Citrus Sinensis ID: 017070

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
MAHSAVSQVAVAVPVGTDSTLRSAPLFKTQNLRLGEKSWAPVLSLDLKSRNPRLRNRYVVCMSVQQASKSKVAVSPLELEERSQPPLNLYKPKEPYTATIVSVERVVGAKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGNPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPESGKEDPSKSGICSNFLCNSKPGDKVLITGPSGKIMLLPEDNPNATHIMIATGTGIAPFRGYLRRMFMESVPTYKFGGLAWLFLGVANPDSLLYDDEFTKYLQDYPDNFRYDKALSREQKNKKGGKMYVQDKIEEYSDEIFKRLDGGAHIYFCGLKGMMPGIQETLKRVAEQRGESWDQKLSQLKKNKQWHVEVY
ccccccccEEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccEEccccccccccccccccEEcccccccHHHHHHHHHHHHcccccHHHHHHHHcccccccccccccccccccccccccccccccccEEEcccccccccccccEEEEEEEEEEEEcccccccccccEEEccccccccccccEEEEEEEcccccccccccccccEEEEEcccccHHHHHHHHHHHHcccccccccccEEEEEccccccccccHHHHHHHHHHccccEEEEEEEccccccccccccHHHHHHHHcHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHcccEEEEcc
ccHHHHHEEEEEccccccccccEEEEccccEEEEccccccccccccccccHHHHcccccccccccccccccccccccccHHccccccccEEccEcEEEEEEEEEEcccccccccEEEEEEEcccccccccccEEEEccccEcHHccccEcccEEEEEccccccccccccEEEEEEEccEEcccccccccccEEcHHHHHHHccccccEEEEEEEEcccccccEcccccEEEEEEEHHHHHHHHHHHHHHHcccEccEccccEEEEEEEEccHHHcccHHHHHHHHHHccccEEEEEEEccccEcccccEccHHHHHHccHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHccccccHHHHHHHHHHcccEEEEEc
MAHSAVSQVAVAvpvgtdstlrsaplfktqnlrlgekswapVLSLdlksrnprlrnRYVVCMSVQqaskskvavspleleersqpplnlykpkepytaTIVSVERvvgakapgetCHIVIdhggnvpywegqsygvippgenpkkpgnphnvrlysiastrygdsfdgktasLCVRRavyydpesgkedpsksgicsnflcnskpgdkvlitgpsgkimllpednpnaTHIMIATGTGIAPFRGYLRRMfmesvptykfggLAWLFLgvanpdsllyddEFTKYLQdypdnfrydkALSREqknkkggkmyVQDKIEEYSDEIFKRLDGGAHIYfcglkgmmpGIQETLKRVAEQRGESWDQKLSQLKKNKQWHVEVY
mahsavsqvavavpvgtdstlrsaplfktqnlrlgekswapvlsldlksrnprlRNRYVVCMSVqqaskskvavspleleersqpplnlykpkepYTATIVSVERVVGAKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGNPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDpesgkedpsksgicSNFLCNSKPGDKVLITGPSGKIMLLPEDNPNATHIMIATGTGIAPFRGYLRRMFMESVPTYKFGGLAWLFLGVANPDSLLYDDEFTKYLQDYPDNFRYDKalsreqknkkggkmyvqDKIEEYSDEIFKRLDGGAHIYFCGLKGMMPGIQETLKRVAEQRGEswdqklsqlkknkqwhvevy
MahsavsqvavavpvGTDSTLRSAPLFKTQNLRLGEKSWAPVLSLDLKSRNPRLRNRYVVCMSVQQASKSKVAVSPLELEERSQPPLNLYKPKEPYTATIVSVERVVGAKAPGETCHIVIDHGGNVPYWEGQSYGVIppgenpkkpgnpHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPESGKEDPSKSGICSNFLCNSKPGDKVLITGPSGKIMLLPEDNPNATHIMIATGTGIAPFRGYLRRMFMESVPTYKFGGLAWLFLGVANPDSLLYDDEFTKYLQDYPDNFRYDKALSREQKNKKGGKMYVQDKIEEYSDEIFKRLDGGAHIYFCGLKGMMPGIQETLKRVAEQRGESWDQKLSQLKKNKQWHVEVY
**********VAVPVG****LRSAPLFKTQNLRLGEKSWAPVLSLDLKSRNPRLRNRYVVCMSV*****************************EPYTATIVSVERVVGAKAPGETCHIVIDHGGNVPYWEGQSYGVI**************VRLYSIASTRYGDSFDGKTASLCVRRAVYYD************ICSNFLCNSKPGDKVLITGPSGKIMLLPEDNPNATHIMIATGTGIAPFRGYLRRMFMESVPTYKFGGLAWLFLGVANPDSLLYDDEFTKYLQDYPDNFRYDK*************MYVQDKIEEYSDEIFKRLDGGAHIYFCGLKGMMPGIQETL*****************************
******S*****************************KSWAPVLSLDLKSRNPRLRNRYVVCMS****************EERSQPPLNLYKPKEPYTATIVSVERVVGAKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGNPHNVRLYSIAST*******GKTASLCVRRAVYYDPESGKEDPSKSGICSNFLCNSKPGDKVLITGPSGKIMLLPEDNPNATHIMIATGTGIAPFRGYLRRMFME*****KFGGLAWLFLGVANPDSLLYDDEFTKYLQDYPDNFRYDKALSREQKNKKGGKMYVQDKIEEYSDEIFKRLDGGAHIYFCGLKGMMPGIQETLKRVAEQRGESWDQKLSQLKKNKQWHVEVY
*********AVAVPVGTDSTLRSAPLFKTQNLRLGEKSWAPVLSLDLKSRNPRLRNRYVVCMSVQQASKSKVAVSPLELEERSQPPLNLYKPKEPYTATIVSVERVVGAKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGNPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYD**********SGICSNFLCNSKPGDKVLITGPSGKIMLLPEDNPNATHIMIATGTGIAPFRGYLRRMFMESVPTYKFGGLAWLFLGVANPDSLLYDDEFTKYLQDYPDNFRYDKALSREQKNKKGGKMYVQDKIEEYSDEIFKRLDGGAHIYFCGLKGMMPGIQETLKRVAEQRGESWDQKLSQLKKNKQWHVEVY
*AHSAVSQVAVAVPVGTDSTLRSAPLFKTQNLRLGEKSWAPVLSLDLKS*********************************SQPPLNLYKPKEPYTATIVSVERVVGAKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGNPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPESGKEDPSKSGICSNFLCNSKPGDKVLITGPSGKIMLLPEDNPNATHIMIATGTGIAPFRGYLRRMFMESVPTYKFGGLAWLFLGVANPDSLLYDDEFTKYLQDYPDNFRYDKALSREQKNKKGGKMYVQDKIEEYSDEIFKRLDGGAHIYFCGLKGMMPGIQETLKRVAEQRGESWDQKLSQLKKNKQWHVEVY
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAHSAVSQVAVAVPVGTDSTLRSAPLFKTQNLRLGEKSWAPVLSLDLKSRNPRLRNRYVVCMSVQQASKSKVAVSPLELEERSQPPLNLYKPKEPYTATIVSVERVVGAKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGNPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPESGKEDPSKSGICSNFLCNSKPGDKVLITGPSGKIMLLPEDNPNATHIMIATGTGIAPFRGYLRRMFMESVPTYKFGGLAWLFLGVANPDSLLYDDEFTKYLQDYPDNFRYDKALSREQKNKKGGKMYVQDKIEEYSDEIFKRLDGGAHIYFCGLKGMMPGIQETLKRVAEQRGESWDQKLSQLKKNKQWHVEVY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query378 2.2.26 [Sep-21-2011]
Q41014377 Ferredoxin--NADP reductas N/A no 0.997 1.0 0.820 0.0
P41345378 Ferredoxin--NADP reductas yes no 0.997 0.997 0.804 0.0
O04397375 Ferredoxin--NADP reductas N/A no 0.989 0.997 0.817 0.0
O23877378 Ferredoxin--NADP reductas no no 0.997 0.997 0.799 1e-180
Q9M0V6378 Ferredoxin--NADP reductas yes no 0.994 0.994 0.778 1e-179
Q9S9P8382 Ferredoxin--NADP reductas no no 1.0 0.989 0.774 1e-174
P53991354 Ferredoxin--NADP reductas N/A no 0.865 0.923 0.570 1e-110
Q00598363 Ferredoxin--NADP reductas N/A no 0.798 0.831 0.503 7e-87
P31973402 Ferredoxin--NADP reductas yes no 0.759 0.713 0.506 4e-78
Q8W493369 Ferredoxin--NADP reductas no no 0.753 0.772 0.508 9e-78
>sp|Q41014|FENR2_PEA Ferredoxin--NADP reductase, root isozyme, chloroplastic OS=Pisum sativum PE=2 SV=2 Back     alignment and function desciption
 Score =  659 bits (1700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/378 (82%), Positives = 346/378 (91%), Gaps = 1/378 (0%)

Query: 1   MAHSAVSQVAVAVPVGTDSTLRSAPLFKTQNLRLGEKSWAPVLSLDLKSRNPRLRNRYVV 60
           M+H AVSQ+AV VPV +D ++R +  FK+ NL   +KSWAPV +L +K++N   RN  V+
Sbjct: 1   MSHLAVSQMAVTVPVSSDFSVRRS-AFKSSNLNFRDKSWAPVFTLGMKAKNCGWRNHNVI 59

Query: 61  CMSVQQASKSKVAVSPLELEERSQPPLNLYKPKEPYTATIVSVERVVGAKAPGETCHIVI 120
           CMSVQQAS  KV VSPLELE  S+PPLNL+KPKEPYTATIVSVER+VG KAPGETCHIVI
Sbjct: 60  CMSVQQASVPKVTVSPLELENPSEPPLNLHKPKEPYTATIVSVERLVGPKAPGETCHIVI 119

Query: 121 DHGGNVPYWEGQSYGVIPPGENPKKPGNPHNVRLYSIASTRYGDSFDGKTASLCVRRAVY 180
           +H GNVPYWEGQSYGVIPPGENPKKPG+PHNVRLYSIASTRYGD+FDGKTASLCVRRAVY
Sbjct: 120 NHDGNVPYWEGQSYGVIPPGENPKKPGSPHNVRLYSIASTRYGDNFDGKTASLCVRRAVY 179

Query: 181 YDPESGKEDPSKSGICSNFLCNSKPGDKVLITGPSGKIMLLPEDNPNATHIMIATGTGIA 240
           YDP +GKEDPSK+G+CSNFLC+SKPGDK+ I GPSGKIMLLPED+PNATHIMIATGTG+A
Sbjct: 180 YDPVTGKEDPSKNGVCSNFLCDSKPGDKIKIAGPSGKIMLLPEDDPNATHIMIATGTGVA 239

Query: 241 PFRGYLRRMFMESVPTYKFGGLAWLFLGVANPDSLLYDDEFTKYLQDYPDNFRYDKALSR 300
           P+RGYLRRMFMESVPT+KFGGLAWLFLGVAN DSLLYDDEFTKYL+DYPDNFRY++ALSR
Sbjct: 240 PYRGYLRRMFMESVPTFKFGGLAWLFLGVANVDSLLYDDEFTKYLKDYPDNFRYNRALSR 299

Query: 301 EQKNKKGGKMYVQDKIEEYSDEIFKRLDGGAHIYFCGLKGMMPGIQETLKRVAEQRGESW 360
           E+KNK GGKMYVQDKIEEYSDEIFK LD GAHIYFCGL+GMMPGIQETLKRVAE+RGESW
Sbjct: 300 EEKNKNGGKMYVQDKIEEYSDEIFKLLDNGAHIYFCGLRGMMPGIQETLKRVAEKRGESW 359

Query: 361 DQKLSQLKKNKQWHVEVY 378
           ++KLSQLKKNKQWHVEVY
Sbjct: 360 EEKLSQLKKNKQWHVEVY 377
May play a key role in regulating the relative amounts of cyclic and non-cyclic electron flow to meet the demands of the plant for ATP and reducing power. Is involved in nitrate assimilation.
Pisum sativum (taxid: 3888)
EC: 1EC: .EC: 1EC: 8EC: .EC: 1EC: .EC: 2
>sp|P41345|FENR2_ORYSJ Ferredoxin--NADP reductase, root isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0784700 PE=1 SV=1 Back     alignment and function description
>sp|O04397|FENR2_TOBAC Ferredoxin--NADP reductase, root-type isozyme, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|O23877|FENR3_ORYSJ Ferredoxin--NADP reductase, embryo isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0147900 PE=1 SV=1 Back     alignment and function description
>sp|Q9M0V6|FNRR1_ARATH Ferredoxin--NADP reductase, root isozyme 1, chloroplastic OS=Arabidopsis thaliana GN=RFNR1 PE=2 SV=2 Back     alignment and function description
>sp|Q9S9P8|FNRR2_ARATH Ferredoxin--NADP reductase, root isozyme 2, chloroplastic OS=Arabidopsis thaliana GN=RFNR2 PE=1 SV=1 Back     alignment and function description
>sp|P53991|FENR_CHLRE Ferredoxin--NADP reductase, chloroplastic OS=Chlamydomonas reinhardtii GN=PETH PE=1 SV=1 Back     alignment and function description
>sp|Q00598|FENR_CYAPA Ferredoxin--NADP reductase, cyanelle OS=Cyanophora paradoxa GN=PETH PE=1 SV=1 Back     alignment and function description
>sp|P31973|FENR_SYNP2 Ferredoxin--NADP reductase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=petH PE=1 SV=1 Back     alignment and function description
>sp|Q8W493|FNRL2_ARATH Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic OS=Arabidopsis thaliana GN=LFNR2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query378
255564389378 ferredoxin--NADP reductase, putative [Ri 0.997 0.997 0.868 0.0
358248040377 uncharacterized protein LOC100807968 [Gl 0.997 1.0 0.854 0.0
449433597378 PREDICTED: ferredoxin--NADP reductase, r 0.997 0.997 0.839 0.0
359483949377 PREDICTED: ferredoxin--NADP reductase, r 0.997 1.0 0.830 0.0
358248309377 uncharacterized protein LOC100789291 [Gl 0.997 1.0 0.835 0.0
224056509378 predicted protein [Populus trichocarpa] 0.997 0.997 0.854 0.0
1480347378 ferrodoxin NADP oxidoreductase [Pisum sa 0.997 0.997 0.820 0.0
3913648377 RecName: Full=Ferredoxin--NADP reductase 0.997 1.0 0.820 0.0
263202219378 heterotrophic ferredoxin NADP+ oxidoredu 0.997 0.997 0.846 0.0
357448501378 Ferredoxin-NADP reductase [Medicago trun 0.997 0.997 0.815 0.0
>gi|255564389|ref|XP_002523191.1| ferredoxin--NADP reductase, putative [Ricinus communis] gi|223537598|gb|EEF39222.1| ferredoxin--NADP reductase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  693 bits (1789), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/379 (86%), Positives = 356/379 (93%), Gaps = 2/379 (0%)

Query: 1   MAHSA-VSQVAVAVPVGTDSTLRSAPLFKTQNLRLGEKSWAPVLSLDLKSRNPRLRNRYV 59
           MAHSA VSQV++AVPVG+DSTL+ + +FKT ++    KSWAP L+LDLKSR  +L+N+YV
Sbjct: 1   MAHSAAVSQVSLAVPVGSDSTLKRS-VFKTHSISFSGKSWAPSLALDLKSRKVQLKNQYV 59

Query: 60  VCMSVQQASKSKVAVSPLELEERSQPPLNLYKPKEPYTATIVSVERVVGAKAPGETCHIV 119
           VCMSVQQAS+SKVAVSPLELE+  +PPLNLYKPKEPYTATI SVER+VG KAPGETCHIV
Sbjct: 60  VCMSVQQASRSKVAVSPLELEDAKEPPLNLYKPKEPYTATIASVERLVGPKAPGETCHIV 119

Query: 120 IDHGGNVPYWEGQSYGVIPPGENPKKPGNPHNVRLYSIASTRYGDSFDGKTASLCVRRAV 179
           IDHGGNVPYWEGQSYGVIPPGENPKKPG PHNVRLYSIASTRYGD+FDGKTA+LCVRRA+
Sbjct: 120 IDHGGNVPYWEGQSYGVIPPGENPKKPGAPHNVRLYSIASTRYGDNFDGKTATLCVRRAL 179

Query: 180 YYDPESGKEDPSKSGICSNFLCNSKPGDKVLITGPSGKIMLLPEDNPNATHIMIATGTGI 239
           YYDPE+GKEDPSK GICSNFLCNSKPGDKV ITGPSGKIMLLPE +PNATHIMIATGTG+
Sbjct: 180 YYDPETGKEDPSKMGICSNFLCNSKPGDKVQITGPSGKIMLLPESDPNATHIMIATGTGV 239

Query: 240 APFRGYLRRMFMESVPTYKFGGLAWLFLGVANPDSLLYDDEFTKYLQDYPDNFRYDKALS 299
           APFRGYLRRMFME VPT+KFGGLAWLFLGVAN DSLLYDDEFTKYL+DYPD+FRYDKALS
Sbjct: 240 APFRGYLRRMFMEDVPTFKFGGLAWLFLGVANTDSLLYDDEFTKYLEDYPDHFRYDKALS 299

Query: 300 REQKNKKGGKMYVQDKIEEYSDEIFKRLDGGAHIYFCGLKGMMPGIQETLKRVAEQRGES 359
           REQKNK GGKMYVQDKIEEYSDEIFK LDGGAHIYFCGLKGMMPGIQ+TLK+VAEQRGES
Sbjct: 300 REQKNKNGGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPGIQDTLKKVAEQRGES 359

Query: 360 WDQKLSQLKKNKQWHVEVY 378
           WDQKLSQLKKNKQWHVEVY
Sbjct: 360 WDQKLSQLKKNKQWHVEVY 378

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|358248040|ref|NP_001239798.1| uncharacterized protein LOC100807968 [Glycine max] gi|255644524|gb|ACU22765.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|449433597|ref|XP_004134584.1| PREDICTED: ferredoxin--NADP reductase, root isozyme, chloroplastic-like [Cucumis sativus] gi|449531303|ref|XP_004172626.1| PREDICTED: LOW QUALITY PROTEIN: ferredoxin--NADP reductase, root isozyme, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359483949|ref|XP_002263658.2| PREDICTED: ferredoxin--NADP reductase, root isozyme, chloroplastic-like [Vitis vinifera] gi|297740833|emb|CBI31015.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|358248309|ref|NP_001239859.1| uncharacterized protein LOC100789291 [Glycine max] gi|255635878|gb|ACU18286.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|224056509|ref|XP_002298889.1| predicted protein [Populus trichocarpa] gi|222846147|gb|EEE83694.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|1480347|emb|CAA67796.1| ferrodoxin NADP oxidoreductase [Pisum sativum] Back     alignment and taxonomy information
>gi|3913648|sp|Q41014.2|FENR2_PEA RecName: Full=Ferredoxin--NADP reductase, root isozyme, chloroplastic; Short=FNR; Flags: Precursor Back     alignment and taxonomy information
>gi|263202219|gb|ACY70395.1| heterotrophic ferredoxin NADP+ oxidoreductase [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
>gi|357448501|ref|XP_003594526.1| Ferredoxin-NADP reductase [Medicago truncatula] gi|355483574|gb|AES64777.1| Ferredoxin-NADP reductase [Medicago truncatula] gi|388519649|gb|AFK47886.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query378
TAIR|locus:2115964378 RFNR1 "root FNR 1" [Arabidopsi 0.949 0.949 0.765 6.5e-154
TAIR|locus:2028145382 RFNR2 "root FNR 2" [Arabidopsi 0.947 0.937 0.765 1.2e-150
TAIR|locus:2156917360 FNR1 "AT5G66190" [Arabidopsis 0.830 0.872 0.484 3.2e-72
UNIPROTKB|P00455369 PETH "Ferredoxin--NADP reducta 0.785 0.804 0.477 1.3e-70
TAIR|locus:2198651369 FNR2 "AT1G20020" [Arabidopsis 0.753 0.772 0.498 3.3e-70
UNIPROTKB|P10933360 PETH "Ferredoxin--NADP reducta 0.753 0.791 0.491 2.4e-69
UNIPROTKB|P21890440 petH "Ferredoxin--NADP reducta 0.759 0.652 0.461 1.1e-64
UNIPROTKB|Q5LM61372 boxA "Benzoyl-CoA oxygenase, A 0.473 0.481 0.376 2.2e-25
TIGR_CMR|SPO_3703372 SPO_3703 "benzoyl-CoA oxygenas 0.473 0.481 0.376 2.2e-25
GENEDB_PFALCIPARUM|PFF1115w371 PFF1115w "ferredoxin--NADP red 0.550 0.560 0.294 6e-24
TAIR|locus:2115964 RFNR1 "root FNR 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1501 (533.4 bits), Expect = 6.5e-154, P = 6.5e-154
 Identities = 277/362 (76%), Positives = 316/362 (87%)

Query:    18 DSTLRSAPLFKTQNLRLGEKSWAP-VLSLDLKSRNPRLRNRYVVCMSVQQASKSKVAVSP 76
             D + RS  + K Q++   +KSW P +L LD KSR+  ++ R  +CMS+QQ+SKSKV V+P
Sbjct:    19 DGSSRS--MIKVQSISFTDKSWGPPLLRLDSKSRSLGVKKRSTICMSLQQSSKSKVLVTP 76

Query:    77 LELEERSQPPLNLYKPKEPYTATIVSVERVVGAKAPGETCHIVIDHGGNVPYWEGQSYGV 136
             LELE+  + PLNL++PKEPYTATIVSVER+VG +APGETCHIVIDH GNVPYWEGQSYGV
Sbjct:    77 LELEDPKETPLNLFRPKEPYTATIVSVERIVGPQAPGETCHIVIDHDGNVPYWEGQSYGV 136

Query:   137 IXXXXXXXXXXXXHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPESGKEDPSKSGIC 196
             I            HNVRLYSIASTRYGDSFDGKTASLCVRRA+YYDPE+GKEDPSK+G+C
Sbjct:   137 IPPGENPKKPGAPHNVRLYSIASTRYGDSFDGKTASLCVRRAIYYDPETGKEDPSKAGVC 196

Query:   197 SNFLCNSKPGDKVLITGPSGKIMLLPEDNPNATHIMIATGTGIAPFRGYLRRMFMESVPT 256
             SNFLCN+KPGDKV ITGPSGK+MLLPED+P ATHIMIATGTG+AP+RGYLRRMFME+VP 
Sbjct:   197 SNFLCNAKPGDKVKITGPSGKVMLLPEDDPKATHIMIATGTGVAPYRGYLRRMFMENVPN 256

Query:   257 YKFGGLAWLFLGVANPDSLLYDDEFTKYLQDYPDNFRYDKALSREQKNKKGGKMYVQDKI 316
             +KF GLAWLFLGVAN DSLLYD+EF  Y +DYP+NFRYDKALSRE+KNKKGGKMYVQDKI
Sbjct:   257 FKFDGLAWLFLGVANSDSLLYDEEFAGYRKDYPENFRYDKALSREEKNKKGGKMYVQDKI 316

Query:   317 EEYSDEIFKRLDGGAHIYFCGLKGMMPGIQETLKRVAEQRGESWDQKLSQLKKNKQWHVE 376
             EEYSDEIFK LD GAHIYFCGLKGMMPGIQ+TLKRVAE+RGESW+QKL+QL+KNKQWHVE
Sbjct:   317 EEYSDEIFKLLDNGAHIYFCGLKGMMPGIQDTLKRVAEERGESWEQKLTQLRKNKQWHVE 376

Query:   377 VY 378
             VY
Sbjct:   377 VY 378
GO:0004324 "ferredoxin-NADP+ reductase activity" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA;ISS
GO:0042651 "thylakoid membrane" evidence=IEA
GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA
GO:0050661 "NADP binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005507 "copper ion binding" evidence=IDA
TAIR|locus:2028145 RFNR2 "root FNR 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156917 FNR1 "AT5G66190" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P00455 PETH "Ferredoxin--NADP reductase, chloroplastic" [Spinacia oleracea (taxid:3562)] Back     alignment and assigned GO terms
TAIR|locus:2198651 FNR2 "AT1G20020" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P10933 PETH "Ferredoxin--NADP reductase, leaf isozyme, chloroplastic" [Pisum sativum (taxid:3888)] Back     alignment and assigned GO terms
UNIPROTKB|P21890 petH "Ferredoxin--NADP reductase" [Nostoc sp. PCC 7119 (taxid:1168)] Back     alignment and assigned GO terms
UNIPROTKB|Q5LM61 boxA "Benzoyl-CoA oxygenase, A subunit" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_3703 SPO_3703 "benzoyl-CoA oxygenase, A subunit" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PFF1115w PFF1115w "ferredoxin--NADP reductase, putative" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M0V6FNRR1_ARATH1, ., 1, 8, ., 1, ., 20.77890.99470.9947yesno
O23877FENR3_ORYSJ1, ., 1, 8, ., 1, ., 20.79940.99730.9973nono
O04397FENR2_TOBAC1, ., 1, 8, ., 1, ., 20.81790.98940.9973N/Ano
Q9S9P8FNRR2_ARATH1, ., 1, 8, ., 1, ., 20.77481.00.9895nono
P41345FENR2_ORYSJ1, ., 1, 8, ., 1, ., 20.80470.99730.9973yesno
P53991FENR_CHLRE1, ., 1, 8, ., 1, ., 20.57010.86500.9237N/Ano
Q41014FENR2_PEA1, ., 1, 8, ., 1, ., 20.82010.99731.0N/Ano
P31973FENR_SYNP21, ., 1, 8, ., 1, ., 20.50670.75920.7139yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.18.1.20.994
3rd Layer1.18.10.998

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_I4890
hypothetical protein (378 aa)
(Populus trichocarpa)
Predicted Functional Partners:
ndhB1
RecName- Full=NAD(P)H-quinone oxidoreductase chain 2, chloroplastic; EC=1.6.5.-; AltName- Full= [...] (259 aa)
      • 0.510
ndhJ
NADH dehydrogenase subunit ; NDH shuttles electrons from NAD(P)H-plastoquinone, via FMN and iro [...] (159 aa)
      • 0.510
XDH1
xanthine dehydrogenase (EC-1.17.1.4) (1368 aa)
      • 0.502
XDH2
Xanthine dehydrogenase (357 aa)
      • 0.502
eugene3.00110233
hypothetical protein (155 aa)
  •     0.424

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query378
PLN03116307 PLN03116, PLN03116, ferredoxin--NADP+ reductase; P 0.0
cd06208286 cd06208, CYPOR_like_FNR, These ferredoxin reductas 1e-177
PLN03115367 PLN03115, PLN03115, ferredoxin--NADP(+) reductase; 1e-111
cd06182267 cd06182, CYPOR_like, NADPH cytochrome p450 reducta 5e-69
TIGR03224411 TIGR03224, benzo_boxA, benzoyl-CoA oxygenase/reduc 1e-59
COG0369587 COG0369, CysJ, Sulfite reductase, alpha subunit (f 1e-54
cd06199360 cd06199, SiR, Cytochrome p450- like alpha subunits 4e-35
cd00322223 cd00322, FNR_like, Ferredoxin reductase (FNR), an 2e-33
pfam00175106 pfam00175, NAD_binding_1, Oxidoreductase NAD-bindi 2e-29
cd06203398 cd06203, methionine_synthase_red, Human methionine 5e-29
TIGR01931597 TIGR01931, cysJ, sulfite reductase [NADPH] flavopr 6e-28
cd06207382 cd06207, CyPoR_like, NADPH cytochrome p450 reducta 2e-27
cd06204416 cd06204, CYPOR, NADPH cytochrome p450 reductase (C 9e-27
cd06206384 cd06206, bifunctional_CYPOR, These bifunctional pr 9e-26
cd06201289 cd06201, SiR_like2, Cytochrome p450- like alpha su 3e-25
PRK06214530 PRK06214, PRK06214, sulfite reductase; Provisional 4e-25
cd06195241 cd06195, FNR1, Ferredoxin-NADP+ (oxido)reductase i 6e-23
PRK10953600 PRK10953, cysJ, sulfite reductase subunit alpha; P 9e-23
cd06202406 cd06202, Nitric_oxide_synthase, The ferredoxin-red 2e-21
cd06211238 cd06211, phenol_2-monooxygenase_like, Phenol 2-mon 5e-18
cd06183234 cd06183, cyt_b5_reduct_like, Cytochrome b5 reducta 7e-18
cd06188283 cd06188, NADH_quinone_reductase, Na+-translocating 2e-17
cd06200245 cd06200, SiR_like1, Cytochrome p450- like alpha su 3e-15
cd06209228 cd06209, BenDO_FAD_NAD, Benzoate dioxygenase reduc 1e-14
COG1018266 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NA 2e-13
cd06198216 cd06198, FNR_like_3, NAD(P) binding domain of ferr 2e-10
cd06187224 cd06187, O2ase_reductase_like, The oxygenase reduc 3e-10
cd06190232 cd06190, T4MO_e_transfer_like, Toluene-4-monoxygen 2e-09
cd06216243 cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur bi 1e-08
cd06218246 cd06218, DHOD_e_trans, FAD/NAD binding domain in t 1e-08
cd06213227 cd06213, oxygenase_e_transfer_subunit, The oxygena 2e-08
COG0543252 COG0543, UbiB, 2-polyprenylphenol hydroxylase and 2e-08
COG4097438 COG4097, COG4097, Predicted ferric reductase [Inor 5e-08
cd06210236 cd06210, MMO_FAD_NAD_binding, Methane monooxygenas 5e-08
TIGR01941405 TIGR01941, nqrF, NADH:ubiquinone oxidoreductase, N 1e-07
cd06217235 cd06217, FNR_iron_sulfur_binding_3, Iron-sulfur bi 1e-07
cd06185211 cd06185, PDR_like, Phthalate dioxygenase reductase 2e-07
PRK05464409 PRK05464, PRK05464, Na(+)-translocating NADH-quino 6e-07
cd06189224 cd06189, flavin_oxioreductase, NAD(P)H dependent f 1e-06
cd06214241 cd06214, PA_degradation_oxidoreductase_like, NAD(P 1e-06
cd06184247 cd06184, flavohem_like_fad_nad_binding, FAD_NAD(P) 4e-06
cd06196218 cd06196, FNR_like_1, Ferredoxin reductase-like pro 6e-06
COG2871410 COG2871, NqrF, Na+-transporting NADH:ubiquinone ox 7e-06
cd06212232 cd06212, monooxygenase_like, The oxygenase reducta 3e-05
PRK08221263 PRK08221, PRK08221, anaerobic sulfite reductase su 4e-05
cd06221253 cd06221, sulfite_reductase_like, Anaerobic sulfite 5e-05
cd06194222 cd06194, FNR_N-term_Iron_sulfur_binding, Iron-sulf 1e-04
PRK08345289 PRK08345, PRK08345, cytochrome-c3 hydrogenase subu 1e-04
cd06215231 cd06215, FNR_iron_sulfur_binding_1, Iron-sulfur bi 3e-04
cd06192243 cd06192, DHOD_e_trans_like, FAD/NAD binding domain 7e-04
PRK11872340 PRK11872, antC, anthranilate dioxygenase reductase 0.001
TIGR02911261 TIGR02911, sulfite_red_B, sulfite reductase, subun 0.002
>gnl|CDD|215586 PLN03116, PLN03116, ferredoxin--NADP+ reductase; Provisional Back     alignment and domain information 
 Score =  671 bits (1732), Expect = 0.0
 Identities = 269/307 (87%), Positives = 289/307 (94%)

Query: 72  VAVSPLELEERSQPPLNLYKPKEPYTATIVSVERVVGAKAPGETCHIVIDHGGNVPYWEG 131
           VAV PLELE+  +PPLNLYKPK PYTATIVSVER+VG KAPGETCHIVIDHGGNVPYWEG
Sbjct: 1   VAVKPLELEDAKEPPLNLYKPKAPYTATIVSVERIVGPKAPGETCHIVIDHGGNVPYWEG 60

Query: 132 QSYGVIPPGENPKKPGNPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPESGKEDPS 191
           QSYGVIPPG NPKKPG PHNVRLYSIASTRYGD FDGKTASLCVRRAVYYDPE+GKEDP+
Sbjct: 61  QSYGVIPPGTNPKKPGAPHNVRLYSIASTRYGDDFDGKTASLCVRRAVYYDPETGKEDPA 120

Query: 192 KSGICSNFLCNSKPGDKVLITGPSGKIMLLPEDNPNATHIMIATGTGIAPFRGYLRRMFM 251
           K G+CSNFLC++KPGDKV ITGPSGK+MLLPE++PNATHIM+ATGTGIAPFRG+LRRMFM
Sbjct: 121 KKGVCSNFLCDAKPGDKVQITGPSGKVMLLPEEDPNATHIMVATGTGIAPFRGFLRRMFM 180

Query: 252 ESVPTYKFGGLAWLFLGVANPDSLLYDDEFTKYLQDYPDNFRYDKALSREQKNKKGGKMY 311
           E VP +KFGGLAWLFLGVAN DSLLYDDEF +YL+DYPDNFRYD ALSREQKNKKGGKMY
Sbjct: 181 EDVPAFKFGGLAWLFLGVANSDSLLYDDEFERYLKDYPDNFRYDYALSREQKNKKGGKMY 240

Query: 312 VQDKIEEYSDEIFKRLDGGAHIYFCGLKGMMPGIQETLKRVAEQRGESWDQKLSQLKKNK 371
           VQDKIEEYSDEIFK LD GAHIYFCGLKGMMPGIQ+TLKRVAE+RGESW++KLS LKKNK
Sbjct: 241 VQDKIEEYSDEIFKLLDNGAHIYFCGLKGMMPGIQDTLKRVAEERGESWEEKLSGLKKNK 300

Query: 372 QWHVEVY 378
           QWHVEVY
Sbjct: 301 QWHVEVY 307

Length = 307
>gnl|CDD|99804 cd06208, CYPOR_like_FNR, These ferredoxin reductases are related to the NADPH cytochrome p450 reductases (CYPOR), but lack the FAD-binding region connecting sub-domain Back     alignment and domain information
>gnl|CDD|215585 PLN03115, PLN03115, ferredoxin--NADP(+) reductase; Provisional Back     alignment and domain information
>gnl|CDD|99779 cd06182, CYPOR_like, NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>gnl|CDD|132268 TIGR03224, benzo_boxA, benzoyl-CoA oxygenase/reductase, BoxA protein Back     alignment and domain information
>gnl|CDD|223446 COG0369, CysJ, Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|99796 cd06199, SiR, Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>gnl|CDD|99778 cd00322, FNR_like, Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I Back     alignment and domain information
>gnl|CDD|215769 pfam00175, NAD_binding_1, Oxidoreductase NAD-binding domain Back     alignment and domain information
>gnl|CDD|99800 cd06203, methionine_synthase_red, Human methionine synthase reductase (MSR) restores methionine sythase which is responsible for the regeneration of methionine from homocysteine, as well as the coversion of methyltetrahydrofolate to tetrahydrofolate Back     alignment and domain information
>gnl|CDD|233643 TIGR01931, cysJ, sulfite reductase [NADPH] flavoprotein, alpha-component Back     alignment and domain information
>gnl|CDD|99803 cd06207, CyPoR_like, NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>gnl|CDD|99801 cd06204, CYPOR, NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>gnl|CDD|99802 cd06206, bifunctional_CYPOR, These bifunctional proteins fuse N-terminal cytochrome p450 with a cytochrome p450 reductase (CYPOR) Back     alignment and domain information
>gnl|CDD|99798 cd06201, SiR_like2, Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>gnl|CDD|235745 PRK06214, PRK06214, sulfite reductase; Provisional Back     alignment and domain information
>gnl|CDD|99792 cd06195, FNR1, Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin Back     alignment and domain information
>gnl|CDD|182862 PRK10953, cysJ, sulfite reductase subunit alpha; Provisional Back     alignment and domain information
>gnl|CDD|99799 cd06202, Nitric_oxide_synthase, The ferredoxin-reductase (FNR) like C-terminal domain of the nitric oxide synthase (NOS) fuses with a heme-containing N-terminal oxidase domain Back     alignment and domain information
>gnl|CDD|99807 cd06211, phenol_2-monooxygenase_like, Phenol 2-monooxygenase (phenol hydroxylase) is a flavoprotein monooxygenase, able to use molecular oxygen as a substrate in the microbial degredation of phenol Back     alignment and domain information
>gnl|CDD|99780 cd06183, cyt_b5_reduct_like, Cytochrome b5 reductase catalyzes the reduction of 2 molecules of cytochrome b5 using NADH as an electron donor Back     alignment and domain information
>gnl|CDD|99785 cd06188, NADH_quinone_reductase, Na+-translocating NADH:quinone oxidoreductase (Na+-NQR) FAD/NADH binding domain Back     alignment and domain information
>gnl|CDD|99797 cd06200, SiR_like1, Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>gnl|CDD|99805 cd06209, BenDO_FAD_NAD, Benzoate dioxygenase reductase (BenDO) FAD/NAD binding domain Back     alignment and domain information
>gnl|CDD|223949 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|99795 cd06198, FNR_like_3, NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) domain, which varies in orientation with respect to the NAD(P) binding domain Back     alignment and domain information
>gnl|CDD|99784 cd06187, O2ase_reductase_like, The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons using oxygen as the oxidant Back     alignment and domain information
>gnl|CDD|99787 cd06190, T4MO_e_transfer_like, Toluene-4-monoxygenase electron transfer component of Pseudomonas mendocina hydroxylates toluene and forms p-cresol as part of a three component toluene-4-monoxygenase system Back     alignment and domain information
>gnl|CDD|99812 cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>gnl|CDD|99814 cd06218, DHOD_e_trans, FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase Back     alignment and domain information
>gnl|CDD|99809 cd06213, oxygenase_e_transfer_subunit, The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons Back     alignment and domain information
>gnl|CDD|223617 COG0543, UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>gnl|CDD|226582 COG4097, COG4097, Predicted ferric reductase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|99806 cd06210, MMO_FAD_NAD_binding, Methane monooxygenase (MMO) reductase of methanotrophs catalyzes the NADH-dependent hydroxylation of methane to methanol Back     alignment and domain information
>gnl|CDD|130996 TIGR01941, nqrF, NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit Back     alignment and domain information
>gnl|CDD|99813 cd06217, FNR_iron_sulfur_binding_3, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>gnl|CDD|99782 cd06185, PDR_like, Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster Back     alignment and domain information
>gnl|CDD|235481 PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional Back     alignment and domain information
>gnl|CDD|99786 cd06189, flavin_oxioreductase, NAD(P)H dependent flavin oxidoreductases use flavin as a substrate in mediating electron transfer from iron complexes or iron proteins Back     alignment and domain information
>gnl|CDD|99810 cd06214, PA_degradation_oxidoreductase_like, NAD(P) binding domain of ferredoxin reductase like phenylacetic acid (PA) degradation oxidoreductase Back     alignment and domain information
>gnl|CDD|99781 cd06184, flavohem_like_fad_nad_binding, FAD_NAD(P)H binding domain of flavohemoglobin Back     alignment and domain information
>gnl|CDD|99793 cd06196, FNR_like_1, Ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which varies in orientation with respect to the NAD(P) binding domain Back     alignment and domain information
>gnl|CDD|225426 COG2871, NqrF, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|99808 cd06212, monooxygenase_like, The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons Back     alignment and domain information
>gnl|CDD|181300 PRK08221, PRK08221, anaerobic sulfite reductase subunit B; Provisional Back     alignment and domain information
>gnl|CDD|99817 cd06221, sulfite_reductase_like, Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases Back     alignment and domain information
>gnl|CDD|99791 cd06194, FNR_N-term_Iron_sulfur_binding, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an N-terminal Iron-Sulfur binding cluster domain Back     alignment and domain information
>gnl|CDD|236247 PRK08345, PRK08345, cytochrome-c3 hydrogenase subunit gamma; Provisional Back     alignment and domain information
>gnl|CDD|99811 cd06215, FNR_iron_sulfur_binding_1, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>gnl|CDD|99789 cd06192, DHOD_e_trans_like, FAD/NAD binding domain (electron transfer subunit) of dihydroorotate dehydrogenase-like proteins Back     alignment and domain information
>gnl|CDD|183350 PRK11872, antC, anthranilate dioxygenase reductase; Provisional Back     alignment and domain information
>gnl|CDD|131957 TIGR02911, sulfite_red_B, sulfite reductase, subunit B Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 378
PLN03115367 ferredoxin--NADP(+) reductase; Provisional 100.0
PLN03116307 ferredoxin--NADP+ reductase; Provisional 100.0
cd06208286 CYPOR_like_FNR These ferredoxin reductases are rel 100.0
TIGR03224411 benzo_boxA benzoyl-CoA oxygenase/reductase, BoxA p 100.0
PRK11872340 antC anthranilate dioxygenase reductase; Provision 100.0
PRK07609339 CDP-6-deoxy-delta-3,4-glucoseen reductase; Validat 100.0
cd06182267 CYPOR_like NADPH cytochrome p450 reductase (CYPOR) 100.0
PRK05713312 hypothetical protein; Provisional 100.0
PRK05464409 Na(+)-translocating NADH-quinone reductase subunit 100.0
TIGR01941405 nqrF NADH:ubiquinone oxidoreductase, Na(+)-translo 100.0
cd06200245 SiR_like1 Cytochrome p450- like alpha subunits of 100.0
cd06201289 SiR_like2 Cytochrome p450- like alpha subunits of 100.0
cd06211238 phenol_2-monooxygenase_like Phenol 2-monooxygenase 100.0
cd06210236 MMO_FAD_NAD_binding Methane monooxygenase (MMO) re 100.0
cd06189224 flavin_oxioreductase NAD(P)H dependent flavin oxid 100.0
PRK08051232 fre FMN reductase; Validated 100.0
cd06188283 NADH_quinone_reductase Na+-translocating NADH:quin 100.0
cd06209228 BenDO_FAD_NAD Benzoate dioxygenase reductase (BenD 100.0
cd06212232 monooxygenase_like The oxygenase reductase FAD/NAD 100.0
cd06213227 oxygenase_e_transfer_subunit The oxygenase reducta 100.0
cd06195241 FNR1 Ferredoxin-NADP+ (oxido)reductase is an FAD-c 100.0
cd06207382 CyPoR_like NADPH cytochrome p450 reductase (CYPOR) 100.0
cd06190232 T4MO_e_transfer_like Toluene-4-monoxygenase electr 100.0
PRK10926248 ferredoxin-NADP reductase; Provisional 100.0
PRK10684332 HCP oxidoreductase, NADH-dependent; Provisional 100.0
TIGR01931597 cysJ sulfite reductase [NADPH] flavoprotein, alpha 100.0
cd06187224 O2ase_reductase_like The oxygenase reductase FAD/N 100.0
COG2871410 NqrF Na+-transporting NADH:ubiquinone oxidoreducta 100.0
cd06206384 bifunctional_CYPOR These bifunctional proteins fus 100.0
cd06215231 FNR_iron_sulfur_binding_1 Iron-sulfur binding ferr 100.0
TIGR02160352 PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, 100.0
cd06199360 SiR Cytochrome p450- like alpha subunits of E. col 100.0
cd06191231 FNR_iron_sulfur_binding Iron-sulfur binding Ferred 100.0
PRK10953600 cysJ sulfite reductase subunit alpha; Provisional 100.0
PRK06214530 sulfite reductase; Provisional 100.0
cd06194222 FNR_N-term_Iron_sulfur_binding Iron-sulfur binding 100.0
PRK08345289 cytochrome-c3 hydrogenase subunit gamma; Provision 100.0
cd06217235 FNR_iron_sulfur_binding_3 Iron-sulfur binding ferr 100.0
cd06204416 CYPOR NADPH cytochrome p450 reductase (CYPOR) serv 100.0
cd06184247 flavohem_like_fad_nad_binding FAD_NAD(P)H binding 100.0
cd06214241 PA_degradation_oxidoreductase_like NAD(P) binding 100.0
cd00322223 FNR_like Ferredoxin reductase (FNR), an FAD and NA 100.0
COG0369587 CysJ Sulfite reductase, alpha subunit (flavoprotei 100.0
PRK13289399 bifunctional nitric oxide dioxygenase/dihydropteri 100.0
PTZ00274325 cytochrome b5 reductase; Provisional 100.0
cd06203398 methionine_synthase_red Human methionine synthase 100.0
cd06216243 FNR_iron_sulfur_binding_2 Iron-sulfur binding ferr 100.0
cd06221253 sulfite_reductase_like Anaerobic sulfite reductase 100.0
cd06196218 FNR_like_1 Ferredoxin reductase-like proteins cata 100.0
cd06183234 cyt_b5_reduct_like Cytochrome b5 reductase catalyz 100.0
COG1018266 Hmp Flavodoxin reductases (ferredoxin-NADPH reduct 100.0
PRK08221263 anaerobic sulfite reductase subunit B; Provisional 100.0
PTZ00319300 NADH-cytochrome B5 reductase; Provisional 100.0
cd06202406 Nitric_oxide_synthase The ferredoxin-reductase (FN 100.0
cd06198216 FNR_like_3 NAD(P) binding domain of ferredoxin red 100.0
cd06218246 DHOD_e_trans FAD/NAD binding domain in the electro 100.0
KOG0534286 consensus NADH-cytochrome b-5 reductase [Coenzyme 100.0
TIGR02911261 sulfite_red_B sulfite reductase, subunit B. Member 100.0
COG0543252 UbiB 2-polyprenylphenol hydroxylase and related fl 100.0
PRK00054250 dihydroorotate dehydrogenase electron transfer sub 100.0
cd06185211 PDR_like Phthalate dioxygenase reductase (PDR) is 100.0
PRK06222281 ferredoxin-NADP(+) reductase subunit alpha; Review 100.0
cd06219248 DHOD_e_trans_like1 FAD/NAD binding domain in the e 100.0
KOG1158645 consensus NADP/FAD dependent oxidoreductase [Energ 100.0
PLN02252888 nitrate reductase [NADPH] 100.0
cd06220233 DHOD_e_trans_like2 FAD/NAD binding domain in the e 100.0
cd06192243 DHOD_e_trans_like FAD/NAD binding domain (electron 100.0
COG4097438 Predicted ferric reductase [Inorganic ion transpor 99.98
PRK05802320 hypothetical protein; Provisional 99.98
cd06197220 FNR_like_2 FAD/NAD(P) binding domain of ferredoxin 99.97
PTZ003061167 NADH-dependent fumarate reductase; Provisional 99.97
KOG1159574 consensus NADP-dependent flavoprotein reductase [E 99.97
cd06193235 siderophore_interacting Siderophore interacting pr 99.96
PRK12779944 putative bifunctional glutamate synthase subunit b 99.96
PRK12778 752 putative bifunctional 2-polyprenylphenol hydroxyla 99.96
cd06186210 NOX_Duox_like_FAD_NADP NADPH oxidase (NOX) catalyz 99.95
PRK12775 1006 putative trifunctional 2-polyprenylphenol hydroxyl 99.94
PLN02292 702 ferric-chelate reductase 99.92
PLN02631 699 ferric-chelate reductase 99.9
PLN02844 722 oxidoreductase/ferric-chelate reductase 99.89
PF00175109 NAD_binding_1: Oxidoreductase NAD-binding domain ; 99.84
KOG3378385 consensus Globins and related hemoproteins [Energy 99.83
KOG0039646 consensus Ferric reductase, NADH/NADPH oxidase and 99.79
PF0097099 FAD_binding_6: Oxidoreductase FAD-binding domain; 99.75
PRK065671028 putative bifunctional glutamate synthase subunit b 99.64
PF08030156 NAD_binding_6: Ferric reductase NAD binding domain 99.4
PF08022105 FAD_binding_8: FAD-binding domain; InterPro: IPR01 99.18
COG2375265 ViuB Siderophore-interacting protein [Inorganic io 99.16
PF08021117 FAD_binding_9: Siderophore-interacting FAD-binding 98.59
PF00667219 FAD_binding_1: FAD binding domain; InterPro: IPR00 98.16
CHL0013499 petF ferredoxin; Validated 87.45
PF04954119 SIP: Siderophore-interacting protein; InterPro: IP 87.35
PLN03136148 Ferredoxin; Provisional 86.16
TIGR0200897 fdx_plant ferredoxin [2Fe-2S]. This model represen 84.67
cd06199360 SiR Cytochrome p450- like alpha subunits of E. col 83.51
>PLN03115 ferredoxin--NADP(+) reductase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.3e-58  Score=447.19  Aligned_cols=362  Identities=46%  Similarity=0.793  Sum_probs=286.5

Q ss_pred             CcccccceeeeeeccCCccccccCcccccccccccCCCccccccccccccCCcCCccEEEEeeeeeec----ccceeecc
Q 017070            1 MAHSAVSQVAVAVPVGTDSTLRSAPLFKTQNLRLGEKSWAPVLSLDLKSRNPRLRNRYVVCMSVQQAS----KSKVAVSP   76 (378)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~l~C~~~~~~~----~sd~~i~~   76 (378)
                      ||++++++|+++.+.+++++.+. ..+.+.+++|....      +.-+ ++.+..++...- ..+.+.    .....+..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   71 (367)
T PLN03115          1 MAAAVNAAVSLPSSKSSSLPART-SAISPERIRLKKGP------LYYR-NNVSSGKRVVSI-RAQVTTETTTEAPAKVVK   71 (367)
T ss_pred             Ccchhhhhhcccccccccccccc-eeccCccccccccc------eecc-cccccccccccc-cccccccccccCCccccc
Confidence            89999999999999998887777 66667777774422      1001 000011211111 111111    00011111


Q ss_pred             cccccCCCCCCCCCCCCCCeEEEEeEEEEecCCCCCCceEEEEeeCCCCccccCCcEEEEeCCCCCCCCCCCCCCceecc
Q 017070           77 LELEERSQPPLNLYKPKEPYTATIVSVERVVGAKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGNPHNVRLYS  156 (378)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~a~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~~~~~~g~~~~~R~yS  156 (378)
                      ........+++|.|.++.++.++|+++++++.++..+++++|+|+.++.++|+||||+.|.+++.  +.+|.++..|+||
T Consensus        72 ~~~~~~~~~~~n~~~~~~p~~~~v~~n~~i~~~~~~~~v~~l~l~~~~~~~f~~GQfv~I~~~g~--~~~g~p~~~R~YS  149 (367)
T PLN03115         72 VSKKNEEGVVVNKFRPKEPYTGRCLLNTKITGDDAPGETWHMVFSTEGEIPYREGQSIGVIPDGI--DKNGKPHKLRLYS  149 (367)
T ss_pred             ccchhccCCceEeeccCCCeEEEEEeecccccCCCCCceEEEEEcCCCCCCcCCCCEEEEEcCCc--CCCCCcCceeeee
Confidence            11233346899999999999999999999999888889999999988889999999999998763  2345666789999


Q ss_pred             cccCCCCCCCCCCEEEEEEEEeeeecCCCCCCCCCCCCchhhHhhcCCCCCEEEEEeeCCCCCCCCCCCCCCcEEEEecC
Q 017070          157 IASTRYGDSFDGKTASLCVRRAVYYDPESGKEDPSKSGICSNFLCNSKPGDKVLITGPSGKIMLLPEDNPNATHIMIATG  236 (378)
Q Consensus       157 ias~p~~~~~~~~~l~l~Ir~~~~~~~~~~~~~~~~~G~~S~~L~~l~~Gd~v~v~GP~G~~~~~~~~~~~~~vv~IAgG  236 (378)
                      |+|.|.++..+++.++|+||++.|.++ ++.   .+.|.+|+||+++++||+|.|.||+|.+++.+. +..+++||||||
T Consensus       150 IAS~p~~~~~~~~~l~L~Vk~~~y~~~-~g~---~~~G~~S~~L~~Lk~Gd~V~v~GP~G~~fllp~-~~~~~iImIAgG  224 (367)
T PLN03115        150 IASSALGDFGDSKTVSLCVKRLVYTND-QGE---IVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPK-DPNATIIMLATG  224 (367)
T ss_pred             cCCCCcccCCCCCEEEEEEEEEEeecC-CCc---cCCeehHhhHhhCCCcCEEEEEeecCCceeCCc-CCCCCEEEEeCC
Confidence            999986432234789999998766432 222   267999999999999999999999999988764 356799999999


Q ss_pred             CcchhhHHHHHHHHhccCCCcccCCeEEEEEeecCCCCcccHHHHHHHHhhCCCceEEEEEeeccccccCCCccchhHHH
Q 017070          237 TGIAPFRGYLRRMFMESVPTYKFGGLAWLFLGVANPDSLLYDDEFTKYLQDYPDNFRYDKALSREQKNKKGGKMYVQDKI  316 (378)
Q Consensus       237 tGiaP~~sil~~~~~~~~~~~~~~~~v~L~~g~r~~~~~~~~del~~l~~~~~~~~~~~~~~Sr~~~~~~~~~~~v~~~i  316 (378)
                      ||||||+||+++++.......++.++++||||+|+.++++|.+||++|+++++++|++++++||++.+|.|.++|+++++
T Consensus       225 TGIAP~rs~L~~~~~~~~~~~~~~~~v~Lf~G~R~~~dlly~dELe~l~~~~p~~f~v~~a~SR~~~~~~G~kgyVqd~i  304 (367)
T PLN03115        225 TGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQTNAKGEKMYIQTRM  304 (367)
T ss_pred             eeHHHHHHHHHHHHhhccccccCCCcEEEEEccCCHHHhhHHHHHHHHHHhCCCCEEEEEEEcCCCcccCCcceeehhHH
Confidence            99999999999876554332333468999999999999999999999999987799999999999999999999999999


Q ss_pred             HhhHHHHHhccC-CCeEEEEeCCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHcCCeEEeeC
Q 017070          317 EEYSDEIFKRLD-GGAHIYFCGLKGMMPGIQETLKRVAEQRGESWDQKLSQLKKNKQWHVEVY  378 (378)
Q Consensus       317 ~~~~~~l~~~~~-~~~~vyvCGp~~m~~~v~~~L~~~g~~~g~~~~~~~~~l~~~~r~~~e~~  378 (378)
                      .++.+++++.++ .+..||+|||++|+++|.++|.+++...|++|++++.+|+++||||+|||
T Consensus       305 ~e~~e~l~~~l~~~~~~vYiCGp~~M~~~V~~~l~~l~~~~g~~~~~~~~~lk~~~r~~~e~y  367 (367)
T PLN03115        305 AEYAEELWELLKKDNTYVYMCGLKGMEKGIDDIMVSLAAKDGIDWFEYKKQLKKAEQWNVEVY  367 (367)
T ss_pred             HHHHHHHHhhcccCCeEEEEeCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHCCCeEEecC
Confidence            988888877663 56899999999999999999999999999999999999999999999999

>PLN03116 ferredoxin--NADP+ reductase; Provisional Back     alignment and domain information
>cd06208 CYPOR_like_FNR These ferredoxin reductases are related to the NADPH cytochrome p450 reductases (CYPOR), but lack the FAD-binding region connecting sub-domain Back     alignment and domain information
>TIGR03224 benzo_boxA benzoyl-CoA oxygenase/reductase, BoxA protein Back     alignment and domain information
>PRK11872 antC anthranilate dioxygenase reductase; Provisional Back     alignment and domain information
>PRK07609 CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated Back     alignment and domain information
>cd06182 CYPOR_like NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>PRK05713 hypothetical protein; Provisional Back     alignment and domain information
>PRK05464 Na(+)-translocating NADH-quinone reductase subunit F; Provisional Back     alignment and domain information
>TIGR01941 nqrF NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit Back     alignment and domain information
>cd06200 SiR_like1 Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>cd06201 SiR_like2 Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>cd06211 phenol_2-monooxygenase_like Phenol 2-monooxygenase (phenol hydroxylase) is a flavoprotein monooxygenase, able to use molecular oxygen as a substrate in the microbial degredation of phenol Back     alignment and domain information
>cd06210 MMO_FAD_NAD_binding Methane monooxygenase (MMO) reductase of methanotrophs catalyzes the NADH-dependent hydroxylation of methane to methanol Back     alignment and domain information
>cd06189 flavin_oxioreductase NAD(P)H dependent flavin oxidoreductases use flavin as a substrate in mediating electron transfer from iron complexes or iron proteins Back     alignment and domain information
>PRK08051 fre FMN reductase; Validated Back     alignment and domain information
>cd06188 NADH_quinone_reductase Na+-translocating NADH:quinone oxidoreductase (Na+-NQR) FAD/NADH binding domain Back     alignment and domain information
>cd06209 BenDO_FAD_NAD Benzoate dioxygenase reductase (BenDO) FAD/NAD binding domain Back     alignment and domain information
>cd06212 monooxygenase_like The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons Back     alignment and domain information
>cd06213 oxygenase_e_transfer_subunit The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons Back     alignment and domain information
>cd06195 FNR1 Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin Back     alignment and domain information
>cd06207 CyPoR_like NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>cd06190 T4MO_e_transfer_like Toluene-4-monoxygenase electron transfer component of Pseudomonas mendocina hydroxylates toluene and forms p-cresol as part of a three component toluene-4-monoxygenase system Back     alignment and domain information
>PRK10926 ferredoxin-NADP reductase; Provisional Back     alignment and domain information
>PRK10684 HCP oxidoreductase, NADH-dependent; Provisional Back     alignment and domain information
>TIGR01931 cysJ sulfite reductase [NADPH] flavoprotein, alpha-component Back     alignment and domain information
>cd06187 O2ase_reductase_like The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons using oxygen as the oxidant Back     alignment and domain information
>COG2871 NqrF Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF [Energy production and conversion] Back     alignment and domain information
>cd06206 bifunctional_CYPOR These bifunctional proteins fuse N-terminal cytochrome p450 with a cytochrome p450 reductase (CYPOR) Back     alignment and domain information
>cd06215 FNR_iron_sulfur_binding_1 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>TIGR02160 PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, PaaK subunit Back     alignment and domain information
>cd06199 SiR Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>cd06191 FNR_iron_sulfur_binding Iron-sulfur binding Ferredoxin Reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with a C-terminal iron-sulfur binding cluster domain Back     alignment and domain information
>PRK10953 cysJ sulfite reductase subunit alpha; Provisional Back     alignment and domain information
>PRK06214 sulfite reductase; Provisional Back     alignment and domain information
>cd06194 FNR_N-term_Iron_sulfur_binding Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an N-terminal Iron-Sulfur binding cluster domain Back     alignment and domain information
>PRK08345 cytochrome-c3 hydrogenase subunit gamma; Provisional Back     alignment and domain information
>cd06217 FNR_iron_sulfur_binding_3 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>cd06204 CYPOR NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>cd06184 flavohem_like_fad_nad_binding FAD_NAD(P)H binding domain of flavohemoglobin Back     alignment and domain information
>cd06214 PA_degradation_oxidoreductase_like NAD(P) binding domain of ferredoxin reductase like phenylacetic acid (PA) degradation oxidoreductase Back     alignment and domain information
>cd00322 FNR_like Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I Back     alignment and domain information
>COG0369 CysJ Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK13289 bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2; Provisional Back     alignment and domain information
>PTZ00274 cytochrome b5 reductase; Provisional Back     alignment and domain information
>cd06203 methionine_synthase_red Human methionine synthase reductase (MSR) restores methionine sythase which is responsible for the regeneration of methionine from homocysteine, as well as the coversion of methyltetrahydrofolate to tetrahydrofolate Back     alignment and domain information
>cd06216 FNR_iron_sulfur_binding_2 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>cd06221 sulfite_reductase_like Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases Back     alignment and domain information
>cd06196 FNR_like_1 Ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which varies in orientation with respect to the NAD(P) binding domain Back     alignment and domain information
>cd06183 cyt_b5_reduct_like Cytochrome b5 reductase catalyzes the reduction of 2 molecules of cytochrome b5 using NADH as an electron donor Back     alignment and domain information
>COG1018 Hmp Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion] Back     alignment and domain information
>PRK08221 anaerobic sulfite reductase subunit B; Provisional Back     alignment and domain information
>PTZ00319 NADH-cytochrome B5 reductase; Provisional Back     alignment and domain information
>cd06202 Nitric_oxide_synthase The ferredoxin-reductase (FNR) like C-terminal domain of the nitric oxide synthase (NOS) fuses with a heme-containing N-terminal oxidase domain Back     alignment and domain information
>cd06198 FNR_like_3 NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) domain, which varies in orientation with respect to the NAD(P) binding domain Back     alignment and domain information
>cd06218 DHOD_e_trans FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase Back     alignment and domain information
>KOG0534 consensus NADH-cytochrome b-5 reductase [Coenzyme transport and metabolism; Energy production and conversion] Back     alignment and domain information
>TIGR02911 sulfite_red_B sulfite reductase, subunit B Back     alignment and domain information
>COG0543 UbiB 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>PRK00054 dihydroorotate dehydrogenase electron transfer subunit; Reviewed Back     alignment and domain information
>cd06185 PDR_like Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster Back     alignment and domain information
>PRK06222 ferredoxin-NADP(+) reductase subunit alpha; Reviewed Back     alignment and domain information
>cd06219 DHOD_e_trans_like1 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins Back     alignment and domain information
>KOG1158 consensus NADP/FAD dependent oxidoreductase [Energy production and conversion] Back     alignment and domain information
>PLN02252 nitrate reductase [NADPH] Back     alignment and domain information
>cd06220 DHOD_e_trans_like2 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins Back     alignment and domain information
>cd06192 DHOD_e_trans_like FAD/NAD binding domain (electron transfer subunit) of dihydroorotate dehydrogenase-like proteins Back     alignment and domain information
>COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05802 hypothetical protein; Provisional Back     alignment and domain information
>cd06197 FNR_like_2 FAD/NAD(P) binding domain of ferredoxin reductase-like proteins Back     alignment and domain information
>PTZ00306 NADH-dependent fumarate reductase; Provisional Back     alignment and domain information
>KOG1159 consensus NADP-dependent flavoprotein reductase [Energy production and conversion] Back     alignment and domain information
>cd06193 siderophore_interacting Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family Back     alignment and domain information
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional Back     alignment and domain information
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional Back     alignment and domain information
>cd06186 NOX_Duox_like_FAD_NADP NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide Back     alignment and domain information
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional Back     alignment and domain information
>PLN02292 ferric-chelate reductase Back     alignment and domain information
>PLN02631 ferric-chelate reductase Back     alignment and domain information
>PLN02844 oxidoreductase/ferric-chelate reductase Back     alignment and domain information
>PF00175 NAD_binding_1: Oxidoreductase NAD-binding domain ; InterPro: IPR001433 Bacterial ferredoxin-NADP+ reductase may be bound to the thylakoid membrane or anchored to the thylakoid-bound phycobilisomes Back     alignment and domain information
>KOG3378 consensus Globins and related hemoproteins [Energy production and conversion] Back     alignment and domain information
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF00970 FAD_binding_6: Oxidoreductase FAD-binding domain; InterPro: IPR008333 These sequences contain an oxidoreductase FAD-binding domain Back     alignment and domain information
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated Back     alignment and domain information
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins Back     alignment and domain information
>PF08022 FAD_binding_8: FAD-binding domain; InterPro: IPR013112 This FAD binding domain is associated with ferric reductase NAD binding proteins and the heavy chain of Cytochrome b-245 Back     alignment and domain information
>COG2375 ViuB Siderophore-interacting protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF08021 FAD_binding_9: Siderophore-interacting FAD-binding domain; InterPro: IPR013113 Proteins in this entry are siderophore-interacting FAD-binding proteins Back     alignment and domain information
>PF00667 FAD_binding_1: FAD binding domain; InterPro: IPR003097 This domain is found in sulphite reductase, NADPH cytochrome P450 reductase, nitric oxide synthase and methionine synthase reductase Back     alignment and domain information
>CHL00134 petF ferredoxin; Validated Back     alignment and domain information
>PF04954 SIP: Siderophore-interacting protein; InterPro: IPR007037 This entry includes the vibriobactin utilization protein viuB, which is involved in the removal of iron from iron-vibriobactin complexes, as well as several hypothetical proteins Back     alignment and domain information
>PLN03136 Ferredoxin; Provisional Back     alignment and domain information
>TIGR02008 fdx_plant ferredoxin [2Fe-2S] Back     alignment and domain information
>cd06199 SiR Cytochrome p450- like alpha subunits of E Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query378
1jb9_A316 Crystal Structure Of The Ferredoxin:nadp+ Reductase 1e-161
3lvb_A311 Crystal Structure Of The Ferredoxin:nadp+ Reductase 1e-158
3lo8_A311 Crystal Structure Of The Oxidized Form Of Ferredoxi 1e-157
3vo2_A310 Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+ 5e-78
3vo1_A314 Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+ 2e-76
1gaq_A314 Crystal Structure Of The Complex Between Ferredoxin 3e-76
2b5o_A402 Ferredoxin-nadp Reductase Length = 402 1e-72
1sm4_A296 Crystal Structure Analysis Of The Ferredoxin-Nadp+ 1e-72
1fnb_A314 Refined Crystal Structure Of Spinach Ferredoxin Red 1e-72
1bx1_A314 Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reducta 6e-72
1frn_A314 The Involvement Of Ser96 In The Catalytic Mechanism 1e-71
1frq_A314 Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reducta 1e-71
1bx0_A314 Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reducta 2e-71
1qg0_A308 Wild-type Pea Fnr Length = 308 6e-71
3mhp_A296 Fnr-Recruitment To The Thylakoid Length = 296 9e-71
4af6_A308 Pea Fnr L268v Mutant Length = 308 1e-70
1qga_A308 Pea Fnr Y308w Mutant In Complex With Nadp+ Length = 2e-70
1qfy_A308 Pea Fnr Y308s Mutant In Complex With Nadp+ Length = 4e-70
4af7_A308 Pea Fnr C266m Mutant Length = 308 1e-69
2xnc_A315 Crystal Structure Of An Engineered Ferredoxin Nadp 4e-69
1ewy_A303 Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reduct 2e-67
1e63_A304 Ferredoxin:nadp+ Reductase Mutant With Lys 75 Repla 3e-67
1e64_A304 Ferredoxin:nadp+ Reductase Mutant With Lys 75 Repla 3e-67
1gr1_A303 Structure Of Ferredoxin-Nadp+ Reductase With Glu 13 4e-67
1go2_A304 Structure Of Ferredoxin-nadp+ Reductase With Lys 72 4e-67
1gjr_A304 Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By 4e-67
1que_A303 X-Ray Structure Of The Ferredoxin:nadp+ Reductase F 4e-67
1e62_A304 Ferredoxin:nadp+ Reductase Mutant With Lys 75 Repla 4e-67
2x3u_A303 Ferredoxin-Nadp Reductase Mutant With Tyr 303 Repla 4e-67
1quf_A304 X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+ 4e-67
1qgy_A295 Ferredoxin:nadp+ Reductase Mutant With Lys 75 Repla 5e-67
1h85_A295 Ferredoxin:nadp+ Reductase Mutant With Val 136 Repl 6e-67
1bjk_A295 Ferredoxin:nadp+ Reductase Mutant With Arg 264 Repl 8e-67
1w35_A304 Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W) Leng 1e-66
1b2r_A304 Ferredoxin-Nadp+ Reductase (Mutation: E 301 A) Leng 2e-66
1w34_A304 Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Lengt 2e-66
2bsa_A303 Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Compl 2e-66
1ogj_A303 Ferredoxin:nadp+ Reductase Mutant With Leu 263 Repl 3e-66
1bqe_A295 Ferredoxin:nadp+ Reductase Mutant With Thr 155 Repl 3e-66
1qgz_A295 Ferredoxin:nadp+ Reductase Mutant With Leu 78 Repla 5e-66
1ogi_A303 Ferredoxin:nadp+ Reductase Mutant With Thr 155 Repl 8e-66
1qh0_A295 Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutat 1e-65
1h42_A304 Ferredoxin:nadp+ Reductase Mutant With Thr 155 Repl 5e-65
2vyq_A304 Ferredoxin:nadp Reductase Mutant With Thr 155 Repla 1e-64
2bmw_A304 Ferredoxin: Nadp+reductase Mutant With Thr 155 Repl 1e-63
2rc5_A314 Refined Structure Of Fnr From Leptospira Interrogan 6e-36
3jqp_A316 Crystal Structure Of The H286l Mutant Of Ferredoxin 1e-24
2ok7_A316 Ferredoxin-Nadp+ Reductase From Plasmodium Falcipar 7e-24
3jqq_A316 Crystal Structure Of The H286k Mutant Of Ferredoxin 7e-24
1ddg_A374 Crystal Structure Of Sir-Fp60 Length = 374 3e-19
2bf4_A682 A Second Fmn-Binding Site In Yeast Nadph-Cytochrome 9e-18
2bpo_A682 Crystal Structure Of The Yeast Cpr Triple Mutant: D 9e-18
4dqk_A391 Crystal Structure Of The Fad Binding Domain Of Cyto 2e-13
4dql_A393 Crystal Structure Of The Fad Binding Domain Of Cyto 3e-13
2qtz_A539 Crystal Structure Of The Nadp+-Bound Fad-Containing 2e-10
2qtl_A539 Crystal Structure Of The Fad-Containing Fnr-Like Mo 3e-10
3qfs_A458 Crystal Structure Of Nadph-Cytochrome P450 Reductas 3e-10
3qe2_A618 Crystal Structure Of Human Nadph-Cytochrome P450 Re 7e-10
3qft_A458 Crystal Structure Of Nadph-Cytochrome P450 Reductas 9e-10
3fjo_A637 Structure Of Chimeric Yh Cpr Length = 637 1e-09
3qfr_A618 Crystal Structure Of Human Nadph-Cytochrome P450 Re 2e-09
3qfc_A618 Crystal Structure Of Human Nadph-Cytochrome P450 (V 4e-09
3es9_A618 Nadph-Cytochrome P450 Reductase In An Open Conforma 6e-09
1j9z_A622 Cypor-W677g Length = 622 6e-09
1amo_A615 Three-Dimensional Structure Of Nadph-Cytochrome P45 7e-09
1ja0_A620 Cypor-W677x Length = 620 7e-09
1f20_A435 Crystal Structure Of Rat Neuronal Nitric-Oxide Synt 1e-08
1tll_A688 Crystal Structure Of Rat Neuronal Nitric-Oxide Synt 3e-08
3ojx_A622 Disulfide Crosslinked Cytochrome P450 Reductase Ina 3e-08
2r6h_A290 Crystal Structure Of The Domain Comprising The Nad 4e-08
1ja1_A622 Cypor-Triple Mutant Length = 622 1e-07
>pdb|1JB9|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From Maize Root At 1.7 Angstroms Length = 316 Back     alignment and structure 
Iteration: 1

 Score =  563 bits (1450), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 263/316 (83%), Positives = 287/316 (90%)
Query: 63  SVQQASKSKVAVSPLELEERSQPPLNLYKPKEPYTATIVSVERVVGAKAPGETCHIVIDH 122
           SVQQAS+SKV+V+PL LE   +PPLN YKPKEP+TATIVSVE +VG KAPGETCHIVIDH
Sbjct: 1   SVQQASRSKVSVAPLHLESAKEPPLNTYKPKEPFTATIVSVESLVGPKAPGETCHIVIDH 60
Query: 123 GGNVPYWEGQSYGVIXXXXXXXXXXXXHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYD 182
           GGNVPYWEGQSYGVI             NVRLYSIASTRYGD+FDG+T SLCVRRAVYYD
Sbjct: 61  GGNVPYWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLCVRRAVYYD 120
Query: 183 PESGKEDPSKSGICSNFLCNSKPGDKVLITGPSGKIMLLPEDNPNATHIMIATGTGIAPF 242
           PE+GKEDPSK+G+CSNFLCNSKPGDK+ +TGPSGKIMLLPE++PNATHIMIATGTG+APF
Sbjct: 121 PETGKEDPSKNGVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPF 180
Query: 243 RGYLRRMFMESVPTYKFGGLAWLFLGVANPDSLLYDDEFTKYLQDYPDNFRYDKALSREQ 302
           RGYLRRMFME VP Y+FGGLAWLFLGVAN DSLLYD+EFT YL+ YPDNFRYDKALSREQ
Sbjct: 181 RGYLRRMFMEDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSYLKQYPDNFRYDKALSREQ 240
Query: 303 KNKKGGKMYVQDKIEEYSDEIFKRLDGGAHIYFCGLKGMMPGIQETLKRVAEQRGESWDQ 362
           KN+ GGKMYVQDKIEEYSDEIFK LDGGAHIYFCGLKGMMPGIQ+TLK+VAE+RGESWDQ
Sbjct: 241 KNRSGGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPGIQDTLKKVAERRGESWDQ 300
Query: 363 KLSQLKKNKQWHVEVY 378
           KL+QLKKNKQWHVEVY
Sbjct: 301 KLAQLKKNKQWHVEVY 316
>pdb|3LVB|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From Maize Root At 1.7 Angstroms - Test Set Withheld Length = 311 Back     alignment and structure
>pdb|3LO8|A Chain A, Crystal Structure Of The Oxidized Form Of Ferredoxin:nadp+ Reductase From Maize Root At 1.05 Angstroms Length = 311 Back     alignment and structure
>pdb|3VO2|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+ Reductase Iii Length = 310 Back     alignment and structure
>pdb|3VO1|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+ Reductase Ii Length = 314 Back     alignment and structure
>pdb|1GAQ|A Chain A, Crystal Structure Of The Complex Between Ferredoxin And Ferredoxin-Nadp+ Reductase Length = 314 Back     alignment and structure
>pdb|2B5O|A Chain A, Ferredoxin-nadp Reductase Length = 402 Back     alignment and structure
>pdb|1SM4|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+ Reductase From Paprika Length = 296 Back     alignment and structure
>pdb|1FNB|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'- Phospho-5'-Amp Bound States Length = 314 Back     alignment and structure
>pdb|1BX1|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase) Mutant E312q Length = 314 Back     alignment and structure
>pdb|1FRN|A Chain A, The Involvement Of Ser96 In The Catalytic Mechanism Of Ferredoxin-Nadp+ Reductase: Structure-Function Relationship As Studied By Site-Directed Mutagenesis And X- Ray Crystallography Length = 314 Back     alignment and structure
>pdb|1FRQ|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase) Mutant E312a Length = 314 Back     alignment and structure
>pdb|1BX0|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase) Mutant E312l Length = 314 Back     alignment and structure
>pdb|1QG0|A Chain A, Wild-type Pea Fnr Length = 308 Back     alignment and structure
>pdb|3MHP|A Chain A, Fnr-Recruitment To The Thylakoid Length = 296 Back     alignment and structure
>pdb|4AF6|A Chain A, Pea Fnr L268v Mutant Length = 308 Back     alignment and structure
>pdb|1QGA|A Chain A, Pea Fnr Y308w Mutant In Complex With Nadp+ Length = 308 Back     alignment and structure
>pdb|1QFY|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadp+ Length = 308 Back     alignment and structure
>pdb|4AF7|A Chain A, Pea Fnr C266m Mutant Length = 308 Back     alignment and structure
>pdb|2XNC|A Chain A, Crystal Structure Of An Engineered Ferredoxin Nadp Reductase (Fnr) From Pisum Sativum Length = 315 Back     alignment and structure
>pdb|1EWY|A Chain A, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase Complex Length = 303 Back     alignment and structure
>pdb|1E63|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By Ser (K75s) Length = 304 Back     alignment and structure
>pdb|1E64|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By Gln (K75q) Length = 304 Back     alignment and structure
>pdb|1GR1|A Chain A, Structure Of Ferredoxin-Nadp+ Reductase With Glu 139 Replaced By Lys (E139k) Length = 303 Back     alignment and structure
>pdb|1GO2|A Chain A, Structure Of Ferredoxin-nadp+ Reductase With Lys 72 Replaced By Glu (k72e) Length = 304 Back     alignment and structure
>pdb|1GJR|A Chain A, Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By Cocrystallization Length = 304 Back     alignment and structure
>pdb|1QUE|A Chain A, X-Ray Structure Of The Ferredoxin:nadp+ Reductase From The Cyanobacterium Anabaena Pcc 7119 At 1.8 Angstroms Length = 303 Back     alignment and structure
>pdb|1E62|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By Arg (K75r) Length = 304 Back     alignment and structure
>pdb|2X3U|A Chain A, Ferredoxin-Nadp Reductase Mutant With Tyr 303 Replaced By Phe (Y303f) Length = 303 Back     alignment and structure
>pdb|1QUF|A Chain A, X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+ Reductase From The Cyanobacterium Anabaena Pcc 7119 At 2.25 Angstroms Length = 304 Back     alignment and structure
>pdb|1QGY|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By Glu (K75e) Length = 295 Back     alignment and structure
>pdb|1H85|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Val 136 Replaced By Leu (V136l) Length = 295 Back     alignment and structure
>pdb|1BJK|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Arg 264 Replaced By Glu (r264e) Length = 295 Back     alignment and structure
>pdb|1W35|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W) Length = 304 Back     alignment and structure
>pdb|1B2R|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: E 301 A) Length = 304 Back     alignment and structure
>pdb|1W34|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Length = 304 Back     alignment and structure
>pdb|2BSA|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Complexed With Nadp Length = 303 Back     alignment and structure
>pdb|1OGJ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 263 Replaced By Pro (L263p) Length = 303 Back     alignment and structure
>pdb|1BQE|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By Gly (T155g) Length = 295 Back     alignment and structure
>pdb|1QGZ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 78 Replaced By Asp (L78d) Length = 295 Back     alignment and structure
>pdb|1OGI|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By Gly And Ala 160 Replaced By Thr (T155g-A160t) Length = 303 Back     alignment and structure
>pdb|1QH0|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutated By Asp And Leu 78 Mutated By Asp Length = 295 Back     alignment and structure
>pdb|1H42|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By Gly, Ala 160 Replaced By Thr And Leu 263 Replaced By Pro (T155g-A160t-L263p) Length = 304 Back     alignment and structure
>pdb|2VYQ|A Chain A, Ferredoxin:nadp Reductase Mutant With Thr 155 Replaced By Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro And Tyr 303 Replaced By Ser (T155g-A160t-L263p-Y303s) Length = 304 Back     alignment and structure
>pdb|2BMW|A Chain A, Ferredoxin: Nadp+reductase Mutant With Thr 155 Replaced By Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro, Arg 264 Replaced By Pro And Gly 265 Replaced By Pro (T155g- A160t-L263p-R264p-G265p) Length = 304 Back     alignment and structure
>pdb|2RC5|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans Length = 314 Back     alignment and structure
>pdb|3JQP|A Chain A, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With 2'p-Amp Length = 316 Back     alignment and structure
>pdb|2OK7|A Chain A, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With 2'p-Amp Length = 316 Back     alignment and structure
>pdb|3JQQ|A Chain A, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum In Complex With 2'p- Amp Length = 316 Back     alignment and structure
>pdb|1DDG|A Chain A, Crystal Structure Of Sir-Fp60 Length = 374 Back     alignment and structure
>pdb|2BF4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450 Reductase Suggests A Novel Mechanism Of Electron Transfer By Diflavin Reductases. Length = 682 Back     alignment and structure
>pdb|2BPO|A Chain A, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g, Y75f, K78a. Length = 682 Back     alignment and structure
>pdb|4DQK|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome P450 Bm3 Length = 391 Back     alignment and structure
>pdb|4DQL|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome P450 Bm3 In Complex With Nadp+ Length = 393 Back     alignment and structure
>pdb|2QTZ|A Chain A, Crystal Structure Of The Nadp+-Bound Fad-Containing Fnr-Like Module Of Human Methionine Synthase Reductase Length = 539 Back     alignment and structure
>pdb|2QTL|A Chain A, Crystal Structure Of The Fad-Containing Fnr-Like Module Of Human Methionine Synthase Reductase Length = 539 Back     alignment and structure
>pdb|3QFS|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase (FadNADPH Domain) Length = 458 Back     alignment and structure
>pdb|3QE2|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase Length = 618 Back     alignment and structure
>pdb|3QFT|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase (FadNADPH DOMAIN And R457h Mutant) Length = 458 Back     alignment and structure
>pdb|3FJO|A Chain A, Structure Of Chimeric Yh Cpr Length = 637 Back     alignment and structure
>pdb|3QFR|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase (R457h Mutant) Length = 618 Back     alignment and structure
>pdb|3QFC|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e Mutant) Length = 618 Back     alignment and structure
>pdb|3ES9|A Chain A, Nadph-Cytochrome P450 Reductase In An Open Conformation Length = 618 Back     alignment and structure
>pdb|1J9Z|A Chain A, Cypor-W677g Length = 622 Back     alignment and structure
>pdb|1AMO|A Chain A, Three-Dimensional Structure Of Nadph-Cytochrome P450 Reductase: Prototype For Fmn-And Fad-Containing Enzymes Length = 615 Back     alignment and structure
>pdb|1JA0|A Chain A, Cypor-W677x Length = 620 Back     alignment and structure
>pdb|1F20|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase FadNADP+ Domain At 1.9a Resolution Length = 435 Back     alignment and structure
>pdb|1TLL|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase Reductase Module At 2.3 A Resolution. Length = 688 Back     alignment and structure
>pdb|3OJX|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive Length = 622 Back     alignment and structure
>pdb|2R6H|A Chain A, Crystal Structure Of The Domain Comprising The Nad Binding And The Fad Binding Regions Of The Nadh:ubiquinone Oxidoreductase, Na Translocating, F Subunit From Porphyromonas Gingivalis Length = 290 Back     alignment and structure
>pdb|1JA1|A Chain A, Cypor-Triple Mutant Length = 622 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query378
3lo8_A311 Ferredoxin--NADP reductase; electron transport, ox 1e-150
1fnb_A314 Ferredoxin-NADP+ reductase; oxidoreductase (NADP+( 1e-134
2bmw_A304 Ferredoxin--NADP reductase; oxidoreductase, flavop 1e-130
2b5o_A402 FNR, ferredoxin--NADP reductase; complex with FAD, 1e-124
2rc5_A314 Ferredoxin-NADP reductase; FAD, oxidoreductase; HE 1e-121
3jqq_A316 Ferredoxin NADP reductase; FAD, oxidoreductase; HE 1e-111
4dql_A393 Bifunctional P-450/NADPH-P450 reductase; rossmann 4e-42
3qe2_A618 CPR, P450R, NADPH--cytochrome P450 reductase; cypo 5e-42
1tll_A688 Nitric-oxide synthase, brain; reductase module, FM 8e-42
2bpo_A682 CPR, P450R, NADPH-cytochrom P450 reductase; NADPH- 1e-41
1f20_A435 Nitric-oxide synthase; nitric-xoide synthase, redu 8e-41
1ddg_A374 Sulfite reductase (NADPH) flavoprotein alpha- comp 2e-40
3qfs_A458 CPR, P450R, NADPH--cytochrome P450 reductase; flav 4e-40
2qtl_A539 MSR;, methionine synthase reductase; alpha-beta-al 3e-38
1krh_A338 Benzoate 1,2-dioxygenase reductase; alpha-beta, FA 2e-23
1tvc_A250 Methane monooxygenase component C, methane monooxy 3e-23
2r6h_A290 NADH:ubiquinone oxidoreductase, Na translocating, 5e-22
1fdr_A248 Flavodoxin reductase; ferredoxin reductase, flavin 1e-21
1qfj_A232 Protein (flavin reductase); riboflavin, ferredoxin 3e-21
2qdx_A257 Ferredoxin reductase; oxidoreductase; HET: FAD; 1. 1e-18
2bgi_A272 Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxi 2e-18
4fk8_A271 Ferredoxin--NADP reductase; ssgcid, NIH, niaid, st 4e-16
2eix_A243 NADH-cytochrome B5 reductase; flavoprotein, FAD-bi 4e-14
2cnd_A270 NADH-dependent nitrate reductase; nitrate assimila 2e-13
1cqx_A403 Flavohemoprotein; globin fold, six-stranded antipa 2e-13
1umk_A275 B5R, NADH-cytochrome B5 reductase; flavoprotein, b 2e-13
1gvh_A396 Flavohemoprotein; oxidoreductase, NADP, heme, flav 3e-11
2pia_A321 Phthalate dioxygenase reductase; HET: FMN; 2.00A { 3e-10
4eh1_A243 Flavohemoprotein; structural genomics, niaid, nati 3e-09
1ep3_B262 Dihydroorotate dehydrogenase B (PYRK subunit); het 5e-08
3lrx_A158 Putative hydrogenase; alpha-beta protein, structur 1e-07
3lyu_A142 Putative hydrogenase; the C-terminal has AN alpha- 4e-04
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A* Length = 311 Back     alignment and structure
 Score =  424 bits (1092), Expect = e-150
 Identities = 269/311 (86%), Positives = 293/311 (94%)

Query: 68  SKSKVAVSPLELEERSQPPLNLYKPKEPYTATIVSVERVVGAKAPGETCHIVIDHGGNVP 127
           S+SKV+V+PL LE   +PPLN YKPKEP+TATIVSVE +VG KAPGETCHIVIDHGGNVP
Sbjct: 1   SRSKVSVAPLHLESAKEPPLNTYKPKEPFTATIVSVESLVGPKAPGETCHIVIDHGGNVP 60

Query: 128 YWEGQSYGVIPPGENPKKPGNPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPESGK 187
           YWEGQSYGVIPPGENPKKPG P NVRLYSIASTRYGD+FDG+T SLCVRRAVYYDPE+GK
Sbjct: 61  YWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLCVRRAVYYDPETGK 120

Query: 188 EDPSKSGICSNFLCNSKPGDKVLITGPSGKIMLLPEDNPNATHIMIATGTGIAPFRGYLR 247
           EDPSK+G+CSNFLCNSKPGDK+ +TGPSGKIMLLPE++PNATHIMIATGTG+APFRGYLR
Sbjct: 121 EDPSKNGVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLR 180

Query: 248 RMFMESVPTYKFGGLAWLFLGVANPDSLLYDDEFTKYLQDYPDNFRYDKALSREQKNKKG 307
           RMFME VP Y+FGGLAWLFLGVAN DSLLYD+EFT YL+ YPDNFRYDKALSREQKN+ G
Sbjct: 181 RMFMEDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSYLKQYPDNFRYDKALSREQKNRSG 240

Query: 308 GKMYVQDKIEEYSDEIFKRLDGGAHIYFCGLKGMMPGIQETLKRVAEQRGESWDQKLSQL 367
           GKMYVQDKIEEYSDEIFK LDGGAHIYFCGLKGMMPGIQ+TLK+VAE+RGESWDQKL+QL
Sbjct: 241 GKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPGIQDTLKKVAERRGESWDQKLAQL 300

Query: 368 KKNKQWHVEVY 378
           KKNKQWHVEVY
Sbjct: 301 KKNKQWHVEVY 311
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A* Length = 314 Back     alignment and structure
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ... Length = 304 Back     alignment and structure
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP} Length = 402 Back     alignment and structure
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A* Length = 314 Back     alignment and structure
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A* Length = 316 Back     alignment and structure
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A* Length = 393 Back     alignment and structure
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A* Length = 618 Back     alignment and structure
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4 Length = 688 Back     alignment and structure
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A* Length = 682 Back     alignment and structure
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4 Length = 435 Back     alignment and structure
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A* Length = 374 Back     alignment and structure
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A* Length = 458 Back     alignment and structure
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A* Length = 539 Back     alignment and structure
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2 Length = 338 Back     alignment and structure
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2 Length = 250 Back     alignment and structure
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis} Length = 290 Back     alignment and structure
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A* Length = 248 Back     alignment and structure
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 Length = 232 Back     alignment and structure
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A* Length = 257 Back     alignment and structure
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A* Length = 272 Back     alignment and structure
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A* Length = 271 Back     alignment and structure
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum} Length = 243 Back     alignment and structure
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A* Length = 270 Back     alignment and structure
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A* Length = 403 Back     alignment and structure
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A* Length = 275 Back     alignment and structure
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 Length = 396 Back     alignment and structure
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2 Length = 321 Back     alignment and structure
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor} Length = 243 Back     alignment and structure
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B* Length = 262 Back     alignment and structure
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus} Length = 158 Back     alignment and structure
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus} Length = 142 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query378
3vo2_A310 Putative uncharacterized protein; rossmann fold, o 100.0
3lo8_A311 Ferredoxin--NADP reductase; electron transport, ox 100.0
1fnb_A314 Ferredoxin-NADP+ reductase; oxidoreductase (NADP+( 100.0
2b5o_A402 FNR, ferredoxin--NADP reductase; complex with FAD, 100.0
2bmw_A304 Ferredoxin--NADP reductase; oxidoreductase, flavop 100.0
2rc5_A314 Ferredoxin-NADP reductase; FAD, oxidoreductase; HE 100.0
3jqq_A316 Ferredoxin NADP reductase; FAD, oxidoreductase; HE 100.0
1krh_A338 Benzoate 1,2-dioxygenase reductase; alpha-beta, FA 100.0
1ddg_A374 Sulfite reductase (NADPH) flavoprotein alpha- comp 100.0
1tvc_A250 Methane monooxygenase component C, methane monooxy 100.0
1qfj_A232 Protein (flavin reductase); riboflavin, ferredoxin 100.0
2eix_A243 NADH-cytochrome B5 reductase; flavoprotein, FAD-bi 100.0
1fdr_A248 Flavodoxin reductase; ferredoxin reductase, flavin 100.0
2r6h_A290 NADH:ubiquinone oxidoreductase, Na translocating, 100.0
2qtl_A539 MSR;, methionine synthase reductase; alpha-beta-al 100.0
4dql_A393 Bifunctional P-450/NADPH-P450 reductase; rossmann 100.0
3qfs_A458 CPR, P450R, NADPH--cytochrome P450 reductase; flav 100.0
1f20_A435 Nitric-oxide synthase; nitric-xoide synthase, redu 100.0
1umk_A275 B5R, NADH-cytochrome B5 reductase; flavoprotein, b 100.0
4fk8_A271 Ferredoxin--NADP reductase; ssgcid, NIH, niaid, st 100.0
2bgi_A272 Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxi 100.0
2bpo_A682 CPR, P450R, NADPH-cytochrom P450 reductase; NADPH- 100.0
4eh1_A243 Flavohemoprotein; structural genomics, niaid, nati 100.0
3qe2_A618 CPR, P450R, NADPH--cytochrome P450 reductase; cypo 100.0
2cnd_A270 NADH-dependent nitrate reductase; nitrate assimila 100.0
2qdx_A257 Ferredoxin reductase; oxidoreductase; HET: FAD; 1. 100.0
1gvh_A396 Flavohemoprotein; oxidoreductase, NADP, heme, flav 100.0
1tll_A688 Nitric-oxide synthase, brain; reductase module, FM 100.0
4g1v_A399 Flavohemoglobin; three domains: globin fold, antip 100.0
1cqx_A403 Flavohemoprotein; globin fold, six-stranded antipa 100.0
1ep3_B262 Dihydroorotate dehydrogenase B (PYRK subunit); het 100.0
2pia_A321 Phthalate dioxygenase reductase; HET: FMN; 2.00A { 100.0
2gpj_A252 Siderophore-interacting protein; structural genomi 99.96
3lrx_A158 Putative hydrogenase; alpha-beta protein, structur 99.89
3lyu_A142 Putative hydrogenase; the C-terminal has AN alpha- 99.87
3a1f_A186 Cytochrome B-245 heavy chain; GP91(PHOX), NADPH bi 99.83
1wri_A93 Ferredoxin II, ferredoxin; electron transport; 1.2 81.03
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A* Back     alignment and structure
Probab=100.00  E-value=3.8e-52  Score=398.40  Aligned_cols=293  Identities=53%  Similarity=0.929  Sum_probs=253.7

Q ss_pred             cccCCCCCCCCCCCCCCeEEEEeEEEEecCCCCCCceEEEEeeCCCCccccCCcEEEEeCCCCCCCCCCCCCCceecccc
Q 017070           79 LEERSQPPLNLYKPKEPYTATIVSVERVVGAKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGNPHNVRLYSIA  158 (378)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~a~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~~~~~~g~~~~~R~ySia  158 (378)
                      ..+..+++.|.+.|..++.++|++++++++++.++++++|+|+.+..+.|+||||+.|.+++.+  .+|.++..|+|||+
T Consensus        17 ~~~~~~~~~~~~~p~~~~~~~V~~~~~l~~~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~~--~~g~~~~~R~ySia   94 (310)
T 3vo2_A           17 KKQDEGLVTNKYKPKEPYVGRCLSNTRITGDDAPGETWHMVFSTEGEIPYREGQSIGIIADGED--KNGKPHKLRLYSIA   94 (310)
T ss_dssp             SBSCTTCCCCSBBTTBCEEEEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEEEECSSBC--TTSCBCCCEEEECC
T ss_pred             cccccCCceeeecCCCCEEEEEEEEEEccCCCCCccEEEEEEeCCCCCcccCCCEEEEECCCcC--CCCCcCcceeeecC
Confidence            4556678999999999999999999999998888889999999888889999999999998742  24555679999999


Q ss_pred             cCCCCCCCCCCEEEEEEEEeeeecCCCCCCCCCCCCchhhHhhcCCCCCEEEEEeeCCCCCCCCCCCCCCcEEEEecCCc
Q 017070          159 STRYGDSFDGKTASLCVRRAVYYDPESGKEDPSKSGICSNFLCNSKPGDKVLITGPSGKIMLLPEDNPNATHIMIATGTG  238 (378)
Q Consensus       159 s~p~~~~~~~~~l~l~Ir~~~~~~~~~~~~~~~~~G~~S~~L~~l~~Gd~v~v~GP~G~~~~~~~~~~~~~vv~IAgGtG  238 (378)
                      |+|..+..+.+.++|+||++.|.++ .+.   .++|.+|+||+++++|++|.|.||+|.+++.+. +..+++||||||||
T Consensus        95 s~p~~~~~~~~~~~l~Vk~~~~~~~-~~~---~~~G~~S~~L~~l~~Gd~v~v~gP~G~~~~~~~-~~~~~~vlIagGtG  169 (310)
T 3vo2_A           95 SSALGDFGDSKTVSLCVKRLVYTND-QGE---IVKGVCSNFLCDLKPGADVKITGPVGKEMLMPK-DPNATVIMLATGTG  169 (310)
T ss_dssp             SCTTTTTTSSSEEEEEEECCEEECT-TSC---EEECHHHHHHHTCCTTCEEEEEEEECSTTCCBS-CTTCEEEEEEEGGG
T ss_pred             CCCcccCCCCCEEEEEEEEEEeccC-CCC---cCCcchhhHHhcCCCCCEEEEEeccCCcccCCC-CCCCCEEEEeCCcc
Confidence            9996432235899999998755432 221   147999999999999999999999999887663 25689999999999


Q ss_pred             chhhHHHHHHHHhccCCCcccCCeEEEEEeecCCCCcccHHHHHHHHhhCCCceEEEEEeeccccccCCCccchhHHHHh
Q 017070          239 IAPFRGYLRRMFMESVPTYKFGGLAWLFLGVANPDSLLYDDEFTKYLQDYPDNFRYDKALSREQKNKKGGKMYVQDKIEE  318 (378)
Q Consensus       239 iaP~~sil~~~~~~~~~~~~~~~~v~L~~g~r~~~~~~~~del~~l~~~~~~~~~~~~~~Sr~~~~~~~~~~~v~~~i~~  318 (378)
                      ||||++|+++++.......++.++++||||+|+.++++|.+||++|.++++++|++++++|+++.+|.+.++|+++.+.+
T Consensus       170 IaP~~s~l~~~~~~~~~~~~~~~~v~L~~g~r~~~d~~~~~el~~l~~~~~~~~~v~~~~sr~~~~~~g~~~~v~~~l~~  249 (310)
T 3vo2_A          170 IAPFRSFLWKMFLEEHEDYKFSGLAWLFLGVPTSDSLLYKEELEKMKEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAE  249 (310)
T ss_dssp             GHHHHHHHHHHHSSCCTTCCCCSEEEEEEEESSGGGCCSHHHHHHHHHHCTTTEEEEEEETTTCBCTTCCBCCHHHHHHT
T ss_pred             hhHHHHHHHHHHHhhcccccCCCcEEEEEEecChhhcccHHHHHHHHHhCCCCEEEEEEECCCCCCCCCcceehHHHHHH
Confidence            99999999999866543333347899999999999999999999999998879999999999988899999999999998


Q ss_pred             hHHHHHhccC-CCeEEEEeCCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHcCCeEEeeC
Q 017070          319 YSDEIFKRLD-GGAHIYFCGLKGMMPGIQETLKRVAEQRGESWDQKLSQLKKNKQWHVEVY  378 (378)
Q Consensus       319 ~~~~l~~~~~-~~~~vyvCGp~~m~~~v~~~L~~~g~~~g~~~~~~~~~l~~~~r~~~e~~  378 (378)
                      ..+++++.+. .+..||+|||++|++++++.|.+++.+.|+++++++++|+++|||++|||
T Consensus       250 ~~~~l~~~l~~~~~~vyvCGp~~M~~~v~~~L~~~~~~~g~~~~~~~~~l~~~~r~~~e~y  310 (310)
T 3vo2_A          250 YREELWELLKKDNTYVYMCGLKGMEKGIDDIMLNLAAKDGIDWMQYKKQLKKGEQWNVEVY  310 (310)
T ss_dssp             THHHHHHHHTSTTEEEEEEESTTHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTTSEEEEEC
T ss_pred             HHHHHHHhcccCCcEEEEeCCHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHCCceEEecC
Confidence            8777766553 68899999999999999999999999999999999999999999999999
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A* Back     alignment and structure
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A* Back     alignment and structure
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP} Back     alignment and structure
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ... Back     alignment and structure
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A* Back     alignment and structure
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A* Back     alignment and structure
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2 Back     alignment and structure
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A* Back     alignment and structure
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2 Back     alignment and structure
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 Back     alignment and structure
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum} Back     alignment and structure
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A* Back     alignment and structure
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis} Back     alignment and structure
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A* Back     alignment and structure
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A* Back     alignment and structure
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A* Back     alignment and structure
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4 Back     alignment and structure
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A* Back     alignment and structure
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A* Back     alignment and structure
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A* Back     alignment and structure
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A* Back     alignment and structure
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A* Back     alignment and structure
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A* Back     alignment and structure
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A* Back     alignment and structure
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 Back     alignment and structure
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4 Back     alignment and structure
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A* Back     alignment and structure
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A* Back     alignment and structure
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B* Back     alignment and structure
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2 Back     alignment and structure
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens} Back     alignment and structure
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus} Back     alignment and structure
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus} Back     alignment and structure
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens} Back     alignment and structure
>1wri_A Ferredoxin II, ferredoxin; electron transport; 1.20A {Equisetum arvense} SCOP: d.15.4.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 378
d1jb9a1157 b.43.4.2 (A:6-162) Ferredoxin reductase (flavodoxi 4e-61
d1jb9a2154 c.25.1.1 (A:163-316) Ferredoxin reductase (flavodo 3e-45
d1fnda2160 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodo 9e-43
d1fnda1136 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodox 1e-37
d2bmwa1133 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxi 2e-37
d2bmwa2162 c.25.1.1 (A:142-303) Ferredoxin reductase (flavodo 2e-37
d1f20a2165 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synth 3e-37
d1ja1a3160 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reducta 8e-35
d1ddga2153 c.25.1.4 (A:447-599) Sulfite reductase flavoprotei 5e-31
d2cnda2146 c.25.1.1 (A:125-270) Nitrate reductase {Corn (Zea 4e-16
d1umka2147 c.25.1.1 (A:154-300) cytochrome b5 reductase {Huma 2e-15
d1gvha3143 c.25.1.5 (A:254-396) Flavohemoglobin, C-terminal d 3e-15
d1cqxa3142 c.25.1.5 (A:262-403) Flavohemoglobin, C-terminal d 4e-14
d1a8pa2158 c.25.1.1 (A:101-258) Ferredoxin reductase (flavodo 8e-14
d1fdra2148 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodo 1e-13
d2piaa2120 c.25.1.2 (A:104-223) Phthalate dioxygenase reducta 2e-11
d1qfja2135 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase 2e-11
d1tvca2141 c.25.1.2 (A:111-251) Methane monooxygenase compone 8e-11
d1krha2133 c.25.1.2 (A:206-338) Benzoate dioxygenase reductas 7e-09
d1ep3b2160 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase 4e-06
d1ddga1221 b.43.4.1 (A:226-446) Sulfite reductase flavoprotei 9e-06
d1ddga1221 b.43.4.1 (A:226-446) Sulfite reductase flavoprotei 0.002
d1f20a1270 b.43.4.1 (A:963-1232) Neuronal nitric-oxide syntha 2e-05
d1f20a1270 b.43.4.1 (A:963-1232) Neuronal nitric-oxide syntha 7e-04
d1ja1a1279 b.43.4.1 (A:240-518) NADPH-cytochrome p450 reducta 0.003
>d1jb9a1 b.43.4.2 (A:6-162) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Maize (Zea mays), root isoform [TaxId: 4577]} Length = 157 Back     information, alignment and structure

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: Ferredoxin reductase FAD-binding domain-like
domain: Ferredoxin reductase (flavodoxin reductase) N-terminal domain
species: Maize (Zea mays), root isoform [TaxId: 4577]

 Score =  192 bits (488), Expect = 4e-61
 Identities = 132/157 (84%), Positives = 146/157 (92%)

Query: 68  SKSKVAVSPLELEERSQPPLNLYKPKEPYTATIVSVERVVGAKAPGETCHIVIDHGGNVP 127
           S+SKV+V+PL LE   +PPLN YKPKEP+TATIVSVE +VG KAPGETCHIVIDHGGNVP
Sbjct: 1   SRSKVSVAPLHLESAKEPPLNTYKPKEPFTATIVSVESLVGPKAPGETCHIVIDHGGNVP 60

Query: 128 YWEGQSYGVIPPGENPKKPGNPHNVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPESGK 187
           YWEGQSYGVIPPGENPKKPG P NVRLYSIASTRYGD+FDG+T SLCVRRAVYYDPE+GK
Sbjct: 61  YWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLCVRRAVYYDPETGK 120

Query: 188 EDPSKSGICSNFLCNSKPGDKVLITGPSGKIMLLPED 224
           EDPSK+G+CSNFLCNSKPGDK+ +TGPSGKIMLLPE+
Sbjct: 121 EDPSKNGVCSNFLCNSKPGDKIQLTGPSGKIMLLPEE 157
>d1jb9a2 c.25.1.1 (A:163-316) Ferredoxin reductase (flavodoxin reductase) {Maize (Zea mays), root isoform [TaxId: 4577]} Length = 154 Back     information, alignment and structure
>d1fnda2 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodoxin reductase) {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 160 Back     information, alignment and structure
>d1fnda1 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 136 Back     information, alignment and structure
>d2bmwa1 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Length = 133 Back     information, alignment and structure
>d2bmwa2 c.25.1.1 (A:142-303) Ferredoxin reductase (flavodoxin reductase) {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Length = 162 Back     information, alignment and structure
>d1f20a2 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 165 Back     information, alignment and structure
>d1ja1a3 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 160 Back     information, alignment and structure
>d1ddga2 c.25.1.4 (A:447-599) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Length = 153 Back     information, alignment and structure
>d2cnda2 c.25.1.1 (A:125-270) Nitrate reductase {Corn (Zea mays) [TaxId: 4577]} Length = 146 Back     information, alignment and structure
>d1umka2 c.25.1.1 (A:154-300) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 147 Back     information, alignment and structure
>d1gvha3 c.25.1.5 (A:254-396) Flavohemoglobin, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 143 Back     information, alignment and structure
>d1cqxa3 c.25.1.5 (A:262-403) Flavohemoglobin, C-terminal domain {Alcaligenes eutrophus [TaxId: 106590]} Length = 142 Back     information, alignment and structure
>d1a8pa2 c.25.1.1 (A:101-258) Ferredoxin reductase (flavodoxin reductase) {Azotobacter vinelandii [TaxId: 354]} Length = 158 Back     information, alignment and structure
>d1fdra2 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodoxin reductase) {Escherichia coli [TaxId: 562]} Length = 148 Back     information, alignment and structure
>d2piaa2 c.25.1.2 (A:104-223) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} Length = 120 Back     information, alignment and structure
>d1qfja2 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} Length = 135 Back     information, alignment and structure
>d1tvca2 c.25.1.2 (A:111-251) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} Length = 141 Back     information, alignment and structure
>d1krha2 c.25.1.2 (A:206-338) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} Length = 133 Back     information, alignment and structure
>d1ep3b2 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} Length = 160 Back     information, alignment and structure
>d1ddga1 b.43.4.1 (A:226-446) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Length = 221 Back     information, alignment and structure
>d1ddga1 b.43.4.1 (A:226-446) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Length = 221 Back     information, alignment and structure
>d1f20a1 b.43.4.1 (A:963-1232) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 270 Back     information, alignment and structure
>d1f20a1 b.43.4.1 (A:963-1232) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 270 Back     information, alignment and structure
>d1ja1a1 b.43.4.1 (A:240-518) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 279 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query378
d1fnda2160 Ferredoxin reductase (flavodoxin reductase) {Spina 99.97
d1jb9a2154 Ferredoxin reductase (flavodoxin reductase) {Maize 99.97
d1ja1a3160 NADPH-cytochrome p450 reductase {Rat (Rattus norve 99.96
d2bmwa2162 Ferredoxin reductase (flavodoxin reductase) {Cyano 99.96
d1f20a2165 Neuronal nitric-oxide synthase FAD/NADP+ domain {R 99.94
d1ddga2153 Sulfite reductase flavoprotein {Escherichia coli [ 99.94
d1tvca2141 Methane monooxygenase component C, MmoC {Methyloco 99.93
d1jb9a1157 Ferredoxin reductase (flavodoxin reductase) N-term 99.92
d1krha2133 Benzoate dioxygenase reductase {Acinetobacter sp. 99.91
d2bmwa1133 Ferredoxin reductase (flavodoxin reductase) N-term 99.91
d1fnda1136 Ferredoxin reductase (flavodoxin reductase) N-term 99.9
d1qfja2135 NAD(P)H:flavin oxidoreductase {Escherichia coli [T 99.89
d1umka2147 cytochrome b5 reductase {Human (Homo sapiens) [Tax 99.88
d1fdra2148 Ferredoxin reductase (flavodoxin reductase) {Esche 99.88
d1cqxa3142 Flavohemoglobin, C-terminal domain {Alcaligenes eu 99.86
d1gvha3143 Flavohemoglobin, C-terminal domain {Escherichia co 99.86
d2cnda2146 Nitrate reductase {Corn (Zea mays) [TaxId: 4577]} 99.85
d1qfja197 NAD(P)H:flavin oxidoreductase {Escherichia coli [T 99.83
d1krha1100 Benzoate dioxygenase reductase {Acinetobacter sp. 99.81
d1fdra199 Ferredoxin reductase (flavodoxin reductase) N-term 99.8
d1a8pa199 Ferredoxin reductase (flavodoxin reductase) N-term 99.79
d1tvca1109 Methane monooxygenase component C, MmoC {Methyloco 99.78
d1a8pa2158 Ferredoxin reductase (flavodoxin reductase) {Azoto 99.78
d2piaa2120 Phthalate dioxygenase reductase {Pseudomonas cepac 99.77
d1ep3b1101 Dihydroorotate dehydrogenase B, PyrK subunit {Lact 99.73
d1gvha2107 Flavohemoglobin, central domain {Escherichia coli 99.72
d2piaa1103 Phthalate dioxygenase reductase {Pseudomonas cepac 99.71
d1cqxa2111 Flavohemoglobin, central domain {Alcaligenes eutro 99.7
d2cnda1114 Nitrate reductase core domain {Corn (Zea mays) [Ta 99.68
d1umka1124 cytochrome b5 reductase {Human (Homo sapiens) [Tax 99.64
d1ep3b2160 Dihydroorotate dehydrogenase B, PyrK subunit {Lact 99.64
d1ddga1221 Sulfite reductase flavoprotein {Escherichia coli [ 99.0
d1f20a1270 Neuronal nitric-oxide synthase FAD/NADP+ domain {R 98.83
d1ja1a1279 NADPH-cytochrome p450 reductase {Rat (Rattus norve 98.61
d1wria_93 2Fe-2S ferredoxin {Equisetum arvense [TaxId: 3258] 93.16
d1frra_95 2Fe-2S ferredoxin {Equisetum arvense [TaxId: 3258] 92.62
d1a70a_97 2Fe-2S ferredoxin {Spinach (Spinacia oleracea) [Ta 91.55
d1awda_94 2Fe-2S ferredoxin {Chlorella fusca [TaxId: 3073]} 90.9
d1czpa_98 2Fe-2S ferredoxin {Cyanobacterium (Anabaena sp.), 90.86
d1krha3104 Benzoate dioxygenase reductase, N-terminal domain 90.61
d1jq4a_98 Methane monooxygenase reductase N-terminal domain 90.39
d1frda_98 2Fe-2S ferredoxin {Cyanobacterium (Anabaena sp.), 90.21
d1iuea_98 2Fe-2S ferredoxin {Malaria parasite (Plasmodium fa 89.93
>d1fnda2 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodoxin reductase) {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ferredoxin reductase-like, C-terminal NADP-linked domain
superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain
family: Reductases
domain: Ferredoxin reductase (flavodoxin reductase)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=99.97  E-value=5.9e-31  Score=224.95  Aligned_cols=154  Identities=53%  Similarity=0.944  Sum_probs=137.6

Q ss_pred             CCCCcEEEEecCCcchhhHHHHHHHHhccCCCcccCCeEEEEEeecCCCCcccHHHHHHHHhhCCCceEEEEEeeccccc
Q 017070          225 NPNATHIMIATGTGIAPFRGYLRRMFMESVPTYKFGGLAWLFLGVANPDSLLYDDEFTKYLQDYPDNFRYDKALSREQKN  304 (378)
Q Consensus       225 ~~~~~vv~IAgGtGiaP~~sil~~~~~~~~~~~~~~~~v~L~~g~r~~~~~~~~del~~l~~~~~~~~~~~~~~Sr~~~~  304 (378)
                      ++.+|+||||||||||||+|||++++.+........++++||||+|+.++++|.+|+.++.++++.++.+.++.+++...
T Consensus         6 d~~~plilIa~GtGIaP~~s~l~~~~~~~~~~~~~~~~i~l~~g~r~~~d~~y~~e~~~~~~~~~~~~~~~~~~s~~~~~   85 (160)
T d1fnda2           6 DPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTN   85 (160)
T ss_dssp             CTTCEEEEEEEGGGGHHHHHHHHHHHSCCBTTBCCCSEEEEEEEESSGGGCTTHHHHHHHHHHCTTTEEEEEEETTTCBC
T ss_pred             CCCCCEEEEECchhHHHHHHHHHHHHHhhcccccCCceEEEEeecCcHHHHHHHHHHHHHHHhcCCceeEEEEEccchhc
Confidence            46789999999999999999999998655443334578999999999999999999999999998788999999999888


Q ss_pred             cCCCccchhHHHHhhHHHHHhcc-CCCeEEEEeCCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHcCCeEEeeC
Q 017070          305 KKGGKMYVQDKIEEYSDEIFKRL-DGGAHIYFCGLKGMMPGIQETLKRVAEQRGESWDQKLSQLKKNKQWHVEVY  378 (378)
Q Consensus       305 ~~~~~~~v~~~i~~~~~~l~~~~-~~~~~vyvCGp~~m~~~v~~~L~~~g~~~g~~~~~~~~~l~~~~r~~~e~~  378 (378)
                      +.+.+++++..+.....++...+ ..++.||+|||++|++++.++|.+++...|.++++++++|+++|||++|+|
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyiCGp~~m~~~v~~~l~~~~~~~g~~a~~~~~~l~~~~ry~~e~~  160 (160)
T d1fnda2          86 EKGEKMYIQTRMAQYAVELWEMLKKDNTYVYMCGLKGMEKGIDDIMVSLAAAEGIDWIEYKRQLKKAEQWNVEVY  160 (160)
T ss_dssp             TTCCBCCHHHHHHTTHHHHHHHHTSTTEEEEEEECHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHTTCEEEEEC
T ss_pred             cCCCcceehhhHHHHHHHHHHhhccCCCEEEEeCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHcCCeEEecC
Confidence            88888999988887776666554 467899999999999999999999999999999999999999999999999
>d1jb9a2 c.25.1.1 (A:163-316) Ferredoxin reductase (flavodoxin reductase) {Maize (Zea mays), root isoform [TaxId: 4577]} Back     information, alignment and structure
>d1ja1a3 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2bmwa2 c.25.1.1 (A:142-303) Ferredoxin reductase (flavodoxin reductase) {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Back     information, alignment and structure
>d1f20a2 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ddga2 c.25.1.4 (A:447-599) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tvca2 c.25.1.2 (A:111-251) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} Back     information, alignment and structure
>d1jb9a1 b.43.4.2 (A:6-162) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Maize (Zea mays), root isoform [TaxId: 4577]} Back     information, alignment and structure
>d1krha2 c.25.1.2 (A:206-338) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} Back     information, alignment and structure
>d2bmwa1 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Back     information, alignment and structure
>d1fnda1 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure
>d1qfja2 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1umka2 c.25.1.1 (A:154-300) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fdra2 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodoxin reductase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1cqxa3 c.25.1.5 (A:262-403) Flavohemoglobin, C-terminal domain {Alcaligenes eutrophus [TaxId: 106590]} Back     information, alignment and structure
>d1gvha3 c.25.1.5 (A:254-396) Flavohemoglobin, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2cnda2 c.25.1.1 (A:125-270) Nitrate reductase {Corn (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1qfja1 b.43.4.2 (A:1-97) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1krha1 b.43.4.2 (A:106-205) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} Back     information, alignment and structure
>d1fdra1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a8pa1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1tvca1 b.43.4.2 (A:2-110) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} Back     information, alignment and structure
>d1a8pa2 c.25.1.1 (A:101-258) Ferredoxin reductase (flavodoxin reductase) {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d2piaa2 c.25.1.2 (A:104-223) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} Back     information, alignment and structure
>d1ep3b1 b.43.4.2 (B:2-102) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} Back     information, alignment and structure
>d1gvha2 b.43.4.2 (A:147-253) Flavohemoglobin, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2piaa1 b.43.4.2 (A:1-103) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} Back     information, alignment and structure
>d1cqxa2 b.43.4.2 (A:151-261) Flavohemoglobin, central domain {Alcaligenes eutrophus [TaxId: 106590]} Back     information, alignment and structure
>d2cnda1 b.43.4.2 (A:11-124) Nitrate reductase core domain {Corn (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1umka1 b.43.4.2 (A:30-153) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ep3b2 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} Back     information, alignment and structure
>d1ddga1 b.43.4.1 (A:226-446) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f20a1 b.43.4.1 (A:963-1232) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ja1a1 b.43.4.1 (A:240-518) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1wria_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Equisetum arvense [TaxId: 3258]} Back     information, alignment and structure
>d1frra_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Equisetum arvense [TaxId: 3258]} Back     information, alignment and structure
>d1a70a_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure
>d1awda_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Chlorella fusca [TaxId: 3073]} Back     information, alignment and structure
>d1czpa_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Cyanobacterium (Anabaena sp.), pcc 7119 and 7120 [TaxId: 1167]} Back     information, alignment and structure
>d1krha3 d.15.4.2 (A:2-105) Benzoate dioxygenase reductase, N-terminal domain {Acinetobacter sp. [TaxId: 472]} Back     information, alignment and structure
>d1jq4a_ d.15.4.2 (A:) Methane monooxygenase reductase N-terminal domain {Methylococcus capsulatus [TaxId: 414]} Back     information, alignment and structure
>d1frda_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Cyanobacterium (Anabaena sp.), pcc 7119 and 7120 [TaxId: 1167]} Back     information, alignment and structure
>d1iuea_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure