~~L~~L~~~~g~~v~i~SGR---~~~~~~~~~~~~ 74 (266)
T PRK10187 39 DNILQGLQLLATANDGALALISGR---SMVELDALAKPY 74 (266)
T ss_pred HHHHHHHHHHHhCCCCcEEEEeCC---CHHHHHHhcCcc
Confidence 344667777776 68888888884 344454454433
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=92.19 E-value=0.23 Score=54.23 Aligned_cols=64 Identities=11% Similarity=0.042 Sum_probs=46.6
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHHh
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l~ 374 (378)
+++..++ +++++.++++||+.||+.|.+.++...+.|..+.. -..|++++++..|+-.++..|.
T Consensus 661 al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~~eV~~~L~~l~ 724 (726)
T PRK14501 661 AVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQREVRELLRRLL 724 (726)
T ss_pred HHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCHHHHHHHHHHHh
Confidence 3666676 78899999999999999999998533333333322 2348999999988776666654
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=91.91 E-value=0.13 Score=48.45 Aligned_cols=37 Identities=5% Similarity=-0.064 Sum_probs=32.0
Q ss_pred HHHcCCCCCcEEEEeC----CHhHHHHHHHcCCCEEEEcCCC
Q 017067 310 AEYAEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRSSL 347 (378)
Q Consensus 310 ~~~lgv~p~~~i~VGD----s~~Di~aA~~aG~~~i~v~~~~ 347 (378)
++.+. +++++++||| +.||++|.+.-|+.++-|.++.
T Consensus 194 l~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~ 234 (245)
T PLN02423 194 LQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPD 234 (245)
T ss_pred HHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHH
Confidence 44444 9999999999 7999999999999999998773
|
|
| >COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.88 E-value=0.57 Score=47.50 Aligned_cols=35 Identities=11% Similarity=0.114 Sum_probs=28.8
Q ss_pred HHHHHHHHcCCCCCcEE-EEeCCHhHHHHHHHcCCC
Q 017067 305 ALRAGAEYAEKPVRNCF-LIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i-~VGDs~~Di~aA~~aG~~ 339 (378)
||..-++.++..++-.+ -+|...+|+.+-..+|++
T Consensus 481 ayLndl~slf~e~~PFyAGFGNriTDvisY~~vgIp 516 (580)
T COG5083 481 AYLNDLKSLFIEFDPFYAGFGNRITDVISYSNVGIP 516 (580)
T ss_pred HHHHHHHHhhCcCChhhccccccchhheeeccccCC
Confidence 47777888888777555 589999999999999985
|
|
| >KOG1618 consensus Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.74 E-value=1.2 Score=43.64 Aligned_cols=27 Identities=19% Similarity=0.176 Sum_probs=18.9
Q ss_pred CCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 315 KPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 315 v~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
..-++++++|+. +--+.|+..|++-|.
T Consensus 118 ~~~k~vLv~G~~-~vr~vAegyGFk~Vv 144 (389)
T KOG1618|consen 118 YHYKRVLVVGQG-SVREVAEGYGFKNVV 144 (389)
T ss_pred hhhceEEEecCC-cHHHHhhccCcccee
Confidence 345778888854 345678888888665
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.45 E-value=0.73 Score=50.35 Aligned_cols=43 Identities=26% Similarity=0.430 Sum_probs=37.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
-|.+|||.+.++.++.+|+.|-.+|+ ..-..++.+....||..
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTG---DNI~TAkAIA~eCGILt 688 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTG---DNINTAKAIARECGILT 688 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeC---CcHHHHHHHHHHccccc
Confidence 46899999999999999999999999 44678889999999853
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=90.21 E-value=0.16 Score=47.80 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=24.2
Q ss_pred CCccEEEEecccccccccccchHHHHHHHH---HHcCCCC
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAF---QKLGLDC 118 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~---~~~gl~~ 118 (378)
|++|.|+|||||||++.... ......+++ .+.|+..
T Consensus 3 ~~~klia~DlDGTLL~~~~~-is~~~~~ai~~l~~~Gi~~ 41 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRNP-ITQEMKDTLAKLKSKGFKI 41 (247)
T ss_pred CCCeEEEEECcCCCcCCCCC-CCHHHHHHHHHHHHCCCEE
Confidence 66899999999999998653 223334443 3456654
|
|
| >KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=89.77 E-value=0.49 Score=47.29 Aligned_cols=26 Identities=31% Similarity=0.526 Sum_probs=20.4
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCC
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYG 210 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~ 210 (378)
++|.+..=|+.|.+.||.+.|.||..
T Consensus 105 l~~~vp~Klktl~~~g~~l~iftnq~ 130 (422)
T KOG2134|consen 105 LFPEVPSKLKTLYQDGIKLFIFTNQN 130 (422)
T ss_pred eccccchhhhhhccCCeEEEEEeccc
Confidence 45556667788888899999999865
|
|
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.40 E-value=1.1 Score=39.31 Aligned_cols=36 Identities=11% Similarity=0.166 Sum_probs=31.7
Q ss_pred CCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCC
Q 017067 315 KPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSR 350 (378)
Q Consensus 315 v~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~ 350 (378)
..+++.+||||.. +||-+|...|.-.||+..+....
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~~ 173 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRAE 173 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEeccccccc
Confidence 5689999999996 79999999999999998886554
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=89.08 E-value=0.42 Score=45.04 Aligned_cols=31 Identities=13% Similarity=0.186 Sum_probs=20.0
Q ss_pred CCccEEE-EecccccccccccchHHHHHHHHHH
Q 017067 82 PRDLAVL-LEVDGVLVDAYRFGNRQAFNVAFQK 113 (378)
Q Consensus 82 ~~~kavi-FDlDGTLid~~~~~~~~a~~~~~~~ 113 (378)
.++++++ |||||||++.... ......+++++
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~~-i~~~~~~ai~~ 35 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRKE-ATPEMLEFMKE 35 (245)
T ss_pred CccceEEEEeccCCCcCCCCc-CCHHHHHHHHH
Confidence 4567666 9999999987653 33333444443
|
|
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.92 E-value=0.56 Score=46.33 Aligned_cols=125 Identities=14% Similarity=0.089 Sum_probs=70.1
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHH---HhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVE---KLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~---~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
-.|....+++.|+++|-++-++||+ +-.++..-+. --.|.++|++.|+-++.. +.|+.-.- -....|+.
T Consensus 241 r~~ql~~fl~kL~~~GKklFLiTNS---PysFVd~GM~flvG~~WRdlFDVVIvqA~KP--~Fftde~r---PfR~~dek 312 (510)
T KOG2470|consen 241 RNPQLLAFLRKLKDHGKKLFLITNS---PYSFVDKGMRFLVGDDWRDLFDVVIVQANKP--EFFTDERR---PFRKYDEK 312 (510)
T ss_pred ccHHHHHHHHHHHHhcCcEEEEeCC---chhhhhcCceeeeCccHHhhhheeEEecCCC--cccccccC---cchhhccc
Confidence 4567788999999999999999995 4555543332 334678898865543221 11211110 00001100
Q ss_pred ---hhHHHHHHhhHHHHHHHHHHHhhhccccc-cCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHH-H
Q 017067 262 ---LATEARKAVSAQKQEIAEEVASMLKLSVD-IDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQ-R 335 (378)
Q Consensus 262 ---~~~~~~ka~~~~~~~~~~~~~~~~KP~p~-i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~-~ 335 (378)
+.|..- - |..++ |+ ..+- +...++.-|-.-.+++++||+. +|+.... .
T Consensus 313 ~~sl~wdkv--------------~---klekgkiY------y~G~---l~~flelt~WrG~~VlYFGDHlySDLad~tlk 366 (510)
T KOG2470|consen 313 RGSLLWDKV--------------D---KLEKGKIY------YQGN---LKSFLELTGWRGPRVLYFGDHLYSDLADLTLK 366 (510)
T ss_pred ccchhhhhh--------------h---hcccCcee------eecc---HHHHHHHhccCCCeeEEecCcchhhhhhhHhh
Confidence 111110 0 11100 00 0111 4455666677788999999996 6998877 8
Q ss_pred cCCCEEEE
Q 017067 336 IGMPCVVM 343 (378)
Q Consensus 336 aG~~~i~v 343 (378)
+||++-.+
T Consensus 367 hgWRTgAI 374 (510)
T KOG2470|consen 367 HGWRTGAI 374 (510)
T ss_pred cccccccc
Confidence 99987654
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=88.53 E-value=6.6 Score=37.46 Aligned_cols=27 Identities=7% Similarity=0.112 Sum_probs=23.9
Q ss_pred EEEeCCHhHHHHHHHcCCCEEEEcCCCC
Q 017067 321 FLIAGSQSGVAGAQRIGMPCVVMRSSLT 348 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~~~ 348 (378)
||++|....++.|. .+++++.|+.+..
T Consensus 236 IFFDDQ~~H~~~a~-~~vps~hVP~gv~ 262 (264)
T PF06189_consen 236 IFFDDQDGHLESAS-KVVPSGHVPYGVA 262 (264)
T ss_pred EeecCchhhhhHhh-cCCCEEeccCCcC
Confidence 89999999999998 8899999987754
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=88.51 E-value=1.1 Score=45.12 Aligned_cols=66 Identities=11% Similarity=0.000 Sum_probs=48.3
Q ss_pred HHHHHHHHcCCCCCc-E--EEEeCCHhHHHHHHHc-----CCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHHhh
Q 017067 305 ALRAGAEYAEKPVRN-C--FLIAGSQSGVAGAQRI-----GMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKLRH 375 (378)
Q Consensus 305 a~~~a~~~lgv~p~~-~--i~VGDs~~Di~aA~~a-----G~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l~~ 375 (378)
|.+..++.+|+...+ + ++|||..||..|.+.+ |+ .|.|..+. .-..|.+.+++..++...+..|..
T Consensus 305 Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~-~I~Vgn~~----~~t~A~y~L~dp~eV~~~L~~L~~ 378 (384)
T PLN02580 305 AVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGY-GILVSSVP----KESNAFYSLRDPSEVMEFLKSLVT 378 (384)
T ss_pred HHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCce-EEEEecCC----CCccceEEcCCHHHHHHHHHHHHH
Confidence 478889999988764 3 8999999999999863 43 34444331 122478999999998877777653
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=88.17 E-value=0.29 Score=41.65 Aligned_cols=26 Identities=8% Similarity=0.045 Sum_probs=20.8
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCC
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYG 210 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~ 210 (378)
+.+++.+.|+.++++|+.++++|+..
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~ 50 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRN 50 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 44566778888889999999999854
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.04 E-value=1.6 Score=49.73 Aligned_cols=43 Identities=23% Similarity=0.245 Sum_probs=34.0
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
-++..||.+.|+.|+++|+|+.++|+ .-.+.+..+.-..++.+
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTG---DK~ETAiNIg~sC~Ll~ 692 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTG---DKQETAINIGYSCRLLR 692 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcC---cHHHHHHHHHHhhcCCC
Confidence 45889999999999999999999999 33456666666666543
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=87.39 E-value=0.49 Score=43.29 Aligned_cols=39 Identities=21% Similarity=0.445 Sum_probs=34.5
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~ 227 (378)
.+|++.++|+.+.+. +.++|-|.+. ...+..+++.+++.
T Consensus 46 kRP~l~eFL~~~~~~-feIvVwTAa~---~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 46 MRPYLHEFLTSAYED-YDIVIWSATS---MKWIEIKMTELGVL 84 (195)
T ss_pred eCCCHHHHHHHHHhC-CEEEEEecCC---HHHHHHHHHHhccc
Confidence 689999999999995 9999999954 58999999998874
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=86.78 E-value=0.32 Score=42.42 Aligned_cols=15 Identities=47% Similarity=0.698 Sum_probs=13.4
Q ss_pred ccEEEEecccccccc
Q 017067 84 DLAVLLEVDGVLVDA 98 (378)
Q Consensus 84 ~kaviFDlDGTLid~ 98 (378)
+|+|+||+||||++.
T Consensus 1 ~~~~~~D~Dgtl~~~ 15 (154)
T TIGR01670 1 IRLLILDVDGVLTDG 15 (154)
T ss_pred CeEEEEeCceeEEcC
Confidence 478999999999994
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.14 E-value=1.4 Score=42.33 Aligned_cols=38 Identities=16% Similarity=0.129 Sum_probs=27.0
Q ss_pred CCCccEEEEeccccccccccc-chHHHHHHHHHHcCCCC
Q 017067 81 PPRDLAVLLEVDGVLVDAYRF-GNRQAFNVAFQKLGLDC 118 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~-~~~~a~~~~~~~~gl~~ 118 (378)
...+++++||+||||++.... .-...+-+.+++.|++.
T Consensus 5 ~~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~ 43 (269)
T COG0647 5 MDKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPV 43 (269)
T ss_pred hhhcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeE
Confidence 456889999999999986653 12244455666788874
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=86.02 E-value=0.4 Score=42.82 Aligned_cols=18 Identities=39% Similarity=0.553 Sum_probs=15.6
Q ss_pred CCccEEEEeccccccccc
Q 017067 82 PRDLAVLLEVDGVLVDAY 99 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~ 99 (378)
..+|+++||+||||+|..
T Consensus 5 ~~i~~~v~d~dGv~tdg~ 22 (169)
T TIGR02726 5 KNIKLVILDVDGVMTDGR 22 (169)
T ss_pred ccCeEEEEeCceeeECCe
Confidence 458999999999999963
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=84.50 E-value=2 Score=43.04 Aligned_cols=67 Identities=9% Similarity=-0.106 Sum_probs=48.0
Q ss_pred HHHHHHHHcCCCC---CcEEEEeCCHhHHHHHHHcC----CCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHHhh
Q 017067 305 ALRAGAEYAEKPV---RNCFLIAGSQSGVAGAQRIG----MPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKLRH 375 (378)
Q Consensus 305 a~~~a~~~lgv~p---~~~i~VGDs~~Di~aA~~aG----~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l~~ 375 (378)
|.+..++.+|... .-.+||||-.+|-.|.+.+. --.|.|.... .-..|.+.+++..++...|..|..
T Consensus 287 Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~----k~T~A~y~L~dp~eV~~fL~~L~~ 360 (366)
T PLN03017 287 ALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFP----KDTDASYSLQDPSEVMDFLARLVE 360 (366)
T ss_pred HHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCC----CCCcceEeCCCHHHHHHHHHHHHH
Confidence 5788889988653 35899999999988887662 2355665321 113488999999999887777753
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=84.22 E-value=0.5 Score=42.44 Aligned_cols=16 Identities=31% Similarity=0.484 Sum_probs=14.6
Q ss_pred CccEEEEecccccccc
Q 017067 83 RDLAVLLEVDGVLVDA 98 (378)
Q Consensus 83 ~~kaviFDlDGTLid~ 98 (378)
.+|+|+||+||||++.
T Consensus 20 ~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 20 NIRLLICDVDGVFSDG 35 (183)
T ss_pred CceEEEEcCCeeeecC
Confidence 4899999999999985
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.06 E-value=0.51 Score=41.56 Aligned_cols=60 Identities=22% Similarity=0.298 Sum_probs=35.1
Q ss_pred CCCccEEEEeccccccccccc-----chHHHH-------HHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHc
Q 017067 81 PPRDLAVLLEVDGVLVDAYRF-----GNRQAF-------NVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRI 148 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~-----~~~~a~-------~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 148 (378)
..++|.+|||+||||+|..-. ...++| -+.+.+.|+.. .+.+|....+.+.-.+.+
T Consensus 5 a~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~v------------AIITGr~s~ive~Ra~~L 72 (170)
T COG1778 5 AKNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSGIKV------------AIITGRDSPIVEKRAKDL 72 (170)
T ss_pred hhhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcCCeE------------EEEeCCCCHHHHHHHHHc
Confidence 457899999999999995321 011222 24455566653 133444555555666667
Q ss_pred CCCC
Q 017067 149 GWPT 152 (378)
Q Consensus 149 g~~~ 152 (378)
|+..
T Consensus 73 GI~~ 76 (170)
T COG1778 73 GIKH 76 (170)
T ss_pred CCce
Confidence 7653
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=84.01 E-value=2.2 Score=47.62 Aligned_cols=63 Identities=10% Similarity=-0.083 Sum_probs=46.0
Q ss_pred HHHHH---HHcCCCCCcEEEEeCCHhHHHHHHHcCC-------------CEEEEcCCCCCCCCCCCCcEEecCCCcchHH
Q 017067 306 LRAGA---EYAEKPVRNCFLIAGSQSGVAGAQRIGM-------------PCVVMRSSLTSRAEFPSANAVMDGFGGADLT 369 (378)
Q Consensus 306 ~~~a~---~~lgv~p~~~i~VGDs~~Di~aA~~aG~-------------~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~ 369 (378)
++..+ +.+|..++.+++|||..||..|.+.++- -+|.|... -..|.+.+++..|+...
T Consensus 767 l~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~------~S~A~y~L~d~~eV~~l 840 (854)
T PLN02205 767 AKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQK------PSKAKYYLDDTAEIVRL 840 (854)
T ss_pred HHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCC------CccCeEecCCHHHHHHH
Confidence 44444 5579999999999999999999998862 23444422 23378999999888776
Q ss_pred HHHHh
Q 017067 370 ISKLR 374 (378)
Q Consensus 370 ~~~l~ 374 (378)
+..|.
T Consensus 841 L~~L~ 845 (854)
T PLN02205 841 MQGLA 845 (854)
T ss_pred HHHHH
Confidence 66654
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=83.72 E-value=1.8 Score=47.31 Aligned_cols=33 Identities=3% Similarity=0.056 Sum_probs=23.0
Q ss_pred CCHHHHHHHHHH-CCCcEEEEeCCCCCchHHHHHHHH
Q 017067 187 PGVEDFVDDAYN-EGIPLIVLTAYGKSGDRIARSVVE 222 (378)
Q Consensus 187 pgv~~lL~~Lk~-~G~~v~ivTn~~~~~~~~~~~~l~ 222 (378)
+.+.+.|+.|.+ .|+.++|+|+.+ ....+..+.
T Consensus 517 ~~~~~~L~~L~~d~g~~V~ivSGR~---~~~l~~~~~ 550 (726)
T PRK14501 517 KELRDLLRRLAADPNTDVAIISGRD---RDTLERWFG 550 (726)
T ss_pred HHHHHHHHHHHcCCCCeEEEEeCCC---HHHHHHHhC
Confidence 445678888888 499999999943 354444443
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.60 E-value=3 Score=45.75 Aligned_cols=41 Identities=27% Similarity=0.442 Sum_probs=36.2
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi 226 (378)
-||+..+.+.+..++.+|+++..+|+ .....+..+.+..|+
T Consensus 589 dPPR~~vP~Av~~CrsAGIkvimVTg---dhpiTAkAiA~~vgI 629 (1019)
T KOG0203|consen 589 DPPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKSVGI 629 (1019)
T ss_pred CCCcccCchhhhhhhhhCceEEEEec---Cccchhhhhhhheee
Confidence 46899999999999999999999999 556888888888885
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=83.07 E-value=2.3 Score=42.91 Aligned_cols=33 Identities=9% Similarity=0.191 Sum_probs=23.3
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHH
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVV 221 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l 221 (378)
+-|++.+.|+.|.+. .+++|+|+.+ ...++.++
T Consensus 142 ~s~~~~~aL~~La~~-~~VAIVSGR~---~~~L~~~l 174 (384)
T PLN02580 142 MSDAMRSAVKNVAKY-FPTAIISGRS---RDKVYELV 174 (384)
T ss_pred CCHHHHHHHHHHhhC-CCEEEEeCCC---HHHHHHHh
Confidence 456778888998887 5899999954 34444443
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=82.47 E-value=0.71 Score=38.91 Aligned_cols=15 Identities=13% Similarity=0.306 Sum_probs=13.3
Q ss_pred cEEEEeccccccccc
Q 017067 85 LAVLLEVDGVLVDAY 99 (378)
Q Consensus 85 kaviFDlDGTLid~~ 99 (378)
|+++||+||||++..
T Consensus 1 kli~~DlD~Tl~~~~ 15 (128)
T TIGR01681 1 KVIVFDLDNTLWTGE 15 (128)
T ss_pred CEEEEeCCCCCCCCC
Confidence 579999999999874
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=81.76 E-value=2.2 Score=40.55 Aligned_cols=42 Identities=19% Similarity=0.184 Sum_probs=34.8
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc
Q 017067 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (378)
Q Consensus 186 ~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f 230 (378)
.|++.++|+.|+++|++++++|| +....+..+++.+|+..++
T Consensus 23 ~~~~~~ai~~l~~~Gi~~~iaTg---R~~~~~~~~~~~l~l~~~~ 64 (273)
T PRK00192 23 YEPAKPALKALKEKGIPVIPCTS---KTAAEVEVLRKELGLEDPF 64 (273)
T ss_pred cHHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCCCE
Confidence 35578899999999999999999 4467888899999987543
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.47 E-value=2.7 Score=46.01 Aligned_cols=156 Identities=13% Similarity=0.134 Sum_probs=81.8
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhh-HHHhhhhcccccccc-ccC--
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE-VERSLYGQFVLGKGI-SSG-- 257 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~-~~~~~~~~~v~g~~v-~~~-- 257 (378)
..|+.|+.+..|+.|.+.+++++.+|+- ..-.+..+.+.+|+.+---..+.-.++ -++.+-=.-++|..+ +-.
T Consensus 673 ~CPlK~Ds~~~I~el~~SSH~vvMITGD---npLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~ 749 (1160)
T KOG0209|consen 673 SCPLKPDSKKTIKELNNSSHRVVMITGD---NPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPG 749 (1160)
T ss_pred eCCCCccHHHHHHHHhccCceEEEEeCC---CccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCC
Confidence 4789999999999999999999999993 345666777777775432111111111 111000000111100 000
Q ss_pred cchh-hhHHHHHHhhHHHHH--HHHHHHhhhccccccCCC-CcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHH
Q 017067 258 VDEQ-LATEARKAVSAQKQE--IAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 333 (378)
Q Consensus 258 ~~~~-~~~~~~ka~~~~~~~--~~~~~~~~~KP~p~i~kp-~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA 333 (378)
.++. +....+-........ .+-+.....=|+..++-- +|+..+.+|+. ++.+|. -++|-||+.||+-|.
T Consensus 750 ~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~t----lK~~Gy---~TLMCGDGTNDVGAL 822 (1160)
T KOG0209|consen 750 KKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITT----LKKLGY---VTLMCGDGTNDVGAL 822 (1160)
T ss_pred ccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHH----HHhcCe---EEEEecCCCcchhhh
Confidence 0000 000000000000000 111222223333333221 35556666444 456664 589999999999999
Q ss_pred HHcCCCEEEEcCCC
Q 017067 334 QRIGMPCVVMRSSL 347 (378)
Q Consensus 334 ~~aG~~~i~v~~~~ 347 (378)
+.|.+.....+++.
T Consensus 823 K~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 823 KQAHVGVALLNNPE 836 (1160)
T ss_pred hhcccceehhcCCh
Confidence 99998888887775
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=80.58 E-value=9 Score=37.55 Aligned_cols=43 Identities=28% Similarity=0.363 Sum_probs=32.2
Q ss_pred CCCCHHHHHHHHHHC----CCcEEEEeCCCCCchHH-HHHHHHHhCcc
Q 017067 185 LRPGVEDFVDDAYNE----GIPLIVLTAYGKSGDRI-ARSVVEKLGSE 227 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~----G~~v~ivTn~~~~~~~~-~~~~l~~lgi~ 227 (378)
+.||+.++++.|+.+ |+++.++||.+...... ++.+.+.+|+.
T Consensus 17 ~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 17 PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 589999999999998 99999999965322333 44444777764
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.02 E-value=2.7 Score=36.48 Aligned_cols=26 Identities=12% Similarity=0.156 Sum_probs=23.5
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCC
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAY 209 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~ 209 (378)
+...|++++++++|-+. +.|+|+|..
T Consensus 67 L~V~p~aq~v~keLt~~-y~vYivtaa 92 (180)
T COG4502 67 LGVQPFAQTVLKELTSI-YNVYIVTAA 92 (180)
T ss_pred cCccccHHHHHHHHHhh-heEEEEEec
Confidence 45899999999999988 999999986
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 4e-10
Identities = 33/167 (19%), Positives = 68/167 (40%), Gaps = 24/167 (14%)
Query: 80 NPPRDL-AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG-DE 137
+ PR + A + ++DG+L+D+ +A LG+D + + L + G
Sbjct: 4 STPRQILAAIFDMDGLLIDSEPLW-DRAELDVMASLGVDISRR------NELPDTLGLRI 56
Query: 138 DRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAY 197
D ++ L++ R W P+ ++ + E+ A L + PL PGV + V
Sbjct: 57 DMVVDLWYARQPWNG--PSRQE-------VVERVIARAISLVEETRPLLPGVREAVALCK 107
Query: 198 NEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERS 243
+G+ + + +A S + V+ + + E++ S
Sbjct: 108 EQGLLVGLASA---SPLHMLEKVLTMFDLRDSFD--ALASAEKLPYS 149
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 8e-10
Identities = 24/158 (15%), Positives = 53/158 (33%), Gaps = 6/158 (3%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A++L+ G +D AF F++ G++ T + + + R ++
Sbjct: 16 ALILDWAGTTIDFGSLAPVYAFMELFKQEGIE---VTQAEAREPMGTEKSEHIRRMLGNS 72
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
S+ L + + + ++ + L PG ++ D +GI +
Sbjct: 73 RIANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGG 132
Query: 206 LTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
T YG + + + + V +V R
Sbjct: 133 NTGYGP---GMMAPALIAAKEQGYTPASTVFATDVVRG 167
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 1e-09
Identities = 29/163 (17%), Positives = 53/163 (32%), Gaps = 16/163 (9%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR-----M 140
AV+ G VD F + F F K G+ I + RK G +
Sbjct: 8 AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGV-------AITAEEARKPMGLLKIDHVRAL 60
Query: 141 LVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEG 200
+ W +A ++ + +E + L L + A GV++ + G
Sbjct: 61 TEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILP-RYASPINGVKEVIASLRERG 119
Query: 201 IPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
I + T Y + V ++ + +V ++V
Sbjct: 120 IKIGSTTGY---TREMMDIVAKEAALQGYKPDFLVTPDDVPAG 159
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 2e-09
Identities = 18/163 (11%), Positives = 51/163 (31%), Gaps = 30/163 (18%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A++ ++DGVL D ++ + G+ + + + ++
Sbjct: 7 AIIFDMDGVLFDTEKYY-YDRRASFLGQKGIS---IDHLPPSFFIGGNT---KQVWENIL 59
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
V T + +E + P V +++ ++G+ + +
Sbjct: 60 RDEYDKWDVST---------LQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGL 110
Query: 206 LTAYGKSGDRIARSVVEKLGSERISKIK-----IVGNEEVERS 243
++ S +E+ ++ ++ EE + S
Sbjct: 111 ASS---SVKADIFRALEENR------LQGFFDIVLSGEEFKES 144
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 9e-09
Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 22/161 (13%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
V+ ++DGV+ D QA+ ++G+ A L S D L
Sbjct: 7 GVIFDLDGVITDTAHLH-FQAWQQIAAEIGIS---IDAQFNESLKGISR---DESLRRIL 59
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNAL--DEFLASKDAPLRPGVEDFVDDAYNEGIPL 203
G + E+ L +KN L + PG+ + D + I +
Sbjct: 60 QHGGKEGDFNSQERAQ-----LAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISV 114
Query: 204 IVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERS 243
+ + S A +++ L E + +++ S
Sbjct: 115 GLASV---S--LNAPTILAALELREFFT--FCADASQLKNS 148
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 1e-08
Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 21/159 (13%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
+ + ++DG L D+ N A+ A + A W + RK ML
Sbjct: 8 SFIFDLDGTLTDSVYQ-NVAAWKEALDAENIPLAMW------RIHRKIGMSGGLMLKSLS 60
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
G + E+ L EK E L + L PG + ++ E + +
Sbjct: 61 RETGMSITDEQAER-------LSEKHAQAYERLQHQIIAL-PGAVELLETLDKENLKWCI 112
Query: 206 LTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERS 243
T+ G A ++ L IV ++V
Sbjct: 113 ATS---GGIDTATINLKALKLDINKI--NIVTRDDVSYG 146
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 8e-08
Identities = 26/161 (16%), Positives = 54/161 (33%), Gaps = 24/161 (14%)
Query: 86 AVLLEVDGVLVD---AYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV 142
AVL ++DGVL D + ++++ ++ G + ++ +
Sbjct: 25 AVLFDMDGVLFDSMPNHA----ESWHKIMKRFGFG---LSREEAYMHEGRTGAS---TIN 74
Query: 143 LFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIP 202
+ R + +K + Q K +EF A PG + + +EG+
Sbjct: 75 IVSRRERGHDATE-----EEIKAIYQAKT---EEFNKCPKAERMPGALEVLTKIKSEGLT 126
Query: 203 LIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
+V+T SG + +V +V+
Sbjct: 127 PMVVTG---SGQTSLLDRLNHNFPGIFQANLMVTAFDVKYG 164
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 1e-07
Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 25/176 (14%)
Query: 75 GHDSQNPPRDL-------AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYT 127
H S PR AVL ++DGVL ++ + + +A++ + GLD +
Sbjct: 8 HHSSGLVPRGSHMRKKLKAVLFDMDGVLFNSMPY-HSEAWHQVMKTHGLD---LSREEAY 63
Query: 128 DLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRP 187
++ + + F R E ++ + +K+ L F + +A P
Sbjct: 64 MHEGRTGAS---TINIVFQRELGKE-ATQEEIES-----IYHEKSIL--FNSYPEAERMP 112
Query: 188 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
G + + +EG+ +V+T SG +E K +V +V+
Sbjct: 113 GAWELLQKVKSEGLTPMVVTG---SGQLSLLERLEHNFPGMFHKELMVTAFDVKYG 165
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 8e-07
Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 22/161 (13%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
AV+ ++DGV+ D + A+ +++ + + + L S + L
Sbjct: 4 AVIFDLDGVITDTAEYH-FLAWKHIAEQIDIP---FDRDMNERLKGISREE---SLESIL 56
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAP--LRPGVEDFVDDAYNEGIPL 203
G T EK+ L +KN + L SK P L PG+ + NE I +
Sbjct: 57 IFGGAETKYTNAEKQE-----LMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKI 111
Query: 204 IVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERS 243
+ ++ R A ++ +L + IV + +
Sbjct: 112 GLASS-----SRNAPKILRRLAIIDDFH--AIVDPTTLAKG 145
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 2e-06
Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 23/161 (14%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
AVL ++DGV+ D + +A+ +++G++ + L S D + ++
Sbjct: 4 AVLFDLDGVITDTAEYH-FRAWKALAEEIGINGVDRQ--FNEQLKGVSREDSLQKILDLA 60
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNA--LDEFLASKDAPLRPGVEDFVDDAYNEGIPL 203
++ V E K L ++KN + A + PG+ + D + I +
Sbjct: 61 DK-----KVSAEEFKE-----LAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKI 110
Query: 204 IVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERS 243
+ +A S + ++E++ + I EV S
Sbjct: 111 ALASA---S--KNGPFLLERMNLTGYFD--AIADPAEVAAS 144
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 3e-06
Identities = 46/315 (14%), Positives = 98/315 (31%), Gaps = 87/315 (27%)
Query: 10 LLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCLHVNPFSA 69
L++ ++ Y Q +L N N F ++ + + Y + L
Sbjct: 94 LMSPIKTEQRQPSMMTRMYIEQRDRLYNDN--QVFAKYNVSRLQPYLKLRQALL------ 145
Query: 70 FSSSSGHDSQNPPRDLAVLLEVDG-------VLV----DAYRFGNRQAFNVAFQKLGLDC 118
P +++ + DG + +Y+ + F + + L +C
Sbjct: 146 --------ELRPAKNVLI----DGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK-NC 192
Query: 119 ANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFL 178
S ML +I P ++ + +K + + L L
Sbjct: 193 -------------NSPETVLEMLQKLLYQID-PNWTSRSDHSSNIKLRIHSIQAELRRLL 238
Query: 179 ASKDAP-----LRPGVEDF-VDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232
SK L V++ +A+N +++ T + + V + L + + I
Sbjct: 239 KSKPYENCLLVLL-NVQNAKAWNAFNLSCKILLTTRF--------KQVTDFLSAATTTHI 289
Query: 233 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDID 292
+ + +L DE + K + + Q++ EV
Sbjct: 290 SL---DHHSMTLT------------PDEVKSLLL-KYLDCRPQDLPREV----------L 323
Query: 293 TSSPESLDKIVAALR 307
T++P L I ++R
Sbjct: 324 TTNPRRLSIIAESIR 338
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 6e-06
Identities = 53/369 (14%), Positives = 106/369 (28%), Gaps = 92/369 (24%)
Query: 27 YYHYQATQL--RNHNCLSPFPSFSSTFPRNYNFHGKCLHVNPF--SAFSSSS-GHDSQNP 81
++H+ + + F F N++ C V S S H +
Sbjct: 3 HHHHMDFETGEHQYQYKDILSVFEDAFVDNFD----CKDVQDMPKSILSKEEIDHIIMSK 58
Query: 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANW-TAPIYTDLLRKSAGDEDRM 140
L L + +++ + +PI T+ + S RM
Sbjct: 59 DAVSGTLR-----LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPS--MMTRM 111
Query: 141 LVLFFNRIGW-------PTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFV 193
+ +R+ + +V + ++ L E LRP
Sbjct: 112 YIEQRDRL-YNDNQVFAKYNVSRLQPYLKLRQALLE---------------LRPA----- 150
Query: 194 DDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQ-FVLGK 252
+++ G G ++ + + + + +V+ + + F L
Sbjct: 151 --------KNVLI--DGVLG--SGKTW---VALD------VCLSYKVQCKMDFKIFWLNL 189
Query: 253 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY 312
+ + L Q++ ++ D ++ + I A LR
Sbjct: 190 KNCNSPETVL---------EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR--RLL 238
Query: 313 AEKPVRNCFLIAGSQSGVAGAQRI---GMPCVVMRSSLTSRAEFPSANAVMDGFGGADLT 369
KP NC L+ V A+ + C ++ LT+R + V D A T
Sbjct: 239 KSKPYENCLLVL---LNVQNAKAWNAFNLSCKIL---LTTRFK-----QVTDFLSAATTT 287
Query: 370 ISKLRHSQW 378
L H
Sbjct: 288 HISLDHHSM 296
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 3e-06
Identities = 29/169 (17%), Positives = 59/169 (34%), Gaps = 30/169 (17%)
Query: 81 PPRDL-AVLLEVDGVLVD---AYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD 136
PP+ + ++ ++DG+L+D Y F + ++ + + ++ K A
Sbjct: 26 PPQPVTHLIFDMDGLLLDTERLYS----VVFQEICNRYDKK---YSWDVKSLVMGKKA-- 76
Query: 137 EDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDA 196
+ + + P S + +++E + L E A L PG E +
Sbjct: 77 -LEAAQIIIDVLQLPMSK---------EELVEESQTKLKEVFP--TAALMPGAEKLIIHL 124
Query: 197 YNEGIPLIVLTAYGKSGDRIARSVVEKLGS--ERISKIKIVGNEEVERS 243
GIP + T+ S + S I + + EV+
Sbjct: 125 RKHGIPFALATS---SRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHG 170
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 27/159 (16%), Positives = 54/159 (33%), Gaps = 28/159 (17%)
Query: 86 AVLLEVDGVLVD-AYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF 144
AV+ + L+D + R F ++G I D + S + ++ L
Sbjct: 27 AVIFDWYNTLIDTSINID-RTTFYQVLDQMGY------KNIDLDSIPNSTIPK-YLITLL 78
Query: 145 FNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLI 204
R K +N+L++ S + L G + +D I +
Sbjct: 79 GKRW---------------KEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMA 123
Query: 205 VLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
+++ K+G+R RS + I+G+ +
Sbjct: 124 IVS--NKNGER-LRSEIHHKNLTHYFDS-IIGSGDTGTI 158
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 4e-04
Identities = 19/142 (13%), Positives = 48/142 (33%), Gaps = 16/142 (11%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGL--DCANWTAPIYTDLLRKSAGDEDRMLVL 143
AVL++ LV ++ + + G D + + DED + +
Sbjct: 5 AVLVDFGNTLVG-FKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHV 63
Query: 144 FFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPL 203
+ + +E+ K + + +A L +F++ + G L
Sbjct: 64 DPKDFLYILGIYPSERLV---------KELKEADIRDGEAFLYDDTLEFLEGLKSNGYKL 114
Query: 204 IVLTAYGKSGDRIARSVVEKLG 225
+++ + ++++EK
Sbjct: 115 ALVS----NASPRVKTLLEKFD 132
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 39.7 bits (93), Expect = 9e-04
Identities = 24/189 (12%), Positives = 45/189 (23%), Gaps = 38/189 (20%)
Query: 63 HVNPFSAFSSSSGHDSQNPPRDL---AVLLEVDGVLVD---AYRFGNRQAFNVAFQKLGL 116
++ A + P L A L +VDG ++ A + +
Sbjct: 11 YIRTTKANIQTIAMPLTTKPLSLKINAALFDVDGTIIISQPAI----AAFWRDFGKDKPY 66
Query: 117 DCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDE 176
+ D + F V K
Sbjct: 67 F---DAEHVIHISHGWRTYD---AIAKFAPDFADEEYV--------------NKLEGEIP 106
Query: 177 FLASKDAPLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDR-IARSVVEKLGSERISKIKI 234
+ + PG + V T SG R +A+ + L +R
Sbjct: 107 EKYGEHSIEVPGAVKLCNALNALPKEKWAVAT----SGTRDMAKKWFDILKIKRPE--YF 160
Query: 235 VGNEEVERS 243
+ +V++
Sbjct: 161 ITANDVKQG 169
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 378 | |||
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.97 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.97 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.97 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.95 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.95 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.95 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.95 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.95 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.95 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.94 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.94 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.94 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.94 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.94 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.94 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.94 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.94 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.94 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.93 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.93 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.93 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.93 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.93 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.93 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.93 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.93 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.92 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.92 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.92 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.92 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.92 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.92 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.92 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.91 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.91 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.91 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.91 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.91 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.91 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.91 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.91 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.9 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.9 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.9 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.9 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.9 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.9 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.9 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.89 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.89 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.89 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.88 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.88 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.88 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.87 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.87 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.87 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.86 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.86 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.86 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.85 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.85 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.84 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.84 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.83 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.82 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.82 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.82 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.81 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.81 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.8 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.79 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.79 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.78 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.78 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.77 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.77 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.77 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.76 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.76 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.76 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.72 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.72 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.71 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.69 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.68 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.68 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.68 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.67 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.66 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.65 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.65 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.65 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.63 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.62 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.62 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.62 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.61 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.61 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.6 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.39 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.59 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.58 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.56 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.56 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.56 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.54 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.53 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.5 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.47 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.41 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.4 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.4 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.39 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.38 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.37 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.35 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.34 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.34 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.34 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.33 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.33 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.32 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.23 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.11 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.1 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.1 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.1 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.05 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.97 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 98.93 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 98.89 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.88 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.8 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.77 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 98.76 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.72 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 98.67 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.61 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.54 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.44 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.25 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.12 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 98.04 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 97.77 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.77 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.66 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.61 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 97.22 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 97.16 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.13 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.01 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 96.99 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 96.97 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 96.96 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 96.76 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 96.37 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 96.04 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 95.48 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 94.8 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 94.75 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 94.44 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 94.35 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 94.23 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 94.01 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 93.46 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 92.85 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 92.09 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 91.68 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 91.67 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 89.59 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 88.09 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 87.06 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 86.64 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 84.95 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 84.95 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 80.44 |
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-30 Score=231.23 Aligned_cols=213 Identities=21% Similarity=0.237 Sum_probs=157.3
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHH
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i 163 (378)
+|||+||+||||+|+... +..+|+++++++|++ ++++.+..+.+ ...................+ ..+.
T Consensus 1 IkAViFD~DGTL~ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~-----~~~~ 68 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPL-YFEAYRRVAESYGKP---YTEDLHRRIMG---VPEREGLPILMEALEIKDSL-----ENFK 68 (216)
T ss_dssp CCEEEEESBTTTBCCGGG-HHHHHHHHHHHTTCC---CCHHHHHHHTT---SCHHHHHHHHHHHTTCCSCH-----HHHH
T ss_pred CeEEEECCCCcccCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHhc---cchhhhhhhhhhcccchhhH-----HHHH
Confidence 589999999999999986 889999999999997 66666555443 23344444555555544331 1222
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHh
Q 017067 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (378)
Q Consensus 164 ~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~ 243 (378)
+.+.+.....+.+ ..+++||+.++++.|+++|++++++||+ ....+...++.+|+.++|+. +++.+++..
T Consensus 69 ~~~~~~~~~~~~~-----~~~~~pg~~~~l~~L~~~g~~~~i~tn~---~~~~~~~~l~~~~l~~~fd~-~~~~~~~~~- 138 (216)
T 3kbb_A 69 KRVHEEKKRVFSE-----LLKENPGVREALEFVKSKRIKLALATST---PQREALERLRRLDLEKYFDV-MVFGDQVKN- 138 (216)
T ss_dssp HHHHHHHHHHHHH-----HCCBCTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHTTCGGGCSE-EECGGGSSS-
T ss_pred HHHHHHHHHHHHH-----hcccCccHHHHHHHHHHcCCCcccccCC---cHHHHHHHHHhcCCCccccc-cccccccCC-
Confidence 2333333333222 2568999999999999999999999994 46888999999999999998 445444321
Q ss_pred hhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 017067 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (378)
Q Consensus 244 ~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~V 323 (378)
.||+|++ |+.+++++|++|++|+||
T Consensus 139 -----------------------------------------~KP~p~~--------------~~~a~~~lg~~p~e~l~V 163 (216)
T 3kbb_A 139 -----------------------------------------GKPDPEI--------------YLLVLERLNVVPEKVVVF 163 (216)
T ss_dssp -----------------------------------------CTTSTHH--------------HHHHHHHHTCCGGGEEEE
T ss_pred -----------------------------------------CcccHHH--------------HHHHHHhhCCCccceEEE
Confidence 2777666 999999999999999999
Q ss_pred eCCHhHHHHHHHcCCCEEE-EcCCCCCCCCCCCC-cEEecCCCcchHHHHHH
Q 017067 324 AGSQSGVAGAQRIGMPCVV-MRSSLTSRAEFPSA-NAVMDGFGGADLTISKL 373 (378)
Q Consensus 324 GDs~~Di~aA~~aG~~~i~-v~~~~~~~~~l~~a-d~vi~~l~e~~~~~~~l 373 (378)
||+.+||++|+++||++|+ +.++....+++..+ +.++.++.++-..+++|
T Consensus 164 gDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~~~eli~~l~eL 215 (216)
T 3kbb_A 164 EDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEILNVLKEV 215 (216)
T ss_dssp ECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEECGGGHHHHHHHH
T ss_pred ecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECCHHHHHHHHHHH
Confidence 9999999999999999985 78887766655432 33444677765556655
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=236.40 Aligned_cols=208 Identities=19% Similarity=0.217 Sum_probs=154.3
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
.+|+||||+||||+|+... +..+|+++++++|++ ++...+..+.+ .........+.........+....
T Consensus 25 MIKaViFDlDGTLvDs~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~---- 93 (250)
T 4gib_A 25 MIEAFIFDLDGVITDTAYY-HYMAWRKLAHKVGID---IDTKFNESLKG---ISRMESLDRILEFGNKKYSFSEEE---- 93 (250)
T ss_dssp CCCEEEECTBTTTBCCHHH-HHHHHHHHHHTTTCC---CCTTGGGGTTT---CCHHHHHHHHHHHTTCTTTSCHHH----
T ss_pred hhheeeecCCCcccCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHhC---cchHHHHHHhhhhhcCCCCCCHHH----
Confidence 4899999999999999887 889999999999997 44333322221 122333334444443333333222
Q ss_pred HHHHHHHHHHHHHHHHhc-CCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 163 VKNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~-~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
...+.+...+.|.+.... ...+++||+.++++.|+++|+++++.|++ ..+..+++.+|+.++|+. +++++++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~-----~~~~~~L~~~gl~~~Fd~-i~~~~~~~ 167 (250)
T 4gib_A 94 KVRMAEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSAS-----KNAINVLNHLGISDKFDF-IADAGKCK 167 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSC-----TTHHHHHHHHTCGGGCSE-ECCGGGCC
T ss_pred HHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHhccccccccccc-----chhhhHhhhcccccccce-eecccccC
Confidence 234444555555555422 24568999999999999999999998774 335678999999999998 45555442
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|++ |..+++++|++|++|+
T Consensus 168 ~------------------------------------------~KP~p~~--------------~~~a~~~lg~~p~e~l 191 (250)
T 4gib_A 168 N------------------------------------------NKPHPEI--------------FLMSAKGLNVNPQNCI 191 (250)
T ss_dssp S------------------------------------------CTTSSHH--------------HHHHHHHHTCCGGGEE
T ss_pred C------------------------------------------CCCcHHH--------------HHHHHHHhCCChHHeE
Confidence 2 2777666 9999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
||||+.+||++|++|||++|+|.++ ..+..||++++++.|+.
T Consensus 192 ~VGDs~~Di~aA~~aG~~~i~v~~~----~~~~~ad~vi~~l~eL~ 233 (250)
T 4gib_A 192 GIEDASAGIDAINSANMFSVGVGNY----ENLKKANLVVDSTNQLK 233 (250)
T ss_dssp EEESSHHHHHHHHHTTCEEEEESCT----TTTTTSSEEESSGGGCC
T ss_pred EECCCHHHHHHHHHcCCEEEEECCh----hHhccCCEEECChHhCC
Confidence 9999999999999999999999765 55667999999999984
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.8e-30 Score=236.17 Aligned_cols=207 Identities=17% Similarity=0.212 Sum_probs=152.9
Q ss_pred CCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhH
Q 017067 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~ 160 (378)
.|++|+||||+||||+|++.. +..+|+++++++|++ ++...+..+. +.........+....+........+
T Consensus 2 ~MkiKaViFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~-- 72 (243)
T 4g9b_A 2 VMKLQGVIFDLDGVITDTAHL-HFQAWQQIAAEIGIS---IDAQFNESLK---GISRDESLRRILQHGGKEGDFNSQE-- 72 (243)
T ss_dssp CCCCCEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCTTGGGGGT---TCCHHHHHHHHHHHTTCGGGCCHHH--
T ss_pred CccCcEEEEcCCCcccCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHc---CCCHHHHHHHHHHHhhcccchhHHH--
Confidence 477999999999999999987 889999999999997 4544333332 2233444555666665443332222
Q ss_pred HHHHHHHHHHHHHHHHHHhcC-CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhh
Q 017067 161 AFVKNVLQEKKNALDEFLASK-DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 239 (378)
Q Consensus 161 ~~i~~~~~~~~~~~~~~l~~~-~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~ 239 (378)
...+.......+.+.+... ...++||+.++++.|+++|++++++||+. ....+++.+|+.++|+. ++++++
T Consensus 73 --~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~-----~~~~~l~~~gl~~~fd~-i~~~~~ 144 (243)
T 4g9b_A 73 --RAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSL-----NAPTILAALELREFFTF-CADASQ 144 (243)
T ss_dssp --HHHHHHHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCT-----THHHHHHHTTCGGGCSE-ECCGGG
T ss_pred --HHHHHHHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceeccccc-----chhhhhhhhhhcccccc-cccccc
Confidence 2233333344444444222 34689999999999999999999999953 35678999999999998 555554
Q ss_pred HHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCc
Q 017067 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (378)
Q Consensus 240 ~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~ 319 (378)
+.. +||+|++ |+.+++++|++|++
T Consensus 145 ~~~------------------------------------------~KP~p~~--------------~~~a~~~lg~~p~e 168 (243)
T 4g9b_A 145 LKN------------------------------------------SKPDPEI--------------FLAACAGLGVPPQA 168 (243)
T ss_dssp CSS------------------------------------------CTTSTHH--------------HHHHHHHHTSCGGG
T ss_pred ccC------------------------------------------CCCcHHH--------------HHHHHHHcCCChHH
Confidence 422 2777776 99999999999999
Q ss_pred EEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcc
Q 017067 320 CFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~ 366 (378)
|+||||+.+||++|+++||++|+|.++.+ .+|.+++++.++
T Consensus 169 ~l~VgDs~~di~aA~~aG~~~I~V~~g~~------~ad~~~~~~~~l 209 (243)
T 4g9b_A 169 CIGIEDAQAGIDAINASGMRSVGIGAGLT------GAQLLLPSTESL 209 (243)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESTTCC------SCSEEESSGGGC
T ss_pred EEEEcCCHHHHHHHHHcCCEEEEECCCCC------cHHHhcCChhhc
Confidence 99999999999999999999999998754 356777777665
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-27 Score=215.44 Aligned_cols=203 Identities=15% Similarity=0.223 Sum_probs=147.1
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
|++|+|+||+||||+|+... +..++.++++++|++. .+...+..+. +..... ....+ + +.+.
T Consensus 2 M~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~---g~~~~~----~~~~~-~----~~~~--- 63 (210)
T 2ah5_A 2 TSITAIFFDLDGTLVDSSIG-IHNAFTYTFKELGVPS--PDAKTIRGFM---GPPLES----SFATC-L----SKDQ--- 63 (210)
T ss_dssp TTCCEEEECSBTTTEECHHH-HHHHHHHHHHHHTCCC--CCHHHHHHTS---SSCHHH----HHHTT-S----CGGG---
T ss_pred CCCCEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHc---CccHHH----HHHHH-c----CHHH---
Confidence 45789999999999999886 7889999999999863 2333332222 221111 22222 1 1121
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
.+.+.+.+.+.+.+.. ....+++||+.++|+.|++ |++++|+|| +....++.+++.+|+..+|+. +++.+ .
T Consensus 64 -~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~-~~~l~i~T~---~~~~~~~~~l~~~gl~~~f~~-i~~~~--~ 134 (210)
T 2ah5_A 64 -ISEAVQIYRSYYKAKG-IYEAQLFPQIIDLLEELSS-SYPLYITTT---KDTSTAQDMAKNLEIHHFFDG-IYGSS--P 134 (210)
T ss_dssp -HHHHHHHHHHHHHHTG-GGSCEECTTHHHHHHHHHT-TSCEEEEEE---EEHHHHHHHHHHTTCGGGCSE-EEEEC--S
T ss_pred -HHHHHHHHHHHHHHhc-cCCCCCCCCHHHHHHHHHc-CCeEEEEeC---CCHHHHHHHHHhcCchhheee-eecCC--C
Confidence 2233333444443321 1235689999999999999 999999999 446778889999999999987 34432 1
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|++ |+.+++++|++|++|+
T Consensus 135 ~------------------------------------------~Kp~p~~--------------~~~~~~~lg~~p~~~~ 158 (210)
T 2ah5_A 135 E------------------------------------------APHKADV--------------IHQALQTHQLAPEQAI 158 (210)
T ss_dssp S------------------------------------------CCSHHHH--------------HHHHHHHTTCCGGGEE
T ss_pred C------------------------------------------CCCChHH--------------HHHHHHHcCCCcccEE
Confidence 1 1666665 9999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCC--CCCcEEecCCCcch
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEF--PSANAVMDGFGGAD 367 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l--~~ad~vi~~l~e~~ 367 (378)
+|||+.+|+++|+++||++|++.++.....++ ..+|++++++.|+.
T Consensus 159 ~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~ 206 (210)
T 2ah5_A 159 IIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVL 206 (210)
T ss_dssp EEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHH
T ss_pred EECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHH
Confidence 99999999999999999999999886644444 35899999999874
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-27 Score=210.37 Aligned_cols=210 Identities=13% Similarity=0.141 Sum_probs=153.5
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
+.+|+|+||+||||+++... +..++.++++++|++ ++...+....+ .........+....+....
T Consensus 3 ~m~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~-------- 67 (214)
T 3e58_A 3 AMVEAIIFDMDGVLFDTEKY-YYDRRASFLGQKGIS---IDHLPPSFFIG---GNTKQVWENILRDEYDKWD-------- 67 (214)
T ss_dssp -CCCEEEEESBTTTBCCHHH-HHHHHHHHHHHTTCC---CTTSCHHHHTT---SCGGGCHHHHHGGGGGGSC--------
T ss_pred ccccEEEEcCCCCccccHHH-HHHHHHHHHHHcCCC---CCHHHHHHHcC---CCHHHHHHHHHHhhcCCCC--------
Confidence 45899999999999999886 778999999999986 44444444432 2233344445555432211
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
...+.+...+.+.+........++||+.++|+.|+++|++++++|| +....++..++.+|+..+|+. +++.+++.
T Consensus 68 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~-~~~~~~~~ 142 (214)
T 3e58_A 68 -VSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASS---SVKADIFRALEENRLQGFFDI-VLSGEEFK 142 (214)
T ss_dssp -HHHHHHHHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCGGGCSE-EEEGGGCS
T ss_pred -HHHHHHHHHHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeC---CcHHHHHHHHHHcCcHhheee-Eeeccccc
Confidence 1233333333333332111236899999999999999999999999 446888999999999999987 44443321
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|.+ |+.+++++|++|++|+
T Consensus 143 ~------------------------------------------~kp~~~~--------------~~~~~~~~~~~~~~~~ 166 (214)
T 3e58_A 143 E------------------------------------------SKPNPEI--------------YLTALKQLNVQASRAL 166 (214)
T ss_dssp S------------------------------------------CTTSSHH--------------HHHHHHHHTCCGGGEE
T ss_pred C------------------------------------------CCCChHH--------------HHHHHHHcCCChHHeE
Confidence 1 1555554 9999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchH
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADL 368 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~ 368 (378)
+|||+.+|+.+|+++|++++++.++...... ..++++++++.|+..
T Consensus 167 ~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~-~~a~~~~~~~~el~~ 212 (214)
T 3e58_A 167 IIEDSEKGIAAGVAADVEVWAIRDNEFGMDQ-SAAKGLLDSLTDVLD 212 (214)
T ss_dssp EEECSHHHHHHHHHTTCEEEEECCSSSCCCC-TTSSEEESSGGGGGG
T ss_pred EEeccHhhHHHHHHCCCEEEEECCCCccchh-ccHHHHHHHHHHHHh
Confidence 9999999999999999999999987544433 679999999999853
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-27 Score=215.13 Aligned_cols=217 Identities=19% Similarity=0.226 Sum_probs=158.0
Q ss_pred CCCCCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCch
Q 017067 78 SQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTN 157 (378)
Q Consensus 78 ~~~~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~ 157 (378)
....+++|+|+||+||||+|+... +..++.++++++|.. ++...+....+ .........+..... ...
T Consensus 13 ~~~~~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~-----~~~ 80 (237)
T 4ex6_A 13 GAPAAADRGVILDLDGTLADTPAA-IATITAEVLAAMGTA---VSRGAILSTVG---RPLPASLAGLLGVPV-----EDP 80 (237)
T ss_dssp ----CCCEEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHHHHHTT---SCHHHHHHHHHTSCT-----TSH
T ss_pred CCCcccCCEEEEcCCCCCcCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhcC---ccHHHHHHHHhCCCC-----CHH
Confidence 344567999999999999999886 788999999999943 55555544442 223333333322111 112
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeec
Q 017067 158 EKKAFVKNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVG 236 (378)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~l~~-~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~ 236 (378)
. +..+.+...+.|.+.+.. ....++||+.++|+.|+++|++++++|| +....++.+++.+|+..+|+. +++
T Consensus 81 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~-~~~ 152 (237)
T 4ex6_A 81 R----VAEATEEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATS---KVEKAARAIAELTGLDTRLTV-IAG 152 (237)
T ss_dssp H----HHHHHHHHHHHHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECS---SCHHHHHHHHHHHTGGGTCSE-EEC
T ss_pred H----HHHHHHHHHHHHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcC---CChHHHHHHHHHcCchhheee-EEe
Confidence 2 344445555555555420 3467999999999999999999999999 446888999999999999987 444
Q ss_pred hhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCC
Q 017067 237 NEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP 316 (378)
Q Consensus 237 ~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~ 316 (378)
.+++.. .||+|.+ |+.+++++|++
T Consensus 153 ~~~~~~------------------------------------------~kp~~~~--------------~~~~~~~lg~~ 176 (237)
T 4ex6_A 153 DDSVER------------------------------------------GKPHPDM--------------ALHVARGLGIP 176 (237)
T ss_dssp TTTSSS------------------------------------------CTTSSHH--------------HHHHHHHHTCC
T ss_pred CCCCCC------------------------------------------CCCCHHH--------------HHHHHHHcCCC
Confidence 433211 1555555 99999999999
Q ss_pred CCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC--CCcEEecCCCcchHHH
Q 017067 317 VRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP--SANAVMDGFGGADLTI 370 (378)
Q Consensus 317 p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~--~ad~vi~~l~e~~~~~ 370 (378)
|++|++|||+.+|+.||+++|+++|+|.++.....++. .||++++++.|+...+
T Consensus 177 ~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 232 (237)
T 4ex6_A 177 PERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAV 232 (237)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHH
T ss_pred HHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 99999999999999999999999999999876544443 5899999999986544
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.1e-27 Score=216.28 Aligned_cols=215 Identities=18% Similarity=0.227 Sum_probs=152.0
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCC-CCCCChhHHHHHHhhccCChHHHHHHHHH-----------HcC
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD-CANWTAPIYTDLLRKSAGDEDRMLVLFFN-----------RIG 149 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~g 149 (378)
|.+|+|+||+||||+|+... +..++.++++++|++ . .+...+...+ +.........+.. +++
T Consensus 2 M~~k~viFDlDGTL~ds~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (240)
T 2hi0_A 2 MKYKAAIFDMDGTILDTSAD-LTSALNYAFEQTGHRHD--FTVEDIKNFF---GSGVVVAVTRALAYEAGSSRESLVAFG 75 (240)
T ss_dssp CSCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTSCCC--CCHHHHHHHC---SSCHHHHHHHHHHHHTTCCHHHHTTTT
T ss_pred CcccEEEEecCCCCccCHHH-HHHHHHHHHHHcCCCCC--CCHHHHHHhc---CccHHHHHHHHHHhccccccccccccc
Confidence 34789999999999999986 889999999999985 2 3334443333 2222222222221 011
Q ss_pred C-----CCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHh
Q 017067 150 W-----PTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 224 (378)
Q Consensus 150 ~-----~~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~l 224 (378)
. ...++ ...++.+.+.+.+.|.+.. ....+++||+.++|+.|+++|++++|+|| +....++.+++.+
T Consensus 76 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~ 147 (240)
T 2hi0_A 76 TKDEQIPEAVT----QTEVNRVLEVFKPYYADHC-QIKTGPFPGILDLMKNLRQKGVKLAVVSN---KPNEAVQVLVEEL 147 (240)
T ss_dssp STTCCCCTTCC----HHHHHHHHHHHHHHHHHTS-SSSCEECTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHH
T ss_pred ccccccCCCCC----HHHHHHHHHHHHHHHHHhh-hhcCCcCCCHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHc
Confidence 0 01111 1123344444445454433 33567899999999999999999999999 4467788999999
Q ss_pred CccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHH
Q 017067 225 GSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVA 304 (378)
Q Consensus 225 gi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~ 304 (378)
|+. +|+. +++.+++.. .||+|++
T Consensus 148 ~l~-~f~~-~~~~~~~~~------------------------------------------~Kp~p~~------------- 170 (240)
T 2hi0_A 148 FPG-SFDF-ALGEKSGIR------------------------------------------RKPAPDM------------- 170 (240)
T ss_dssp STT-TCSE-EEEECTTSC------------------------------------------CTTSSHH-------------
T ss_pred CCc-ceeE-EEecCCCCC------------------------------------------CCCCHHH-------------
Confidence 998 8886 444433211 2666666
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCC--CCCcEEecCCCcchH
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEF--PSANAVMDGFGGADL 368 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l--~~ad~vi~~l~e~~~ 368 (378)
|..+++++|++|++|++|||+.+|+.+|+++||++|++.++.....++ ..++++++++.|+..
T Consensus 171 -~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el~~ 235 (240)
T 2hi0_A 171 -TSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEE 235 (240)
T ss_dssp -HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHHHH
T ss_pred -HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHHHH
Confidence 999999999999999999999999999999999999999886553333 358999999988743
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-26 Score=208.88 Aligned_cols=208 Identities=17% Similarity=0.241 Sum_probs=149.9
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHH
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i 163 (378)
+|+|+||+||||+|+... +..++.++++++|++ ++...+..+. +.........+....+....++.++ +
T Consensus 2 ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~----~ 70 (233)
T 3nas_A 2 LKAVIFDLDGVITDTAEY-HFLAWKHIAEQIDIP---FDRDMNERLK---GISREESLESILIFGGAETKYTNAE----K 70 (233)
T ss_dssp CCEEEECSBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHTT---TCCHHHHHHHHHHHTTCTTTSCHHH----H
T ss_pred CcEEEECCCCCcCCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHc---CCCHHHHHHHHHHHhCCCCCCCHHH----H
Confidence 689999999999999886 788999999999987 4444433332 2334445566667766533333232 3
Q ss_pred HHHHHHHHHHHHHHHhcC-CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 164 KNVLQEKKNALDEFLASK-DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 164 ~~~~~~~~~~~~~~l~~~-~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
..+.+...+.|.+.+... ..+++||+.++|+.|+++|++++|+||.. . +..+++.+|+..+|+. +++.+++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~---~--~~~~l~~~gl~~~f~~-i~~~~~~~~ 144 (233)
T 3nas_A 71 QELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSR---N--APKILRRLAIIDDFHA-IVDPTTLAK 144 (233)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCT---T--HHHHHHHTTCTTTCSE-ECCC-----
T ss_pred HHHHHHHHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCch---h--HHHHHHHcCcHhhcCE-EeeHhhCCC
Confidence 444555555666655322 23489999999999999999999999952 2 7788999999999987 444443321
Q ss_pred hhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017067 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (378)
Q Consensus 243 ~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~ 322 (378)
.||+|++ |+.+++++|++|++|++
T Consensus 145 ------------------------------------------~Kp~~~~--------------~~~~~~~lgi~~~~~i~ 168 (233)
T 3nas_A 145 ------------------------------------------GKPDPDI--------------FLTAAAMLDVSPADCAA 168 (233)
T ss_dssp ----------------------------------------------CCH--------------HHHHHHHHTSCGGGEEE
T ss_pred ------------------------------------------CCCChHH--------------HHHHHHHcCCCHHHEEE
Confidence 2777766 99999999999999999
Q ss_pred EeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchH
Q 017067 323 IAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADL 368 (378)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~ 368 (378)
|||+.+|+.||+++||.+++++++ .++..||+|++++.|+..
T Consensus 169 vGDs~~Di~~a~~aG~~~~~~~~~----~~~~~ad~v~~s~~el~~ 210 (233)
T 3nas_A 169 IEDAEAGISAIKSAGMFAVGVGQG----QPMLGADLVVRQTSDLTL 210 (233)
T ss_dssp EECSHHHHHHHHHTTCEEEECC-----------CSEECSSGGGCCH
T ss_pred EeCCHHHHHHHHHcCCEEEEECCc----cccccCCEEeCChHhCCH
Confidence 999999999999999999999765 344579999999999874
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-26 Score=211.17 Aligned_cols=216 Identities=15% Similarity=0.234 Sum_probs=156.8
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHH-HHHHHcCCCCCCCchhhH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV-LFFNRIGWPTSVPTNEKK 160 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~g~~~~l~~~~~~ 160 (378)
+.+|+|+||+||||+++... +..++.++++++|++ +....+ ....+........ .+...++... +.++
T Consensus 22 ~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~--~~~~-- 90 (243)
T 3qxg_A 22 KKLKAVLFDMDGVLFNSMPY-HSEAWHQVMKTHGLD---LSREEA---YMHEGRTGASTINIVFQRELGKEA--TQEE-- 90 (243)
T ss_dssp CCCCEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHH---HHTTTSCHHHHHHHHHHHHHSSCC--CHHH--
T ss_pred ccCCEEEEcCCCCCCCCHHH-HHHHHHHHHHHhCCC---CCHHHH---HHHhCCCHHHHHHHHHHHHhCCCC--CHHH--
Confidence 46899999999999999886 778999999999987 333322 2222222333333 3334455432 1111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc--hheeechh
Q 017067 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS--KIKIVGNE 238 (378)
Q Consensus 161 ~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f--~~~iv~~~ 238 (378)
+..+.....+.+.. .....++||+.++|+.|+++|++++++||. ....+...++. |+..+| +. +++.+
T Consensus 91 --~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~-~l~~~f~~d~-i~~~~ 160 (243)
T 3qxg_A 91 --IESIYHEKSILFNS---YPEAERMPGAWELLQKVKSEGLTPMVVTGS---GQLSLLERLEH-NFPGMFHKEL-MVTAF 160 (243)
T ss_dssp --HHHHHHHHHHHHHT---SSCCCBCTTHHHHHHHHHHTTCEEEEECCC---CCHHHHTTHHH-HSTTTCCGGG-EECTT
T ss_pred --HHHHHHHHHHHHHh---cccCCCCCCHHHHHHHHHHcCCcEEEEeCC---cHHHHHHHHHH-hHHHhcCcce-EEeHH
Confidence 23333333333222 134679999999999999999999999995 45777778888 999999 76 44443
Q ss_pred hHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCC
Q 017067 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (378)
Q Consensus 239 ~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~ 318 (378)
++.. .||+|++ |+.+++++|++|+
T Consensus 161 ~~~~------------------------------------------~kp~~~~--------------~~~~~~~lg~~~~ 184 (243)
T 3qxg_A 161 DVKY------------------------------------------GKPNPEP--------------YLMALKKGGLKAD 184 (243)
T ss_dssp TCSS------------------------------------------CTTSSHH--------------HHHHHHHTTCCGG
T ss_pred hCCC------------------------------------------CCCChHH--------------HHHHHHHcCCCHH
Confidence 3211 1555555 9999999999999
Q ss_pred cEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCC--CCCcEEecCCCcchHHHHHHh
Q 017067 319 NCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEF--PSANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 319 ~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l--~~ad~vi~~l~e~~~~~~~l~ 374 (378)
+|++|||+.+|+.+|+++||.+|++.++.....++ ..||+|++++.|+...+..|.
T Consensus 185 ~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l~~li 242 (243)
T 3qxg_A 185 EAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSWDTIM 242 (243)
T ss_dssp GEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHHHHHT
T ss_pred HeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999987665554 358999999999988887763
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=213.43 Aligned_cols=211 Identities=19% Similarity=0.276 Sum_probs=157.6
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
+.+|+|+||+||||+|+... +..++.++++++|++ ++...+.... +.........+...++.+..
T Consensus 28 ~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~-------- 92 (250)
T 3l5k_A 28 QPVTHLIFDMDGLLLDTERL-YSVVFQEICNRYDKK---YSWDVKSLVM---GKKALEAAQIIIDVLQLPMS-------- 92 (250)
T ss_dssp CCCSEEEEETBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHT---TCCHHHHHHHHHHHHTCSSC--------
T ss_pred cCCcEEEEcCCCCcCCCHHH-HHHHHHHHHHHhCCC---CCHHHHHHhc---CCCHHHHHHHHHHHhCCCCC--------
Confidence 56899999999999999886 788999999999987 4444433333 33344555666777776432
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH-hCccccchheeechh--
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNE-- 238 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~-lgi~~~f~~~iv~~~-- 238 (378)
...+.+...+.+.+.+ ....++||+.++|+.|+++|++++|+||.. ...+...+.. +|+..+|+. +++.+
T Consensus 93 -~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~---~~~~~~~l~~~~~l~~~f~~-~~~~~~~ 165 (250)
T 3l5k_A 93 -KEELVEESQTKLKEVF--PTAALMPGAEKLIIHLRKHGIPFALATSSR---SASFDMKTSRHKEFFSLFSH-IVLGDDP 165 (250)
T ss_dssp -HHHHHHHHHHHHHHHG--GGCCBCTTHHHHHHHHHHTTCCEEEECSCC---HHHHHHHTTTCHHHHTTSSC-EECTTCT
T ss_pred -HHHHHHHHHHHHHHHh--ccCCCCCCHHHHHHHHHhCCCcEEEEeCCC---HHHHHHHHHhccCHHhheee-EEecchh
Confidence 1233444444555544 236799999999999999999999999943 4555555543 578888876 33333
Q ss_pred hHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCC-
Q 017067 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV- 317 (378)
Q Consensus 239 ~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p- 317 (378)
++. ..||+|++ |+.+++++|++|
T Consensus 166 ~~~------------------------------------------~~Kp~~~~--------------~~~~~~~lgi~~~ 189 (250)
T 3l5k_A 166 EVQ------------------------------------------HGKPDPDI--------------FLACAKRFSPPPA 189 (250)
T ss_dssp TCC------------------------------------------SCTTSTHH--------------HHHHHHTSSSCCC
T ss_pred hcc------------------------------------------CCCCChHH--------------HHHHHHHcCCCCC
Confidence 221 12666555 999999999998
Q ss_pred -CcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHH
Q 017067 318 -RNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTI 370 (378)
Q Consensus 318 -~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~ 370 (378)
++|++|||+.+|+++|+++||.+|++.++.........||+|++++.|+...+
T Consensus 190 ~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~l 243 (250)
T 3l5k_A 190 MEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPEL 243 (250)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGGG
T ss_pred cceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHHH
Confidence 99999999999999999999999999999877666677999999999986543
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-26 Score=208.91 Aligned_cols=217 Identities=15% Similarity=0.203 Sum_probs=154.9
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHH-HHHHHcCCCCCCCchhhH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV-LFFNRIGWPTSVPTNEKK 160 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~g~~~~l~~~~~~ 160 (378)
+++|+|+||+||||+++... +..++.++++++|++ ...... ....+........ .+...++... +.++
T Consensus 21 ~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~--~~~~-- 89 (247)
T 3dv9_A 21 IDLKAVLFDMDGVLFDSMPN-HAESWHKIMKRFGFG---LSREEA---YMHEGRTGASTINIVSRRERGHDA--TEEE-- 89 (247)
T ss_dssp CCCCEEEEESBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHH---HHTTTSCHHHHHHHHHHHHHSSCC--CHHH--
T ss_pred CCCCEEEECCCCccCcCHHH-HHHHHHHHHHHcCCC---CCHHHH---HHHhCCChHHHHHHHHHHhcCCCC--CHHH--
Confidence 56899999999999999886 778999999999987 333222 2222232333222 3334455432 1111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc--hheeechh
Q 017067 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS--KIKIVGNE 238 (378)
Q Consensus 161 ~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f--~~~iv~~~ 238 (378)
+..+.....+.+.. .....++||+.++|+.|+++|++++++||.. ...+...++. |+.++| +. +++.+
T Consensus 90 --~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~---~~~~~~~l~~-~l~~~f~~~~-~~~~~ 159 (247)
T 3dv9_A 90 --IKAIYQAKTEEFNK---CPKAERMPGALEVLTKIKSEGLTPMVVTGSG---QTSLLDRLNH-NFPGIFQANL-MVTAF 159 (247)
T ss_dssp --HHHHHHHHHHHHTT---SCCCCBCTTHHHHHHHHHHTTCEEEEECSCC------CHHHHHH-HSTTTCCGGG-EECGG
T ss_pred --HHHHHHHHHHHHHh---cccCCCCCCHHHHHHHHHHcCCcEEEEcCCc---hHHHHHHHHh-hHHHhcCCCe-EEecc
Confidence 22333332222211 1346799999999999999999999999954 4667778888 999999 76 44443
Q ss_pred hHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCC
Q 017067 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (378)
Q Consensus 239 ~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~ 318 (378)
++.. .||+|++ |+.+++++|++|+
T Consensus 160 ~~~~------------------------------------------~kp~~~~--------------~~~~~~~lg~~~~ 183 (247)
T 3dv9_A 160 DVKY------------------------------------------GKPNPEP--------------YLMALKKGGFKPN 183 (247)
T ss_dssp GCSS------------------------------------------CTTSSHH--------------HHHHHHHHTCCGG
T ss_pred cCCC------------------------------------------CCCCCHH--------------HHHHHHHcCCChh
Confidence 3211 1555555 9999999999999
Q ss_pred cEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCC--CCCcEEecCCCcchHHHHHHhh
Q 017067 319 NCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEF--PSANAVMDGFGGADLTISKLRH 375 (378)
Q Consensus 319 ~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l--~~ad~vi~~l~e~~~~~~~l~~ 375 (378)
+|++|||+.+|+.+|+++||.+|++.++.....++ ..||+|++++.|+...+..++.
T Consensus 184 ~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~ 242 (247)
T 3dv9_A 184 EALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNWETLQS 242 (247)
T ss_dssp GEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHHHHHHH
T ss_pred heEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHHHHHHH
Confidence 99999999999999999999999999987665544 3689999999999888887764
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=6.1e-27 Score=211.53 Aligned_cols=217 Identities=16% Similarity=0.219 Sum_probs=154.4
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHH
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i 163 (378)
+|+|+||+||||+|+... +..++.++++++|.+. .....+.... +..... .+...++++ .+ .+
T Consensus 4 ~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~---g~~~~~---~~~~~~~~~----~~----~~ 66 (226)
T 3mc1_A 4 YNYVLFDLDGTLTDSAEG-ITKSVKYSLNKFDIQV--EDLSSLNKFV---GPPLKT---SFMEYYNFD----EE----TA 66 (226)
T ss_dssp CCEEEECSBTTTBCCHHH-HHHHHHHHHHTTTCCC--SCGGGGGGGS---SSCHHH---HHHHHHCCC----HH----HH
T ss_pred CCEEEEeCCCccccCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHh---CcCHHH---HHHHHhCCC----HH----HH
Confidence 789999999999999876 7788999999999873 2222222222 121122 222333332 11 12
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHh
Q 017067 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (378)
Q Consensus 164 ~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~ 243 (378)
..+...+.+.+.+.. .....++||+.++|+.|+++|++++++|| +....++..++.+|+..+|+. +++.+++..
T Consensus 67 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~- 140 (226)
T 3mc1_A 67 TVAIDYYRDYFKAKG-MFENKVYDGIEALLSSLKDYGFHLVVATS---KPTVFSKQILEHFKLAFYFDA-IVGSSLDGK- 140 (226)
T ss_dssp HHHHHHHHHHHTTTG-GGSCCBCTTHHHHHHHHHHHTCEEEEEEE---EEHHHHHHHHHHTTCGGGCSE-EEEECTTSS-
T ss_pred HHHHHHHHHHHHHhC-cccCccCcCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhCCHhheee-eeccCCCCC-
Confidence 233333333332221 22467999999999999999999999999 456888999999999999987 344433211
Q ss_pred hhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 017067 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (378)
Q Consensus 244 ~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~V 323 (378)
.||+|.+ |+.+++++|++|++|++|
T Consensus 141 -----------------------------------------~kp~~~~--------------~~~~~~~lgi~~~~~i~i 165 (226)
T 3mc1_A 141 -----------------------------------------LSTKEDV--------------IRYAMESLNIKSDDAIMI 165 (226)
T ss_dssp -----------------------------------------SCSHHHH--------------HHHHHHHHTCCGGGEEEE
T ss_pred -----------------------------------------CCCCHHH--------------HHHHHHHhCcCcccEEEE
Confidence 1544444 999999999999999999
Q ss_pred eCCHhHHHHHHHcCCCEEEEcCCCCCCCCC--CCCcEEecCCCcchHHHHHHhhccC
Q 017067 324 AGSQSGVAGAQRIGMPCVVMRSSLTSRAEF--PSANAVMDGFGGADLTISKLRHSQW 378 (378)
Q Consensus 324 GDs~~Di~aA~~aG~~~i~v~~~~~~~~~l--~~ad~vi~~l~e~~~~~~~l~~~~~ 378 (378)
||+.+|+.+|+++|+++|+|.++.....++ ..||++++++.|+...+.....+.|
T Consensus 166 GD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~~~~~~~~~ 222 (226)
T 3mc1_A 166 GDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKILELREGHH 222 (226)
T ss_dssp ESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHHHTC-----
T ss_pred CCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHHHHHhcccc
Confidence 999999999999999999999987776665 5799999999999877776655543
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-26 Score=209.74 Aligned_cols=210 Identities=12% Similarity=0.151 Sum_probs=151.2
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
.+++|+||+||||+|+... +..++.++++++|++. .+...+... .+.........+.. ...
T Consensus 2 ~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~---~g~~~~~~~~~~~~----~~~--------- 62 (222)
T 2nyv_A 2 SLRVILFDLDGTLIDSAKD-IALALEKTLKELGLEE--YYPDNVTKY---IGGGVRALLEKVLK----DKF--------- 62 (222)
T ss_dssp EECEEEECTBTTTEECHHH-HHHHHHHHHHHTTCGG--GCCSCGGGG---CSSCHHHHHHHHHG----GGC---------
T ss_pred CCCEEEECCCCcCCCCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHH---hCcCHHHHHHHHhC----hHH---------
Confidence 4789999999999999886 7788999999999862 222222221 22222223222222 111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
.+.+.+.+.+.|.+.. ....+++||+.++|+.|+++|++++|+||. ....++.+++.+|+..+|+. +++.+++..
T Consensus 63 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~gl~~~f~~-i~~~~~~~~ 137 (222)
T 2nyv_A 63 REEYVEVFRKHYLENP-VVYTKPYPEIPYTLEALKSKGFKLAVVSNK---LEELSKKILDILNLSGYFDL-IVGGDTFGE 137 (222)
T ss_dssp CTHHHHHHHHHHHHCS-CSSCEECTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHTTCGGGCSE-EECTTSSCT
T ss_pred HHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEcCC---CHHHHHHHHHHcCCHHHheE-EEecCcCCC
Confidence 1122333344443322 245779999999999999999999999994 46788899999999999987 444433211
Q ss_pred hhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017067 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (378)
Q Consensus 243 ~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~ 322 (378)
.||+|++ |..+++++|++|++|++
T Consensus 138 ------------------------------------------~Kp~~~~--------------~~~~~~~~~~~~~~~~~ 161 (222)
T 2nyv_A 138 ------------------------------------------KKPSPTP--------------VLKTLEILGEEPEKALI 161 (222)
T ss_dssp ------------------------------------------TCCTTHH--------------HHHHHHHHTCCGGGEEE
T ss_pred ------------------------------------------CCCChHH--------------HHHHHHHhCCCchhEEE
Confidence 1555555 99999999999999999
Q ss_pred EeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHH
Q 017067 323 IAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKL 373 (378)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l 373 (378)
|||+.+|+.+|+++|+.+|++.++...... ..++++++++.++...+..+
T Consensus 162 vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l~~~ 211 (222)
T 2nyv_A 162 VGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLMDNH 211 (222)
T ss_dssp EESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHHHTT
T ss_pred ECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHHHHh
Confidence 999999999999999999999987655444 67899999999986655443
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-26 Score=208.38 Aligned_cols=215 Identities=16% Similarity=0.164 Sum_probs=157.4
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
.+|+|+||+||||+++... +..++.++++++|++ ++...+.... +.........+....+... +.+ .
T Consensus 5 ~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~--~~~----~ 71 (233)
T 3s6j_A 5 PQTSFIFDLDGTLTDSVYQ-NVAAWKEALDAENIP---LAMWRIHRKI---GMSGGLMLKSLSRETGMSI--TDE----Q 71 (233)
T ss_dssp CCCEEEECCBTTTEECHHH-HHHHHHHHHHHTTCC---CCHHHHHHHT---TSCHHHHHHHHHHC----C--CHH----H
T ss_pred cCcEEEEcCCCccccChHH-HHHHHHHHHHHcCCC---CCHHHHHHHc---CCcHHHHHHHHHHhcCCCC--CHH----H
Confidence 5799999999999999886 778899999999987 4444443332 2233444455555554332 111 2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
+..+.+...+.|.+.. ....++||+.++|+.|+++|++++++|| +....++..++.+|+..+|+. +++.+++..
T Consensus 72 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~ 145 (233)
T 3s6j_A 72 AERLSEKHAQAYERLQ--HQIIALPGAVELLETLDKENLKWCIATS---GGIDTATINLKALKLDINKIN-IVTRDDVSY 145 (233)
T ss_dssp HHHHHHHHHHHHHHTG--GGCEECTTHHHHHHHHHHTTCCEEEECS---SCHHHHHHHHHTTTCCTTSSC-EECGGGSSC
T ss_pred HHHHHHHHHHHHHHhh--ccCccCCCHHHHHHHHHHCCCeEEEEeC---CchhhHHHHHHhcchhhhhhe-eeccccCCC
Confidence 3344444444444432 2467899999999999999999999999 446788999999999999987 444433211
Q ss_pred hhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017067 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (378)
Q Consensus 243 ~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~ 322 (378)
.||+|.+ |+.+++++|++|++|++
T Consensus 146 ------------------------------------------~kp~~~~--------------~~~~~~~l~~~~~~~i~ 169 (233)
T 3s6j_A 146 ------------------------------------------GKPDPDL--------------FLAAAKKIGAPIDECLV 169 (233)
T ss_dssp ------------------------------------------CTTSTHH--------------HHHHHHHTTCCGGGEEE
T ss_pred ------------------------------------------CCCChHH--------------HHHHHHHhCCCHHHEEE
Confidence 1555555 99999999999999999
Q ss_pred EeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC--CCcEEecCCCcchHHHHH
Q 017067 323 IAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP--SANAVMDGFGGADLTISK 372 (378)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~--~ad~vi~~l~e~~~~~~~ 372 (378)
|||+.+|+.+|+++|+++|+|.++.....++. .||+|++++.|+...+.+
T Consensus 170 iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l~~ 221 (233)
T 3s6j_A 170 IGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDE 221 (233)
T ss_dssp EESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTGGG
T ss_pred EeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHHHH
Confidence 99999999999999999999998865555443 389999999998655443
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.94 E-value=9.5e-26 Score=209.02 Aligned_cols=215 Identities=15% Similarity=0.144 Sum_probs=159.0
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
+.+|+|+||+||||+|+... +..++.+++.++|++ .....+... ..+.........+...++.... .+.
T Consensus 26 ~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~--~~~--- 94 (259)
T 4eek_A 26 APFDAVLFDLDGVLVESEGI-IAQVWQSVLAERGLH---LDLTEIAMY--FTGQRFDGVLAYLAQQHDFVPP--PDF--- 94 (259)
T ss_dssp CCCSEEEEESBTTTEECHHH-HHHHHHHHHHHTTCC---CCHHHHHHH--TTTCCHHHHHHHHHHHHCCCCC--TTH---
T ss_pred cCCCEEEECCCCCcccCHHH-HHHHHHHHHHHhCCC---CCHHHHHHH--HhCCCHHHHHHHHHHHcCCCCC--HHH---
Confidence 56899999999999999876 788999999999987 332222221 1223344555566666665432 111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
+..+ .+.+.+.+ ....++||+.++|+.|+++|++++|+||. ....++..++.+|+..+|+..+++.+++.
T Consensus 95 -~~~~----~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~i~~~~~~~ 164 (259)
T 4eek_A 95 -LDVL----ETRFNAAM--TGVTAIEGAAETLRALRAAGVPFAIGSNS---ERGRLHLKLRVAGLTELAGEHIYDPSWVG 164 (259)
T ss_dssp -HHHH----HHHHHHHH--TTCEECTTHHHHHHHHHHHTCCEEEECSS---CHHHHHHHHHHTTCHHHHCSCEECGGGGT
T ss_pred -HHHH----HHHHHHHh--ccCCcCccHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHhcChHhhccceEEeHhhcC
Confidence 2222 22333333 45679999999999999999999999994 46788999999999999987344444332
Q ss_pred -HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcE
Q 017067 242 -RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (378)
Q Consensus 242 -~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~ 320 (378)
. .||+|.+ |+.+++++|++|++|
T Consensus 165 ~~------------------------------------------~Kp~~~~--------------~~~~~~~lgi~~~~~ 188 (259)
T 4eek_A 165 GR------------------------------------------GKPHPDL--------------YTFAAQQLGILPERC 188 (259)
T ss_dssp TC------------------------------------------CTTSSHH--------------HHHHHHHTTCCGGGE
T ss_pred cC------------------------------------------CCCChHH--------------HHHHHHHcCCCHHHE
Confidence 1 1666555 999999999999999
Q ss_pred EEEeCCHhHHHHHHHcCCCEEEEcCCCCC----CCCC--CCCcEEecCCCcchHHHHHH
Q 017067 321 FLIAGSQSGVAGAQRIGMPCVVMRSSLTS----RAEF--PSANAVMDGFGGADLTISKL 373 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~~~~----~~~l--~~ad~vi~~l~e~~~~~~~l 373 (378)
++|||+.+|+++|+++|+.+|++.++... .+++ ..||++++++.|+...+...
T Consensus 189 i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~~~ 247 (259)
T 4eek_A 189 VVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAEA 247 (259)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHHHT
T ss_pred EEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHHhc
Confidence 99999999999999999999999877544 2233 34899999999997766653
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-25 Score=206.42 Aligned_cols=217 Identities=13% Similarity=0.128 Sum_probs=154.2
Q ss_pred CCCCCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHH----cCCCCC
Q 017067 78 SQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR----IGWPTS 153 (378)
Q Consensus 78 ~~~~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~g~~~~ 153 (378)
.....++++|+||+||||+|+... +..++.++++++|++. .+...+..+.+ ............. ++. .
T Consensus 17 ~~~~~~~k~iiFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~--~ 88 (243)
T 2hsz_A 17 FQGMTQFKLIGFDLDGTLVNSLPD-LALSINSALKDVNLPQ--ASENLVMTWIG---NGADVLSQRAVDWACKQAEK--E 88 (243)
T ss_dssp --CCSSCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCCC--CCHHHHHHHCS---SCHHHHHHHHHHHHHHHHTC--C
T ss_pred ecCCccCCEEEEcCCCcCCCCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhC---chHHHHHHHHhhhhhccccc--c
Confidence 344566899999999999999886 7788999999999873 44444443332 2222222222211 111 1
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchhe
Q 017067 154 VPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK 233 (378)
Q Consensus 154 l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~ 233 (378)
+..+ .++...+.+.+.|.+.. ....+++||+.++|+.|+++|++++|+||. ....++.+++.+|+..+|+.
T Consensus 89 ~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~gl~~~f~~- 159 (243)
T 2hsz_A 89 LTED----EFKYFKRQFGFYYGENL-CNISRLYPNVKETLEALKAQGYILAVVTNK---PTKHVQPILTAFGIDHLFSE- 159 (243)
T ss_dssp CCHH----HHHHHHHHHHHHHHHHT-TSSCEECTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHTTCGGGCSE-
T ss_pred CCHH----HHHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCEEEEEECC---cHHHHHHHHHHcCchheEEE-
Confidence 1111 12333444445555544 345679999999999999999999999994 46788999999999999887
Q ss_pred eechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHc
Q 017067 234 IVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA 313 (378)
Q Consensus 234 iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~l 313 (378)
+++.+++.. .||+|++ |..+++++
T Consensus 160 ~~~~~~~~~------------------------------------------~Kp~~~~--------------~~~~~~~~ 183 (243)
T 2hsz_A 160 MLGGQSLPE------------------------------------------IKPHPAP--------------FYYLCGKF 183 (243)
T ss_dssp EECTTTSSS------------------------------------------CTTSSHH--------------HHHHHHHH
T ss_pred EEecccCCC------------------------------------------CCcCHHH--------------HHHHHHHh
Confidence 444433211 1555554 99999999
Q ss_pred CCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCC--CCCCcEEecCCCcch
Q 017067 314 EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAE--FPSANAVMDGFGGAD 367 (378)
Q Consensus 314 gv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~--l~~ad~vi~~l~e~~ 367 (378)
|++|++|++|||+.+|+.+|+.+|+.++++.++.....+ ...+|++++++.|+.
T Consensus 184 ~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~ 239 (243)
T 2hsz_A 184 GLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADIL 239 (243)
T ss_dssp TCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGG
T ss_pred CcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHH
Confidence 999999999999999999999999999999987653332 346899999999975
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=5.1e-26 Score=206.18 Aligned_cols=224 Identities=13% Similarity=0.175 Sum_probs=156.5
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHH-cCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQK-LGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~-~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~ 160 (378)
|.+++|+||+||||+|+... +..++.+++.+ +|++. . . ......+.........+...++... ....
T Consensus 2 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~~g~~~---~-~---~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~ 69 (234)
T 2hcf_A 2 MSRTLVLFDIDGTLLKVESM-NRRVLADALIEVYGTEG---S-T---GSHDFSGKMDGAIIYEVLSNVGLER----AEIA 69 (234)
T ss_dssp -CCEEEEECCBTTTEEECTH-HHHHHHHHHHHHHSCCC---C-C------CCTTCCHHHHHHHHHHTTTCCH----HHHH
T ss_pred CcceEEEEcCCCCcccCccc-hHHHHHHHHHHHhCCCC---c-c---chhhhcCCChHHHHHHHHHHcCCCc----ccch
Confidence 35799999999999999986 77888999988 78763 2 1 1122222222333444555555431 0001
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHC-CCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhh
Q 017067 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 239 (378)
Q Consensus 161 ~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~-G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~ 239 (378)
..+..+...+...+.+.+......++||+.++|+.|+++ |++++|+||. ....+...++.+|+.++|+.. +..++
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~-~~~~~ 145 (234)
T 2hcf_A 70 DKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGN---FEASGRHKLKLPGIDHYFPFG-AFADD 145 (234)
T ss_dssp HHHHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSS---CHHHHHHHHHTTTCSTTCSCE-ECTTT
T ss_pred hHHHHHHHHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCC---cHHHHHHHHHHCCchhhcCcc-eecCC
Confidence 112333344444444433213456899999999999999 9999999994 467888999999999999863 33222
Q ss_pred HHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcC--CCC
Q 017067 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPV 317 (378)
Q Consensus 240 ~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lg--v~p 317 (378)
.. +.++|.+.+ |+.+++++| ++|
T Consensus 146 ~~----------------------------------------------------~~~k~~~~~---~~~~~~~lg~~~~~ 170 (234)
T 2hcf_A 146 AL----------------------------------------------------DRNELPHIA---LERARRMTGANYSP 170 (234)
T ss_dssp CS----------------------------------------------------SGGGHHHHH---HHHHHHHHCCCCCG
T ss_pred Cc----------------------------------------------------CccchHHHH---HHHHHHHhCCCCCc
Confidence 10 112233333 999999999 999
Q ss_pred CcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC--CCcEEecCCCcchHHHHHHhhc
Q 017067 318 RNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP--SANAVMDGFGGADLTISKLRHS 376 (378)
Q Consensus 318 ~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~--~ad~vi~~l~e~~~~~~~l~~~ 376 (378)
++|++|||+.+|+.+|+++||.+|++.++......+. .++++++++.|+...+..+..+
T Consensus 171 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el~~~l~~~~~~ 231 (234)
T 2hcf_A 171 SQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASILTP 231 (234)
T ss_dssp GGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHHHHC-
T ss_pred ccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhHHHHHHHHhcc
Confidence 9999999999999999999999999998876554443 3899999999998888877653
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-25 Score=209.30 Aligned_cols=218 Identities=13% Similarity=0.164 Sum_probs=156.7
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhh--------------ccCCh-HH----HHHHH
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRK--------------SAGDE-DR----MLVLF 144 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~--------------~~g~~-~~----~~~~~ 144 (378)
+|+|+||+||||+++... +..++.+++.++|++ ++...+...+.. ..|.. .. .....
T Consensus 1 ik~iiFDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 76 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHP-LGEAYATKARAHGLE---VEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQT 76 (263)
T ss_dssp CCEEEECCBTTTEEESSC-HHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHH
T ss_pred CcEEEEcCCCceeCCCCC-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHH
Confidence 479999999999998875 778999999999997 555444333211 01111 11 12223
Q ss_pred HHHcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHh
Q 017067 145 FNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 224 (378)
Q Consensus 145 ~~~~g~~~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~l 224 (378)
+...+... .+.+.......+..+.....++++||+.++|+.|+++|++++|+||.. . .+..+++.+
T Consensus 77 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~---~-~~~~~l~~~ 142 (263)
T 3k1z_A 77 FHLAGVQD----------AQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFD---R-RLEGILGGL 142 (263)
T ss_dssp HHHTTCCC----------HHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCC---T-THHHHHHHT
T ss_pred HHHcCCCC----------HHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCc---H-HHHHHHHhC
Confidence 33334311 122333344444444432346799999999999999999999999954 3 358899999
Q ss_pred CccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHH
Q 017067 225 GSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVA 304 (378)
Q Consensus 225 gi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~ 304 (378)
|+..+|+. +++.+++.. .||+|++
T Consensus 143 gl~~~f~~-~~~~~~~~~------------------------------------------~Kp~~~~------------- 166 (263)
T 3k1z_A 143 GLREHFDF-VLTSEAAGW------------------------------------------PKPDPRI------------- 166 (263)
T ss_dssp TCGGGCSC-EEEHHHHSS------------------------------------------CTTSHHH-------------
T ss_pred CcHHhhhE-EEeecccCC------------------------------------------CCCCHHH-------------
Confidence 99999987 445444321 2666666
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCC---CCCCCcEEecCCCcchHHHHHHhhc
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRA---EFPSANAVMDGFGGADLTISKLRHS 376 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~---~l~~ad~vi~~l~e~~~~~~~l~~~ 376 (378)
|..+++++|++|++|++|||+. +|+.+|+++||.+|++.++..... ....|+++++++.|+...+..+...
T Consensus 167 -~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l~~~~~~ 241 (263)
T 3k1z_A 167 -FQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPALDCLEGS 241 (263)
T ss_dssp -HHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHHHHHHHC
T ss_pred -HHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHHHHHHhc
Confidence 9999999999999999999997 999999999999999998864432 2235899999999998888877543
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.8e-25 Score=204.78 Aligned_cols=221 Identities=18% Similarity=0.196 Sum_probs=157.9
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCCh----------HHHHHHHHHHcCCC
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE----------DRMLVLFFNRIGWP 151 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~----------~~~~~~~~~~~g~~ 151 (378)
+.+|+|+||+||||+++.......++.+++.++|++ ++...+.... +... ......+...++..
T Consensus 12 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (277)
T 3iru_A 12 GPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIE---VTQAEAREPM---GTEKSEHIRRMLGNSRIANAWLSIKGQA 85 (277)
T ss_dssp CCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCC---CCHHHHHTTT---TSCHHHHHHHHTTSHHHHHHHHHHHSSC
T ss_pred ccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCC---CCHHHHHHHh---cCchHHHHHHhccchHHHHHHHHHhccC
Confidence 458999999999999988752268899999999987 3333332222 1111 11222333444433
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc-c
Q 017067 152 TSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI-S 230 (378)
Q Consensus 152 ~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~-f 230 (378)
. ..+ .+..+...+.+.+.+.+. ....++||+.++|+.|+++|++++++||. .......+++.+|+..+ |
T Consensus 86 ~--~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~tn~---~~~~~~~~l~~~~~~~~~~ 155 (277)
T 3iru_A 86 S--NEE----DIKRLYDLFAPIQTRIVA-QRSQLIPGWKEVFDKLIAQGIKVGGNTGY---GPGMMAPALIAAKEQGYTP 155 (277)
T ss_dssp C--CHH----HHHHHHHHHHHHHHHHHH-HTCCBCTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHHHHTTCCC
T ss_pred C--CHH----HHHHHHHHHHHHHHHHhh-ccCccCcCHHHHHHHHHHcCCeEEEEeCC---chHHHHHHHHhcCcccCCC
Confidence 1 112 234444555555555442 24679999999999999999999999994 46788899999998887 6
Q ss_pred hheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHH
Q 017067 231 KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGA 310 (378)
Q Consensus 231 ~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~ 310 (378)
+. +++.+++.. .||+|.+ |+.++
T Consensus 156 ~~-~~~~~~~~~------------------------------------------~kp~~~~--------------~~~~~ 178 (277)
T 3iru_A 156 AS-TVFATDVVR------------------------------------------GRPFPDM--------------ALKVA 178 (277)
T ss_dssp SE-EECGGGSSS------------------------------------------CTTSSHH--------------HHHHH
T ss_pred ce-EecHHhcCC------------------------------------------CCCCHHH--------------HHHHH
Confidence 66 444433211 1555555 99999
Q ss_pred HHcCCCC-CcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCC-----------------------CCCC--CCCcEEecCCC
Q 017067 311 EYAEKPV-RNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTS-----------------------RAEF--PSANAVMDGFG 364 (378)
Q Consensus 311 ~~lgv~p-~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~-----------------------~~~l--~~ad~vi~~l~ 364 (378)
+++|++| ++|++|||+.+||.+|+++||++|+|.++... ..++ ..||+|++++.
T Consensus 179 ~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~~~~ 258 (277)
T 3iru_A 179 LELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVA 258 (277)
T ss_dssp HHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEESSGG
T ss_pred HHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEecCHH
Confidence 9999999 99999999999999999999999999998641 2222 34899999999
Q ss_pred cchHHHHHHhh
Q 017067 365 GADLTISKLRH 375 (378)
Q Consensus 365 e~~~~~~~l~~ 375 (378)
|+...+..+..
T Consensus 259 el~~~l~~~~~ 269 (277)
T 3iru_A 259 DLETVITDVNR 269 (277)
T ss_dssp GTHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99888877654
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.93 E-value=6.4e-25 Score=199.14 Aligned_cols=211 Identities=14% Similarity=0.143 Sum_probs=152.0
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhc--------cCC--hHH----HHHHHHHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS--------AGD--EDR----MLVLFFNR 147 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~--------~g~--~~~----~~~~~~~~ 147 (378)
+++|+|+||+||||+|+... +..++.++++++|++ ........+.... .+. ... ....+...
T Consensus 5 m~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (238)
T 3ed5_A 5 KRYRTLLFDVDDTILDFQAA-EALALRLLFEDQNIP---LTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKE 80 (238)
T ss_dssp CCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred ccCCEEEEcCcCcCcCCchh-HHHHHHHHHHHcCCC---cchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 46899999999999999886 778999999999987 3332222221110 000 000 11122333
Q ss_pred cCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc
Q 017067 148 IGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (378)
Q Consensus 148 ~g~~~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~ 227 (378)
.+.+.. .....+.|.+.+ .....++||+.++|+.|+++ ++++++||. ....+...++.+|+.
T Consensus 81 ~~~~~~-------------~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~---~~~~~~~~l~~~~l~ 142 (238)
T 3ed5_A 81 YGYEAD-------------GALLEQKYRRFL-EEGHQLIDGAFDLISNLQQQ-FDLYIVTNG---VSHTQYKRLRDSGLF 142 (238)
T ss_dssp TTCCCC-------------HHHHHHHHHHHH-TTCCCBCTTHHHHHHHHHTT-SEEEEEECS---CHHHHHHHHHHTTCG
T ss_pred cCCCCc-------------HHHHHHHHHHHH-HhcCCCCccHHHHHHHHHhc-CeEEEEeCC---CHHHHHHHHHHcChH
Confidence 333311 022334454544 33477999999999999999 999999994 467888999999999
Q ss_pred ccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHH
Q 017067 228 RISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALR 307 (378)
Q Consensus 228 ~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~ 307 (378)
.+|+.. ++.+++.. .||+|.+ |+
T Consensus 143 ~~f~~~-~~~~~~~~------------------------------------------~kp~~~~--------------~~ 165 (238)
T 3ed5_A 143 PFFKDI-FVSEDTGF------------------------------------------QKPMKEY--------------FN 165 (238)
T ss_dssp GGCSEE-EEGGGTTS------------------------------------------CTTCHHH--------------HH
T ss_pred hhhheE-EEecccCC------------------------------------------CCCChHH--------------HH
Confidence 999873 44433211 2555555 99
Q ss_pred HHHHHcC-CCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHH
Q 017067 308 AGAEYAE-KPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTIS 371 (378)
Q Consensus 308 ~a~~~lg-v~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~ 371 (378)
.+++++| ++|++|++|||+. +|+.+|+++|+++|++.++.........||++++++.|+...+.
T Consensus 166 ~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l~ 231 (238)
T 3ed5_A 166 YVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHILN 231 (238)
T ss_dssp HHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHHT
T ss_pred HHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHHH
Confidence 9999999 9999999999998 99999999999999999886555555679999999999865543
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=7.5e-26 Score=202.82 Aligned_cols=205 Identities=12% Similarity=0.108 Sum_probs=149.4
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
|++++|+||+||||+|+... +..++.+++.++|++ ++...+....+ ..... +..++++.. .+
T Consensus 2 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g---~~~~~----~~~~~~~~~----~~--- 63 (209)
T 2hdo_A 2 MTYQALMFDIDGTLTNSQPA-YTTVMREVLATYGKP---FSPAQAQKTFP---MAAEQ----AMTELGIAA----SE--- 63 (209)
T ss_dssp CCCSEEEECSBTTTEECHHH-HHHHHHHHHHTTTCC---CCHHHHHHHTT---SCHHH----HHHHTTCCG----GG---
T ss_pred CcccEEEEcCCCCCcCCHHH-HHHHHHHHHHHhCCC---CCHHHHHHHcC---CcHHH----HHHHcCCCH----HH---
Confidence 45789999999999999886 778899999999885 45444444432 12222 233444331 11
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
+........+.+.. . ....+++||+.++|+.|+++ ++++|+||. ....++.+++.+|+..+|+. +++.++..
T Consensus 64 -~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~-~~~~~~~~ 135 (209)
T 2hdo_A 64 -FDHFQAQYEDVMAS-H-YDQIELYPGITSLFEQLPSE-LRLGIVTSQ---RRNELESGMRSYPFMMRMAV-TISADDTP 135 (209)
T ss_dssp -HHHHHHHHHHHHTT-C-GGGCEECTTHHHHHHHSCTT-SEEEEECSS---CHHHHHHHHTTSGGGGGEEE-EECGGGSS
T ss_pred -HHHHHHHHHHHHhh-h-cccCCcCCCHHHHHHHHHhc-CcEEEEeCC---CHHHHHHHHHHcChHhhccE-EEecCcCC
Confidence 11222222222211 1 13467899999999999999 999999994 46788899999999999887 44443321
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
..||+|.+ |+.+++++|++|++|+
T Consensus 136 ------------------------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~i 159 (209)
T 2hdo_A 136 ------------------------------------------KRKPDPLP--------------LLTALEKVNVAPQNAL 159 (209)
T ss_dssp ------------------------------------------CCTTSSHH--------------HHHHHHHTTCCGGGEE
T ss_pred ------------------------------------------CCCCCcHH--------------HHHHHHHcCCCcccEE
Confidence 12666555 9999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchH
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADL 368 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~ 368 (378)
+|||+.+|+.+|+.+|+.+++++++......+..|+++++++.|+..
T Consensus 160 ~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~a~~~~~~~~el~~ 206 (209)
T 2hdo_A 160 FIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILE 206 (209)
T ss_dssp EEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGG
T ss_pred EECCChhhHHHHHHcCCeEEEEcCCCCChhhhccCCEEeCCHHHHHH
Confidence 99999999999999999999999776655556559999999999853
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=204.56 Aligned_cols=214 Identities=14% Similarity=0.133 Sum_probs=147.9
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcC---CCCCCCChh-HHHHHHhh---ccCChHHHHHHHHHHc-CCCCCCC
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLG---LDCANWTAP-IYTDLLRK---SAGDEDRMLVLFFNRI-GWPTSVP 155 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~g---l~~~~~~~~-~~~~~~~~---~~g~~~~~~~~~~~~~-g~~~~l~ 155 (378)
+++|+||+||||+|+... +..++.+++.+++ +. .... .+..+... ...........+...+ +...
T Consensus 2 ~k~iiFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--- 74 (241)
T 2hoq_A 2 VKVIFFDLDDTLVDTSKL-AEIARKNAIENMIRHGLP---VDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYN--- 74 (241)
T ss_dssp CCEEEECSBTTTBCHHHH-HHHHHHHHHHHHHHTTCC---SCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCC---
T ss_pred ccEEEEcCCCCCCCChhh-HHHHHHHHHHHHHHcccc---ccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCcc---
Confidence 689999999999999886 6778888888764 33 2322 22222111 0001111233344444 4331
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheee
Q 017067 156 TNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIV 235 (378)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv 235 (378)
.+ .+ ....+.|.+.+. ....++||+.++|+.|+++|++++|+||. ....+...++.+|+..+|+. ++
T Consensus 75 -~~---~~----~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~-~~ 141 (241)
T 2hoq_A 75 -PK---WI----SAGVIAYHNTKF-AYLREVPGARKVLIRLKELGYELGIITDG---NPVKQWEKILRLELDDFFEH-VI 141 (241)
T ss_dssp -HH---HH----HHHHHHHHHHHH-HHCCBCTTHHHHHHHHHHHTCEEEEEECS---CHHHHHHHHHHTTCGGGCSE-EE
T ss_pred -ch---HH----HHHHHHHHHHHH-hhCCCCccHHHHHHHHHHCCCEEEEEECC---CchhHHHHHHHcCcHhhccE-EE
Confidence 10 11 222233333321 12468999999999999999999999994 46788899999999999987 34
Q ss_pred chhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCC
Q 017067 236 GNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK 315 (378)
Q Consensus 236 ~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv 315 (378)
+.+++.. .||+|++ |+.+++++|+
T Consensus 142 ~~~~~~~------------------------------------------~Kp~~~~--------------~~~~~~~~g~ 165 (241)
T 2hoq_A 142 ISDFEGV------------------------------------------KKPHPKI--------------FKKALKAFNV 165 (241)
T ss_dssp EGGGGTC------------------------------------------CTTCHHH--------------HHHHHHHHTC
T ss_pred EeCCCCC------------------------------------------CCCCHHH--------------HHHHHHHcCC
Confidence 4433311 2555555 9999999999
Q ss_pred CCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCC---CCcEEecCCCcchHHHHHH
Q 017067 316 PVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFP---SANAVMDGFGGADLTISKL 373 (378)
Q Consensus 316 ~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~---~ad~vi~~l~e~~~~~~~l 373 (378)
+|++|++|||+. +|+.+|+++||.++++.++......+. .+|++++++.|+...+..+
T Consensus 166 ~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~l~~~ 227 (241)
T 2hoq_A 166 KPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESLLEVLARE 227 (241)
T ss_dssp CGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHHHHHHHHC
T ss_pred CcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHHHHHHHHH
Confidence 999999999998 999999999999999987765544443 6899999999987665543
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.2e-25 Score=198.52 Aligned_cols=216 Identities=12% Similarity=0.054 Sum_probs=148.2
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhh----------ccCChH---HHHHHHHHHcCC
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRK----------SAGDED---RMLVLFFNRIGW 150 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~----------~~g~~~---~~~~~~~~~~g~ 150 (378)
+|+|+||+||||+|+... +..++.++++++|++. .......+... .+.... .....+...++.
T Consensus 4 ~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 79 (235)
T 2om6_A 4 VKLVTFDVWNTLLDLNIM-LDEFSHQLAKISGLHI---KDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKV 79 (235)
T ss_dssp CCEEEECCBTTTBCHHHH-HHHHHHHHHHHHTCCH---HHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHTC
T ss_pred ceEEEEeCCCCCCCcchh-HHHHHHHHHHHcCCCC---cHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhCC
Confidence 689999999999998876 6788899999998862 21111111110 011112 233344444443
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc
Q 017067 151 PTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (378)
Q Consensus 151 ~~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f 230 (378)
.. +. ...+ .+.+.+.+ .. ..++|++.++|+.|+++|++++++||...-........++.+|+..+|
T Consensus 80 ~~----~~----~~~~----~~~~~~~~-~~-~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f 145 (235)
T 2om6_A 80 DV----EL----VKRA----TARAILNV-DE-SLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI 145 (235)
T ss_dssp CH----HH----HHHH----HHHHHHHC-CG-GGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC
T ss_pred CH----HH----HHHH----HHHHHHhc-cc-cCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh
Confidence 31 00 1111 12222322 11 236999999999999999999999994300057778899999999999
Q ss_pred hheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHH
Q 017067 231 KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGA 310 (378)
Q Consensus 231 ~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~ 310 (378)
+. +++.+++.. .||+|++ |..++
T Consensus 146 ~~-~~~~~~~~~------------------------------------------~kp~~~~--------------~~~~~ 168 (235)
T 2om6_A 146 DK-TFFADEVLS------------------------------------------YKPRKEM--------------FEKVL 168 (235)
T ss_dssp SE-EEEHHHHTC------------------------------------------CTTCHHH--------------HHHHH
T ss_pred hh-heeccccCC------------------------------------------CCCCHHH--------------HHHHH
Confidence 87 444433321 2555555 99999
Q ss_pred HHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHHh
Q 017067 311 EYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 311 ~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l~ 374 (378)
+++|++|++|++|||+. ||+++|+.+|+.+++++++.........++++++++.|+...+..+.
T Consensus 169 ~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 233 (235)
T 2om6_A 169 NSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDVIELIS 233 (235)
T ss_dssp HHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHHHHHTC
T ss_pred HHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHHHHHHh
Confidence 99999999999999999 99999999999999999884333333458999999999977776654
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=204.29 Aligned_cols=208 Identities=12% Similarity=0.175 Sum_probs=153.4
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
.+|+|+||+||||+++... +..++.+++.++|++ ++...+.... +... ...+...++++ .+ .
T Consensus 28 mik~iifDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~----g~~~--~~~~~~~~~~~----~~----~ 89 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEG-ITKSIQYSLNSFGIK---EDLENLDQFI----GPPL--HDTFKEYYKFE----DK----K 89 (240)
T ss_dssp CCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCC---CCGGGGGGGS----SSCH--HHHHHHTSCCC----HH----H
T ss_pred hccEEEEecCCcCccCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHh----CccH--HHHHHHHhCCC----HH----H
Confidence 4699999999999999876 778999999999987 3433332222 1111 11233333332 11 1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
+......+.+.+.+.. .....++||+.++|+.|+++|++++++|| +....++.+++.+|+..+|+.. ++.++...
T Consensus 90 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~~ 164 (240)
T 3sd7_A 90 AKEAVEKYREYFADKG-IFENKIYENMKEILEMLYKNGKILLVATS---KPTVFAETILRYFDIDRYFKYI-AGSNLDGT 164 (240)
T ss_dssp HHHHHHHHHHHHHHTG-GGCCEECTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCGGGCSEE-EEECTTSC
T ss_pred HHHHHHHHHHHHHHhc-ccccccCccHHHHHHHHHHCCCeEEEEeC---CcHHHHHHHHHHcCcHhhEEEE-EeccccCC
Confidence 3333444444444422 23467999999999999999999999999 4568889999999999999873 33332211
Q ss_pred hhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCC-CCcEE
Q 017067 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCF 321 (378)
Q Consensus 243 ~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~-p~~~i 321 (378)
.||+|.+ |..+++++|++ |++|+
T Consensus 165 ------------------------------------------~kp~~~~--------------~~~~~~~~g~~~~~~~i 188 (240)
T 3sd7_A 165 ------------------------------------------RVNKNEV--------------IQYVLDLCNVKDKDKVI 188 (240)
T ss_dssp ------------------------------------------CCCHHHH--------------HHHHHHHHTCCCGGGEE
T ss_pred ------------------------------------------CCCCHHH--------------HHHHHHHcCCCCCCcEE
Confidence 1555444 99999999999 99999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCC--CCCcEEecCCCcchHH
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEF--PSANAVMDGFGGADLT 369 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l--~~ad~vi~~l~e~~~~ 369 (378)
+|||+.+|+.+|+++|+++|++.++.....++ ..||++++++.|+...
T Consensus 189 ~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~ 238 (240)
T 3sd7_A 189 MVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDI 238 (240)
T ss_dssp EEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHH
T ss_pred EECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHH
Confidence 99999999999999999999999887776666 5799999999998543
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.8e-25 Score=198.86 Aligned_cols=212 Identities=14% Similarity=0.178 Sum_probs=151.7
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhcc---------C--ChHH----HHHHHHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSA---------G--DEDR----MLVLFFN 146 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~---------g--~~~~----~~~~~~~ 146 (378)
|.+|+|+||+||||+|+... +..++.++++++|++....+...+...+.... + .... ....+..
T Consensus 3 m~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (240)
T 3qnm_A 3 LKYKNLFFDLDDTIWAFSRN-ARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQ 81 (240)
T ss_dssp CCCSEEEECCBTTTBCHHHH-HHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCCcCchhh-HHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999886 77889999999998621113333332221100 0 0001 1223344
Q ss_pred HcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCc
Q 017067 147 RIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (378)
Q Consensus 147 ~~g~~~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi 226 (378)
..+++ . ........+.|.+.+ .....++||+.++|+.|+ +|++++++|| +........++.+|+
T Consensus 82 ~~~~~---~--------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~-~g~~~~i~sn---~~~~~~~~~l~~~~l 145 (240)
T 3qnm_A 82 AVGVE---D--------EALAERFSEDFFAII-PTKSGLMPHAKEVLEYLA-PQYNLYILSN---GFRELQSRKMRSAGV 145 (240)
T ss_dssp HTTCC---C--------HHHHHHHHHHHHHHG-GGCCCBSTTHHHHHHHHT-TTSEEEEEEC---SCHHHHHHHHHHHTC
T ss_pred HcCCC---c--------HHHHHHHHHHHHHHh-hhcCCcCccHHHHHHHHH-cCCeEEEEeC---CchHHHHHHHHHcCh
Confidence 44543 1 123344444555544 234679999999999999 9999999999 446888899999999
Q ss_pred cccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHH
Q 017067 227 ERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAAL 306 (378)
Q Consensus 227 ~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~ 306 (378)
..+|+.. ++.+++.. .||+|.+ |
T Consensus 146 ~~~f~~~-~~~~~~~~------------------------------------------~kp~~~~--------------~ 168 (240)
T 3qnm_A 146 DRYFKKI-ILSEDLGV------------------------------------------LKPRPEI--------------F 168 (240)
T ss_dssp GGGCSEE-EEGGGTTC------------------------------------------CTTSHHH--------------H
T ss_pred HhhceeE-EEeccCCC------------------------------------------CCCCHHH--------------H
Confidence 9999873 44433211 1555554 9
Q ss_pred HHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchH
Q 017067 307 RAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADL 368 (378)
Q Consensus 307 ~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~ 368 (378)
+.+++++|++|++|++|||+. +|+++|+++|+.+++++.+.. ......||++++++.|+..
T Consensus 169 ~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~-~~~~~~~d~vi~sl~e~~~ 230 (240)
T 3qnm_A 169 HFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTER-TVFPFQPTYHIHSLKELMN 230 (240)
T ss_dssp HHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCC-CCCSSCCSEEESSTHHHHH
T ss_pred HHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCC-CCcCCCCceEECCHHHHHH
Confidence 999999999999999999995 999999999999999998865 3344568999999999864
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-25 Score=200.55 Aligned_cols=206 Identities=15% Similarity=0.139 Sum_probs=145.5
Q ss_pred CCccEEEEecccccccccccchHHHH-HHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAF-NVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~-~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~ 160 (378)
+.+++|+||+||||+|+... +..++ .++++++|++...+ ....+.. ....+....+..
T Consensus 23 ~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~~g~~~~~~---------~~~~g~~--~~~~~~~~~~~~--------- 81 (231)
T 3kzx_A 23 KQPTAVIFDWYNTLIDTSIN-IDRTTFYQVLDQMGYKNIDL---------DSIPNST--IPKYLITLLGKR--------- 81 (231)
T ss_dssp CCCSEEEECTBTTTEETTSS-CCHHHHHHHHHHTTCCCCCC---------TTSCTTT--HHHHHHHHHGGG---------
T ss_pred CCCCEEEECCCCCCcCCchh-HHHHHHHHHHHHcCCCHHHH---------HHHhCcc--HHHHHHHHhCch---------
Confidence 46899999999999999875 56777 99999999873111 1111111 111222222100
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhH
Q 017067 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (378)
Q Consensus 161 ~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~ 240 (378)
.......+.+.+..........++||+.++|+.|+++|++++++|| +....+...++.+|+..+|+.. ++.+++
T Consensus 82 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~f~~i-~~~~~~ 155 (231)
T 3kzx_A 82 --WKEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSN---KNGERLRSEIHHKNLTHYFDSI-IGSGDT 155 (231)
T ss_dssp --HHHHHHHHHHHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCGGGCSEE-EEETSS
T ss_pred --HHHHHHHHHHHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEEC---CCHHHHHHHHHHCCchhheeeE-Eccccc
Confidence 1122222223222111134577999999999999999999999999 4568889999999999999873 443332
Q ss_pred HHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCC-c
Q 017067 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR-N 319 (378)
Q Consensus 241 ~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~-~ 319 (378)
.. .||+|++ |+.+++++|++|+ +
T Consensus 156 ~~------------------------------------------~Kp~~~~--------------~~~~~~~lgi~~~~~ 179 (231)
T 3kzx_A 156 GT------------------------------------------IKPSPEP--------------VLAALTNINIEPSKE 179 (231)
T ss_dssp SC------------------------------------------CTTSSHH--------------HHHHHHHHTCCCSTT
T ss_pred CC------------------------------------------CCCChHH--------------HHHHHHHcCCCcccC
Confidence 11 2665555 9999999999999 9
Q ss_pred EEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHHhh
Q 017067 320 CFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKLRH 375 (378)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l~~ 375 (378)
|++|||+.+|+++|+++|+.+|++.++.. ..++++++++.|+...+.++..
T Consensus 180 ~v~vGD~~~Di~~a~~aG~~~v~~~~~~~-----~~~~~~~~~~~el~~~l~~~l~ 230 (231)
T 3kzx_A 180 VFFIGDSISDIQSAIEAGCLPIKYGSTNI-----IKDILSFKNFYDIRNFICQLIN 230 (231)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEEECC----------CCEEESSHHHHHHHHHHHHC
T ss_pred EEEEcCCHHHHHHHHHCCCeEEEECCCCC-----CCCceeeCCHHHHHHHHHHHhc
Confidence 99999999999999999999999976633 3578999999999888887754
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=202.43 Aligned_cols=221 Identities=13% Similarity=0.120 Sum_probs=145.2
Q ss_pred CCCCCCccEEEEecccccccccccchHHHHHHHHHH----cCCCCCCCCh-hHHHHHHhhccC--------ChHHHH---
Q 017067 78 SQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQK----LGLDCANWTA-PIYTDLLRKSAG--------DEDRML--- 141 (378)
Q Consensus 78 ~~~~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~----~gl~~~~~~~-~~~~~~~~~~~g--------~~~~~~--- 141 (378)
+...+++++|+||+||||+|+... +..++++++++ +|++. +. ..+........+ ....+.
T Consensus 12 ~~~~~~~k~viFDlDGTLvds~~~-~~~a~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (260)
T 2gfh_A 12 HMGLSRVRAVFFDLDNTLIDTAGA-SRRGMLEVIKLLQSKYHYKE---EAEIICDKVQVKLSKECFHPYSTCITDVRTSH 87 (260)
T ss_dssp CEECCCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHHHHTTCCCT---HHHHHHHHHHHHHHTCCCC----CHHHHHHHH
T ss_pred hcccccceEEEEcCCCCCCCCHHH-HHHHHHHHHHHHHHhcCCcH---HHHHHHHHHHHHHHhhccccccccHHHHHHHH
Confidence 345567899999999999999986 77888888764 55541 11 111111111100 011110
Q ss_pred --HHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHH
Q 017067 142 --VLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARS 219 (378)
Q Consensus 142 --~~~~~~~g~~~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~ 219 (378)
..+....+.. . . . .......+.|.+.. ....+++||+.++|+.|++ +++++|+||+ ....++.
T Consensus 88 ~~~~~~~~~~~~-~-~----~----~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~---~~~~~~~ 152 (260)
T 2gfh_A 88 WEEAIQETKGGA-D-N----R----KLAEECYFLWKSTR-LQHMILADDVKAMLTELRK-EVRLLLLTNG---DRQTQRE 152 (260)
T ss_dssp HHHHHHHHHCSS-C-C----H----HHHHHHHHHHHHHH-HHTCCCCHHHHHHHHHHHT-TSEEEEEECS---CHHHHHH
T ss_pred HHHHHHHhcCcc-c-h----H----HHHHHHHHHHHHHH-HhcCCCCcCHHHHHHHHHc-CCcEEEEECc---ChHHHHH
Confidence 0111111111 0 0 0 11112222232222 1246799999999999998 5999999994 4678889
Q ss_pred HHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchh
Q 017067 220 VVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESL 299 (378)
Q Consensus 220 ~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~ 299 (378)
+++.+|+..+|+.. ++.+++.. .||+|++
T Consensus 153 ~l~~~gl~~~f~~i-~~~~~~~~------------------------------------------~KP~p~~-------- 181 (260)
T 2gfh_A 153 KIEACACQSYFDAI-VIGGEQKE------------------------------------------EKPAPSI-------- 181 (260)
T ss_dssp HHHHHTCGGGCSEE-EEGGGSSS------------------------------------------CTTCHHH--------
T ss_pred HHHhcCHHhhhheE-EecCCCCC------------------------------------------CCCCHHH--------
Confidence 99999999999874 44433311 2666666
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEeCC-HhHHHHHHHcCC-CEEEEcCCCCCCC-CCCCCcEEecCCCcchHHHHHHh
Q 017067 300 DKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGM-PCVVMRSSLTSRA-EFPSANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 300 ~~~~~a~~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~-~~i~v~~~~~~~~-~l~~ad~vi~~l~e~~~~~~~l~ 374 (378)
|+.+++++|++|++|+||||+ .+|+++|+++|| .+|++.++..... ....++++++++.|+...+..+.
T Consensus 182 ------~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~l~~~~ 253 (260)
T 2gfh_A 182 ------FYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSID 253 (260)
T ss_dssp ------HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHHHT
T ss_pred ------HHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHHHHHHHHh
Confidence 999999999999999999995 899999999999 7999976533322 23458999999999977666654
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-24 Score=192.76 Aligned_cols=216 Identities=15% Similarity=0.159 Sum_probs=148.5
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
|.+|+|+||+||||+++... +..++.++++++|.+. .+...+... .+.........+ .+.. . ..
T Consensus 4 M~~k~v~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~---~g~~~~~~~~~~---~~~~---~----~~ 67 (225)
T 3d6j_A 4 MKYTVYLFDFDYTLADSSRG-IVTCFRSVLERHGYTG--ITDDMIKRT---IGKTLEESFSIL---TGIT---D----AD 67 (225)
T ss_dssp -CCSEEEECCBTTTEECHHH-HHHHHHHHHHHTTCCC--CCHHHHHTT---TTSCHHHHHHHH---HCCC---C----HH
T ss_pred CCCCEEEEeCCCCCCCCHHH-HHHHHHHHHHHhCCCC--CCHHHHHHH---hCCcHHHHHHHH---cCCC---C----HH
Confidence 55799999999999999876 7788899999998862 333333222 222222222222 2221 1 11
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
.+..+.......+.+.+ .....+.|++.++++.|+++|++++++||. ........++.+|+..+|+. +++.++..
T Consensus 68 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 142 (225)
T 3d6j_A 68 QLESFRQEYSKEADIYM-NANTILFPDTLPTLTHLKKQGIRIGIISTK---YRFRILSFLRNHMPDDWFDI-IIGGEDVT 142 (225)
T ss_dssp HHHHHHHHHHHHHHHHT-GGGCEECTTHHHHHHHHHHHTCEEEEECSS---CHHHHHHHHHTSSCTTCCSE-EECGGGCS
T ss_pred HHHHHHHHHHHHHHHhc-cccCccCcCHHHHHHHHHHCCCeEEEEECC---CHHHHHHHHHHcCchhheee-eeehhhcC
Confidence 12333344444444444 234568999999999999999999999994 46778888999999888876 33332221
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||.+.+ |..+++++|++|++|+
T Consensus 143 ~------------------------------------------~k~~~~~--------------~~~~~~~~~~~~~~~i 166 (225)
T 3d6j_A 143 H------------------------------------------HKPDPEG--------------LLLAIDRLKACPEEVL 166 (225)
T ss_dssp S------------------------------------------CTTSTHH--------------HHHHHHHTTCCGGGEE
T ss_pred C------------------------------------------CCCChHH--------------HHHHHHHhCCChHHeE
Confidence 0 1444444 8999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC--CCcEEecCCCcchHHHHHHh
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP--SANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~--~ad~vi~~l~e~~~~~~~l~ 374 (378)
+|||+.+|+.||+.+|+.++++.++.....++. .||+|++++.|+...+..+.
T Consensus 167 ~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~ 221 (225)
T 3d6j_A 167 YIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDKS 221 (225)
T ss_dssp EEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC-------
T ss_pred EEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHHHhhhhhc
Confidence 999999999999999999999998876655554 38999999999977666543
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.9e-24 Score=193.50 Aligned_cols=211 Identities=12% Similarity=0.076 Sum_probs=146.5
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhcc---------CC----hHHHHHHHHHHc
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSA---------GD----EDRMLVLFFNRI 148 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~---------g~----~~~~~~~~~~~~ 148 (378)
+.+|+|+||+||||+|+... +..++.++++++|++ .+...+...+.... .. .......+..+.
T Consensus 4 ~~~k~i~fD~DGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (240)
T 3smv_A 4 TDFKALTFDCYGTLIDWETG-IVNALQPLAKRTGKT---FTSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEW 79 (240)
T ss_dssp GGCSEEEECCBTTTBCHHHH-HHHHTHHHHHHHTCC---CCHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHT
T ss_pred ccceEEEEeCCCcCcCCchh-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHh
Confidence 45899999999999999886 778899999999987 44444433332110 00 011223344455
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 149 GWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 149 g~~~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
+.+.. . . ....|.+.+ ....++||+.++|+.|++ |++++++||. ........++. +..
T Consensus 80 ~~~~~---~-------~----~~~~~~~~~--~~~~~~~~~~~~l~~l~~-~~~~~i~tn~---~~~~~~~~l~~--l~~ 137 (240)
T 3smv_A 80 GLEPD---A-------A----EREEFGTSV--KNWPAFPDTVEALQYLKK-HYKLVILSNI---DRNEFKLSNAK--LGV 137 (240)
T ss_dssp TCCCC---H-------H----HHHHHHTGG--GGCCBCTTHHHHHHHHHH-HSEEEEEESS---CHHHHHHHHTT--TCS
T ss_pred CCCCC---H-------H----HHHHHHHHH--hcCCCCCcHHHHHHHHHh-CCeEEEEeCC---ChhHHHHHHHh--cCC
Confidence 54421 0 1 112222222 235799999999999999 8999999994 35666666665 556
Q ss_pred cchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHH
Q 017067 229 ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRA 308 (378)
Q Consensus 229 ~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~ 308 (378)
+|+. +++.+++.. .||+|++ |..
T Consensus 138 ~fd~-i~~~~~~~~------------------------------------------~KP~~~~--------------~~~ 160 (240)
T 3smv_A 138 EFDH-IITAQDVGS------------------------------------------YKPNPNN--------------FTY 160 (240)
T ss_dssp CCSE-EEEHHHHTS------------------------------------------CTTSHHH--------------HHH
T ss_pred ccCE-EEEccccCC------------------------------------------CCCCHHH--------------HHH
Confidence 7876 445544321 2666665 777
Q ss_pred H---HHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCC-------CC-CCCCCCCcEEecCCCcchHHHHHHhh
Q 017067 309 G---AEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSL-------TS-RAEFPSANAVMDGFGGADLTISKLRH 375 (378)
Q Consensus 309 a---~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~-------~~-~~~l~~ad~vi~~l~e~~~~~~~l~~ 375 (378)
+ ++++|++|++|++|||+. +|+.+|+++|+.+++++.+. .. ......||++++++.|+...+..++.
T Consensus 161 ~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l~~~l~ 239 (240)
T 3smv_A 161 MIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAHKQALK 239 (240)
T ss_dssp HHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHHHHHhc
Confidence 7 899999999999999996 99999999999999998651 11 22235689999999999887777653
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-24 Score=191.33 Aligned_cols=211 Identities=17% Similarity=0.193 Sum_probs=148.1
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
++|+|+||+||||+++... +..++.+++.++|++. .....+ ....+.........+....++....
T Consensus 8 ~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~--~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~-------- 73 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDI--SRRNEL---PDTLGLRIDMVVDLWYARQPWNGPS-------- 73 (226)
T ss_dssp CCCEEEECCBTTTBCCHHH-HHHHHHHHHHHTTCCG--GGGGGS---CCCTTCCHHHHHHHHHHHSCCSSSC--------
T ss_pred CCCEEEECCCCCcCcCHHH-HHHHHHHHHHHcCCCC--ChHHHH---HHHhCCCHHHHHHHHHHHcCCCccC--------
Confidence 4799999999999999876 6788889999999873 111111 1112222233344455555543221
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
...+.....+.+.+.+. ....++|++.++|+.|++.|++++++||. .....+..++.+|+..+|+.. ++.++...
T Consensus 74 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~ 148 (226)
T 1te2_A 74 RQEVVERVIARAISLVE-ETRPLLPGVREAVALCKEQGLLVGLASAS---PLHMLEKVLTMFDLRDSFDAL-ASAEKLPY 148 (226)
T ss_dssp HHHHHHHHHHHHHHHHH-HHCCBCTTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSEE-EECTTSSC
T ss_pred HHHHHHHHHHHHHHHHh-ccCCcCccHHHHHHHHHHCCCcEEEEeCC---cHHHHHHHHHhcCcHhhCcEE-EeccccCC
Confidence 12222333333333321 13568999999999999999999999994 467788899999999888774 33322110
Q ss_pred hhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017067 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (378)
Q Consensus 243 ~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~ 322 (378)
.||+|.. |+.+++++|++|++|++
T Consensus 149 ------------------------------------------~kp~~~~--------------~~~~~~~~~i~~~~~i~ 172 (226)
T 1te2_A 149 ------------------------------------------SKPHPQV--------------YLDCAAKLGVDPLTCVA 172 (226)
T ss_dssp ------------------------------------------CTTSTHH--------------HHHHHHHHTSCGGGEEE
T ss_pred ------------------------------------------CCCChHH--------------HHHHHHHcCCCHHHeEE
Confidence 1444443 99999999999999999
Q ss_pred EeCCHhHHHHHHHcCCCEEEEcCCCCCCCC-CCCCcEEecCCCcchH
Q 017067 323 IAGSQSGVAGAQRIGMPCVVMRSSLTSRAE-FPSANAVMDGFGGADL 368 (378)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~-l~~ad~vi~~l~e~~~ 368 (378)
|||+.||+.+|+.+|+.++++.++...... ...|+++++++.|+..
T Consensus 173 iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~ 219 (226)
T 1te2_A 173 LEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTA 219 (226)
T ss_dssp EESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCH
T ss_pred EeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhH
Confidence 999999999999999999999988655433 4458999999999853
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-23 Score=191.59 Aligned_cols=207 Identities=13% Similarity=0.082 Sum_probs=142.8
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHH---------------------
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRM--------------------- 140 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~--------------------- 140 (378)
+.+|+|+||+||||+++... +..++.++++++|++ .....+...+. +.....
T Consensus 13 ~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (254)
T 3umg_A 13 RNVRAVLFDTFGTVVDWRTG-IATAVADYAARHQLE---VDAVAFADRWR---ARYQPSMDAILSGAREFVTLDILHREN 85 (254)
T ss_dssp SBCCEEEECCBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHH---TTHHHHHHHHHTTSSCCCCHHHHHHHH
T ss_pred CCceEEEEeCCCceecCchH-HHHHHHHHHHHhcCC---CCHHHHHHHHH---HhHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence 56899999999999998875 778999999999987 33322222221 111111
Q ss_pred HHHHHHHcCCCC-CCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHH
Q 017067 141 LVLFFNRIGWPT-SVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARS 219 (378)
Q Consensus 141 ~~~~~~~~g~~~-~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~ 219 (378)
...+...++.+. .+. ....+.+.+.. ....++||+.++|+.|+++ ++++++|| +.......
T Consensus 86 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~t~---~~~~~~~~ 147 (254)
T 3umg_A 86 LDFVLRESGIDPTNHD------------SGELDELARAW--HVLTPWPDSVPGLTAIKAE-YIIGPLSN---GNTSLLLD 147 (254)
T ss_dssp HHHHHHHTTCCGGGSC------------HHHHHHHHGGG--GSCCBCTTHHHHHHHHHHH-SEEEECSS---SCHHHHHH
T ss_pred HHHHHHHhCCCcCcCC------------HHHHHHHHHHH--hhCcCCcCHHHHHHHHHhC-CeEEEEeC---CCHHHHHH
Confidence 112222222210 000 00111111111 2467899999999999997 99999999 44678888
Q ss_pred HHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchh
Q 017067 220 VVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESL 299 (378)
Q Consensus 220 ~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~ 299 (378)
+++.+|+. |+. +++.+++.. .||+|.+
T Consensus 148 ~l~~~~~~--f~~-~~~~~~~~~------------------------------------------~kp~~~~-------- 174 (254)
T 3umg_A 148 MAKNAGIP--WDV-IIGSDINRK------------------------------------------YKPDPQA-------- 174 (254)
T ss_dssp HHHHHTCC--CSC-CCCHHHHTC------------------------------------------CTTSHHH--------
T ss_pred HHHhCCCC--eeE-EEEcCcCCC------------------------------------------CCCCHHH--------
Confidence 99999986 665 344433311 2555554
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEc----CCCCCCCCC---CCCcEEecCCCcchHHHHH
Q 017067 300 DKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR----SSLTSRAEF---PSANAVMDGFGGADLTISK 372 (378)
Q Consensus 300 ~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~----~~~~~~~~l---~~ad~vi~~l~e~~~~~~~ 372 (378)
|+.+++++|++|++|++|||+.+|+.+|+.+|+.+++++ ++.....++ ..+|++++++.|+...+..
T Consensus 175 ------~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 175 ------YLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp ------HHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHH
T ss_pred ------HHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcC
Confidence 999999999999999999999999999999999999998 554444444 4589999999998766543
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6.2e-24 Score=190.48 Aligned_cols=206 Identities=17% Similarity=0.239 Sum_probs=146.2
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCC-hHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD-EDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
+|+|+||+||||+|+... +..++.++++++|++. ++...+ ....|. .......+....+.. ++.+.
T Consensus 2 ~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~----~~~~g~~~~~~~~~~~~~~~~~--~~~~~---- 68 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEY-HFRAWKALAEEIGING--VDRQFN----EQLKGVSREDSLQKILDLADKK--VSAEE---- 68 (221)
T ss_dssp CCEEEECCBTTTBTHHHH-HHHHHHHHHHHTTCCC--CSHHHH----TTTTTCCHHHHHHHHHHHTTCC--CCHHH----
T ss_pred CcEEEECCCCcccCChHH-HHHHHHHHHHHcCCCC--CCHHHH----HHhCCCCHHHHHHHHHHHhCCC--CChHH----
Confidence 689999999999999876 7788899999998761 332222 222232 233444555555532 22121
Q ss_pred HHHHHHHHHHHHHHHHhc-CCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 163 VKNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~-~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
+..+.....+.|.+.+.. ....++||+.++|+.|+++|++++++||. ......++.+|+..+|+. +++.+++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~-----~~~~~~l~~~~l~~~f~~-~~~~~~~~ 142 (221)
T 2wf7_A 69 FKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS-----KNGPFLLERMNLTGYFDA-IADPAEVA 142 (221)
T ss_dssp HHHHHHHHHHHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC-----TTHHHHHHHTTCGGGCSE-ECCTTTSS
T ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc-----HHHHHHHHHcChHHHcce-EeccccCC
Confidence 233344444455554422 13568999999999999999999999994 345678888999988876 33333221
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|++ |+.+++++|++|++|+
T Consensus 143 ~------------------------------------------~Kp~~~~--------------~~~~~~~lgi~~~~~i 166 (221)
T 2wf7_A 143 A------------------------------------------SKPAPDI--------------FIAAAHAVGVAPSESI 166 (221)
T ss_dssp S------------------------------------------CTTSSHH--------------HHHHHHHTTCCGGGEE
T ss_pred C------------------------------------------CCCChHH--------------HHHHHHHcCCChhHeE
Confidence 1 1555554 9999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchH
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADL 368 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~ 368 (378)
+|||+.||++||+.+|+.+++++.. .++..||+|++++.|+..
T Consensus 167 ~iGD~~nDi~~a~~aG~~~~~~~~~----~~~~~a~~v~~~~~el~~ 209 (221)
T 2wf7_A 167 GLEDSQAGIQAIKDSGALPIGVGRP----EDLGDDIVIVPDTSHYTL 209 (221)
T ss_dssp EEESSHHHHHHHHHHTCEEEEESCH----HHHCSSSEEESSGGGCCH
T ss_pred EEeCCHHHHHHHHHCCCEEEEECCH----HHhccccchhcCHHhCCH
Confidence 9999999999999999999999643 334479999999999743
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.5e-24 Score=188.16 Aligned_cols=201 Identities=16% Similarity=0.173 Sum_probs=142.1
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
|++|+|+||+||||+++... +..++.++++++|+. .+...+....+. .........+....++.
T Consensus 2 M~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~---------- 65 (207)
T 2go7_A 2 MQKTAFIWDLDGTLLDSYEA-ILSGIEETFAQFSIP---YDKEKVREFIFK--YSVQDLLVRVAEDRNLD---------- 65 (207)
T ss_dssp --CCEEEECTBTTTEECHHH-HHHHHHHHHHHHTCC---CCHHHHHHHHHH--SCHHHHHHHHHHHHTCC----------
T ss_pred CcccEEEEeCCCcccccHHH-HHHHHHHHHHHcCCC---CCHHHHHHHHcc--ccHHHHHHHhhchhhcc----------
Confidence 35789999999999999876 778888999999885 444444444430 12222333332222211
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
..........+.+.+ .....++|++.++|+.|+++|++++++||.. ..... .++.+++..+|+.. ++.++..
T Consensus 66 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~-~~~~~~~~~~f~~~-~~~~~~~ 137 (207)
T 2go7_A 66 --VEVLNQVRAQSLAEK-NAQVVLMPGAREVLAWADESGIQQFIYTHKG---NNAFT-ILKDLGVESYFTEI-LTSQSGF 137 (207)
T ss_dssp --HHHHHHHHHHHHTTC-GGGCEECTTHHHHHHHHHHTTCEEEEECSSC---THHHH-HHHHHTCGGGEEEE-ECGGGCC
T ss_pred --HHHHHHHHHHHHHhc-cccceeCcCHHHHHHHHHHCCCeEEEEeCCc---hHHHH-HHHHcCchhheeeE-EecCcCC
Confidence 112222233333222 2345689999999999999999999999954 56777 88999999888763 3332221
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|.+ |..+++++|++|++|+
T Consensus 138 ~------------------------------------------~Kp~~~~--------------~~~~~~~~~i~~~~~~ 161 (207)
T 2go7_A 138 V------------------------------------------RKPSPEA--------------ATYLLDKYQLNSDNTY 161 (207)
T ss_dssp C------------------------------------------CTTSSHH--------------HHHHHHHHTCCGGGEE
T ss_pred C------------------------------------------CCCCcHH--------------HHHHHHHhCCCcccEE
Confidence 0 1555444 8999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchH
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADL 368 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~ 368 (378)
+|||+.+|+.+|+.+|+.+|++.++. . .|+++++++.|+..
T Consensus 162 ~iGD~~nDi~~~~~aG~~~i~~~~~~-~-----~a~~v~~~~~el~~ 202 (207)
T 2go7_A 162 YIGDRTLDVEFAQNSGIQSINFLEST-Y-----EGNHRIQALADISR 202 (207)
T ss_dssp EEESSHHHHHHHHHHTCEEEESSCCS-C-----TTEEECSSTTHHHH
T ss_pred EECCCHHHHHHHHHCCCeEEEEecCC-C-----CCCEEeCCHHHHHH
Confidence 99999999999999999999998875 3 58999999999743
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=192.87 Aligned_cols=218 Identities=11% Similarity=0.100 Sum_probs=142.4
Q ss_pred CCCCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhH-HHHHHhhccCChHHHHHHHHHHcCCCCCCCch
Q 017067 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI-YTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTN 157 (378)
Q Consensus 79 ~~~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~ 157 (378)
...|++|+|+||+||||+|+... +..++.+++.++|++ ..... +..+... ....+........+... . ..
T Consensus 17 ~~~m~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~-~~ 87 (254)
T 3umc_A 17 LYFQGMRAILFDVFGTLVDWRSS-LIEQFQALERELGGT---LPCVELTDRWRQQ---YKPAMDRVRNGQAPWQH-L-DQ 87 (254)
T ss_dssp CCSSSCCEEEECCBTTTEEHHHH-HHHHHHHHHHHSSSC---CCHHHHHHHHHHH---THHHHHHHHTTSSCCCC-H-HH
T ss_pred ccccCCcEEEEeCCCccEecCcc-HHHHHHHHHHHhcCC---CCHHHHHHHHHHH---HHHHHHHHhcccCCccc-H-HH
Confidence 34567899999999999998875 778899999999987 33322 2222211 01111111111000000 0 00
Q ss_pred hhHHHHHHHHHH--------HHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc
Q 017067 158 EKKAFVKNVLQE--------KKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (378)
Q Consensus 158 ~~~~~i~~~~~~--------~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~ 229 (378)
.....+..+.+. ..+.+.... ....++||+.++|+.|+++ ++++++|| +.......+++.+|+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~s~---~~~~~~~~~l~~~g~~-- 159 (254)
T 3umc_A 88 LHRQSLEALAGEFGLALDEALLQRITGFW--HRLRPWPDTLAGMHALKAD-YWLAALSN---GNTALMLDVARHAGLP-- 159 (254)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHGGG--GSCEECTTHHHHHHHHTTT-SEEEECCS---SCHHHHHHHHHHHTCC--
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHH--hcCCCCccHHHHHHHHHhc-CeEEEEeC---CCHHHHHHHHHHcCCC--
Confidence 000000111000 011111111 2356899999999999986 99999999 4467788899999986
Q ss_pred chheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHH
Q 017067 230 SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAG 309 (378)
Q Consensus 230 f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a 309 (378)
|+. +++.+++. ..||+|++ |+.+
T Consensus 160 f~~-~~~~~~~~------------------------------------------~~kp~~~~--------------~~~~ 182 (254)
T 3umc_A 160 WDM-LLCADLFG------------------------------------------HYKPDPQV--------------YLGA 182 (254)
T ss_dssp CSE-ECCHHHHT------------------------------------------CCTTSHHH--------------HHHH
T ss_pred cce-EEeecccc------------------------------------------cCCCCHHH--------------HHHH
Confidence 665 34443331 12555555 9999
Q ss_pred HHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEc----CCCCCCCCC---CCCcEEecCCCcchHHH
Q 017067 310 AEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR----SSLTSRAEF---PSANAVMDGFGGADLTI 370 (378)
Q Consensus 310 ~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~----~~~~~~~~l---~~ad~vi~~l~e~~~~~ 370 (378)
++++|++|++|++|||+.+|++||+++||.+++++ ++....+++ ..||+|++++.|+...+
T Consensus 183 ~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 183 CRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp HHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred HHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 99999999999999999999999999999999998 555455554 45899999999986544
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-24 Score=203.60 Aligned_cols=124 Identities=9% Similarity=0.055 Sum_probs=101.2
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHh---CccccchheeechhhHHHhhhhccccccccccCc
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---GSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~l---gi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~ 258 (378)
...++||+.++|+.|+++|++++|+||+. ....+.+++.+ |+.++|+. +++. ++.
T Consensus 128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~---~~~~~~~l~~~~~~~l~~~fd~-i~~~-~~~----------------- 185 (261)
T 1yns_A 128 KAEFFADVVPAVRKWREAGMKVYIYSSGS---VEAQKLLFGHSTEGDILELVDG-HFDT-KIG----------------- 185 (261)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSC---HHHHHHHHHTBTTBCCGGGCSE-EECG-GGC-----------------
T ss_pred ccccCcCHHHHHHHHHhCCCeEEEEeCCC---HHHHHHHHHhhcccChHhhccE-EEec-CCC-----------------
Confidence 47799999999999999999999999954 56777888854 59999987 4444 331
Q ss_pred chhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCC
Q 017067 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (378)
Q Consensus 259 ~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 338 (378)
.||+|++ |+.+++++|++|++|+||||+.+||.+|+++||
T Consensus 186 --------------------------~KP~p~~--------------~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~ 225 (261)
T 1yns_A 186 --------------------------HKVESES--------------YRKIADSIGCSTNNILFLTDVTREASAAEEADV 225 (261)
T ss_dssp --------------------------CTTCHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTC
T ss_pred --------------------------CCCCHHH--------------HHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCC
Confidence 1777777 999999999999999999999999999999999
Q ss_pred CEEEEcCCCCCCCC-C-CCCcEEecCCCcch
Q 017067 339 PCVVMRSSLTSRAE-F-PSANAVMDGFGGAD 367 (378)
Q Consensus 339 ~~i~v~~~~~~~~~-l-~~ad~vi~~l~e~~ 367 (378)
++|+|.++.....+ . ..++++++++.++.
T Consensus 226 ~~i~v~~~~~~~~~~~~~~~~~~i~~l~el~ 256 (261)
T 1yns_A 226 HVAVVVRPGNAGLTDDEKTYYSLITSFSELY 256 (261)
T ss_dssp EEEEECCTTCCCCCHHHHHHSCEESSGGGCB
T ss_pred EEEEEeCCCCCcccccccCCCEEECCHHHhC
Confidence 99999765433222 1 24789999999984
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.8e-24 Score=191.00 Aligned_cols=192 Identities=15% Similarity=0.101 Sum_probs=137.5
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
+.+|+|+||+||||+++... |.++++++|++. .......+. .. ...
T Consensus 4 ~~~k~iifDlDGTL~d~~~~-----~~~~~~~~g~~~---~~~~~~~~~-~~---~~~---------------------- 49 (205)
T 3m9l_A 4 SEIKHWVFDMDGTLTIAVHD-----FAAIREALSIPA---EDDILTHLA-AL---PAD---------------------- 49 (205)
T ss_dssp GGCCEEEECTBTTTEEEEEC-----HHHHHHHTTCCT---TSCHHHHHH-HS---CHH----------------------
T ss_pred ccCCEEEEeCCCcCcccHHH-----HHHHHHHhCCCc---hHHHHHHHh-cC---ChH----------------------
Confidence 46899999999999998764 356778889873 212211111 00 000
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc--hheeechhh
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS--KIKIVGNEE 239 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f--~~~iv~~~~ 239 (378)
...........+.+.+ .....++||+.++|+.|+++|++++++|| +....+...++.+|+..+| +. +++.+.
T Consensus 50 -~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~~-i~~~~~ 123 (205)
T 3m9l_A 50 -ESAAKHAWLLEHERDL-AQGSRPAPGAVELVRELAGRGYRLGILTR---NARELAHVTLEAIGLADCFAEAD-VLGRDE 123 (205)
T ss_dssp -HHHHHHHHHHHTHHHH-EEEEEECTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTCGGGSCGGG-EECTTT
T ss_pred -HHHHHHHHHHHHHHHH-hhcCCCCccHHHHHHHHHhcCCeEEEEeC---CchHHHHHHHHHcCchhhcCcce-EEeCCC
Confidence 0011112222232333 23467899999999999999999999999 4468889999999999999 55 444322
Q ss_pred HHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCc
Q 017067 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (378)
Q Consensus 240 ~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~ 319 (378)
. ..||+|++ |+.+++++|++|++
T Consensus 124 -~------------------------------------------~~kp~~~~--------------~~~~~~~~g~~~~~ 146 (205)
T 3m9l_A 124 -A------------------------------------------PPKPHPGG--------------LLKLAEAWDVSPSR 146 (205)
T ss_dssp -S------------------------------------------CCTTSSHH--------------HHHHHHHTTCCGGG
T ss_pred -C------------------------------------------CCCCCHHH--------------HHHHHHHcCCCHHH
Confidence 1 12665555 99999999999999
Q ss_pred EEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHH
Q 017067 320 CFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISK 372 (378)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~ 372 (378)
|++|||+.+|+++|+.+|+++|++.++.... ...||+|++++.|+...++.
T Consensus 147 ~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~--~~~ad~v~~~~~el~~~~~~ 197 (205)
T 3m9l_A 147 MVMVGDYRFDLDCGRAAGTRTVLVNLPDNPW--PELTDWHARDCAQLRDLLSA 197 (205)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEECSSSSCSC--GGGCSEECSSHHHHHHHHHH
T ss_pred EEEECCCHHHHHHHHHcCCEEEEEeCCCCcc--cccCCEEeCCHHHHHHHHHh
Confidence 9999999999999999999999999876432 23489999999998665543
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-23 Score=190.92 Aligned_cols=133 Identities=14% Similarity=0.201 Sum_probs=111.7
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
..++||+.++|+.|+++ ++++++||. ........++.+|+..+|+. +++.++...
T Consensus 99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~---~~~~~~~~l~~~~~~~~f~~-~~~~~~~~~-------------------- 153 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGK-YHVGMITDS---DTEQAMAFLDALGIKDLFDS-ITTSEEAGF-------------------- 153 (234)
T ss_dssp CCBCTTHHHHHHHHTTT-SEEEEEESS---CHHHHHHHHHHTTCGGGCSE-EEEHHHHTB--------------------
T ss_pred CCcCcCHHHHHHHHHhC-CcEEEEECC---CHHHHHHHHHHcCcHHHcce-eEeccccCC--------------------
Confidence 46899999999999999 999999994 46788899999999999987 444443311
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCV 341 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i 341 (378)
.||+|.+ |+.+++++|++|++|++|||+. ||+.+|+.+|++++
T Consensus 154 ----------------------~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~ 197 (234)
T 3u26_A 154 ----------------------FKPHPRI--------------FELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSI 197 (234)
T ss_dssp ----------------------CTTSHHH--------------HHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEE
T ss_pred ----------------------CCcCHHH--------------HHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEE
Confidence 2666555 9999999999999999999997 99999999999999
Q ss_pred EEcCCCCCCCCCCCCcEEecCCCcchHHHHHHhhc
Q 017067 342 VMRSSLTSRAEFPSANAVMDGFGGADLTISKLRHS 376 (378)
Q Consensus 342 ~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l~~~ 376 (378)
++.++.........||++++++.|+...+..+...
T Consensus 198 ~v~~~~~~~~~~~~a~~~~~~~~el~~~l~~~~~~ 232 (234)
T 3u26_A 198 LLDRKGEKREFWDKCDFIVSDLREVIKIVDELNGQ 232 (234)
T ss_dssp EECSSSTTGGGGGGCSEEESSTHHHHHHHHHHC--
T ss_pred EECCCCCccccccCCCEeeCCHHHHHHHHHHHhhc
Confidence 99998766665668999999999998888777543
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-23 Score=193.62 Aligned_cols=220 Identities=15% Similarity=0.091 Sum_probs=149.3
Q ss_pred CCccEEEEecccccccccc-cchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHH----------HHHHHcCC
Q 017067 82 PRDLAVLLEVDGVLVDAYR-FGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV----------LFFNRIGW 150 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~-~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~----------~~~~~~g~ 150 (378)
|.+|+|+||+||||+|+.. . +..++.++++++|++ .+...+.. ..+........ .+...++.
T Consensus 4 m~ik~i~fDlDGTLld~~~~~-~~~~~~~~l~~~G~~---~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFA-PLEVFMEIFHKRGVA---ITAEEARK---PMGLLKIDHVRALTEMPRIASEWNRVFRQ 76 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCT-THHHHHHHHHTTTCC---CCHHHHHT---TTTSCHHHHHHHHHHSHHHHHHHHHHHSS
T ss_pred CCceEEEEecCCCEEeCCCcc-HHHHHHHHHHHcCCC---CCHHHHHH---HhccchHHHHHHhcccHHHHHHHHHHhCC
Confidence 4589999999999999876 4 578899999999986 33222222 11111111111 11122332
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc
Q 017067 151 PTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (378)
Q Consensus 151 ~~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f 230 (378)
. ++.+ .+..+...+.+.+.+.+ .....++||+.++++.|+++|++++++||. ....+..+++.+|+..+|
T Consensus 77 ~--~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~~~~~~ 146 (267)
T 1swv_A 77 L--PTEA----DIQEMYEEFEEILFAIL-PRYASPINGVKEVIASLRERGIKIGSTTGY---TREMMDIVAKEAALQGYK 146 (267)
T ss_dssp C--CCHH----HHHHHHHHHHHHHHHHG-GGGCCBCTTHHHHHHHHHHTTCEEEEBCSS---CHHHHHHHHHHHHHTTCC
T ss_pred C--CCHH----HHHHHHHHHHHHHHHhh-ccccccCccHHHHHHHHHHcCCeEEEEcCC---CHHHHHHHHHHcCCcccC
Confidence 2 1111 12233333334443333 234568999999999999999999999994 457788888888887775
Q ss_pred -hheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHH
Q 017067 231 -KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAG 309 (378)
Q Consensus 231 -~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a 309 (378)
+. +++.+++.. .||+|.+ |..+
T Consensus 147 ~~~-~~~~~~~~~------------------------------------------~kp~~~~--------------~~~~ 169 (267)
T 1swv_A 147 PDF-LVTPDDVPA------------------------------------------GRPYPWM--------------CYKN 169 (267)
T ss_dssp CSC-CBCGGGSSC------------------------------------------CTTSSHH--------------HHHH
T ss_pred hHh-eecCCccCC------------------------------------------CCCCHHH--------------HHHH
Confidence 54 333332211 1444444 9999
Q ss_pred HHHcCCCC-CcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCC-----------------------CCCC--CCCcEEecCC
Q 017067 310 AEYAEKPV-RNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTS-----------------------RAEF--PSANAVMDGF 363 (378)
Q Consensus 310 ~~~lgv~p-~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~-----------------------~~~l--~~ad~vi~~l 363 (378)
++++|++| ++|++|||+.||+.||+.+|+.++++.++... ..++ ..||+|++++
T Consensus 170 ~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~~~ 249 (267)
T 1swv_A 170 AMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETM 249 (267)
T ss_dssp HHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSG
T ss_pred HHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceeccCH
Confidence 99999999 99999999999999999999999999988652 1122 3489999999
Q ss_pred CcchHHHHHHhh
Q 017067 364 GGADLTISKLRH 375 (378)
Q Consensus 364 ~e~~~~~~~l~~ 375 (378)
.|+...+..+..
T Consensus 250 ~el~~~l~~~~~ 261 (267)
T 1swv_A 250 QELESVMEHIEK 261 (267)
T ss_dssp GGHHHHHHHHTC
T ss_pred HHHHHHHHHHhh
Confidence 999877766543
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-24 Score=195.47 Aligned_cols=130 Identities=11% Similarity=0.100 Sum_probs=109.4
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
..++||+.++|+.|+++|++++++||. ....+...++.+|+..+|+. +++.++...
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~-------------------- 153 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNG---NPQMLEIAVKSAGMSGLFDH-VLSVDAVRL-------------------- 153 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESS---CHHHHHHHHHTTTCTTTCSE-EEEGGGTTC--------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCC---CHHHHHHHHHHCCcHhhcCE-EEEecccCC--------------------
Confidence 568999999999999999999999994 46788899999999999987 444433211
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
.||+|++ |+.+++++|++|++|++|||+.+|+.+|+.+|+.+++
T Consensus 154 ----------------------~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~ 197 (233)
T 3umb_A 154 ----------------------YKTAPAA--------------YALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFW 197 (233)
T ss_dssp ----------------------CTTSHHH--------------HTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred ----------------------CCcCHHH--------------HHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEE
Confidence 2655555 9999999999999999999999999999999999999
Q ss_pred EcCCCCCCCCCC-CCcEEecCCCcchHHHHH
Q 017067 343 MRSSLTSRAEFP-SANAVMDGFGGADLTISK 372 (378)
Q Consensus 343 v~~~~~~~~~l~-~ad~vi~~l~e~~~~~~~ 372 (378)
+.++.....++. .||++++++.|+...+..
T Consensus 198 v~~~~~~~~~~~~~~~~v~~~~~el~~~l~~ 228 (233)
T 3umb_A 198 INRLGHPPEALDVAPAAAGHDMRDLLQFVQA 228 (233)
T ss_dssp ECTTCCCCCSSSCCCSEEESSHHHHHHHHHC
T ss_pred EcCCCCCchhccCCCCEEECCHHHHHHHHHH
Confidence 998876666554 489999999998766554
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-23 Score=187.88 Aligned_cols=132 Identities=14% Similarity=0.147 Sum_probs=108.8
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
...++||+.++|+.|+++|++++++||. ....+..+++.+|+..+|+. +++.+++..
T Consensus 94 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~------------------- 150 (230)
T 3um9_A 94 SLTPFADVPQALQQLRAAGLKTAILSNG---SRHSIRQVVGNSGLTNSFDH-LISVDEVRL------------------- 150 (230)
T ss_dssp SCCBCTTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHTCGGGCSE-EEEGGGTTC-------------------
T ss_pred cCCCCCCHHHHHHHHHhCCCeEEEEeCC---CHHHHHHHHHHCCChhhcce-eEehhhccc-------------------
Confidence 4678999999999999999999999994 46788899999999999987 444433211
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
.||+|.+ |+.+++++|++|++|++|||+.+|+.+|+++|+.++
T Consensus 151 -----------------------~kp~~~~--------------~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~ 193 (230)
T 3um9_A 151 -----------------------FKPHQKV--------------YELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVC 193 (230)
T ss_dssp -----------------------CTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEE
T ss_pred -----------------------CCCChHH--------------HHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEE
Confidence 2555554 999999999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCC-CCcEEecCCCcchHHHHHH
Q 017067 342 VMRSSLTSRAEFP-SANAVMDGFGGADLTISKL 373 (378)
Q Consensus 342 ~v~~~~~~~~~l~-~ad~vi~~l~e~~~~~~~l 373 (378)
++.++......+. .+|++++++.|+...+..+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 226 (230)
T 3um9_A 194 WINRSNGVFDQLGVVPDIVVSDVGVLASRFSPV 226 (230)
T ss_dssp EECTTSCCCCCSSCCCSEEESSHHHHHHTCCC-
T ss_pred EEeCCCCccccccCCCcEEeCCHHHHHHHHHHh
Confidence 9998866555544 5899999999986554443
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.3e-23 Score=185.01 Aligned_cols=205 Identities=11% Similarity=0.033 Sum_probs=135.7
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHH--------hhccCChHHH----HHHHHHHcCCC
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLL--------RKSAGDEDRM----LVLFFNRIGWP 151 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~--------~~~~g~~~~~----~~~~~~~~g~~ 151 (378)
+|+|+||+||||+++... +..++.++++.++..- ....+...+ ...+.....+ ........+..
T Consensus 8 ik~i~fDlDGTL~~~~~~-~~~~~~~~~~~l~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNEPF-FQEVEKQYTDLLKPYG---TSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGK 83 (234)
T ss_dssp CCEEEECCBTTTBCCHHH-HHHHHHHHHHHTGGGS---CHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTC
T ss_pred ccEEEEeCCCCCccCcch-HHHHHHHHHHHHHhcC---CHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCC
Confidence 799999999999999875 6666555555433210 112121111 1111111111 11112222211
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCC-CcEEEEeCCCCCchHHHHHHHHHhCccccc
Q 017067 152 TSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (378)
Q Consensus 152 ~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G-~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f 230 (378)
++. .......+.+.+.+ .....++||+.++|+.|+++| ++++++|| +........++.+|+.++|
T Consensus 84 --~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~---~~~~~~~~~l~~~~~~~~f 149 (234)
T 3ddh_A 84 --IAA--------DIIRQIVDLGKSLL-KMPIELLPGVKETLKTLKETGKYKLVVATK---GDLLDQENKLERSGLSPYF 149 (234)
T ss_dssp --CCH--------HHHHHHHHHHHHHT-TCCCCBCTTHHHHHHHHHHHCCCEEEEEEE---SCHHHHHHHHHHHTCGGGC
T ss_pred --CCH--------HHHHHHHHHHHHHh-hccCCcCccHHHHHHHHHhCCCeEEEEEeC---CchHHHHHHHHHhCcHhhh
Confidence 111 12233334444444 345779999999999999999 99999999 4467788999999999999
Q ss_pred hheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHH
Q 017067 231 KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGA 310 (378)
Q Consensus 231 ~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~ 310 (378)
+..+.+. ||+|.+ |+.++
T Consensus 150 ~~~~~~~------------------------------------------------kpk~~~--------------~~~~~ 167 (234)
T 3ddh_A 150 DHIEVMS------------------------------------------------DKTEKE--------------YLRLL 167 (234)
T ss_dssp SEEEEES------------------------------------------------CCSHHH--------------HHHHH
T ss_pred heeeecC------------------------------------------------CCCHHH--------------HHHHH
Confidence 8743111 544444 99999
Q ss_pred HHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCC----CCCCCCCCC-cEEecCCCcchH
Q 017067 311 EYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSL----TSRAEFPSA-NAVMDGFGGADL 368 (378)
Q Consensus 311 ~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~----~~~~~l~~a-d~vi~~l~e~~~ 368 (378)
+++|++|++|++|||+. +|+.+|+++|+.++++.++. ........+ |++++++.|+..
T Consensus 168 ~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~ 231 (234)
T 3ddh_A 168 SILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLS 231 (234)
T ss_dssp HHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHH
T ss_pred HHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHH
Confidence 99999999999999996 99999999999999995543 333334444 999999999864
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=187.33 Aligned_cols=215 Identities=12% Similarity=-0.031 Sum_probs=144.0
Q ss_pred CCccEEEEecccccccccccchHHHHHHHH---HHcCCCCC-CCChhHHHHHH---hhccCChHHHHHHHH----HHcCC
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAF---QKLGLDCA-NWTAPIYTDLL---RKSAGDEDRMLVLFF----NRIGW 150 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~---~~~gl~~~-~~~~~~~~~~~---~~~~g~~~~~~~~~~----~~~g~ 150 (378)
|++|+|+||+||||+|+... +..++.+++ .++|++.. ........... ...+.....+...+. ...+.
T Consensus 11 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 89 (251)
T 2pke_A 11 QAIQLVGFDGDDTLWKSEDY-YRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEA 89 (251)
T ss_dssp CSCCEEEECCBTTTBCCHHH-HHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTT
T ss_pred CceeEEEEeCCCCCccCcHh-HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCC
Confidence 45799999999999999886 677778777 46777620 01111111111 122222333332222 22222
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc
Q 017067 151 PTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (378)
Q Consensus 151 ~~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f 230 (378)
. .. ........+.|.+.+ .....++||+.++|+.|+ +|++++++||. ........++.+|+..+|
T Consensus 90 ~--~~--------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~---~~~~~~~~l~~~~l~~~f 154 (251)
T 2pke_A 90 R--IE--------ARDIQRIVEIGRATL-QHPVEVIAGVREAVAAIA-ADYAVVLITKG---DLFHQEQKIEQSGLSDLF 154 (251)
T ss_dssp C--CC--------HHHHHHHHHHHHHHH-TCCCCBCTTHHHHHHHHH-TTSEEEEEEES---CHHHHHHHHHHHSGGGTC
T ss_pred C--CC--------hHHHHHHHHHHHHHH-hccCCcCccHHHHHHHHH-CCCEEEEEeCC---CHHHHHHHHHHcCcHHhC
Confidence 1 11 122233334444444 345779999999999999 99999999994 467788899999999988
Q ss_pred hheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHH
Q 017067 231 KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGA 310 (378)
Q Consensus 231 ~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~ 310 (378)
+..+. . .||+|++ |..++
T Consensus 155 ~~i~~-~-----------------------------------------------~kp~~~~--------------~~~~~ 172 (251)
T 2pke_A 155 PRIEV-V-----------------------------------------------SEKDPQT--------------YARVL 172 (251)
T ss_dssp CCEEE-E-----------------------------------------------SCCSHHH--------------HHHHH
T ss_pred ceeee-e-----------------------------------------------CCCCHHH--------------HHHHH
Confidence 76432 1 1555554 99999
Q ss_pred HHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCC----C--CCCCCcE-EecCCCcchHHHHHHh
Q 017067 311 EYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSR----A--EFPSANA-VMDGFGGADLTISKLR 374 (378)
Q Consensus 311 ~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~----~--~l~~ad~-vi~~l~e~~~~~~~l~ 374 (378)
+++|++|++|++|||+. +|+.+|+++|+.+|++.++.... + ....+++ +++++.|+...+..+.
T Consensus 173 ~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~l~~~~ 244 (251)
T 2pke_A 173 SEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAAVRALD 244 (251)
T ss_dssp HHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGHHHHHHHHH
T ss_pred HHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHHHHHHHHhC
Confidence 99999999999999999 99999999999999998775421 1 1245898 9999999977666553
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.7e-23 Score=185.41 Aligned_cols=212 Identities=13% Similarity=0.089 Sum_probs=142.6
Q ss_pred ccEEEEecccccccccccchHHHHHHH---HHHcCCCCCCCChhHHHHHHhhc----cCC---h----HHHHHHHHHHcC
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVA---FQKLGLDCANWTAPIYTDLLRKS----AGD---E----DRMLVLFFNRIG 149 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~---~~~~gl~~~~~~~~~~~~~~~~~----~g~---~----~~~~~~~~~~~g 149 (378)
+|+|+||+||||+++... +..++..+ +.+.+......+...+..+.... ... . ......+....+
T Consensus 2 ik~i~fDlDGTL~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (230)
T 3vay_A 2 IKLVTFDLDDTLWDTAPA-IVGAEAALRDWLAEQAPKLGPVPVEHLWEIRSRLLDEDPSFKHRISALRRRVLFHALEDAG 80 (230)
T ss_dssp CCEEEECCBTTTBCSHHH-HHHHHHHHHHHHHHHCTTTCSCCHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHTTT
T ss_pred eeEEEecCcccCcCCchH-HHHHHHHHHHHHHHhcCcchhhHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHhC
Confidence 689999999999998864 44444433 44444432223333333332211 000 0 111222333344
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcccc
Q 017067 150 WPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (378)
Q Consensus 150 ~~~~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~ 229 (378)
++ .++ ...+.+...+.|.+.. ....++||+.++|+.|+++ ++++++||... . ++.+|+..+
T Consensus 81 ~~----~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~---~-----l~~~~l~~~ 141 (230)
T 3vay_A 81 YD----SDE----AQQLADESFEVFLHGR--HQVQIFPEVQPTLEILAKT-FTLGVITNGNA---D-----VRRLGLADY 141 (230)
T ss_dssp CC----HHH----HHHHHHHHHHHHHHHH--TCCCBCTTHHHHHHHHHTT-SEEEEEESSCC---C-----GGGSTTGGG
T ss_pred CC----hhh----hHHHHHHHHHHHHHhh--ccCccCcCHHHHHHHHHhC-CeEEEEECCch---h-----hhhcCcHHH
Confidence 33 111 2333444444444433 3477999999999999998 99999999642 2 678899999
Q ss_pred chheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHH
Q 017067 230 SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAG 309 (378)
Q Consensus 230 f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a 309 (378)
|+. +++.+++.. .||+|++ |+.+
T Consensus 142 f~~-~~~~~~~~~------------------------------------------~kp~~~~--------------~~~~ 164 (230)
T 3vay_A 142 FAF-ALCAEDLGI------------------------------------------GKPDPAP--------------FLEA 164 (230)
T ss_dssp CSE-EEEHHHHTC------------------------------------------CTTSHHH--------------HHHH
T ss_pred eee-eEEccccCC------------------------------------------CCcCHHH--------------HHHH
Confidence 987 444433321 2666555 9999
Q ss_pred HHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHH
Q 017067 310 AEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISK 372 (378)
Q Consensus 310 ~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~ 372 (378)
++++|++|++|++|||+. +|+.+|+++|+.++++.++.........+|++++++.|+...+.+
T Consensus 165 ~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~ 228 (230)
T 3vay_A 165 LRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVLAR 228 (230)
T ss_dssp HHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHHHT
T ss_pred HHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHHHh
Confidence 999999999999999998 999999999999999998877655555689999999999765543
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=9.2e-24 Score=193.43 Aligned_cols=131 Identities=10% Similarity=0.160 Sum_probs=107.1
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.+++||+.++|+.|+++|++++++||. ....+..+++.+|+..+|+. +++.+++..
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~-------------------- 159 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNG---NDEMLQAALKASKLDRVLDS-CLSADDLKI-------------------- 159 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSE-EEEGGGTTC--------------------
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHhcCcHHHcCE-EEEccccCC--------------------
Confidence 678999999999999999999999994 46788899999999999987 444433311
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
.||+|++ |+.+++++|++|++|++|||+.+|+.+|+.+|+.+++
T Consensus 160 ----------------------~Kp~~~~--------------~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 203 (240)
T 2no4_A 160 ----------------------YKPDPRI--------------YQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVR 203 (240)
T ss_dssp ----------------------CTTSHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred ----------------------CCCCHHH--------------HHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEE
Confidence 2555555 9999999999999999999999999999999999999
Q ss_pred EcCCCCCCCCC-CCC-cEEecCCCcchHHHHHHh
Q 017067 343 MRSSLTSRAEF-PSA-NAVMDGFGGADLTISKLR 374 (378)
Q Consensus 343 v~~~~~~~~~l-~~a-d~vi~~l~e~~~~~~~l~ 374 (378)
+.++.. ...+ ..+ +++++++.|+...+.++.
T Consensus 204 v~~~~~-~~~~~~~~~~~~~~~~~el~~~l~~~~ 236 (240)
T 2no4_A 204 INRQGN-PPEYEFAPLKHQVNSLSELWPLLAKNV 236 (240)
T ss_dssp ECTTCC-CCCCTTSCCSEEESSGGGHHHHHCC--
T ss_pred ECCCCC-CCcccCCCCceeeCCHHHHHHHHHHhh
Confidence 998865 3333 347 999999999876555443
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.90 E-value=5.5e-23 Score=193.37 Aligned_cols=205 Identities=8% Similarity=0.035 Sum_probs=130.1
Q ss_pred CccEEEEeccccccccccc------chHHHHHHHHHHcCCCCCCCChhHHHHHHhhccC-ChHHHHHHHHHHcCCCCCCC
Q 017067 83 RDLAVLLEVDGVLVDAYRF------GNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG-DEDRMLVLFFNRIGWPTSVP 155 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~------~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~g~~~~l~ 155 (378)
++++|+||+||||+|++.. .+...+...+.+++.. ....+.+....+ ....+...+...++....
T Consensus 30 ~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~-- 101 (253)
T 2g80_A 30 NYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRD------SPVSNILSQFHIDNKEQLQAHILELVAKDVK-- 101 (253)
T ss_dssp CCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTT------SHHHHHHHTTCCCCHHHHHHHHHHHHHTTCC--
T ss_pred CCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCc------HHHHHHHHHhhhccHHHHHHHHHHHHhcccc--
Confidence 4799999999999998742 1234455556666654 223333333222 233444445444432211
Q ss_pred chhhHHHHHHHHH-HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHh--C-------
Q 017067 156 TNEKKAFVKNVLQ-EKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL--G------- 225 (378)
Q Consensus 156 ~~~~~~~i~~~~~-~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~l--g------- 225 (378)
... .+.+.. .+.+.|... ....+++||+.++|+. |++++|+||+ ....++.+++.+ |
T Consensus 102 ~~~----~~~~~~~~~~~~~~~~--~~~~~~~pgv~e~L~~----g~~l~i~Tn~---~~~~~~~~l~~~~~g~~~~~~~ 168 (253)
T 2g80_A 102 DPI----LKQLQGYVWAHGYESG--QIKAPVYADAIDFIKR----KKRVFIYSSG---SVKAQKLLFGYVQDPNAPAHDS 168 (253)
T ss_dssp CHH----HHHHHHHHHHHHHHTT--SCCBCCCHHHHHHHHH----CSCEEEECSS---CHHHHHHHHHSBCCTTCTTSCC
T ss_pred hHH----HHHHHHHHHHHHHHhC--cccCCCCCCHHHHHHc----CCEEEEEeCC---CHHHHHHHHHhhcccccccccc
Confidence 111 111111 122223211 1246789999999988 8999999995 457788888876 4
Q ss_pred --ccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHH
Q 017067 226 --SERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIV 303 (378)
Q Consensus 226 --i~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~ 303 (378)
+.++|+. ++.. .+ +..||+|++
T Consensus 169 l~l~~~~~~-~f~~-~~------------------------------------------~g~KP~p~~------------ 192 (253)
T 2g80_A 169 LDLNSYIDG-YFDI-NT------------------------------------------SGKKTETQS------------ 192 (253)
T ss_dssp BCCGGGCCE-EECH-HH------------------------------------------HCCTTCHHH------------
T ss_pred cchHhhcce-EEee-ec------------------------------------------cCCCCCHHH------------
Confidence 5555543 1111 11 012777776
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcc
Q 017067 304 AALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 304 ~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~ 366 (378)
|..+++++|++|++|+||||+.+|+++|+++||++|++.++......-..++.++++|.|+
T Consensus 193 --~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 253 (253)
T 2g80_A 193 --YANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 253 (253)
T ss_dssp --HHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred --HHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhhC
Confidence 9999999999999999999999999999999999999976433221112378999999875
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-24 Score=195.64 Aligned_cols=208 Identities=14% Similarity=0.130 Sum_probs=139.0
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHH-HHHHhhccCCh--HH------HHHHHHHHcCCCC
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIY-TDLLRKSAGDE--DR------MLVLFFNRIGWPT 152 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~-~~~~~~~~g~~--~~------~~~~~~~~~g~~~ 152 (378)
|++++|+||+||||+|+... +..++.+++.++|++ .+...+ ..+....+... .. ....+...++...
T Consensus 1 M~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~ 76 (220)
T 2zg6_A 1 MKYKAVLVDFGNTLVGFKPV-FYEKVYQVLKDNGYD---LDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIYP 76 (220)
T ss_dssp CCCCEEEECSBTTTEEEEET-THHHHHHHHHHTTCC---CCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCCC
T ss_pred CCceEEEEcCCCceeccccc-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHhhhccCCCccccccccHHHHHHHcCCCC
Confidence 35789999999999999986 778899999999987 343322 32221111110 00 0233444555432
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchh
Q 017067 153 SVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232 (378)
Q Consensus 153 ~l~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~ 232 (378)
. + ...+...+.+ ......+++||+.++|+.|+++|++++|+||. .. .+..+++.+|+.++|+.
T Consensus 77 --~-~-------~~~~~~~~~~---~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~---~~-~~~~~l~~~gl~~~f~~ 139 (220)
T 2zg6_A 77 --S-E-------RLVKELKEAD---IRDGEAFLYDDTLEFLEGLKSNGYKLALVSNA---SP-RVKTLLEKFDLKKYFDA 139 (220)
T ss_dssp --C-H-------HHHHHHHHTT---TTCEEEEECTTHHHHHHHHHTTTCEEEECCSC---HH-HHHHHHHHHTCGGGCSE
T ss_pred --c-H-------HHHHHHHHHh---hcccCceECcCHHHHHHHHHHCCCEEEEEeCC---cH-HHHHHHHhcCcHhHeeE
Confidence 1 1 1111111111 11224578999999999999999999999994 33 47889999999999987
Q ss_pred eeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHH
Q 017067 233 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY 312 (378)
Q Consensus 233 ~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~ 312 (378)
+++.+++.. .||+|++ |..++++
T Consensus 140 -~~~~~~~~~------------------------------------------~Kp~~~~--------------~~~~~~~ 162 (220)
T 2zg6_A 140 -LALSYEIKA------------------------------------------VKPNPKI--------------FGFALAK 162 (220)
T ss_dssp -EC-----------------------------------------------------CCH--------------HHHHHHH
T ss_pred -EEeccccCC------------------------------------------CCCCHHH--------------HHHHHHH
Confidence 444443321 2777777 9999999
Q ss_pred cCCCCCcEEEEeCCHh-HHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHHh
Q 017067 313 AEKPVRNCFLIAGSQS-GVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 313 lgv~p~~~i~VGDs~~-Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l~ 374 (378)
+|++| ++|||+.+ |+.+|+++||++|++.++... .++ +.+++++.|+...+.++.
T Consensus 163 ~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~-~~~---~~~i~~l~el~~~l~~~~ 218 (220)
T 2zg6_A 163 VGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFY-PDV---RDRVKNLREALQKIEEMN 218 (220)
T ss_dssp HCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCC-TTC---CSCBSSHHHHHHHHHHHC
T ss_pred cCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCC-CCc---ceEECCHHHHHHHHHHhc
Confidence 99998 99999998 999999999999999865222 222 678899998876666554
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=183.01 Aligned_cols=210 Identities=17% Similarity=0.200 Sum_probs=147.2
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCC-hhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWT-APIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
++|+|+||+||||+++... +..++.++++++|.+ .+ ...+.... +.........+....+.... ..
T Consensus 3 ~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~--~~---- 69 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDSEII-AAQVESRLLTEAGYP---ISVEEMGERFA---GMTWKNILLQVESEASIPLS--AS---- 69 (229)
T ss_dssp CCSEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHT---TCCHHHHHHHHHHHHCCCCC--TH----
T ss_pred CccEEEEcCCCCcCccHHH-HHHHHHHHHHHhCCC---CCHHHHHHHHh---CCCHHHHHHHHHHHcCCCCC--HH----
Confidence 3789999999999999876 678889999999987 33 23333322 22334455556666664422 11
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc-hheeechhhH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KIKIVGNEEV 240 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f-~~~iv~~~~~ 240 (378)
.... ..+.|.+.+ .....++||+.++|+.++. +++++||. ........++.+|+..+| +. +++.+++
T Consensus 70 ~~~~----~~~~~~~~~-~~~~~~~~~~~~~l~~l~~---~~~i~s~~---~~~~~~~~l~~~~l~~~~~~~-~~~~~~~ 137 (229)
T 2fdr_A 70 LLDK----SEKLLDMRL-ERDVKIIDGVKFALSRLTT---PRCICSNS---SSHRLDMMLTKVGLKPYFAPH-IYSAKDL 137 (229)
T ss_dssp HHHH----HHHHHHHHH-HHHCCBCTTHHHHHHHCCS---CEEEEESS---CHHHHHHHHHHTTCGGGTTTC-EEEHHHH
T ss_pred HHHH----HHHHHHHHh-hcCCccCcCHHHHHHHhCC---CEEEEECC---ChhHHHHHHHhCChHHhccce-EEecccc
Confidence 1122 222232222 1125689999999998874 89999994 467888899999999988 65 4554433
Q ss_pred HHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhh--ccccccCCCCcchhHHHHHHHHHHHHHcCCCCC
Q 017067 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASML--KLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (378)
Q Consensus 241 ~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~--KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~ 318 (378)
.. . ||+|.+ |+.+++++|++|+
T Consensus 138 ~~------------------------------------------~~~kpk~~~--------------~~~~~~~l~~~~~ 161 (229)
T 2fdr_A 138 GA------------------------------------------DRVKPKPDI--------------FLHGAAQFGVSPD 161 (229)
T ss_dssp CT------------------------------------------TCCTTSSHH--------------HHHHHHHHTCCGG
T ss_pred cc------------------------------------------CCCCcCHHH--------------HHHHHHHcCCChh
Confidence 11 2 333333 9999999999999
Q ss_pred cEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCC----CCCC--CCcEEecCCCcchHHHHHH
Q 017067 319 NCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSR----AEFP--SANAVMDGFGGADLTISKL 373 (378)
Q Consensus 319 ~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~----~~l~--~ad~vi~~l~e~~~~~~~l 373 (378)
+|++|||+.+|+.+|+.+|+.+|++.++.... .++. .||++++++.|+...+..+
T Consensus 162 ~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~ 222 (229)
T 2fdr_A 162 RVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAM 222 (229)
T ss_dssp GEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHHHH
T ss_pred HeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHHHHHh
Confidence 99999999999999999999999998875421 1122 3899999999987666554
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.5e-23 Score=189.01 Aligned_cols=131 Identities=12% Similarity=0.116 Sum_probs=105.9
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
..++||+.++|+.|+++|++++++||. ....++.+++.+|+..+|+. +++.+++..
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~-------------------- 149 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNG---SPQSIDAVVSHAGLRDGFDH-LLSVDPVQV-------------------- 149 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSE-EEESGGGTC--------------------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHhcChHhhhhe-EEEecccCC--------------------
Confidence 568999999999999999999999994 46788899999999999987 344433211
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
.||+|++ |+.+++++|++|++|++|||+.+|+.+|+++|+.+++
T Consensus 150 ----------------------~Kp~~~~--------------~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 193 (232)
T 1zrn_A 150 ----------------------YKPDNRV--------------YELAEQALGLDRSAILFVASNAWDATGARYFGFPTCW 193 (232)
T ss_dssp ----------------------CTTSHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEE
T ss_pred ----------------------CCCCHHH--------------HHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEE
Confidence 2655555 9999999999999999999999999999999999999
Q ss_pred EcCCCCCCCCC-CCCcEEecCCCcchHHHHHH
Q 017067 343 MRSSLTSRAEF-PSANAVMDGFGGADLTISKL 373 (378)
Q Consensus 343 v~~~~~~~~~l-~~ad~vi~~l~e~~~~~~~l 373 (378)
+.++......+ ..+|++++++.|+...+..+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 225 (232)
T 1zrn_A 194 INRTGNVFEEMGQTPDWEVTSLRAVVELFETA 225 (232)
T ss_dssp ECTTCCCCCSSSCCCSEEESSHHHHHTTC---
T ss_pred EcCCCCCccccCCCCCEEECCHHHHHHHHHhh
Confidence 98875544443 45899999999886544443
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-23 Score=186.67 Aligned_cols=127 Identities=16% Similarity=0.151 Sum_probs=103.5
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
..++||+.+ |+.|+++ ++++|+||. ....++.+++.+|+..+|+. +++.+++..
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~-------------------- 126 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNG---SINEVKQHLERNGLLRYFKG-IFSAESVKE-------------------- 126 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESS---CHHHHHHHHHHTTCGGGCSE-EEEGGGGTC--------------------
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCc---CHHHHHHHHHHCCcHHhCcE-EEehhhcCC--------------------
Confidence 568999999 9999999 999999994 46788899999999999987 444433311
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
.||+|++ |..+++++| |++|++|||+.+|+.+|+++||++++
T Consensus 127 ----------------------~Kp~~~~--------------~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~ 168 (201)
T 2w43_A 127 ----------------------YKPSPKV--------------YKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIF 168 (201)
T ss_dssp ----------------------CTTCHHH--------------HHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEE
T ss_pred ----------------------CCCCHHH--------------HHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEE
Confidence 2655555 999999999 99999999999999999999999999
Q ss_pred EcCCCCCCCCC-CCCcEEecCCCcchHHHHHH
Q 017067 343 MRSSLTSRAEF-PSANAVMDGFGGADLTISKL 373 (378)
Q Consensus 343 v~~~~~~~~~l-~~ad~vi~~l~e~~~~~~~l 373 (378)
+.++......+ ..++++++++.|+...+..+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 200 (201)
T 2w43_A 169 VNRKNTIVDPIGGKPDVIVNDFKELYEWILRY 200 (201)
T ss_dssp ECSSSCCCCTTSCCCSEEESSHHHHHHHHHHH
T ss_pred ECCCCCCccccCCCCCEEECCHHHHHHHHHhc
Confidence 98865544333 35899999999986655543
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.6e-23 Score=193.08 Aligned_cols=202 Identities=12% Similarity=0.093 Sum_probs=140.5
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCCh-HHHHHHHHHHcCCCCCCCchhhHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE-DRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
++++|+||+||||+|+... +..++.++++++|+. +... ......|.. ......+.... .. .
T Consensus 34 ~ik~iifDlDGTLlds~~~-~~~~~~~~~~~~g~~----~~~~---~~~~~~G~~~~~~~~~~~~~~-----~~-~---- 95 (275)
T 2qlt_A 34 KINAALFDVDGTIIISQPA-IAAFWRDFGKDKPYF----DAEH---VIHISHGWRTYDAIAKFAPDF-----AD-E---- 95 (275)
T ss_dssp EESEEEECCBTTTEECHHH-HHHHHHHHHTTCTTC----CHHH---HHHHCTTCCHHHHHHHHCGGG-----CC-H----
T ss_pred cCCEEEECCCCCCCCCHHH-HHHHHHHHHHHcCCC----CHHH---HHHHhcCCCHHHHHHHHhccC-----Cc-H----
Confidence 3799999999999999886 778888999888831 1122 222222322 22222222111 11 1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHC-CCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~-G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~ 240 (378)
.........+.+.+ .....++||+.++|+.|+++ |++++++||. ....+...++.+|+.. |+. +++.+++
T Consensus 96 ---~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~---~~~~~~~~l~~~~l~~-f~~-i~~~~~~ 166 (275)
T 2qlt_A 96 ---EYVNKLEGEIPEKY-GEHSIEVPGAVKLCNALNALPKEKWAVATSG---TRDMAKKWFDILKIKR-PEY-FITANDV 166 (275)
T ss_dssp ---HHHHHHHHTHHHHH-CTTCEECTTHHHHHHHHHTSCGGGEEEECSS---CHHHHHHHHHHHTCCC-CSS-EECGGGC
T ss_pred ---HHHHHHHHHHHHHH-hcCCCcCcCHHHHHHHHHhccCCeEEEEeCC---CHHHHHHHHHHcCCCc-cCE-EEEcccC
Confidence 11222233333333 33466899999999999999 9999999994 4678888999999874 555 3444332
Q ss_pred HHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCC-----
Q 017067 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK----- 315 (378)
Q Consensus 241 ~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv----- 315 (378)
.. .||+|++ |+.+++++|+
T Consensus 167 ~~------------------------------------------~kp~~~~--------------~~~~~~~lgi~~~~~ 190 (275)
T 2qlt_A 167 KQ------------------------------------------GKPHPEP--------------YLKGRNGLGFPINEQ 190 (275)
T ss_dssp SS------------------------------------------CTTSSHH--------------HHHHHHHTTCCCCSS
T ss_pred CC------------------------------------------CCCChHH--------------HHHHHHHcCCCcccc
Confidence 11 1555444 9999999999
Q ss_pred --CCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC-CCcEEecCCCcch
Q 017067 316 --PVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP-SANAVMDGFGGAD 367 (378)
Q Consensus 316 --~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~-~ad~vi~~l~e~~ 367 (378)
+|++|++|||+.+|+++|+++|+.+++|.++........ .||++++++.|+.
T Consensus 191 ~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~ 245 (275)
T 2qlt_A 191 DPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIR 245 (275)
T ss_dssp CGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEE
T ss_pred CCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHcC
Confidence 999999999999999999999999999998865433333 4899999999874
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-22 Score=188.71 Aligned_cols=216 Identities=12% Similarity=0.084 Sum_probs=137.7
Q ss_pred CCCccEEEEecccccccccccchHHHHHHHHHHc-----CCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCC
Q 017067 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKL-----GLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVP 155 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~-----gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~ 155 (378)
.+.+|+|+||+||||+++... +..++.+++.++ +++ ......+..............+....+..
T Consensus 54 ~~~~k~i~FDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---- 123 (282)
T 3nuq_A 54 NPNLKVFFFDIDNCLYKSSTR-IHDLMQQSILRFFQTHLKLS-----PEDAHVLNNSYYKEYGLAIRGLVMFHKVN---- 123 (282)
T ss_dssp -CCCCEEEECCTTTTSCCCHH-HHHHHHHHHHHHHHHCTTSC-----HHHHHHHHHHHHHHTHHHHHHHHHTTSSC----
T ss_pred CCCCCEEEEecCCCcccCCcc-HHHHHHHHHHHHHHHhcCCC-----HHHHHHHHHHHHHHHhhhHHHHHHHcCCC----
Confidence 346899999999999998764 555555555553 544 22222221100000001111222333321
Q ss_pred chhhHHHHHHHHHHHHHHHHHHH-hcCCCCCCCCHHHHHHHHHHCCC--cEEEEeCCCCCchHHHHHHHHHhCccccchh
Q 017067 156 TNEKKAFVKNVLQEKKNALDEFL-ASKDAPLRPGVEDFVDDAYNEGI--PLIVLTAYGKSGDRIARSVVEKLGSERISKI 232 (378)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~l-~~~~~~~~pgv~~lL~~Lk~~G~--~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~ 232 (378)
. .. +.+.+.+.. ......++||+.++|+.|+++|+ +++|+|| +....++..++.+|+.++|+.
T Consensus 124 ~-------~~----~~~~~~~~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn---~~~~~~~~~l~~~gl~~~fd~ 189 (282)
T 3nuq_A 124 A-------LE----YNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTN---AYKNHAIRCLRLLGIADLFDG 189 (282)
T ss_dssp H-------HH----HHHHHTTTSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECS---SCHHHHHHHHHHHTCTTSCSE
T ss_pred H-------HH----HHHHHhhhhhhhhccCcChhHHHHHHHHHhCCCCceEEEEEC---CChHHHHHHHHhCCcccccce
Confidence 0 11 111111111 01246789999999999999999 9999999 456888999999999999987
Q ss_pred eeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHH
Q 017067 233 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY 312 (378)
Q Consensus 233 ~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~ 312 (378)
. ++.++... .+. ..||+|.+ |+.++++
T Consensus 190 v-~~~~~~~~----------~~~----------------------------~~Kp~~~~--------------~~~~~~~ 216 (282)
T 3nuq_A 190 L-TYCDYSRT----------DTL----------------------------VCKPHVKA--------------FEKAMKE 216 (282)
T ss_dssp E-ECCCCSSC----------SSC----------------------------CCTTSHHH--------------HHHHHHH
T ss_pred E-EEeccCCC----------ccc----------------------------CCCcCHHH--------------HHHHHHH
Confidence 4 33322100 000 11444444 9999999
Q ss_pred cCCCC-CcEEEEeCCHhHHHHHHHcCC-CEEEEcCCCCCC--CCCCCCcEEecCCCcchHHHHHH
Q 017067 313 AEKPV-RNCFLIAGSQSGVAGAQRIGM-PCVVMRSSLTSR--AEFPSANAVMDGFGGADLTISKL 373 (378)
Q Consensus 313 lgv~p-~~~i~VGDs~~Di~aA~~aG~-~~i~v~~~~~~~--~~l~~ad~vi~~l~e~~~~~~~l 373 (378)
+|++| ++|++|||+.+|+.||+++|| .++++..+.... ...+.||++++++.|+...++.|
T Consensus 217 lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~l~~l 281 (282)
T 3nuq_A 217 SGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVVSDL 281 (282)
T ss_dssp HTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGTSGGG
T ss_pred cCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHHhhhh
Confidence 99999 999999999999999999999 566776665432 22446899999999998655543
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3e-22 Score=182.54 Aligned_cols=186 Identities=17% Similarity=0.151 Sum_probs=127.0
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHh------hccC--ChHHHHHHHHHHcCCCCCC
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR------KSAG--DEDRMLVLFFNRIGWPTSV 154 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~------~~~g--~~~~~~~~~~~~~g~~~~l 154 (378)
.+++|+||+||||+++.. ..+.+.+.++|++ .....+..+.. ...| ....+...+.+.++.+..
T Consensus 27 ~ik~viFD~DGTL~d~~~----~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~- 98 (229)
T 4dcc_A 27 GIKNLLIDLGGVLINLDR----ERCIENFKKIGFQ---NIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVS- 98 (229)
T ss_dssp CCCEEEECSBTTTBCBCH----HHHHHHHHHHTCT---THHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCCC-
T ss_pred CCCEEEEeCCCeEEeCCh----HHHHHHHHHhCCC---cHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCCC-
Confidence 479999999999999764 4566778888886 22222222110 0001 223344444444443321
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHH------HHhCccc
Q 017067 155 PTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVV------EKLGSER 228 (378)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l------~~lgi~~ 228 (378)
.+...+.+.+. ..+++||+.++|+.|+++ ++++|+||. .......++ +.+|+..
T Consensus 99 ------------~~~~~~~~~~~----~~~~~~~~~~~l~~l~~~-~~~~i~Sn~---~~~~~~~~~~~l~~~~~~~l~~ 158 (229)
T 4dcc_A 99 ------------DKQIDAAWNSF----LVDIPTYKLDLLLKLREK-YVVYLLSNT---NDIHWKWVCKNAFPYRTFKVED 158 (229)
T ss_dssp ------------HHHHHHHHHTT----BCCCCHHHHHHHHHHTTT-SEEEEEECC---CHHHHHHHHHHTSCBTTBCHHH
T ss_pred ------------HHHHHHHHHHH----HHhccHHHHHHHHHHHhc-CcEEEEECC---ChHHHHHHHhhhhhhccCCHHH
Confidence 01112222222 234789999999999999 999999995 456666444 6678888
Q ss_pred cchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHH
Q 017067 229 ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRA 308 (378)
Q Consensus 229 ~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~ 308 (378)
+|+. +++.+++. ..||+|++ |+.
T Consensus 159 ~fd~-i~~~~~~~------------------------------------------~~KP~~~~--------------~~~ 181 (229)
T 4dcc_A 159 YFEK-TYLSYEMK------------------------------------------MAKPEPEI--------------FKA 181 (229)
T ss_dssp HCSE-EEEHHHHT------------------------------------------CCTTCHHH--------------HHH
T ss_pred hCCE-EEeecccC------------------------------------------CCCCCHHH--------------HHH
Confidence 8887 44444432 12666666 999
Q ss_pred HHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCC
Q 017067 309 GAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEF 353 (378)
Q Consensus 309 a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l 353 (378)
+++++|++|++|++|||+.+||++|+++||.+|+++++....+.+
T Consensus 182 ~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k~~L 226 (229)
T 4dcc_A 182 VTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWSHLF 226 (229)
T ss_dssp HHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGGGGG
T ss_pred HHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHHHHh
Confidence 999999999999999999999999999999999999886655443
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-22 Score=185.77 Aligned_cols=206 Identities=14% Similarity=0.121 Sum_probs=135.8
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhH---HHHHHhhccCCh-HHHHHHHHHHcCCCCCCCch
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI---YTDLLRKSAGDE-DRMLVLFFNRIGWPTSVPTN 157 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~---~~~~~~~~~g~~-~~~~~~~~~~~g~~~~l~~~ 157 (378)
+.+++|+||+||||+|+... +..+|++++.++|++. +... +..+....+... ......+.......
T Consensus 9 ~~~k~viFDlDGTL~ds~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------ 78 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLDNDHV-LADLRAHMMREFGAQN---SARYWEIFETLRTELGYADYLGALQRYRLEQPRD------ 78 (231)
T ss_dssp CCSEEEEECCBTTTBCHHHH-HHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTC------
T ss_pred CCCeEEEEcCCCCCEecHHH-HHHHHHHHHHHcCCCc---chHHHHHHHHHHHhcCchHHHHHHHHHHhccccc------
Confidence 45789999999999999986 7889999999998752 1111 222222121111 11111111111111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
...+...+.|.+.. ...+++||+.++|+.|+++| +++|+||+ ....++.+++.+|+.++|+..+...
T Consensus 79 -------~~~~~~~~~~~~~~--~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~---~~~~~~~~l~~~gl~~~f~~~~~~~ 145 (231)
T 2p11_A 79 -------TRLLLMSSFLIDYP--FASRVYPGALNALRHLGARG-PTVILSDG---DVVFQPRKIARSGLWDEVEGRVLIY 145 (231)
T ss_dssp -------TGGGGGHHHHHHCC--GGGGBCTTHHHHHHHHHTTS-CEEEEEEC---CSSHHHHHHHHTTHHHHTTTCEEEE
T ss_pred -------hHHHHHHHHHHHHH--HhCCcCccHHHHHHHHHhCC-CEEEEeCC---CHHHHHHHHHHcCcHHhcCeeEEec
Confidence 00111222232221 23679999999999999999 99999995 4578899999999998887532110
Q ss_pred hhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCC
Q 017067 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (378)
Q Consensus 238 ~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p 317 (378)
. .| |.+ ++.+++ |++|
T Consensus 146 ------------------~----------------------------~K--~~~--------------~~~~~~--~~~~ 161 (231)
T 2p11_A 146 ------------------I----------------------------HK--ELM--------------LDQVME--CYPA 161 (231)
T ss_dssp ------------------S----------------------------SG--GGC--------------HHHHHH--HSCC
T ss_pred ------------------C----------------------------Ch--HHH--------------HHHHHh--cCCC
Confidence 0 02 222 665565 8999
Q ss_pred CcEEEEeCCHh---HHHHHHHcCCCEEEEcCCCC--CCCCCC---CCcEEecCCCcchHHHHHHh
Q 017067 318 RNCFLIAGSQS---GVAGAQRIGMPCVVMRSSLT--SRAEFP---SANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 318 ~~~i~VGDs~~---Di~aA~~aG~~~i~v~~~~~--~~~~l~---~ad~vi~~l~e~~~~~~~l~ 374 (378)
++|++|||+.+ |+.+|+++||++|++.++.. ..+.+. .++++++++.|+...+.++.
T Consensus 162 ~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el~~~l~~~~ 226 (231)
T 2p11_A 162 RHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDLVEMDAEWL 226 (231)
T ss_dssp SEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGGGGCGGGGC
T ss_pred ceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHHHHHHHHHH
Confidence 99999999999 99999999999999988743 222221 48999999999865555443
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.6e-22 Score=176.82 Aligned_cols=184 Identities=15% Similarity=0.161 Sum_probs=124.0
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHh-h-ccC-C-hHHHHHHHHHHcCCCCCCCch
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR-K-SAG-D-EDRMLVLFFNRIGWPTSVPTN 157 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~-~-~~g-~-~~~~~~~~~~~~g~~~~l~~~ 157 (378)
|++++|+||+||||+|+.. ...++..+++++|++. ........... . ..+ . ...+...+....+ ..+.
T Consensus 2 M~~k~viFDlDGTL~d~~~--~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-- 73 (200)
T 3cnh_A 2 MTIKALFWDIGGVLLTNGW--DREQRADVAQRFGLDT--DDFTERHRLAAPELELGRMTLAEYLEQVVFYQP--RDFT-- 73 (200)
T ss_dssp CCCCEEEECCBTTTBCCSS--CHHHHHHHHHHHTCCH--HHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSC--CSSC--
T ss_pred CCceEEEEeCCCeeECCCc--chHHHHHHHHHcCCCH--HHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcC--CCCC--
Confidence 4578999999999999875 3577888999999862 00011111110 0 001 1 1111111111111 0110
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeech
Q 017067 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (378)
Q Consensus 158 ~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~ 237 (378)
.+ .+.+.+.. ...++||+.++|+.|+++| +++|+||. ....+..+++.+|+..+|+. +++.
T Consensus 74 ---------~~----~~~~~~~~-~~~~~~~~~~~l~~l~~~g-~~~i~s~~---~~~~~~~~l~~~~~~~~f~~-~~~~ 134 (200)
T 3cnh_A 74 ---------PE----DFRAVMEE-QSQPRPEVLALARDLGQRY-RMYSLNNE---GRDLNEYRIRTFGLGEFLLA-FFTS 134 (200)
T ss_dssp ---------HH----HHHHHHHH-TCCBCHHHHHHHHHHTTTS-EEEEEECC---CHHHHHHHHHHHTGGGTCSC-EEEH
T ss_pred ---------HH----HHHHHHHh-cCccCccHHHHHHHHHHcC-CEEEEeCC---cHHHHHHHHHhCCHHHhcce-EEee
Confidence 01 11222112 2458999999999999999 99999994 46888899999999999987 4444
Q ss_pred hhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCC
Q 017067 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (378)
Q Consensus 238 ~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p 317 (378)
+++. ..||+|++ |..+++++|++|
T Consensus 135 ~~~~------------------------------------------~~Kp~~~~--------------~~~~~~~~~~~~ 158 (200)
T 3cnh_A 135 SALG------------------------------------------VMKPNPAM--------------YRLGLTLAQVRP 158 (200)
T ss_dssp HHHS------------------------------------------CCTTCHHH--------------HHHHHHHHTCCG
T ss_pred cccC------------------------------------------CCCCCHHH--------------HHHHHHHcCCCH
Confidence 3331 12666555 999999999999
Q ss_pred CcEEEEeCCHhHHHHHHHcCCCEEEEcCCCC
Q 017067 318 RNCFLIAGSQSGVAGAQRIGMPCVVMRSSLT 348 (378)
Q Consensus 318 ~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~ 348 (378)
++|++|||+.+|+.+|+++||+++++.++..
T Consensus 159 ~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~ 189 (200)
T 3cnh_A 159 EEAVMVDDRLQNVQAARAVGMHAVQCVDAAQ 189 (200)
T ss_dssp GGEEEEESCHHHHHHHHHTTCEEEECSCHHH
T ss_pred HHeEEeCCCHHHHHHHHHCCCEEEEECCchh
Confidence 9999999999999999999999999987643
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=180.64 Aligned_cols=130 Identities=10% Similarity=0.124 Sum_probs=105.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.+++||+.++|+.|+ |++++|+||. ....+..+++.+|+..+|+. +++.+++..
T Consensus 92 ~~~~~~~~~~l~~l~--g~~~~i~t~~---~~~~~~~~l~~~gl~~~f~~-~~~~~~~~~-------------------- 145 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA--PLKRAILSNG---APDMLQALVANAGLTDSFDA-VISVDAKRV-------------------- 145 (253)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESS---CHHHHHHHHHHTTCGGGCSE-EEEGGGGTC--------------------
T ss_pred CCCCccHHHHHHHHc--CCCEEEEeCc---CHHHHHHHHHHCCchhhccE-EEEccccCC--------------------
Confidence 578999999999999 9999999994 46888899999999999987 444433321
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
.||+|++ |+.+++++|++|++|++|||+.+|+.+|+++||.+++
T Consensus 146 ----------------------~Kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~ 189 (253)
T 1qq5_A 146 ----------------------FKPHPDS--------------YALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVAR 189 (253)
T ss_dssp ----------------------CTTSHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred ----------------------CCCCHHH--------------HHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEE
Confidence 2555555 9999999999999999999999999999999999999
Q ss_pred EcC-----------------------CCCCCCC-CCCCcEEecCCCcchHHHHHHh
Q 017067 343 MRS-----------------------SLTSRAE-FPSANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 343 v~~-----------------------~~~~~~~-l~~ad~vi~~l~e~~~~~~~l~ 374 (378)
+++ +...... ...+|++++++.|+...+..+.
T Consensus 190 ~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 245 (253)
T 1qq5_A 190 VARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVRGMA 245 (253)
T ss_dssp ECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHHC
T ss_pred ECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHHHHHHHHhc
Confidence 987 3222222 2458999999999987776654
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.9e-21 Score=168.92 Aligned_cols=179 Identities=16% Similarity=0.138 Sum_probs=126.7
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
|.+|+|+||+||||+|+... +..++.++++++|++ .+...+...+.. .... .+...++-. .
T Consensus 4 M~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~---~~~~---~~~~~~~~~-----~---- 64 (190)
T 2fi1_A 4 MKYHDYIWDLGGTLLDNYET-STAAFVETLALYGIT---QDHDSVYQALKV---STPF---AIETFAPNL-----E---- 64 (190)
T ss_dssp CCCSEEEECTBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHHH---CHHH---HHHHHCTTC-----T----
T ss_pred CcccEEEEeCCCCcCCCHHH-HHHHHHHHHHHhCCC---CCHHHHHHHHcc---ccHH---HHHHHhhhH-----H----
Confidence 45799999999999998876 778899999999986 443433333321 1111 122222211 1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
.......+.+.+.+ .... ++||+.++|+.|+++|++++++||.. ..+...++.+|+..+|+. +++.+++.
T Consensus 65 ---~~~~~~~~~~~~~~-~~~~-~~~~~~~~l~~l~~~g~~~~i~t~~~----~~~~~~l~~~~~~~~f~~-~~~~~~~~ 134 (190)
T 2fi1_A 65 ---NFLEKYKENEAREL-EHPI-LFEGVSDLLEDISNQGGRHFLVSHRN----DQVLEILEKTSIAAYFTE-VVTSSSGF 134 (190)
T ss_dssp ---THHHHHHHHHHHHT-TSCC-BCTTHHHHHHHHHHTTCEEEEECSSC----THHHHHHHHTTCGGGEEE-EECGGGCC
T ss_pred ---HHHHHHHHHHHHhc-CcCc-cCcCHHHHHHHHHHCCCcEEEEECCc----HHHHHHHHHcCCHhheee-eeeccccC
Confidence 11222333344444 2233 89999999999999999999999953 457788999999998887 34433221
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|++ |+.+++++|++ +|+
T Consensus 135 ~------------------------------------------~kp~~~~--------------~~~~~~~~~~~--~~~ 156 (190)
T 2fi1_A 135 K------------------------------------------RKPNPES--------------MLYLREKYQIS--SGL 156 (190)
T ss_dssp C------------------------------------------CTTSCHH--------------HHHHHHHTTCS--SEE
T ss_pred C------------------------------------------CCCCHHH--------------HHHHHHHcCCC--eEE
Confidence 1 1555554 99999999998 999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCC
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSL 347 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~ 347 (378)
+|||+.+|+.+|+.+|+.++++.++.
T Consensus 157 ~iGD~~~Di~~a~~aG~~~~~~~~~~ 182 (190)
T 2fi1_A 157 VIGDRPIDIEAGQAAGLDTHLFTSIV 182 (190)
T ss_dssp EEESSHHHHHHHHHTTCEEEECSCHH
T ss_pred EEcCCHHHHHHHHHcCCeEEEECCCC
Confidence 99999999999999999999998763
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-22 Score=181.91 Aligned_cols=208 Identities=11% Similarity=0.120 Sum_probs=124.7
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
+++++|+||+||||+|++.. .++++.+|++. .....+...++ + ...+...+....+...
T Consensus 12 ~~~k~viFD~DGTLvd~~~~------~~~~~~~g~~~--~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~--------- 70 (225)
T 1nnl_A 12 YSADAVCFDVDSTVIREEGI------DELAKICGVED--AVSEMTRRAMG---G-AVPFKAALTERLALIQ--------- 70 (225)
T ss_dssp HHCSEEEEETBTTTBSSCHH------HHHHHHTTCTT--TC----------------CHHHHHHHHHHHHC---------
T ss_pred hhCCEEEEeCcccccccccH------HHHHHHhCCcH--HHHHHHHHHHc---C-CccHHHHHHHHHHHhc---------
Confidence 34789999999999998753 56778888762 11222222221 1 1111111111111000
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc--cchheeechhh
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIKIVGNEE 239 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~--~f~~~iv~~~~ 239 (378)
...+.+.+.+.....+++||+.++|+.|+++|++++|+|| +....++.+++.+|+.. +|+..+....
T Consensus 71 -------~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~~~f~~~~~~~~- 139 (225)
T 1nnl_A 71 -------PSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISG---GFRSIVEHVASKLNIPATNVFANRLKFYF- 139 (225)
T ss_dssp -------CCHHHHHHHHHHSCCCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCCGGGEEEECEEECT-
T ss_pred -------CCHHHHHHHHHhccCCCCccHHHHHHHHHHCCCcEEEEeC---ChHHHHHHHHHHcCCCcccEEeeeEEEcC-
Confidence 0011122333233467999999999999999999999999 55688899999999974 6665321100
Q ss_pred HHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCc
Q 017067 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (378)
Q Consensus 240 ~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~ 319 (378)
+..+.+.... .|. ++++++|++ |+.+++++|+ ++
T Consensus 140 ------~~~~~~~~~~------------------------------~~~-----~~~~~Kp~~---~~~~~~~~~~--~~ 173 (225)
T 1nnl_A 140 ------NGEYAGFDET------------------------------QPT-----AESGGKGKV---IKLLKEKFHF--KK 173 (225)
T ss_dssp ------TSCEEEECTT------------------------------SGG-----GSTTHHHHH---HHHHHHHHCC--SC
T ss_pred ------CCcEecCCCC------------------------------Ccc-----cCCCchHHH---HHHHHHHcCC--Cc
Confidence 0000110000 000 001222333 8999999998 89
Q ss_pred EEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchH
Q 017067 320 CFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADL 368 (378)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~ 368 (378)
|++|||+.+|+.+|+++|+ +|.+............++++++++.|+..
T Consensus 174 ~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 221 (225)
T 1nnl_A 174 IIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVELLG 221 (225)
T ss_dssp EEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGGCC
T ss_pred EEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHHHH
Confidence 9999999999999999999 88886442222222348999999999753
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.86 E-value=9.9e-22 Score=175.89 Aligned_cols=180 Identities=13% Similarity=0.144 Sum_probs=119.2
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHH--------HhhccCChHHHHHHHHHHcCCCCCC
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDL--------LRKSAGDEDRMLVLFFNRIGWPTSV 154 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~g~~~~l 154 (378)
.+++|+||+||||+|+... +. ..++.++|++. ....+..+ +.........+...+...++....
T Consensus 4 m~k~iiFDlDGTL~d~~~~-~~---~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~- 75 (211)
T 2i6x_A 4 MIRNIVFDLGGVLIHLNRE-ES---IRRFKAIGVAD---IEEMLDPYLQKGLFLDLESGRKSEEEFRTELSRYIGKELT- 75 (211)
T ss_dssp CCSEEEECSBTTTEEECHH-HH---HHHHHHTTCTT---HHHHTCC---CCHHHHHHHSSSCHHHHHHHHHHHHTSCCC-
T ss_pred cceEEEEeCCCeeEecchH-HH---HHHHHHhCCch---HHHHHHHHhCchHHHHHHcCCCCHHHHHHHHHHHhCCCCC-
Confidence 4789999999999998874 21 56677778752 11111110 100000112222223333321100
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH------hCccc
Q 017067 155 PTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK------LGSER 228 (378)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~------lgi~~ 228 (378)
.+ .+.+.+......++||+.++|+.|++ |++++|+||. .......+++. +|+..
T Consensus 76 --------~~--------~~~~~~~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~~---~~~~~~~~~~~l~~~~~~~l~~ 135 (211)
T 2i6x_A 76 --------YQ--------QVYDALLGFLEEISAEKFDYIDSLRP-DYRLFLLSNT---NPYVLDLAMSPRFLPSGRTLDS 135 (211)
T ss_dssp --------HH--------HHHHHHGGGEEEECHHHHHHHHHHTT-TSEEEEEECC---CHHHHHHHTSTTSSTTCCCGGG
T ss_pred --------HH--------HHHHHHHHhhcccChHHHHHHHHHHc-CCeEEEEeCC---CHHHHHHHHhhhccccccCHHH
Confidence 00 11111112224689999999999999 9999999994 46777778887 79999
Q ss_pred cchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHH
Q 017067 229 ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRA 308 (378)
Q Consensus 229 ~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~ 308 (378)
+|+. +++.+++. ..||+|++ |+.
T Consensus 136 ~f~~-~~~~~~~~------------------------------------------~~Kp~~~~--------------~~~ 158 (211)
T 2i6x_A 136 FFDK-VYASCQMG------------------------------------------KYKPNEDI--------------FLE 158 (211)
T ss_dssp GSSE-EEEHHHHT------------------------------------------CCTTSHHH--------------HHH
T ss_pred HcCe-EEeecccC------------------------------------------CCCCCHHH--------------HHH
Confidence 8887 44443331 12666555 999
Q ss_pred HHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCC
Q 017067 309 GAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSL 347 (378)
Q Consensus 309 a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~ 347 (378)
+++++|++|++|++|||+.+|+.+|+++|+.+++++++.
T Consensus 159 ~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~ 197 (211)
T 2i6x_A 159 MIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNGE 197 (211)
T ss_dssp HHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred HHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHH
Confidence 999999999999999999999999999999999998763
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.4e-21 Score=172.11 Aligned_cols=138 Identities=13% Similarity=0.220 Sum_probs=110.3
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhH-HHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV-ERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~-~~~~~~~~v~g~~v~~~~~~~ 261 (378)
.+++||+.++|+.|+++|++++|+||........+..+++.+|+..+|+.. ++.++. ... +
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i-~~~~~~~~~~-------------~---- 94 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFI-YASNSELQPG-------------K---- 94 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEE-EECCTTSSTT-------------C----
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEE-EEcccccccc-------------C----
Confidence 569999999999999999999999996533347889999999999999874 333321 000 0
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCC-HhHHHHHHHcCCCE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPC 340 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~ 340 (378)
..||+|++ |+.+++++|++|++|+||||+ .+|+.+|+++||++
T Consensus 95 ----------------------~~KP~p~~--------------~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~ 138 (189)
T 3ib6_A 95 ----------------------MEKPDKTI--------------FDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHA 138 (189)
T ss_dssp ----------------------CCTTSHHH--------------HHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEE
T ss_pred ----------------------CCCcCHHH--------------HHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 12666665 999999999999999999999 79999999999999
Q ss_pred EEEcCCCCC--CCCCC--CCcEEec--CCCcchHHHHHHh
Q 017067 341 VVMRSSLTS--RAEFP--SANAVMD--GFGGADLTISKLR 374 (378)
Q Consensus 341 i~v~~~~~~--~~~l~--~ad~vi~--~l~e~~~~~~~l~ 374 (378)
|++.++... ...+. .++++++ ++.++...+.-+.
T Consensus 139 i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~ 178 (189)
T 3ib6_A 139 IWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLK 178 (189)
T ss_dssp EEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHH
T ss_pred EEECCccccccccccccCCCcceeccccHHhHHHHHHHHH
Confidence 999988663 34444 6899999 9999987665443
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=7.8e-22 Score=177.06 Aligned_cols=127 Identities=9% Similarity=0.103 Sum_probs=93.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.+++||+.++|+.|+++|++++++|| +....++.+++.+|+..+|+..+...+. .+....++. +
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~---~~~~~~~~~l~~~gl~~~f~~~~~~~~~----~~~~~~~~~-~-------- 137 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSG---GFDLATNHYRDLLHLDAAFSNTLIVEND----ALNGLVTGH-M-------- 137 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEE---EEHHHHHHHHHHHTCSEEEEEEEEEETT----EEEEEEEES-C--------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcC---CchhHHHHHHHHcCcchhccceeEEeCC----EEEeeeccC-C--------
Confidence 67999999999999999999999999 5578899999999999999874322211 111101110 0
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
+..+|++.+ |+.+++++|++|++|++|||+.+|+.+|+.+|+.+++
T Consensus 138 -------------------------------~~~k~k~~~---~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~ 183 (217)
T 3m1y_A 138 -------------------------------MFSHSKGEM---LLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF 183 (217)
T ss_dssp -------------------------------CSTTHHHHH---HHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE
T ss_pred -------------------------------CCCCChHHH---HHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE
Confidence 012223333 9999999999999999999999999999999998877
Q ss_pred EcCCCCCCCCCCCCcEEecCC
Q 017067 343 MRSSLTSRAEFPSANAVMDGF 363 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~vi~~l 363 (378)
+ + .......||+|+++.
T Consensus 184 -~-~--~~~l~~~ad~v~~~~ 200 (217)
T 3m1y_A 184 -N-A--KEVLKQHATHCINEP 200 (217)
T ss_dssp -S-C--CHHHHTTCSEEECSS
T ss_pred -C-c--cHHHHHhcceeeccc
Confidence 2 2 222234589999754
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-21 Score=171.48 Aligned_cols=131 Identities=10% Similarity=0.052 Sum_probs=99.7
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCC----c--------hHHHHHHHHHhC--ccccchheeechhhHHHhhhhcc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS----G--------DRIARSVVEKLG--SERISKIKIVGNEEVERSLYGQF 248 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~----~--------~~~~~~~l~~lg--i~~~f~~~iv~~~~~~~~~~~~~ 248 (378)
.+++||+.++|+.|+++|++++|+||.... . ...+...++.+| ++.+|...+.+.++.
T Consensus 26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~-------- 97 (179)
T 3l8h_A 26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGC-------- 97 (179)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSCC--------
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCCC--------
Confidence 358999999999999999999999995410 0 045677788888 554442211111111
Q ss_pred ccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHh
Q 017067 249 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS 328 (378)
Q Consensus 249 v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~ 328 (378)
. .+||+|++ |+.+++++|++|++|+||||+.+
T Consensus 98 ------~----------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~ 129 (179)
T 3l8h_A 98 ------A----------------------------CRKPLPGM--------------YRDIARRYDVDLAGVPAVGDSLR 129 (179)
T ss_dssp ------S----------------------------SSTTSSHH--------------HHHHHHHHTCCCTTCEEEESSHH
T ss_pred ------C----------------------------CCCCCHHH--------------HHHHHHHcCCCHHHEEEECCCHH
Confidence 1 12666666 99999999999999999999999
Q ss_pred HHHHHHHcCCCEEEEcCCCCCCCCC----CCCcEEecCCCcchHH
Q 017067 329 GVAGAQRIGMPCVVMRSSLTSRAEF----PSANAVMDGFGGADLT 369 (378)
Q Consensus 329 Di~aA~~aG~~~i~v~~~~~~~~~l----~~ad~vi~~l~e~~~~ 369 (378)
|+++|+++||++|+|.++......+ ..||++++++.|+...
T Consensus 130 Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~ 174 (179)
T 3l8h_A 130 DLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQ 174 (179)
T ss_dssp HHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHH
T ss_pred HHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHH
Confidence 9999999999999999987655433 5689999999998543
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.7e-21 Score=174.80 Aligned_cols=127 Identities=13% Similarity=0.203 Sum_probs=96.1
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
..++||+.++|+.|+++|++++|+||+. ...+ ++.++ .+|+. +++.+++.
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~---~~~~---~~~~~--~~~d~-v~~~~~~~--------------------- 84 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELP---EALS---TPLAA--PVNDW-MIAAPRPT--------------------- 84 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSC---HHHH---HHHHT--TTTTT-CEECCCCS---------------------
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCCh---HHHH---HHhcC--ccCCE-EEECCcCC---------------------
Confidence 4589999999999999999999999953 3443 33333 34555 33333321
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCC-CcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-RNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p-~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
..||+|++ |..+++++|+.| ++|+||||+.+||++|+++||.+|
T Consensus 85 ---------------------~~KP~p~~--------------~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i 129 (196)
T 2oda_A 85 ---------------------AGWPQPDA--------------CWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTI 129 (196)
T ss_dssp ---------------------SCTTSTHH--------------HHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEE
T ss_pred ---------------------CCCCChHH--------------HHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEE
Confidence 12777666 999999999975 899999999999999999999999
Q ss_pred EEcCCCCC-----------------------CCCC--CCCcEEecCCCcchHHHHHHh
Q 017067 342 VMRSSLTS-----------------------RAEF--PSANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 342 ~v~~~~~~-----------------------~~~l--~~ad~vi~~l~e~~~~~~~l~ 374 (378)
+|.++... ..++ ..++++++++.|+...+..+.
T Consensus 130 ~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi~~~~eL~~~l~~~~ 187 (196)
T 2oda_A 130 GLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVIDHLGELESCLADIA 187 (196)
T ss_dssp EESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHHH
T ss_pred EEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEeCCHHHHHHHHHHHH
Confidence 99988642 1111 358999999999977666554
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-21 Score=174.10 Aligned_cols=106 Identities=15% Similarity=0.214 Sum_probs=84.3
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH-hCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~-lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
..++||+.++|+.|+++|++++|+||.. ......+++. +|+..+|+. ++++++..
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~---~~~~~~~~~~~~~l~~~f~~-~~~~~~~~-------------------- 145 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTN---RLHTTFWPEEYPEIRDAADH-IYLSQDLG-------------------- 145 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCC---CCTTSCCGGGCHHHHHHCSE-EEEHHHHT--------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCC---hHHHHHHHHhccChhhheee-EEEecccC--------------------
Confidence 5689999999999999999999999954 3444444555 677777776 34443321
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
..||+|++ |..+++++|++|++|++|||+.+|+.+|+++|++++
T Consensus 146 ----------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~ 189 (206)
T 2b0c_A 146 ----------------------MRKPEARI--------------YQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSI 189 (206)
T ss_dssp ----------------------CCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred ----------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEE
Confidence 12666555 999999999999999999999999999999999999
Q ss_pred EEcCCCC
Q 017067 342 VMRSSLT 348 (378)
Q Consensus 342 ~v~~~~~ 348 (378)
++.++..
T Consensus 190 ~~~~~~~ 196 (206)
T 2b0c_A 190 LVKDKTT 196 (206)
T ss_dssp ECCSTTH
T ss_pred EecCCch
Confidence 9987743
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.9e-20 Score=188.73 Aligned_cols=192 Identities=16% Similarity=0.176 Sum_probs=120.1
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
|++|+|+||+||||++.... ..+...+..++++. ......+... +....+..... +. ...++...
T Consensus 1 M~~k~viFD~DGTL~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~---~~---~~~~~~~~ 65 (555)
T 3i28_A 1 MTLRAAVFDLDGVLALPAVF---GVLGRTEEALALPR-----GLLNDAFQKG-GPEGATTRLMK---GE---ITLSQWIP 65 (555)
T ss_dssp ---CEEEECTBTTTEESCTH---HHHHHHHHHTTCCT-----THHHHHHHTT-GGGSHHHHHHT---TS---SCHHHHHH
T ss_pred CceEEEEEecCCeeecchhH---HHHHHHHHHhCCcH-----HHHHHHHhcc-CcccchhHHhc---CC---CCHHHHHH
Confidence 35799999999999977653 67777888888763 2222332211 11111111111 10 01111100
Q ss_pred HHHHHHHH--------------HHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHh--C
Q 017067 162 FVKNVLQE--------------KKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL--G 225 (378)
Q Consensus 162 ~i~~~~~~--------------~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~l--g 225 (378)
........ ..+.+.+.... ..++||+.++|+.|+++|++++|+||+.. ........+... |
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~-~~~~~~~~~~~~~~~ 142 (555)
T 3i28_A 66 LMEENCRKCSETAKVCLPKNFSIKEIFDKAISA--RKINRPMLQAALMLRKKGFTTAILTNTWL-DDRAERDGLAQLMCE 142 (555)
T ss_dssp HHHHHHHHHHHHTTCCCCTTCCHHHHHHHHHHH--CEECHHHHHHHHHHHHTTCEEEEEECCCC-CCSTTHHHHHHHHHH
T ss_pred HHHHHHHHhhhccCCCCCccccHHHHHHHhHhh--cCcChhHHHHHHHHHHCCCEEEEEeCCCc-cccchhhHHHHHhhh
Confidence 00000000 22233333322 57999999999999999999999999510 112222333433 7
Q ss_pred ccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHH
Q 017067 226 SERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 305 (378)
Q Consensus 226 i~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a 305 (378)
+.++|+. +++++++.. .||+|++
T Consensus 143 l~~~fd~-i~~~~~~~~------------------------------------------~KP~p~~-------------- 165 (555)
T 3i28_A 143 LKMHFDF-LIESCQVGM------------------------------------------VKPEPQI-------------- 165 (555)
T ss_dssp HHTTSSE-EEEHHHHTC------------------------------------------CTTCHHH--------------
T ss_pred hhhheeE-EEeccccCC------------------------------------------CCCCHHH--------------
Confidence 8889988 555555432 2777776
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCC
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLT 348 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~ 348 (378)
|+.+++++|++|++|++|||+.+||++|+++||++|++.++..
T Consensus 166 ~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~~~ 208 (555)
T 3i28_A 166 YKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDT 208 (555)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECSSHHH
T ss_pred HHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEECCCcc
Confidence 9999999999999999999999999999999999999987643
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-19 Score=164.15 Aligned_cols=193 Identities=11% Similarity=0.108 Sum_probs=120.2
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHH----HHHhh--ccC-ChHHHHHHHHHHc-CCCCCC
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYT----DLLRK--SAG-DEDRMLVLFFNRI-GWPTSV 154 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~----~~~~~--~~g-~~~~~~~~~~~~~-g~~~~l 154 (378)
.+++|+||+||||+|++.. ..|...+.+.++.. ....+. .+... .+. ....+...+...+ +..
T Consensus 3 ~~k~viFDlDGTL~d~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--- 73 (232)
T 3fvv_A 3 TRRLALFDLDHTLLPLDSD---YQWADFLARTGRAG---DPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHS--- 73 (232)
T ss_dssp CCEEEEECCBTTTBSSCHH---HHHHHHHHHTTSSS---SHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHTSC---
T ss_pred CCcEEEEeCCCCCcCCchH---HHHHHHHHHcCCCC---ccHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhcCCC---
Confidence 4689999999999999875 46777777766530 111111 11100 011 1122222222111 111
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchhee
Q 017067 155 PTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 234 (378)
Q Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~i 234 (378)
.+.+.+...+.+.+.+. ..++||+.++|+.|+++|++++|+|| +....++.+++.+|+..++...+
T Consensus 74 --------~~~~~~~~~~~~~~~~~---~~~~~g~~~~l~~l~~~g~~~~ivS~---~~~~~~~~~~~~~g~~~~~~~~~ 139 (232)
T 3fvv_A 74 --------PVELAAWHEEFMRDVIR---PSLTVQAVDVVRGHLAAGDLCALVTA---TNSFVTAPIARAFGVQHLIATDP 139 (232)
T ss_dssp --------HHHHHHHHHHHHHHTTG---GGCCHHHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCCEEEECEE
T ss_pred --------HHHHHHHHHHHHHHhhh---hhcCHHHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCCCEEEEcce
Confidence 11222233333333331 24799999999999999999999999 55789999999999987776543
Q ss_pred echhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcC
Q 017067 235 VGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE 314 (378)
Q Consensus 235 v~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lg 314 (378)
...+.. + .+ ||.+.. +..++.+.. ++.+++++|
T Consensus 140 ~~~~~~----~----------~g----------------------------~~~~~~--~~~~~K~~~---~~~~~~~~~ 172 (232)
T 3fvv_A 140 EYRDGR----Y----------TG----------------------------RIEGTP--SFREGKVVR---VNQWLAGMG 172 (232)
T ss_dssp EEETTE----E----------EE----------------------------EEESSC--SSTHHHHHH---HHHHHHHTT
T ss_pred EEECCE----E----------ee----------------------------eecCCC--CcchHHHHH---HHHHHHHcC
Confidence 322111 1 00 333222 112333333 888999999
Q ss_pred ---CCCCcEEEEeCCHhHHHHHHHcCCCEEEEcC
Q 017067 315 ---KPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (378)
Q Consensus 315 ---v~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (378)
++|++|++|||+.+|+.+++.+|+.+++.++
T Consensus 173 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~ 206 (232)
T 3fvv_A 173 LALGDFAESYFYSDSVNDVPLLEAVTRPIAANPS 206 (232)
T ss_dssp CCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCC
T ss_pred CCcCchhheEEEeCCHhhHHHHHhCCCeEEECcC
Confidence 9999999999999999999999998877443
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.4e-19 Score=178.22 Aligned_cols=141 Identities=16% Similarity=0.112 Sum_probs=108.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchh-eeechhhHHHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI-KIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~-~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
++++||+.++|+.|+++|++++|+||+ ....+..+++.+|+.++|+. .+++++++.... +....-
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~---~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~-------~~~~~~---- 279 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGR---PYTETVVPFENLGLLPYFEADFIATASDVLEAE-------NMYPQA---- 279 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHH-------HHSTTS----
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCC---cHHHHHHHHHHcCChHhcCCCEEEecccccccc-------cccccc----
Confidence 478999999999999999999999994 46788999999999999982 367776653200 000000
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcC--------------CCCCcEEEEeCCH
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--------------KPVRNCFLIAGSQ 327 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lg--------------v~p~~~i~VGDs~ 327 (378)
| -..||+|++ |..+++++| ++|++|+||||+.
T Consensus 280 ------k--------------p~~KP~P~~--------------~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~ 325 (384)
T 1qyi_A 280 ------R--------------PLGKPNPFS--------------YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL 325 (384)
T ss_dssp ------C--------------CCCTTSTHH--------------HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSH
T ss_pred ------c--------------CCCCCCHHH--------------HHHHHHHcCCccccccccccccCCCCcCeEEEcCCH
Confidence 0 002555555 999999999 9999999999999
Q ss_pred hHHHHHHHcCCCEEEEcCCCCC---CCCC--CCCcEEecCCCcchHHHH
Q 017067 328 SGVAGAQRIGMPCVVMRSSLTS---RAEF--PSANAVMDGFGGADLTIS 371 (378)
Q Consensus 328 ~Di~aA~~aG~~~i~v~~~~~~---~~~l--~~ad~vi~~l~e~~~~~~ 371 (378)
+|+++|++|||++|+|.++... ..++ ..||++++++.|+...+.
T Consensus 326 ~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL~~~l~ 374 (384)
T 1qyi_A 326 ADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLD 374 (384)
T ss_dssp HHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHS
T ss_pred HHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHHHHHHHH
Confidence 9999999999999999987642 2233 368999999999865543
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-20 Score=182.07 Aligned_cols=203 Identities=11% Similarity=0.130 Sum_probs=127.2
Q ss_pred CCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhH
Q 017067 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~ 160 (378)
.+++++|+|||||||++++.. ......+|+. .....+......+...+...+..++......+.
T Consensus 105 ~~~~kaviFDlDGTLid~~~~------~~la~~~g~~------~~~~~~~~~~~~g~~~~~~~l~~~~~~l~~~~~---- 168 (317)
T 4eze_A 105 LPANGIIAFDMDSTFIAEEGV------DEIARELGMS------TQITAITQQAMEGKLDFNASFTRRIGMLKGTPK---- 168 (317)
T ss_dssp CCCSCEEEECTBTTTBSSCHH------HHHHHHTTCH------HHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBH----
T ss_pred CCCCCEEEEcCCCCccCCccH------HHHHHHhCCc------HHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCH----
Confidence 457899999999999998874 4555666764 222222221111222222233333322221110
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhH
Q 017067 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (378)
Q Consensus 161 ~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~ 240 (378)
+.+.+.. ..++++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+..+...+.
T Consensus 169 -----------~~i~~~~--~~~~l~pg~~e~L~~Lk~~G~~v~IvSn---~~~~~~~~~l~~lgl~~~f~~~l~~~dg- 231 (317)
T 4eze_A 169 -----------AVLNAVC--DRMTLSPGLLTILPVIKAKGFKTAIISG---GLDIFTQRLKARYQLDYAFSNTVEIRDN- 231 (317)
T ss_dssp -----------HHHHHHH--HTCCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHTCSEEEEECEEEETT-
T ss_pred -----------HHHHHHH--hCCEECcCHHHHHHHHHhCCCEEEEEeC---ccHHHHHHHHHHcCCCeEEEEEEEeeCC-
Confidence 1111122 1357999999999999999999999999 5679999999999999998864332211
Q ss_pred HHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcE
Q 017067 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (378)
Q Consensus 241 ~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~ 320 (378)
.+...+.+.. ..++|++++ |+.+++++|++|++|
T Consensus 232 ---~~tg~i~~~~----------------------------------------~~~kpkp~~---~~~~~~~lgv~~~~~ 265 (317)
T 4eze_A 232 ---VLTDNITLPI----------------------------------------MNAANKKQT---LVDLAARLNIATENI 265 (317)
T ss_dssp ---EEEEEECSSC----------------------------------------CCHHHHHHH---HHHHHHHHTCCGGGE
T ss_pred ---eeeeeEeccc----------------------------------------CCCCCCHHH---HHHHHHHcCCCcceE
Confidence 1111111110 012233333 999999999999999
Q ss_pred EEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEec--CCCcc
Q 017067 321 FLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMD--GFGGA 366 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~--~l~e~ 366 (378)
++|||+.+|+.+|+++|+.+++ . + .......++.++. ++.++
T Consensus 266 i~VGDs~~Di~aa~~AG~~va~-~-~--~~~~~~~a~~~i~~~~L~~l 309 (317)
T 4eze_A 266 IACGDGANDLPMLEHAGTGIAW-K-A--KPVVREKIHHQINYHGFELL 309 (317)
T ss_dssp EEEECSGGGHHHHHHSSEEEEE-S-C--CHHHHHHCCEEESSSCGGGG
T ss_pred EEEeCCHHHHHHHHHCCCeEEe-C-C--CHHHHHhcCeeeCCCCHHHH
Confidence 9999999999999999998777 2 2 1111223566553 55554
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.8e-21 Score=174.87 Aligned_cols=62 Identities=10% Similarity=0.221 Sum_probs=55.9
Q ss_pred HHHHHHHcCCCCCcEEEEeCC-HhHHHHHHHcCCCEEEEcCCCCCCCCC----CCCcEEecCCCcch
Q 017067 306 LRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSSLTSRAEF----PSANAVMDGFGGAD 367 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~~~l----~~ad~vi~~l~e~~ 367 (378)
|+.+++++|++|++|++|||+ .||++||+.+|+.+++|.++....+++ ..||++++++.|+.
T Consensus 182 ~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el~ 248 (250)
T 2c4n_A 182 IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred HHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHhh
Confidence 999999999999999999999 699999999999999999987765555 35899999999873
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.3e-20 Score=164.53 Aligned_cols=132 Identities=11% Similarity=0.079 Sum_probs=93.3
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc--ccchheeechhhHHHhhhhccccccccccCcch
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~--~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~ 260 (378)
..++||+.++|+.|+++|++++|+|| +....++..++.+|+. .+|...++..++. .+. .+.
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------~~~----- 143 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSG---GLSESIQPFADYLNIPRENIFAVETIWNSDG---SFK------ELD----- 143 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHTCCGGGEEEEEEEECTTS---BEE------EEE-----
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcC---CcHHHHHHHHHHcCCCcccEEEeeeeecCCC---cee------ccC-----
Confidence 44889999999999999999999999 5578899999999994 4554332221110 000 000
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 261 ~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
..||+|.. .+..+++.+|++|++|++|||+.+|+.|+ ++||.+
T Consensus 144 -----------------------~~~~~~~~-------------~~~~l~~~~~~~~~~~~~vGD~~~Di~~~-~~G~~~ 186 (219)
T 3kd3_A 144 -----------------------NSNGACDS-------------KLSAFDKAKGLIDGEVIAIGDGYTDYQLY-EKGYAT 186 (219)
T ss_dssp -----------------------CTTSTTTC-------------HHHHHHHHGGGCCSEEEEEESSHHHHHHH-HHTSCS
T ss_pred -----------------------CCCCCccc-------------HHHHHHHHhCCCCCCEEEEECCHhHHHHH-hCCCCc
Confidence 01444332 15566677799999999999999999998 689998
Q ss_pred EEEcCCCCCCC-C-CCCCcEEecCCCcchH
Q 017067 341 VVMRSSLTSRA-E-FPSANAVMDGFGGADL 368 (378)
Q Consensus 341 i~v~~~~~~~~-~-l~~ad~vi~~l~e~~~ 368 (378)
+++..+..... . ...||++++++.|+..
T Consensus 187 ~~v~~~~~~~~~~~~~~ad~v~~~~~el~~ 216 (219)
T 3kd3_A 187 KFIAYMEHIEREKVINLSKYVARNVAELAS 216 (219)
T ss_dssp EEEEECSSCCCHHHHHHCSEEESSHHHHHH
T ss_pred EEEeccCccccHHHHhhcceeeCCHHHHHH
Confidence 87765543322 2 2348999999998753
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.80 E-value=6e-20 Score=164.34 Aligned_cols=133 Identities=9% Similarity=0.010 Sum_probs=100.1
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
..+++||+.++|+.|+++ ++++|+|| +....++.+++.+|+..+|...+++.++... .
T Consensus 67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~---~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~-------------~----- 124 (206)
T 1rku_A 67 TLKPLEGAVEFVDWLRER-FQVVILSD---TFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV-------------V----- 124 (206)
T ss_dssp TCCCCTTHHHHHHHHHTT-SEEEEEEE---EEHHHHHHHHHHTTCCCEEEEEEEECTTSCE-------------E-----
T ss_pred hcCCCccHHHHHHHHHhc-CcEEEEEC---ChHHHHHHHHHHcCCcceecceeEEcCCceE-------------E-----
Confidence 467899999999999999 99999999 4568889999999999988422333222100 0
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhh-ccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 262 LATEARKAVSAQKQEIAEEVASML-KLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~-KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
.. ||.|.+ |..+++++++.|++|++|||+.+|+.+|+++||.+
T Consensus 125 ----------------------~~~~p~p~~--------------~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~ 168 (206)
T 1rku_A 125 ----------------------GYQLRQKDP--------------KRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGI 168 (206)
T ss_dssp ----------------------EEECCSSSH--------------HHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEE
T ss_pred ----------------------eeecCCCch--------------HHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccE
Confidence 00 244444 88999999999999999999999999999999986
Q ss_pred EEEcCCCCCCCCCC--CCcEE-ecCCCcchHHHHHHhhcc
Q 017067 341 VVMRSSLTSRAEFP--SANAV-MDGFGGADLTISKLRHSQ 377 (378)
Q Consensus 341 i~v~~~~~~~~~l~--~ad~v-i~~l~e~~~~~~~l~~~~ 377 (378)
++ .. ..++. .++++ ++++.++...+.++..|+
T Consensus 169 ~~-~~----~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 203 (206)
T 1rku_A 169 LF-HA----PENVIREFPQFPAVHTYEDLKREFLKASSRS 203 (206)
T ss_dssp EE-SC----CHHHHHHCTTSCEECSHHHHHHHHHHHCSSC
T ss_pred EE-CC----cHHHHHHHhhhccccchHHHHHHHHHHhccc
Confidence 64 21 12222 34564 999999988787776653
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.6e-19 Score=178.11 Aligned_cols=200 Identities=15% Similarity=0.130 Sum_probs=127.2
Q ss_pred CCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhH
Q 017067 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~ 160 (378)
..++++|+|||||||++++.. ..+...+|+. .....+......+...+...+..++..-..++.+.
T Consensus 182 ~~~~k~viFD~DgTLi~~~~~------~~la~~~g~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-- 247 (415)
T 3p96_A 182 RRAKRLIVFDVDSTLVQGEVI------EMLAAKAGAE------GQVAAITDAAMRGELDFAQSLQQRVATLAGLPATV-- 247 (415)
T ss_dssp TTCCCEEEECTBTTTBSSCHH------HHHHHHTTCH------HHHHHHHHHHHTTCSCHHHHHHHHHHTTTTCBTHH--
T ss_pred ccCCcEEEEcCcccCcCCchH------HHHHHHcCCc------HHHHHHHHHHhcCCcCHHHHHHHHHHHhcCCCHHH--
Confidence 456889999999999998863 5555566764 23333332222223223333444433222222111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhH
Q 017067 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (378)
Q Consensus 161 ~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~ 240 (378)
++ .+.+ .++++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|...+...+
T Consensus 248 --~~--------~~~~-----~~~~~pg~~e~l~~Lk~~G~~~~ivS~---~~~~~~~~~~~~lgl~~~~~~~l~~~d-- 307 (415)
T 3p96_A 248 --ID--------EVAG-----QLELMPGARTTLRTLRRLGYACGVVSG---GFRRIIEPLAEELMLDYVAANELEIVD-- 307 (415)
T ss_dssp --HH--------HHHH-----HCCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCSEEEEECEEEET--
T ss_pred --HH--------HHHH-----hCccCccHHHHHHHHHHCCCEEEEEcC---CcHHHHHHHHHHcCccceeeeeEEEeC--
Confidence 11 1111 246999999999999999999999999 567999999999999988765321111
Q ss_pred HHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcE
Q 017067 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (378)
Q Consensus 241 ~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~ 320 (378)
+.+...+.+... ..||.|++ |+.+++++|++|++|
T Consensus 308 --g~~tg~~~~~v~-----------------------------~~kpk~~~--------------~~~~~~~~gi~~~~~ 342 (415)
T 3p96_A 308 --GTLTGRVVGPII-----------------------------DRAGKATA--------------LREFAQRAGVPMAQT 342 (415)
T ss_dssp --TEEEEEECSSCC-----------------------------CHHHHHHH--------------HHHHHHHHTCCGGGE
T ss_pred --CEEEeeEccCCC-----------------------------CCcchHHH--------------HHHHHHHcCcChhhE
Confidence 111111111100 01334333 999999999999999
Q ss_pred EEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCC
Q 017067 321 FLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGF 363 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l 363 (378)
++|||+.+|+.+|+++|+.+++ + + .......|++++++.
T Consensus 343 i~vGD~~~Di~~a~~aG~~va~-~-~--~~~~~~~ad~~i~~~ 381 (415)
T 3p96_A 343 VAVGDGANDIDMLAAAGLGIAF-N-A--KPALREVADASLSHP 381 (415)
T ss_dssp EEEECSGGGHHHHHHSSEEEEE-S-C--CHHHHHHCSEEECSS
T ss_pred EEEECCHHHHHHHHHCCCeEEE-C-C--CHHHHHhCCEEEccC
Confidence 9999999999999999998887 2 2 112223478887643
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.79 E-value=5.6e-20 Score=171.43 Aligned_cols=62 Identities=10% Similarity=0.254 Sum_probs=56.1
Q ss_pred HHHHHHHcCCCCCcEEEEeCC-HhHHHHHHHcCCCEEEEcCCCCCCCCCC----CCcEEecCCCcch
Q 017067 306 LRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSSLTSRAEFP----SANAVMDGFGGAD 367 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~~~l~----~ad~vi~~l~e~~ 367 (378)
|+.+++++|++|++|+||||+ .+|+.+|+++||++|+|.++....+++. .||++++++.|+.
T Consensus 189 ~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~ 255 (264)
T 1yv9_A 189 MERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT 255 (264)
T ss_dssp HHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred HHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHh
Confidence 999999999999999999999 5999999999999999999887665554 5899999999874
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.78 E-value=8.4e-20 Score=167.99 Aligned_cols=132 Identities=17% Similarity=0.128 Sum_probs=93.4
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.+++||+.++|+.|+++|++++|+|| +....++.+++ |+..+ +. +++++..... ..+...
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~---~~~~~~~~~l~--~l~~~-~~-v~~~~~~~~~--------~~~~~~----- 135 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISG---GMDFFVYPLLE--GIVEK-DR-IYCNHASFDN--------DYIHID----- 135 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEE---EEHHHHHHHHT--TTSCG-GG-EEEEEEECSS--------SBCEEE-----
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeC---CcHHHHHHHHh--cCCCC-Ce-EEeeeeEEcC--------CceEEe-----
Confidence 57999999999999999999999999 44677777777 77665 44 4554332110 000000
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHH-------HHHHHcCCCCCcEEEEeCCHhHHHHHHH
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALR-------AGAEYAEKPVRNCFLIAGSQSGVAGAQR 335 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~-------~a~~~lgv~p~~~i~VGDs~~Di~aA~~ 335 (378)
..||+|.+. |. .+++++|++|++|+||||+.+|+.+|++
T Consensus 136 ---------------------~~kp~p~~~-------------~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ 181 (236)
T 2fea_A 136 ---------------------WPHSCKGTC-------------SNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKL 181 (236)
T ss_dssp ---------------------CTTCCCTTC-------------CSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHT
T ss_pred ---------------------cCCCCcccc-------------ccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHh
Confidence 027776620 33 6789999999999999999999999999
Q ss_pred cCCCEEEEcCCCCCCCCC--C-CCcEEecCCCcchHHHHH
Q 017067 336 IGMPCVVMRSSLTSRAEF--P-SANAVMDGFGGADLTISK 372 (378)
Q Consensus 336 aG~~~i~v~~~~~~~~~l--~-~ad~vi~~l~e~~~~~~~ 372 (378)
+|+.++. .+. ...+ . .++++++++.++...+..
T Consensus 182 aG~~~~~--~~~--~~~~~~~~~~~~~~~~~~el~~~l~~ 217 (236)
T 2fea_A 182 SDLCFAR--DYL--LNECREQNLNHLPYQDFYEIRKEIEN 217 (236)
T ss_dssp CSEEEEC--HHH--HHHHHHTTCCEECCSSHHHHHHHHHT
T ss_pred CCeeeec--hHH--HHHHHHCCCCeeecCCHHHHHHHHHH
Confidence 9998863 221 1112 2 278999999998665554
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=7.9e-19 Score=159.66 Aligned_cols=140 Identities=13% Similarity=0.123 Sum_probs=101.4
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCc------------hHHHHHHHHHhCccccchheeechhhHHHhhhhccc-
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSG------------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFV- 249 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~------------~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v- 249 (378)
.+++||+.++|+.|+++|++++|+||..... ...++..++.+|+. |+..+++.+... ..+
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~-----~~~~ 121 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQ-----GSVE 121 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTT-----CSSG
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCC-----Cccc
Confidence 3488999999999999999999999943000 25677888999987 554333321100 000
Q ss_pred -cccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHh
Q 017067 250 -LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS 328 (378)
Q Consensus 250 -~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~ 328 (378)
.++.+. .+||+|++ |+.+++++|++|++|+||||+.+
T Consensus 122 ~~~~~~~----------------------------~~KP~p~~--------------~~~~~~~lgi~~~~~~~VGD~~~ 159 (211)
T 2gmw_A 122 EFRQVCD----------------------------CRKPHPGM--------------LLSARDYLHIDMAASYMVGDKLE 159 (211)
T ss_dssp GGBSCCS----------------------------SSTTSCHH--------------HHHHHHHHTBCGGGCEEEESSHH
T ss_pred ccCccCc----------------------------CCCCCHHH--------------HHHHHHHcCCCHHHEEEEcCCHH
Confidence 001111 12666665 99999999999999999999999
Q ss_pred HHHHHHHcCCCE-EEEcCCCCCCCCC-CCCcEEecCCCcchHHHH
Q 017067 329 GVAGAQRIGMPC-VVMRSSLTSRAEF-PSANAVMDGFGGADLTIS 371 (378)
Q Consensus 329 Di~aA~~aG~~~-i~v~~~~~~~~~l-~~ad~vi~~l~e~~~~~~ 371 (378)
|+.+|+++||++ |+|.++....+.. ..+|++++++.|+...+.
T Consensus 160 Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l~ 204 (211)
T 2gmw_A 160 DMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAIK 204 (211)
T ss_dssp HHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHHH
T ss_pred HHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHHH
Confidence 999999999999 9999886543222 248999999999865444
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-18 Score=153.72 Aligned_cols=131 Identities=12% Similarity=0.144 Sum_probs=90.3
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.++.|++.++|+.|+++|++++++|| +....++..++.+++..+|...+...+. ...+...
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-------- 135 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSG---GFDIAVNKIKEKLGLDYAFANRLIVKDG--------KLTGDVE-------- 135 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEE---EEHHHHHHHHHHHTCSEEEEEEEEEETT--------EEEEEEE--------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcC---CcHHHHHHHHHHcCCCeEEEeeeEEECC--------EEcCCcc--------
Confidence 45789999999999999999999999 4456777888999987766543322210 0000000
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
..+.. ..+++.. +..+++++|++|++|++|||+.||+.||+.||+.++
T Consensus 136 --------------------------~~~~~--~~~K~~~---l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~- 183 (211)
T 1l7m_A 136 --------------------------GEVLK--ENAKGEI---LEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIA- 183 (211)
T ss_dssp --------------------------CSSCS--TTHHHHH---HHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE-
T ss_pred --------------------------cCccC--CccHHHH---HHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEE-
Confidence 00000 1112222 889999999999999999999999999999999754
Q ss_pred EcCCCCCCCCCCCCcEEecC--CCcch
Q 017067 343 MRSSLTSRAEFPSANAVMDG--FGGAD 367 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~vi~~--l~e~~ 367 (378)
+. + .......|++++++ +.++.
T Consensus 184 ~~-~--~~~~~~~a~~v~~~~~~~~l~ 207 (211)
T 1l7m_A 184 FC-A--KPILKEKADICIEKRDLREIL 207 (211)
T ss_dssp ES-C--CHHHHTTCSEEECSSCGGGGG
T ss_pred EC-C--CHHHHhhcceeecchhHHHHH
Confidence 33 1 11222458999988 87763
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2.3e-20 Score=172.45 Aligned_cols=126 Identities=17% Similarity=0.129 Sum_probs=88.8
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhH
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 264 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~ 264 (378)
++|++.++++.|+ +|+++ ++||... ......+..+++..+|+.. ..+...+.+.
T Consensus 123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~---~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~--------- 176 (259)
T 2ho4_A 123 HYQLLNQAFRLLL-DGAPL-IAIHKAR---YYKRKDGLALGPGPFVTAL------------EYATDTKAMV--------- 176 (259)
T ss_dssp BHHHHHHHHHHHH-TTCCE-EESCCCS---EEEETTEEEECSHHHHHHH------------HHHHTCCCEE---------
T ss_pred CHHHHHHHHHHHH-CCCEE-EEECCCC---cCcccCCcccCCcHHHHHH------------HHHhCCCceE---------
Confidence 6789999999999 89999 9999642 2222233445555555420 0001111111
Q ss_pred HHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEE
Q 017067 265 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVM 343 (378)
Q Consensus 265 ~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v 343 (378)
..||+|++ |+.+++++|++|++|++|||+. +|+.+|+++||++|+|
T Consensus 177 -------------------~~Kp~~~~--------------~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v 223 (259)
T 2ho4_A 177 -------------------VGKPEKTF--------------FLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILV 223 (259)
T ss_dssp -------------------CSTTSHHH--------------HHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred -------------------ecCCCHHH--------------HHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEE
Confidence 12555555 9999999999999999999998 9999999999999999
Q ss_pred cCCCCCCCC----CCCCcEEecCCCcchHH
Q 017067 344 RSSLTSRAE----FPSANAVMDGFGGADLT 369 (378)
Q Consensus 344 ~~~~~~~~~----l~~ad~vi~~l~e~~~~ 369 (378)
.++.....+ ...+|++++++.++...
T Consensus 224 ~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~ 253 (259)
T 2ho4_A 224 KTGKYKAADEEKINPPPYLTCESFPHAVDH 253 (259)
T ss_dssp SSTTCCTTGGGGSSSCCSEEESCHHHHHHH
T ss_pred CCCCCCcccccccCCCCCEEECCHHHHHHH
Confidence 988543222 24589999999998543
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-20 Score=168.84 Aligned_cols=183 Identities=13% Similarity=0.047 Sum_probs=125.9
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
++++|+|||||||+|+... +..+|++++.+++ . .+.+.+ . +.. ....+ ..+. .++
T Consensus 3 ~~k~viFDlDGTL~Ds~~~-~~~~~~~~~~~~~-~---~~~~~~---~----~~~--~~~~~-~~~~------~~~---- 57 (197)
T 1q92_A 3 RALRVLVDMDGVLADFEGG-FLRKFRARFPDQP-F---IALEDR---R----GFW--VSEQY-GRLR------PGL---- 57 (197)
T ss_dssp CCEEEEECSBTTTBCHHHH-HHHHHHHHCTTSC-C---CCGGGC---C----SSC--HHHHH-HHHS------TTH----
T ss_pred CceEEEEeCCCCCccCcHH-HHHHHHHHHhcCC-C---CCHHHh---c----CCc--HHHHH-HhcC------HHH----
Confidence 5689999999999999986 8889999888762 1 232221 1 111 11111 1111 111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHC-CCcEEEEeCCCCCchHHHHHHHHHhCccc-cchheeechhhH
Q 017067 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEV 240 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~-G~~v~ivTn~~~~~~~~~~~~l~~lgi~~-~f~~~iv~~~~~ 240 (378)
.+. ..+.|.+.......+++||+.++|+.|+++ |++++|+||+. ...+...++++|+.+ +|+.
T Consensus 58 ~~~----~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~---~~~~~~~l~~~~l~~~~f~~-------- 122 (197)
T 1q92_A 58 SEK----AISIWESKNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPI---KMFKYCPYEKYAWVEKYFGP-------- 122 (197)
T ss_dssp HHH----HHHHHTSTTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCC---SCCSSHHHHHHHHHHHHHCG--------
T ss_pred HHH----HHHHHHhhhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCc---cchHHHHHHHhchHHHhchH--------
Confidence 111 122332221123567999999999999999 99999999965 345566777777766 6631
Q ss_pred HHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcE
Q 017067 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (378)
Q Consensus 241 ~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~ 320 (378)
.+++++|++|++|
T Consensus 123 -------------------------------------------------------------------~~~~~l~~~~~~~ 135 (197)
T 1q92_A 123 -------------------------------------------------------------------DFLEQIVLTRDKT 135 (197)
T ss_dssp -------------------------------------------------------------------GGGGGEEECSCST
T ss_pred -------------------------------------------------------------------HHHHHhccCCccE
Confidence 1367889999999
Q ss_pred EEEeCCHhH----HHHHH-HcCCCEEEEcCCCCCCCCCCCCcEEecCCC-cchHHHHH
Q 017067 321 FLIAGSQSG----VAGAQ-RIGMPCVVMRSSLTSRAEFPSANAVMDGFG-GADLTISK 372 (378)
Q Consensus 321 i~VGDs~~D----i~aA~-~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~-e~~~~~~~ 372 (378)
++|||+..| +++|+ ++||++|++.++......++....+++++. ++...++.
T Consensus 136 ~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~l~~~l~~ 193 (197)
T 1q92_A 136 VVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAILDS 193 (197)
T ss_dssp TSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHHHHHT
T ss_pred EEECcccccCCchhhhcccCCCceEEEecCcccccccccccchhhhhHHHHHHHHhcc
Confidence 999999999 99999 999999999988766555544456899994 76655553
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-20 Score=166.29 Aligned_cols=177 Identities=14% Similarity=0.120 Sum_probs=120.5
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHH
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i 163 (378)
.++|+|||||||+|+... +..+|++++. |++. ++.+.+..+. .... ...+ ++
T Consensus 2 ~k~viFDlDGTL~Ds~~~-~~~~~~~~~~--g~~~--~~~~~~~~~~------~~~~----~~~~-~~------------ 53 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAG-LLRGFRRRFP--EEPH--VPLEQRRGFL------AREQ----YRAL-RP------------ 53 (193)
T ss_dssp CEEEEECSBTTTBCHHHH-HHHHHHHHST--TSCC--CCGGGCCSSC------HHHH----HHHH-CT------------
T ss_pred CcEEEEECCCcCccchhH-HHHHHHHHhc--CCCC--CCHHHHHHhh------HHHH----HHHH-hH------------
Confidence 479999999999999986 7788888876 6641 3333221111 0011 1111 11
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHC-CCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 164 ~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~-G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
...+.+.+.|.+.......+++||+.++|+.|+++ |++++|+||+. ...++.+++.+|+ |+.. ++
T Consensus 54 -~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~---~~~~~~~l~~~gl---f~~i-~~------ 119 (193)
T 2i7d_A 54 -DLADKVASVYEAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPL---LKYHHCVGEKYRW---VEQH-LG------ 119 (193)
T ss_dssp -THHHHHHHHHTSTTTTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCC---SSCTTTHHHHHHH---HHHH-HC------
T ss_pred -HHHHHHHHHHHhcCccccCccCcCHHHHHHHHHhCCCCeEEEEeCCC---hhhHHHHHHHhCc---hhhh-cC------
Confidence 11223333333321123567999999999999999 99999999954 4566677888777 5431 11
Q ss_pred hhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017067 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (378)
Q Consensus 243 ~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~ 322 (378)
..+++++|++|++|++
T Consensus 120 ----------------------------------------------------------------~~~~~~~~~~~~~~~~ 135 (193)
T 2i7d_A 120 ----------------------------------------------------------------PQFVERIILTRDKTVV 135 (193)
T ss_dssp ----------------------------------------------------------------HHHHTTEEECSCGGGB
T ss_pred ----------------------------------------------------------------HHHHHHcCCCcccEEE
Confidence 1147889999999999
Q ss_pred EeCCHhH----HHHHH-HcCCCEEEEcCCCCCCCCCCCCcEEecCCCcc
Q 017067 323 IAGSQSG----VAGAQ-RIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 323 VGDs~~D----i~aA~-~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~ 366 (378)
|||+.+| +.+|+ ++||++|++.++......+.....+++++.+.
T Consensus 136 vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~ 184 (193)
T 2i7d_A 136 LGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRRRLLSWSDN 184 (193)
T ss_dssp CCSEEEESSSCCCSSCSSCSSEEEEECCGGGTTCCCCTTSCEECSTTSC
T ss_pred ECCchhhCcHHHhhcccccccceEEEEeccCcccccccchHHHhhHHHH
Confidence 9999999 99999 99999999988766554444344579999553
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-19 Score=157.53 Aligned_cols=122 Identities=11% Similarity=0.155 Sum_probs=89.0
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
..++||+.++|+.|+++|++++|+||.. ...++.+ +.+|+..+++.. +..+... .+
T Consensus 78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~---~~~~~~~-~~~~~~~~~~~~-~~~~~~~--------------~~----- 133 (201)
T 4ap9_A 78 VNVSPEARELVETLREKGFKVVLISGSF---EEVLEPF-KELGDEFMANRA-IFEDGKF--------------QG----- 133 (201)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEEE---TTTSGGG-TTTSSEEEEEEE-EEETTEE--------------EE-----
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEeCCc---HHHHHHH-HHcCchhheeeE-EeeCCce--------------EC-----
Confidence 5799999999999999999999999943 4666677 888888774442 2221110 00
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
.+|.+.. ...+++++ +|++|++|||+.+|+.+|+.+|+. ++
T Consensus 134 ----------------------~~~~~~~--------------k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~-v~ 174 (201)
T 4ap9_A 134 ----------------------IRLRFRD--------------KGEFLKRF--RDGFILAMGDGYADAKMFERADMG-IA 174 (201)
T ss_dssp ----------------------EECCSSC--------------HHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEE-EE
T ss_pred ----------------------CcCCccC--------------HHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCce-EE
Confidence 0222222 45567777 899999999999999999999997 44
Q ss_pred EcCCCCCCCCCCCCcEEecCCCcchHHHHHH
Q 017067 343 MRSSLTSRAEFPSANAVMDGFGGADLTISKL 373 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l 373 (378)
+.++.. .||++++++.|+...+.+|
T Consensus 175 ~~~~~~------~ad~v~~~~~el~~~l~~l 199 (201)
T 4ap9_A 175 VGREIP------GADLLVKDLKELVDFIKNL 199 (201)
T ss_dssp ESSCCT------TCSEEESSHHHHHHHHHTC
T ss_pred ECCCCc------cccEEEccHHHHHHHHHHh
Confidence 444422 7899999999987666654
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-18 Score=167.88 Aligned_cols=203 Identities=13% Similarity=0.130 Sum_probs=124.9
Q ss_pred CCCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhH
Q 017067 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~ 160 (378)
....++|+||+||||++.+. +...+...|+. .....+..........+...+..++......+.+.
T Consensus 104 i~~~~~viFD~DgTLi~~~~------~~~~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 169 (335)
T 3n28_A 104 LTKPGLIVLDMDSTAIQIEC------IDEIAKLAGVG------EEVAEVTERAMQGELDFEQSLRLRVSKLKDAPEQI-- 169 (335)
T ss_dssp TTSCCEEEECSSCHHHHHHH------HHHHHHHHTCH------HHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBTTH--
T ss_pred ccCCCEEEEcCCCCCcChHH------HHHHHHHcCCc------hHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCHHH--
Confidence 34568999999999999543 35556666664 22222222111112222223333332222221110
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhH
Q 017067 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (378)
Q Consensus 161 ~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~ 240 (378)
+.... ..++++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|...+...+.
T Consensus 170 -------------~~~~~--~~~~~~pg~~~~l~~L~~~g~~~~ivS~---~~~~~~~~~~~~lgl~~~~~~~l~~~d~- 230 (335)
T 3n28_A 170 -------------LSQVR--ETLPLMPELPELVATLHAFGWKVAIASG---GFTYFSDYLKEQLSLDYAQSNTLEIVSG- 230 (335)
T ss_dssp -------------HHHHH--TTCCCCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHTCSEEEEEEEEEETT-
T ss_pred -------------HHHHH--HhCCcCcCHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHcCCCeEEeeeeEeeCC-
Confidence 11111 2367999999999999999999999999 5578899999999999888753211110
Q ss_pred HHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcE
Q 017067 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (378)
Q Consensus 241 ~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~ 320 (378)
.+...+.++.. ..||.|.+ |+.+++++|++|++|
T Consensus 231 ---~~tg~~~~~~~-----------------------------~~kpk~~~--------------~~~~~~~lgi~~~~~ 264 (335)
T 3n28_A 231 ---KLTGQVLGEVV-----------------------------SAQTKADI--------------LLTLAQQYDVEIHNT 264 (335)
T ss_dssp ---EEEEEEESCCC-----------------------------CHHHHHHH--------------HHHHHHHHTCCGGGE
T ss_pred ---eeeeeeccccc-----------------------------ChhhhHHH--------------HHHHHHHcCCChhhE
Confidence 11111111100 01333333 999999999999999
Q ss_pred EEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 321 FLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
++|||+.||+.|++++|+.+++ ++ .......|++++ ...++.
T Consensus 265 v~vGDs~nDi~~a~~aG~~va~--~~--~~~~~~~a~~v~-~~~~l~ 306 (335)
T 3n28_A 265 VAVGDGANDLVMMAAAGLGVAY--HA--KPKVEAKAQTAV-RFAGLG 306 (335)
T ss_dssp EEEECSGGGHHHHHHSSEEEEE--SC--CHHHHTTSSEEE-SSSCTH
T ss_pred EEEeCCHHHHHHHHHCCCeEEe--CC--CHHHHhhCCEEE-ecCCHH
Confidence 9999999999999999998777 22 122233477776 444443
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1e-17 Score=149.06 Aligned_cols=102 Identities=11% Similarity=0.193 Sum_probs=86.1
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCc-hHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~-~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
.+++||+.++|+.|+++|++++|+|| +. ...++.+++.+|+..+|+..++..
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~---~~~~~~~~~~l~~~gl~~~f~~~~~~~------------------------ 119 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASR---TSEIEGANQLLELFDLFRYFVHREIYP------------------------ 119 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEEC---CSCHHHHHHHHHHTTCTTTEEEEEESS------------------------
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeC---CCChHHHHHHHHHcCcHhhcceeEEEe------------------------
Confidence 56899999999999999999999999 44 478889999999999988642211
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
+|.| .. |..+++++|++|++|++|||+.+|+++|+++||++|
T Consensus 120 ------------------------~~k~-----------~~---~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 120 ------------------------GSKI-----------TH---FERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp ------------------------SCHH-----------HH---HHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred ------------------------CchH-----------HH---HHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 1111 12 899999999999999999999999999999999999
Q ss_pred EEcCCCCC
Q 017067 342 VMRSSLTS 349 (378)
Q Consensus 342 ~v~~~~~~ 349 (378)
++.++...
T Consensus 162 ~v~~g~~~ 169 (187)
T 2wm8_A 162 HIQNGMNL 169 (187)
T ss_dssp ECSSSCCH
T ss_pred EECCCCCh
Confidence 99988543
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-17 Score=157.12 Aligned_cols=113 Identities=12% Similarity=0.158 Sum_probs=90.1
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+..+
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~f~~i~---------------------------- 210 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVIAEVL---------------------------- 210 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEECSCC----------------------------
T ss_pred cccchhHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhCCceeeeecC----------------------------
Confidence 57999999999999999999999999 44688899999999998886521
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
|.+ ...+++++++. ++|++|||+.+|+.+|+++|+. |.
T Consensus 211 -------------------------------~~~---------K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~-v~ 248 (287)
T 3a1c_A 211 -------------------------------PHQ---------KSEEVKKLQAK-EVVAFVGDGINDAPALAQADLG-IA 248 (287)
T ss_dssp -------------------------------TTC---------HHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEE-EE
T ss_pred -------------------------------hHH---------HHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCee-EE
Confidence 111 35568899999 9999999999999999999997 44
Q ss_pred EcCCCCCCCCCCCCcEEe--cCCCcchHHH
Q 017067 343 MRSSLTSRAEFPSANAVM--DGFGGADLTI 370 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~vi--~~l~e~~~~~ 370 (378)
+..+ .......+|+++ +++.++...+
T Consensus 249 ~~~~--~~~~~~~ad~v~~~~~~~~l~~~l 276 (287)
T 3a1c_A 249 VGSG--SDVAVESGDIVLIRDDLRDVVAAI 276 (287)
T ss_dssp ECCC--SCCSSCCSSEEESSSCTHHHHHHH
T ss_pred eCCC--CHHHHhhCCEEEeCCCHHHHHHHH
Confidence 4332 233345689999 8888875443
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2e-17 Score=154.19 Aligned_cols=113 Identities=14% Similarity=0.206 Sum_probs=87.9
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
+++||+.++|+.|+++|++++|+|| .....++.+++.+|+.++|+. +++.+....
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~---~~~~~~~~~~~~~gl~~~f~~-~~~~~k~~~--------------------- 198 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTG---DNRFVAKWVAEELGLDDYFAE-VLPHEKAEK--------------------- 198 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEECS-CCGGGHHHH---------------------
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCChhHhHh-cCHHHHHHH---------------------
Confidence 6899999999999999999999999 457889999999999999887 333322211
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
.||.|+. | +|++|||+.||+.|++.||+ .+
T Consensus 199 ---------------------~k~~~~~--------------~------------~~~~vGD~~nDi~~~~~Ag~---~v 228 (280)
T 3skx_A 199 ---------------------VKEVQQK--------------Y------------VTAMVGDGVNDAPALAQADV---GI 228 (280)
T ss_dssp ---------------------HHHHHTT--------------S------------CEEEEECTTTTHHHHHHSSE---EE
T ss_pred ---------------------HHHHHhc--------------C------------CEEEEeCCchhHHHHHhCCc---eE
Confidence 2444443 3 79999999999999999995 55
Q ss_pred cCCCCCCCCCCCCcEEe--cCCCcchHHHH
Q 017067 344 RSSLTSRAEFPSANAVM--DGFGGADLTIS 371 (378)
Q Consensus 344 ~~~~~~~~~l~~ad~vi--~~l~e~~~~~~ 371 (378)
..++........|++++ +++.++...+.
T Consensus 229 a~~~~~~~~~~~a~~~~~~~~~~~l~~~l~ 258 (280)
T 3skx_A 229 AIGAGTDVAVETADIVLVRNDPRDVAAIVE 258 (280)
T ss_dssp ECSCCSSSCCCSSSEECSSCCTHHHHHHHH
T ss_pred EecCCcHHHHhhCCEEEeCCCHHHHHHHHH
Confidence 55655556666788888 88888766554
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=4.2e-18 Score=159.05 Aligned_cols=63 Identities=11% Similarity=0.180 Sum_probs=55.5
Q ss_pred HHHHHHHcCCCCCcEEEEeCC-HhHHHHHHHcCCCEEEEcCCCCCCCCC----CCCcEEecCCCcchH
Q 017067 306 LRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSSLTSRAEF----PSANAVMDGFGGADL 368 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~~~l----~~ad~vi~~l~e~~~ 368 (378)
|+.+++++|++|++|++|||+ .||+.||+.+|+.+++|.++.....++ ..+|++++++.|+..
T Consensus 201 ~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~ 268 (271)
T 1vjr_A 201 VDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAK 268 (271)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHH
T ss_pred HHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHH
Confidence 999999999999999999999 599999999999999999987654443 268999999988754
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-17 Score=144.52 Aligned_cols=118 Identities=14% Similarity=0.070 Sum_probs=90.7
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHH
Q 017067 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 265 (378)
Q Consensus 186 ~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~ 265 (378)
.|++.++|+.|+++|++++|+||. ....++.+++.+|+..+|+.
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~---~~~~~~~~l~~~gl~~~~~~--------------------------------- 81 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGR---DSAPLITRLKELGVEEIYTG--------------------------------- 81 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESC---CCHHHHHHHHHTTCCEEEEC---------------------------------
T ss_pred cccHHHHHHHHHHCCCEEEEEeCC---CcHHHHHHHHHcCCHhhccC---------------------------------
Confidence 345578999999999999999994 46889999999999887643
Q ss_pred HHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcC
Q 017067 266 ARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (378)
Q Consensus 266 ~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (378)
.||.|.+ |+.+++++|++|++|++|||+.+|+.+|+.+|+.+++. +
T Consensus 82 -------------------~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~ 127 (162)
T 2p9j_A 82 -------------------SYKKLEI--------------YEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-N 127 (162)
T ss_dssp -------------------C--CHHH--------------HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-T
T ss_pred -------------------CCCCHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-C
Confidence 0444444 89999999999999999999999999999999987654 2
Q ss_pred CCCCCCCCCCCcEEecCCCcch---HHHHHHhh
Q 017067 346 SLTSRAEFPSANAVMDGFGGAD---LTISKLRH 375 (378)
Q Consensus 346 ~~~~~~~l~~ad~vi~~l~e~~---~~~~~l~~ 375 (378)
+ .......|+++++++.+-. ..+..++.
T Consensus 128 ~--~~~~~~~a~~v~~~~~~~g~~~~~~~~~~~ 158 (162)
T 2p9j_A 128 A--VEEVRKVAVYITQRNGGEGALREVAELIHF 158 (162)
T ss_dssp S--CHHHHHHCSEECSSCSSSSHHHHHHHHHHH
T ss_pred c--cHHHHhhCCEEecCCCCCcHHHHHHHHHHH
Confidence 2 1122234899999999843 33455443
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-17 Score=154.53 Aligned_cols=67 Identities=19% Similarity=0.266 Sum_probs=56.5
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCC-CCCC---CCCcEEecCCCcchHHHHH
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTS-RAEF---PSANAVMDGFGGADLTISK 372 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~-~~~l---~~ad~vi~~l~e~~~~~~~ 372 (378)
|+.+++++|++|++|++|||+. ||+.||+.+|+.+++|.++... .... ..+|++++++.|+...+..
T Consensus 196 ~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 267 (271)
T 2x4d_A 196 FKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQ 267 (271)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHHHH
T ss_pred HHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHHHh
Confidence 9999999999999999999998 9999999999999999988443 2222 3489999999998654443
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.68 E-value=2.8e-17 Score=150.12 Aligned_cols=103 Identities=10% Similarity=0.051 Sum_probs=75.3
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhH
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 264 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~ 264 (378)
+.||+.++|+.|+++|++++|+||+.. .....+++. +.++|+..+.+.+. +..+
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~---~~~~~~l~~--l~~~f~~i~~~~~~--------------~~~~------- 142 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSP---TKTETVSKT--LADNFHIPATNMNP--------------VIFA------- 142 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCC---CSSCCHHHH--HHHHTTCCTTTBCC--------------CEEC-------
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcH---HHHHHHHHH--HHHhcCccccccch--------------hhhc-------
Confidence 578999999999999999999999642 333334443 44555542111100 0000
Q ss_pred HHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEc
Q 017067 265 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (378)
Q Consensus 265 ~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~ 344 (378)
..||+|++ |..+++++|+ |+||||+.+|+++|+++||++|++.
T Consensus 143 -------------------~~KP~p~~--------------~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 143 -------------------GDKPGQNT--------------KSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp -------------------CCCTTCCC--------------SHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred -------------------CCCCCHHH--------------HHHHHHHCCC----EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 12888777 8999999998 9999999999999999999999999
Q ss_pred CCCCCC
Q 017067 345 SSLTSR 350 (378)
Q Consensus 345 ~~~~~~ 350 (378)
++....
T Consensus 186 ~g~~~~ 191 (211)
T 2b82_A 186 RASNST 191 (211)
T ss_dssp CCTTCS
T ss_pred cCCCCc
Confidence 876543
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.9e-18 Score=161.07 Aligned_cols=119 Identities=11% Similarity=0.167 Sum_probs=87.6
Q ss_pred CCHHHHHHHHHHCCCcEEEEeCCCCCchHHH--H--HHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIA--R--SVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 187 pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~--~--~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
+...++++.|+++|++ +|+||... ... . .+++..++..+|+. +++.++ +.
T Consensus 148 ~~~~~l~~~L~~~g~~-~i~tn~~~---~~~~~~~~~~~~~~~l~~~f~~-~~~~~~--------------~~------- 201 (284)
T 2hx1_A 148 HDLNKTVNLLRKRTIP-AIVANTDN---TYPLTKTDVAIAIGGVATMIES-ILGRRF--------------IR------- 201 (284)
T ss_dssp HHHHHHHHHHHHCCCC-EEEECCCS---EEECSSSCEEECHHHHHHHHHH-HHCSCE--------------EE-------
T ss_pred ccHHHHHHHHhcCCCe-EEEECCCc---cccCcCCCccccCChHHHHHHH-HhCCce--------------eE-------
Confidence 3777888899999999 99999653 211 1 11233445555554 222211 11
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHc----CCCCCcEEEEeCCH-hHHHHHHHcC
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA----EKPVRNCFLIAGSQ-SGVAGAQRIG 337 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~l----gv~p~~~i~VGDs~-~Di~aA~~aG 337 (378)
..||+|++ |+.+++++ |++|++|+||||+. +||.+|+++|
T Consensus 202 ---------------------~~KP~p~~--------------~~~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~aG 246 (284)
T 2hx1_A 202 ---------------------FGKPDSQM--------------FMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFG 246 (284)
T ss_dssp ---------------------ESTTSSHH--------------HHHHHHHHHTTSCCCGGGEEEEESCTTTHHHHHHHHT
T ss_pred ---------------------ecCCCHHH--------------HHHHHHHHhhccCCCcceEEEECCCcHHHHHHHHHcC
Confidence 12777666 99999999 99999999999995 9999999999
Q ss_pred CCEEEEcCCCCCCCCCC--------CCcEEecCCCcc
Q 017067 338 MPCVVMRSSLTSRAEFP--------SANAVMDGFGGA 366 (378)
Q Consensus 338 ~~~i~v~~~~~~~~~l~--------~ad~vi~~l~e~ 366 (378)
|++|+|.++.....++. .+|++++++.|+
T Consensus 247 ~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 247 LDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp CEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred CeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 99999999877655543 589999999986
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.66 E-value=9.1e-16 Score=143.06 Aligned_cols=63 Identities=14% Similarity=0.270 Sum_probs=57.9
Q ss_pred HHHHHHHcCCCCCcEEEEeCC-HhHHHHHHHcCCCEEEEcCCCCCCCCCC--------CCcEEecCCCcchH
Q 017067 306 LRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSSLTSRAEFP--------SANAVMDGFGGADL 368 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~~~l~--------~ad~vi~~l~e~~~ 368 (378)
|+.+++++|++|++|++|||+ .+|+.+|+++|+++++|.++.....++. .+|++++++.|+..
T Consensus 193 ~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el~~ 264 (268)
T 3qgm_A 193 MREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDMVE 264 (268)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHHHH
T ss_pred HHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHHHH
Confidence 999999999999999999999 5999999999999999999988777665 68999999998754
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2.7e-17 Score=142.77 Aligned_cols=113 Identities=17% Similarity=0.078 Sum_probs=87.8
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhh
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~ 271 (378)
+|+.|+++|++++|+||. ....++.+++.+|+..+|...
T Consensus 39 ~l~~l~~~g~~~~i~T~~---~~~~~~~~~~~~gl~~~~~~~-------------------------------------- 77 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGE---KTEIVRRRAEKLKVDYLFQGV-------------------------------------- 77 (164)
T ss_dssp HHHHHHHTTCCEEEECSS---CCHHHHHHHHHTTCSEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCC---ChHHHHHHHHHcCCCEeeccc--------------------------------------
Confidence 789999999999999994 468899999999999887541
Q ss_pred HHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC
Q 017067 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA 351 (378)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 351 (378)
||.|.+ |+.+++++|++|++|+||||+.+|+.+|+++|+.+++.+ ....
T Consensus 78 --------------kpk~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~---~~~~ 126 (164)
T 3e8m_A 78 --------------VDKLSA--------------AEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPAS---APFY 126 (164)
T ss_dssp --------------SCHHHH--------------HHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTT---SCHH
T ss_pred --------------CChHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCC---hHHH
Confidence 444444 999999999999999999999999999999998766533 2223
Q ss_pred CCCCCcEEecCCCc---chHHHHHHhhc
Q 017067 352 EFPSANAVMDGFGG---ADLTISKLRHS 376 (378)
Q Consensus 352 ~l~~ad~vi~~l~e---~~~~~~~l~~~ 376 (378)
....||+++.+..+ +...++.+++.
T Consensus 127 ~~~~ad~v~~~~~~~g~~~e~~~~ll~~ 154 (164)
T 3e8m_A 127 IRRLSTIFLEKRGGEGVFREFVEKVLGI 154 (164)
T ss_dssp HHTTCSSCCCCCTTTTHHHHHHHHHTTC
T ss_pred HHHhCcEEeccCCCCcHHHHHHHHHHcc
Confidence 33458999887553 33445555533
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.65 E-value=5.3e-17 Score=148.53 Aligned_cols=104 Identities=12% Similarity=0.081 Sum_probs=83.6
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhh
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~ 271 (378)
+|+.|+++|++++|+||. ....++.+++.+|+..+|...
T Consensus 84 ~L~~L~~~G~~l~I~T~~---~~~~~~~~l~~lgi~~~f~~~-------------------------------------- 122 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGR---RAKLLEDRANTLGITHLYQGQ-------------------------------------- 122 (211)
T ss_dssp HHHHHHHTTCEEEEECSS---CCHHHHHHHHHHTCCEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCC---CHHHHHHHHHHcCCchhhccc--------------------------------------
Confidence 899999999999999994 468899999999999887641
Q ss_pred HHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC
Q 017067 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA 351 (378)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 351 (378)
||.|++ ++.+++++|++|++|++|||+.+|+.+++++|+.++... ....
T Consensus 123 --------------k~K~~~--------------l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~---~~~~ 171 (211)
T 3ij5_A 123 --------------SDKLVA--------------YHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVAD---AHPL 171 (211)
T ss_dssp --------------SSHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTT---SCTT
T ss_pred --------------CChHHH--------------HHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCC---ccHH
Confidence 222222 899999999999999999999999999999998765432 2233
Q ss_pred CCCCCcEEecCCCcch
Q 017067 352 EFPSANAVMDGFGGAD 367 (378)
Q Consensus 352 ~l~~ad~vi~~l~e~~ 367 (378)
....||+|+.+.++.+
T Consensus 172 ~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 172 LLPKAHYVTRIKGGRG 187 (211)
T ss_dssp TGGGSSEECSSCTTTT
T ss_pred HHhhCCEEEeCCCCCc
Confidence 3456899999986543
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-15 Score=142.47 Aligned_cols=62 Identities=10% Similarity=0.232 Sum_probs=56.8
Q ss_pred HHHHHHHcCCCCCcEEEEeCC-HhHHHHHHHcCCCEEEEcCCCCCCCCCC----CCcEEecCCCcch
Q 017067 306 LRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSSLTSRAEFP----SANAVMDGFGGAD 367 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~~~l~----~ad~vi~~l~e~~ 367 (378)
|+.+++++|++|++|++|||+ .+||.+|+++|+++|+|.++.....++. .+|++++++.|+.
T Consensus 188 ~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l~ 254 (264)
T 3epr_A 188 MNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWT 254 (264)
T ss_dssp HHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGCC
T ss_pred HHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHh
Confidence 999999999999999999999 6999999999999999999987776665 5899999999873
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.63 E-value=7.9e-17 Score=150.70 Aligned_cols=62 Identities=13% Similarity=0.182 Sum_probs=53.7
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCC----CCcEEecCCCcchHH
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFP----SANAVMDGFGGADLT 369 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~----~ad~vi~~l~e~~~~ 369 (378)
|+.++++ ++|++|+||||+. +||.+|+++||.+|+|.++.....++. .+|++++++.|+...
T Consensus 193 ~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~ 259 (263)
T 1zjj_A 193 YEVVREM--FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDY 259 (263)
T ss_dssp HHHHHHH--STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGG
T ss_pred HHHHHHh--CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHH
Confidence 8999999 9999999999995 999999999999999998876544433 589999999998643
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=5.7e-17 Score=155.13 Aligned_cols=63 Identities=10% Similarity=0.099 Sum_probs=55.6
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCC----------CCCcEEecCCCcchH
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEF----------PSANAVMDGFGGADL 368 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l----------~~ad~vi~~l~e~~~ 368 (378)
|+.+++++|++|++|++|||+. +||.+|+++|+.+++|.++.....++ ..+|++++++.|+..
T Consensus 221 ~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~ 294 (306)
T 2oyc_A 221 FECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTE 294 (306)
T ss_dssp HHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGG
T ss_pred HHHHHHHcCCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHH
Confidence 9999999999999999999996 99999999999999999987654332 258999999999854
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-16 Score=144.70 Aligned_cols=141 Identities=15% Similarity=0.167 Sum_probs=102.3
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCch---------------HHHHHHHHHhCccccchheeechhhHHHhhhhc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGD---------------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQ 247 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~---------------~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~ 247 (378)
..++||+.++|+.|+++|++++|+||. .. ..+...++.+|+. |+..+++..... +.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~---~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~----g~ 125 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQ---SGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEA----GV 125 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEEC---HHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTT----CC
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCc---CCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCC----Cc
Confidence 358999999999999999999999994 34 5677888888875 332111110000 00
Q ss_pred ccc-ccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 017067 248 FVL-GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 326 (378)
Q Consensus 248 ~v~-g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs 326 (378)
++. .+.+ ..+||+|++ |+.+++++|++|++|+||||+
T Consensus 126 ~~~~~~~~----------------------------~~~KP~~~~--------------~~~~~~~~~i~~~~~~~VGD~ 163 (218)
T 2o2x_A 126 GPLAIPDH----------------------------PMRKPNPGM--------------LVEAGKRLALDLQRSLIVGDK 163 (218)
T ss_dssp STTCCSSC----------------------------TTSTTSCHH--------------HHHHHHHHTCCGGGCEEEESS
T ss_pred eeecccCC----------------------------ccCCCCHHH--------------HHHHHHHcCCCHHHEEEEeCC
Confidence 000 0000 023666666 999999999999999999999
Q ss_pred HhHHHHHHHcCCCE-EEEcCCCCCCCCC-CCCcEEecCCCcchHHHHHHh
Q 017067 327 QSGVAGAQRIGMPC-VVMRSSLTSRAEF-PSANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 327 ~~Di~aA~~aG~~~-i~v~~~~~~~~~l-~~ad~vi~~l~e~~~~~~~l~ 374 (378)
.+||.+|+++||++ |+|.++....... ..++++++++.++...+..|.
T Consensus 164 ~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~l~~~~ 213 (218)
T 2o2x_A 164 LADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAIETLG 213 (218)
T ss_dssp HHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHHHHHHh
Confidence 99999999999999 9999887654333 247899999999877676654
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.62 E-value=4.6e-17 Score=144.15 Aligned_cols=101 Identities=14% Similarity=0.127 Sum_probs=78.6
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhh
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~ 271 (378)
+|+.|+++|++++|+||. ....++.+++.+|+. +|...
T Consensus 47 ~l~~L~~~g~~~~i~T~~---~~~~~~~~~~~lgi~-~~~~~-------------------------------------- 84 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTE---QNPVVAARARKLKIP-VLHGI-------------------------------------- 84 (176)
T ss_dssp HHHHHHHTTCEEEEEESS---CCHHHHHHHHHHTCC-EEESC--------------------------------------
T ss_pred HHHHHHHCCCeEEEEECc---ChHHHHHHHHHcCCe-eEeCC--------------------------------------
Confidence 899999999999999994 468899999999998 44320
Q ss_pred HHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC
Q 017067 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA 351 (378)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 351 (378)
||.|++ ++.+++++|++|++|++|||+.+|+.+++.+|+.+++.+ ....
T Consensus 85 --------------~~k~~~--------------l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~---~~~~ 133 (176)
T 3mmz_A 85 --------------DRKDLA--------------LKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVAS---AHDV 133 (176)
T ss_dssp --------------SCHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT---CCHH
T ss_pred --------------CChHHH--------------HHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCC---hhHH
Confidence 222222 899999999999999999999999999999997654422 2222
Q ss_pred CCCCCcEEecCCCc
Q 017067 352 EFPSANAVMDGFGG 365 (378)
Q Consensus 352 ~l~~ad~vi~~l~e 365 (378)
....||+++.+-.+
T Consensus 134 ~~~~ad~v~~~~~~ 147 (176)
T 3mmz_A 134 VRGAARAVTTVPGG 147 (176)
T ss_dssp HHHHSSEECSSCTT
T ss_pred HHHhCCEEecCCCC
Confidence 23458999988443
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.61 E-value=2.5e-16 Score=140.95 Aligned_cols=102 Identities=12% Similarity=0.146 Sum_probs=81.1
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhh
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~ 271 (378)
+|+.|+++|++++|+||. ....++.+++.+|+.++|+..
T Consensus 54 ~l~~L~~~g~~~~i~T~~---~~~~~~~~~~~lgl~~~f~~~-------------------------------------- 92 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGR---KTAIVERRAKSLGIEHLFQGR-------------------------------------- 92 (189)
T ss_dssp HHHHHHHTTCEEEEECSS---CCHHHHHHHHHHTCSEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEECc---ChHHHHHHHHHcCCHHHhcCc--------------------------------------
Confidence 889999999999999994 468899999999999888651
Q ss_pred HHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC
Q 017067 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA 351 (378)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 351 (378)
+ +|| +. ++.+++++|++|++|++|||+.+|+.+++++|+.+++. + ....
T Consensus 93 --------------~---------~K~--~~---~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~--~~~~ 141 (189)
T 3mn1_A 93 --------------E---------DKL--VV---LDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-N--AASF 141 (189)
T ss_dssp --------------S---------CHH--HH---HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-T--SCHH
T ss_pred --------------C---------ChH--HH---HHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeC-C--ccHH
Confidence 0 111 22 89999999999999999999999999999999865432 2 2223
Q ss_pred CCCCCcEEecCCCc
Q 017067 352 EFPSANAVMDGFGG 365 (378)
Q Consensus 352 ~l~~ad~vi~~l~e 365 (378)
....||+|+.+.++
T Consensus 142 ~~~~ad~v~~~~~~ 155 (189)
T 3mn1_A 142 VREHAHGITRAQGG 155 (189)
T ss_dssp HHHTSSEECSSCTT
T ss_pred HHHhCCEEecCCCC
Confidence 33458999998644
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.5e-15 Score=132.37 Aligned_cols=172 Identities=12% Similarity=0.073 Sum_probs=104.4
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHH
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i 163 (378)
.++|+|||||||+|++.. +..++++ .+|.+ ++.+.+ .+. + .... ++.. .+
T Consensus 4 ~~~viFD~DGtL~Ds~~~-~~~~~~~---~~g~~---~~~~~~---~g~--~-~~~~-------~~~~----~~------ 53 (180)
T 3bwv_A 4 RQRIAIDMDEVLADTLGA-VVKAVNE---RADLN---IKMESL---NGK--K-LKHM-------IPEH----EG------ 53 (180)
T ss_dssp CCEEEEETBTTTBCHHHH-HHHHHHH---HSCCC---CCGGGC---TTC--C-C-------------------C------
T ss_pred ccEEEEeCCCcccccHHH-HHHHHHH---HhCCC---CCHHHH---cCc--c-HHHH-------CCch----HH------
Confidence 589999999999999986 6666665 56765 333221 110 1 0100 1100 00
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCch--HHHHHHHHH-hCccccchheeechhhH
Q 017067 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGD--RIARSVVEK-LGSERISKIKIVGNEEV 240 (378)
Q Consensus 164 ~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~--~~~~~~l~~-lgi~~~f~~~iv~~~~~ 240 (378)
.+.+.. +...+ ....+++||+.++|+.|+++ ++++|+||+..... ......++. ++...+++. ++++++.
T Consensus 54 -~~~~~~---~~~~~-~~~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~-i~~~~~~ 126 (180)
T 3bwv_A 54 -LVMDIL---KEPGF-FRNLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHF-VFCGRKN 126 (180)
T ss_dssp -HHHHHH---HSTTG-GGSCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGE-EECSCGG
T ss_pred -HHHHHH---hCcch-hccCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccE-EEeCCcC
Confidence 111111 11112 22467999999999999985 99999999621021 222444544 455555554 3333110
Q ss_pred HHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcE
Q 017067 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (378)
Q Consensus 241 ~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~ 320 (378)
.+ ++|
T Consensus 127 -----------------------------------------------------------------------~l----~~~ 131 (180)
T 3bwv_A 127 -----------------------------------------------------------------------II----LAD 131 (180)
T ss_dssp -----------------------------------------------------------------------GB----CCS
T ss_pred -----------------------------------------------------------------------ee----ccc
Confidence 11 779
Q ss_pred EEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHH
Q 017067 321 FLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKL 373 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l 373 (378)
++|||+.+|++ .++| ++|++.++.... ..++++++++.|+...+..+
T Consensus 132 l~ieDs~~~i~--~aaG-~~i~~~~~~~~~---~~~~~~i~~~~el~~~l~~~ 178 (180)
T 3bwv_A 132 YLIDDNPKQLE--IFEG-KSIMFTASHNVY---EHRFERVSGWRDVKNYFNSI 178 (180)
T ss_dssp EEEESCHHHHH--HCSS-EEEEECCGGGTT---CCSSEEECSHHHHHHHHHHH
T ss_pred EEecCCcchHH--HhCC-CeEEeCCCcccC---CCCceecCCHHHHHHHHHHh
Confidence 99999999995 5689 999998775422 46889999999987666554
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=5.7e-16 Score=137.25 Aligned_cols=108 Identities=14% Similarity=0.046 Sum_probs=85.5
Q ss_pred HHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHH
Q 017067 189 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARK 268 (378)
Q Consensus 189 v~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~k 268 (378)
..++|+.|+++|++++++||. ....+..+++.+|+..+|+..
T Consensus 40 ~~~~l~~L~~~G~~~~i~Tg~---~~~~~~~~~~~lgl~~~~~~~----------------------------------- 81 (180)
T 1k1e_A 40 DGLGIKMLMDADIQVAVLSGR---DSPILRRRIADLGIKLFFLGK----------------------------------- 81 (180)
T ss_dssp HHHHHHHHHHTTCEEEEEESC---CCHHHHHHHHHHTCCEEEESC-----------------------------------
T ss_pred hHHHHHHHHHCCCeEEEEeCC---CcHHHHHHHHHcCCceeecCC-----------------------------------
Confidence 347899999999999999994 468889999999998876431
Q ss_pred HhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCC
Q 017067 269 AVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLT 348 (378)
Q Consensus 269 a~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~ 348 (378)
||.|.+ |+.+++++|++|++|++|||+.+|+.+++.+|+.+++.+ +
T Consensus 82 -----------------k~k~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~-~-- 127 (180)
T 1k1e_A 82 -----------------LEKETA--------------CFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVAD-A-- 127 (180)
T ss_dssp -----------------SCHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT-S--
T ss_pred -----------------CCcHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCC-c--
Confidence 333333 889999999999999999999999999999999877532 2
Q ss_pred CCCCCCCCcEEecCCCcchH
Q 017067 349 SRAEFPSANAVMDGFGGADL 368 (378)
Q Consensus 349 ~~~~l~~ad~vi~~l~e~~~ 368 (378)
.......||+|+++..+...
T Consensus 128 ~~~~~~~ad~v~~~~~~~g~ 147 (180)
T 1k1e_A 128 PIYVKNAVDHVLSTHGGKGA 147 (180)
T ss_dssp CHHHHTTSSEECSSCTTTTH
T ss_pred cHHHHhhCCEEecCCCCCcH
Confidence 22223458999999876553
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=6.8e-17 Score=152.12 Aligned_cols=115 Identities=15% Similarity=0.198 Sum_probs=91.9
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
..+++||+.++|+.|+++|++++++||. ....++.+++.+|+.++|+..+
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~---~~~~~~~~~~~~gl~~~f~~~~--------------------------- 183 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSGD---KEDKVKELSKELNIQEYYSNLS--------------------------- 183 (263)
Confidence 3568999999999999999999999994 4688899999999988886521
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
|+. +..++++++.+|++|+||||+.+|+.+++++|+.+.
T Consensus 184 ----------------------------------p~~-------k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va 222 (263)
T 2yj3_A 184 ----------------------------------PED-------KVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVA 222 (263)
Confidence 000 566789999999999999999999999999996544
Q ss_pred EEcCCCCCCCCCCCCcEEe--cCCCcchHHH
Q 017067 342 VMRSSLTSRAEFPSANAVM--DGFGGADLTI 370 (378)
Q Consensus 342 ~v~~~~~~~~~l~~ad~vi--~~l~e~~~~~ 370 (378)
+ +.........||+++ +++.++...+
T Consensus 223 ~---g~~~~~~~~~ad~v~~~~~l~~l~~~l 250 (263)
T 2yj3_A 223 M---GNGVDISKNVADIILVSNDIGTLLGLI 250 (263)
Confidence 3 333334445689999 9999976543
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.59 E-value=5.4e-16 Score=129.12 Aligned_cols=102 Identities=18% Similarity=0.284 Sum_probs=85.8
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhH
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 264 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~ 264 (378)
++||+.++|+.|+++|++++|+||.. ...+..+++.+|+..+|+. ++++++..
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~---~~~~~~~l~~~~l~~~f~~-i~~~~~~~----------------------- 71 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDP---GGLGAAPIRELETNGVVDK-VLLSGELG----------------------- 71 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSC---CGGGGHHHHHHHHTTSSSE-EEEHHHHS-----------------------
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCC---HHHHHHHHHHCChHhhccE-EEEeccCC-----------------------
Confidence 46789999999999999999999954 4667788899999999987 34443321
Q ss_pred HHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEc
Q 017067 265 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (378)
Q Consensus 265 ~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~ 344 (378)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+++||.+|++.
T Consensus 72 -------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~ 118 (137)
T 2pr7_A 72 -------------------VEKPEEAA--------------FQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQ 118 (137)
T ss_dssp -------------------CCTTSHHH--------------HHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECS
T ss_pred -------------------CCCCCHHH--------------HHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeC
Confidence 12666665 999999999999999999999999999999999999988
Q ss_pred CC
Q 017067 345 SS 346 (378)
Q Consensus 345 ~~ 346 (378)
++
T Consensus 119 ~~ 120 (137)
T 2pr7_A 119 QF 120 (137)
T ss_dssp CH
T ss_pred Ch
Confidence 76
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=8.1e-15 Score=130.78 Aligned_cols=104 Identities=13% Similarity=0.119 Sum_probs=83.3
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhh
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~ 271 (378)
+|+.|+++|++++|+||. ....++.+++.+|+..+|..
T Consensus 61 ~l~~L~~~g~~v~ivT~~---~~~~~~~~l~~lgl~~~~~~--------------------------------------- 98 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGR---KAKLVEDRCATLGITHLYQG--------------------------------------- 98 (188)
T ss_dssp HHHHHHTTTCEEEEECSS---CCHHHHHHHHHHTCCEEECS---------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCC---ChHHHHHHHHHcCCceeecC---------------------------------------
Confidence 889999999999999995 45888999999999877643
Q ss_pred HHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC
Q 017067 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA 351 (378)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 351 (378)
.||.|.+ |+.+++++|++|++|++|||+.+|+.+|+++|+.+++.. + ...
T Consensus 99 -------------~kpk~~~--------------~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~-~--~~~ 148 (188)
T 2r8e_A 99 -------------QSNKLIA--------------FSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVAD-A--HPL 148 (188)
T ss_dssp -------------CSCSHHH--------------HHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTT-S--CTT
T ss_pred -------------CCCCHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecC-c--CHH
Confidence 1444443 999999999999999999999999999999999876533 2 222
Q ss_pred CCCCCcEEecCCCcch
Q 017067 352 EFPSANAVMDGFGGAD 367 (378)
Q Consensus 352 ~l~~ad~vi~~l~e~~ 367 (378)
....||+++++.++..
T Consensus 149 ~~~~ad~v~~~~~~~g 164 (188)
T 2r8e_A 149 LIPRADYVTRIAGGRG 164 (188)
T ss_dssp TGGGSSEECSSCTTTT
T ss_pred HHhcCCEEEeCCCCCc
Confidence 2235899999986554
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.9e-15 Score=136.46 Aligned_cols=104 Identities=16% Similarity=0.084 Sum_probs=81.7
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhh
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~ 271 (378)
.|+.|+++|++++|+||. ....++.+++.+|+..+|...
T Consensus 60 ~l~~L~~~G~~~~ivT~~---~~~~~~~~l~~lgi~~~~~~~-------------------------------------- 98 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGR---RSQIVENRMKALGISLIYQGQ-------------------------------------- 98 (195)
T ss_dssp HHHHHHHTTCEEEEECSS---CCHHHHHHHHHTTCCEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEECc---CHHHHHHHHHHcCCcEEeeCC--------------------------------------
Confidence 478999999999999994 468999999999999877541
Q ss_pred HHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC
Q 017067 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA 351 (378)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 351 (378)
||.|.. ++.+++++|++|++|++|||+.||+.+++++|+.+++. +....
T Consensus 99 --------------k~k~~~--------------~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~---na~~~ 147 (195)
T 3n07_A 99 --------------DDKVQA--------------YYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA---DGHPL 147 (195)
T ss_dssp --------------SSHHHH--------------HHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT---TSCHH
T ss_pred --------------CCcHHH--------------HHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC---ChHHH
Confidence 333332 89999999999999999999999999999999765532 22222
Q ss_pred CCCCCcEEecCCCcch
Q 017067 352 EFPSANAVMDGFGGAD 367 (378)
Q Consensus 352 ~l~~ad~vi~~l~e~~ 367 (378)
....||+|+.+.++-+
T Consensus 148 ~~~~ad~v~~~~~~~G 163 (195)
T 3n07_A 148 LAQRANYVTHIKGGHG 163 (195)
T ss_dssp HHHHCSEECSSCTTTT
T ss_pred HHHhCCEEEcCCCCCC
Confidence 2335899998876544
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=2e-15 Score=133.52 Aligned_cols=107 Identities=13% Similarity=0.180 Sum_probs=83.2
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCC------------chHHHHHHHHHhCccccchheeech----hhHHHhhhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS------------GDRIARSVVEKLGSERISKIKIVGN----EEVERSLYG 246 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~------------~~~~~~~~l~~lgi~~~f~~~iv~~----~~~~~~~~~ 246 (378)
.+++||+.++|+.|+++|++++|+||.... ....+..+++.+|+. |+..+++. +++.
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~----- 113 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECD----- 113 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCS-----
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCccccc-----
Confidence 458999999999999999999999995200 356788889999987 66533331 1110
Q ss_pred ccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 017067 247 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 326 (378)
Q Consensus 247 ~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs 326 (378)
.+||+|++ |+.+++++|++|++|+||||+
T Consensus 114 -------------------------------------~~KP~p~~--------------~~~~~~~~gi~~~~~l~VGD~ 142 (176)
T 2fpr_A 114 -------------------------------------CRKPKVKL--------------VERYLAEQAMDRANSYVIGDR 142 (176)
T ss_dssp -------------------------------------SSTTSCGG--------------GGGGC----CCGGGCEEEESS
T ss_pred -------------------------------------ccCCCHHH--------------HHHHHHHcCCCHHHEEEEcCC
Confidence 23888777 899999999999999999999
Q ss_pred HhHHHHHHHcCCCEEEEcCCC
Q 017067 327 QSGVAGAQRIGMPCVVMRSSL 347 (378)
Q Consensus 327 ~~Di~aA~~aG~~~i~v~~~~ 347 (378)
.+|+++|+++||++|++.++.
T Consensus 143 ~~Di~~A~~aG~~~i~v~~~~ 163 (176)
T 2fpr_A 143 ATDIQLAENMGINGLRYDRET 163 (176)
T ss_dssp HHHHHHHHHHTSEEEECBTTT
T ss_pred HHHHHHHHHcCCeEEEEcCCc
Confidence 999999999999999998774
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.56 E-value=4.8e-14 Score=131.34 Aligned_cols=67 Identities=10% Similarity=0.217 Sum_probs=55.8
Q ss_pred HHHHHHHcCCCCCcEEEEeCC-HhHHHHHHHcCCCEEEEcCCCCCCCCCCC----CcEEecCCCcchHHHHH
Q 017067 306 LRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSSLTSRAEFPS----ANAVMDGFGGADLTISK 372 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~~~l~~----ad~vi~~l~e~~~~~~~ 372 (378)
|+.+++++|++|++|++|||+ .|||.+|+.+|+.++++.++....+++.. ||+|++++.|+..-++.
T Consensus 189 ~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~~~~ 260 (266)
T 3pdw_A 189 MEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPYIEG 260 (266)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGGHHHHHH
T ss_pred HHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHHhhc
Confidence 999999999999999999999 79999999999999999999887776654 89999999998765543
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.54 E-value=6e-15 Score=132.36 Aligned_cols=104 Identities=13% Similarity=0.092 Sum_probs=82.7
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhh
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~ 271 (378)
.|+.|+++|++++|+||. ....+..+++.+|+..+|+..
T Consensus 54 ~l~~L~~~g~~~~ivTn~---~~~~~~~~l~~lgl~~~~~~~-------------------------------------- 92 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTA---QNAVVDHRMEQLGITHYYKGQ-------------------------------------- 92 (191)
T ss_dssp HHHHHHHTTCEEEEECSC---CSHHHHHHHHHHTCCEEECSC--------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCc---ChHHHHHHHHHcCCccceeCC--------------------------------------
Confidence 478999999999999994 468899999999999877641
Q ss_pred HHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC
Q 017067 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA 351 (378)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 351 (378)
||.|.+ |+.+++++|++|++|++|||+.+|+.+++.+|+.+++ .++ ...
T Consensus 93 --------------kpk~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~--~~~ 141 (191)
T 3n1u_A 93 --------------VDKRSA--------------YQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAV-SNA--VPQ 141 (191)
T ss_dssp --------------SSCHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTC--CHH
T ss_pred --------------CChHHH--------------HHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEe-CCc--cHH
Confidence 444333 8999999999999999999999999999999988743 322 222
Q ss_pred CCCCCcEEecCCCcch
Q 017067 352 EFPSANAVMDGFGGAD 367 (378)
Q Consensus 352 ~l~~ad~vi~~l~e~~ 367 (378)
....||+|+++.++.+
T Consensus 142 ~~~~ad~v~~~~~~~g 157 (191)
T 3n1u_A 142 VLEFADWRTERTGGRG 157 (191)
T ss_dssp HHHHSSEECSSCTTTT
T ss_pred HHHhCCEEecCCCCCc
Confidence 2345899999866543
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1.7e-14 Score=144.67 Aligned_cols=99 Identities=19% Similarity=0.252 Sum_probs=78.7
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCC------Cch---HHHHHHHHHhCccccchheeechhhHHHhhhhccccccccc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGK------SGD---RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 255 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~------~~~---~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~ 255 (378)
++||+.++|+.|+++|++++|+||... ... ..+..+++.+|+. |+. +++.+++.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~-i~~~~~~~-------------- 150 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQV-LVATHAGL-------------- 150 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEE-EEECSSST--------------
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEE-EEECCCCC--------------
Confidence 789999999999999999999999420 001 2267888899984 655 33333221
Q ss_pred cCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcC----CCCCcEEEEeCCH----
Q 017067 256 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGSQ---- 327 (378)
Q Consensus 256 ~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lg----v~p~~~i~VGDs~---- 327 (378)
.+||+|++ |..+++++| ++|++|+||||+.
T Consensus 151 ----------------------------~~KP~p~~--------------~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~ 188 (416)
T 3zvl_A 151 ----------------------------NRKPVSGM--------------WDHLQEQANEGIPISVEDSVFVGDAAGRLA 188 (416)
T ss_dssp ----------------------------TSTTSSHH--------------HHHHHHHSSTTCCCCGGGCEEECSCSCBCT
T ss_pred ----------------------------CCCCCHHH--------------HHHHHHHhCCCCCCCHHHeEEEECCCCCcc
Confidence 23888777 999999997 9999999999997
Q ss_pred -------------hHHHHHHHcCCCEEE
Q 017067 328 -------------SGVAGAQRIGMPCVV 342 (378)
Q Consensus 328 -------------~Di~aA~~aG~~~i~ 342 (378)
+|+++|+++|++++.
T Consensus 189 ~~~~~~~~~d~s~~Di~~A~~aGi~f~~ 216 (416)
T 3zvl_A 189 NWAPGRKKKDFSCADRLFALNVGLPFAT 216 (416)
T ss_dssp TSSTTCCSCCSCCHHHHHHHHHTCCEEC
T ss_pred cccccccccCCChhhHHHHHHcCCcccC
Confidence 899999999999874
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.5e-14 Score=136.70 Aligned_cols=141 Identities=17% Similarity=0.030 Sum_probs=86.9
Q ss_pred CCCCCHHHHHHHHHHC-CCcEEEEeCCCCC------------------chHHHHHHHHHhCccccchheeechhhHHHhh
Q 017067 184 PLRPGVEDFVDDAYNE-GIPLIVLTAYGKS------------------GDRIARSVVEKLGSERISKIKIVGNEEVERSL 244 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~-G~~v~ivTn~~~~------------------~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~ 244 (378)
.+.+++.++++.++++ |+++++.|+.... ....+..+++.+|+..+|... .... +.
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---~~~~--~~ 196 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRC---NPLA--GD 196 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEEC---CGGG--TC
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEc---cccc--cC
Confidence 4778999999999998 9999999974100 234556666777776555321 0000 00
Q ss_pred hhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEe
Q 017067 245 YGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIA 324 (378)
Q Consensus 245 ~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VG 324 (378)
......++.+.. .++++.. ++.+++++|++|++|++||
T Consensus 197 ~~~~~~~~~~~~---------------------------------------~~~k~~~---~~~~~~~~~~~~~~~~~~G 234 (289)
T 3gyg_A 197 PEDSYDVDFIPI---------------------------------------GTGKNEI---VTFMLEKYNLNTERAIAFG 234 (289)
T ss_dssp CTTEEEEEEEES---------------------------------------CCSHHHH---HHHHHHHHTCCGGGEEEEE
T ss_pred CCCceEEEEEeC---------------------------------------CCCHHHH---HHHHHHHcCCChhhEEEEc
Confidence 000000111111 1122222 8999999999999999999
Q ss_pred CCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCc--chHHHHHHh
Q 017067 325 GSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGG--ADLTISKLR 374 (378)
Q Consensus 325 Ds~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e--~~~~~~~l~ 374 (378)
|+.||+.+++.+|+.+++ ++........|++++++..+ +...+.+++
T Consensus 235 Ds~~D~~~~~~ag~~~~~---~~~~~~~~~~a~~v~~~~~~~gv~~~~~~~~ 283 (289)
T 3gyg_A 235 DSGNDVRMLQTVGNGYLL---KNATQEAKNLHNLITDSEYSKGITNTLKKLI 283 (289)
T ss_dssp CSGGGHHHHTTSSEEEEC---TTCCHHHHHHCCCBCSSCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHhCCcEEEE---CCccHHHHHhCCEEcCCCCcCHHHHHHHHHH
Confidence 999999999999955333 32232223347899988877 333344443
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.47 E-value=1.2e-13 Score=130.17 Aligned_cols=67 Identities=9% Similarity=-0.039 Sum_probs=53.8
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCc--chHHHHHHhh
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGG--ADLTISKLRH 375 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e--~~~~~~~l~~ 375 (378)
++.+++++|+++++|++|||+.||+.|++.||+ .+..++........||+|+++..+ +...+.+++.
T Consensus 207 l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~---~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~ 275 (290)
T 3dnp_A 207 LALVASELGLSMDDVVAIGHQYDDLPMIELAGL---GVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFR 275 (290)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSE---EEECTTSCHHHHHHSSEECCCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEECCchhhHHHHHhcCC---EEEecCCcHHHHHhcCEECCCCCccHHHHHHHHHHH
Confidence 899999999999999999999999999999994 555555554445568999999888 5445665543
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.41 E-value=6.8e-13 Score=123.11 Aligned_cols=60 Identities=8% Similarity=0.042 Sum_probs=48.5
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
+++.+++++|+++++|++|||+.||+.|++.+|+.+++ ++....-...|++|+++..+-+
T Consensus 187 ~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam---~na~~~~k~~A~~v~~~~~~dG 246 (258)
T 2pq0_A 187 GIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM---GNAHEEVKRVADFVTKPVDKEG 246 (258)
T ss_dssp HHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE---TTCCHHHHHTCSEEECCGGGTH
T ss_pred HHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe---CCCcHHHHHhCCEEeCCCCcch
Confidence 48999999999999999999999999999999986553 3333333345899999887754
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.40 E-value=9.3e-14 Score=130.14 Aligned_cols=59 Identities=8% Similarity=-0.045 Sum_probs=50.3
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
++.+++++|+++++|++|||+.||+.|++.|| +.|..++........||+|+++..+-+
T Consensus 202 l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag---~~vam~na~~~~k~~A~~v~~~~~e~G 260 (279)
T 4dw8_A 202 LSVLLENIGMTREEVIAIGDGYNDLSMIKFAG---MGVAMGNAQEPVKKAADYITLTNDEDG 260 (279)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHCSEECCCGGGTH
T ss_pred HHHHHHHcCCCHHHEEEECCChhhHHHHHHcC---cEEEcCCCcHHHHHhCCEEcCCCCCcH
Confidence 89999999999999999999999999999999 566666655555556899999887754
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.5e-12 Score=119.41 Aligned_cols=66 Identities=11% Similarity=0.143 Sum_probs=50.7
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCc--chHHHHHHh
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGG--ADLTISKLR 374 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e--~~~~~~~l~ 374 (378)
++.+++++|+++++|++|||+.||+.+++.+|+. +.+.++ ...-...|++|+++..+ +...+.++.
T Consensus 158 ~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~~~~--~~~~~~~a~~v~~~~~e~Gv~~~l~~~~ 225 (231)
T 1wr8_A 158 IEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQA--PKILKENADYVTKKEYGEGGAEAIYHIL 225 (231)
T ss_dssp HHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EECTTS--CHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEecCC--CHHHHhhCCEEecCCCcchHHHHHHHHH
Confidence 8999999999999999999999999999999987 445443 22222468999999877 333355443
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-13 Score=130.27 Aligned_cols=59 Identities=8% Similarity=0.002 Sum_probs=48.5
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
++.+++++|++++++++|||+.||+.|++.+|+ .|..++........||+|+++..+-+
T Consensus 216 l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~---~vam~na~~~~k~~A~~v~~s~~edG 274 (283)
T 3dao_A 216 LSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGI---SYAVSNARQEVIAAAKHTCAPYWENG 274 (283)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSE---EEEETTSCHHHHHHSSEEECCGGGTH
T ss_pred HHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCC---EEEcCCCCHHHHHhcCeECCCCCCCh
Confidence 889999999999999999999999999999994 44445444444456899999888743
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.9e-12 Score=114.11 Aligned_cols=59 Identities=10% Similarity=0.092 Sum_probs=47.6
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
++.+++++|++|++|++|||+.||+.+++.+|+.++ +.+. ...-...||+|+.+-++-+
T Consensus 88 l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a-~~na--~~~~k~~Ad~v~~~~~~~G 146 (168)
T 3ewi_A 88 VDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAV-PADA--CSGAQKAVGYICKCSGGRG 146 (168)
T ss_dssp HHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEE-CTTC--CHHHHTTCSEECSSCTTTT
T ss_pred HHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEE-eCCh--hHHHHHhCCEEeCCCCCcc
Confidence 899999999999999999999999999999998754 3332 3333455899999876643
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.35 E-value=7.5e-13 Score=125.96 Aligned_cols=104 Identities=13% Similarity=0.058 Sum_probs=80.2
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH--------hCccccchheeechhhHHHhhhhcccccccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK--------LGSERISKIKIVGNEEVERSLYGQFVLGKGI 254 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~--------lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v 254 (378)
.+++||+.++|+.|+++|++++|+||+.......+...++. +|+ .|+. +++.++..
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~-~~~~~~~~------------- 250 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVM-QCQREQGD------------- 250 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSE-EEECCTTC-------------
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--Cchh-eeeccCCC-------------
Confidence 45799999999999999999999999763323334566777 888 3665 33332210
Q ss_pred ccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCc-EEEEeCCHhHHHHH
Q 017067 255 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN-CFLIAGSQSGVAGA 333 (378)
Q Consensus 255 ~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~-~i~VGDs~~Di~aA 333 (378)
.||+|++ +..++++++.++.+ |+||||+.+|+++|
T Consensus 251 ------------------------------~kp~p~~--------------~~~~~~~~~~~~~~~~~~vgD~~~di~~a 286 (301)
T 1ltq_A 251 ------------------------------TRKDDVV--------------KEEIFWKHIAPHFDVKLAIDDRTQVVEMW 286 (301)
T ss_dssp ------------------------------CSCHHHH--------------HHHHHHHHTTTTCEEEEEEECCHHHHHHH
T ss_pred ------------------------------CcHHHHH--------------HHHHHHHHhccccceEEEeCCcHHHHHHH
Confidence 1555555 88899999887654 79999999999999
Q ss_pred HHcCCCEEEEcCC
Q 017067 334 QRIGMPCVVMRSS 346 (378)
Q Consensus 334 ~~aG~~~i~v~~~ 346 (378)
+++||++|.|.+|
T Consensus 287 ~~aG~~~~~v~~G 299 (301)
T 1ltq_A 287 RRIGVECWQVASG 299 (301)
T ss_dssp HHTTCCEEECSCC
T ss_pred HHcCCeEEEecCC
Confidence 9999999999987
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.2e-12 Score=123.26 Aligned_cols=51 Identities=18% Similarity=0.293 Sum_probs=40.5
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc--ccchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKI 232 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~--~~f~~ 232 (378)
..+++||+.++|+.|+++|++++|+||........+...++.+|+. .+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~v 151 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHI 151 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTE
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceE
Confidence 3568999999999999999999999995422245667788899998 55554
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.34 E-value=3.2e-13 Score=125.64 Aligned_cols=60 Identities=10% Similarity=0.031 Sum_probs=50.4
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
+++.+++++|++++++++|||+.||+.|++.|| +.|..++........|++|+++..+-+
T Consensus 204 ~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag---~~vam~na~~~~k~~A~~v~~~~~edG 263 (274)
T 3fzq_A 204 AIKRLQERLGVTQKETICFGDGQNDIVMFQASD---VTIAMKNSHQQLKDIATSICEDIFDNG 263 (274)
T ss_dssp HHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCS---EEEEETTSCHHHHHHCSEEECCGGGTH
T ss_pred HHHHHHHHcCCCHHHEEEECCChhHHHHHHhcC---ceEEecCccHHHHHhhhheeCCCchhH
Confidence 389999999999999999999999999999999 455556555554556899999988865
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=4.8e-12 Score=124.29 Aligned_cols=54 Identities=15% Similarity=0.296 Sum_probs=45.3
Q ss_pred CCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCC---CCCcEEecCCCcchHH
Q 017067 316 PVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEF---PSANAVMDGFGGADLT 369 (378)
Q Consensus 316 ~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l---~~ad~vi~~l~e~~~~ 369 (378)
++++|+||||+. +||.+|+++||++|+|.++.....+. ..+|++++++.|+...
T Consensus 289 ~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~pd~vi~~l~el~~~ 346 (352)
T 3kc2_A 289 PFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVYNEGDDLKECKPTLIVNDVFDAVTK 346 (352)
T ss_dssp TSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSCCTTCCCTTCCCSEECSSHHHHHHH
T ss_pred CcceEEEEecCcHHHHHHHHHcCCEEEEEccCCCCcccccccCCCCEEECCHHHHHHH
Confidence 679999999999 59999999999999999987654432 3489999999997543
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.33 E-value=9.8e-13 Score=123.13 Aligned_cols=60 Identities=8% Similarity=-0.022 Sum_probs=42.0
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
+++.+++++|+++++|++|||+.||+.|++.|| +.|..++........||+|+++..+-+
T Consensus 201 ~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag---~~vam~na~~~~k~~A~~v~~~~~e~G 260 (279)
T 3mpo_A 201 TLSELVDQLGLTADDVMTLGDQGNDLTMIKYAG---LGVAMGNAIDEVKEAAQAVTLTNAENG 260 (279)
T ss_dssp HHHHHHHHTTCCGGGEEEC--CCTTHHHHHHST---EECBC---CCHHHHHCSCBC------C
T ss_pred HHHHHHHHcCCCHHHEEEECCchhhHHHHHhcC---ceeeccCCCHHHHHhcceeccCCCccH
Confidence 389999999999999999999999999999999 666666655555556899998877643
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.9e-13 Score=129.10 Aligned_cols=67 Identities=6% Similarity=-0.114 Sum_probs=54.2
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCc--chHHHHHHhh
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGG--ADLTISKLRH 375 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e--~~~~~~~l~~ 375 (378)
++.+++++|++++++++|||+.||+.|++.|| +.|..++........||+|+++..+ +...+.+++.
T Consensus 233 l~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag---~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~ 301 (304)
T 3l7y_A 233 LQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAK---YSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLA 301 (304)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHCT---EEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred HHHHHHHhCcCHHHEEEECCCHHHHHHHHhcC---CeEEcCCcCHHHHHhccEEcCCCCcchHHHHHHHHHH
Confidence 88999999999999999999999999999999 5555565555555568999999888 4445665543
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.32 E-value=4e-13 Score=125.15 Aligned_cols=65 Identities=3% Similarity=0.005 Sum_probs=50.4
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCc--chHHHHHH
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGG--ADLTISKL 373 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e--~~~~~~~l 373 (378)
++.+++++|+++++|++|||+.||+.|++.+|+.+++ ++....-...|++++++..+ +...+.++
T Consensus 192 ~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~---~n~~~~~~~~a~~v~~~~~~dGv~~~l~~~ 258 (261)
T 2rbk_A 192 IDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM---GQAKEDVKAAADYVTAPIDEDGISKAMKHF 258 (261)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe---cCccHHHHhhCCEEeccCchhhHHHHHHHh
Confidence 8999999999999999999999999999999975433 33322222358999999998 55445443
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.23 E-value=1.1e-11 Score=115.28 Aligned_cols=60 Identities=15% Similarity=0.116 Sum_probs=50.9
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
+++.+++++|++++++++|||+.||+.|++.|| +.|..++...+-...||+|+++..+-+
T Consensus 198 ~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag---~~vam~na~~~~k~~Ad~v~~~~~edG 257 (268)
T 3r4c_A 198 GLSLFADYYRVKVSEIMACGDGGNDIPMLKAAG---IGVAMGNASEKVQSVADFVTDTVDNSG 257 (268)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHTCSEECCCTTTTH
T ss_pred HHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCC---CeEEeCCCcHHHHHhcCEeeCCCCcCH
Confidence 389999999999999999999999999999999 556666555555556899999988865
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.11 E-value=1.2e-10 Score=110.07 Aligned_cols=60 Identities=18% Similarity=0.087 Sum_probs=47.8
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
+++.+++++|+++++|++|||+.||+.|++.+|+ .|.+.++ ...-...|++|+++..+-+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~~~--~~~~~~~a~~v~~~~~~dG 279 (288)
T 1nrw_A 220 ALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGNA--REDIKSIADAVTLTNDEHG 279 (288)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTTC--CHHHHHHCSEECCCGGGTH
T ss_pred HHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc-EEEEcCC--CHHHHhhCceeecCCCcCh
Confidence 4899999999999999999999999999999998 5556543 2222234899999887754
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.10 E-value=2.2e-11 Score=114.19 Aligned_cols=66 Identities=12% Similarity=-0.031 Sum_probs=49.7
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCc--chHHHHHHh
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGG--ADLTISKLR 374 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e--~~~~~~~l~ 374 (378)
++.+++++|+++++|++|||+.||+.|++.+|+.+ .+.++ ...-...|++|+++..+ +...+.++.
T Consensus 196 ~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~v-a~~na--~~~~k~~a~~v~~~~~~dGVa~~l~~~~ 263 (271)
T 1rlm_A 196 ISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSF-AMGNA--AENIKQIARYATDDNNHEGALNVIQAVL 263 (271)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEE-ECTTC--CHHHHHHCSEECCCGGGTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeE-EeCCc--cHHHHHhCCeeCcCCCCChHHHHHHHHH
Confidence 89999999999999999999999999999999853 34332 22222358999988876 333455544
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1.6e-10 Score=106.07 Aligned_cols=59 Identities=14% Similarity=-0.031 Sum_probs=46.2
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcc
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~ 366 (378)
+++.+++++|++++++++|||+.||+.|++.+|+. +.+.++ ...-...|++|+++..+-
T Consensus 157 ~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~-va~~n~--~~~~k~~a~~v~~~~~~~ 215 (227)
T 1l6r_A 157 AVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRK-ACPANA--TDNIKAVSDFVSDYSYGE 215 (227)
T ss_dssp HHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEE-EECTTS--CHHHHHHCSEECSCCTTH
T ss_pred HHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCce-EEecCc--hHHHHHhCCEEecCCCCc
Confidence 38888999999999999999999999999999975 344333 222223589999888764
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.10 E-value=9.7e-11 Score=113.33 Aligned_cols=58 Identities=10% Similarity=0.021 Sum_probs=42.0
Q ss_pred CCCCCc----EEEEeCCHhHHHHHHHc----CCCEEEEcCCCCCCCCCCCCcEEecCCCc--chHHHHHHhh
Q 017067 314 EKPVRN----CFLIAGSQSGVAGAQRI----GMPCVVMRSSLTSRAEFPSANAVMDGFGG--ADLTISKLRH 375 (378)
Q Consensus 314 gv~p~~----~i~VGDs~~Di~aA~~a----G~~~i~v~~~~~~~~~l~~ad~vi~~l~e--~~~~~~~l~~ 375 (378)
|+++++ |++|||+.||+.|++.| |+.+++ ++ .......||+|+.+..+ +...+.++..
T Consensus 214 gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na--~~~lk~~Ad~v~~~~~~dGV~~~l~~~~~ 281 (332)
T 1y8a_A 214 GYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NG--NEYALKHADVVIISPTAMSEAKVIELFME 281 (332)
T ss_dssp HHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SC--CHHHHTTCSEEEECSSTHHHHHHHHHHHH
T ss_pred ccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cC--CHHHHhhCcEEecCCCCCHHHHHHHHHHH
Confidence 778889 99999999999999999 987554 33 22223458999987544 4445555543
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.05 E-value=7.7e-11 Score=111.12 Aligned_cols=60 Identities=12% Similarity=0.027 Sum_probs=48.2
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCc--EEecCCCcch
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSAN--AVMDGFGGAD 367 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad--~vi~~l~e~~ 367 (378)
+++.+++++|++++++++|||+.||+.|++.|| +.|..++...+....|+ .|+.+..+-+
T Consensus 213 al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag---~~vAm~Na~~~vk~~A~~~~v~~sn~edG 274 (285)
T 3pgv_A 213 ALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAG---KGCIMANAHQRLKDLHPELEVIGSNADDA 274 (285)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHCTTSEECCCGGGTH
T ss_pred HHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcC---CEEEccCCCHHHHHhCCCCEecccCCcch
Confidence 388999999999999999999999999999999 66666665555444566 5777776643
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.97 E-value=9.1e-10 Score=103.84 Aligned_cols=71 Identities=14% Similarity=0.078 Sum_probs=52.0
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCc--chHHHHHHhhccC
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGG--ADLTISKLRHSQW 378 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e--~~~~~~~l~~~~~ 378 (378)
+++.+++++|++++++++|||+.||+.|++.+|+ .|.+.++ .......|++|+++..+ +...+.++....|
T Consensus 202 ~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~n~--~~~~~~~a~~v~~~~~~dGV~~~l~~~~~~~~ 274 (282)
T 1rkq_A 202 GVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV-GVAVDNA--IPSVKEVANFVTKSNLEDGVAFAIEKYVLNEG 274 (282)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTS--CHHHHHHCSEECCCTTTTHHHHHHHHHTTC--
T ss_pred HHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCc-EEEecCC--cHHHHhhCCEEecCCCcchHHHHHHHHHhcCC
Confidence 3888999999999999999999999999999997 3444333 22222348999988776 5555666655443
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=98.93 E-value=7.6e-09 Score=97.17 Aligned_cols=51 Identities=12% Similarity=0.237 Sum_probs=43.0
Q ss_pred CCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCC-chHHHHHHHHHhCccccch
Q 017067 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISK 231 (378)
Q Consensus 181 ~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~-~~~~~~~~l~~lgi~~~f~ 231 (378)
...+++||+.++|+.|+++|++++|+||.... ....+...++.+|+...++
T Consensus 98 g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~ 149 (260)
T 3pct_A 98 RQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND 149 (260)
T ss_dssp TCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST
T ss_pred CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc
Confidence 34679999999999999999999999996532 3468889999999987764
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=98.89 E-value=5.3e-09 Score=98.33 Aligned_cols=50 Identities=14% Similarity=0.179 Sum_probs=42.2
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCC-chHHHHHHHHHhCccccch
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISK 231 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~-~~~~~~~~l~~lgi~~~f~ 231 (378)
..+++||+.++|+.|+++|++++|+||.... ....+...++.+|+..+++
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~ 149 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE 149 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc
Confidence 4679999999999999999999999996532 3468889999999987663
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.88 E-value=2.2e-09 Score=100.35 Aligned_cols=59 Identities=10% Similarity=-0.004 Sum_probs=45.8
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcc
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~ 366 (378)
+++.+++++|+++++|++|||+.||+.|++.+|+.+ ..++....-...|++++++..+-
T Consensus 194 ~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v---~~~n~~~~~~~~a~~v~~~~~~d 252 (268)
T 1nf2_A 194 ALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRV---AMENAIEKVKEASDIVTLTNNDS 252 (268)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEE---ECTTSCHHHHHHCSEECCCTTTT
T ss_pred HHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEE---EecCCCHHHHhhCCEEEccCCcc
Confidence 389999999999999999999999999999999743 33333222223489999887664
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.80 E-value=5.1e-09 Score=99.51 Aligned_cols=49 Identities=24% Similarity=0.480 Sum_probs=43.1
Q ss_pred HHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 177 FLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 177 ~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
.+.....+++||+.++++.|+++|++++++|+ +....++.+++.+|+..
T Consensus 134 ~v~~~~i~l~~g~~e~i~~l~~~gi~v~ivSg---g~~~~i~~i~~~~g~~~ 182 (297)
T 4fe3_A 134 IVADSDVMLKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQAGVYH 182 (297)
T ss_dssp HHHTSCCCBCBTHHHHHHHHHHTTCCEEEEEE---EEHHHHHHHHHHTTCCC
T ss_pred HHHhcCCCCCCcHHHHHHHHHHcCCeEEEEeC---CcHHHHHHHHHHcCCCc
Confidence 34344688999999999999999999999999 67899999999999864
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.77 E-value=1e-08 Score=97.83 Aligned_cols=69 Identities=6% Similarity=0.071 Sum_probs=51.6
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEec-CCCc--chHHHHHHhhc
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMD-GFGG--ADLTISKLRHS 376 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~-~l~e--~~~~~~~l~~~ 376 (378)
+++.+++.+|++++++++|||+.||+.|++.+|+. |.+.++ ...-...|++|++ +..+ +...+.++...
T Consensus 228 ~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na--~~~~k~~a~~v~~~~~~~dGVa~~l~~~~~~ 299 (301)
T 2b30_A 228 GINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS-FAVANA--TDSAKSHAKCVLPVSHREGAVAYLLKKVFDL 299 (301)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE-EECTTC--CHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEEcCC--cHHHHhhCCEEEccCCCCcHHHHHHHHHHhc
Confidence 38899999999999999999999999999999974 344433 2222235899998 7765 44456666544
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.76 E-value=9.5e-10 Score=99.13 Aligned_cols=97 Identities=12% Similarity=0.117 Sum_probs=79.3
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
+.++||+.++|+.+++. ++++|+|++ ....++.+++.+++..+|+.. ++.++....
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss---~~~~a~~vl~~ld~~~~f~~~-l~rd~~~~~------------------- 122 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTAS---LAKYADPVADLLDRWGVFRAR-LFRESCVFH------------------- 122 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSS---CHHHHHHHHHHHCCSSCEEEE-ECGGGCEEE-------------------
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCC---CHHHHHHHHHHhCCcccEEEE-EEcccceec-------------------
Confidence 45899999999999998 999999994 579999999999999999874 444433210
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
| ++ |..+++++|.++++||+|||+..++.++.++||.++.
T Consensus 123 -----------------------k---~~--------------~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~ 162 (195)
T 2hhl_A 123 -----------------------R---GN--------------YVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQS 162 (195)
T ss_dssp -----------------------T---TE--------------EECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCC
T ss_pred -----------------------C---Cc--------------eeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEee
Confidence 1 11 6667899999999999999999999999999977543
Q ss_pred E
Q 017067 343 M 343 (378)
Q Consensus 343 v 343 (378)
+
T Consensus 163 ~ 163 (195)
T 2hhl_A 163 W 163 (195)
T ss_dssp C
T ss_pred e
Confidence 3
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=1.2e-08 Score=94.58 Aligned_cols=56 Identities=9% Similarity=0.002 Sum_probs=44.1
Q ss_pred HHHHHHHcCCCC--CcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 306 LRAGAEYAEKPV--RNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 306 ~~~a~~~lgv~p--~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
++.+++++|+++ +++++|||+.||+.|++.+|+. +.+.+. .. + .++++..+.++-+
T Consensus 181 l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na--~~--~-~~~~~~~~~~~~g 238 (259)
T 3zx4_A 181 VARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLA-VYVGRG--DP--P-EGVLATPAPGPEG 238 (259)
T ss_dssp HHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEE-EECSSS--CC--C-TTCEECSSCHHHH
T ss_pred HHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCe-EEeCCh--hh--c-CCcEEeCCCCchH
Confidence 888999999999 9999999999999999999965 333333 22 3 5778887766543
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=98.67 E-value=4e-09 Score=93.80 Aligned_cols=94 Identities=15% Similarity=0.153 Sum_probs=77.2
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
..++||+.++|+.+++. +.++|+|+ +....++.+++.+++..+|... ++.++....
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~---~~~~~a~~vl~~ld~~~~f~~~-~~rd~~~~~------------------- 109 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTA---SLAKYADPVADLLDKWGAFRAR-LFRESCVFH------------------- 109 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECS---SCHHHHHHHHHHHCTTCCEEEE-ECGGGSEEE-------------------
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcC---CCHHHHHHHHHHHCCCCcEEEE-EeccCceec-------------------
Confidence 45899999999999998 99999999 4579999999999999998874 334332110
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
| +. |..+++++|.++++||+|||+..++.++.++|+.+
T Consensus 110 -----------------------k---~~--------------~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 110 -----------------------R---GN--------------YVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp -----------------------T---TE--------------EECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred -----------------------C---Cc--------------EeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 0 11 55668899999999999999999999999999884
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.61 E-value=5.7e-07 Score=89.12 Aligned_cols=42 Identities=17% Similarity=0.133 Sum_probs=38.2
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
.++||++++|+.|+++|++++|||+ +...+++.+.+.+|+..
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSg---g~~~~v~~ia~~lg~~y 262 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSA---SFIDIVRAFATDTNNNY 262 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHCTTSSC
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcC---CcHHHHHHHHHHhCccc
Confidence 3699999999999999999999999 67899999999998743
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.54 E-value=3.8e-07 Score=96.13 Aligned_cols=112 Identities=12% Similarity=0.118 Sum_probs=86.0
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
+++|++.+.|+.|+++|++++++|+ .....++.+.+.+|++..+...
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TG---d~~~~a~~ia~~lgi~~~~~~~------------------------------ 503 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVIAEV------------------------------ 503 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEECSC------------------------------
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCCCEEEEeC------------------------------
Confidence 4789999999999999999999999 5578899999999998665331
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
.| +.+ ..+++.+.-. ++++||||+.||+.|.+.|| +++
T Consensus 504 -----------------------------~P--~~K-------~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~---vgi 541 (645)
T 3j08_A 504 -----------------------------LP--HQK-------SEEVKKLQAK-EVVAFVGDGINDAPALAQAD---LGI 541 (645)
T ss_dssp -----------------------------CT--TCH-------HHHHHHHTTT-CCEEEEECSSSCHHHHHHSS---EEE
T ss_pred -----------------------------CH--HhH-------HHHHHHHhhC-CeEEEEeCCHhHHHHHHhCC---EEE
Confidence 01 111 1223444444 89999999999999999999 666
Q ss_pred cCCCCCCCCCCCCcEEe--cCCCcchHHH
Q 017067 344 RSSLTSRAEFPSANAVM--DGFGGADLTI 370 (378)
Q Consensus 344 ~~~~~~~~~l~~ad~vi--~~l~e~~~~~ 370 (378)
..+...+...+.||+|+ +++.++...+
T Consensus 542 amg~g~~~a~~~AD~vl~~~~~~~i~~~i 570 (645)
T 3j08_A 542 AVGSGSDVAVESGDIVLIRDDLRDVVAAI 570 (645)
T ss_dssp EECCCSCCSSCCSSSEESSCCTTHHHHHH
T ss_pred EeCCCcHHHHHhCCEEEecCCHHHHHHHH
Confidence 66666666677799999 7777765543
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.44 E-value=1.3e-06 Score=93.24 Aligned_cols=112 Identities=12% Similarity=0.118 Sum_probs=86.0
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
+++|++.+.|+.|+++|++++++|+ .....++.+.+.+|++..+...
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TG---d~~~~a~~ia~~lgi~~~~~~~------------------------------ 581 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVIAEV------------------------------ 581 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEECSC------------------------------
T ss_pred CcchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHcCCcEEEccC------------------------------
Confidence 5899999999999999999999999 5578899999999998655321
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
.| +.+ ..+.+.+.-. ++++||||+.||+.|.+.|| +++
T Consensus 582 -----------------------------~P--~~K-------~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~---vgi 619 (723)
T 3j09_A 582 -----------------------------LP--HQK-------SEEVKKLQAK-EVVAFVGDGINDAPALAQAD---LGI 619 (723)
T ss_dssp -----------------------------CT--TCH-------HHHHHHHTTT-CCEEEEECSSTTHHHHHHSS---EEE
T ss_pred -----------------------------CH--HHH-------HHHHHHHhcC-CeEEEEECChhhHHHHhhCC---EEE
Confidence 01 111 1123344433 89999999999999999999 777
Q ss_pred cCCCCCCCCCCCCcEEe--cCCCcchHHH
Q 017067 344 RSSLTSRAEFPSANAVM--DGFGGADLTI 370 (378)
Q Consensus 344 ~~~~~~~~~l~~ad~vi--~~l~e~~~~~ 370 (378)
..+...+...+.||+|+ +++.++...+
T Consensus 620 amg~g~~~a~~~AD~vl~~~~~~~i~~~i 648 (723)
T 3j09_A 620 AVGSGSDVAVESGDIVLIRDDLRDVVAAI 648 (723)
T ss_dssp ECCCCSCCSSCCSSEECSSCCTTHHHHHH
T ss_pred EeCCCcHHHHHhCCEEEeCCCHHHHHHHH
Confidence 77766666677899999 7777765443
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=1.3e-06 Score=89.25 Aligned_cols=129 Identities=10% Similarity=0.130 Sum_probs=81.0
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHh-C-------------ccccchheeechhhHHHhhhhcc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-G-------------SERISKIKIVGNEEVERSLYGQF 248 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~l-g-------------i~~~f~~~iv~~~~~~~~~~~~~ 248 (378)
+..-|++..+|..|++.| ++.++||+ ....+..+++.+ | |.++|++.|+.+.-. ..|+.-
T Consensus 245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS---~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP--~FF~~~ 318 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVG-KVFLATNS---DYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKP--LFFGEG 318 (555)
T ss_dssp BCCCTHHHHHHHHHHHHS-EEEEECSS---CHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTT--GGGTTC
T ss_pred cCCChHHHHHHHHHHHcC-CEEEEeCC---ChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCC--CcccCC
Confidence 446789999999999999 99999994 568888888887 6 568888855544211 122210
Q ss_pred ccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCC-cchhHHHH--HHHHHHHHHcCCCCCcEEEEeC
Q 017067 249 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSS-PESLDKIV--AALRAGAEYAEKPVRNCFLIAG 325 (378)
Q Consensus 249 v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~-p~~~~~~~--~a~~~a~~~lgv~p~~~i~VGD 325 (378)
.....|....+ +. .++.+. +-...++- =-+..+++.+|+.+++++||||
T Consensus 319 ~pfr~Vd~~tg--------------------------~l--~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGD 370 (555)
T 2jc9_A 319 TVLRQVDTKTG--------------------------KL--KIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGD 370 (555)
T ss_dssp CCEEEEETTTT--------------------------EE--CSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEES
T ss_pred CcceEeecCCC--------------------------cc--ccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECC
Confidence 00000000000 00 000000 00000010 0038889999999999999999
Q ss_pred CH-hHHHHHH-HcCCCEEEEcC
Q 017067 326 SQ-SGVAGAQ-RIGMPCVVMRS 345 (378)
Q Consensus 326 s~-~Di~aA~-~aG~~~i~v~~ 345 (378)
+. .||..++ .+||+|+.|-.
T Consensus 371 hIftDIl~~kk~~GWrTiLViP 392 (555)
T 2jc9_A 371 HIFGDILKSKKRQGWRTFLVIP 392 (555)
T ss_dssp CCCCCCHHHHHHHCCEEEEECT
T ss_pred EehHhHHhHHhhcCeEEEEEEe
Confidence 96 6999997 99999999864
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.12 E-value=2.9e-06 Score=90.60 Aligned_cols=112 Identities=14% Similarity=0.238 Sum_probs=81.8
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
++.|++.+.|+.|+++|++++++|+ .....++.+.+.+|+++.+... .
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTG---d~~~~a~~ia~~lgi~~v~a~~--~--------------------------- 601 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTG---DSKRTAEAVAGTLGIKKVVAEI--M--------------------------- 601 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECS---SCHHHHHHHHHHHTCCCEECSC--C---------------------------
T ss_pred cchhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCEEEEec--C---------------------------
Confidence 5789999999999999999999999 5578899999999998755321 0
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
|+.+..+ . +.+.-..+.++||||+.||+.|.+.|| +++
T Consensus 602 --------------------------------P~~K~~~---v----~~l~~~g~~V~~vGDG~ND~paL~~Ad---vGI 639 (736)
T 3rfu_A 602 --------------------------------PEDKSRI---V----SELKDKGLIVAMAGDGVNDAPALAKAD---IGI 639 (736)
T ss_dssp --------------------------------HHHHHHH---H----HHHHHHSCCEEEEECSSTTHHHHHHSS---EEE
T ss_pred --------------------------------HHHHHHH---H----HHHHhcCCEEEEEECChHhHHHHHhCC---EEE
Confidence 1111111 1 222223578999999999999999999 666
Q ss_pred cCCCCCCCCCCCCcEEe--cCCCcchHH
Q 017067 344 RSSLTSRAEFPSANAVM--DGFGGADLT 369 (378)
Q Consensus 344 ~~~~~~~~~l~~ad~vi--~~l~e~~~~ 369 (378)
..+...+...+.||+|+ +++.++...
T Consensus 640 Amg~g~d~a~~~AD~vl~~~~~~~i~~a 667 (736)
T 3rfu_A 640 AMGTGTDVAIESAGVTLLHGDLRGIAKA 667 (736)
T ss_dssp EESSSCSHHHHHCSEEECSCCSTTHHHH
T ss_pred EeCCccHHHHHhCCEEEccCCHHHHHHH
Confidence 66655555556689999 566666543
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=98.04 E-value=1e-05 Score=89.33 Aligned_cols=140 Identities=14% Similarity=0.161 Sum_probs=83.9
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccch---heeechhhHHHhhhhccccccccccCcc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK---IKIVGNEEVERSLYGQFVLGKGISSGVD 259 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~---~~iv~~~~~~~~~~~~~v~g~~v~~~~~ 259 (378)
-+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+..... ..++.+++..... +
T Consensus 602 D~lr~~~~~~I~~l~~~Gi~v~miTG---D~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~--------------~ 664 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAGIRVIMITG---DNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLP--------------L 664 (995)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSC--------------H
T ss_pred CCCchhHHHHHHHHHHcCCEEEEECC---CCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCC--------------H
Confidence 35899999999999999999999999 55788999999999965431 1133333321100 0
Q ss_pred hhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCC
Q 017067 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 260 ~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 339 (378)
.+..++.++.. -+..-.|+.+..+ .+.+.-..+.++|+||+.||+.|.++|++
T Consensus 665 ------------~~~~~~~~~~~-------v~~r~~P~~K~~~-------v~~l~~~g~~v~~~GDG~ND~~alk~Adv- 717 (995)
T 3ar4_A 665 ------------AEQREACRRAC-------CFARVEPSHKSKI-------VEYLQSYDEITAMTGDGVNDAPALKKAEI- 717 (995)
T ss_dssp ------------HHHHHHHHHCC-------EEESCCSSHHHHH-------HHHHHTTTCCEEEEECSGGGHHHHHHSTE-
T ss_pred ------------HHHHHHHhhCc-------EEEEeCHHHHHHH-------HHHHHHCCCEEEEEcCCchhHHHHHHCCe-
Confidence 00111111000 0001113333333 22222224789999999999999999995
Q ss_pred EEEEcCCCCCCCCCCCCcEEec--CCCcchH
Q 017067 340 CVVMRSSLTSRAEFPSANAVMD--GFGGADL 368 (378)
Q Consensus 340 ~i~v~~~~~~~~~l~~ad~vi~--~l~e~~~ 368 (378)
++..+...+.....||+|+. ++..+..
T Consensus 718 --giamg~g~~~ak~aAd~vl~~~~~~~i~~ 746 (995)
T 3ar4_A 718 --GIAMGSGTAVAKTASEMVLADDNFSTIVA 746 (995)
T ss_dssp --EEEETTSCHHHHHTCSEEETTCCHHHHHH
T ss_pred --EEEeCCCCHHHHHhCCEEECCCCHHHHHH
Confidence 44334333333456899994 4665543
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00022 Score=68.97 Aligned_cols=38 Identities=18% Similarity=0.372 Sum_probs=34.0
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 224 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~l 224 (378)
.++|++.++|+.|+++|+.++|||+ +...+++.+.+.+
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSa---s~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISA---AHEELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHTCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHhhc
Confidence 4799999999999999999999999 5678888888764
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.77 E-value=4.3e-05 Score=83.42 Aligned_cols=134 Identities=17% Similarity=0.124 Sum_probs=80.8
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc-hh--eeechh-hHHHhhhhccccccccccCcc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KI--KIVGNE-EVERSLYGQFVLGKGISSGVD 259 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f-~~--~iv~~~-~~~~~~~~~~v~g~~v~~~~~ 259 (378)
+++|++.+.|++|+++|+++.++|+ .....+..+.+.+|+.... +. .+++++ ......+...+....+..
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTG---D~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~a--- 608 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTG---DAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFA--- 608 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEES---SCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEE---
T ss_pred cccccHHHHHHHHhhcCceEEEEcC---CCHHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEE---
Confidence 5899999999999999999999999 5578899999999996321 10 011110 000000111111111111
Q ss_pred hhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCC
Q 017067 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 260 ~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 339 (378)
.-.|+.+-.+ -..+++.| +.+.|+||+.||..|.++|+
T Consensus 609 ---------------------------------rv~P~~K~~i----V~~Lq~~g---~~Vam~GDGvNDapaLk~Ad-- 646 (920)
T 1mhs_A 609 ---------------------------------EVFPQHKYNV----VEILQQRG---YLVAMTGDGVNDAPSLKKAD-- 646 (920)
T ss_dssp ---------------------------------SCCSTHHHHH----HHHHHTTT---CCCEECCCCGGGHHHHHHSS--
T ss_pred ---------------------------------EeCHHHHHHH----HHHHHhCC---CeEEEEcCCcccHHHHHhCC--
Confidence 0113333333 22334444 68999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCcEEec--CCCcc
Q 017067 340 CVVMRSSLTSRAEFPSANAVMD--GFGGA 366 (378)
Q Consensus 340 ~i~v~~~~~~~~~l~~ad~vi~--~l~e~ 366 (378)
|++..+...+...+.||+|+. ++..+
T Consensus 647 -vGIAmg~gtd~ak~aADiVl~~~~~~~I 674 (920)
T 1mhs_A 647 -TGIAVEGSSDAARSAADIVFLAPGLGAI 674 (920)
T ss_dssp -EEEEETTSCHHHHHSSSEEESSCCSHHH
T ss_pred -cCcccccccHHHHHhcCeEEcCCCHHHH
Confidence 555445444444456899984 45444
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00013 Score=80.87 Aligned_cols=41 Identities=27% Similarity=0.413 Sum_probs=37.5
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~ 227 (378)
+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+.
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTG---D~~~tA~~ia~~lgi~ 639 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKGVGII 639 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTSS
T ss_pred CCChhHHHHHHHHHHcCCEEEEECC---CCHHHHHHHHHHcCCC
Confidence 5799999999999999999999999 5578889999999986
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0002 Score=79.27 Aligned_cols=154 Identities=13% Similarity=0.100 Sum_probs=83.8
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeech-hhH--------HHhhhhccccccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN-EEV--------ERSLYGQFVLGKG 253 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~-~~~--------~~~~~~~~v~g~~ 253 (378)
-+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+...-...+... +.. ....+...+.|..
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTG---d~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 679 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTG---DHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQ 679 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHh
Confidence 36899999999999999999999999 55688889999999853211000000 000 0000000111111
Q ss_pred cccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHH
Q 017067 254 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 333 (378)
Q Consensus 254 v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA 333 (378)
...-.++. +.+ +... .+..-+..-.|+....+ -..+++.| ..++++||+.||+.|.
T Consensus 680 l~~~~~~~---------------l~~-~~~~-~~~~v~ar~~P~~K~~i----v~~lq~~g---~~V~a~GDG~ND~~mL 735 (1034)
T 3ixz_A 680 LKDMDPSE---------------LVE-ALRT-HPEMVFARTSPQQKLVI----VESCQRLG---AIVAVTGDGVNDSPAL 735 (1034)
T ss_pred hhhCCHHH---------------HHH-HHHh-CCceEEEecCHHHHHHH----HHHHHHcC---CEEEEECCcHHhHHHH
Confidence 11000000 000 0000 00001111123333333 23344444 5599999999999999
Q ss_pred HHcCCCEEEEcCC-CCCCCCCCCCcEEecCCCcc
Q 017067 334 QRIGMPCVVMRSS-LTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 334 ~~aG~~~i~v~~~-~~~~~~l~~ad~vi~~l~e~ 366 (378)
+.|| ++|..+ ...+...+.||+|+.+....
T Consensus 736 k~A~---vGIAMg~ng~d~aK~aAD~Vl~~~~~~ 766 (1034)
T 3ixz_A 736 KKAD---IGVAMGIAGSDAAKNAADMILLDDNFA 766 (1034)
T ss_pred HHCC---eeEEeCCccCHHHHHhcCEEeccCCch
Confidence 9999 666666 34444455689999776554
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00014 Score=79.14 Aligned_cols=42 Identities=21% Similarity=0.324 Sum_probs=37.8
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
+++|++.+.|++|+++|+++.++|+ .....+..+.+.+|+..
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTG---D~~~tA~~iA~~lGi~~ 529 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMGT 529 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEES---SCHHHHTHHHHTTTCTT
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcC---CChHHHHHHHHHhCCcc
Confidence 5799999999999999999999999 55788889999999953
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00056 Score=58.15 Aligned_cols=43 Identities=16% Similarity=-0.069 Sum_probs=30.9
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~ 227 (378)
+.|++.+.|+.|+++|+.++|+|+.+......+...++.+|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 3467899999999999999999994311124455566677764
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00011 Score=67.32 Aligned_cols=58 Identities=9% Similarity=0.009 Sum_probs=45.0
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC--------CCcEEecCCCcch
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP--------SANAVMDGFGGAD 367 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~--------~ad~vi~~l~e~~ 367 (378)
++.+++++|++++++++|||+.||+.|++.+|+. |.+.+ .. +++. .|++|+++..+-+
T Consensus 167 l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~-va~~n--a~-~~~k~~a~~~~~~a~~v~~~~~~dG 232 (244)
T 1s2o_A 167 TQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARG-VIVRN--AQ-PELLHWYDQWGDSRHYRAQSSHAGA 232 (244)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEE-EECTT--CC-HHHHHHHHHHCCTTEEECSSCHHHH
T ss_pred HHHHHHHhCCCHHHEEEECCchhhHHHHhccCcE-EEEcC--Cc-HHHHHHHhcccccceeecCCcchhH
Confidence 8889999999999999999999999999999974 44433 22 2222 2789998877643
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00011 Score=67.60 Aligned_cols=58 Identities=5% Similarity=-0.054 Sum_probs=42.7
Q ss_pred HHHHHHHHcCC-CCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC-CCcEEecCCCc
Q 017067 305 ALRAGAEYAEK-PVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP-SANAVMDGFGG 365 (378)
Q Consensus 305 a~~~a~~~lgv-~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~-~ad~vi~~l~e 365 (378)
+++..++++|+ +++++++|||+.||+.|.+.+|+. |.+.++ ...++. .|++|+++..+
T Consensus 183 al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~-va~gna--~~~~~~~~a~~v~~~~~~ 242 (249)
T 2zos_A 183 AAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKV-FIVGSL--KHKKAQNVSSIIDVLEVI 242 (249)
T ss_dssp HHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEE-EEESSC--CCTTEEEESSHHHHHHHH
T ss_pred HHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcE-EEeCCC--CccccchhceEEeccccc
Confidence 38888999998 999999999999999999999974 444433 322222 36777665443
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0013 Score=66.33 Aligned_cols=127 Identities=7% Similarity=0.005 Sum_probs=78.6
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH-h--------CccccchheeechhhHHHhhhhccccccccc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-L--------GSERISKIKIVGNEEVERSLYGQFVLGKGIS 255 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~-l--------gi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~ 255 (378)
.-|.+..+|+.|+++|-++-++||+. -.++..++.. + .|.++||++|+.+.- .+.|+.-...-.+.
T Consensus 187 k~~~l~~~L~~lr~~GKklFLiTNS~---~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~K--P~FF~~~~~~~~v~ 261 (470)
T 4g63_A 187 REKEVVEGLKHFIRYGKKIFILTNSE---YSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANK--PRFFYDNLRFLSVN 261 (470)
T ss_dssp CCHHHHHHHHHHHTTTCEEEEECSSC---HHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCT--THHHHSCCCEEEEC
T ss_pred CCHhHHHHHHHHHHcCCeEEEeeCCC---chHHHHHHHhhcccCCCCCCChhhhcCEEEECCCC--CCcccCCCcceEEE
Confidence 46889999999999999999999954 5777777775 3 478999996665532 12343211110010
Q ss_pred cCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcch-hHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHH
Q 017067 256 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPES-LDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGA 333 (378)
Q Consensus 256 ~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~-~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA 333 (378)
...+ .+. +.. ...+ ++. ..+- .....+.+|..-.++++|||+. .||..+
T Consensus 262 ~~~g-~l~----------------------~~~-~~~~--~~vY~gGn---~~~l~~llg~~g~~VLY~GDhi~~Di~~~ 312 (470)
T 4g63_A 262 PENG-TMT----------------------NVH-GPIV--PGVYQGGN---AKKFTEDLGVGGDEILYIGDHIYGDILRL 312 (470)
T ss_dssp TTTC-CEE----------------------ECC-SSCC--SEEEEECC---HHHHHHHTTCCGGGEEEEESCCCSCHHHH
T ss_pred CCCC-ccc----------------------ccc-cccC--CceeecCc---HHHHHHHhCCCCCeEEEECCchHHHHHhh
Confidence 0000 000 000 0000 000 0011 5666788899999999999997 698777
Q ss_pred HH-cCCCEEEEcC
Q 017067 334 QR-IGMPCVVMRS 345 (378)
Q Consensus 334 ~~-aG~~~i~v~~ 345 (378)
+. .||+|+.|-.
T Consensus 313 kk~~gWrT~~Ii~ 325 (470)
T 4g63_A 313 KKDCNWRTALVVE 325 (470)
T ss_dssp HHSCCCEEEEECT
T ss_pred hhccCCeEEEEhH
Confidence 64 6999998753
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=96.97 E-value=9.8e-05 Score=66.69 Aligned_cols=92 Identities=12% Similarity=0.173 Sum_probs=69.4
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc-cchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~-~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
..+||+.++|+.+. +++.++|.|++ ....+..+++.+++.. +|...++..++... .|
T Consensus 59 ~~RPgl~eFL~~l~-~~yeivI~Tas---~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~~-------~g----------- 116 (204)
T 3qle_A 59 AKRPGADYFLGYLS-QYYEIVLFSSN---YMMYSDKIAEKLDPIHAFVSYNLFKEHCVYK-------DG----------- 116 (204)
T ss_dssp EECTTHHHHHHHHT-TTEEEEEECSS---CHHHHHHHHHHTSTTCSSEEEEECGGGSEEE-------TT-----------
T ss_pred EeCCCHHHHHHHHH-hCCEEEEEcCC---cHHHHHHHHHHhCCCCCeEEEEEEecceeEE-------CC-----------
Confidence 48999999999998 67999999994 4799999999999974 77764432222100 00
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCC
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 339 (378)
. |...++.+|.++++||+|+|+...+......|+.
T Consensus 117 ----------------------------~--------------y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~ 151 (204)
T 3qle_A 117 ----------------------------V--------------HIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIP 151 (204)
T ss_dssp ----------------------------E--------------EECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEE
T ss_pred ----------------------------e--------------eeecHHHhCCChHHEEEEECCHHHHhhCccCceE
Confidence 0 3344788899999999999999888776667743
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00014 Score=67.90 Aligned_cols=60 Identities=7% Similarity=-0.044 Sum_probs=36.8
Q ss_pred HHHHHHHHcC-CCCCc--EEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC---CCc-EEecCCCc
Q 017067 305 ALRAGAEYAE-KPVRN--CFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP---SAN-AVMDGFGG 365 (378)
Q Consensus 305 a~~~a~~~lg-v~p~~--~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~---~ad-~vi~~l~e 365 (378)
+++.+++++| +++++ +++|||+.||+.|++.+|+. |.+.++....+++. .|+ +|+++..+
T Consensus 193 ~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~~~~~~~~~~~~a~~~v~~~~~~ 259 (275)
T 1xvi_A 193 AANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGLNREGVHLHDEDPARVWRTQREGP 259 (275)
T ss_dssp HHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCCC----------------------
T ss_pred HHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecCCCccchhhccccCCceeEccCCCc
Confidence 3888899999 99999 99999999999999999974 66666543334443 367 88876655
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0029 Score=58.86 Aligned_cols=36 Identities=11% Similarity=0.227 Sum_probs=28.4
Q ss_pred HHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 190 EDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 190 ~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
.+.|++|+++|++++++|+ +....+..+++.+++..
T Consensus 32 ~~~l~~l~~~G~~~~iaTG---R~~~~~~~~~~~l~~~~ 67 (275)
T 1xvi_A 32 APWLTRLREANVPVILCSS---KTSAEMLYLQKTLGLQG 67 (275)
T ss_dssp HHHHHHHHHTTCCEEEECS---SCHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCCC
Confidence 4577888889999999999 44577778888888754
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0015 Score=64.26 Aligned_cols=52 Identities=17% Similarity=0.305 Sum_probs=44.2
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc-cchheeechh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNE 238 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~-~f~~~iv~~~ 238 (378)
+..+||+.++|+.+. +++.++|.|++ ....+..+++.+++.. +|...+++.+
T Consensus 74 v~~RPg~~eFL~~l~-~~yeivI~Tas---~~~yA~~vl~~LDp~~~~f~~ri~sr~ 126 (372)
T 3ef0_A 74 IKFRPGLAQFLQKIS-ELYELHIYTMG---TKAYAKEVAKIIDPTGKLFQDRVLSRD 126 (372)
T ss_dssp EEECTTHHHHHHHHH-TTEEEEEECSS---CHHHHHHHHHHHCTTSCSSSSCEECTT
T ss_pred EEECcCHHHHHHHHh-cCcEEEEEeCC---cHHHHHHHHHHhccCCceeeeEEEEec
Confidence 568999999999999 67999999994 4799999999999987 7876566543
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=96.04 E-value=0.0081 Score=54.59 Aligned_cols=60 Identities=12% Similarity=0.001 Sum_probs=43.7
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHc--CCCEEEEcCCCCCCCCCCCCcEEecC---CCcchHHHHHHhhc
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI--GMPCVVMRSSLTSRAEFPSANAVMDG---FGGADLTISKLRHS 376 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~a--G~~~i~v~~~~~~~~~l~~ad~vi~~---l~e~~~~~~~l~~~ 376 (378)
+++..++++| +++|||+.||+.|.+.+ |..+++ .+. ...|++|+.+ -.++...+.++...
T Consensus 164 al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam-~Na------~~~A~~v~~~~~~~~gV~~~l~~~~~~ 228 (239)
T 1u02_A 164 AIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKV-GEG------ETHAKFHVADYIEMRKILKFIEMLGVQ 228 (239)
T ss_dssp HHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEE-SSS------CCCCSEEESSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEE-CCC------CCcceEEeCCCCCHHHHHHHHHHHHHh
Confidence 4888899998 99999999999999999 844333 322 2458999988 44455556665543
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=95.48 E-value=0.014 Score=53.14 Aligned_cols=35 Identities=11% Similarity=0.172 Sum_probs=26.0
Q ss_pred HHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 191 DFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 191 ~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
+.|++|+++|++++++|+ +....+..+++.+++..
T Consensus 24 ~~l~~l~~~g~~~~i~Tg---r~~~~~~~~~~~~~~~~ 58 (249)
T 2zos_A 24 PIIEELKDMGFEIIFNSS---KTRAEQEYYRKELEVET 58 (249)
T ss_dssp HHHHHHHHTTEEEEEBCS---SCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCCCc
Confidence 466778888999999998 34566777778887753
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=94.80 E-value=0.061 Score=43.09 Aligned_cols=41 Identities=20% Similarity=0.050 Sum_probs=25.9
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc
Q 017067 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (378)
Q Consensus 186 ~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f 230 (378)
..+-..-+..+++.|++.+.++. .......+.+.+|+..+|
T Consensus 97 vgD~~~di~~a~~~G~~~i~~~~----~~~~~~~l~~~~~~~~~f 137 (137)
T 2pr7_A 97 VDDSILNVRGAVEAGLVGVYYQQ----FDRAVVEIVGLFGLEGEF 137 (137)
T ss_dssp EESCHHHHHHHHHHTCEEEECSC----HHHHHHHHHHHHTCCSCC
T ss_pred EcCCHHHHHHHHHCCCEEEEeCC----hHHHHHHHHHHhCCccCC
Confidence 34444457888888987666654 234555667777776654
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=94.75 E-value=0.0015 Score=60.21 Aligned_cols=54 Identities=4% Similarity=-0.100 Sum_probs=37.6
Q ss_pred HHHHHHHcCCCCCcEEEEeC----CHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCC
Q 017067 306 LRAGAEYAEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFG 364 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGD----s~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~ 364 (378)
++.. +|++++++++||| +.||+.|.+.+|+..+.+.+. ...-...|++|+++..
T Consensus 202 l~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA--~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 202 LDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSP--QDTVQRCREIFFPETA 259 (262)
T ss_dssp HHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSH--HHHHHHHHHHHCTTC-
T ss_pred HHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCC--CHHHHHhhheeCCCCc
Confidence 4544 8999999999999 999999999999766776432 2111122566655443
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=94.44 E-value=0.018 Score=52.14 Aligned_cols=33 Identities=0% Similarity=-0.072 Sum_probs=26.6
Q ss_pred cCCCCCcEEEEeC----CHhHHHHHHHcCCCEEEEcC
Q 017067 313 AEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 345 (378)
Q Consensus 313 lgv~p~~~i~VGD----s~~Di~aA~~aG~~~i~v~~ 345 (378)
+|++++++++||| +.||+.|.+.+|...+.+.+
T Consensus 197 ~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~N 233 (246)
T 2amy_A 197 ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 233 (246)
T ss_dssp TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeC
Confidence 8999999999999 99999999999865555544
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=94.35 E-value=0.13 Score=47.12 Aligned_cols=53 Identities=21% Similarity=0.240 Sum_probs=40.5
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc-ccchheeechh
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGNE 238 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~-~~f~~~iv~~~ 238 (378)
+.|++.+.|+.++++|++++++||.+..........++.+|+. ..++. +++..
T Consensus 31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~-ii~~~ 84 (284)
T 2hx1_A 31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADK-IISSG 84 (284)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGG-EEEHH
T ss_pred eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhh-EEcHH
Confidence 4578899999999999999999984434456677888899997 66655 44443
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=94.23 E-value=0.02 Score=46.88 Aligned_cols=17 Identities=24% Similarity=0.440 Sum_probs=14.6
Q ss_pred ccEEEEecccccccccc
Q 017067 84 DLAVLLEVDGVLVDAYR 100 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~ 100 (378)
+|+|+||+||||++...
T Consensus 1 ik~i~~DlDGTL~~~~~ 17 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANT 17 (126)
T ss_dssp CCEEEECSTTTTBCCCC
T ss_pred CCEEEEecCCCCCCCCC
Confidence 47899999999998754
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=94.01 E-value=0.023 Score=51.97 Aligned_cols=31 Identities=3% Similarity=-0.160 Sum_probs=26.3
Q ss_pred CCCcEEEEeCC----HhHHHHHHHcCCCEEEEcCC
Q 017067 316 PVRNCFLIAGS----QSGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 316 ~p~~~i~VGDs----~~Di~aA~~aG~~~i~v~~~ 346 (378)
+++++++|||+ .||+.|.+.+|.-.+.|.++
T Consensus 198 ~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~ 232 (246)
T 3f9r_A 198 DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSY 232 (246)
T ss_dssp TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSH
T ss_pred CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCH
Confidence 89999999995 99999999888666766544
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=93.46 E-value=0.031 Score=55.87 Aligned_cols=52 Identities=17% Similarity=0.333 Sum_probs=44.1
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc-cchheeechh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNE 238 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~-~f~~~iv~~~ 238 (378)
+..+||+.+||+.+. +.|.++|.|. +....+..+++.+++.. +|...+++.+
T Consensus 82 V~~RPgl~eFL~~ls-~~yEivIfTa---s~~~YA~~Vl~~LDp~~~~f~~Rl~sRd 134 (442)
T 3ef1_A 82 IKFRPGLAQFLQKIS-ELYELHIYTM---GTKAYAKEVAKIIDPTGKLFQDRVLSRD 134 (442)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECS---SCHHHHHHHHHHHCTTSTTTTTCEECTT
T ss_pred EEeCCCHHHHHHHHh-CCcEEEEEcC---CCHHHHHHHHHHhccCCccccceEEEec
Confidence 568999999999998 5699999999 45799999999999987 6877666543
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=92.85 E-value=0.43 Score=43.21 Aligned_cols=47 Identities=28% Similarity=0.438 Sum_probs=33.8
Q ss_pred CCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchh
Q 017067 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232 (378)
Q Consensus 186 ~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~ 232 (378)
.|++.++|+.++++|++++++||.+..........++.+|+....+.
T Consensus 19 ~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~ 65 (263)
T 1zjj_A 19 IPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSI 65 (263)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGG
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhh
Confidence 47889999999999999999999653333444455556787644444
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=92.09 E-value=0.033 Score=53.46 Aligned_cols=42 Identities=21% Similarity=0.404 Sum_probs=36.9
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f 230 (378)
.+||+.+||+.+.+ .|.++|.|++ ....+..+++.+++...+
T Consensus 165 ~RP~l~eFL~~l~~-~yeivIfTas---~~~ya~~vld~Ld~~~~~ 206 (320)
T 3shq_A 165 MRPYLHEFLTSAYE-DYDIVIWSAT---SMRWIEEKMRLLGVASND 206 (320)
T ss_dssp BCTTHHHHHHHHHH-HEEEEEECSS---CHHHHHHHHHHTTCTTCS
T ss_pred eCCCHHHHHHHHHh-CCEEEEEcCC---cHHHHHHHHHHhCCCCCc
Confidence 79999999999995 5999999994 479999999999987653
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=91.68 E-value=0.019 Score=51.93 Aligned_cols=32 Identities=25% Similarity=0.341 Sum_probs=21.9
Q ss_pred CCCccEEEEecccccccccccchHHHHHHHHHH
Q 017067 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQK 113 (378)
Q Consensus 81 ~~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~ 113 (378)
++++|+|+||+||||++.... ......+++++
T Consensus 3 ~~~~kli~~DlDGTLl~~~~~-i~~~~~~al~~ 34 (246)
T 2amy_A 3 APGPALCLFDVDGTLTAPRQK-ITKEMDDFLQK 34 (246)
T ss_dssp -CCSEEEEEESBTTTBCTTSC-CCHHHHHHHHH
T ss_pred CCCceEEEEECCCCcCCCCcc-cCHHHHHHHHH
Confidence 467899999999999987643 33344455544
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=91.67 E-value=0.078 Score=48.53 Aligned_cols=31 Identities=29% Similarity=0.350 Sum_probs=20.8
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHc
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKL 114 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~ 114 (378)
++|+|+||+||||++.... ......++++++
T Consensus 12 ~~kli~~DlDGTLl~~~~~-is~~~~~al~~l 42 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPARQK-IDPEVAAFLQKL 42 (262)
T ss_dssp -CEEEEEESBTTTBSTTSC-CCHHHHHHHHHH
T ss_pred CeEEEEEeCccCCCCCCCc-CCHHHHHHHHHH
Confidence 5789999999999997653 333344555443
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=89.59 E-value=2.8 Score=38.59 Aligned_cols=41 Identities=12% Similarity=0.090 Sum_probs=35.2
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCC
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (378)
+|++..+++| +.-.-++|||+.---++|+..+|+.+-+..-
T Consensus 219 CFerI~~RFG-~k~~yvvIGDG~eEe~AAk~~n~PFwrI~~h 259 (274)
T 3geb_A 219 CFERIMQRFG-RKAVYVVIGDGVEEEQGAKKHNMPFWRISCH 259 (274)
T ss_dssp HHHHHHHHHC-TTSEEEEEESSHHHHHHHHHTTCCEEECCSH
T ss_pred HHHHHHHHhC-CCceEEEECCCHHHHHHHHHcCCCeEEeecC
Confidence 4999999998 4567778999999999999999999987643
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=88.09 E-value=0.22 Score=44.82 Aligned_cols=14 Identities=36% Similarity=0.534 Sum_probs=12.3
Q ss_pred ccEEEEeccccccc
Q 017067 84 DLAVLLEVDGVLVD 97 (378)
Q Consensus 84 ~kaviFDlDGTLid 97 (378)
+++|+||+||||++
T Consensus 1 ikli~~DlDGTLl~ 14 (239)
T 1u02_A 1 MSLIFLDYDGTLVP 14 (239)
T ss_dssp -CEEEEECBTTTBC
T ss_pred CeEEEEecCCCCcC
Confidence 47899999999998
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=87.06 E-value=0.062 Score=49.07 Aligned_cols=36 Identities=17% Similarity=0.301 Sum_probs=23.7
Q ss_pred CCccEEEEecccccccccccchHHHHHHHH---HHcCCCC
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAF---QKLGLDC 118 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~---~~~gl~~ 118 (378)
|.+|+|+||+||||++.... ......+++ .+.|+..
T Consensus 2 M~~kli~~DlDGTLl~~~~~-i~~~~~~~l~~l~~~g~~~ 40 (246)
T 3f9r_A 2 MKRVLLLFDVDGTLTPPRLC-QTDEMRALIKRARGAGFCV 40 (246)
T ss_dssp CCSEEEEECSBTTTBSTTSC-CCHHHHHHHHHHHHTTCEE
T ss_pred CCceEEEEeCcCCcCCCCCc-cCHHHHHHHHHHHHCCCEE
Confidence 46899999999999997643 223333333 3456654
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=86.64 E-value=1 Score=40.52 Aligned_cols=45 Identities=11% Similarity=0.201 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchh
Q 017067 188 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232 (378)
Q Consensus 188 gv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~ 232 (378)
++.+.|++|+++|++++++||.+......+...++.+|+....+.
T Consensus 26 ~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ 70 (266)
T 3pdw_A 26 EACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQ 70 (266)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGG
T ss_pred cHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHH
Confidence 467899999999999999999554455667788888998755544
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=84.95 E-value=3 Score=36.64 Aligned_cols=32 Identities=13% Similarity=0.193 Sum_probs=25.8
Q ss_pred HHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCC
Q 017067 310 AEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 310 ~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (378)
++.-|++ ++|||+.. ...|++.|++++.+.++
T Consensus 138 l~~~G~~----vvVG~~~~-~~~A~~~Gl~~vli~sg 169 (196)
T 2q5c_A 138 VKTENIK----IVVSGKTV-TDEAIKQGLYGETINSG 169 (196)
T ss_dssp HHHTTCC----EEEECHHH-HHHHHHTTCEEEECCCC
T ss_pred HHHCCCe----EEECCHHH-HHHHHHcCCcEEEEecC
Confidence 4556665 58998765 78899999999999886
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=84.95 E-value=0.5 Score=42.54 Aligned_cols=27 Identities=11% Similarity=0.171 Sum_probs=18.2
Q ss_pred cEEEEecccccccccccchHHHHHHHHHH
Q 017067 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQK 113 (378)
Q Consensus 85 kaviFDlDGTLid~~~~~~~~a~~~~~~~ 113 (378)
.+|+||+||||++.... .....+++++
T Consensus 4 ~li~~DlDGTLl~~~~~--~~~~~~~l~~ 30 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQQA--LEHLQEYLGD 30 (244)
T ss_dssp EEEEECTBTTTBSCHHH--HHHHHHHHHT
T ss_pred eEEEEeCCCCCcCCHHH--HHHHHHHHHH
Confidence 38999999999997642 2344445543
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=80.44 E-value=3.2 Score=38.27 Aligned_cols=43 Identities=12% Similarity=0.218 Sum_probs=34.8
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~ 227 (378)
+.|++.+.|+.|+++|++++++||.+..........++.+|+.
T Consensus 38 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 38 AVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 4578899999999999999999985434456666778888886
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 378 | ||||
| d1swva_ | 257 | c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba | 2e-05 | |
| d2bdua1 | 291 | c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III | 5e-05 | |
| d1cr6a1 | 222 | c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal | 0.003 |
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Score = 43.6 bits (101), Expect = 2e-05
Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 5/110 (4%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR-MLVLF 144
AV+ G VD F + F F K G+ TA + D R + +
Sbjct: 4 AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVA---ITAEEARKPMGLLKIDHVRALTEMP 60
Query: 145 FNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVD 194
W +A ++ + +E + L L + A GV++ +
Sbjct: 61 RIASEWNRVFRQLPTEADIQEMYEEFEEILFAILP-RYASPINGVKEVIA 109
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Score = 42.2 bits (99), Expect = 5e-05
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 170 KKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229
K L E +A D L+ G E+F GIP+ + +A + V+ + G
Sbjct: 121 PKAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQAGVYH- 176
Query: 230 SKIKIVGNE 238
S +K+V N
Sbjct: 177 SNVKVVSNF 185
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 36.3 bits (82), Expect = 0.003
Identities = 19/141 (13%), Positives = 35/141 (24%), Gaps = 4/141 (2%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
++DGVL AF + + L L T+ + + F
Sbjct: 2 VAAFDLDGVLALPSIA---GAFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFS 58
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPL-I 204
+ KA N+ + + A + + +G I
Sbjct: 59 QWVPLMDESYRKSSKACGANLPENFSISQIFSQAMAARSINRPMLQAAIALKKKGFTTCI 118
Query: 205 VLTAYGKSGDRIARSVVEKLG 225
V + GD+
Sbjct: 119 VTNNWLDDGDKRDSLAQMMCE 139
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 378 | |||
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.97 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.96 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.96 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.95 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.95 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.94 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.94 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.94 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.94 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.93 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.92 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.92 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.91 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.9 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.9 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.85 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.85 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.84 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.81 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.81 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.76 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.75 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.75 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.75 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.74 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.74 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.72 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.71 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.71 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.68 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.65 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.4 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.3 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.15 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.94 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.9 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.78 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 98.78 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.71 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.67 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.66 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.58 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.47 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.46 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.36 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.22 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.2 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.12 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 98.09 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 97.71 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 97.18 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 97.07 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 95.67 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 95.0 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 93.21 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 92.75 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 92.44 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 91.8 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 91.21 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 90.45 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 90.08 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 89.73 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 87.73 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 84.7 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 82.9 | |
| d2pjua1 | 186 | Propionate catabolism operon regulatory protein Pr | 82.74 |
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=1.5e-30 Score=233.75 Aligned_cols=214 Identities=18% Similarity=0.235 Sum_probs=159.0
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
+++|||||+||||+|+... +..+++++++++|++ ++... .+....+.........+.....+....
T Consensus 2 ~i~a~iFD~DGTL~dt~~~-~~~a~~~~~~~~g~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 67 (218)
T d1te2a_ 2 QILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVD---ISRRN--ELPDTLGLRIDMVVDLWYARQPWNGPS-------- 67 (218)
T ss_dssp CCCEEEECCBTTTBCCHHH-HHHHHHHHHHHTTCC---GGGGG--GSCCCTTCCHHHHHHHHHHHSCCSSSC--------
T ss_pred cceEEEECCCCcccCCHHH-HHHHHHHHHHHcCCC---CCHHH--HHHHHhCCCccchhhhhhhcccccchh--------
Confidence 6899999999999999886 789999999999987 33221 222222222333444455555554332
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
...+.+...+.+.+.+ ....+++||+.++|+.|+++|++++|+|| +....+..+++.+|+.++|+. +++.+++..
T Consensus 68 ~~~~~~~~~~~~~~~~-~~~~~~~pg~~~~l~~L~~~g~~~~i~T~---~~~~~~~~~l~~~~l~~~F~~-i~~~~~~~~ 142 (218)
T d1te2a_ 68 RQEVVERVIARAISLV-EETRPLLPGVREAVALCKEQGLLVGLASA---SPLHMLEKVLTMFDLRDSFDA-LASAEKLPY 142 (218)
T ss_dssp HHHHHHHHHHHHHHHH-HHHCCBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCGGGCSE-EEECTTSSC
T ss_pred HHHHHHHHHHHHHHhh-hccccccchHHHHHHHhhhcccccccccc---ccccccccccccccccccccc-ccccccccc
Confidence 2233333444444433 22356899999999999999999999999 557889999999999999998 455544422
Q ss_pred hhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017067 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (378)
Q Consensus 243 ~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~ 322 (378)
.||+|++ |+.+++++|++|++|+|
T Consensus 143 ------------------------------------------~Kp~~~~--------------~~~~~~~l~~~~~~~l~ 166 (218)
T d1te2a_ 143 ------------------------------------------SKPHPQV--------------YLDCAAKLGVDPLTCVA 166 (218)
T ss_dssp ------------------------------------------CTTSTHH--------------HHHHHHHHTSCGGGEEE
T ss_pred ------------------------------------------chhhHHH--------------HHHHHHHcCCCchhcEE
Confidence 2666666 99999999999999999
Q ss_pred EeCCHhHHHHHHHcCCCEEEEcCCCCCCC-CCCCCcEEecCCCcchHHHHHH
Q 017067 323 IAGSQSGVAGAQRIGMPCVVMRSSLTSRA-EFPSANAVMDGFGGADLTISKL 373 (378)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~~~~~~~-~l~~ad~vi~~l~e~~~~~~~l 373 (378)
|||+.+||.+|+++||++|+|..+..... ....||+++++|.|+ ++..|
T Consensus 167 igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el--~~~~l 216 (218)
T d1te2a_ 167 LEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL--TAKDL 216 (218)
T ss_dssp EESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGC--CHHHH
T ss_pred EeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhC--CHhhc
Confidence 99999999999999999999987765443 345689999999998 34444
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.96 E-value=1.4e-29 Score=226.46 Aligned_cols=204 Identities=11% Similarity=0.122 Sum_probs=156.2
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
|++|+|+||+||||+|+... +..+|++++.++|++ +....+...+. +.... ...+.+... .+
T Consensus 1 M~~k~viFD~DGTL~ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~---~~~~~----~~~~~~~~~----~~--- 62 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPA-YTTVMREVLATYGKP---FSPAQAQKTFP---MAAEQ----AMTELGIAA----SE--- 62 (207)
T ss_dssp CCCSEEEECSBTTTEECHHH-HHHHHHHHHHTTTCC---CCHHHHHHHTT---SCHHH----HHHHTTCCG----GG---
T ss_pred CCCcEEEEeCCCCcCcCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHhc---chhhh----hhhccccch----hh---
Confidence 57899999999999999886 889999999999997 45554444432 22222 223343321 22
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
.+.+...+.+.+.+.. ...+++||+.++|+.|++ +++++|+|| +....+..+++++|+.++|+. +++.++..
T Consensus 63 -~~~~~~~~~~~~~~~~--~~~~~~~g~~~~L~~l~~-~~~~~ivT~---~~~~~~~~~l~~~~l~~~f~~-i~~~~~~~ 134 (207)
T d2hdoa1 63 -FDHFQAQYEDVMASHY--DQIELYPGITSLFEQLPS-ELRLGIVTS---QRRNELESGMRSYPFMMRMAV-TISADDTP 134 (207)
T ss_dssp -HHHHHHHHHHHHTTCG--GGCEECTTHHHHHHHSCT-TSEEEEECS---SCHHHHHHHHTTSGGGGGEEE-EECGGGSS
T ss_pred -HHHHHHHhhhhhcccc--cccccccchhhhhhhhcc-ccccccccc---ccccccccccccccccccccc-cccccccc
Confidence 1233333333333322 146799999999999975 699999999 557999999999999999987 45554432
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. +||+|++ |+.+++++|++|++|+
T Consensus 135 ~------------------------------------------~KP~p~~--------------~~~~~~~~~~~~~~~l 158 (207)
T d2hdoa1 135 K------------------------------------------RKPDPLP--------------LLTALEKVNVAPQNAL 158 (207)
T ss_dssp C------------------------------------------CTTSSHH--------------HHHHHHHTTCCGGGEE
T ss_pred c------------------------------------------chhhhhh--------------hcccccceeeecccee
Confidence 1 2666666 9999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
||||+.+|+++|+++||.+|++.++.....+...++++++++.|+-
T Consensus 159 ~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dll 204 (207)
T d2hdoa1 159 FIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDIL 204 (207)
T ss_dssp EEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGG
T ss_pred EecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHHH
Confidence 9999999999999999999999999888888888999999998873
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.96 E-value=1.3e-28 Score=226.94 Aligned_cols=223 Identities=15% Similarity=0.082 Sum_probs=159.4
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccC-------ChHHHHHHHHHHcCCCCCCC
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG-------DEDRMLVLFFNRIGWPTSVP 155 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~g~~~~l~ 155 (378)
++|+||||+||||+|+.......+|.+++.++|++ ++.+.+...++.... ........+...++...
T Consensus 1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 74 (257)
T d1swva_ 1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVA---ITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLP--- 74 (257)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCC---CCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCC---
T ss_pred CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCC---CCHHHHHHHhCCcHHHHHHHHhhhhhhhHHHHHHhcccC---
Confidence 47899999999999988764578999999999987 454433222110000 00011111222222211
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheee
Q 017067 156 TNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIV 235 (378)
Q Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv 235 (378)
. ...++.+.....+.+.+.+ .....++||+.++|+.|+++|++++|+|| +....++.+++.+|+.++|...++
T Consensus 75 ~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn---~~~~~~~~~l~~~~l~~~f~d~~~ 147 (257)
T d1swva_ 75 T---EADIQEMYEEFEEILFAIL-PRYASPINGVKEVIASLRERGIKIGSTTG---YTREMMDIVAKEAALQGYKPDFLV 147 (257)
T ss_dssp C---HHHHHHHHHHHHHHHHHHG-GGGCCBCTTHHHHHHHHHHTTCEEEEBCS---SCHHHHHHHHHHHHHTTCCCSCCB
T ss_pred C---HHHHHHHHHHHHHHHHHHh-hccCccCCcHHHHHHHHHhcccceeecCC---CchhhHHHHHHHHhhccccccccc
Confidence 1 1224455666666666665 33467999999999999999999999999 557889999999999998733255
Q ss_pred chhhHHHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCC
Q 017067 236 GNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK 315 (378)
Q Consensus 236 ~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv 315 (378)
+++++.. .||+|++ |..+++++|+
T Consensus 148 ~~d~~~~------------------------------------------~KP~p~~--------------~~~~~~~l~~ 171 (257)
T d1swva_ 148 TPDDVPA------------------------------------------GRPYPWM--------------CYKNAMELGV 171 (257)
T ss_dssp CGGGSSC------------------------------------------CTTSSHH--------------HHHHHHHHTC
T ss_pred ccccccc------------------------------------------cccChHH--------------HHHHHHHhCC
Confidence 5544322 2777776 9999999999
Q ss_pred C-CCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCC----C---------------------CCCCCcEEecCCCcchHH
Q 017067 316 P-VRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSR----A---------------------EFPSANAVMDGFGGADLT 369 (378)
Q Consensus 316 ~-p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~----~---------------------~l~~ad~vi~~l~e~~~~ 369 (378)
. +++|+||||+.+||++|+++||.+|+|.++...- + ....||+|++++.|+...
T Consensus 172 ~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi~~l~eL~~i 251 (257)
T d1swva_ 172 YPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESV 251 (257)
T ss_dssp CSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHH
T ss_pred CCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEEECCHHHHHHH
Confidence 5 5999999999999999999999999999886421 1 112489999999999988
Q ss_pred HHHHh
Q 017067 370 ISKLR 374 (378)
Q Consensus 370 ~~~l~ 374 (378)
+..|.
T Consensus 252 i~~~~ 256 (257)
T d1swva_ 252 MEHIE 256 (257)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 87764
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.95 E-value=9e-28 Score=215.20 Aligned_cols=215 Identities=13% Similarity=0.128 Sum_probs=154.5
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHc--CCCCCCCchhhH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRI--GWPTSVPTNEKK 160 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--g~~~~l~~~~~~ 160 (378)
++|+|+||+||||+|+... +..++.++++++|++. .+...+...... ............. .....+...
T Consensus 3 ~~k~iiFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--- 73 (224)
T d2hsza1 3 QFKLIGFDLDGTLVNSLPD-LALSINSALKDVNLPQ--ASENLVMTWIGN---GADVLSQRAVDWACKQAEKELTED--- 73 (224)
T ss_dssp SCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCCC--CCHHHHHHHCSS---CHHHHHHHHHHHHHHHHTCCCCHH---
T ss_pred CCCEEEEeCCCCcccCHHH-HHHHHHHHHHHCCCCC--CcHHHHHHHhhh---hhhhhhhhhhhhhhhhhhhhhhHH---
Confidence 5899999999999999886 8899999999999873 444444443321 1211111111110 011112111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhH
Q 017067 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (378)
Q Consensus 161 ~~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~ 240 (378)
.+..........+.+.. .....++||+.++|..|+++|++++++||. ....++.+++.+|+..+|+.. ++.++.
T Consensus 74 -~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~---~~~~~~~~l~~~gl~~~f~~~-~~~~~~ 147 (224)
T d2hsza1 74 -EFKYFKRQFGFYYGENL-CNISRLYPNVKETLEALKAQGYILAVVTNK---PTKHVQPILTAFGIDHLFSEM-LGGQSL 147 (224)
T ss_dssp -HHHHHHHHHHHHHHHHT-TSSCEECTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHTTCGGGCSEE-ECTTTS
T ss_pred -HHHHHHHHHHHHHHHhh-ccccchHHHHHHHHHHHhccCCcccccccc---cHHHHHHHHHhcCchhhcccc-cccccc
Confidence 12222222333333322 446779999999999999999999999994 468899999999999999884 444333
Q ss_pred HHhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcE
Q 017067 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (378)
Q Consensus 241 ~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~ 320 (378)
.. .||.|++ |..++++++++|++|
T Consensus 148 ~~------------------------------------------~kp~p~~--------------~~~~~~~~~~~~~~~ 171 (224)
T d2hsza1 148 PE------------------------------------------IKPHPAP--------------FYYLCGKFGLYPKQI 171 (224)
T ss_dssp SS------------------------------------------CTTSSHH--------------HHHHHHHHTCCGGGE
T ss_pred cc------------------------------------------ccccchh--------------hHHHHHHhhhhhhcc
Confidence 21 2555555 999999999999999
Q ss_pred EEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC--CCcEEecCCCcchH
Q 017067 321 FLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP--SANAVMDGFGGADL 368 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~--~ad~vi~~l~e~~~ 368 (378)
+||||+.+|+++|+++||.+|+|.++.....++. .+|++++++.|+..
T Consensus 172 ~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~ 221 (224)
T d2hsza1 172 LFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILK 221 (224)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGG
T ss_pred chhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHH
Confidence 9999999999999999999999999887766554 48999999999864
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.95 E-value=4e-27 Score=211.81 Aligned_cols=214 Identities=17% Similarity=0.210 Sum_probs=159.2
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHH
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i 163 (378)
+|+||||+||||+|++.. +..+|+++++++|++ ++...+...+ .+.....+...+....+.+.. .
T Consensus 2 ~kaviFD~DGtL~dt~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~------~--- 66 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEII-AAQVESRLLTEAGYP---ISVEEMGERF--AGMTWKNILLQVESEASIPLS------A--- 66 (222)
T ss_dssp CSEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHHHHHH--TTCCHHHHHHHHHHHHCCCCC------T---
T ss_pred ceEEEECCCCcccCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHH--hhhcccccccccccccccccc------c---
Confidence 689999999999999887 889999999999997 5555443333 222344555666667665532 1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHh
Q 017067 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (378)
Q Consensus 164 ~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~ 243 (378)
...+.....+.+.+ .....+.||+.++|++|+. +.+++||+ ....+..+++.+|+..+|+..+++.++....
T Consensus 67 -~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~---~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~ 138 (222)
T d2fdra1 67 -SLLDKSEKLLDMRL-ERDVKIIDGVKFALSRLTT---PRCICSNS---SSHRLDMMLTKVGLKPYFAPHIYSAKDLGAD 138 (222)
T ss_dssp -HHHHHHHHHHHHHH-HHHCCBCTTHHHHHHHCCS---CEEEEESS---CHHHHHHHHHHTTCGGGTTTCEEEHHHHCTT
T ss_pred -cchhHHHHHHHHHh-hhccchhhhHHHHhhhccc---cceeeeec---chhhhhhhhcccccccccceeeccccccccc
Confidence 22333333333333 2235689999999988864 56899994 4688899999999999999866666543221
Q ss_pred hhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 017067 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (378)
Q Consensus 244 ~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~V 323 (378)
..||+|++ |..+++++|++|++|+||
T Consensus 139 ----------------------------------------~~KP~~~~--------------~~~~~~~l~~~p~~~l~v 164 (222)
T d2fdra1 139 ----------------------------------------RVKPKPDI--------------FLHGAAQFGVSPDRVVVV 164 (222)
T ss_dssp ----------------------------------------CCTTSSHH--------------HHHHHHHHTCCGGGEEEE
T ss_pred ----------------------------------------ccccCHHH--------------HHHHHHhhCCCCceEEEE
Confidence 12666555 999999999999999999
Q ss_pred eCCHhHHHHHHHcCCCEEEEcCCCCCCC----CCC--CCcEEecCCCcchHHHHHHh
Q 017067 324 AGSQSGVAGAQRIGMPCVVMRSSLTSRA----EFP--SANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 324 GDs~~Di~aA~~aG~~~i~v~~~~~~~~----~l~--~ad~vi~~l~e~~~~~~~l~ 374 (378)
||+..|+++|+++||++|++.++..... ++. .||+|++++.|+...|+.|.
T Consensus 165 gDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll~~l~ 221 (222)
T d2fdra1 165 EDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMA 221 (222)
T ss_dssp ESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHHHHhc
Confidence 9999999999999999999998864332 222 48999999999988888774
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.94 E-value=4e-27 Score=211.65 Aligned_cols=206 Identities=16% Similarity=0.228 Sum_probs=149.8
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
.+|+|+||+||||+|+... +..+|.+++.++|++. .. ..+...+. +.........+....+.. +..++
T Consensus 1 MikaiiFD~DGTL~ds~~~-~~~a~~~~~~~~g~~~--~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~---- 68 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAEY-HFRAWKALAEEIGING--VD-RQFNEQLK--GVSREDSLQKILDLADKK--VSAEE---- 68 (221)
T ss_dssp CCCEEEECCBTTTBTHHHH-HHHHHHHHHHHTTCCC--CC-HHHHTTTT--TCCHHHHHHHHHTTSSSC--CCHHH----
T ss_pred CCcEEEEcCCCCeEcCHHH-HHHHHHHHHHHcCCCC--Ch-HHHHHHHh--hccchhhhhhcccccccc--chhhh----
Confidence 3789999999999999886 7899999999999873 22 33222221 122333333343333222 22222
Q ss_pred HHHHHHHHHHHHHHHHhcC-CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 163 VKNVLQEKKNALDEFLASK-DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~-~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
...+.+...+.|.+.+... ..+++||+.++|+.|+++|++++++||+ ......++.+|+..+|+.. +++++..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~-----~~~~~~l~~~~l~~~f~~i-~~~~~~~ 142 (221)
T d1o08a_ 69 FKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS-----KNGPFLLERMNLTGYFDAI-ADPAEVA 142 (221)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSC-----TTHHHHHHHTTCGGGCSEE-CCTTTSS
T ss_pred hhhHHHHHHhhccccccccccccccCCceeccccccccccceEEEeec-----chhhHHHHhhccccccccc-ccccccc
Confidence 3455556666666655322 4679999999999999999999999994 3357889999999999984 4443331
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. +||+|++ |+.+++++|++|++|+
T Consensus 143 ~------------------------------------------~KP~~~~--------------~~~~l~~~~i~~~~~l 166 (221)
T d1o08a_ 143 A------------------------------------------SKPAPDI--------------FIAAAHAVGVAPSESI 166 (221)
T ss_dssp S------------------------------------------CTTSTHH--------------HHHHHHHTTCCGGGEE
T ss_pred c------------------------------------------cccChHH--------------HHHHHHHcCCCCceEE
Confidence 1 2777666 9999999999999999
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcc
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~ 366 (378)
||||+.+|+++|+++||++|+|+++ .....++.+++++.++
T Consensus 167 ~VgD~~~di~~A~~aG~~~i~v~~~----~~~~~~~~~~~~~~~~ 207 (221)
T d1o08a_ 167 GLEDSQAGIQAIKDSGALPIGVGRP----EDLGDDIVIVPDTSHY 207 (221)
T ss_dssp EEESSHHHHHHHHHHTCEEEEESCH----HHHCSSSEEESSGGGC
T ss_pred EEecCHHHHHHHHHcCCEEEEECCh----hhcccccEEcCCcccC
Confidence 9999999999999999999999876 3344467788888775
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.94 E-value=1.5e-27 Score=216.07 Aligned_cols=219 Identities=14% Similarity=0.174 Sum_probs=154.1
Q ss_pred ccEEEEecccccccccccchHHHHHHHHHHc-CCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKL-GLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~~~~~~a~~~~~~~~-gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
.|+|+||+||||+|+... +..++.+++.++ +... .... ....+..............++. ..+....
T Consensus 2 ~klviFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 69 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESM-NRRVLADALIEVYGTEG---STGS----HDFSGKMDGAIIYEVLSNVGLE----RAEIADK 69 (228)
T ss_dssp CEEEEECCBTTTEEECTH-HHHHHHHHHHHHHSCCC---CC-------CCTTCCHHHHHHHHHHTTTCC----HHHHHHH
T ss_pred ceEEEEeCCCCcccCHHH-HHHHHHHHHHHHcCCCc---cHHH----HHHhcCchHHHHHHHHHHhCCC----hHHHHHH
Confidence 478999999999999987 778888887774 4442 1111 0111112222233334444433 1222233
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCC-CcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G-~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
++...+.+...+.+.......+++||+.++|+.|+++| ++++|+||. ....+..+++.+|+.++|+.. ++.++..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~---~~~~~~~~l~~~gl~~~fd~i-~~~~~~~ 145 (228)
T d2hcfa1 70 FDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGN---FEASGRHKLKLPGIDHYFPFG-AFADDAL 145 (228)
T ss_dssp HHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSS---CHHHHHHHHHTTTCSTTCSCE-ECTTTCS
T ss_pred HHHHHHHHHHHHHHHhhccCceecCchHHHHhhhhccccccccccCCC---cchhhhhhhhhhccccccccc-ccccccc
Confidence 44455555555655554445778999999999999997 899999994 468899999999999999984 4443321
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHc---CCCCC
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA---EKPVR 318 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~l---gv~p~ 318 (378)
. +||.|++ +...+..+ |++|+
T Consensus 146 ~------------------------------------------~k~~p~~--------------~~~~~~~~~~~~~~p~ 169 (228)
T d2hcfa1 146 D------------------------------------------RNELPHI--------------ALERARRMTGANYSPS 169 (228)
T ss_dssp S------------------------------------------GGGHHHH--------------HHHHHHHHHCCCCCGG
T ss_pred c------------------------------------------ccchhHH--------------HHHHhhhhcccCCChh
Confidence 1 1444433 44444444 79999
Q ss_pred cEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC--CCcEEecCCCcchHHHHHHh
Q 017067 319 NCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP--SANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 319 ~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~--~ad~vi~~l~e~~~~~~~l~ 374 (378)
+|+||||+.+|+++|+++||++|+|.++....+++. .||++++++.|+...+..|+
T Consensus 170 ~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l~~l~ 227 (228)
T d2hcfa1 170 QIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASIL 227 (228)
T ss_dssp GEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHHHH
T ss_pred HheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHHHHHh
Confidence 999999999999999999999999998877766554 48999999999999888875
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.94 E-value=5.7e-27 Score=208.56 Aligned_cols=198 Identities=19% Similarity=0.211 Sum_probs=142.7
Q ss_pred cEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHHHH
Q 017067 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVK 164 (378)
Q Consensus 85 kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~i~ 164 (378)
+|+|||+||||+|+... +..+|++++.++|++ ++...+...+.. .........+....+.. .+
T Consensus 2 ~a~iFD~DGTL~ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----------~~ 64 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEA-ILSGIEETFAQFSIP---YDKEKVREFIFK--YSVQDLLVRVAEDRNLD-----------VE 64 (204)
T ss_dssp CEEEECTBTTTEECHHH-HHHHHHHHHHHHTCC---CCHHHHHHHHHH--SCHHHHHHHHHHHHTCC-----------HH
T ss_pred EEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhhcc--cccccccccccchhhhh-----------HH
Confidence 58999999999999886 788999999999997 444444443322 22333333443333322 11
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhh
Q 017067 165 NVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSL 244 (378)
Q Consensus 165 ~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~ 244 (378)
.+.......+.+ . .....++||+.++|+.|+++|++++|+||.. . .+..+++.+|+.++|+. ++++++...
T Consensus 65 ~~~~~~~~~~~~-~-~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~---~-~~~~~l~~~gl~~~f~~-i~~s~~~~~-- 135 (204)
T d2go7a1 65 VLNQVRAQSLAE-K-NAQVVLMPGAREVLAWADESGIQQFIYTHKG---N-NAFTILKDLGVESYFTE-ILTSQSGFV-- 135 (204)
T ss_dssp HHHHHHHHHHTT-C-GGGCEECTTHHHHHHHHHHTTCEEEEECSSC---T-HHHHHHHHHTCGGGEEE-EECGGGCCC--
T ss_pred HHHHHHHHHHHh-h-cccCcccchHHhhhhcccccccchhhhcccc---h-hhhhhhhhccccccccc-ccccccccc--
Confidence 111111112211 1 2246789999999999999999999999953 3 45678999999999987 455543321
Q ss_pred hhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEe
Q 017067 245 YGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIA 324 (378)
Q Consensus 245 ~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VG 324 (378)
.||+|++ |+.+++++|++|++|+|||
T Consensus 136 ----------------------------------------~Kp~~~~--------------~~~~~~~~~~~p~~~l~Vg 161 (204)
T d2go7a1 136 ----------------------------------------RKPSPEA--------------ATYLLDKYQLNSDNTYYIG 161 (204)
T ss_dssp ----------------------------------------CTTSSHH--------------HHHHHHHHTCCGGGEEEEE
T ss_pred ----------------------------------------cchhHHH--------------HHHHHHHhCCCCceEEEEe
Confidence 2666666 9999999999999999999
Q ss_pred CCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchH
Q 017067 325 GSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADL 368 (378)
Q Consensus 325 Ds~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~ 368 (378)
|+.+|+++|+++||++|++.++.. .+++.++++.|+..
T Consensus 162 D~~~Di~~A~~~G~~~i~v~~~~~------~~~~~~~~~~dl~~ 199 (204)
T d2go7a1 162 DRTLDVEFAQNSGIQSINFLESTY------EGNHRIQALADISR 199 (204)
T ss_dssp SSHHHHHHHHHHTCEEEESSCCSC------TTEEECSSTTHHHH
T ss_pred CCHHHHHHHHHcCCeEEEEcCCCC------CcCeecCCHHHHHH
Confidence 999999999999999999987632 36788898888753
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.94 E-value=9.3e-27 Score=207.60 Aligned_cols=203 Identities=15% Similarity=0.209 Sum_probs=149.4
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~~ 162 (378)
++|+|+||+||||+|+... +..+|+++++++|++. .+.+.+..+. +..... .+... ++.+.
T Consensus 3 ~ik~VifD~DGTL~ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~---~~~~~~---~~~~~------~~~~~---- 63 (210)
T d2ah5a1 3 SITAIFFDLDGTLVDSSIG-IHNAFTYTFKELGVPS--PDAKTIRGFM---GPPLES---SFATC------LSKDQ---- 63 (210)
T ss_dssp TCCEEEECSBTTTEECHHH-HHHHHHHHHHHHTCCC--CCHHHHHHTS---SSCHHH---HHHTT------SCGGG----
T ss_pred CCCEEEEeCCCccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHhh---hcchhh---hcccc------ccchh----
Confidence 5799999999999999886 7899999999999873 3434333322 222222 12111 11122
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHH
Q 017067 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (378)
Q Consensus 163 i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~ 242 (378)
+....+.+...+.+.. ....+++||+.++|+.++.+ ++++|+|| +....++.+++.+|+..+|+.. ++.++.
T Consensus 64 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~-~~~~i~t~---~~~~~~~~~l~~~gl~~~fd~v-~~~~~~-- 135 (210)
T d2ah5a1 64 ISEAVQIYRSYYKAKG-IYEAQLFPQIIDLLEELSSS-YPLYITTT---KDTSTAQDMAKNLEIHHFFDGI-YGSSPE-- 135 (210)
T ss_dssp HHHHHHHHHHHHHHTG-GGSCEECTTHHHHHHHHHTT-SCEEEEEE---EEHHHHHHHHHHTTCGGGCSEE-EEECSS--
T ss_pred hHHHHHHHHHHHHhhh-hhcccchhHHHHHHhhhhcc-cchhhccc---ccchhhhHHHHhhccccccccc-cccccc--
Confidence 2333444444444433 33567899999999999987 49999999 5679999999999999999874 333221
Q ss_pred hhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017067 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (378)
Q Consensus 243 ~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~ 322 (378)
.||.|++ |..+++++|++|++|+|
T Consensus 136 ------------------------------------------~~~~p~~--------------~~~~~~~~~~~~~~~v~ 159 (210)
T d2ah5a1 136 ------------------------------------------APHKADV--------------IHQALQTHQLAPEQAII 159 (210)
T ss_dssp ------------------------------------------CCSHHHH--------------HHHHHHHTTCCGGGEEE
T ss_pred ------------------------------------------ccccccc--------------cchhhhhhhccccccee
Confidence 0333333 99999999999999999
Q ss_pred EeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCC--CCcEEecCCCcchH
Q 017067 323 IAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFP--SANAVMDGFGGADL 368 (378)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~--~ad~vi~~l~e~~~ 368 (378)
|||+.+|+++|+++||++|+|.++....+++. .||++++++.|+..
T Consensus 160 VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~ 207 (210)
T d2ah5a1 160 IGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp EESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred ecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHH
Confidence 99999999999999999999999877766664 38999999999743
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.93 E-value=5.6e-25 Score=199.32 Aligned_cols=130 Identities=14% Similarity=0.198 Sum_probs=110.6
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
..++||+.++|+.|+ +|++++++|| +.....+.+++.+|+.++|+. +++++++..
T Consensus 99 ~~~~p~~~~~L~~l~-~~~~i~i~Sn---~~~~~~~~~l~~~gl~~~fd~-i~~s~~~~~-------------------- 153 (230)
T d1x42a1 99 GELYPEVVEVLKSLK-GKYHVGMITD---SDTEYLMAHLDALGIKDLFDS-ITTSEEAGF-------------------- 153 (230)
T ss_dssp CCBCTTHHHHHHHHB-TTBEEEEEES---SCHHHHHHHHHHHTCGGGCSE-EEEHHHHTB--------------------
T ss_pred CcccccHHHHHHHhh-ccCceeeeec---cccccchhhhccccccccccc-ccccccccc--------------------
Confidence 568999999999997 4799999999 457889999999999999998 455544421
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCV 341 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i 341 (378)
.||+|.+ |+.+++++|++|++|++|||+. +||++|+++||++|
T Consensus 154 ----------------------~KP~~~~--------------~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v 197 (230)
T d1x42a1 154 ----------------------FKPHPRI--------------FELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSI 197 (230)
T ss_dssp ----------------------CTTSHHH--------------HHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEE
T ss_pred ----------------------cchhhHH--------------HHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEE
Confidence 2666666 9999999999999999999985 79999999999999
Q ss_pred EEcCCCCCCCCCCCCcEEecCCCcchHHHHHH
Q 017067 342 VMRSSLTSRAEFPSANAVMDGFGGADLTISKL 373 (378)
Q Consensus 342 ~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l 373 (378)
++..+.........+|++++++.|+...+.+|
T Consensus 198 ~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~l 229 (230)
T d1x42a1 198 LLDRKGEKREFWDKCDFIVSDLREVIKIVDEL 229 (230)
T ss_dssp EECTTSCCGGGGGGSSEEESSTTHHHHHHHHH
T ss_pred EECCCCCCcccccCCCEEECCHHHHHHHHHHc
Confidence 99877666666667899999999998777765
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.92 E-value=5.2e-25 Score=194.20 Aligned_cols=179 Identities=17% Similarity=0.190 Sum_probs=132.9
Q ss_pred CCccEEEEecccccccccccchHHHHHHHHHHcCCCCCCCChhHHHHHHhhccCChHHHHHHHHHHcCCCCCCCchhhHH
Q 017067 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~~~~~~~a~~~~~~~~gl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~l~~~~~~~ 161 (378)
|++|+||||+||||+|+... +..+|+++++++|++ ++...+...++.. ..... +..... .
T Consensus 1 M~~k~viFD~DGTL~dt~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~---~~~~~----~~~~~~--~------- 60 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYET-STAAFVETLALYGIT---QDHDSVYQALKVS---TPFAI----ETFAPN--L------- 60 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHHHC---HHHHH----HHHCTT--C-------
T ss_pred CCCCEEEEeCCCCcccCHHH-HHHHHHHHHHHcCCC---ccHHHHHhhhhcc---chhhh----hhhhHH--H-------
Confidence 67899999999999998886 889999999999997 5666655555432 22222 222111 1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHH
Q 017067 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (378)
Q Consensus 162 ~i~~~~~~~~~~~~~~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~ 241 (378)
+...+.+.+.+...+ ....++||+.++|+.|+++|++++|+||+. ... ...++.+++..+|+. +++++++.
T Consensus 61 --~~~~~~~~~~~~~~~--~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~---~~~-~~~l~~~~l~~~fd~-i~~~~~~~ 131 (187)
T d2fi1a1 61 --ENFLEKYKENEAREL--EHPILFEGVSDLLEDISNQGGRHFLVSHRN---DQV-LEILEKTSIAAYFTE-VVTSSSGF 131 (187)
T ss_dssp --TTHHHHHHHHHHHHT--TSCCBCTTHHHHHHHHHHTTCEEEEECSSC---THH-HHHHHHTTCGGGEEE-EECGGGCC
T ss_pred --HHHHHHHHHHHHHHh--hcCcccchhHHHHHHHHhhhccccccccCc---cch-hhhhhhhcccccccc-cccccccc
Confidence 122233333333333 246789999999999999999999999953 444 457899999999997 55555432
Q ss_pred HhhhhccccccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEE
Q 017067 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (378)
Q Consensus 242 ~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i 321 (378)
. .||+|++ |+.+++++++ ++|+
T Consensus 132 ~------------------------------------------~KP~p~~--------------~~~~~~~~~~--~~~l 153 (187)
T d2fi1a1 132 K------------------------------------------RKPNPES--------------MLYLREKYQI--SSGL 153 (187)
T ss_dssp C------------------------------------------CTTSCHH--------------HHHHHHHTTC--SSEE
T ss_pred c------------------------------------------cCCCHHH--------------HHHHHHHcCC--CCeE
Confidence 1 2777776 9999999986 5699
Q ss_pred EEeCCHhHHHHHHHcCCCEEEEcCCC
Q 017067 322 LIAGSQSGVAGAQRIGMPCVVMRSSL 347 (378)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~~ 347 (378)
||||+..|+++|+++||++|++.++.
T Consensus 154 ~vgDs~~Di~aA~~aG~~~i~v~~~~ 179 (187)
T d2fi1a1 154 VIGDRPIDIEAGQAAGLDTHLFTSIV 179 (187)
T ss_dssp EEESSHHHHHHHHHTTCEEEECSCHH
T ss_pred EEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 99999999999999999999998753
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.92 E-value=2.2e-24 Score=196.68 Aligned_cols=134 Identities=12% Similarity=0.163 Sum_probs=108.0
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
...++||+.++|+.|+ +|++++|+|| +.....+..++.+|+.++|+.. ++++++..
T Consensus 107 ~~~~~~~~~~~L~~L~-~~~~l~i~Tn---~~~~~~~~~l~~~gl~~~fd~i-~~s~~~~~------------------- 162 (247)
T d2gfha1 107 HMILADDVKAMLTELR-KEVRLLLLTN---GDRQTQREKIEACACQSYFDAI-VIGGEQKE------------------- 162 (247)
T ss_dssp TCCCCHHHHHHHHHHH-TTSEEEEEEC---SCHHHHHHHHHHHTCGGGCSEE-EEGGGSSS-------------------
T ss_pred cCccCccHHHHHHHhh-cccceEEeec---ccchhhhhhhhhcccccccccc-cccccccc-------------------
Confidence 4679999999999998 5799999999 4568888999999999999874 44444321
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 340 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~ 340 (378)
.||+|.+ |+.+++++|++|++|+||||+. +||.+|+++||++
T Consensus 163 -----------------------~KP~p~~--------------~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~ 205 (247)
T d2gfha1 163 -----------------------EKPAPSI--------------FYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKA 205 (247)
T ss_dssp -----------------------CTTCHHH--------------HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSE
T ss_pred -----------------------chhhhhh--------------HHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeE
Confidence 2666666 9999999999999999999996 7999999999986
Q ss_pred EEEcCCCCC--CCCCCCCcEEecCCCcchHHHHHHhhc
Q 017067 341 VVMRSSLTS--RAEFPSANAVMDGFGGADLTISKLRHS 376 (378)
Q Consensus 341 i~v~~~~~~--~~~l~~ad~vi~~l~e~~~~~~~l~~~ 376 (378)
+++.++... ......+|++++++.|+...++.+-.+
T Consensus 206 ~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll~~i~~~ 243 (247)
T d2gfha1 206 TVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSIDCK 243 (247)
T ss_dssp EEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHHHTTC
T ss_pred EEEECCCCCCcccccCCCCEEECCHHHHHHHHHHHhhh
Confidence 654333232 233345899999999999888888665
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=2.6e-24 Score=194.01 Aligned_cols=126 Identities=10% Similarity=0.054 Sum_probs=102.2
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
...++||+.++|.+|+++|++++|+|| +.....+.+++.+|+.++++..+.+.++..
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-------------------- 181 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSS---GSVEAQKLLFGHSTEGDILELVDGHFDTKI-------------------- 181 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHTBTTBCCGGGCSEEECGGG--------------------
T ss_pred ccccCCCHHHHHHHHhhccCceeecCC---CcHHHHHHHHHHcCcchhhhhcceeecccc--------------------
Confidence 467899999999999999999999999 456888899999999998886443332221
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
..||+|.+ |..+++++|++|++|+||||+.+||.+|+++||++|
T Consensus 182 ----------------------~~KP~p~~--------------~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti 225 (253)
T d1zs9a1 182 ----------------------GHKVESES--------------YRKIADSIGCSTNNILFLTDVTREASAAEEADVHVA 225 (253)
T ss_dssp ----------------------CCTTCHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEE
T ss_pred ----------------------ccCCCcHH--------------HHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEE
Confidence 12666666 999999999999999999999999999999999999
Q ss_pred EEcCCCCCCC--CCCCCcEEecCCCcc
Q 017067 342 VMRSSLTSRA--EFPSANAVMDGFGGA 366 (378)
Q Consensus 342 ~v~~~~~~~~--~l~~ad~vi~~l~e~ 366 (378)
+|..+..... ....++.+++||.||
T Consensus 226 ~v~r~g~~~~~~~~~~~~~~i~sl~EL 252 (253)
T d1zs9a1 226 VVVRPGNAGLTDDEKTYYSLITSFSEL 252 (253)
T ss_dssp EECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred EEeCCCCCCCchhhcCCCcEECChHHh
Confidence 9976543322 223468899999886
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.90 E-value=3.3e-23 Score=185.07 Aligned_cols=126 Identities=13% Similarity=0.118 Sum_probs=105.6
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
...++|++.++++.++++|++++++||. .....+..++.+++..+|+.. ++++++..
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~---~~~~~~~~~~~~~~~~~fd~~-~~s~~~~~------------------- 147 (220)
T d1zrna_ 91 RLAPFSEVPDSLRELKRRGLKLAILSNG---SPQSIDAVVSHAGLRDGFDHL-LSVDPVQV------------------- 147 (220)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSEE-EESGGGTC-------------------
T ss_pred cccccchhHHHHHHHHhcCCeEEeecch---HHHHHHHHHhhccccccccce-eeeeeeec-------------------
Confidence 4668999999999999999999999994 468888999999999999984 44433321
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
.||+|++ |+.+++++|++|++|+||||+..||.+|+++||++|
T Consensus 148 -----------------------~KP~p~~--------------~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v 190 (220)
T d1zrna_ 148 -----------------------YKPDNRV--------------YELAEQALGLDRSAILFVASNAWDATGARYFGFPTC 190 (220)
T ss_dssp -----------------------CTTSHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEE
T ss_pred -----------------------cccHHHH--------------HHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEE
Confidence 2767666 999999999999999999999999999999999999
Q ss_pred EEcCCCCCCCCC-CCCcEEecCCCcch
Q 017067 342 VMRSSLTSRAEF-PSANAVMDGFGGAD 367 (378)
Q Consensus 342 ~v~~~~~~~~~l-~~ad~vi~~l~e~~ 367 (378)
+|.++.....+. ..+|+++++|.|+.
T Consensus 191 ~v~r~~~~~~~~~~~~d~~i~~l~el~ 217 (220)
T d1zrna_ 191 WINRTGNVFEEMGQTPDWEVTSLRAVV 217 (220)
T ss_dssp EECTTCCCCCSSSCCCSEEESSHHHHH
T ss_pred EEcCCCCCcccccCCCCEEECCHHHHH
Confidence 998665544433 45899999998874
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.90 E-value=8.2e-24 Score=191.89 Aligned_cols=130 Identities=10% Similarity=0.145 Sum_probs=105.5
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
...++|++.++|+.|+ |+.++++||+ ....+...++.+++.++|+. +++++++..
T Consensus 91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~---~~~~~~~~~~~~~~~~~fd~-v~~s~~~~~------------------- 145 (245)
T d1qq5a_ 91 RLTPYPDAAQCLAELA--PLKRAILSNG---APDMLQALVANAGLTDSFDA-VISVDAKRV------------------- 145 (245)
T ss_dssp SCCBCTTHHHHHHHHT--TSEEEEEESS---CHHHHHHHHHHTTCGGGCSE-EEEGGGGTC-------------------
T ss_pred ccccchhhhHHHHHHh--hhceeEEecc---chHHHHHHHhhccccccccc-ccccccccc-------------------
Confidence 4678999999999885 6889999994 46888899999999999997 455544422
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
.||+|++ |..+++++|++|++|+||||+.+||.+|+++||++|
T Consensus 146 -----------------------~KP~p~~--------------f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv 188 (245)
T d1qq5a_ 146 -----------------------FKPHPDS--------------YALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVA 188 (245)
T ss_dssp -----------------------CTTSHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred -----------------------cCccHHH--------------HHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEE
Confidence 3777777 999999999999999999999999999999999999
Q ss_pred EEcCCCC-----------------------CCCCC-CCCcEEecCCCcchHHHHHH
Q 017067 342 VMRSSLT-----------------------SRAEF-PSANAVMDGFGGADLTISKL 373 (378)
Q Consensus 342 ~v~~~~~-----------------------~~~~l-~~ad~vi~~l~e~~~~~~~l 373 (378)
+|+.+.. ....+ ..+|++++++.|+...+..|
T Consensus 189 ~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~lv~~~ 244 (245)
T d1qq5a_ 189 RVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVRGM 244 (245)
T ss_dssp EECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHH
T ss_pred EEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHHHHHHHhh
Confidence 9975421 01112 24799999999998777654
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=1.5e-21 Score=172.89 Aligned_cols=109 Identities=10% Similarity=0.031 Sum_probs=88.0
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCC-chHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~-~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
..++||+.++|..|+++|++++++||.... .....+......++.++|+.. ++++++.
T Consensus 98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i-~~s~~~~-------------------- 156 (225)
T d1zd3a1 98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFL-IESCQVG-------------------- 156 (225)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEE-EEHHHHT--------------------
T ss_pred CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEE-Eeccccc--------------------
Confidence 458999999999999999999999996432 223444556677888899884 4444432
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
.+||+|.+ |+.+++++|++|++|+||||+.+||++|+++||++|
T Consensus 157 ----------------------~~KP~~~~--------------~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti 200 (225)
T d1zd3a1 157 ----------------------MVKPEPQI--------------YKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTI 200 (225)
T ss_dssp ----------------------CCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEE
T ss_pred ----------------------cchhHHHH--------------HHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEE
Confidence 23777666 999999999999999999999999999999999999
Q ss_pred EEcCCCC
Q 017067 342 VMRSSLT 348 (378)
Q Consensus 342 ~v~~~~~ 348 (378)
+|.++..
T Consensus 201 ~v~~~~~ 207 (225)
T d1zd3a1 201 LVQDTDT 207 (225)
T ss_dssp ECSSHHH
T ss_pred EECCcch
Confidence 9987643
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.85 E-value=1.4e-22 Score=180.88 Aligned_cols=111 Identities=11% Similarity=0.101 Sum_probs=92.0
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCC-CchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGK-SGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~-~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
..++|++.++|+.|+++|++++++||... ......+..+..+|+..+|+. +++++++.
T Consensus 96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~-i~~s~~~~-------------------- 154 (222)
T d1cr6a1 96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDF-LIESCQVG-------------------- 154 (222)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSE-EEEHHHHS--------------------
T ss_pred CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhce-eeehhhcc--------------------
Confidence 56899999999999999999999998542 223456667788999999998 45554442
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
.+||+|.+ |+.+++++|++|++||||||+.+||++|+++||++|
T Consensus 155 ----------------------~~KP~p~~--------------~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti 198 (222)
T d1cr6a1 155 ----------------------MIKPEPQI--------------YNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTI 198 (222)
T ss_dssp ----------------------CCTTCHHH--------------HHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEE
T ss_pred ----------------------CCCCChHH--------------HHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEE
Confidence 13777666 999999999999999999999999999999999999
Q ss_pred EEcCCCCCC
Q 017067 342 VMRSSLTSR 350 (378)
Q Consensus 342 ~v~~~~~~~ 350 (378)
+|.++....
T Consensus 199 ~V~~~~~~~ 207 (222)
T d1cr6a1 199 LVHNTASAL 207 (222)
T ss_dssp ECCSSSHHH
T ss_pred EECCcchHH
Confidence 998875543
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.84 E-value=3.8e-20 Score=164.51 Aligned_cols=61 Identities=7% Similarity=0.024 Sum_probs=52.5
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcc
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~ 366 (378)
|+.+++++|++|++|+||||+.+||.+|+++||++|+|..+......-..+..++++|.||
T Consensus 165 f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~~i~~~~eL 225 (225)
T d2g80a1 165 YANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225 (225)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred hHHHHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCCccCChhhC
Confidence 9999999999999999999999999999999999999986544433334467789999885
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.81 E-value=9.9e-21 Score=163.89 Aligned_cols=104 Identities=13% Similarity=0.189 Sum_probs=86.4
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
.+.++||+.++|+.|+++|++++|+||+. .....+..++.+++.++|.... ..
T Consensus 44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~--~~~~~~~~l~~~~~~~~~~~~~-~~------------------------ 96 (164)
T d1u7pa_ 44 NIQLYPEVPEVLGRLQSLGVPVAAASRTS--EIQGANQLLELFDLGKYFIQRE-IY------------------------ 96 (164)
T ss_dssp EECCCTTHHHHHHHHHHTTCCEEEEECCS--CHHHHHHHHHHTTCGGGCSEEE-ES------------------------
T ss_pred ccccchHHHHHHHHHHHCCCcEEEEeccc--cchhhccchhcccccccceeee-cc------------------------
Confidence 36799999999999999999999999853 2456677889999988887631 11
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
.||.|+. |..+++++|++|++|+||||+..|+++|+++||++|
T Consensus 97 -----------------------~kp~~~~--------------~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i 139 (164)
T d1u7pa_ 97 -----------------------PGSKVTH--------------FERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCI 139 (164)
T ss_dssp -----------------------SSCHHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred -----------------------cCCChHH--------------HHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEE
Confidence 1444333 899999999999999999999999999999999999
Q ss_pred EEcCCCCC
Q 017067 342 VMRSSLTS 349 (378)
Q Consensus 342 ~v~~~~~~ 349 (378)
+|.++.+.
T Consensus 140 ~v~~G~~~ 147 (164)
T d1u7pa_ 140 HIRDGMSL 147 (164)
T ss_dssp ECSSCCCH
T ss_pred EECCCCCh
Confidence 99988643
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.81 E-value=9.7e-21 Score=163.58 Aligned_cols=107 Identities=15% Similarity=0.207 Sum_probs=85.3
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH-hCccccchheeechhhHHHhhhhccccccccccCcch
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~-lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~ 260 (378)
...+.+++.+++..++.+|++++++||... ......+.. .++.++|+. ++++++..
T Consensus 82 ~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~---~~~~~~~~~~~~l~~~fd~-v~~s~~~~------------------- 138 (197)
T d2b0ca1 82 FVALRPEVIAIMHKLREQGHRVVVLSNTNR---LHTTFWPEEYPEIRDAADH-IYLSQDLG------------------- 138 (197)
T ss_dssp EEEECHHHHHHHHHHHHTTCEEEEEECCCC---CTTSCCGGGCHHHHHHCSE-EEEHHHHT-------------------
T ss_pred ccccCchhHHHHHHHHhcCCeEEEEeCccH---HHHHHHHHHcccchhhccc-eeeccccc-------------------
Confidence 456899999999999999999999999643 333444554 378888887 34443332
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 261 ~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
..||+|++ |+.+++++|++|++|+||||+.+|+++|+++||++
T Consensus 139 -----------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~t 181 (197)
T d2b0ca1 139 -----------------------MRKPEARI--------------YQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITS 181 (197)
T ss_dssp -----------------------CCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred -----------------------ccccchHH--------------HHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEE
Confidence 12666665 99999999999999999999999999999999999
Q ss_pred EEEcCCCC
Q 017067 341 VVMRSSLT 348 (378)
Q Consensus 341 i~v~~~~~ 348 (378)
|+|..+..
T Consensus 182 i~v~~~~~ 189 (197)
T d2b0ca1 182 ILVKDKTT 189 (197)
T ss_dssp EECCSTTH
T ss_pred EEECCCCC
Confidence 99987743
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=6.6e-19 Score=159.01 Aligned_cols=138 Identities=12% Similarity=0.163 Sum_probs=87.5
Q ss_pred cCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcc
Q 017067 180 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (378)
Q Consensus 180 ~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~ 259 (378)
.....++||+.++|+.|+++|++++|+|+ +....++.+++.+|++... +++++ +.....|..+ +..
T Consensus 78 ~~~~~l~pg~~~~i~~lk~~G~~~~ivS~---~~~~~v~~i~~~lgi~~~~---v~an~------~~~~~~G~~~--g~~ 143 (217)
T d1nnla_ 78 EQPPHLTPGIRELVSRLQERNVQVFLISG---GFRSIVEHVASKLNIPATN---VFANR------LKFYFNGEYA--GFD 143 (217)
T ss_dssp HSCCCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCCGGG---EEEEC------EEECTTSCEE--EEC
T ss_pred hhccccCHHHHHHHHHHHhCCCEEEEECC---CchHHHHHHHHHhCCcccc---eeeee------eeeeehhccc--cce
Confidence 34567999999999999999999999999 6689999999999997532 22211 0000011110 000
Q ss_pred hhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCC
Q 017067 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (378)
Q Consensus 260 ~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~ 339 (378)
++.|.. ++.....+ .+...+. +++++|++||||.+|+.|++.||+.
T Consensus 144 --------------------------~~~p~~---~~~~K~~~---v~~~~~~--~~~~~~~~vGDs~~Di~~~~~ag~~ 189 (217)
T d1nnla_ 144 --------------------------ETQPTA---ESGGKGKV---IKLLKEK--FHFKKIIMIGDGATDMEACPPADAF 189 (217)
T ss_dssp --------------------------TTSGGG---STTHHHHH---HHHHHHH--HCCSCEEEEESSHHHHTTTTTSSEE
T ss_pred --------------------------eeeeee---ccchHHHH---HHHHHhc--cCccccEEEEeCHhhHHHHHhCCce
Confidence 111111 11112222 3444443 4589999999999999999999986
Q ss_pred EEEEcCCCCCCCCCCCCcEEecCCCcc
Q 017067 340 CVVMRSSLTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 340 ~i~v~~~~~~~~~l~~ad~vi~~l~e~ 366 (378)
+++-.++ ........+|+++.+|.|+
T Consensus 190 va~~~~~-~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 190 IGFGGNV-IRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp EEECSSC-CCHHHHHHCSEEESCGGGG
T ss_pred EEECCCH-HHHHHHHhCCCEeCCHHHh
Confidence 5443222 1112223589999999886
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.75 E-value=7.3e-19 Score=157.71 Aligned_cols=140 Identities=14% Similarity=0.077 Sum_probs=92.3
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchh-eeechhhHHHhhhhccccccccccCcchh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI-KIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~-~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
++++||+.++|+.|+++|++++++|| +....++.+++++|+.+++-. .....+ +.+...
T Consensus 74 ~~l~pg~~~~l~~L~~~g~~~~ivS~---~~~~~i~~~l~~l~~~~~~~an~~~~~~-------------~~~~~~---- 133 (226)
T d2feaa1 74 AKIREGFREFVAFINEHEIPFYVISG---GMDFFVYPLLEGIVEKDRIYCNHASFDN-------------DYIHID---- 133 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEE---EEHHHHHHHHTTTSCGGGEEEEEEECSS-------------SBCEEE----
T ss_pred cchhHHHHHHHHHHHhcccccccCCc---chhhhHHHHHHHcCCccceeeeeEEEeC-------------Ccceec----
Confidence 56999999999999999999999999 567999999999998776521 111111 000000
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccC---CCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCC
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDID---TSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~---kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~ 338 (378)
+|.+... +|.+.. ...+++++++++++|+||||+.+|+.||++||+
T Consensus 134 ------------------------~~~~~~~~~~~~k~~~-------~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~ 182 (226)
T d2feaa1 134 ------------------------WPHSCKGTCSNQCGCC-------KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDL 182 (226)
T ss_dssp ------------------------CTTCCCTTCCSCCSSC-------HHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSE
T ss_pred ------------------------cccccccccccCCHHH-------HHHHHHHhcCCCceEEEEeCchhhHHHHHHCCE
Confidence 1111111 111221 677899999999999999999999999999996
Q ss_pred CEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHHh
Q 017067 339 PCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 339 ~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l~ 374 (378)
..+ +........+...+..+++++.|+...+..+.
T Consensus 183 ~~a-~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 217 (226)
T d2feaa1 183 CFA-RDYLLNECREQNLNHLPYQDFYEIRKEIENVK 217 (226)
T ss_dssp EEE-CHHHHHHHHHTTCCEECCSSHHHHHHHHHTSH
T ss_pred EEE-ecchHHHHHHcCCCeeecCCHHHHHHHHHHHH
Confidence 332 22111111122224567788888766665543
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=3.7e-17 Score=150.01 Aligned_cols=62 Identities=11% Similarity=0.234 Sum_probs=56.3
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCCC----CcEEecCCCcch
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFPS----ANAVMDGFGGAD 367 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~~----ad~vi~~l~e~~ 367 (378)
|+.+++++|++|++|+||||+. +||++|+++||++|+|.+|.....++.. +|++++++.|++
T Consensus 182 ~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL~ 248 (250)
T d2c4na1 182 IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred HhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHhC
Confidence 9999999999999999999997 5999999999999999999877766643 599999999986
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.75 E-value=4.4e-18 Score=166.56 Aligned_cols=144 Identities=17% Similarity=0.113 Sum_probs=107.1
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchhe-eechhhHHHhhhhccccccccccCcchhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK-IVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~-iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
+|+||+.++|+.|+++|++++++|| .....++.+++.+|+.++|+.. +++.+++...... ......
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg---~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~---~~~~~~------- 281 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATG---RPYTETVVPFENLGLLPYFEADFIATASDVLEAENM---YPQARP------- 281 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHH---STTSCC-------
T ss_pred cchhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhh---cccccc-------
Confidence 3567999999999999999999999 5579999999999999999753 4455554321100 000000
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHH--------------cCCCCCcEEEEeCCHh
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY--------------AEKPVRNCFLIAGSQS 328 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~--------------lgv~p~~~i~VGDs~~ 328 (378)
..||+|++ |..++.. +++++++|+||||+.+
T Consensus 282 ---------------------~~KP~p~~--------------~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~ 326 (380)
T d1qyia_ 282 ---------------------LGKPNPFS--------------YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLA 326 (380)
T ss_dssp ---------------------CCTTSTHH--------------HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHH
T ss_pred ---------------------ccCCChHH--------------HHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHH
Confidence 11444444 6666544 4677899999999999
Q ss_pred HHHHHHHcCCCEEEEcCCCCCCC---CC--CCCcEEecCCCcchHHHHHHhh
Q 017067 329 GVAGAQRIGMPCVVMRSSLTSRA---EF--PSANAVMDGFGGADLTISKLRH 375 (378)
Q Consensus 329 Di~aA~~aG~~~i~v~~~~~~~~---~l--~~ad~vi~~l~e~~~~~~~l~~ 375 (378)
|+.+|++||+++|+|.+|..... ++ ..||+|++++.|+...+..|.+
T Consensus 327 D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~~l~~ 378 (380)
T d1qyia_ 327 DLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLE 378 (380)
T ss_dssp HHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCTTT
T ss_pred HHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHHHHHHh
Confidence 99999999999999999876542 33 3599999999999877766654
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.74 E-value=3.8e-18 Score=150.04 Aligned_cols=74 Identities=14% Similarity=0.208 Sum_probs=62.2
Q ss_pred hhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE-EEEcCCCCCCCCCC-CCcEEec
Q 017067 284 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC-VVMRSSLTSRAEFP-SANAVMD 361 (378)
Q Consensus 284 ~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~-i~v~~~~~~~~~l~-~ad~vi~ 361 (378)
+|||+|++ +..++++++++|++|+||||+.+|+++|++||+.+ +++.++........ .||+|++
T Consensus 106 ~rKP~p~m--------------~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~ 171 (182)
T d2gmwa1 106 CRKPHPGM--------------LLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN 171 (182)
T ss_dssp SSTTSCHH--------------HHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES
T ss_pred ccCCcccc--------------ccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEEC
Confidence 45777777 99999999999999999999999999999999975 77888866554443 3899999
Q ss_pred CCCcchHHHH
Q 017067 362 GFGGADLTIS 371 (378)
Q Consensus 362 ~l~e~~~~~~ 371 (378)
++.|+...++
T Consensus 172 ~l~dl~~~ik 181 (182)
T d2gmwa1 172 SLADLPQAIK 181 (182)
T ss_dssp CGGGHHHHHH
T ss_pred CHHHHHHHhc
Confidence 9999876554
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.74 E-value=1.5e-17 Score=153.02 Aligned_cols=62 Identities=8% Similarity=0.225 Sum_probs=55.4
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHh-HHHHHHHcCCCEEEEcCCCCCCCCCCC----CcEEecCCCcch
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQS-GVAGAQRIGMPCVVMRSSLTSRAEFPS----ANAVMDGFGGAD 367 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~~-Di~aA~~aG~~~i~v~~~~~~~~~l~~----ad~vi~~l~e~~ 367 (378)
|+.+++++|++|++|+||||+.. ||++|+++||++|+|.+|....+++.. +|+++++|.|++
T Consensus 186 ~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~~ 252 (253)
T d1wvia_ 186 MNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEWD 252 (253)
T ss_dssp HHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGCC
T ss_pred ceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHcC
Confidence 99999999999999999999975 999999999999999998776655432 599999999985
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.72 E-value=2e-17 Score=151.84 Aligned_cols=62 Identities=10% Similarity=0.236 Sum_probs=54.7
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCC----CCcEEecCCCcch
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFP----SANAVMDGFGGAD 367 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~----~ad~vi~~l~e~~ 367 (378)
|..+++++|++|++|+||||+. +||++|++|||++|+|.+|.....++. .||+|+++|.|+.
T Consensus 186 ~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~~ 252 (253)
T d1yv9a1 186 MERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT 252 (253)
T ss_dssp HHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred HHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHcC
Confidence 8999999999999999999996 599999999999999999877655443 3699999999873
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.71 E-value=8.7e-18 Score=151.49 Aligned_cols=66 Identities=8% Similarity=0.125 Sum_probs=54.1
Q ss_pred hhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCC
Q 017067 284 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGF 363 (378)
Q Consensus 284 ~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l 363 (378)
+|||+|.+ +..+++++++++++|+||||+.+|+++|++|||+++++.++..... .+..+.++
T Consensus 127 ~rKP~p~m--------------l~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~~----~~~~~~~~ 188 (209)
T d2o2xa1 127 MRKPNPGM--------------LVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQ----PGFAIRPL 188 (209)
T ss_dssp TSTTSCHH--------------HHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEE----TTEEEEEE
T ss_pred cccccchh--------------hhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCccc----CCccccCc
Confidence 46888777 9999999999999999999999999999999999999988854332 45555555
Q ss_pred Ccch
Q 017067 364 GGAD 367 (378)
Q Consensus 364 ~e~~ 367 (378)
.++.
T Consensus 189 ~~~~ 192 (209)
T d2o2xa1 189 RDSS 192 (209)
T ss_dssp SSHH
T ss_pred cchh
Confidence 5543
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.71 E-value=1.4e-17 Score=153.33 Aligned_cols=64 Identities=11% Similarity=0.178 Sum_probs=55.9
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hHHHHHHHcCCCEEEEcCCCCCCCCCC----CCcEEecCCCcchHH
Q 017067 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSSLTSRAEFP----SANAVMDGFGGADLT 369 (378)
Q Consensus 306 ~~~a~~~lgv~p~~~i~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~l~----~ad~vi~~l~e~~~~ 369 (378)
|..+++++|++|++|+||||+. +||.+|+++||++|+|.+|.....++. .+|++++++.|+...
T Consensus 191 ~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~ 259 (261)
T d1vjra_ 191 VDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKA 259 (261)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHH
T ss_pred HHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHH
Confidence 8999999999999999999996 699999999999999999977654432 369999999997543
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.68 E-value=1.3e-17 Score=144.27 Aligned_cols=111 Identities=12% Similarity=0.139 Sum_probs=73.5
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCC---Cc--h-------HHHHHHHHHhCccccchheeechhhHHHhhhhcccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGK---SG--D-------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 250 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~---~~--~-------~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~ 250 (378)
+.++||+.++|+.|+++|++++++||.+. +. . ......+...|+... . ++... ++.
T Consensus 29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~-i~~~~---------~~~ 96 (161)
T d2fpwa1 29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFD--E-VLICP---------HLP 96 (161)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEE--E-EEEEC---------CCG
T ss_pred ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccc--e-eeecc---------ccc
Confidence 35899999999999999999999999530 00 0 112233344444210 0 11000 000
Q ss_pred ccccccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHH
Q 017067 251 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 330 (378)
Q Consensus 251 g~~v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di 330 (378)
.+. +..+||+|++ +..+++++|++|++|+||||+.+|+
T Consensus 97 ~~~----------------------------~~~~KP~p~~--------------~~~~~~~~~id~~~~~~IGD~~~Di 134 (161)
T d2fpwa1 97 ADE----------------------------CDCRKPKVKL--------------VERYLAEQAMDRANSYVIGDRATDI 134 (161)
T ss_dssp GGC----------------------------CSSSTTSSGG--------------GGGGC----CCGGGCEEEESSHHHH
T ss_pred ccc----------------------------ccccccccHH--------------HHHHHHhcCCChhcEEEECCCHHHH
Confidence 000 0134888888 9999999999999999999999999
Q ss_pred HHHHHcCCCEEEEcCCC
Q 017067 331 AGAQRIGMPCVVMRSSL 347 (378)
Q Consensus 331 ~aA~~aG~~~i~v~~~~ 347 (378)
++|++|||++|++.+..
T Consensus 135 ~aA~~aG~~~i~i~~~~ 151 (161)
T d2fpwa1 135 QLAENMGINGLRYDRET 151 (161)
T ss_dssp HHHHHHTSEEEECBTTT
T ss_pred HHHHHcCCeEEEECCCC
Confidence 99999999999997664
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.65 E-value=2.1e-16 Score=138.13 Aligned_cols=128 Identities=12% Similarity=0.115 Sum_probs=90.2
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhh
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~ 262 (378)
.++.+|+.++++.++.+|+.++++|+ +....+....+..+....+.......+... .
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-------- 130 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSG---GFDIAVNKIKEKLGLDYAFANRLIVKDGKL------------T-------- 130 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHTCSEEEEEEEEEETTEE------------E--------
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecc---cccccccchhhccchhhhhhhhhccccccc------------c--------
Confidence 56899999999999999999999999 557888888888888877655322221100 0
Q ss_pred hHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 263 ~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
...+.. .+...+.+.. +...++++++.++++++|||+.||+.|++.||+.+++
T Consensus 131 -----------------------~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~ 183 (210)
T d1j97a_ 131 -----------------------GDVEGE-VLKENAKGEI---LEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF 183 (210)
T ss_dssp -----------------------EEEECS-SCSTTHHHHH---HHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE
T ss_pred -----------------------cccccc-ccccccccch---hhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE
Confidence 000000 0112223333 7888999999999999999999999999999987654
Q ss_pred EcCCCCCCCCCCCCcEEecCCC
Q 017067 343 MRSSLTSRAEFPSANAVMDGFG 364 (378)
Q Consensus 343 v~~~~~~~~~l~~ad~vi~~l~ 364 (378)
++ ...-...||+|+++.+
T Consensus 184 --na--~~~lk~~Ad~vi~~~d 201 (210)
T d1j97a_ 184 --CA--KPILKEKADICIEKRD 201 (210)
T ss_dssp --SC--CHHHHTTCSEEECSSC
T ss_pred --CC--CHHHHHhCCEEEcCCC
Confidence 22 2222345899998653
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.40 E-value=1.5e-13 Score=115.26 Aligned_cols=42 Identities=19% Similarity=0.046 Sum_probs=33.4
Q ss_pred HHHHHHHcCCCCCc-EEEEeCCHhHHHHHHHcCCCEEEEcCCC
Q 017067 306 LRAGAEYAEKPVRN-CFLIAGSQSGVAGAQRIGMPCVVMRSSL 347 (378)
Q Consensus 306 ~~~a~~~lgv~p~~-~i~VGDs~~Di~aA~~aG~~~i~v~~~~ 347 (378)
....+.++..++.+ +++|||+..||+||+++|++|+.|.+|+
T Consensus 106 k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~Gd 148 (149)
T d1ltqa1 106 KEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASGD 148 (149)
T ss_dssp HHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCCC
T ss_pred HHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCCC
Confidence 34456666665555 5678999999999999999999998873
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.30 E-value=2.7e-12 Score=111.21 Aligned_cols=133 Identities=10% Similarity=0.062 Sum_probs=86.3
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchh
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~ 261 (378)
.....++...++..++ .+++.+++|. +...........+++...+........... . .
T Consensus 67 ~~~~~~~~~~~~~~~~-~~~~~~~~s~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~----~------- 124 (206)
T d1rkua_ 67 TLKPLEGAVEFVDWLR-ERFQVVILSD---TFYEFSQPLMRQLGFPTLLCHKLEIDDSDR-------V----V------- 124 (206)
T ss_dssp TCCCCTTHHHHHHHHH-TTSEEEEEEE---EEHHHHHHHHHHTTCCCEEEEEEEECTTSC-------E----E-------
T ss_pred hccccchHHHHHHHhh-cCceEEEecc---CchHHHHHHHHHhCCchhhcceeeeecccc-------c----c-------
Confidence 4678999998888765 6789999998 667888888888888766543221111000 0 0
Q ss_pred hhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEE
Q 017067 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (378)
Q Consensus 262 ~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i 341 (378)
.... +.+.. ....++.+|++++++++|||+.||+.|.+.||+..+
T Consensus 125 --------------------------~~~~--~~~~~-------~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIA 169 (206)
T d1rkua_ 125 --------------------------GYQL--RQKDP-------KRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGIL 169 (206)
T ss_dssp --------------------------EEEC--CSSSH-------HHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEE
T ss_pred --------------------------cccc--cchhh-------HHHHHHHhcccccceEEecCCccCHHHHHhCCccEE
Confidence 0000 11111 566688999999999999999999999999996655
Q ss_pred EEcCCCCCCCCCCCCcEE-ecCCCcchHHHHHHh
Q 017067 342 VMRSSLTSRAEFPSANAV-MDGFGGADLTISKLR 374 (378)
Q Consensus 342 ~v~~~~~~~~~l~~ad~v-i~~l~e~~~~~~~l~ 374 (378)
+ +.+ ..-..+.++++ ..+..|+...+.+..
T Consensus 170 m-na~--~~v~~~~~~~~~~~~~~d~~~~~~~~~ 200 (206)
T d1rkua_ 170 F-HAP--ENVIREFPQFPAVHTYEDLKREFLKAS 200 (206)
T ss_dssp E-SCC--HHHHHHCTTSCEECSHHHHHHHHHHHC
T ss_pred E-CCC--HHHHHhCCCceeecCHHHHHHHHHHHh
Confidence 5 322 11111235764 567777765555544
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.15 E-value=2.1e-10 Score=100.88 Aligned_cols=71 Identities=10% Similarity=0.129 Sum_probs=51.6
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCc--chHHHHHHh-hccC
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGG--ADLTISKLR-HSQW 378 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e--~~~~~~~l~-~~~~ 378 (378)
+++..++++|++++++++|||+.||+.|++.+|+. |.+. +....-...|++|+++..+ +...+..++ +.||
T Consensus 156 al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~-vav~--na~~~~k~~A~~v~~~~~~~gv~~~i~~~l~~~g~ 229 (230)
T d1wr8a_ 156 GIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAVA--QAPKILKENADYVTKKEYGEGGAEAIYHILEKFGY 229 (230)
T ss_dssp HHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EECT--TSCHHHHTTCSEECSSCHHHHHHHHHHHHHHHTTC
T ss_pred hhcccccccccchhheeeeecCccHHHHHHHCCeE-EEEC--CCCHHHHHhCCEEECCCCcCHHHHHHHHHHHHcCC
Confidence 38899999999999999999999999999999964 3333 3333334558999987654 333455444 4555
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.94 E-value=6.9e-10 Score=100.67 Aligned_cols=59 Identities=14% Similarity=0.020 Sum_probs=46.6
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcc
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~ 366 (378)
|++..++.++++++++++|||+.||+.|.+.+| ..+..++...+-...|++|+++..+-
T Consensus 201 al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~---~~~am~na~~~lk~~a~~i~~~~~~~ 259 (271)
T d1rkqa_ 201 GVKSLADVLGIKPEEIMAIGDQENDIAMIEYAG---VGVAVDNAIPSVKEVANFVTKSNLED 259 (271)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSS---EEEECTTSCHHHHHHCSEECCCTTTT
T ss_pred ccceehhhcccchhcEEEEeCcHhHHHHHHhCC---cEEEeCCCCHHHHHhCCEEcCCCCcC
Confidence 589999999999999999999999999999999 33343433333334589999887773
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.90 E-value=1.7e-09 Score=95.82 Aligned_cols=59 Identities=14% Similarity=-0.054 Sum_probs=45.2
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcc
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~ 366 (378)
+++..++++|++++++++|||+.||+.|++.+|+.+ .+. +..+.-...||+|++.-.+-
T Consensus 155 ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~v-av~--na~~~~k~~ad~v~~~~~~~ 213 (225)
T d1l6ra_ 155 AVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKA-CPA--NATDNIKAVSDFVSDYSYGE 213 (225)
T ss_dssp HHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEE-ECT--TSCHHHHHHCSEECSCCTTH
T ss_pred HHHHHhhhhccchhheeeecCCcchHHHHHHCCeEE-EEC--CCcHHHHHhCCEEECCCCcC
Confidence 378889999999999999999999999999999543 333 22223334589998777653
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.78 E-value=2.4e-08 Score=88.39 Aligned_cols=108 Identities=9% Similarity=0.127 Sum_probs=70.3
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHH-HHhCccccchhe-eechhhHHHhhhhccccccccccCcch
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVV-EKLGSERISKIK-IVGNEEVERSLYGQFVLGKGISSGVDE 260 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l-~~lgi~~~f~~~-iv~~~~~~~~~~~~~v~g~~v~~~~~~ 260 (378)
..+.||+.+|++.++++|+++..+||........+...+ +.+|+....... ++..+
T Consensus 85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~---------------------- 142 (209)
T d2b82a1 85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGD---------------------- 142 (209)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCC----------------------
T ss_pred cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCC----------------------
Confidence 347899999999999999999999997644444455555 447774322111 11111
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 261 ~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
+|... . -+..++++++ .+++||..+|+.+|.++|+++
T Consensus 143 -------------------------~~~K~-----~---------rr~~Ik~y~I----~l~~GD~l~Df~aA~eagi~~ 179 (209)
T d2b82a1 143 -------------------------KPGQN-----T---------KSQWLQDKNI----RIFYGDSDNDITAARDVGARG 179 (209)
T ss_dssp -------------------------CTTCC-----C---------SHHHHHHTTE----EEEEESSHHHHHHHHHTTCEE
T ss_pred -------------------------CCCch-----H---------HHHHHHHcCe----EEEecCCHHHHhHHHHcCCCc
Confidence 11000 1 1333467777 789999999999999999999
Q ss_pred EEEc-CCCCCCCCCCC
Q 017067 341 VVMR-SSLTSRAEFPS 355 (378)
Q Consensus 341 i~v~-~~~~~~~~l~~ 355 (378)
|-+- .+...-..++.
T Consensus 180 iRi~r~~~s~y~p~p~ 195 (209)
T d2b82a1 180 IRILRASNSTYKPLPQ 195 (209)
T ss_dssp EECCCCTTCSSCSCCC
T ss_pred eEeeccCCCCCCCchh
Confidence 9873 33333334443
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.78 E-value=5.4e-09 Score=97.60 Aligned_cols=49 Identities=24% Similarity=0.480 Sum_probs=43.1
Q ss_pred HHhcCCCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccc
Q 017067 177 FLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (378)
Q Consensus 177 ~l~~~~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~ 228 (378)
.+....+.++||+.++++.|+++|++++|+|+ +...++..+++.+|+..
T Consensus 128 ~v~~~~i~Lr~G~~e~~~~l~~~~i~~~IvSg---G~~~~ie~vl~~lg~~~ 176 (291)
T d2bdua1 128 IVADSDVMLKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQAGVYH 176 (291)
T ss_dssp HHHHSCCCBCBTHHHHHHHHHHHTCCEEEEEE---EEHHHHHHHHHHTTCCB
T ss_pred HHHhcCCCcccCHHHHHHHHHHcCCeEEEEcC---ChHHHHHHHHHHcCCCc
Confidence 33334678999999999999999999999999 78999999999999754
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.71 E-value=3e-08 Score=90.05 Aligned_cols=59 Identities=15% Similarity=0.027 Sum_probs=46.1
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcc
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~ 366 (378)
+++..++++|++++++++|||+.||+.|.+.+|.. |..++...+-...|++|+++..+-
T Consensus 217 ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~s---vam~na~~~~k~~A~~v~~~~~~~ 275 (285)
T d1nrwa_ 217 ALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKG---VAMGNAREDIKSIADAVTLTNDEH 275 (285)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEE---EECTTCCHHHHHHCSEECCCGGGT
T ss_pred HHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeE---EEeCCCCHHHHHhCCEEcCCCCcc
Confidence 48889999999999999999999999999999943 333333333344589999876654
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.67 E-value=3.1e-08 Score=89.78 Aligned_cols=60 Identities=10% Similarity=-0.000 Sum_probs=47.8
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
+++..++++|++++++++|||+.||+.|.+.+|. .|..++..++-...|++|+.+..+-+
T Consensus 194 ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~---sva~~na~~~~k~~A~~i~~~~~~~G 253 (267)
T d1nf2a_ 194 ALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGL---RVAMENAIEKVKEASDIVTLTNNDSG 253 (267)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSE---EEECTTSCHHHHHHCSEECCCTTTTH
T ss_pred HHHHHHHhhccCcccEEEEcCCcchHHHHHhCCc---EEEeCCCCHHHHHhCCEEcCCCCccH
Confidence 4888999999999999999999999999999995 34444444444456899999877743
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.66 E-value=1.4e-08 Score=91.80 Aligned_cols=68 Identities=6% Similarity=0.031 Sum_probs=50.5
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCc---chHHHHHHhh
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGG---ADLTISKLRH 375 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e---~~~~~~~l~~ 375 (378)
++...++.++++++++++|||+.||+.|.+.+|..++ + ++...+-...|++|+++-.+ +...++++.+
T Consensus 211 ~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va-~--~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~~ 281 (283)
T d2b30a1 211 GINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFA-V--ANATDSAKSHAKCVLPVSHREGAVAYLLKKVFD 281 (283)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEE-C--TTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred HHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEE-e--CCCCHHHHHhCCEEECCcCCCcHHHHHHHHHHc
Confidence 5889999999999999999999999999999995433 3 33333333458999976543 5555666654
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.58 E-value=1.1e-07 Score=82.85 Aligned_cols=40 Identities=5% Similarity=0.012 Sum_probs=32.1
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcC
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (378)
.+...++++|++++++++|||+.||+.|.+.+|. .|+|.+
T Consensus 191 ~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~-~vaV~n 230 (232)
T d1xvia_ 191 WIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDY-AVIVKG 230 (232)
T ss_dssp HHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSE-EEECCC
T ss_pred HHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCe-EEEEeC
Confidence 3444455679999999999999999999999996 445543
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.47 E-value=4.4e-07 Score=74.88 Aligned_cols=104 Identities=11% Similarity=0.082 Sum_probs=69.8
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhh
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~ 263 (378)
+++|++.+.|+.|++.|+++.++|+ .....+..+.+.+|+...|... ..
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTG---D~~~~a~~ia~~lgI~~v~~~~--~p-------------------------- 69 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVIAEV--LP-------------------------- 69 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEECSC--CH--------------------------
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcC---cchhhhhHHHhhhhhhhhcccc--ch--------------------------
Confidence 4899999999999999999999998 5578899999999997655331 00
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEE
Q 017067 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (378)
Q Consensus 264 ~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v 343 (378)
+. -....+++.- -..+.||||+.||..+.+.+++. +
T Consensus 70 ---------------------------------~~-------k~~~v~~~q~-~~~v~~vGDg~nD~~aL~~Advg---i 105 (135)
T d2b8ea1 70 ---------------------------------HQ-------KSEEVKKLQA-KEVVAFVGDGINDAPALAQADLG---I 105 (135)
T ss_dssp ---------------------------------HH-------HHHHHHHHTT-TSCEEEEECSSSSHHHHHHSSEE---E
T ss_pred ---------------------------------hH-------HHHHHHHHHc-CCEEEEEeCCCCcHHHHHhCCee---e
Confidence 00 0111223332 25788999999999999999954 3
Q ss_pred cCCCCCCCCCCCCcEEecC
Q 017067 344 RSSLTSRAEFPSANAVMDG 362 (378)
Q Consensus 344 ~~~~~~~~~l~~ad~vi~~ 362 (378)
..+.........||+++.+
T Consensus 106 a~~~~~~~~~~aADivl~~ 124 (135)
T d2b8ea1 106 AVGSGSDVAVESGDIVLIR 124 (135)
T ss_dssp EECCC--------SEEESS
T ss_pred ecCccCHHHHHhCCEEEEC
Confidence 3333333444568998854
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.46 E-value=8.3e-08 Score=84.22 Aligned_cols=98 Identities=18% Similarity=0.224 Sum_probs=68.3
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCC------CCch---HHHHHHHHHhCccccchheeechhhHHHhhhhccccccccc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYG------KSGD---RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 255 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~------~~~~---~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~ 255 (378)
++|+|.+.|+.|.++|+.++|+||.+ .+.. .....+++.++.... ++... .
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~~~----i~~~~----------------~ 110 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQ----VLVAT----------------H 110 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSCCE----EEEEC----------------S
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCCcc----EEEec----------------C
Confidence 57999999999999999999999963 0000 112333444443211 11000 0
Q ss_pred cCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcC----CCCCcEEEEeCCH----
Q 017067 256 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGSQ---- 327 (378)
Q Consensus 256 ~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lg----v~p~~~i~VGDs~---- 327 (378)
. ..+|||.|+| +..+++.+. ++.++++||||..
T Consensus 111 ~-------------------------~~~RKP~~GM--------------~~~~~~~~n~~~~id~~~S~~IGD~~gr~~ 151 (195)
T d1yj5a1 111 A-------------------------GLNRKPVSGM--------------WDHLQEQANEGIPISVEDSVFVGDAAGRLA 151 (195)
T ss_dssp S-------------------------SSSSTTSTHH--------------HHHHHHTSSSSCCCCGGGCEEECSCCCBCT
T ss_pred c-------------------------cccCCCccHH--------------HHHHHHHhcccccCCcCceEEEeCccCccc
Confidence 0 1257988888 888998874 8899999999954
Q ss_pred -------------hHHHHHHHcCCCEE
Q 017067 328 -------------SGVAGAQRIGMPCV 341 (378)
Q Consensus 328 -------------~Di~aA~~aG~~~i 341 (378)
+|++.|.++|++..
T Consensus 152 ~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 152 NWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp TSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred cccccccccCcchhHHHHHHHCCCccc
Confidence 89999999999965
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.36 E-value=4.8e-06 Score=71.87 Aligned_cols=46 Identities=7% Similarity=0.121 Sum_probs=39.3
Q ss_pred EEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcc
Q 017067 321 FLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGA 366 (378)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~ 366 (378)
++|+|++.++.++..+|+.+|++..++......+..-..+.+..|+
T Consensus 140 ~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~~W~e~ 185 (195)
T d1q92a_ 140 LLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADD 185 (195)
T ss_dssp EEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSC
T ss_pred EEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeCCHHHH
Confidence 8999999999999999999999998887765555556788999886
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.22 E-value=8.9e-07 Score=77.67 Aligned_cols=37 Identities=5% Similarity=0.042 Sum_probs=31.4
Q ss_pred HHHHHHHcC-CCCCcEEEEeCCHhHHHHHHHcCCCEEE
Q 017067 306 LRAGAEYAE-KPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (378)
Q Consensus 306 ~~~a~~~lg-v~p~~~i~VGDs~~Di~aA~~aG~~~i~ 342 (378)
....++.++ +.++++++|||+.||+.|.+.+|..+++
T Consensus 184 l~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~ 221 (243)
T d1wzca1 184 AKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV 221 (243)
T ss_dssp HHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE
T ss_pred HHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEe
Confidence 677788885 8899999999999999999999944333
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.20 E-value=3.3e-06 Score=72.56 Aligned_cols=104 Identities=15% Similarity=0.121 Sum_probs=78.9
Q ss_pred HHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHHHhh
Q 017067 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (378)
Q Consensus 192 lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~ka~~ 271 (378)
.|..|+..|+.++++|.. ....+......+++...+.... +
T Consensus 40 gi~~l~~~gi~~~iis~~---~~~~v~~~~~~l~~~~~~~~~~----~-------------------------------- 80 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSGR---DSPILRRRIADLGIKLFFLGKL----E-------------------------------- 80 (177)
T ss_dssp HHHHHHHTTCEEEEEESC---CCHHHHHHHHHHTCCEEEESCS----C--------------------------------
T ss_pred HHHHHhhhcEEEEEecCC---chhHHHHHHhhhcccccccccc----c--------------------------------
Confidence 467888999999999994 4577888888888876553210 0
Q ss_pred HHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCC
Q 017067 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRA 351 (378)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ 351 (378)
+ . .+++..++++++++++|+||||..||+.+.+.+|+ .+...+....
T Consensus 81 -------------------------K--~---~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~---siap~nA~~~ 127 (177)
T d1k1ea_ 81 -------------------------K--E---TACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGT---SFAVADAPIY 127 (177)
T ss_dssp -------------------------H--H---HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE---EEECTTSCHH
T ss_pred -------------------------H--H---HHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCe---EEEcCCccHH
Confidence 0 0 12778899999999999999999999999999994 4444544555
Q ss_pred CCCCCcEEecCCCcch
Q 017067 352 EFPSANAVMDGFGGAD 367 (378)
Q Consensus 352 ~l~~ad~vi~~l~e~~ 367 (378)
-...|++|.+.-++-+
T Consensus 128 vk~~A~~Vt~~~GG~G 143 (177)
T d1k1ea_ 128 VKNAVDHVLSTHGGKG 143 (177)
T ss_dssp HHTTSSEECSSCTTTT
T ss_pred HHHhCCEEeCCCCCCc
Confidence 5567899999877644
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.12 E-value=7.6e-07 Score=78.99 Aligned_cols=40 Identities=10% Similarity=0.031 Sum_probs=34.3
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcC
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (378)
+.+..++++|++++++++|||+.||+.|.+.+|.. |.+.+
T Consensus 166 a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~-vav~n 205 (244)
T d1s2oa1 166 ATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARG-VIVRN 205 (244)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEE-EECTT
T ss_pred HHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcE-EEeCC
Confidence 37888999999999999999999999999999943 34443
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.09 E-value=5.4e-06 Score=70.62 Aligned_cols=133 Identities=11% Similarity=0.150 Sum_probs=80.2
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccch---heeechhhHHHhhhhccccccccccCcch
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK---IKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~---~~iv~~~~~~~~~~~~~v~g~~v~~~~~~ 260 (378)
|++|++.+.|+.|++.|+++.++|+ .....+..+.+.+|+...-. ...+..++......
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTG---D~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~--------------- 81 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITG---DNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPL--------------- 81 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCH---------------
T ss_pred CCchhHHHHHHHHHHCcCEEEEECC---CCHHHHHHHHHHcCCCCCccccccccccccccchhhH---------------
Confidence 6899999999999999999999999 55788999999999843211 11223333322110
Q ss_pred hhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCE
Q 017067 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (378)
Q Consensus 261 ~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~ 340 (378)
.+..++.+++.. +..-.|+.... +-..+++.| ..+.|+||+.||..+.+.|.
T Consensus 82 -----------~~~~~~~~~~~v-------~ar~~p~~K~~----lv~~l~~~g---~~Va~vGDG~nD~~AL~~Ad--- 133 (168)
T d1wpga2 82 -----------AEQREACRRACC-------FARVEPSHKSK----IVEYLQSYD---EITAMTGDGVNDAPALKKAE--- 133 (168)
T ss_dssp -----------HHHHHHHHHCCE-------EESCCHHHHHH----HHHHHHHTT---CCEEEEECSGGGHHHHHHSS---
T ss_pred -----------HHHhhhhhhhhh-------hhccchhHHHH----HHHHHHhcc---cceeEEecCCCCHHHHHhCC---
Confidence 011111111110 10011222111 344455655 57899999999999999999
Q ss_pred EEEcCCCCCCCCCCCCcEEecC
Q 017067 341 VVMRSSLTSRAEFPSANAVMDG 362 (378)
Q Consensus 341 i~v~~~~~~~~~l~~ad~vi~~ 362 (378)
+++.-+.........||+|+.+
T Consensus 134 vGIa~~~gt~~a~~aAdivl~~ 155 (168)
T d1wpga2 134 IGIAMGSGTAVAKTASEMVLAD 155 (168)
T ss_dssp EEEEETTSCHHHHHTCSEEETT
T ss_pred EEEEeccccHHHHHhCCEEEcc
Confidence 4444343333333458988776
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=97.71 E-value=1.3e-05 Score=71.55 Aligned_cols=71 Identities=10% Similarity=-0.034 Sum_probs=54.9
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCc--chHHHHHHhhccC
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGG--ADLTISKLRHSQW 378 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e--~~~~~~~l~~~~~ 378 (378)
+++..++++|++++++++|||+.||+.|.+.+|.. |..++..+.-...|++|+.+..+ +-..+.+|+.+.|
T Consensus 194 al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~---vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~l~~~~ 266 (269)
T d1rlma_ 194 GISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYS---FAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTY 266 (269)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEE---EECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHTCT
T ss_pred HHHHHhhhhccccccEEEEcCCcchHHHHHhCCeE---EEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHhcCC
Confidence 48889999999999999999999999999999944 44443333334558999988776 4455778877654
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.18 E-value=0.00015 Score=64.39 Aligned_cols=60 Identities=7% Similarity=0.026 Sum_probs=46.6
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcch
Q 017067 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGAD 367 (378)
Q Consensus 305 a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~ 367 (378)
|++..++++|++++++++|||+.||+.|.+.+|.. |.+.++ ...-...|++|..+..+-+
T Consensus 190 al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~s-vav~na--~~~lk~~A~~vt~~~~~~G 249 (260)
T d2rbka1 190 GIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIG-VAMGQA--KEDVKAAADYVTAPIDEDG 249 (260)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTS--CHHHHHHSSEECCCGGGTH
T ss_pred HHHHHHHhccccHhheeEecCCcccHHHHHhCCeE-EEeCCC--CHHHHHhCCEEeCCCCccH
Confidence 48899999999999999999999999999999964 444433 2233345889988776643
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=97.07 E-value=0.00038 Score=67.53 Aligned_cols=131 Identities=7% Similarity=-0.020 Sum_probs=80.4
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHH-h--------CccccchheeechhhHHHhhhhccccccc
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-L--------GSERISKIKIVGNEEVERSLYGQFVLGKG 253 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~-l--------gi~~~f~~~iv~~~~~~~~~~~~~v~g~~ 253 (378)
+..-|.+..+|..|++.|-++-++||+. -.++...++. + .|.++||++|+.+.- . +.|+.-...-.
T Consensus 184 v~k~~~l~~~L~~lr~~GKklFLiTNS~---~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~K-P-~FF~~~~~~~~ 258 (458)
T d2bdea1 184 VIREKEVVEGLKHFIRYGKKIFILTNSE---YSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANK-P-RFFYDNLRFLS 258 (458)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSC---HHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCH-H-HHHHSCCCEEE
T ss_pred hcCChhHHHHHHHHHHcCCeEEEEecCc---HHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCC-C-CccCCCCcceE
Confidence 3357889999999999999999999954 5777777764 5 678999996665532 2 34432111111
Q ss_pred cccCcchhhhHHHHHHhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hHHHH
Q 017067 254 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAG 332 (378)
Q Consensus 254 v~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~-~Di~a 332 (378)
|....+ .+. +.. ...||.... ... .....+.+|..-.++++|||+. .||..
T Consensus 259 v~~~~g-~l~----~~~------------~~~~~~vY~-----gGn------~~~l~~llg~~g~~VLY~GDhi~~Di~~ 310 (458)
T d2bdea1 259 VNPENG-TMT----NVH------------GPIVPGVYQ-----GGN------AKKFTEDLGVGGDEILYIGDHIYGDILR 310 (458)
T ss_dssp ECTTTC-CEE----ECC------------SCCCSEEEE-----ECC------HHHHHHHTTCCGGGEEEEESSCCSCHHH
T ss_pred EeCCCC-ccc----cCC------------ccccCCccc-----cCC------HHHHHHHhCCCCCcEEEECCccchhhhh
Confidence 100000 000 000 000111000 011 5666788899999999999997 69777
Q ss_pred HH-HcCCCEEEEcCC
Q 017067 333 AQ-RIGMPCVVMRSS 346 (378)
Q Consensus 333 A~-~aG~~~i~v~~~ 346 (378)
++ ..||+|+.|-.-
T Consensus 311 ~kk~~gWrT~~Ii~E 325 (458)
T d2bdea1 311 LKKDCNWRTALVVEE 325 (458)
T ss_dssp HHHHHCSEEEEECTT
T ss_pred hhhhcCCceEEehHH
Confidence 75 679999987533
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=95.67 E-value=0.003 Score=53.41 Aligned_cols=53 Identities=6% Similarity=0.003 Sum_probs=39.3
Q ss_pred CCcEEEEeCCHhHHHHHHHcCCCEEEEcCCCCCCCCCCCCcEEecCCCcchHHHHHHh
Q 017067 317 VRNCFLIAGSQSGVAGAQRIGMPCVVMRSSLTSRAEFPSANAVMDGFGGADLTISKLR 374 (378)
Q Consensus 317 p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~l~~ad~vi~~l~e~~~~~~~l~ 374 (378)
.+++++|||+.||+.|.+.+|.. +.|..+.. -..|++++++..|+...++.|.
T Consensus 170 ~~~~i~~GDs~ND~~Mf~~~~~~-~av~~g~~----~~~A~~~~~~~~ev~~~l~~l~ 222 (229)
T d1u02a_ 170 ERPAIIAGDDATDEAAFEANDDA-LTIKVGEG----ETHAKFHVADYIEMRKILKFIE 222 (229)
T ss_dssp TSCEEEEESSHHHHHHHHTTTTS-EEEEESSS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred cccceeecCCCChHHHHhccCCe-EEEEeCCC----CccCeEEcCCHHHHHHHHHHHH
Confidence 47899999999999999999764 33333321 2358999999999766666653
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.00 E-value=0.0052 Score=52.12 Aligned_cols=34 Identities=0% Similarity=-0.066 Sum_probs=27.4
Q ss_pred cCCCCCcEEEEeC----CHhHHHHHHHcCCCEEEEcCC
Q 017067 313 AEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 313 lgv~p~~~i~VGD----s~~Di~aA~~aG~~~i~v~~~ 346 (378)
++.+++++++||| +.||++|.+.+|...+.|.++
T Consensus 194 ~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~ 231 (243)
T d2amya1 194 ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAP 231 (243)
T ss_dssp TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSH
T ss_pred hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCH
Confidence 4678999999999 779999999999767766654
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.21 E-value=0.017 Score=48.59 Aligned_cols=48 Identities=19% Similarity=0.236 Sum_probs=41.0
Q ss_pred CCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchhee
Q 017067 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 234 (378)
Q Consensus 183 ~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~i 234 (378)
+..+||+.++|+.+.+. +.++|.|.+ ....++.+++.+.+...+....
T Consensus 54 v~~RP~l~eFL~~l~~~-yei~I~Ta~---~~~YA~~il~~ldp~~~~~~~~ 101 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGEL-FECVLFTAS---LAKYADPVADLLDKWGAFRARL 101 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSS---CHHHHHHHHHHHCSSCCEEEEE
T ss_pred EecCCCHHHHHHHHHhc-eEEEEEcCC---cHHHHHHHHHHhccCCceeEEE
Confidence 45899999999999887 999999994 5799999999999877765543
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.75 E-value=2.3 Score=37.02 Aligned_cols=42 Identities=17% Similarity=0.232 Sum_probs=37.0
Q ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc
Q 017067 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (378)
Q Consensus 182 ~~~~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~ 227 (378)
.+.+.||+.+.|+.+... .+.+|+|. ++...++++....|+.
T Consensus 79 ~~~lvpgA~~~lk~l~~~-m~~yIvST---SY~qyi~al~~~~gfp 120 (308)
T d1y8aa1 79 SAKFVPDAEKAMATLQER-WTPVVIST---SYTQYLRRTASMIGVR 120 (308)
T ss_dssp HCCBCTTHHHHHHHHHTT-CEEEEEEE---EEHHHHHHHHHHTTCC
T ss_pred ceeecCCHHHHHHHHHhh-CCcEEEec---cHHHHHHHHHhhcCCC
Confidence 467999999999999987 88889988 6789999999999984
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.44 E-value=0.026 Score=47.32 Aligned_cols=33 Identities=3% Similarity=-0.100 Sum_probs=28.1
Q ss_pred CCCCCcEEEEeCC----HhHHHHHHHcCCCEEEEcCC
Q 017067 314 EKPVRNCFLIAGS----QSGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 314 gv~p~~~i~VGDs----~~Di~aA~~aG~~~i~v~~~ 346 (378)
+.+++++++|||+ .||++|.+.+|...+.|.++
T Consensus 195 ~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na 231 (244)
T d2fuea1 195 QDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSP 231 (244)
T ss_dssp TSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSH
T ss_pred cCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCH
Confidence 4589999999997 59999999999777777655
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=91.80 E-value=0.033 Score=48.42 Aligned_cols=15 Identities=33% Similarity=0.580 Sum_probs=13.1
Q ss_pred cEEEEeccccccccc
Q 017067 85 LAVLLEVDGVLVDAY 99 (378)
Q Consensus 85 kaviFDlDGTLid~~ 99 (378)
|+|+||+||||++.+
T Consensus 2 k~if~DlDGTL~~~~ 16 (260)
T d2rbka1 2 KALFFDIDGTLVSFE 16 (260)
T ss_dssp CEEEECSBTTTBCTT
T ss_pred eEEEEECCCCCcCCC
Confidence 789999999999753
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=91.21 E-value=0.054 Score=46.92 Aligned_cols=17 Identities=12% Similarity=0.403 Sum_probs=14.5
Q ss_pred ccEEEEecccccccccc
Q 017067 84 DLAVLLEVDGVLVDAYR 100 (378)
Q Consensus 84 ~kaviFDlDGTLid~~~ 100 (378)
+|+|+||+||||++...
T Consensus 2 IKli~~DlDGTLl~~~~ 18 (269)
T d1rlma_ 2 VKVIVTDMDGTFLNDAK 18 (269)
T ss_dssp CCEEEECCCCCCSCTTS
T ss_pred EEEEEEeCCccCcCCCC
Confidence 68999999999997543
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.45 E-value=0.089 Score=43.79 Aligned_cols=28 Identities=32% Similarity=0.364 Sum_probs=17.6
Q ss_pred EEEEecccccccccccchHHHHHHHHHHc
Q 017067 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKL 114 (378)
Q Consensus 86 aviFDlDGTLid~~~~~~~~a~~~~~~~~ 114 (378)
.++||+||||++.... ......++++++
T Consensus 3 i~lFDlDGTLl~~~~~-is~~~~~~i~~l 30 (244)
T d2fuea1 3 LCLFDVDGTLTPARQK-IDPEVAAFLQKL 30 (244)
T ss_dssp EEEEESBTTTBSTTSC-CCHHHHHHHHHH
T ss_pred EEEEccccCccCCCCc-CCHHHHHHHHHH
Confidence 3568999999987653 333344444443
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.08 E-value=0.039 Score=46.30 Aligned_cols=30 Identities=23% Similarity=0.276 Sum_probs=20.1
Q ss_pred CccEEEEecccccccccccchHHHHHHHHHH
Q 017067 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQK 113 (378)
Q Consensus 83 ~~kaviFDlDGTLid~~~~~~~~a~~~~~~~ 113 (378)
.+|.++||+||||++.... ..+...+++++
T Consensus 2 ~~kl~~fDlDGTLl~~~~~-i~~~~~~al~~ 31 (243)
T d2amya1 2 GPALCLFDVDGTLTAPRQK-ITKEMDDFLQK 31 (243)
T ss_dssp CSEEEEEESBTTTBCTTSC-CCHHHHHHHHH
T ss_pred CCEEEEEcCcCCeeCCCCc-CCHHHHHHHHH
Confidence 4689999999999986543 23333444444
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=89.73 E-value=0.07 Score=44.35 Aligned_cols=12 Identities=42% Similarity=0.764 Sum_probs=11.0
Q ss_pred EEEEeccccccc
Q 017067 86 AVLLEVDGVLVD 97 (378)
Q Consensus 86 aviFDlDGTLid 97 (378)
.|+||+||||++
T Consensus 2 Li~~DlDGTL~~ 13 (229)
T d1u02a_ 2 LIFLDYDGTLVP 13 (229)
T ss_dssp EEEEECBTTTBC
T ss_pred EEEEEecCCCCC
Confidence 589999999996
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=87.73 E-value=0.19 Score=39.23 Aligned_cols=43 Identities=16% Similarity=-0.069 Sum_probs=32.9
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCcc
Q 017067 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (378)
Q Consensus 185 ~~pgv~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~ 227 (378)
|.|++.++|+.|+++|+.+.+.|+.+..........+++.|+.
T Consensus 22 Pi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~ 64 (122)
T d2obba1 22 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 64 (122)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC
Confidence 7899999999999999999999996432234455666666653
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=84.70 E-value=0.14 Score=42.64 Aligned_cols=18 Identities=39% Similarity=0.460 Sum_probs=15.3
Q ss_pred CCccEEEEeccccccccc
Q 017067 82 PRDLAVLLEVDGVLVDAY 99 (378)
Q Consensus 82 ~~~kaviFDlDGTLid~~ 99 (378)
..+|+++||+||||+|..
T Consensus 3 ~~ik~~i~DvDGVlTDG~ 20 (177)
T d1k1ea_ 3 ENIKFVITDVDGVLTDGQ 20 (177)
T ss_dssp GGCCEEEEECTTTTSCSE
T ss_pred ccCeEEEEccCCcccCCe
Confidence 457899999999999853
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=82.90 E-value=0.22 Score=39.02 Aligned_cols=27 Identities=19% Similarity=0.174 Sum_probs=24.3
Q ss_pred CCCCCHHHHHHHHHHCCCcEEEEeCCC
Q 017067 184 PLRPGVEDFVDDAYNEGIPLIVLTAYG 210 (378)
Q Consensus 184 ~~~pgv~~lL~~Lk~~G~~v~ivTn~~ 210 (378)
.|.+++.+.|..|++.|+.+.|.|+..
T Consensus 24 ~P~~~~Ie~l~~l~~~G~~Iii~TaR~ 50 (124)
T d1xpja_ 24 LPRLDVIEQLREYHQLGFEIVISTARN 50 (124)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecCC
Confidence 378889999999999999999999953
|
| >d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: PrpR receptor domain-like family: PrpR receptor domain-like domain: Propionate catabolism operon regulatory protein PrpR species: Escherichia coli [TaxId: 562]
Probab=82.74 E-value=1.8 Score=35.88 Aligned_cols=87 Identities=11% Similarity=0.032 Sum_probs=56.0
Q ss_pred HHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHHHhCccccchheeechhhHHHhhhhccccccccccCcchhhhHHHHH
Q 017067 189 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARK 268 (378)
Q Consensus 189 v~~lL~~Lk~~G~~v~ivTn~~~~~~~~~~~~l~~lgi~~~f~~~iv~~~~~~~~~~~~~v~g~~v~~~~~~~~~~~~~k 268 (378)
+.+.|..+++.+-++++++..+ .....+.+.+.++++-.+-. +.+.++.+.
T Consensus 83 il~al~~a~~~~~kiavV~~~~--~~~~~~~~~~ll~~~i~~~~-~~~~~e~~~-------------------------- 133 (186)
T d2pjua1 83 VLQFLAKAGKLTSSIGVVTYQE--TIPALVAFQKTFNLRLDQRS-YITEEDARG-------------------------- 133 (186)
T ss_dssp HHHHHHHTTCTTSCEEEEEESS--CCHHHHHHHHHHTCCEEEEE-ESSHHHHHH--------------------------
T ss_pred HHHHHHHHHHhCCCEEEEeCCc--cchHHHHHHHHhCCceEEEE-ecCHHHHHH--------------------------
Confidence 3444555556678999998753 35667777888887533221 223333322
Q ss_pred HhhHHHHHHHHHHHhhhccccccCCCCcchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhHHHHHHHcCCCEEEEcCC
Q 017067 269 AVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSS 346 (378)
Q Consensus 269 a~~~~~~~~~~~~~~~~KP~p~i~kp~p~~~~~~~~a~~~a~~~lgv~p~~~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (378)
....++.-|++ ++|||... ...|++.||+.+++.++
T Consensus 134 -------------------------------------~v~~l~~~G~~----vVVG~~~~-~~~A~~~Gl~~vli~S~ 169 (186)
T d2pjua1 134 -------------------------------------QINELKANGTE----AVVGAGLI-TDLAEEAGMTGIFIYSA 169 (186)
T ss_dssp -------------------------------------HHHHHHHTTCC----EEEESHHH-HHHHHHTTSEEEESSCH
T ss_pred -------------------------------------HHHHHHHCCCC----EEECChHH-HHHHHHcCCCEEEEeCH
Confidence 22335666654 67999854 57889999999998765
|