Citrus Sinensis ID: 017084

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------
MKLQKLSVAFKILSFNLIIIILLQVESLTPANNDYAFFDINSLGSSTTAATTPALKPDGGSVKNRSSTSRKPYSSCEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVLFFFFFLNEPIRKFIRIY
ccccccHHHHHHHHHHHHHHHHHcccccccccccccEEEEcccccccccccccccccccccccccccccccccccHHHccHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccEEEccccccEEEEEEccccccEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccHHHHHHHccccccccEEEEEccccccccEEEEEccccccccccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHccccccccccEEEEEEEEEccccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEc
ccHHHHHHHEHHHHHHHEEEEcccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccHccHHHHHHHHHHHHHHHcccEEEccccccEEEEEEccccccEEEEEEcccccccHHcccccccccccccEcccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccHHHHHHccccccccEEEEEEcccccccEEEEEccccEEEcccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEcccccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEcc
MKLQKLSVAFKILSFNLIIIILLQVesltpanndyaffdinslgssttaattpalkpdggsvknrsstsrkpysscevwsRACSKEVMELARRPETVDWLKSVRRTIhqnpelafqEFETSRLLRAELDRMeigykyplaktgirawvgtggppfvalradmdalpiQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQpaeeagngakRMMADGALEDVEAIFAVHVshehptgvigsrpgpllagcGFFHAVIsgkkggaanphrsvdpVLAASAAVISLQGlvsreanpldsQVVSVtyfnggdhldmipDAVVIGGTLRAFSNTSFYQLLQRIEEVLFFFFFLNEPIRKFIRIY
MKLQKLSVAFKILSFNLIIIILLQVESLTPANNDYAFFDINSLGSSTTaattpalkpdggsvknrsstsrkpysscevwsraCSKEVMELARRPETVDWLKSVRRTIhqnpelafqefetSRLLRAELDRMEIGYKYplaktgirawVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVsreanpldSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVLFFFFFLNEPIRKFIRIY
MKLQKLSVAFKILSFNliiiillQVESLTPANNDYAFFDINSLGSSTTAATTPALKPDGGSVKNRSSTSRKPYSSCEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVlffffflNEPIRKFIRIY
*****LSVAFKILSFNLIIIILLQVESLTPANNDYAFFDIN**********************************CEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEA*****RMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGA*****SVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVLFFFFFLNEPIRKFIRI*
******SVAFKILSFNLIIIILLQVESLTPANNDYAFFDINSLGS*****************************************VMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVLFFFFFLNEPIRKFIRIY
MKLQKLSVAFKILSFNLIIIILLQVESLTPANNDYAFFDINSLGSSTTAATTPALK**********************WSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVLFFFFFLNEPIRKFIRIY
*KLQKLSVAFKILSFNLIIIILLQVESLTPANNDYAFFDINSLGSSTTAATTPAL*******************SCEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVLFFFFFLNEPIRKFIRIY
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iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKLQKLSVAFKILSFNLIIIILLQVESLTPANNDYAFFDINSLGSSTTAATTPALKPDGGSVKNRSSTSRKPYSSCEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVLFFFFFLNEPIRKFIRIY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query377 2.2.26 [Sep-21-2011]
Q8VYX0 464 IAA-amino acid hydrolase yes no 0.891 0.724 0.637 1e-125
Q5N8F2 456 IAA-amino acid hydrolase yes no 0.729 0.603 0.658 1e-105
Q5Z678 510 IAA-amino acid hydrolase no no 0.713 0.527 0.661 1e-104
Q8S9S4 442 IAA-amino acid hydrolase no no 0.726 0.619 0.631 1e-100
Q84XG9 442 IAA-amino acid hydrolase N/A no 0.726 0.619 0.627 1e-100
O04373 440 IAA-amino acid hydrolase no no 0.724 0.620 0.608 3e-97
P54970 439 IAA-amino acid hydrolase no no 0.724 0.621 0.603 2e-96
P54969 438 IAA-amino acid hydrolase no no 0.718 0.618 0.597 5e-92
Q9SWX9 435 IAA-amino acid hydrolase no no 0.732 0.634 0.594 5e-92
Q851L6 414 IAA-amino acid hydrolase no no 0.742 0.676 0.558 4e-85
>sp|Q8VYX0|ILL6_ARATH IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsis thaliana GN=ILL6 PE=2 SV=2 Back     alignment and function desciption
 Score =  448 bits (1153), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 232/364 (63%), Positives = 274/364 (75%), Gaps = 28/364 (7%)

Query: 2   KLQKLSVAFKILSFNLIIIILLQV-ESLTPANNDYAFFDINSLGSSTTAATTPALKPDGG 60
           KL  LSV+  I+  +L I   L   E   P NN +                   L+P   
Sbjct: 6   KLNLLSVSLTIIFVSLTIATNLPFFEVKYPNNNPFGML----------------LRPT-- 47

Query: 61  SVKNRSS--TSRKPYSSCEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEF 118
            +KN+S    +      C VW++ACS E++ L  +P+ V WLK VRRTIH+NPELAF+E+
Sbjct: 48  PIKNQSLGLPAHVGSDECRVWTKACSDEILRLTYQPDNVAWLKRVRRTIHENPELAFEEY 107

Query: 119 ETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSK 178
           ETSRL+R+ELDRM I Y+YPLAKTGIRAW+G+GGPPFVA+RADMDALPIQEAVEWE+ SK
Sbjct: 108 ETSRLIRSELDRMGIMYRYPLAKTGIRAWIGSGGPPFVAVRADMDALPIQEAVEWEHISK 167

Query: 179 VAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALED 238
           VAGKMHACGHDAHV ML+GAA ILK+REHLLKGTV+L+FQPAEEAGNGAK M+ DGAL+D
Sbjct: 168 VAGKMHACGHDAHVTMLLGAAHILKAREHLLKGTVVLLFQPAEEAGNGAKNMIEDGALDD 227

Query: 239 VEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKG-GAANPHRSVDPVLAASAA 297
           VEAIFAVHVSH HPTGVIGSR GPLLAGCG F AVI+ +   GAAN       +LAAS+A
Sbjct: 228 VEAIFAVHVSHIHPTGVIGSRSGPLLAGCGIFRAVITSEDSRGAAN------LLLAASSA 281

Query: 298 VISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIE 357
           VISLQG+VSREA+PLDSQVVSVT F+GG  LD+ PD VV+GGT RAFSN+SFY L +RI+
Sbjct: 282 VISLQGIVSREASPLDSQVVSVTSFDGGHSLDVAPDTVVLGGTFRAFSNSSFYYLKKRIQ 341

Query: 358 EVLF 361
           EVL 
Sbjct: 342 EVLM 345
Hydrolyzes certain amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA).
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: -
>sp|Q5N8F2|ILL2_ORYSJ IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sativa subsp. japonica GN=ILL2 PE=2 SV=1 Back     alignment and function description
>sp|Q5Z678|ILL6_ORYSJ IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sativa subsp. japonica GN=ILL6 PE=2 SV=1 Back     alignment and function description
>sp|Q8S9S4|ILL1_ORYSJ IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1 Back     alignment and function description
>sp|Q84XG9|ILL1_ORYSI IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1 Back     alignment and function description
>sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2 Back     alignment and function description
>sp|P54970|ILL2_ARATH IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2 Back     alignment and function description
>sp|P54969|ILL1_ARATH IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsis thaliana GN=ILL1 PE=1 SV=1 Back     alignment and function description
>sp|Q9SWX9|ILL5_ARATH IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana GN=ILL5 PE=3 SV=1 Back     alignment and function description
>sp|Q851L6|ILL4_ORYSJ IAA-amino acid hydrolase ILR1-like 4 OS=Oryza sativa subsp. japonica GN=ILL4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query377
356515913465 PREDICTED: IAA-amino acid hydrolase ILR1 0.830 0.673 0.792 1e-145
357463569476 IAA-amino acid hydrolase ILR1-like prote 0.769 0.609 0.827 1e-143
255545374474 IAA-amino acid hydrolase ILR1 precursor, 0.795 0.632 0.801 1e-143
449464158472 PREDICTED: IAA-amino acid hydrolase ILR1 0.870 0.694 0.733 1e-143
356509389466 PREDICTED: IAA-amino acid hydrolase ILR1 0.755 0.611 0.845 1e-143
224066819477 iaa-amino acid hydrolase 9 [Populus tric 0.925 0.731 0.695 1e-142
359492536 489 PREDICTED: IAA-amino acid hydrolase ILR1 0.875 0.674 0.722 1e-141
302141803 487 unnamed protein product [Vitis vinifera] 0.875 0.677 0.722 1e-141
269980521462 IAA-amino acid hydrolase [Populus toment 0.846 0.690 0.75 1e-139
224082302 509 iaa-amino acid hydrolase 8 [Populus tric 0.851 0.630 0.711 1e-137
>gi|356515913|ref|XP_003526641.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 6-like [Glycine max] Back     alignment and taxonomy information
 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 252/318 (79%), Positives = 277/318 (87%), Gaps = 5/318 (1%)

Query: 48  TAATTPALKPDGGSVKNRSSTSRKPYSS-----CEVWSRACSKEVMELARRPETVDWLKS 102
           +AA    L PD    K  S    +  SS     CEVWS +CS+ V+ +ARRPET +WLK 
Sbjct: 29  SAAYDRVLFPDRRCQKTASENMTRRGSSAAAAECEVWSESCSEAVLSVARRPETAEWLKK 88

Query: 103 VRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADM 162
           +RR IH NPELAF+E ETS L+R ELD ME+ Y+YPLAKTGIRAW+GTGGPPFVA+RADM
Sbjct: 89  IRRKIHANPELAFEEIETSGLIREELDLMEVSYRYPLAKTGIRAWIGTGGPPFVAIRADM 148

Query: 163 DALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEE 222
           DALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILK+REHLLKGTVIL+FQPAEE
Sbjct: 149 DALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKTREHLLKGTVILLFQPAEE 208

Query: 223 AGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAA 282
           AGNGAKRMM DGALEDVEAIFA HVSHEHPTG+IGSRPGPLLAGCGFF AVISGKKG AA
Sbjct: 209 AGNGAKRMMQDGALEDVEAIFAAHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGKKGLAA 268

Query: 283 NPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLR 342
           NPHRSVDPVLAASAAVISLQG+VSREANPLDSQVVSVT FNGG++LDMIPD+VV+ GT R
Sbjct: 269 NPHRSVDPVLAASAAVISLQGIVSREANPLDSQVVSVTSFNGGNNLDMIPDSVVLLGTFR 328

Query: 343 AFSNTSFYQLLQRIEEVL 360
           AFSNTSFYQLL+RIE+V+
Sbjct: 329 AFSNTSFYQLLERIEQVI 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|357463569|ref|XP_003602066.1| IAA-amino acid hydrolase ILR1-like protein [Medicago truncatula] gi|95106143|gb|ABF55223.1| auxin conjugate hydrolase [Medicago truncatula] gi|355491114|gb|AES72317.1| IAA-amino acid hydrolase ILR1-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|255545374|ref|XP_002513747.1| IAA-amino acid hydrolase ILR1 precursor, putative [Ricinus communis] gi|223546833|gb|EEF48330.1| IAA-amino acid hydrolase ILR1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449464158|ref|XP_004149796.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356509389|ref|XP_003523432.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 6-like [Glycine max] Back     alignment and taxonomy information
>gi|224066819|ref|XP_002302231.1| iaa-amino acid hydrolase 9 [Populus trichocarpa] gi|222843957|gb|EEE81504.1| iaa-amino acid hydrolase 9 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359492536|ref|XP_002284503.2| PREDICTED: IAA-amino acid hydrolase ILR1-like 6-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|302141803|emb|CBI19006.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|269980521|gb|ACZ56435.1| IAA-amino acid hydrolase [Populus tomentosa] Back     alignment and taxonomy information
>gi|224082302|ref|XP_002306640.1| iaa-amino acid hydrolase 8 [Populus trichocarpa] gi|222856089|gb|EEE93636.1| iaa-amino acid hydrolase 8 [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query377
TAIR|locus:2823614 464 ILL6 "IAA-leucine resistant (I 0.851 0.691 0.672 1.8e-112
TAIR|locus:2017607 440 IAR3 "AT1G51760" [Arabidopsis 0.742 0.636 0.596 8.6e-88
TAIR|locus:2164976 439 ILL2 "AT5G56660" [Arabidopsis 0.769 0.660 0.585 1.8e-87
TAIR|locus:2017577 435 ILL5 "AT1G51780" [Arabidopsis 0.750 0.650 0.583 2.4e-83
TAIR|locus:2165076 438 ILL1 "AT5G56650" [Arabidopsis 0.716 0.616 0.599 3.1e-83
TAIR|locus:2075382 442 ILR1 "AT3G02875" [Arabidopsis 0.732 0.624 0.532 1.6e-77
TAIR|locus:2166557 428 ILL3 "AT5G54140" [Arabidopsis 0.694 0.612 0.536 1.4e-71
TIGR_CMR|SPO_2468387 SPO_2468 "amidohydrolase famil 0.676 0.658 0.403 3.9e-44
TIGR_CMR|SPO_2810387 SPO_2810 "amidohydrolase famil 0.705 0.687 0.391 2.5e-42
TIGR_CMR|SPO_2808387 SPO_2808 "amidohydrolase famil 0.689 0.671 0.378 5.2e-42
TAIR|locus:2823614 ILL6 "IAA-leucine resistant (ILR)-like gene 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1110 (395.8 bits), Expect = 1.8e-112, P = 1.8e-112
 Identities = 226/336 (67%), Positives = 267/336 (79%)

Query:    27 SLTPANNDYAFFDINSLGSSTTAATTPALKPDGGSVKNRSSTSRKPYSS--CEVWSRACS 84
             SLT A N   FF++    ++        L+P    +KN+S        S  C VW++ACS
Sbjct:    20 SLTIATN-LPFFEVKYPNNNPFGML---LRPT--PIKNQSLGLPAHVGSDECRVWTKACS 73

Query:    85 KEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGI 144
              E++ L  +P+ V WLK VRRTIH+NPELAF+E+ETSRL+R+ELDRM I Y+YPLAKTGI
Sbjct:    74 DEILRLTYQPDNVAWLKRVRRTIHENPELAFEEYETSRLIRSELDRMGIMYRYPLAKTGI 133

Query:   145 RAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKS 204
             RAW+G+GGPPFVA+RADMDALPIQEAVEWE+ SKVAGKMHACGHDAHV ML+GAA ILK+
Sbjct:   134 RAWIGSGGPPFVAVRADMDALPIQEAVEWEHISKVAGKMHACGHDAHVTMLLGAAHILKA 193

Query:   205 REHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLL 264
             REHLLKGTV+L+FQPAEEAGNGAK M+ DGAL+DVEAIFAVHVSH HPTGVIGSR GPLL
Sbjct:   194 REHLLKGTVVLLFQPAEEAGNGAKNMIEDGALDDVEAIFAVHVSHIHPTGVIGSRSGPLL 253

Query:   265 AGCGFFHAVISGKKG-GAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFN 323
             AGCG F AVI+ +   GAAN       +LAAS+AVISLQG+VSREA+PLDSQVVSVT F+
Sbjct:   254 AGCGIFRAVITSEDSRGAANL------LLAASSAVISLQGIVSREASPLDSQVVSVTSFD 307

Query:   324 GGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEV 359
             GG  LD+ PD VV+GGT RAFSN+SFY L +RI+EV
Sbjct:   308 GGHSLDVAPDTVVLGGTFRAFSNSSFYYLKKRIQEV 343
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=ISS
GO:0008152 "metabolic process" evidence=IEA
GO:0008237 "metallopeptidase activity" evidence=ISS
GO:0016787 "hydrolase activity" evidence=IEA
GO:0009850 "auxin metabolic process" evidence=ISS
GO:0010178 "IAA-amino acid conjugate hydrolase activity" evidence=ISS
GO:0010112 "regulation of systemic acquired resistance" evidence=IEP
GO:0009611 "response to wounding" evidence=RCA
GO:0009620 "response to fungus" evidence=RCA
GO:0009694 "jasmonic acid metabolic process" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA
GO:0009753 "response to jasmonic acid stimulus" evidence=RCA
TAIR|locus:2017607 IAR3 "AT1G51760" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164976 ILL2 "AT5G56660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017577 ILL5 "AT1G51780" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165076 ILL1 "AT5G56650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075382 ILR1 "AT3G02875" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166557 ILL3 "AT5G54140" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2468 SPO_2468 "amidohydrolase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2810 SPO_2810 "amidohydrolase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2808 SPO_2808 "amidohydrolase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8VYX0ILL6_ARATH3, ., 5, ., 1, ., -0.63730.89120.7241yesno
Q5N8F2ILL2_ORYSJ3, ., 5, ., 1, ., -0.65810.72940.6030yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query377
PLN02280 478 PLN02280, PLN02280, IAA-amino acid hydrolase 0.0
cd08017377 cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-aceti 1e-171
PLN02693 437 PLN02693, PLN02693, IAA-amino acid hydrolase 1e-123
cd03886372 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 fa 1e-120
COG1473392 COG1473, AbgB, Metal-dependent amidase/aminoacylas 1e-106
cd08019372 cd08019, M20_Acy1_subfamily5, M20 Peptidase Aminoa 1e-103
cd05666373 cd05666, M20_Acy1_like1, M20 Peptidase Aminoacylas 1e-100
TIGR01891363 TIGR01891, amidohydrolases, amidohydrolase 2e-98
cd05669372 cd05669, M20_Acy1_YxeP_like, M20 Peptidase Aminoac 5e-98
cd08660363 cd08660, M20_Acy1_like, M20 Peptidase Aminoacylase 3e-92
cd05664 398 cd05664, M20_Acy1_like6, M20 Peptidase Aminoacylas 2e-81
cd05667402 cd05667, M20_Acy1_like2, M20 Peptidase Aminoacylas 8e-78
cd08014372 cd08014, M20_Acy1_like4, M20 Peptidase Aminoacylas 9e-78
cd05670367 cd05670, M20_Acy1_YkuR_like, M20 Peptidase Aminoac 7e-71
cd08018365 cd08018, M20_Acy1_amhX_like, M20 Peptidase Aminoac 4e-56
cd05668374 cd05668, M20_Acy1_like3, M20 Peptidase Aminoacylas 6e-44
cd05665415 cd05665, M20_Acy1_IAAspH_bact, M20 Peptidases Amin 5e-40
pfam01546310 pfam01546, Peptidase_M20, Peptidase family M20/M25 5e-37
cd03887358 cd03887, M20_Acy1L2, M20 Peptidase Aminoacylase 1- 1e-27
cd03873237 cd03873, Zinc_peptidase_like, Zinc peptidases M18, 1e-25
cd09849388 cd09849, M20_Acy1L2_like_2, M20 Peptidase Aminoacy 8e-25
cd05672358 cd05672, M20_ACY1L2_like, M20 Peptidase Aminoacyla 2e-21
cd05673 434 cd05673, M20_Acy1L2_AbgB, M20 Peptidase Aminoacyla 1e-20
cd08659365 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylo 5e-12
COG0624409 COG0624, ArgE, Acetylornithine deacetylase/Succiny 8e-11
TIGR01910375 TIGR01910, DapE-ArgE, acetylornithine deacetylase 2e-07
pfam07687107 pfam07687, M20_dimer, Peptidase dimerisation domai 2e-04
PRK08588377 PRK08588, PRK08588, succinyl-diaminopimelate desuc 2e-04
TIGR01892364 TIGR01892, AcOrn-deacetyl, acetylornithine deacety 0.001
PRK08651394 PRK08651, PRK08651, succinyl-diaminopimelate desuc 0.002
>gnl|CDD|215158 PLN02280, PLN02280, IAA-amino acid hydrolase Back     alignment and domain information 
 Score =  575 bits (1483), Expect = 0.0
 Identities = 247/362 (68%), Positives = 295/362 (81%), Gaps = 10/362 (2%)

Query: 3   LQKLSVAFKILSFNLIIIILLQVESLTPANN-DYAFFDINSLGSSTTAATTPALKPDGGS 61
           L+ L++    L+ + + + +    S + A+    +FF++     ++       L+    S
Sbjct: 4   LRNLNLLSLSLTISFVSLTISSSSSSSDADPPSLSFFEVKYPNVNSFG---MLLRN---S 57

Query: 62  VKNRSSTSRKPYSS---CEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEF 118
            K   S+      S   CEVW++ACS+ V+ LA +P+TV WLKSVRR IH+NPELAF+E+
Sbjct: 58  PKKNQSSGLPAKPSSDECEVWTKACSEAVLRLAYQPDTVAWLKSVRRKIHENPELAFEEY 117

Query: 119 ETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSK 178
           +TS L+R+ELDRM I Y+YPLAKTGIRAW+GTGGPPFVA+RADMDALPIQEAVEWE+KSK
Sbjct: 118 KTSELVRSELDRMGIMYRYPLAKTGIRAWIGTGGPPFVAVRADMDALPIQEAVEWEHKSK 177

Query: 179 VAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALED 238
           VAGKMHACGHDAHVAML+GAAKILKSREHLLKGTV+L+FQPAEEAGNGAKRM+ DGAL+D
Sbjct: 178 VAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALDD 237

Query: 239 VEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAV 298
           VEAIFAVHVSHEHPT VIGSRPGPLLAGCGFF AVISGKKG A +PH SVD +LAASAAV
Sbjct: 238 VEAIFAVHVSHEHPTAVIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAV 297

Query: 299 ISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEE 358
           ISLQG+VSREANPLDSQVVSVT  +GG++LDMIPD VV+GGT RAFSNTSFYQLL+RI+E
Sbjct: 298 ISLQGIVSREANPLDSQVVSVTTMDGGNNLDMIPDTVVLGGTFRAFSNTSFYQLLKRIQE 357

Query: 359 VL 360
           V+
Sbjct: 358 VI 359

Length = 478
>gnl|CDD|193564 cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-acetic acid amino acid hydrolase Back     alignment and domain information
>gnl|CDD|178296 PLN02693, PLN02693, IAA-amino acid hydrolase Back     alignment and domain information
>gnl|CDD|193507 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family Back     alignment and domain information
>gnl|CDD|224390 COG1473, AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>gnl|CDD|193566 cd08019, M20_Acy1_subfamily5, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193542 cd05666, M20_Acy1_like1, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|233621 TIGR01891, amidohydrolases, amidohydrolase Back     alignment and domain information
>gnl|CDD|193545 cd05669, M20_Acy1_YxeP_like, M20 Peptidase Aminoacyclase-1 YxeP-like proteins, including YxeP, YtnL, YjiB and HipO2 Back     alignment and domain information
>gnl|CDD|193571 cd08660, M20_Acy1_like, M20 Peptidase Aminoacylase 1-like family Back     alignment and domain information
>gnl|CDD|193540 cd05664, M20_Acy1_like6, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193543 cd05667, M20_Acy1_like2, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193562 cd08014, M20_Acy1_like4, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193546 cd05670, M20_Acy1_YkuR_like, M20 Peptidase Aminoacyclase-1 YkuR-like proteins, including YkuR and Ama/HipO/HyuC proteins Back     alignment and domain information
>gnl|CDD|193565 cd08018, M20_Acy1_amhX_like, M20 Peptidase Aminoacylase 1 amhX_like subfamily Back     alignment and domain information
>gnl|CDD|193544 cd05668, M20_Acy1_like3, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193541 cd05665, M20_Acy1_IAAspH_bact, M20 Peptidases Aminoacyclase-1 indole-3-acetic-L-aspartic acid hydrolase from bacteria and archaea Back     alignment and domain information
>gnl|CDD|216562 pfam01546, Peptidase_M20, Peptidase family M20/M25/M40 Back     alignment and domain information
>gnl|CDD|193508 cd03887, M20_Acy1L2, M20 Peptidase Aminoacylase 1-like protein 2, amidohydrolase family Back     alignment and domain information
>gnl|CDD|193495 cd03873, Zinc_peptidase_like, Zinc peptidases M18, M20, M28, and M42 Back     alignment and domain information
>gnl|CDD|193573 cd09849, M20_Acy1L2_like_2, M20 Peptidase Aminoacylase 1-like protein 2, amidohydrolase family Back     alignment and domain information
>gnl|CDD|193547 cd05672, M20_ACY1L2_like, M20 Peptidase Aminoacylase 1-like protein 2-like, amidohydrolase subfamily Back     alignment and domain information
>gnl|CDD|193548 cd05673, M20_Acy1L2_AbgB, M20 Peptidase Aminoacylase 1-like protein 2 aminobenzoyl-glutamate utilization protein B subfamily Back     alignment and domain information
>gnl|CDD|193570 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like Back     alignment and domain information
>gnl|CDD|223697 COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|233632 TIGR01910, DapE-ArgE, acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>gnl|CDD|219515 pfam07687, M20_dimer, Peptidase dimerisation domain Back     alignment and domain information
>gnl|CDD|181490 PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>gnl|CDD|130947 TIGR01892, AcOrn-deacetyl, acetylornithine deacetylase (ArgE) Back     alignment and domain information
>gnl|CDD|236323 PRK08651, PRK08651, succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 377
PLN02280 478 IAA-amino acid hydrolase 100.0
COG1473392 AbgB Metal-dependent amidase/aminoacylase/carboxyp 100.0
PLN02693 437 IAA-amino acid hydrolase 100.0
TIGR01891363 amidohydrolases amidohydrolase. This model represe 100.0
PRK06915422 acetylornithine deacetylase; Validated 100.0
PRK08588377 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK13013427 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK06837427 acetylornithine deacetylase; Provisional 100.0
TIGR01910375 DapE-ArgE acetylornithine deacetylase or succinyl- 100.0
PRK13004 399 peptidase; Reviewed 100.0
PRK06133410 glutamate carboxypeptidase; Reviewed 100.0
PRK07338402 hypothetical protein; Provisional 100.0
TIGR03526 395 selenium_YgeY putative selenium metabolism hydrola 100.0
PRK08596 421 acetylornithine deacetylase; Validated 100.0
PRK13983400 diaminopimelate aminotransferase; Provisional 100.0
PRK13009375 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
TIGR01246370 dapE_proteo succinyl-diaminopimelate desuccinylase 100.0
PRK05111383 acetylornithine deacetylase; Provisional 100.0
PRK07522385 acetylornithine deacetylase; Provisional 100.0
TIGR03320 395 ygeY M20/DapE family protein YgeY. Members of this 100.0
TIGR01892364 AcOrn-deacetyl acetylornithine deacetylase (ArgE). 100.0
TIGR01880400 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase 100.0
TIGR01900373 dapE-gram_pos succinyl-diaminopimelate desuccinyla 100.0
PRK13007352 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK08651394 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK06446436 hypothetical protein; Provisional 100.0
PRK08201456 hypothetical protein; Provisional 100.0
PRK09133472 hypothetical protein; Provisional 100.0
PRK07907449 hypothetical protein; Provisional 100.0
PRK07473376 carboxypeptidase; Provisional 100.0
PRK08652347 acetylornithine deacetylase; Provisional 100.0
PRK08262486 hypothetical protein; Provisional 100.0
PRK09104464 hypothetical protein; Validated 100.0
PRK08737364 acetylornithine deacetylase; Provisional 100.0
TIGR01883361 PepT-like peptidase T-like protein. This model rep 100.0
PRK00466346 acetyl-lysine deacetylase; Validated 100.0
PRK07906426 hypothetical protein; Provisional 100.0
PRK04443348 acetyl-lysine deacetylase; Provisional 100.0
PRK07079 469 hypothetical protein; Provisional 100.0
COG0624409 ArgE Acetylornithine deacetylase/Succinyl-diaminop 100.0
PRK07205444 hypothetical protein; Provisional 100.0
TIGR01886466 dipeptidase dipeptidase PepV. This model represent 100.0
PRK13381404 peptidase T; Provisional 100.0
PRK05469408 peptidase T; Provisional 100.0
PRK07318466 dipeptidase PepV; Reviewed 100.0
KOG2275420 consensus Aminoacylase ACY1 and related metalloexo 100.0
PRK15026 485 aminoacyl-histidine dipeptidase; Provisional 100.0
TIGR01902336 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d 100.0
KOG2276473 consensus Metalloexopeptidases [Amino acid transpo 100.0
PRK12892412 allantoate amidohydrolase; Reviewed 100.0
TIGR01882410 peptidase-T peptidase T. This model represents a t 100.0
PRK12893412 allantoate amidohydrolase; Reviewed 99.98
TIGR01887447 dipeptidaselike dipeptidase, putative. This model 99.98
PRK06156520 hypothetical protein; Provisional 99.97
TIGR01893 477 aa-his-dipept aminoacyl-histidine dipeptidase. 99.97
PRK09290413 allantoate amidohydrolase; Reviewed 99.97
PRK12890414 allantoate amidohydrolase; Reviewed 99.97
PRK12891414 allantoate amidohydrolase; Reviewed 99.97
TIGR01879401 hydantase amidase, hydantoinase/carbamoylase famil 99.96
PRK08554438 peptidase; Reviewed 99.95
PRK13799591 unknown domain/N-carbamoyl-L-amino acid hydrolase 99.94
TIGR03176406 AllC allantoate amidohydrolase. This enzyme cataly 99.94
PRK13590591 putative bifunctional OHCU decarboxylase/allantoat 99.94
PF07687111 M20_dimer: Peptidase dimerisation domain This fami 99.64
COG4187 553 RocB Arginine degradation protein (predicted deacy 99.63
PF01546189 Peptidase_M20: Peptidase family M20/M25/M40 This f 99.51
PRK10199346 alkaline phosphatase isozyme conversion aminopepti 99.5
COG2195414 PepD Di- and tripeptidases [Amino acid transport a 99.46
TIGR03106343 trio_M42_hydro hydrolase, peptidase M42 family. Th 99.39
PRK09961344 exoaminopeptidase; Provisional 99.12
COG1363355 FrvX Cellulase M and related proteins [Carbohydrat 99.01
TIGR03107350 glu_aminopep glutamyl aminopeptidase. This model r 98.94
PRK09864356 putative peptidase; Provisional 98.91
PF04389179 Peptidase_M28: Peptidase family M28; InterPro: IPR 98.03
KOG2194 834 consensus Aminopeptidases of the M20 family [Postt 97.99
KOG3946338 consensus Glutaminyl cyclase [Posttranslational mo 96.15
COG2234435 Iap Predicted aminopeptidases [General function pr 95.72
KOG2195 702 consensus Transferrin receptor and related protein 95.38
PF05343292 Peptidase_M42: M42 glutamyl aminopeptidase; InterP 94.91
PF05450234 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastri 93.45
KOG2526 555 consensus Predicted aminopeptidases - M20/M25/M40 92.92
PRK00913483 multifunctional aminopeptidase A; Provisional 88.98
PF00883311 Peptidase_M17: Cytosol aminopeptidase family, cata 88.34
cd00433468 Peptidase_M17 Cytosol aminopeptidase family, N-ter 87.5
PTZ00412569 leucyl aminopeptidase; Provisional 85.32
PRK05015424 aminopeptidase B; Provisional 84.56
>PLN02280 IAA-amino acid hydrolase Back     alignment and domain information 
Probab=100.00  E-value=6.2e-52  Score=419.42  Aligned_cols=306  Identities=78%  Similarity=1.220  Sum_probs=272.4

Q ss_pred             CCcccCCCCCCC-CC-ccccccchHhHHHHHHhccCcchHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhCCCcEEe
Q 017084           60 GSVKNRSSTSRK-PY-SSCEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKY  137 (377)
Q Consensus        60 ~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~lv~iPs~s~~E~~~~~~l~~~L~~lG~~v~~  137 (377)
                      .+.+||+.+... +. ..|.+|.+.+++.++-...+++..+.+++++++++++||++++|.+++++|.++|+++|+++++
T Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G~~~~~  136 (478)
T PLN02280         57 SPKKNQSSGLPAKPSSDECEVWTKACSEAVLRLAYQPDTVAWLKSVRRKIHENPELAFEEYKTSELVRSELDRMGIMYRY  136 (478)
T ss_pred             CCcccccCCCCCCCCCchhhHhhhhhhHHHHHhhhhHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCeEEe
Confidence            344455554333 44 6699999999998887765577889999999999999999999999999999999999999887


Q ss_pred             ecCCceEEEEecCCCCCeEEEecCcCcccCCCCCCCCcccccCCeEeeCCchHHHHHHHHHHHHHHhcCCCCCceEEEEE
Q 017084          138 PLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIF  217 (377)
Q Consensus       138 ~~~~~~lia~~g~~~~~~I~l~aH~DvVP~~~~~~w~~~p~~~G~l~GrG~~g~~a~~l~a~~~L~~~~~~l~~~I~lif  217 (377)
                      ...++|+++++|++++|+|+|+|||||||+++.++|+|+|.++|++|||||+++++++++++++|++.+.+++++|.|+|
T Consensus       137 ~~~~~~vva~~g~~~~~~I~l~gh~DaVP~~e~~~w~~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if  216 (478)
T PLN02280        137 PLAKTGIRAWIGTGGPPFVAVRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLF  216 (478)
T ss_pred             cCCCCEEEEEECCCCCCEEEEEEecCCCcccCCCCCCCCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEe
Confidence            66788999999654458999999999999988888999999999999999999999999999999987778899999999


Q ss_pred             ecCCCCcCcHHHHHHcCCCCCccEEEEEecCCCCCcceeEeeccccccceeEEEEEEEeeCCCCCCCCCCCcHHHHHHHH
Q 017084          218 QPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAA  297 (377)
Q Consensus       218 ~~dEE~g~Ga~~li~~g~~~~~d~~i~~~~~~~~p~g~i~~~~g~~~ag~~~~~I~v~G~~~Hs~~p~~g~nAI~~~~~~  297 (377)
                      ++|||+|.|++.|+++|.++++|+++++|+.+.+|.+.++.+.+...+|..+++|+++|+++|++.|+.|+|||..|+++
T Consensus       217 ~pdEE~g~Ga~~li~~g~~~~~d~~~~~h~~~~~p~g~ig~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~l  296 (478)
T PLN02280        217 QPAEEAGNGAKRMIGDGALDDVEAIFAVHVSHEHPTAVIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAA  296 (478)
T ss_pred             cccccccchHHHHHHCCCCcCCCEEEEEecCCCCCCceeEecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHH
Confidence            99999988999999999998899999999977778787777777777899999999999999999999999999999999


Q ss_pred             HHHHHhhhccccCCCCCcEEEEEEEeeCcccceecCcEEEEEEEecCChhhHHHHHHHHHHHHhhhhh
Q 017084          298 VISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEVLFFFFF  365 (377)
Q Consensus       298 i~~l~~~~~~~~~~~~~~~~~v~~i~gG~~~NvIP~~~~~~~~iR~~~~~~~e~~~~~i~~~~~~~a~  365 (377)
                      +..++.+..+...+....+++++.++||.+.|+||++|++++++|+.+.++.+++.++|+++++..+.
T Consensus       297 i~~l~~l~~r~~~~~~~~tvnvg~I~GG~~~NvIPd~~~l~~diR~~~~e~~e~l~~~I~~~~~~~a~  364 (478)
T PLN02280        297 VISLQGIVSREANPLDSQVVSVTTMDGGNNLDMIPDTVVLGGTFRAFSNTSFYQLLKRIQEVIVEQAG  364 (478)
T ss_pred             HHHHHHHHhcccCCCCCcEEEEEEEEccCCCCEeCCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999886554455566789999999999999999999999999999999999999999999988653

>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>PLN02693 IAA-amino acid hydrolase Back     alignment and domain information
>TIGR01891 amidohydrolases amidohydrolase Back     alignment and domain information
>PRK06915 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06837 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK13004 peptidase; Reviewed Back     alignment and domain information
>PRK06133 glutamate carboxypeptidase; Reviewed Back     alignment and domain information
>PRK07338 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase Back     alignment and domain information
>PRK08596 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK13983 diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>PRK05111 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK07522 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR03320 ygeY M20/DapE family protein YgeY Back     alignment and domain information
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) Back     alignment and domain information
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase Back     alignment and domain information
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06446 hypothetical protein; Provisional Back     alignment and domain information
>PRK08201 hypothetical protein; Provisional Back     alignment and domain information
>PRK09133 hypothetical protein; Provisional Back     alignment and domain information
>PRK07907 hypothetical protein; Provisional Back     alignment and domain information
>PRK07473 carboxypeptidase; Provisional Back     alignment and domain information
>PRK08652 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK08262 hypothetical protein; Provisional Back     alignment and domain information
>PRK09104 hypothetical protein; Validated Back     alignment and domain information
>PRK08737 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR01883 PepT-like peptidase T-like protein Back     alignment and domain information
>PRK00466 acetyl-lysine deacetylase; Validated Back     alignment and domain information
>PRK07906 hypothetical protein; Provisional Back     alignment and domain information
>PRK04443 acetyl-lysine deacetylase; Provisional Back     alignment and domain information
>PRK07079 hypothetical protein; Provisional Back     alignment and domain information
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07205 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01886 dipeptidase dipeptidase PepV Back     alignment and domain information
>PRK13381 peptidase T; Provisional Back     alignment and domain information
>PRK05469 peptidase T; Provisional Back     alignment and domain information
>PRK07318 dipeptidase PepV; Reviewed Back     alignment and domain information
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase Back     alignment and domain information
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK12892 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR01882 peptidase-T peptidase T Back     alignment and domain information
>PRK12893 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR01887 dipeptidaselike dipeptidase, putative Back     alignment and domain information
>PRK06156 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>PRK09290 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12890 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12891 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>PRK08554 peptidase; Reviewed Back     alignment and domain information
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional Back     alignment and domain information
>TIGR03176 AllC allantoate amidohydrolase Back     alignment and domain information
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional Back     alignment and domain information
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 [] Back     alignment and domain information
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism] Back     alignment and domain information
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional Back     alignment and domain information
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family Back     alignment and domain information
>PRK09961 exoaminopeptidase; Provisional Back     alignment and domain information
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03107 glu_aminopep glutamyl aminopeptidase Back     alignment and domain information
>PRK09864 putative peptidase; Provisional Back     alignment and domain information
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only] Back     alignment and domain information
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG2234 Iap Predicted aminopeptidases [General function prediction only] Back     alignment and domain information
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only] Back     alignment and domain information
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch Back     alignment and domain information
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism] Back     alignment and domain information
>PRK00913 multifunctional aminopeptidase A; Provisional Back     alignment and domain information
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains Back     alignment and domain information
>PTZ00412 leucyl aminopeptidase; Provisional Back     alignment and domain information
>PRK05015 aminopeptidase B; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query377
1xmb_A 418 X-ray Structure Of Iaa-aminoacid Hydrolase From Ara 1e-97
1ysj_A404 Crystal Structure Of Bacillus Subtilis Yxep Protein 7e-52
4ewt_A392 The Crystal Structure Of A Putative Aminohydrolase 7e-42
3io1_A 445 Crystal Structure Of Aminobenzoyl-Glutamate Utiliza 4e-13
3ram_A 394 Crystal Structure Of Hmra Length = 394 8e-06
>pdb|1XMB|A Chain A, X-ray Structure Of Iaa-aminoacid Hydrolase From Arabidopsis Thaliana Gene At5g56660 Length = 418 Back     alignment and structure 
Iteration: 1

 Score =  353 bits (905), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 166/274 (60%), Positives = 214/274 (78%), Gaps = 2/274 (0%)
Query: 86  EVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIR 145
           +++E A+ PE  DW+  +RR IH+NPEL ++E ETS+L+R+EL+ + I Y+YP+A TG+ 
Sbjct: 16  KLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVI 75
Query: 146 AWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSR 205
            ++GTG PPFVALRADMDALPIQE VEWE+KSK+AGKMHACGHD HV ML+GAAKIL   
Sbjct: 76  GYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEH 135
Query: 206 EHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLA 265
            H L+GTV+LIFQPAEE  +GAK+M  +GAL++VEAIF +H+S   P G   SR G  LA
Sbjct: 136 RHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLA 195
Query: 266 GCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGG 325
           G G F AVI+GK G AA P  ++DPV+AAS+ V+SLQ LVSRE +PLDS+VV+V+  NGG
Sbjct: 196 GAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGG 255
Query: 326 DHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEV 359
           +  ++IPD++ IGGTLRAF  T F QL QR++EV
Sbjct: 256 NAFNVIPDSITIGGTLRAF--TGFTQLQQRVKEV 287
>pdb|1YSJ|A Chain A, Crystal Structure Of Bacillus Subtilis Yxep Protein (Apc1829), A Dinuclear Metal Binding Peptidase From M20 Family Length = 404 Back     alignment and structure
>pdb|4EWT|A Chain A, The Crystal Structure Of A Putative Aminohydrolase From Methicillin Resistant Staphylococcus Aureus Length = 392 Back     alignment and structure
>pdb|3IO1|A Chain A, Crystal Structure Of Aminobenzoyl-Glutamate Utilization Protein From Klebsiella Pneumoniae Length = 445 Back     alignment and structure
>pdb|3RAM|A Chain A, Crystal Structure Of Hmra Length = 394 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query377
1xmb_A 418 IAA-amino acid hydrolase homolog 2; structural gen 1e-154
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 1e-129
3io1_A 445 Aminobenzoyl-glutamate utilization protein; peptid 1e-100
3ram_A 394 HMRA protein; two-domain, catalytic (alpha-beta-al 5e-28
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 8e-13
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 2e-11
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 1e-06
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 2e-06
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 7e-05
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 6e-04
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 6e-04
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Length = 418 Back     alignment and structure
 Score =  441 bits (1136), Expect = e-154
 Identities = 167/291 (57%), Positives = 220/291 (75%), Gaps = 4/291 (1%)

Query: 69  SRKPYSSCEVWSRACSKEVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAEL 128
           S  P+ + +  +     +++E A+ PE  DW+  +RR IH+NPEL ++E ETS+L+R+EL
Sbjct: 1   SESPWIAED--TSQIQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSEL 58

Query: 129 DRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGH 188
           + + I Y+YP+A TG+  ++GTG PPFVALRADMDALPIQE VEWE+KSK+AGKMHACGH
Sbjct: 59  ELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGH 118

Query: 189 DAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVS 248
           D HV ML+GAAKIL    H L+GTV+LIFQPAEE  +GAK+M  +GAL++VEAIF +H+S
Sbjct: 119 DGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLS 178

Query: 249 HEHPTGVIGSRPGPLLAGCGFFHAVISGKKGGAANPHRSVDPVLAASAAVISLQGLVSRE 308
              P G   SR G  LAG G F AVI+GK G AA P  ++DPV+AAS+ V+SLQ LVSRE
Sbjct: 179 ARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRE 238

Query: 309 ANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIEEV 359
            +PLDS+VV+V+  NGG+  ++IPD++ IGGTLRAF+   F QL QR++EV
Sbjct: 239 TDPLDSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEV 287
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Length = 404 Back     alignment and structure
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Length = 445 Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Length = 394 Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Length = 393 Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Length = 433 Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Length = 364 Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Length = 356 Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Length = 198 Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Length = 369 Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Length = 396 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query377
3io1_A 445 Aminobenzoyl-glutamate utilization protein; peptid 100.0
1xmb_A 418 IAA-amino acid hydrolase homolog 2; structural gen 100.0
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 100.0
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 100.0
3ram_A 394 HMRA protein; two-domain, catalytic (alpha-beta-al 100.0
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 100.0
3dlj_A485 Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti 100.0
1vgy_A393 Succinyl-diaminopimelate desuccinylase; structural 100.0
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 100.0
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 100.0
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 100.0
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 100.0
3pfe_A472 Succinyl-diaminopimelate desuccinylase; metal bind 100.0
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 100.0
2zog_A479 Cytosolic non-specific dipeptidase; metallopeptida 100.0
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 100.0
2pok_A481 Peptidase, M20/M25/M40 family; M20 family peptidas 100.0
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 100.0
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 100.0
3mru_A 490 Aminoacyl-histidine dipeptidase; metalloprotease, 100.0
1fno_A 417 Peptidase T; metallo peptidase, protease, hydrolas 100.0
3khx_A492 Putative dipeptidase sacol1801; DAPE, metallopepti 100.0
2qyv_A 487 XAA-His dipeptidase; YP_718209.1, structural genom 100.0
1lfw_A470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 100.0
1z2l_A423 Allantoate amidohydrolase; ALLC, purine cataboli a 100.0
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 100.0
2v8h_A 474 Beta-alanine synthase; amidohydrolase, alpha and b 100.0
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 99.93
4h2k_A269 Succinyl-diaminopimelate desuccinylase; DAPE, MCSG 99.92
3t68_A268 Succinyl-diaminopimelate desuccinylase; DAPE, csgi 99.92
2fvg_A340 Endoglucanase; TM1049, structural genomics, joint 99.74
2gre_A349 Deblocking aminopeptidase; structural genomi prote 99.72
1vhe_A373 Aminopeptidase/glucanase homolog; structural genom 99.69
2wyr_A332 Cobalt-activated peptidase TET1; hydrolase, large 99.67
1tkj_A284 Aminopeptidase, SGAP; double-zinc metalloproteinas 99.67
1y0y_A353 FRV operon protein FRVX; aminopeptidase, PDZ, hydr 99.6
1rtq_A299 Bacterial leucyl aminopeptidase; bimetallic, zinc, 99.59
2wzn_A354 TET3, 354AA long hypothetical operon protein FRV; 99.52
1ylo_A348 Hypothetical protein SF2450; structural genomics, 99.52
1vho_A346 Endoglucanase; structural genomics, unknown functi 99.52
3tc8_A309 Leucine aminopeptidase; phosphorylase/hydrolase-li 99.51
3gux_A314 Putative Zn-dependent exopeptidase; aminopeptidase 99.45
3cpx_A321 Aminopeptidase, M42 family; YP_676701.1, putative 99.45
2afw_A329 Glutaminyl-peptide cyclotransferase; alpha-beta pr 99.42
3kl9_A355 PEPA, glutamyl aminopeptidase; tetrahedral aminope 99.18
3pb6_X330 Glutaminyl-peptide cyclotransferase-like protein; 99.13
4fuu_A309 Leucine aminopeptidase; phosphorylase/hydrolase li 99.12
4f9u_A312 CG32412; alpha/beta hydrolase, PGlu formation, PE, 99.07
2vpu_A354 TET3, 354AA long hypothetical operon protein FRV; 99.05
4fai_A330 CG5976, isoform B; alpha/beta hydrolase, PGlu form 99.04
2ek8_A421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 98.47
3iib_A444 Peptidase M28; YP_926796.1, structural genomics, J 98.43
3isx_A343 Endoglucanase; TM1050, structural genomics, joint 98.41
3fed_A 707 Glutamate carboxypeptidase III; metallopeptidase, 97.76
3kas_A 640 Transferrin receptor protein 1; transferrin recept 97.73
3k9t_A435 Putative peptidase; structural genomics, joint cen 89.31
2hc9_A491 Leucine aminopeptidase 1; carbonate, structural ge 85.39
1y7e_A 458 Probable M18-family aminopeptidase 1; aminopeptida 82.11
3isx_A343 Endoglucanase; TM1050, structural genomics, joint 81.85
3jru_B490 Probable cytosol aminopeptidase; bacterial blight, 81.76
1gyt_A503 Cytosol aminopeptidase; hydrolase, DNA recombinati 80.54
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Back     alignment and structure
Probab=100.00  E-value=1.1e-47  Score=386.11  Aligned_cols=275  Identities=28%  Similarity=0.414  Sum_probs=227.6

Q ss_pred             HHHHhccCcchHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhCCCcEEeec--------------------------
Q 017084           86 EVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPL--------------------------  139 (377)
Q Consensus        86 ~~~~~~~~~~~~~~li~~~~~lv~iPs~s~~E~~~~~~l~~~L~~lG~~v~~~~--------------------------  139 (377)
                      ++.+++  +++++++++++++||++||++++|.+++++|.++|+++|+++++..                          
T Consensus         4 ~~~~~~--~~~~~~~~~~~~~lh~~Pe~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (445)
T 3io1_A            4 QLDEYL--RQLAPSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERARE   81 (445)
T ss_dssp             CHHHHH--HTTHHHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHT
T ss_pred             hHHHHH--HHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhcc
Confidence            345567  7889999999999999999999999999999999999999987642                          


Q ss_pred             -------------CCceEEEEecCC-CCCeEEEecCcCcccCCCCCCCCccc-------ccCCeEeeCCchHHHHHHHHH
Q 017084          140 -------------AKTGIRAWVGTG-GPPFVALRADMDALPIQEAVEWEYKS-------KVAGKMHACGHDAHVAMLIGA  198 (377)
Q Consensus       140 -------------~~~~lia~~g~~-~~~~I~l~aH~DvVP~~~~~~w~~~p-------~~~G~l~GrG~~g~~a~~l~a  198 (377)
                                   +++|++++++++ ++|+|+|+|||||||+++.+.|+++|       ..+|++|||||++++++++++
T Consensus        82 ~g~~~~~~~~~~~~~~~vva~~~~~~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~a  161 (445)
T 3io1_A           82 QGAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGL  161 (445)
T ss_dssp             TTCCTTTGGGGTTTCCCEEEEEECSSCCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHHH
T ss_pred             ccccccccccccCCCCEEEEEEeCCCCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHHH
Confidence                         568999999654 57999999999999998888897665       346999999999999999999


Q ss_pred             HHHHHhcCCCCCceEEEEEecCCCCcCcHHHHHHcCCCCCccEEEEEecCCCCCcceeEeeccccccceeEEEEEEEeeC
Q 017084          199 AKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFHAVISGKK  278 (377)
Q Consensus       199 ~~~L~~~~~~l~~~I~lif~~dEE~g~Ga~~li~~g~~~~~d~~i~~~~~~~~p~g~i~~~~g~~~ag~~~~~I~v~G~~  278 (377)
                      ++.|++.+.+++++|.|+|++|||.++|++.|++.|.++++|+++++|+.+..|.|.+.+..+..++ ..+++|+++|++
T Consensus       162 a~~L~~~~~~~~g~v~l~f~p~EE~~~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g~i~~~~~g~~a-~~~~~i~v~Gk~  240 (445)
T 3io1_A          162 AHVLKQYAAQLNGVIKLIFQPAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDNFMA-TTKFDVQFSGVA  240 (445)
T ss_dssp             HHHHHHTGGGCCSEEEEEEESCTTTTCHHHHHHHTTTTTTCSEEEEEEEEEEEETTBEESCCCCBCE-EEEEEEEEECCC
T ss_pred             HHHHHhCcCcCCceEEEEEeccccccchHHHHHHcCCccccceeEEEeccCCCCCCeEEEecCCeeE-EEEEEEEEEeec
Confidence            9999988888999999999999997779999999999989999999998765667777665554443 468999999999


Q ss_pred             CCC-CCCCCCCcHHHHHHHHHHHHHhhhccccCCCCCcEEEEEEEeeCcccceecCcEEEEEEEecCChhhHHHHHHHHH
Q 017084          279 GGA-ANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSVTYFNGGDHLDMIPDAVVIGGTLRAFSNTSFYQLLQRIE  357 (377)
Q Consensus       279 ~Hs-~~p~~g~nAI~~~~~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG~~~NvIP~~~~~~~~iR~~~~~~~e~~~~~i~  357 (377)
                      +|+ +.|+.|+|||..+++++..|+.+. +...  +..+++++.++||.+.|+||++|++++++|+.+.++.+++.++|+
T Consensus       241 ~HaGs~P~~g~nAi~~aa~~i~~l~~l~-~~~~--~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~  317 (445)
T 3io1_A          241 AHAGGKPEDGRNALLAAAQAALGLHAIP-PHSA--GASRVNVGVMQAGTGRNVVPSSALLKVETRGESEAINQYVFERAQ  317 (445)
T ss_dssp             SSTTCCGGGCCCHHHHHHHHHHHHHTCC-CBTT--BCEEEEEEEEEECSCTTSCCCEEEEEEEEEESSHHHHHHHHHHHH
T ss_pred             CCCCCCCcCCcCHHHHHHHHHHHHHHHH-hhcC--CCeEEEEEEEecCCCCceeCCeEEEEEEEecCCHHHHHHHHHHHH
Confidence            999 589999999999999999999873 2222  347899999999999999999999999999999999999999999


Q ss_pred             HHHhhhhhc
Q 017084          358 EVLFFFFFL  366 (377)
Q Consensus       358 ~~~~~~a~~  366 (377)
                      ++++.++..
T Consensus       318 ~~~~~~a~~  326 (445)
T 3io1_A          318 HVVAGAAAM  326 (445)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999987654
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Back     alignment and structure
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} Back     alignment and structure
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Back     alignment and structure
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Back     alignment and structure
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Back     alignment and structure
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Back     alignment and structure
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Back     alignment and structure
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} Back     alignment and structure
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A Back     alignment and structure
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A Back     alignment and structure
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Back     alignment and structure
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Back     alignment and structure
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Back     alignment and structure
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A Back     alignment and structure
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Back     alignment and structure
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... Back     alignment and structure
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} Back     alignment and structure
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* Back     alignment and structure
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A* Back     alignment and structure
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A* Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Back     alignment and structure
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Back     alignment and structure
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum} Back     alignment and structure
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A Back     alignment and structure
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} Back     alignment and structure
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV} Back     alignment and structure
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 377
d1xmba1273 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydro 7e-54
d1ysja1261 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillu 4e-42
d1lfwa2196 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactoba 9e-16
d1xmba2119 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mo 6e-15
d2grea2233 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptid 5e-13
d1ysja2115 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subti 4e-10
d1vgya2113 d.58.19.1 (A:181-293) Succinyl-diaminopimelate des 2e-09
d1cg2a2113 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudom 1e-07
d1z2la2117 d.58.19.1 (A:213-329) Allantoate amidohydrolase Al 3e-07
d1r3na2116 d.58.19.1 (A:248-363) Peptidase-like beta-alanine 1e-04
d1vgya1262 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimel 0.001
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 273 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: IAA-amino acid hydrolase, catalytic domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  177 bits (449), Expect = 7e-54
 Identities = 117/262 (44%), Positives = 158/262 (60%), Gaps = 5/262 (1%)

Query: 86  EVMELARRPETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIR 145
           +++E A+ PE  DW+  +RR IH+NPEL ++E ETS+L+R+EL+ + I Y+YP+A TG+ 
Sbjct: 1   KLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVI 60

Query: 146 AWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSR 205
            ++GTG PPFVALRADMDALPIQE VEWE+KSK+AGKMHACGHD HV ML+GAAKIL   
Sbjct: 61  GYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEH 120

Query: 206 EHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLA 265
            H L+GTV+LIFQPAEE  +GAK+M  +GAL++VEAIF +H+S   P G   SR G  L 
Sbjct: 121 RHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLT 180

Query: 266 GCGFFHAVISGKKG---GAANPHRSVDPVLAASAAVISLQGLVSREANPLDSQVVSV-TY 321
                      K               PV+ +       +  +    + L  Q  +    
Sbjct: 181 VNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAE-TIPGHFSLLGMQDETNGYA 239

Query: 322 FNGGDHLDMIPDAVVIGGTLRA 343
            +      +  D +  G  + A
Sbjct: 240 SSHSPLYRINEDVLPYGAAIHA 261
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 261 Back     information, alignment and structure
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Length = 196 Back     information, alignment and structure
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 119 Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Length = 233 Back     information, alignment and structure
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 115 Back     information, alignment and structure
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]} Length = 113 Back     information, alignment and structure
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]} Length = 113 Back     information, alignment and structure
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]} Length = 117 Back     information, alignment and structure
>d1r3na2 d.58.19.1 (A:248-363) Peptidase-like beta-alanine synthase {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Length = 116 Back     information, alignment and structure
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} Length = 262 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query377
d1xmba1273 IAA-amino acid hydrolase, catalytic domain {Mouse- 100.0
d1ysja1261 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 100.0
d1vgya1262 Succinyl-diaminopimelate desuccinylase, catalytic 99.97
g1q7l.1280 Aminoacylase-1, catalytic domain {Human (Homo sapi 99.94
d1cg2a1276 Carboxypeptidase G2, catalytic domain {Pseudomonas 99.91
d1lfwa1272 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 99.88
d1ysja2115 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 99.77
d1xmba2119 IAA-amino acid hydrolase {Mouse-ear cress (Arabido 99.74
d1vgya2113 Succinyl-diaminopimelate desuccinylase {Neisseria 99.72
d1vhea2275 Hypothetical protein YsdC, catalytic domain {Bacil 99.71
d2grea2233 Deblocking aminopeptidase YhfE {Bacillus cereus [T 99.69
d1yloa2264 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 99.68
d1cg2a2113 Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 99.67
d1vhoa2248 Putative endoglucanase TM1048, catalytic domain {T 99.63
d2fvga2255 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 99.58
d1fnoa4295 Peptidase T (tripeptidase), catalytic domain {Salm 99.53
d1z2la2117 Allantoate amidohydrolase AllC {Escherichia coli [ 99.5
d1lfwa2196 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 99.47
d1r3na2116 Peptidase-like beta-alanine synthase {Yeast (Sacch 99.46
d1tkja1277 Aminopeptidase {Streptomyces griseus [TaxId: 1911] 99.39
d1rtqa_291 Aminopeptidase {Aeromonas proteolytica [TaxId: 671 99.24
d1r3na1322 Peptidase-like beta-alanine synthase, catalytic do 99.17
d1z2la1293 Allantoate amidohydrolase AllC catalytic domain {E 99.14
d3bi1a3304 Glutamate carboxypeptidase II FOLH1 {Human (Homo s 99.0
d2afwa1329 Glutaminyl-peptide cyclotransferase, QPCT {Human ( 98.94
d1de4c3294 Transferrin receptor ectodomain, protease-like dom 98.88
d1fnoa3113 Peptidase T (tripeptidase) {Salmonella typhimurium 97.8
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 97.66
d1y7ea2322 Probable aminopeptidase ApeA {Borrelia burgdorferi 95.9
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 92.19
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: IAA-amino acid hydrolase, catalytic domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.3e-34  Score=269.52  Aligned_cols=180  Identities=59%  Similarity=0.987  Sum_probs=151.4

Q ss_pred             cchHHHHHHHHHHhHcCCCCCcchHHHHHHHHHHHHhCCCcEEeecCCceEEEEecCCCCCeEEEecCcCcccCCCCCCC
Q 017084           94 PETVDWLKSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEW  173 (377)
Q Consensus        94 ~~~~~~li~~~~~lv~iPs~s~~E~~~~~~l~~~L~~lG~~v~~~~~~~~lia~~g~~~~~~I~l~aH~DvVP~~~~~~w  173 (377)
                      +++.+++++++|+||++||++++|.+++++|.++|+++|+++++..+++++++.++++++|+|+|+||||++|..+.+.|
T Consensus         9 ~e~~~~li~~rr~lh~~PEl~~~E~~T~~~i~~~L~~~g~~~~~~~~~tg~~a~~~~~~~~~i~~rad~Dalp~~e~~~~   88 (273)
T d1xmba1           9 PEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEW   88 (273)
T ss_dssp             -------------HHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEECCCBSCCCCCCS
T ss_pred             hHHHHHHHHHHHHHHhCcCcCCcHHHHHHHHHHHHHHCCCeEEecCCceEEEEEECCCcceEEEEeccccccccccccCc
Confidence            67889999999999999999999999999999999999999988777899999998776799999999999999999999


Q ss_pred             CcccccCCeEeeCCchHHHHHHHHHHHHHHhcCCCCCceEEEEEecCCCCcCcHHHHHHcCCCCCccEEEEEecCCCCCc
Q 017084          174 EYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPT  253 (377)
Q Consensus       174 ~~~p~~~G~l~GrG~~g~~a~~l~a~~~L~~~~~~l~~~I~lif~~dEE~g~Ga~~li~~g~~~~~d~~i~~~~~~~~p~  253 (377)
                      +|.+..+|++|+||||+++++++++++.|++...+++++|+|+|+|+||.++|++.|++.|.++++|+++.+|+.+..|.
T Consensus        89 ~~~s~~~g~~HaCGHd~h~a~~l~aa~~l~~~~~~~~g~v~~ifqPaEE~~~Ga~~mi~~G~~~~vd~~~~~H~~~~~~~  168 (273)
T d1xmba1          89 EHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPF  168 (273)
T ss_dssp             TTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEEEEEEEEEEEEET
T ss_pred             ccccCCCCcccccccchHHHHHHHHHHHHHHhhhcCCCeEEEEEecccccccchhHHHHcCCcCCCCeeEEEeecCCCCc
Confidence            99999999999999999999999999999998778999999999999999999999999999999999999999888899


Q ss_pred             ceeEeeccccccceeEEEEE
Q 017084          254 GVIGSRPGPLLAGCGFFHAV  273 (377)
Q Consensus       254 g~i~~~~g~~~ag~~~~~I~  273 (377)
                      |++..+.|..++......++
T Consensus       169 G~i~~~~G~~ma~nd~~~~~  188 (273)
T d1xmba1         169 GKAASRAGSFLTVNNKDLYK  188 (273)
T ss_dssp             TCEEECSEEEEE--------
T ss_pred             chhhcccchhhhhhhhHhHH
Confidence            99999988777655443333
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1r3na2 d.58.19.1 (A:248-363) Peptidase-like beta-alanine synthase {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Back     information, alignment and structure
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Back     information, alignment and structure
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fnoa3 d.58.19.1 (A:208-320) Peptidase T (tripeptidase) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure