Citrus Sinensis ID: 017076

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
Protein Sequence
MATASFSNLPTRAFSPSYHNCHQSFVIKNITRQIPNPHLINFSLTCTSSTPNKNKTCRPTVIFASGGGKGGGGSWGSGGGGGGGDDDAGFHNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHcccccHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHcccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccEEEccccccccccccccccccccEEEEEEEEccccccccEEEEEEcccccccccEEEEEEEcccccccccccEcccccccccccccccccHHHHHHHHHHHcccHHHccHHHHHHHHcccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHccccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
matasfsnlptrafspsyhnchqSFVIKNitrqipnphlinfsltctsstpnknktcrptvifasgggkggggswgsgggggggdddagfhNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVwlpaptislrpplamstgpiakfffncpdnafqvAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALdtsfageaedvpiiSTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRtgntflgslMWVDYARWVGIQKMRE
Flexible Loop (DISEMBL)
matasfsnlptrafspsyHNCHQSFVIKNITRQIPNPHLINFSLTCTSSTPNKNKTCRPTVIFasgggkggggSWGSGGGGGGGDDDAGFHNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE
Low Complexity Region (SEG)
MATASFSNLPTRAFSPSYHNCHQSFVIKNITRQIPNPHLINFSLTCTSSTPNKNKTCRPTVIFAsgggkggggswgsgggggggdddagFHNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE
Disordered region (IsUnstruct)
***************PSYHNCHQSFVIKNITRQIPNPHLINFSLTCTS********CRPTVIF**************************FHNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGI*****
Disordered Region (DISOPRED)
*****************************ITRQIPNPHLIN***************************************************CTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTI**************KFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARK*************PIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQ****
Disordered Region (DISEMBL)
MATASFSNLPTRAFSPSYHNCHQSFVIKNITRQIPNPHLINFSLTCTSSTPNKNKTCRPTVIFASGGGKGGGGSWGSGGGGGGGDDDAGFHNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE
Disordered Region (DISPRO)
*ATASFSNLPTRAFSPSYHNCHQSFVIKNITRQIPNPHLINFSLTCTSSTPNKNKTCRPTVIFASGG*K***************DDDAGFHNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQ****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATASFSNLPTRAFSPSYHNCHQSFVIKNITRQIPNPHLINFSLTCTSSTPNKNKTCRPTVIFASGGGKGGGGSWGSGGGGGGGDDDAGFHNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTxxxxxxxxxxxxxxxxxxxxxVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	378
224059600	382	predicted protein [Populus trichocarpa]	0.992	0.981	0.722	1e-144
255553448	388	conserved hypothetical protein [Ricinus	0.989	0.963	0.698	1e-142
225450009	380	PREDICTED: uncharacterized protein LOC10	0.989	0.984	0.729	1e-142
356542804	372	PREDICTED: uncharacterized protein LOC10	0.761	0.774	0.815	1e-137
356531649	376	PREDICTED: uncharacterized protein LOC10	0.761	0.765	0.819	1e-136
225435391	384	PREDICTED: uncharacterized protein LOC10	0.761	0.75	0.774	1e-133
125552186	297	hypothetical protein OsI_19813 [Oryza sa	0.759	0.966	0.770	1e-130
413945208	387	hypothetical protein ZEAMMB73_229307 [Ze	0.748	0.731	0.763	1e-129
226529786	387	uncharacterized protein LOC100276525 [Ze	0.748	0.731	0.763	1e-129
115463661	378	Os05g0388600 [Oryza sativa Japonica Grou	0.748	0.748	0.777	1e-129

>gi|224059600|ref|XP_002299927.1| predicted protein [Populus trichocarpa] gi|222847185|gb|EEE84732.1| predicted protein [Populus trichocarpa]

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 278/385 (72%), Positives = 311/385 (80%), Gaps = 10/385 (2%)

Query: 1   MATASFSNLPTRAFS---PSYHNCHQSFVIKNITRQIP----NPHLINFSLTCTSSTPNK 53
           MA A+FS   TRAFS   P+YH+ + S     I+  +P     P     S T T+S   +
Sbjct: 1   MAFATFS---TRAFSLQSPNYHHQYHSNNFATISLCVPIPTSKPSATPLSWTTTTSRFKR 57

Query: 54  NKTCRPTVIFASGGGKGGGGSWGSGGGGGGGDDDAGFHNCTEAIFALAKAGRTLGDLPKD 113
            +T          GG GGGG  G GGGG     DAG  N +EAI ALA+ GR+L  LPKD
Sbjct: 58  FRTTIALSSGGGDGGVGGGGISGGGGGGNDDGGDAGSRNKSEAILALAEVGRSLESLPKD 117

Query: 114 LAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFT 173
           LA AIEAGRVP +IV RY ELEKS VFRWLL FGGF+ERLLADDLFL KVA+ECGVG+FT
Sbjct: 118 LAAAIEAGRVPGSIVSRYFELEKSAVFRWLLQFGGFKERLLADDLFLTKVAIECGVGIFT 177

Query: 174 KTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFF 233
           KTAAELERRRENF+KELDFVFADVVMAIIADFMLVWLPAPT+SLRPPLA+S GP++KFF+
Sbjct: 178 KTAAELERRRENFTKELDFVFADVVMAIIADFMLVWLPAPTVSLRPPLALSAGPVSKFFY 237

Query: 234 NCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTS 293
           +CPDNAFQVA  GTSYS +QRIGAI+RNGAKLFAVGT ASLVGVGITNALINARKALD S
Sbjct: 238 SCPDNAFQVALAGTSYSFLQRIGAILRNGAKLFAVGTGASLVGVGITNALINARKALDKS 297

Query: 294 FAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFR 353
           FAGEAEDVPI+STSVAYGVYMAVSSNLRYQ+LAGVIEQR+LEP+LH+ K+IL+AICF  R
Sbjct: 298 FAGEAEDVPILSTSVAYGVYMAVSSNLRYQILAGVIEQRLLEPMLHQQKVILSAICFVVR 357

Query: 354 TGNTFLGSLMWVDYARWVGIQKMRE 378
           TGNTFLGSLMWVDYARWVGIQK+RE
Sbjct: 358 TGNTFLGSLMWVDYARWVGIQKIRE 382

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553448|ref|XP_002517765.1| conserved hypothetical protein [Ricinus communis] gi|223543037|gb|EEF44572.1| conserved hypothetical protein [Ricinus communis]

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 274/392 (69%), Positives = 314/392 (80%), Gaps = 18/392 (4%)

Query: 1   MATASFSNLPTRAFSPSYHNCHQSFVIKNITRQIPNPHLINFSLTCTSSTP----NKNKT 56
           MA A+FSNLPTRA + S H+ +    +   T  + NP +   +++  S+TP    + +  
Sbjct: 1   MAIANFSNLPTRA-ALSLHSGNH---LHRRTFTVINPRITTTTVSKLSTTPLTHSSSHNR 56

Query: 57  CRPTVIFASGGGKGGGGSWGSGGGGGGGDDD----------AGFHNCTEAIFALAKAGRT 106
              T++F+SG G G GG  G  GGGGGG             A   N TEA  ALA+ GR+
Sbjct: 57  FHTTLVFSSGHGGGTGGYGGGSGGGGGGGGGGDGRSDDDSDAESRNRTEAFLALAEVGRS 116

Query: 107 LGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAME 166
           L  LPKDLAGAIEAGR+P +IV RY ELEKSP+FRWLL FGGF+ERLLADDLFL KVA+E
Sbjct: 117 LESLPKDLAGAIEAGRLPGSIVHRYFELEKSPIFRWLLQFGGFKERLLADDLFLTKVAIE 176

Query: 167 CGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTG 226
           CGVG+FTKTAAELE+RRE F+KELDFVFADVVMAIIADFMLVWLPAPT+SLRPPLA+S G
Sbjct: 177 CGVGIFTKTAAELEKRREKFTKELDFVFADVVMAIIADFMLVWLPAPTVSLRPPLAVSAG 236

Query: 227 PIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINA 286
            IAKFF+ CPDNAFQVA  GTSYS +QR+GAIVRNG KLFAVGTSASLVGVG+TN LINA
Sbjct: 237 GIAKFFYTCPDNAFQVALAGTSYSFLQRVGAIVRNGGKLFAVGTSASLVGVGVTNILINA 296

Query: 287 RKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILA 346
           RK LD SFAGEAEDVPI+STS+ YGVYMAVSSNLRYQ+LAGVIEQRILEPLLH++K+IL+
Sbjct: 297 RKILDKSFAGEAEDVPIVSTSIGYGVYMAVSSNLRYQILAGVIEQRILEPLLHQHKVILS 356

Query: 347 AICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 378
           AICFA RTGNTFLGSLMWVDYARWVGIQK+RE
Sbjct: 357 AICFAVRTGNTFLGSLMWVDYARWVGIQKIRE 388

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225450009|ref|XP_002274472.1| PREDICTED: uncharacterized protein LOC100255131 [Vitis vinifera]

 Score =  510 bits (1313), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 280/384 (72%), Positives = 310/384 (80%), Gaps = 10/384 (2%)

Query: 1   MATASFSNLPTRAFSPSYHNCHQSFVIKNIT-RQIPNPHLINFSLTCTSSTPNKNKTCRP 59
           MA A+FSN  +RA S      H S  I ++T R+I    +    LT      +  +   P
Sbjct: 1   MAIATFSNFSSRALSFPTPTPHLSPPILSVTTRRITAASV----LTPPQRIFDSRRYRLP 56

Query: 60  TVIFA-----SGGGKGGGGSWGSGGGGGGGDDDAGFHNCTEAIFALAKAGRTLGDLPKDL 114
           TV+ A     SGG  GGGG  G GGGGGG D DA   N TEAI ALA+ GR+L  LPKDL
Sbjct: 57  TVVLAVGDGGSGGVPGGGGGGGGGGGGGGEDGDAEERNRTEAILALAEMGRSLDSLPKDL 116

Query: 115 AGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTK 174
           A A++AGR+P AIV RY ELEKS VFRWLL FGGF+ERLLADDLFLAKVAMECGVG+FTK
Sbjct: 117 AAAVQAGRIPGAIVSRYFELEKSAVFRWLLQFGGFKERLLADDLFLAKVAMECGVGIFTK 176

Query: 175 TAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFN 234
           TAAELERRRE FSKELDFVFADVVMAIIADFMLVWLPAPT+SL+PPLA+S G +AKFF+ 
Sbjct: 177 TAAELERRREKFSKELDFVFADVVMAIIADFMLVWLPAPTVSLKPPLAVSAGALAKFFYR 236

Query: 235 CPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSF 294
           CPDNAFQVA  GTSYS +QRIGAIVRNGAKLFAVGT ASLVG GITNALINARKA D SF
Sbjct: 237 CPDNAFQVALAGTSYSFLQRIGAIVRNGAKLFAVGTGASLVGTGITNALINARKAFDKSF 296

Query: 295 AGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHENKIILAAICFAFRT 354
           A EAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLH++K++L+A+CFA RT
Sbjct: 297 AAEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLMLSAVCFAVRT 356

Query: 355 GNTFLGSLMWVDYARWVGIQKMRE 378
           GNTFLGSLMWVDYARW+GIQK+RE
Sbjct: 357 GNTFLGSLMWVDYARWIGIQKIRE 380

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542804|ref|XP_003539855.1| PREDICTED: uncharacterized protein LOC100818590 [Glycine max]

 Score =  493 bits (1268), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 235/288 (81%), Positives = 262/288 (90%)

Query: 91  HNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFR 150
            N  EA+  LA+AGR L  LP DLA A+EAGRVP +IVKR  ELEKS VFRWLLNFGGFR
Sbjct: 85  RNREEALLVLAEAGRPLEKLPADLAAAVEAGRVPGSIVKRLFELEKSAVFRWLLNFGGFR 144

Query: 151 ERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWL 210
           ERLLADDLFLAKVAMECGVG+FTKTAAELE+R+ENF+KELDFV ADVVMAI+ADFMLVWL
Sbjct: 145 ERLLADDLFLAKVAMECGVGIFTKTAAELEKRKENFTKELDFVCADVVMAIVADFMLVWL 204

Query: 211 PAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGT 270
           PAPT+SLRPPLA+S G IAKFF+ CP+NAFQVA  GTSYSLIQRIGAIVRNGAKLFAVGT
Sbjct: 205 PAPTVSLRPPLAVSAGTIAKFFYGCPENAFQVALAGTSYSLIQRIGAIVRNGAKLFAVGT 264

Query: 271 SASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIE 330
            ASL+G G+TNALINARK +D SFA EAEDVPIISTS+AYGVYMAVSSNLRYQVLAGVIE
Sbjct: 265 GASLIGTGVTNALINARKVVDKSFAAEAEDVPIISTSIAYGVYMAVSSNLRYQVLAGVIE 324

Query: 331 QRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 378
           QRILEPLLH++K++L+A+CFA RTGNTFLGSL+WVDYARWVG+QK+R+
Sbjct: 325 QRILEPLLHQHKLMLSAVCFAVRTGNTFLGSLLWVDYARWVGVQKIRD 372

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531649|ref|XP_003534389.1| PREDICTED: uncharacterized protein LOC100808020 [Glycine max]

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 236/288 (81%), Positives = 261/288 (90%)

Query: 91  HNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFR 150
            N  EA+  LA+AGR L  LP DLA AI AGRVP +IVKR  ELEKS VFRWLLNFGGFR
Sbjct: 89  RNREEALLVLAEAGRPLEKLPADLAAAIGAGRVPGSIVKRLFELEKSAVFRWLLNFGGFR 148

Query: 151 ERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWL 210
           ERLLADDLFLAKVAMECGVG+FTKTAAELE+R+ENF+KELDFV ADVVMAI+ADFMLVWL
Sbjct: 149 ERLLADDLFLAKVAMECGVGIFTKTAAELEKRKENFTKELDFVCADVVMAIVADFMLVWL 208

Query: 211 PAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGT 270
           PAPT+SLRPPLA+S G IAKFF+ CP+NAFQVA  GTSYSLIQRIGAIVRNGAKLFAVGT
Sbjct: 209 PAPTVSLRPPLAVSAGTIAKFFYGCPENAFQVALAGTSYSLIQRIGAIVRNGAKLFAVGT 268

Query: 271 SASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIE 330
            ASL+G G+TNALINARK +D SFA EAEDVPIISTS+AYGVYMAVSSNLRYQVLAGVIE
Sbjct: 269 GASLIGTGVTNALINARKVVDKSFAAEAEDVPIISTSIAYGVYMAVSSNLRYQVLAGVIE 328

Query: 331 QRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 378
           QRILEPLLH++K++L+AICFA RTGNTFLGSL+WVDYARWVG+QK+R+
Sbjct: 329 QRILEPLLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARWVGVQKIRD 376

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435391|ref|XP_002285363.1| PREDICTED: uncharacterized protein LOC100265633 [Vitis vinifera]

 Score =  479 bits (1233), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 223/288 (77%), Positives = 263/288 (91%)

Query: 91  HNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFR 150
           +N   A+  LA+ GR+L  +PKDLA AIE+G++PAAIV++YLELEKS VFRWLL FGGFR
Sbjct: 94  NNKKAAVLVLAEMGRSLESVPKDLAAAIESGKIPAAIVEKYLELEKSAVFRWLLQFGGFR 153

Query: 151 ERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWL 210
           ERLLADDLFLAKVAMECGVG+FTKTAAE ERRRENF KELDFV ADVVMAIIADFMLVWL
Sbjct: 154 ERLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFFKELDFVIADVVMAIIADFMLVWL 213

Query: 211 PAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGT 270
           PAPT+SLRPPLA+S G IAKFF +CP+NAFQVA  GTS+S +QRIGAIVRNG+KLFAVGT
Sbjct: 214 PAPTVSLRPPLAVSAGAIAKFFHSCPENAFQVALAGTSFSFLQRIGAIVRNGSKLFAVGT 273

Query: 271 SASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIE 330
           ++SLVG  +TNA+INARKA+D+S AGE EDVP++STSVAYGVYMA+SSNLRYQV+AGV+E
Sbjct: 274 TSSLVGTLVTNAIINARKAVDSSSAGEVEDVPVLSTSVAYGVYMAISSNLRYQVVAGVVE 333

Query: 331 QRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 378
           QRILEP+LH++K++L+A+CFA RTGNTFLGSL+WVDYARWVG+QK++E
Sbjct: 334 QRILEPMLHKHKLLLSALCFAVRTGNTFLGSLLWVDYARWVGVQKVQE 381

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125552186|gb|EAY97895.1| hypothetical protein OsI_19813 [Oryza sativa Indica Group]

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 221/287 (77%), Positives = 253/287 (88%)

Query: 88  AGFHNCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFG 147
           A  H   EA+F LA+ GR L  LP DLA AIE GRVP  IV+R+ +LEKS +FRWLL FG
Sbjct: 11  AASHPTREALFVLAQLGRKLESLPADLAAAIEGGRVPGEIVQRFADLEKSGLFRWLLQFG 70

Query: 148 GFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFML 207
           GF+ERLLADDLFLAKVAMECGVG+FTKTAAE ERRRENF KELDFV ADVVMAI+ADFML
Sbjct: 71  GFKERLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFVKELDFVIADVVMAIVADFML 130

Query: 208 VWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFA 267
           VWLPAPT+SL+PPLA++ G IAKFF NCPDNAFQVA  GTSYSL+QR+GAI+RNGAKLFA
Sbjct: 131 VWLPAPTVSLQPPLAVNAGSIAKFFHNCPDNAFQVALAGTSYSLLQRVGAIMRNGAKLFA 190

Query: 268 VGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAG 327
           VGTSASL+G G+TNALI ARKA+   F GE+ED+PI+STSVAYGVYMAVSSNLRYQ+LAG
Sbjct: 191 VGTSASLIGTGVTNALIKARKAVSKDFEGESEDIPIVSTSVAYGVYMAVSSNLRYQILAG 250

Query: 328 VIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQ 374
           VIEQR+LEPLLH +K++L+A+CFA RTGNTFLGSL+WVDYA+W+GIQ
Sbjct: 251 VIEQRMLEPLLHHHKLVLSALCFAVRTGNTFLGSLLWVDYAKWIGIQ 297

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413945208|gb|AFW77857.1| hypothetical protein ZEAMMB73_229307 [Zea mays]

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 216/283 (76%), Positives = 254/283 (89%)

Query: 92  NCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRE 151
           N  EA+F LA+ GR L  LP DLA A+E GR+P  IV+R+++LE SPVFRWLL FGGF+E
Sbjct: 105 NRREALFVLAQLGRKLESLPADLAAAVEGGRIPGEIVRRFVDLEASPVFRWLLQFGGFKE 164

Query: 152 RLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLP 211
           RLLADDLFL KVA+ECGVG+FTKTAAE E+RRENF KELDFV ADVVMAI+ADFMLVWLP
Sbjct: 165 RLLADDLFLTKVAIECGVGIFTKTAAEYEKRRENFVKELDFVIADVVMAIVADFMLVWLP 224

Query: 212 APTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTS 271
           APT+SL+PPLAM++G IAKFF+NCPDNAFQVA +GTSYSL+QR+GAI+RNGAKLFAVGTS
Sbjct: 225 APTVSLQPPLAMNSGAIAKFFYNCPDNAFQVALSGTSYSLLQRVGAILRNGAKLFAVGTS 284

Query: 272 ASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQ 331
           ASL+G G+TNALI AR+A    FAGE E++PI+STSVAYGVYMAVSSNLRYQVLAGVIEQ
Sbjct: 285 ASLIGTGVTNALIKARQAASKDFAGEVENIPILSTSVAYGVYMAVSSNLRYQVLAGVIEQ 344

Query: 332 RILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQ 374
           R+LEPLLH++K++L+A CFA RTGNTFLGSL+W+DYARW+G+Q
Sbjct: 345 RMLEPLLHQHKLVLSAACFAVRTGNTFLGSLLWIDYARWIGVQ 387

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226529786|ref|NP_001143763.1| uncharacterized protein LOC100276525 [Zea mays] gi|195626500|gb|ACG35080.1| hypothetical protein [Zea mays]

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 216/283 (76%), Positives = 254/283 (89%)

Query: 92  NCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRE 151
           N  EA+F LA+ GR L  LP DLA A+E GR+P  IV+R+++LE SPVFRWLL FGGF+E
Sbjct: 105 NRREALFVLAQLGRKLESLPADLAAAVEGGRIPGEIVRRFVDLEASPVFRWLLQFGGFKE 164

Query: 152 RLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLP 211
           RLLADDLFL KVA+ECGVG+FTKTAAE E+RRENF KELDFV ADVVMAI+ADFMLVWLP
Sbjct: 165 RLLADDLFLTKVAIECGVGIFTKTAAEYEKRRENFVKELDFVIADVVMAIVADFMLVWLP 224

Query: 212 APTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTS 271
           APT+SL+PPLAM++G IAKFF+NCPDNAFQVA +GTSYSL+QR+GAI+RNGAKLFAVGTS
Sbjct: 225 APTVSLQPPLAMNSGAIAKFFYNCPDNAFQVALSGTSYSLLQRVGAILRNGAKLFAVGTS 284

Query: 272 ASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQ 331
           ASL+G G+TNALI AR+A    FAGE E++PI+STSVAYGVYMAVSSNLRYQVLAGVIEQ
Sbjct: 285 ASLIGTGVTNALIKARQAASKDFAGEVENIPILSTSVAYGVYMAVSSNLRYQVLAGVIEQ 344

Query: 332 RILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQ 374
           R+LEPLLH++K++L+A CFA RTGNTFLGSL+W+DYARW+G+Q
Sbjct: 345 RMLEPLLHQHKLVLSAACFAVRTGNTFLGSLLWIDYARWIGVQ 387

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115463661|ref|NP_001055430.1| Os05g0388600 [Oryza sativa Japonica Group] gi|54287600|gb|AAV31344.1| unknown protein [Oryza sativa Japonica Group] gi|113578981|dbj|BAF17344.1| Os05g0388600 [Oryza sativa Japonica Group] gi|215740932|dbj|BAG97427.1| unnamed protein product [Oryza sativa Japonica Group] gi|222631454|gb|EEE63586.1| hypothetical protein OsJ_18403 [Oryza sativa Japonica Group]

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 220/283 (77%), Positives = 252/283 (89%)

Query: 92  NCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRE 151
           N  EA+F LA+ GR L  LP DLA AIE GRVP  IV+R+ +LEKS +FRWLL FGGF+E
Sbjct: 96  NRREALFVLAQLGRKLESLPADLAAAIEGGRVPGEIVQRFADLEKSGLFRWLLQFGGFKE 155

Query: 152 RLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLP 211
           RLLADDLFLAKVAMECGVG+FTKTAAE ERRRENF KELDFV ADVVMAI+ADFMLVWLP
Sbjct: 156 RLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFVKELDFVIADVVMAIVADFMLVWLP 215

Query: 212 APTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTS 271
           APT+SL+PPLA++ G IAKFF NCPDNAFQVA  GTSYSL+QR+GAI+RNGAKLFAVGTS
Sbjct: 216 APTVSLQPPLAVNAGSIAKFFHNCPDNAFQVALAGTSYSLLQRVGAIMRNGAKLFAVGTS 275

Query: 272 ASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQ 331
           ASL+G G+TNALI ARKA+   F GE+ED+PI+STSVAYGVYMAVSSNLRYQ+LAGVIEQ
Sbjct: 276 ASLIGTGVTNALIKARKAVSKDFEGESEDIPIVSTSVAYGVYMAVSSNLRYQILAGVIEQ 335

Query: 332 RILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQ 374
           R+LEPLLH +K++L+A+CFA RTGNTFLGSL+WVDYA+W+GIQ
Sbjct: 336 RMLEPLLHHHKLVLSALCFAVRTGNTFLGSLLWVDYAKWIGIQ 378

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	378
TAIR|locus:505006615	386	AT5G12470 "AT5G12470" [Arabido	0.751	0.735	0.732	2.6e-111
TAIR|locus:2063136	735	AT2G40400 [Arabidopsis thalian	0.753	0.387	0.373	1.1e-46
TAIR|locus:2078446	745	AT3G56140 "AT3G56140" [Arabido	0.753	0.382	0.363	2.8e-46
TAIR|locus:2158155	433	RER1 "AT5G22790" [Arabidopsis	0.685	0.598	0.305	2.4e-28
TAIR|locus:2065649	432	LCD1 "AT2G37860" [Arabidopsis	0.682	0.597	0.294	1.9e-26
TAIR|locus:2077828	339	AT3G08630 "AT3G08630" [Arabido	0.613	0.684	0.341	6.6e-26
TAIR|locus:2077838	337	AT3G08640 "AT3G08640" [Arabido	0.574	0.643	0.337	2.2e-25
TAIR|locus:2176826	521	AT5G24690 "AT5G24690" [Arabido	0.669	0.485	0.253	1.2e-11

TAIR|locus:505006615 AT5G12470 "AT5G12470" [Arabidopsis thaliana (taxid:3702)]

 Score = 1099 (391.9 bits), Expect = 2.6e-111, P = 2.6e-111
 Identities = 208/284 (73%), Positives = 247/284 (86%)

Query:    92 NCTEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRE 151
             N  EA+  L ++G  L  LPKDLA AIEAGR+P +++ R+LEL+KS V RWL+ FGGFRE
Sbjct:   101 NRNEAMLLLKESGIELESLPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFGGFRE 160

Query:   152 RLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLP 211
             RLLADDLF+AK+AMECGVG+FTKTAAE ERRRENF  EL+ VFADV MAIIADFMLV+LP
Sbjct:   161 RLLADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLP 220

Query:   212 APTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTS 271
             APT+SLRPPLA++ G I+KFF NCPDNAFQVA +GTSY+L+QR+GAI RNGAKLFAVGT+
Sbjct:   221 APTVSLRPPLALTAGGISKFFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTT 280

Query:   272 ASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGVIEQ 331
             +SLVG  ITNA I ARKA+D +  GE E VPI+STSVAYGVYMAVSSNLRYQ++AGVIEQ
Sbjct:   281 SSLVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVIEQ 340

Query:   332 RILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQK 375
             R+LEP+LH++K+ L+A+CFA RTGNTFLGSL+WVDYAR +GIQK
Sbjct:   341 RLLEPMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQK 384

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2063136 AT2G40400 [Arabidopsis thaliana (taxid:3702)]

 Score = 492 (178.3 bits), Expect = 1.1e-46, P = 1.1e-46
 Identities = 111/297 (37%), Positives = 167/297 (56%)

Query:    92 NC---TEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLN-FG 147
             NC    E    +  AGR    LP+D+   ++ G V   I++ + +LE+ P+   L   F 
Sbjct:   407 NCFDRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRFQ 466

Query:   148 GFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFML 207
             GFRERLLAD  FL ++A+E  + + T   A+ E+R+ENF +ELD+V  D V A + DF  
Sbjct:   467 GFRERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFT 526

Query:   208 VWLPAPTISLRPPLAMSTGP-----IAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNG 262
             VWLPAPT+S       + GP     +     + PDNAFQ +  G  ++L  RI +++  G
Sbjct:   527 VWLPAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGG 586

Query:   263 AKLFAVGTSASLVGVGITNALINARKALDTSFA-GE-AEDVPIISTSVAYGVYMAVSSNL 320
              KL  VG  +S   VG +NAL   RK +      GE A+  P++ T++ YG Y+  SSN+
Sbjct:   587 LKLAGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNI 646

Query:   321 RYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMR 377
             RYQ++AG+IE RI + L  +  +++  I F  R  N++ G+  W+D AR  G+Q  +
Sbjct:   647 RYQIIAGLIEHRISDELSSQ-PLLVNMISFVVRVANSYFGTQQWIDLARSTGLQTQK 702

GO:0009507 "chloroplast" evidence=ISM

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

TAIR|locus:2078446 AT3G56140 "AT3G56140" [Arabidopsis thaliana (taxid:3702)]

 Score = 489 (177.2 bits), Expect = 2.8e-46, P = 2.8e-46
 Identities = 108/297 (36%), Positives = 167/297 (56%)

Query:    92 NC---TEAIFALAKAGRTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLN-FG 147
             NC    E    +  AGR    LP D+   ++ G V   +++   +LE+ P+   L   F 
Sbjct:   416 NCFDRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQRFQ 475

Query:   148 GFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFML 207
             GFRERLLAD  FL ++A+E  + + T   A+ E+R+ENF +E+D+V  D V   + DF  
Sbjct:   476 GFRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFT 535

Query:   208 VWLPAPTISLRPPLAMSTGP-----IAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNG 262
             VWLPAPT+S       +TGP     +     + PDNAFQ +  G  ++L  RI +++  G
Sbjct:   536 VWLPAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGG 595

Query:   263 AKLFAVGTSASLVGVGITNALINARKALDTSF--AGEAEDVPIISTSVAYGVYMAVSSNL 320
              KL  VG  +S   VG +NAL  ARK +      A + +  P++ T++ YG ++  S+NL
Sbjct:   596 LKLAGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANL 655

Query:   321 RYQVLAGVIEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMR 377
             RYQ++AG+IE R+ + L  +  +++ AI F  RT N++ G+  W+D AR  G+Q  +
Sbjct:   656 RYQIIAGLIEHRLSDELSSQ-PLLVNAISFVVRTLNSYFGTQQWIDLARSTGLQTQK 711

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

TAIR|locus:2158155 RER1 "AT5G22790" [Arabidopsis thaliana (taxid:3702)]

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 84/275 (30%), Positives = 140/275 (50%)

Query:   110 LPKDLAGAIEAGRVPAAIVKRYLELEKS--PVFRWLLNFGGFRERLLADDLFLAKVAMEC 167
             LP+D+  A ++  +    + RYL+L+ S  P+   + +    R R+LAD  FL KV  E 
Sbjct:   165 LPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRNRMLADPSFLFKVGTEV 224

Query:   168 GVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGP 227
              +     T AE+++R E+F  E +   AD+++ ++ D  LV L AP   +  P   STG 
Sbjct:   225 AIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGL 284

Query:   228 IAKFFFNC---PDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALI 284
                    C   P + F+    G  +S+ QRI      G    +VG    L+G GI N ++
Sbjct:   285 FKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIANLIM 344

Query:   285 NARKALDTSFAGEAEDVPI---ISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHEN 341
              A++++  S     EDVPI     ++  +GV++ +SSN RYQ++ G+  +R++E      
Sbjct:   345 TAKRSVKKS----EEDVPIPPLFESAALWGVFLGLSSNARYQIINGL--ERVVEGSTAAK 398

Query:   342 KIILAAICFAF--RTGNTFLGSLMWVDYARWVGIQ 374
             +I + A+ F    R  N   G + +VD+A+  G+Q
Sbjct:   399 RIPVVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2065649 LCD1 "AT2G37860" [Arabidopsis thaliana (taxid:3702)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 81/275 (29%), Positives = 142/275 (51%)

Query:   110 LPKDLAGAIEAGRVPAAIVKRYLELEKSP-VFRWLL-NFGGFRERLLADDLFLAKVAMEC 167
             LP D+  A +   +   ++ RYL+L+ S  +  + + ++   R R+LAD  FL K+  E 
Sbjct:   165 LPSDMLEAAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEI 224

Query:   168 GVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGP 227
              +     T AE+++R ++F  E +   AD+++  + +  LV + AP +    P A S G 
Sbjct:   225 VIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSA-SPGF 283

Query:   228 IAK--FFFNC-PDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALI 284
             + +  F +N  P + F+    G  +S  QR+      G    AVG    +VG GI N ++
Sbjct:   284 LGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIM 343

Query:   285 NARKALDTSFAGEAEDVPI---ISTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHEN 341
              A++ ++ S     E++P+   I ++  +GV+++VSSN RYQ++ G+  +R++E      
Sbjct:   344 TAKRNINKS----EENIPVPPLIKSAALWGVFLSVSSNTRYQIINGL--ERVVEASPFAK 397

Query:   342 KIILAAICFAF--RTGNTFLGSLMWVDYARWVGIQ 374
             K   AA+ F    R  N   G + +VD+AR  G Q
Sbjct:   398 KFPPAAMAFTVGVRLANNIYGGMQFVDWARLSGCQ 432

GO:0003674 "molecular_function" evidence=ND

GO:0048366 "leaf development" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2077828 AT3G08630 "AT3G08630" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 85/249 (34%), Positives = 124/249 (49%)

Query:   133 ELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFS-KELD 191
             E E SP     L   G+R R+ AD  F  KV ME  VGV      ++  R  NF   ELD
Sbjct:    89 EEESSPWGPLGLFIQGWRSRVAADSQFPFKVLMEMLVGVSANVLGDMASR-PNFGLNELD 147

Query:   192 FVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSL 251
             FVF+ +V+  I +F L++L AP+         S+  +   F +CP +     F   +++L
Sbjct:   148 FVFSTLVVGSILNFTLMYLLAPSAISHG----SSNLLPGIFRSCPSSHM---FEQGNFTL 200

Query:   252 IQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYG 311
             + R G +V  G     VG +A LVG  I+N LI  RK +D SF    +  P +  S+ + 
Sbjct:   201 MNRFGTLVYKGMVFATVGLAAGLVGTAISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWA 260

Query:   312 VYMAVSSNLRYQVLAGV--IEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYAR 369
              +M VS+N+RYQ L G   + ++ L PL+ +  +I      A R  N  LG + +V  AR
Sbjct:   261 THMGVSANVRYQTLNGAEFLLEKSLPPLVFKTSVI------ALRVVNNVLGGMSFVTLAR 314

Query:   370 WVGIQKMRE 378
               G Q + E
Sbjct:   315 MTGSQSVEE 323

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2077838 AT3G08640 "AT3G08640" [Arabidopsis thaliana (taxid:3702)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 79/234 (33%), Positives = 122/234 (52%)

Query:   148 GFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFS-KELDFVFADVVMAIIADFM 206
             G+R R+ AD  F  KV ME  VG+      ++  R  NF   ELDFVF+ +V+  I +F+
Sbjct:   107 GWRSRVAADPQFPFKVLMEEIVGLSACVLGDMASR-PNFGLNELDFVFSTLVVGSILNFV 165

Query:   207 LVWLPAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLF 266
             L+++ APT +    L  S+  +   F NCP +     F   S++++ R G +V  G    
Sbjct:   166 LMYMLAPTAAT---LG-SSQTLPGIFRNCPSSHM---FEQGSFTVMNRFGTLVYKGMVFA 218

Query:   267 AVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLA 326
             +VG +A LVG  I+N LI  RK +D SF    +  P +  S+ +  +M VS+N RYQ L 
Sbjct:   219 SVGLAAGLVGTAISNGLIMLRKKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLN 278

Query:   327 GV--IEQRILEPLLHENKIILAAICFAFRTGNTFLGSLMWVDYARWVGIQKMRE 378
             G+  +  ++L PL+ +  +I+       R  N   G + +V  AR  G Q + E
Sbjct:   279 GIEFLLAKVLPPLVFKTSVIV------LRCANNVAGGMSFVLLARMTGSQSVEE 326

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2176826 AT5G24690 "AT5G24690" [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 71/280 (25%), Positives = 124/280 (44%)

Query:   105 RTLGDLPKDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFG-------GFRERLLADD 157
             +T+ DLP  L  A E G V +A + ++L +   P    +++          F  R+LAD 
Sbjct:   186 KTMMDLPAGLRQAYEMGLVSSAQMVKFLAINARPTTTRMISRALPQGLSRAFVGRMLADP 245

Query:   158 LFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISL 217
              FL K+ +E    V      E++ R+    +E D    +V+     +   VWL AP  S 
Sbjct:   246 AFLYKLLLEQAATVGCSVWWEVKNRKNRLKEEWDLALINVLTVSACNAAAVWLLAPCRSY 305

Query:   218 RPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGV 277
                       +       P+N F++++    + L +R  ++    A+L  +G +A  +  
Sbjct:   306 GNTFRFD---LQNTLQKLPNNLFEMSYPLREFDLQKRFHSLFYKAAELSILGLAAGTLQG 362

Query:   278 GITNALINARKALDTSFAGEAEDVPIISTS-VAYGVYMAVSSNLRYQVLAGVIEQRILEP 336
              ++N L   +K         +  VP IST+ + YG ++ + +NLRYQ+L G  E+ +   
Sbjct:   363 SLSNVLAGKKKNR------VSVTVPSISTNALGYGAFLGIYANLRYQLLCG-FERGVSS- 414

Query:   337 LLHENKIILAAICF--AFRTGNTFLGSLMWVDYARWVGIQ 374
               H + +I  A+ F  A R  N  LG         W+G++
Sbjct:   415 --HFD-VIGVALFFGTALRIMNVQLGEK---SRQVWLGVE 448


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.137   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      378       353   0.00079  117 3  11 22  0.45    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  214 KB (2118 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.91u 0.09s 28.00t   Elapsed:  00:00:01
  Total cpu time:  27.91u 0.09s 28.00t   Elapsed:  00:00:01
  Start:  Fri May 10 11:11:57 2013   End:  Fri May 10 11:11:58 2013

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	378
pfam11891	179	pfam11891, DUF3411, Domain of unknown function (DU	1e-76
PLN03138	796	PLN03138, PLN03138, Protein TOC75; Provisional	2e-04

>gnl|CDD|221294 pfam11891, DUF3411, Domain of unknown function (DUF3411)

 Score =  234 bits (598), Expect = 1e-76
 Identities = 80/178 (44%), Positives = 109/178 (61%)

Query: 151 ERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWL 210
           ERLLAD  FL K+AME  + +   T AE+E+R ENF  E D V AD+++  + +F LV+L
Sbjct: 1   ERLLADPSFLFKLAMEEVIDICAATVAEVEKRGENFWAEFDLVAADLLVGSVVNFALVYL 60

Query: 211 PAPTISLRPPLAMSTGPIAKFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGT 270
            APT S     A   G + KF  + P N F+    G SYSL QR G +   GAKL AVG 
Sbjct: 61  LAPTRSFGSTAAEMAGGLRKFLGSLPSNVFEKGLPGRSYSLQQRFGTVFYKGAKLAAVGF 120

Query: 271 SASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVAYGVYMAVSSNLRYQVLAGV 328
            A LVG  I+NAL+ ARKA+D +     +  P+  T++ +G ++ VS+NLRYQ+L G+
Sbjct: 121 IAGLVGQAISNALMAARKAVDKNSEESVKVPPLFKTALLWGAFLGVSANLRYQLLNGL 178

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is typically between 168 to 186 amino acids in length. This domain has a conserved RYQ sequence motif. Length = 179

>gnl|CDD|215598 PLN03138, PLN03138, Protein TOC75; Provisional

 Score = 43.3 bits (102), Expect = 2e-04
 Identities = 24/103 (23%), Positives = 34/103 (33%), Gaps = 17/103 (16%)

Query: 4   ASFSNLPTRAFSPSYHNCH------QSFVIKNITRQIPNPHLINFSLTCTSST------- 50
            S S + + A S S  +         S   ++ TR      +   +    SS+       
Sbjct: 2   RSSSTMVSAAASTSLSSSRPQLSSFSSRSPQSATRSPRASSIKCSASASASSSATSSSAS 61

Query: 51  ----PNKNKTCRPTVIFASGGGKGGGGSWGSGGGGGGGDDDAG 89
                         +    GGG GG G +G GGGGGGG     
Sbjct: 62  LVANGAVALLSASAISGGGGGGGGGFGGFGGGGGGGGGGGGGW 104

Length = 796

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	378
PF11891	180	DUF3411: Domain of unknown function (DUF3411); Int	100.0
COG4907	595	Predicted membrane protein [Function unknown]	88.82

>PF11891 DUF3411: Domain of unknown function (DUF3411); InterPro: IPR021825 This presumed domain is functionally uncharacterised

Probab=100.00  E-value=1.9e-75  Score=532.02  Aligned_cols=178  Identities=53%  Similarity=0.801  Sum_probs=174.3

Q ss_pred             hhhccChhhHHHHHHHhhhhhhhhHHHHHhhcccchHhHHHHHHHHHHHHHHHHHHhhhhcccccccCCCcccccC-hhh
Q 017076          151 ERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELDFVFADVVMAIIADFMLVWLPAPTISLRPPLAMSTG-PIA  229 (378)
Q Consensus       151 ~RlLADP~FlfKl~~E~~i~v~~~~~aE~~~Rge~F~~ElDfv~sd~v~g~i~nf~LV~LlAPt~s~~~~~~~~ag-~l~  229 (378)
                      |||||||+|||||++||+||++|+++|||++|||+||+|||||+||+++++|+||+||||||||++++++.+...| .++
T Consensus         1 ~RllADP~Fl~Kl~~E~~i~i~~~~~~e~~~R~e~f~~E~d~v~~d~v~~~i~n~~lv~llAPt~s~~~~~~~~~~~~~~   80 (180)
T PF11891_consen    1 ERLLADPSFLFKLAIEEVIGIGCATAAEYAKRGERFWNELDFVFSDVVVGSIVNFALVWLLAPTRSFGSPAASSPGGGLQ   80 (180)
T ss_pred             CcccccchHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHHhccchHhhCcccccccchHHH
Confidence            7999999999999999999999999999999999999999999999999999999999999999999998775544 999


Q ss_pred             hhhhcCCchhhhcccCCCCcchhhhHHHHhhcchhhhhhhhhhhhhHHHHHHHHHHHHhhcCCCCCCCCCCCcchhhhhh
Q 017076          230 KFFFNCPDNAFQVAFTGTSYSLIQRIGAIVRNGAKLFAVGTSASLVGVGITNALINARKALDTSFAGEAEDVPIISTSVA  309 (378)
Q Consensus       230 k~~~~lP~n~Fq~~~pg~~fsl~qR~~a~~~KG~~l~~VG~~aglvG~glsN~L~~~Rk~~d~~~~~~~~~pP~l~tal~  309 (378)
                      |++++||+|+||+++||++||++||++||+|||++|++|||+||++|+++||+|+++||++||+||+++++||+++||++
T Consensus        81 ~~~~~~P~n~Fq~~~~g~~fsl~qR~~~~~~kg~~l~~VG~~ag~vg~~lsn~L~~~rk~~~~~~e~~~~~ppv~~ta~~  160 (180)
T PF11891_consen   81 KFLGSLPNNAFQKGYPGRSFSLAQRIGAFVYKGAKLAAVGFIAGLVGTGLSNALIAARKKVDPSFEPSVPVPPVLKTALG  160 (180)
T ss_pred             HHHHhChHHHhccCCCCCcccHHHHHHHHHHcchHhhhhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHhhhhccchhhHHHHHHH
Q 017076          310 YGVYMAVSSNLRYQVLAGV  328 (378)
Q Consensus       310 wg~fMGvSSNlRYQil~Gl  328 (378)
                      ||+|||+|||+|||+|||+
T Consensus       161 ~g~fmGvSsNlRYQil~Gi  179 (180)
T PF11891_consen  161 WGAFMGVSSNLRYQILNGI  179 (180)
T ss_pred             HHHHHhhhHhHHHHHHcCC
Confidence            9999999999999999998

This domain is found in eukaryotes. This domain is typically between 168 to 186 amino acids in length. This domain has a conserved RYQ sequence motif.

>COG4907 Predicted membrane protein [Function unknown]

Probab=88.82  E-value=0.25  Score=52.44  Aligned_cols=10  Identities=30%  Similarity=0.398  Sum_probs=4.4

Q ss_pred             eccccCCCCC
Q 017076           28 KNITRQIPNP   37 (378)
Q Consensus        28 ~~~~~~~~~~   37 (378)
                      ||-+|--.++
T Consensus       551 ~nysr~~~~~  560 (595)
T COG4907         551 NNYSRSFNNL  560 (595)
T ss_pred             cchhhhhccc
Confidence            4444444333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	378
2pk2_A	358	Cyclin-T1, protein TAT; TAR, twinning, transcripti	92.98

>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C

Probab=92.98  E-value=0.01  Score=58.09  Aligned_cols=9  Identities=0%  Similarity=-0.164  Sum_probs=3.9

Q ss_pred             ccCCCCCcc
Q 017076           31 TRQIPNPHL   39 (378)
Q Consensus        31 ~~~~~~~~~   39 (378)
                      .+.+..++.
T Consensus       246 ~~~~~~L~~  254 (358)
T 2pk2_A          246 EKTPNRLKR  254 (358)
T ss_dssp             TTCTTHHHH
T ss_pred             HhCcccccc
Confidence            344444443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00