Citrus Sinensis ID: 017085

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------
Protein Sequence
MELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKSHLY
Secondary Structure (PSIPRED)
cHHHHHHHHcccEEEEEEcccccccHHHHHHHHHHHHHcccHHccHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHcccccccEEEEEEccccccccHHHHHHHHHHHHHcccEEEEEcHHHHHHHHHHHccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEEccccccHHHHHHHHHHHHHccccccEEEccccccHHHHHHHccEEEEcccccccccHHHHHHHHHccccEEEcccccccccccccccEEEEccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHcccEEEEEEcccccccccccccHHHHHHHcccccccHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHHccccccEEEEEEEccccccccHHHHHHHHHHHHHHHcHEEEccHHHHHHHHHHccccccEEEEEccccHHHccccccccccHccHHHHHHHHcccccccEEEEEEEccccccHHHHHHHHHHHHHHccccccccccEEEEEEcccccccHHHHHHHHHHHHHccccccEEEccccccHHHHHHHccEEEEccccccccHHHHHHHHHHccccEEEEccccccEEEEccccEEEEcccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcHHccc
Coil and Loop (DISEMBL)
MELAFLLRgvgtkvnwitiqkpseedEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAvlkedvprvLPNVLWWIHEMRghyfkldyvkhlplvagamiDSHVTAEYWKNRTRerlrikmpdtyvvHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSvsrgkgqdLFLHSFYESLELIKekklevpsVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFqlpvlgtaaggttEIVVNgttgllhpvgkegitpLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKSHLY
Flexible Loop (DISEMBL)
melafllrgvgtkvnwitiqkpseeDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNrtrerlrikmpdTYVVHLGNSKELMEVAEDNVAKRVLREHvreslgvrnedLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVerrltmgkrGYERVKEIFQEHHMAERIAVVLKEVLKKSKSHLY
Low Complexity Region (SEG)
MELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESlelikekkleVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAvvlkevlkksksHLY
Disordered region (IsUnstruct)
**LAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVL********
Disordered Region (DISOPRED)
MELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEV**K******
Disordered Region (DISEMBL)
MELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVL********
Disordered Region (DISPRO)
MELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSK****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKSHLY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	377	2.2.26 [Sep-21-2011]
Q9R9N2	351	Lipopolysaccharide core b	yes	no	0.578	0.621	0.246	1e-11
D2Q1C4	424	D-inositol 3-phosphate gl	yes	no	0.464	0.412	0.293	2e-09
P46915	377	Spore coat protein SA OS=	yes	no	0.498	0.498	0.281	1e-08
P39862	380	Capsular polysaccharide b	yes	no	0.472	0.468	0.268	7e-08
C7R101	424	D-inositol 3-phosphate gl	yes	no	0.381	0.339	0.287	4e-07
C3PK12	421	D-inositol 3-phosphate gl	yes	no	0.527	0.472	0.260	5e-07
A1R8N8	408	D-inositol 3-phosphate gl	yes	no	0.572	0.529	0.250	7e-07
Q8FSH1	424	D-inositol 3-phosphate gl	yes	no	0.506	0.450	0.275	1e-06
O34413	407	Putative glycosyltransfer	no	no	0.517	0.479	0.283	2e-06
Q8X0H8	471	Alpha-1,3/1,6-mannosyltra	N/A	no	0.251	0.201	0.378	2e-06

>sp|Q9R9N2|LPSB_RHIME Lipopolysaccharide core biosynthesis mannosyltransferase LpsB OS=Rhizobium meliloti (strain 1021) GN=lpsB PE=3 SV=1

 Score = 71.2 bits (173), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 98/239 (41%), Gaps = 21/239 (8%)

Query: 134 IKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQD 193
           + +P+T ++H  ++K      +   AK+        +LG+            V   KG D
Sbjct: 132 LDVPNTVILHGIDTKRFQPPFDKTEAKK--------ALGLDPAKKFVGCFGRVRHQKGTD 183

Query: 194 LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 253
           LF+ S    L          P   A++ G        FESEL+  V +  + DR+ FV +
Sbjct: 184 LFVDSMIALLPC-------RPDWGAIVAGRATGPHLAFESELKERVAKAGLADRILFVGE 236

Query: 254 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGT--TGL 311
              +  +  A+D+ V   Q W E FG   +EAMA  +PV+ T  G  +E+V  G+  TGL
Sbjct: 237 HTNIPDWYRALDLFVA-PQRW-EGFGLTPLEAMATGVPVVATDVGAFSELVTGGSEETGL 294

Query: 312 LHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK 370
           +  +  + +  +            R       G  R  + F     A  IA V + +++
Sbjct: 295 I--IAADDLKAMVDAAAAFMDDRPRLAAASANGLARTSKNFAIEQEARAIAAVYESLMR 351

Acts at transfer of mannose group to a 3-deoxy-D-mono octulonic acid (KDO) via an alpha-1,5 linkage.
Rhizobium meliloti (strain 1021) (taxid: 266834)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -

>sp|D2Q1C4|MSHA_KRIFD D-inositol 3-phosphate glycosyltransferase OS=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) GN=mshA PE=3 SV=1

 Score = 63.9 bits (154), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 9/184 (4%)

Query: 168 RESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA 227
           R ++GVR + ++ A +  +   K  DL + +    LE  ++ +L    V AVI G   N 
Sbjct: 223 RRAVGVREDAIVLAFVGRIQPLKAPDLLIRAAARMLE--RQPELRDRLVVAVIGGPSGNG 280

Query: 228 QTKFESELRNYVMQKKIQDRVHFVNKTL--TVAPYLAAIDVLVQNSQAWGECFGRITIEA 285
               E+       +  + D   FV       +A +  A  V+   S  + E FG + +EA
Sbjct: 281 MEHPEAHA-ELARRLGVDDVTRFVKPMPRPGLADWYRAASVVCVPS--YSESFGLVALEA 337

Query: 286 MAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGY 345
            A   PV+  A GG T  V +G TGLL P    G+   A  +  +AT    R TMGK   
Sbjct: 338 QACGTPVVAAAVGGLTTAVTDGVTGLLVP--GHGVDDFADALAAIATDPGTRETMGKAAV 395

Query: 346 ERVK 349
           E  +
Sbjct: 396 EHAQ 399

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) (taxid: 479435)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|P46915|COTSA_BACSU Spore coat protein SA OS=Bacillus subtilis (strain 168) GN=cotSA PE=1 SV=1

 Score = 61.2 bits (147), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 25/213 (11%)

Query: 164 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 223
           RE +R  LG+  + ++   +  +S+ KG  + L +  + +E       E P V  V IGS
Sbjct: 179 REEMRSELGLHGKKIVL-FVGRLSKVKGPHILLQALPDIIE-------EHPDVMMVFIGS 230

Query: 224 DMNAQTKFESELRNYV--------MQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWG 275
                   ++EL NYV        MQK     + FV K   +       DV V +SQ W 
Sbjct: 231 KWFG----DNELNNYVKHLHTLGAMQKDHVTFIQFV-KPKDIPRLYTMSDVFVCSSQ-WQ 284

Query: 276 ECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTG-LLHPVGKEGITPLAKNIVKLATHV 334
           E   R+  EAMA  LP++ +  GG  E++  G  G ++H    E     A+ I  L +  
Sbjct: 285 EPLARVHYEAMAAGLPIITSNRGGNPEVIEEGKNGYIIHDF--ENPKQYAERINDLLSSS 342

Query: 335 ERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 367
           E+R  +GK      +  F    +AE +  V ++
Sbjct: 343 EKRERLGKYSRREAESNFGWQRVAENLLSVYEK 375

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|P39862|CAPM_STAAU Capsular polysaccharide biosynthesis glycosyltransferase CapM OS=Staphylococcus aureus GN=capM PE=3 SV=1

 Score = 58.5 bits (140), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 27/205 (13%)

Query: 175 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESE 234
           N++ +   +  + + KG    +H   +S ++I  K     +V  ++IGS     +  ES+
Sbjct: 195 NDNFVIGYVGRIVKDKG----IHELIQSFKIIVSKGY---NVKLLVIGSLETENSIDESD 247

Query: 235 L------RNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAF 288
                   N V+ K + D + F N           ++V V  +   G  FG ++IEA A 
Sbjct: 248 YLFLTQNPNVVLIKHVSDPISFYNN----------MNVFVFPTHREG--FGNVSIEAQAL 295

Query: 289 QLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERV 348
           ++PV+ T   G  + VVNG TG +  V K     +A+ I KL      R T+G  G +RV
Sbjct: 296 EVPVITTNVTGAIDTVVNGETGFI--VEKGDFKAIAEKIEKLINDESLRETIGHNGRKRV 353

Query: 349 KEIFQEHHMAERIAVVLKEVLKKSK 373
           +  F    + E +  +    LK+S+
Sbjct: 354 ENKFSSQIIWEELESMYNTFLKESE 378

Required for the biosynthesis of type 1 capsular polysaccharide.

Staphylococcus aureus (taxid: 1280)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|C7R101|MSHA_JONDD D-inositol 3-phosphate glycosyltransferase OS=Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) GN=mshA PE=3 SV=1

 Score = 56.2 bits (134), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 9/153 (5%)

Query: 164 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 223
           R+  R +LG+  E  +      +   KG D+ +    ++L L++ ++ + P    VIIG 
Sbjct: 219 RQAERVALGLAPEGDVIVFAGRIQPLKGPDVLV----DALALLRSQQPDRPMPTLVIIGG 274

Query: 224 DMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRI 281
                     ELR  V Q+ +   V FV      T+A ++   D +   S+   E FG +
Sbjct: 275 PSGRPAAL-GELRARVFQRGVAQHVRFVPPADRPTLAQWMRVADYVAMPSR--NESFGLV 331

Query: 282 TIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHP 314
            IEA A   PV+    GG T  V +  +GLL P
Sbjct: 332 AIEAQACGTPVIAADVGGLTTAVAHKKSGLLVP 364

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) (taxid: 471856)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|C3PK12|MSHA_CORA7 D-inositol 3-phosphate glycosyltransferase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=mshA PE=3 SV=1

 Score = 55.8 bits (133), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 20/219 (9%)

Query: 137 PDT-YVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLF 195
           PD   VV  G   +L     D + +R  R+     LG+     + A +  + + KG D+ 
Sbjct: 187 PDNIVVVSPGADTDLYTPGTDRMTERARRQ-----LGIPLHTKVVAFVGRLQKFKGPDVL 241

Query: 196 LHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL 255
           + +  E +E   +++L V     VI G    A +  ++   N   +  ++  V F++   
Sbjct: 242 IRATAELMERDPDRRLRV-----VICGGASGANSSPDT-YHNLARELGVERVVRFLSPRP 295

Query: 256 T---VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLL 312
               VA Y AA  V V +   + E FG + +EA A   PV+  A GG    V +G TGLL
Sbjct: 296 PQELVAIYQAADIVAVPS---YNESFGLVAMEAQASGTPVVAAAVGGLPIAVADGDTGLL 352

Query: 313 HPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEI 351
             V        A  + +L     RR++MG+   +  ++ 
Sbjct: 353 --VHSHSAQDWADALEQLLDDDPRRISMGEAAVDHAQQF 389

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) (taxid: 548476)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|A1R8N8|MSHA_ARTAT D-inositol 3-phosphate glycosyltransferase OS=Arthrobacter aurescens (strain TC1) GN=mshA PE=3 SV=1

 Score = 55.5 bits (132), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 35/251 (13%)

Query: 138 DTYVVHLGNSKELMEVAEDNVAKRVL----REHVRESLGVRNEDLLFAIINSVSRGKGQD 193
           D  V H G   + ++VA   V  +V     R   R   GVR +         + R KG  
Sbjct: 176 DELVSHYGADLDRIDVAPPGVDLKVFTPSFRRKSRSLRGVRPDSFHILFAGRIQRLKGPQ 235

Query: 194 LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 253
           +F+    ++  ++++++ ++  +   I+GS   A+   +  L++++    + D V   ++
Sbjct: 236 VFV----KAAGILRKRRPDI-DLEMTILGSLSGAK---DFNLQHFIEDAGLADVV--THR 285

Query: 254 TLTVAPYLAA----IDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTT 309
              VAP LA+     DV+V  S  + E FG + +EA A   PV+ T  GG +  + +G T
Sbjct: 286 PPVVAPELASWFRSADVVVMPS--FSESFGLVALEAQACGTPVVATNVGGLSRAISDGRT 343

Query: 310 GLL----HPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL 365
           G+L    HP      +  A  +  L   V+ R  MG     R+     E    +R A + 
Sbjct: 344 GILVDGHHP------SDWADALEDLYDDVQTREDMG-----RLAATHAESFGWQRTAAIT 392

Query: 366 KEVLKKSKSHL 376
            E  +++ S L
Sbjct: 393 LESYREAVSGL 403

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Arthrobacter aurescens (strain TC1) (taxid: 290340)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|Q8FSH1|MSHA_COREF D-inositol 3-phosphate glycosyltransferase OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) GN=mshA PE=3 SV=1

 Score = 54.7 bits (130), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 87/214 (40%), Gaps = 23/214 (10%)

Query: 141 VVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFY 200
           VV  G    L     D   +R  RE     LGV     + A +  +   KG  + +H+  
Sbjct: 192 VVSPGADIALYTPGNDRATERSRRE-----LGVPLHAKVVAFVGRLQPFKGPQVLIHAVA 246

Query: 201 ESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLT---V 257
           E LE   ++ L V     +I G         E+  RN  ++  +  R+ F++       V
Sbjct: 247 ELLERDPQRNLRV-----LICGGPSGPSATPET-YRNLAVELGVDKRIRFLDPRPPEELV 300

Query: 258 APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGK 317
           A Y AA D++   S  + E FG + +EA A   PV+    GG    V  G TGLL     
Sbjct: 301 AVYRAA-DIIAVPS--YNESFGLVAMEAQATGTPVVAARVGGLPVAVAEGETGLL----V 353

Query: 318 EGITPL--AKNIVKLATHVERRLTMGKRGYERVK 349
           +G  P   A  +  L    E R+ MG+   E  +
Sbjct: 354 DGHDPALWADTLATLLDDDETRIRMGQDAVEHAR 387

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) (taxid: 196164)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|O34413|YTCC_BACSU Putative glycosyltransferase YtcC OS=Bacillus subtilis (strain 168) GN=ytcC PE=3 SV=1

 Score = 53.9 bits (128), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 17/212 (8%)

Query: 163 LREHVRESLGVRNED-LLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII 221
           +R+  R+  G+ ++  +LFA    +S  KG  L +HS    L+       + P    VI 
Sbjct: 178 VRKTYRKKYGIEDKKVILFA--GRLSPTKGPHLLIHSMRRILQ-------QHPDAVLVIA 228

Query: 222 GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVA---PYLAAI-DVLVQNSQAWGEC 277
           G    +    E++   Y+    +  R H +      A   P L  + DV V +SQ W E 
Sbjct: 229 GGKWFSDDS-ENQYVTYLRTLALPYRDHIIFTKFIPADDIPNLFLMADVFVCSSQ-WNEP 286

Query: 278 FGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERR 337
             R+  EAMA   P++ T  GG  E+V +  TGL+     +  +  AK I +  T  E  
Sbjct: 287 LARVNYEAMAAGTPLITTNRGGNGEVVKHEVTGLVIDSYNKP-SSFAKAIDRAFTDQELM 345

Query: 338 LTMGKRGYERVKEIFQEHHMAERIAVVLKEVL 369
             M K   + V+ +F   H A+R+  V + VL
Sbjct: 346 NKMTKNARKHVEALFTFTHAAKRLNTVYQSVL 377

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q8X0H8|ALG2_NEUCR Alpha-1,3/1,6-mannosyltransferase alg-2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=alg-2 PE=3 SV=1

 Score = 53.5 bits (127), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 47/95 (49%)

Query: 276 ECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVE 335
           E FG + +EAM   +PVL    GG TE VV G TG L      G      + V      E
Sbjct: 345 EHFGIVPLEAMLRGVPVLAANNGGPTETVVEGETGWLRDPNDVGEWAKVMDKVLNGMGEE 404

Query: 336 RRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK 370
               MGK+G ERVK  F +  MAER+  +++ + K
Sbjct: 405 ELKRMGKKGVERVKGRFADTQMAERLEEIIERMPK 439

Mannosylates Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	377
224133786	481	predicted protein [Populus trichocarpa]	0.976	0.765	0.883	0.0
302142552	463	unnamed protein product [Vitis vinifera]	0.981	0.799	0.840	0.0
225458171	479	PREDICTED: uncharacterized protein LOC10	0.981	0.772	0.840	0.0
147771878	495	hypothetical protein VITISV_033235 [Viti	0.960	0.731	0.850	0.0
255538754	477	glycosyltransferase, putative [Ricinus c	0.973	0.769	0.850	0.0
356518559	464	PREDICTED: uncharacterized protein LOC10	0.970	0.788	0.833	0.0
449436130	472	PREDICTED: uncharacterized protein LOC10	0.976	0.779	0.809	1e-178
356564312	833	PREDICTED: proteasome-activating nucleot	0.962	0.435	0.818	1e-177
255648383	463	unknown [Glycine max]	0.965	0.786	0.818	1e-176
225431277	466	PREDICTED: uncharacterized protein LOC10	0.976	0.789	0.809	1e-175

>gi|224133786|ref|XP_002327680.1| predicted protein [Populus trichocarpa] gi|222836765|gb|EEE75158.1| predicted protein [Populus trichocarpa]

 Score =  677 bits (1747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/368 (88%), Positives = 350/368 (95%)

Query: 8   RGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAV 67
           R VGT+V WITIQKPSE DEV+YSLE KM  RGVQV+SAKGQE I+TA KADL+VLNTAV
Sbjct: 111 RSVGTEVFWITIQKPSETDEVVYSLEQKMLVRGVQVLSAKGQEAIDTAFKADLVVLNTAV 170

Query: 68  AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNR 127
           AGKWLDAVLKE+VPRVLP VLWWIHEMRGHYFKLDYVKHLPLV GAMIDSHVTAEYWKNR
Sbjct: 171 AGKWLDAVLKENVPRVLPKVLWWIHEMRGHYFKLDYVKHLPLVGGAMIDSHVTAEYWKNR 230

Query: 128 TRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS 187
           T+ERLRIKMP+TYVVHLGNSKELMEVAED+VAKRVLREH+RESLGVR+ED+LFAIINSVS
Sbjct: 231 TQERLRIKMPETYVVHLGNSKELMEVAEDSVAKRVLREHIRESLGVRDEDILFAIINSVS 290

Query: 188 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 247
           RGKGQDLFL SFYESL++I+ KKL+VPS+HAVI+GSDM+AQTKFE+ELRNYVMQK IQDR
Sbjct: 291 RGKGQDLFLRSFYESLQIIQVKKLKVPSMHAVIVGSDMSAQTKFETELRNYVMQKNIQDR 350

Query: 248 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 307
           VHF+NKTLTVAPYLAAIDVLVQNSQA GECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG
Sbjct: 351 VHFINKTLTVAPYLAAIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 410

Query: 308 TTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 367
           TTGLLH VGKEG+TPLAKNIVKLATHVERRLTMGKRGYERV+E+F EHHMA RIA VLKE
Sbjct: 411 TTGLLHSVGKEGVTPLAKNIVKLATHVERRLTMGKRGYERVREMFLEHHMAHRIASVLKE 470

Query: 368 VLKKSKSH 375
           VL+KSKSH
Sbjct: 471 VLRKSKSH 478

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142552|emb|CBI19755.3| unnamed protein product [Vitis vinifera]

 Score =  659 bits (1699), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/370 (84%), Positives = 348/370 (94%)

Query: 8   RGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAV 67
           RGVG +V W+TIQKP++ DEVIYSLEH+M DRGV+V  AKGQE I+TALKADL+VLNTAV
Sbjct: 93  RGVGAEVVWLTIQKPTDSDEVIYSLEHRMLDRGVKVFPAKGQEAIDTALKADLVVLNTAV 152

Query: 68  AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNR 127
           AGKWLD+V+KE+VPR+LP VLWWIHEMRGHYFKL+YVKHLP VAGAMIDSH TAEYWKNR
Sbjct: 153 AGKWLDSVVKENVPRILPKVLWWIHEMRGHYFKLEYVKHLPYVAGAMIDSHTTAEYWKNR 212

Query: 128 TRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS 187
           TRERL IKMP+TYVVHLGNSKELME+AE+NVAKRVLREHVRESLGVRNEDLLFA+INSVS
Sbjct: 213 TRERLGIKMPETYVVHLGNSKELMEIAENNVAKRVLREHVRESLGVRNEDLLFAVINSVS 272

Query: 188 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 247
           RGKGQDLFL SFY+SL+LIK +KL+VPS+HAVI+GSDMNAQTKFE+ELRN+V++ KIQD+
Sbjct: 273 RGKGQDLFLRSFYQSLQLIKGRKLQVPSIHAVIVGSDMNAQTKFETELRNFVVENKIQDQ 332

Query: 248 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 307
           VHF+NKTLTVAPYLA+IDVLVQNSQA GECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG
Sbjct: 333 VHFINKTLTVAPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 392

Query: 308 TTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 367
           TTGLLH VGKEG+ PLA NIVKLAT+VERRLTMGKRGYERVKE F EHHM+ERIA VLKE
Sbjct: 393 TTGLLHNVGKEGVKPLANNIVKLATNVERRLTMGKRGYERVKERFLEHHMSERIASVLKE 452

Query: 368 VLKKSKSHLY 377
           VLKK+++H +
Sbjct: 453 VLKKAENHAF 462

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458171|ref|XP_002281084.1| PREDICTED: uncharacterized protein LOC100257473 [Vitis vinifera]

 Score =  658 bits (1697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/370 (84%), Positives = 348/370 (94%)

Query: 8   RGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAV 67
           RGVG +V W+TIQKP++ DEVIYSLEH+M DRGV+V  AKGQE I+TALKADL+VLNTAV
Sbjct: 109 RGVGAEVVWLTIQKPTDSDEVIYSLEHRMLDRGVKVFPAKGQEAIDTALKADLVVLNTAV 168

Query: 68  AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNR 127
           AGKWLD+V+KE+VPR+LP VLWWIHEMRGHYFKL+YVKHLP VAGAMIDSH TAEYWKNR
Sbjct: 169 AGKWLDSVVKENVPRILPKVLWWIHEMRGHYFKLEYVKHLPYVAGAMIDSHTTAEYWKNR 228

Query: 128 TRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS 187
           TRERL IKMP+TYVVHLGNSKELME+AE+NVAKRVLREHVRESLGVRNEDLLFA+INSVS
Sbjct: 229 TRERLGIKMPETYVVHLGNSKELMEIAENNVAKRVLREHVRESLGVRNEDLLFAVINSVS 288

Query: 188 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 247
           RGKGQDLFL SFY+SL+LIK +KL+VPS+HAVI+GSDMNAQTKFE+ELRN+V++ KIQD+
Sbjct: 289 RGKGQDLFLRSFYQSLQLIKGRKLQVPSIHAVIVGSDMNAQTKFETELRNFVVENKIQDQ 348

Query: 248 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 307
           VHF+NKTLTVAPYLA+IDVLVQNSQA GECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG
Sbjct: 349 VHFINKTLTVAPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 408

Query: 308 TTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 367
           TTGLLH VGKEG+ PLA NIVKLAT+VERRLTMGKRGYERVKE F EHHM+ERIA VLKE
Sbjct: 409 TTGLLHNVGKEGVKPLANNIVKLATNVERRLTMGKRGYERVKERFLEHHMSERIASVLKE 468

Query: 368 VLKKSKSHLY 377
           VLKK+++H +
Sbjct: 469 VLKKAENHAF 478

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147771878|emb|CAN73426.1| hypothetical protein VITISV_033235 [Vitis vinifera]

 Score =  647 bits (1670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/362 (85%), Positives = 340/362 (93%)

Query: 8   RGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAV 67
           RGVG +V W+TIQKP++ DEVIYSLEH+M DRGV+V  AKGQE I+TALKADL+VLNTAV
Sbjct: 109 RGVGAEVVWLTIQKPTDSDEVIYSLEHRMLDRGVKVFPAKGQEAIDTALKADLVVLNTAV 168

Query: 68  AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNR 127
           AGKWLD+V+KE+VPR+LP VLWWIHEMRGHYFKL+YVKHLP VAGAMIDSH TAEYWKNR
Sbjct: 169 AGKWLDSVVKENVPRILPKVLWWIHEMRGHYFKLEYVKHLPYVAGAMIDSHTTAEYWKNR 228

Query: 128 TRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS 187
           TRERL IKMP+TYVVHLGNSKELME+AE+NVAKRVLREHVRESLGVRNEDLLFAIINSVS
Sbjct: 229 TRERLGIKMPETYVVHLGNSKELMEIAENNVAKRVLREHVRESLGVRNEDLLFAIINSVS 288

Query: 188 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 247
           RGKGQDLFL SFY+SL+LIK +KL+VPS+HAVI+GSDMNAQTKFE+ELRN+V++ KIQD+
Sbjct: 289 RGKGQDLFLRSFYQSLQLIKGRKLQVPSIHAVIVGSDMNAQTKFETELRNFVVENKIQDQ 348

Query: 248 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 307
           VHF+NKTLTVAPYLA+IDVLVQNSQA GECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG
Sbjct: 349 VHFINKTLTVAPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 408

Query: 308 TTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 367
           TTGLLH VGKEG+ PLA NIVKLAT+VERRLTMGKRGYERVKE F EHHM+ERIA VLKE
Sbjct: 409 TTGLLHNVGKEGVKPLANNIVKLATNVERRLTMGKRGYERVKERFLEHHMSERIASVLKE 468

Query: 368 VL 369
            L
Sbjct: 469 EL 470

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538754|ref|XP_002510442.1| glycosyltransferase, putative [Ricinus communis] gi|223551143|gb|EEF52629.1| glycosyltransferase, putative [Ricinus communis]

 Score =  645 bits (1665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/367 (85%), Positives = 340/367 (92%)

Query: 8   RGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAV 67
           RGVG +V WIT QKP+E DEVIYSLE+KM DRGVQV SAKGQ+ I+TALKADL+VLNTAV
Sbjct: 111 RGVGAEVVWITNQKPTETDEVIYSLENKMLDRGVQVFSAKGQKAIDTALKADLVVLNTAV 170

Query: 68  AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNR 127
           AGKWLDA LKE V +VLP VLWWIHEMRGHYFKL+YVKHLP VAGAMIDSH TAEYWKNR
Sbjct: 171 AGKWLDATLKESVQQVLPKVLWWIHEMRGHYFKLEYVKHLPFVAGAMIDSHTTAEYWKNR 230

Query: 128 TRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS 187
           TRERL IKMP+TYVVHLGNSK+LMEVAED+VAKRVL EHVRESLGVRN+DLLFAIINSVS
Sbjct: 231 TRERLGIKMPETYVVHLGNSKDLMEVAEDSVAKRVLCEHVRESLGVRNDDLLFAIINSVS 290

Query: 188 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 247
           RGKGQDLFL SFYESL+LI+EKKL+VPS+HAV++GSDMNAQTKFE ELR +V +KKIQDR
Sbjct: 291 RGKGQDLFLRSFYESLQLIQEKKLKVPSLHAVVVGSDMNAQTKFEMELRKFVQEKKIQDR 350

Query: 248 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 307
           VHFVNKTLTVAPYLA+IDVLVQNSQA GECFGRITIEAMAFQLPVLGTAAGGT EIVVNG
Sbjct: 351 VHFVNKTLTVAPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNG 410

Query: 308 TTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 367
           TTGLLHP GKEG+TPLA NIVKLATHVERRLTMGK GY+RVKE F EHHM+ RIA+VLKE
Sbjct: 411 TTGLLHPAGKEGVTPLANNIVKLATHVERRLTMGKNGYKRVKERFLEHHMSHRIALVLKE 470

Query: 368 VLKKSKS 374
           VL+K+K+
Sbjct: 471 VLRKAKT 477

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518559|ref|XP_003527946.1| PREDICTED: uncharacterized protein LOC100791337 [Glycine max]

 Score =  642 bits (1657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/366 (83%), Positives = 341/366 (93%)

Query: 8   RGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAV 67
           RGVG+ V WI+ QKPSE D V+YSLE KM DRGVQV+SAKG+  I+TALKAD+++LNTAV
Sbjct: 98  RGVGSDVVWISNQKPSEHDRVVYSLESKMLDRGVQVLSAKGENAIDTALKADMVILNTAV 157

Query: 68  AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNR 127
           AGKWLDA+LKE V  VLP VLWWIHEMRGHYFK++YVKHLP VAGAMIDSH TAEYWKNR
Sbjct: 158 AGKWLDAILKEKVAHVLPKVLWWIHEMRGHYFKVEYVKHLPFVAGAMIDSHTTAEYWKNR 217

Query: 128 TRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS 187
           TRERL I+MP+TYVVHLGNSKELMEVAED+VAKRVLREHVRESLGVRN+DLLFAIINSVS
Sbjct: 218 TRERLGIEMPETYVVHLGNSKELMEVAEDSVAKRVLREHVRESLGVRNDDLLFAIINSVS 277

Query: 188 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 247
           RGKGQDLFL SFYESL+LI+EKKL++P +HAVI+GSDMNAQTKFE ELR +V++KKIQ+R
Sbjct: 278 RGKGQDLFLRSFYESLQLIQEKKLQLPFLHAVIVGSDMNAQTKFEMELRKFVVEKKIQNR 337

Query: 248 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 307
           VHFVNKTL VAPYLAAIDVLVQNSQA GECFGRITIEAMAF+LPVLGTAAGGT EIVVNG
Sbjct: 338 VHFVNKTLAVAPYLAAIDVLVQNSQARGECFGRITIEAMAFRLPVLGTAAGGTMEIVVNG 397

Query: 308 TTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 367
           TTGLLHPVGKEG+TPLAKNIVKLA+HVE+RLTMGK+GYERVKE F EHHM++RIA+VLKE
Sbjct: 398 TTGLLHPVGKEGVTPLAKNIVKLASHVEKRLTMGKKGYERVKERFLEHHMSQRIALVLKE 457

Query: 368 VLKKSK 373
           VL+K+K
Sbjct: 458 VLQKAK 463

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436130|ref|XP_004135847.1| PREDICTED: uncharacterized protein LOC101206589 [Cucumis sativus]

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 298/368 (80%), Positives = 339/368 (92%)

Query: 8   RGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAV 67
           RGVGT+V WIT QKP E DEV+YSLE KM DRGVQV+SAK QE + TALKA L+VLNTAV
Sbjct: 104 RGVGTQVVWITNQKPPEPDEVVYSLERKMLDRGVQVLSAKEQEAVETALKAHLVVLNTAV 163

Query: 68  AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNR 127
           AGKWLDAVLKE+VPRVLP VLWWIHEMRG+YFK++YVKHLP VAGAMIDSH TAEYWKNR
Sbjct: 164 AGKWLDAVLKENVPRVLPKVLWWIHEMRGNYFKVEYVKHLPFVAGAMIDSHTTAEYWKNR 223

Query: 128 TRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS 187
           T +RL I+MP+TYVVHLGNSK+LMEVAE+NVAKRVLREH+RESLGVRNED+LFAIINSVS
Sbjct: 224 TWDRLGIQMPETYVVHLGNSKDLMEVAENNVAKRVLREHIRESLGVRNEDILFAIINSVS 283

Query: 188 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 247
           RGKGQDLFL +F++SL++I++KKL VP +HAV++GSDMNA TKFE+ELRN+V + KIQDR
Sbjct: 284 RGKGQDLFLRAFHQSLQMIQDKKLRVPRIHAVVVGSDMNAHTKFETELRNFVNENKIQDR 343

Query: 248 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 307
           VHFVNKTL+VAPYLA+IDVLVQNSQ  GECFGRITIEAMAFQLPVLGTAAGGT EIVVNG
Sbjct: 344 VHFVNKTLSVAPYLASIDVLVQNSQGRGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNG 403

Query: 308 TTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 367
           TTGLLHP GKEG+TPLA NIVKLATHVERRLTMGK+GYERV+++F E HM +RIAVVLK+
Sbjct: 404 TTGLLHPAGKEGVTPLAHNIVKLATHVERRLTMGKKGYERVRQMFLEQHMMQRIAVVLKK 463

Query: 368 VLKKSKSH 375
           V++K+KSH
Sbjct: 464 VMEKAKSH 471

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564312|ref|XP_003550399.1| PREDICTED: proteasome-activating nucleotidase-like [Glycine max]

 Score =  626 bits (1614), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 297/363 (81%), Positives = 333/363 (91%)

Query: 8   RGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAV 67
           R  G+ V WIT QKP + D+VIY+LE+KM DRGVQV+ A+G++ ++TA  ADL++LNTAV
Sbjct: 96  RSAGSDVVWITNQKPPKPDDVIYTLENKMLDRGVQVVDARGEKAVDTARNADLVILNTAV 155

Query: 68  AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNR 127
           AGKWLDAVLKE V  VLP VLWWIHEMRGHYFK++YVKHLP VAGAMIDSH TAEYWKNR
Sbjct: 156 AGKWLDAVLKEKVLEVLPKVLWWIHEMRGHYFKVEYVKHLPFVAGAMIDSHTTAEYWKNR 215

Query: 128 TRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS 187
           TRERL IKMP+TYVVHLGNSKELMEVAED+VAKRVLREHVR+SLGVRN+DLLFAIINSVS
Sbjct: 216 TRERLGIKMPETYVVHLGNSKELMEVAEDSVAKRVLREHVRQSLGVRNDDLLFAIINSVS 275

Query: 188 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 247
           RGKGQDLFL SFYESL LI+EKKL+VPS+HA+++GSDMNAQTKFE+ELR +VM+KKIQDR
Sbjct: 276 RGKGQDLFLRSFYESLMLIQEKKLQVPSLHAIVVGSDMNAQTKFETELRQFVMEKKIQDR 335

Query: 248 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 307
           VHFVNKTL VAPYLA+IDVLVQNSQA GECFGRITIEAMAF+LPVLGTAAGGT EIVVN 
Sbjct: 336 VHFVNKTLAVAPYLASIDVLVQNSQARGECFGRITIEAMAFRLPVLGTAAGGTVEIVVNR 395

Query: 308 TTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 367
           TTGLLHPVGKEG+TPLAKNIV LATHVERRLTMGK+GYERVKE F E HMA+RIA+VLKE
Sbjct: 396 TTGLLHPVGKEGVTPLAKNIVNLATHVERRLTMGKKGYERVKERFLEPHMAQRIALVLKE 455

Query: 368 VLK 370
           +L+
Sbjct: 456 LLQ 458

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255648383|gb|ACU24642.1| unknown [Glycine max]

 Score =  622 bits (1605), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 298/364 (81%), Positives = 333/364 (91%)

Query: 8   RGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAV 67
           R  G+ V  IT QKP + D+VIY+LE+KM DRGVQV+ A+G++ ++TA  ADL++LNTAV
Sbjct: 96  RSAGSDVVRITNQKPPKPDDVIYTLENKMLDRGVQVVDARGEKAVDTARNADLVILNTAV 155

Query: 68  AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNR 127
           AGKWLDAVLKE V  VLP VLWWIHEMRGHYFK++YVKHLP VAGAMIDSH TAEYWKNR
Sbjct: 156 AGKWLDAVLKEKVLEVLPKVLWWIHEMRGHYFKVEYVKHLPFVAGAMIDSHTTAEYWKNR 215

Query: 128 TRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS 187
           TRERL IKMP+TYVVHLGNSKELMEVAED+VAKRVLREHVR+SLGVRN+DLLFAIINSVS
Sbjct: 216 TRERLGIKMPETYVVHLGNSKELMEVAEDSVAKRVLREHVRQSLGVRNDDLLFAIINSVS 275

Query: 188 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 247
           RGKGQDLFL SFYESL LI+EKKL+VPS+HA+++GSDMNAQTKFE+ELR +VM+KKIQDR
Sbjct: 276 RGKGQDLFLRSFYESLMLIQEKKLQVPSLHAIVVGSDMNAQTKFETELRQFVMEKKIQDR 335

Query: 248 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 307
           VHFVNKTL VAPYLA+IDVLVQNSQA GECFGRITIEAMAF+LPVLGTAAGGT EIVVN 
Sbjct: 336 VHFVNKTLAVAPYLASIDVLVQNSQARGECFGRITIEAMAFRLPVLGTAAGGTVEIVVNR 395

Query: 308 TTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 367
           TTGLLHPVGKEG+TPLAKNIV LATHVERRLTMGK+GYERVKE F E HMA+RIA+VLKE
Sbjct: 396 TTGLLHPVGKEGVTPLAKNIVNLATHVERRLTMGKKGYERVKERFLEPHMAQRIALVLKE 455

Query: 368 VLKK 371
           VL+K
Sbjct: 456 VLRK 459

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431277|ref|XP_002268739.1| PREDICTED: uncharacterized protein LOC100243789 [Vitis vinifera]

 Score =  619 bits (1597), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 298/368 (80%), Positives = 332/368 (90%)

Query: 8   RGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAV 67
           R VG +V WIT  KPSE DEVIYSLE+KM  RGVQV+ AKG+E IN ALKADL+VLNT +
Sbjct: 96  RSVGAEVCWITNHKPSETDEVIYSLENKMQHRGVQVLPAKGREAINRALKADLLVLNTVM 155

Query: 68  AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNR 127
           AGKWLD VLKE+VP VLP VLWWIHE++GHYF+L+YV+HLPLVA AMIDSHV AEYWK  
Sbjct: 156 AGKWLDDVLKENVPHVLPKVLWWIHEIQGHYFQLEYVRHLPLVAAAMIDSHVAAEYWKTG 215

Query: 128 TRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS 187
           TR+ LRIKMPDTYVVHLGNSK+LM++AED+VAKRVLREHVRESLGVR+ED+LFA+INSVS
Sbjct: 216 TRDYLRIKMPDTYVVHLGNSKDLMDIAEDSVAKRVLREHVRESLGVRDEDVLFAMINSVS 275

Query: 188 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 247
           RGKGQDLFL SFYESL+LI +KKL VPS+HAVI+GSDM AQ KFES+LR++V  KKIQDR
Sbjct: 276 RGKGQDLFLQSFYESLQLIIQKKLRVPSMHAVIVGSDMTAQPKFESQLRDFVRVKKIQDR 335

Query: 248 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 307
           VHFVNKTLTVAPYLAAIDVLVQNSQA GECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG
Sbjct: 336 VHFVNKTLTVAPYLAAIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 395

Query: 308 TTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 367
           +TGLLHP GKEG+TPLAKNIV LAT+V RRLT+GK GYE+VKE F EHHMA RIA VLKE
Sbjct: 396 STGLLHPTGKEGVTPLAKNIVTLATNVHRRLTLGKTGYEKVKETFLEHHMAHRIATVLKE 455

Query: 368 VLKKSKSH 375
           VL+K+KSH
Sbjct: 456 VLQKAKSH 463

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	377
TAIR|locus:2018392	463	AT1G75420 [Arabidopsis thalian	0.960	0.781	0.798	1.5e-152
TAIR|locus:2013089	479	AT1G19710 [Arabidopsis thalian	0.960	0.755	0.779	2.4e-147
TAIR|locus:2093925	697	AT3G15940 [Arabidopsis thalian	0.368	0.199	0.432	1.6e-38
TAIR|locus:2018144	670	AT1G52420 [Arabidopsis thalian	0.368	0.207	0.390	3.1e-34
TIGR_CMR|BA_1558	381	BA_1558 "glycosyl transferase,	0.299	0.296	0.358	7.2e-09
TIGR_CMR|CHY_1134	378	CHY_1134 "glycosyl transferase	0.302	0.301	0.347	2.6e-08
TIGR_CMR|CPS_4999	367	CPS_4999 "glycosyl transferase	0.474	0.487	0.279	5.4e-08
UNIPROTKB|Q47WI9	364	CPS_4182 "Putative lipopolysac	0.442	0.458	0.271	3.3e-07
TIGR_CMR|CPS_4182	364	CPS_4182 "putative lipopolysac	0.442	0.458	0.271	3.3e-07
TIGR_CMR|CHY_1814	369	CHY_1814 "glycosyltransferase,	0.363	0.371	0.303	1.2e-06

TAIR|locus:2018392 AT1G75420 [Arabidopsis thaliana (taxid:3702)]

 Score = 1488 (528.9 bits), Expect = 1.5e-152, P = 1.5e-152
 Identities = 289/362 (79%), Positives = 318/362 (87%)

Query:     1 MELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 60
             MELAFLLRGVG  V WIT QKP E+DEV+YSLEHKM DRGVQVISAKGQ+ ++T+LKADL
Sbjct:    86 MELAFLLRGVGADVVWITNQKPLEDDEVVYSLEHKMLDRGVQVISAKGQKAVDTSLKADL 145

Query:    61 IVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVT 120
             IVLNTAVAGKWLDAVLKE+V +VLP +LWWIHEMRGHYF  D VKHLP VAGAMIDSH T
Sbjct:   146 IVLNTAVAGKWLDAVLKENVVKVLPKILWWIHEMRGHYFNADLVKHLPFVAGAMIDSHAT 205

Query:   121 AEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLF 180
             A YWKNRT+ RL IKMP TYVVHLGNSKELMEVAED+VAKRVLREHVRESLGVRNEDLLF
Sbjct:   206 AGYWKNRTQARLGIKMPKTYVVHLGNSKELMEVAEDSVAKRVLREHVRESLGVRNEDLLF 265

Query:   181 AIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVIIGSDMNAQTKFESELRNYVM 240
              IINSVSRGKGQDLFL +F+ES          VP++HAV++GSDM+ QTKFE+ELRN+V 
Sbjct:   266 GIINSVSRGKGQDLFLRAFHESLERIKEKKLQVPTMHAVVVGSDMSKQTKFETELRNFVR 325

Query:   241 QKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGT 300
             +KK+++ VHFVNKTLTVAPY+AAIDVLVQNSQA GECFGRITIEAMAF+LPVLGTAAGGT
Sbjct:   326 EKKLENFVHFVNKTLTVAPYIAAIDVLVQNSQARGECFGRITIEAMAFKLPVLGTAAGGT 385

Query:   301 TEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAER 360
              EIVVNGTTGLLH  GKEG+ PLAKNIVKLAT VE RL MGK GYERVKE+F EHHM+ R
Sbjct:   386 MEIVVNGTTGLLHSAGKEGVIPLAKNIVKLATQVELRLRMGKNGYERVKEMFLEHHMSHR 445

Query:   361 IA 362
             IA
Sbjct:   446 IA 447

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0001666 "response to hypoxia" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2013089 AT1G19710 [Arabidopsis thaliana (taxid:3702)]

 Score = 1439 (511.6 bits), Expect = 2.4e-147, P = 2.4e-147
 Identities = 283/363 (77%), Positives = 315/363 (86%)

Query:     1 MELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 60
             MELAFLLRGV ++V WIT QKP EEDEVI  LEHKM DRGVQVISAK Q+ I+TALK+DL
Sbjct:    96 MELAFLLRGVESEVVWITNQKPVEEDEVIKVLEHKMLDRGVQVISAKSQKAIDTALKSDL 155

Query:    61 IVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVT 120
             +VLNTAVAGKWLDAVLK++VP+VLP VLWWIHEMRGHYFK D VKHLP VAGAMIDSH T
Sbjct:   156 VVLNTAVAGKWLDAVLKDNVPKVLPKVLWWIHEMRGHYFKPDLVKHLPFVAGAMIDSHAT 215

Query:   121 AEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLF 180
             AEYWKNRT +RL IKMP TYVVHLGNSKELMEVAED+ AK VLRE VRESLGVRNED+LF
Sbjct:   216 AEYWKNRTHDRLGIKMPKTYVVHLGNSKELMEVAEDSFAKNVLREQVRESLGVRNEDILF 275

Query:   181 AIINSVSRGKGQDLFLHSFYESXXXXXXXXXX-VPSVHAVIIGSDMNAQTKFESELRNYV 239
              IINSVSRGKGQDLFL +F+ES           VP++HAV++GSDM+AQTKFE+ELRN+V
Sbjct:   276 GIINSVSRGKGQDLFLRAFHESLKVIKETKKLEVPTMHAVVVGSDMSAQTKFETELRNFV 335

Query:   240 MQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG 299
              + K+Q  VHFVNKT+ VAPYLAAIDVLVQNSQA GECFGRITIEAMAF+LPVLGTAAGG
Sbjct:   336 QEMKLQKIVHFVNKTMKVAPYLAAIDVLVQNSQARGECFGRITIEAMAFKLPVLGTAAGG 395

Query:   300 TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAE 359
             T EIVVN TTGLLH  GK+G+ PLAKNIVKLAT+V+ R TMGK+GYERVKE+F EHHM+ 
Sbjct:   396 TMEIVVNRTTGLLHNTGKDGVLPLAKNIVKLATNVKMRNTMGKKGYERVKEMFLEHHMSH 455

Query:   360 RIA 362
             RIA
Sbjct:   456 RIA 458

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0001666 "response to hypoxia" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2093925 AT3G15940 [Arabidopsis thaliana (taxid:3702)]

 Score = 275 (101.9 bits), Expect = 1.6e-38, Sum P(2) = 1.6e-38
 Identities = 61/141 (43%), Positives = 88/141 (62%)

Query:   221 IGSDMNAQTKFESELRNYVMQK-KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFG 279
             +GS  N +  +  E+ +++     + + V +   T  VA   +A DV V NSQ  GE FG
Sbjct:   547 VGSKSN-KVAYVKEMLSFLSNNGNLSNSVLWTPATTRVASLYSAADVYVTNSQGVGETFG 605

Query:   280 RITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLT 339
             R+TIEAMA+ LPVLGT AGGT EIV +  TGLLHPVG+ G   LA+N++ L  +   RL 
Sbjct:   606 RVTIEAMAYGLPVLGTDAGGTKEIVEHNVTGLLHPVGRAGNKVLAQNLLFLLRNPSTRLQ 665

Query:   340 MGKRGYERVKEIFQEHHMAER 360
             +G +G E V++++ + HM +R
Sbjct:   666 LGSQGREIVEKMYMKQHMYKR 686

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0001666 "response to hypoxia" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

TAIR|locus:2018144 AT1G52420 [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 3.1e-34, Sum P(2) = 3.1e-34
 Identities = 55/141 (39%), Positives = 84/141 (59%)

Query:   221 IGSDMNAQTKFESELRNYVMQK-KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFG 279
             +GS  N +  +  E+ +++     +   V +   T  VA   +A DV V NSQ  GE FG
Sbjct:   520 VGSKSN-KVGYVKEMLSFLSNSGNLSKSVMWTPATTRVASLYSAADVYVTNSQGVGETFG 578

Query:   280 RITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLT 339
             R+TIEAMA+ L V+GT AGGT E+V +  TGLLH +G+ G   LA N++ L  + + RL 
Sbjct:   579 RVTIEAMAYGLAVVGTDAGGTKEMVQHNMTGLLHSMGRSGNKELAHNLLYLLRNPDERLR 638

Query:   340 MGKRGYERVKEIFQEHHMAER 360
             +G  G + V++++ + HM +R
Sbjct:   639 LGSEGRKMVEKMYMKQHMYKR 659

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0001666 "response to hypoxia" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

TIGR_CMR|BA_1558 BA_1558 "glycosyl transferase, group 1 family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 159 (61.0 bits), Expect = 7.2e-09, P = 7.2e-09
 Identities = 42/117 (35%), Positives = 62/117 (52%)

Query:   244 IQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEI 303
             I+DRV F+ K   VA  LA  D+++  S+   E FG + +EAMA  +P +GT  GG  E+
Sbjct:   252 IEDRVLFLGKQDNVAELLAMSDLMLLLSEK--ESFGLVLLEAMACGVPCIGTRVGGIPEV 309

Query:   304 VVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAER 360
             + +G TG L  VG    T +A   ++L    E    MG+R  E V E F+   +  +
Sbjct:   310 IQHGDTGYLCEVGDT--TGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQ 364

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TIGR_CMR|CHY_1134 CHY_1134 "glycosyl transferase, group 1 family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 154 (59.3 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 41/118 (34%), Positives = 63/118 (53%)

Query:   237 NYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA 296
             N V +K + ++V F+ K   V+  L+  DVL+  S+   E FG + +EAMA ++PV+   
Sbjct:   247 NEVQKKNLTNKVKFLGKMPKVSDVLSISDVLLITSET--ESFGLVALEAMAMEVPVVAYR 304

Query:   297 AGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQE 354
              GG  E+VV+G TG L  V    +   A+ +VKL      +   G+ G  R KE F +
Sbjct:   305 VGGLPEVVVDGQTGYL--VDYLDLEKAAEAVVKLLKEPWLKRDFGRWGRIRAKERFSK 360

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TIGR_CMR|CPS_4999 CPS_4999 "glycosyl transferase, group 1 family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 151 (58.2 bits), Expect = 5.4e-08, P = 5.4e-08
 Identities = 54/193 (27%), Positives = 84/193 (43%)

Query:   168 RESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVIIGSDMNA 227
             R  LG+  + L+   I  +   KG     H   ++          +P++H  I G D  A
Sbjct:   179 RADLGIPLDQLMLLSIGHLGEIKG-----HQ--DTLVALSKFTKTMPALHLYIAG-DGAA 230

Query:   228 QTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMA 287
             Q K   +L   V + +I + V F+ +      +L A D+ +Q S    E FG + +EA A
Sbjct:   231 QEK--QKLTELVNKLQINENVTFLGQINNAFSWLEACDIFIQPSVE--EAFGLVFVEAGA 286

Query:   288 FQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYER 347
                PV+ T  GG  EI+V+  TGLL  V       +   +  L      R   G+ GY+R
Sbjct:   287 KAKPVIATTVGGIKEIIVSKETGLL--VLPSSPKAVEHALAILINSPPLRQQYGENGYKR 344

Query:   348 VKEIFQEHHMAER 360
             + E F   +M  +
Sbjct:   345 ITEHFSLTNMVNK 357

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

UNIPROTKB|Q47WI9 CPS_4182 "Putative lipopolysaccharide core biosynthesis mannosyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 144 (55.7 bits), Expect = 3.3e-07, P = 3.3e-07
 Identities = 50/184 (27%), Positives = 86/184 (46%)

Query:   181 AIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVIIGSDMNAQTKFESELRNYVM 240
             AI+  V + KG  LF+ S  +            P   AVI+GS  ++   F +EL++ + 
Sbjct:   185 AILGRVRKQKGVHLFVESCIDILKDR-------PDYTAVIVGSISSSNESFVNELQSKID 237

Query:   241 QKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG 298
             Q  + +R+ F  +     +    +++ ++V  S+   E FG   +EAM+    VL + AG
Sbjct:   238 QAGLTERIVFAGEQNFADIPKIFSSLSLVVALSE--NEGFGLTILEAMSSGAAVLASEAG 295

Query:   299 GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMA 358
                E+V  G  G + P+    +  + + +  L    E+ + MG+ G ERV E    H+  
Sbjct:   296 AWPEVVRQGVDGYVVPIND--LDAVTEKMSLLLADEEKLMQMGRDGRERVLE----HYSV 349

Query:   359 ERIA 362
             ER A
Sbjct:   350 EREA 353

GO:0000030 "mannosyltransferase activity" evidence=ISS

GO:0009244 "lipopolysaccharide core region biosynthetic process" evidence=ISS

TIGR_CMR|CPS_4182 CPS_4182 "putative lipopolysaccharide core biosynthesis mannosyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 144 (55.7 bits), Expect = 3.3e-07, P = 3.3e-07
 Identities = 50/184 (27%), Positives = 86/184 (46%)

Query:   181 AIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVIIGSDMNAQTKFESELRNYVM 240
             AI+  V + KG  LF+ S  +            P   AVI+GS  ++   F +EL++ + 
Sbjct:   185 AILGRVRKQKGVHLFVESCIDILKDR-------PDYTAVIVGSISSSNESFVNELQSKID 237

Query:   241 QKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG 298
             Q  + +R+ F  +     +    +++ ++V  S+   E FG   +EAM+    VL + AG
Sbjct:   238 QAGLTERIVFAGEQNFADIPKIFSSLSLVVALSE--NEGFGLTILEAMSSGAAVLASEAG 295

Query:   299 GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMA 358
                E+V  G  G + P+    +  + + +  L    E+ + MG+ G ERV E    H+  
Sbjct:   296 AWPEVVRQGVDGYVVPIND--LDAVTEKMSLLLADEEKLMQMGRDGRERVLE----HYSV 349

Query:   359 ERIA 362
             ER A
Sbjct:   350 EREA 353

GO:0000030 "mannosyltransferase activity" evidence=ISS

GO:0009244 "lipopolysaccharide core region biosynthetic process" evidence=ISS

TIGR_CMR|CHY_1814 CHY_1814 "glycosyltransferase, group 1 family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 44/145 (30%), Positives = 71/145 (48%)

Query:   216 VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWG 275
             V   IIG D       ++EL+    +  I+  V F       A +   ID+ V  S + G
Sbjct:   223 VFRAIIGGD----GPLKNELKELAKELGIESLVTFPGYIPNPAEFYREIDIFVLPSISEG 278

Query:   276 ECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVE 335
                    +EAM+++L V+ T  GG  E++ +G  GLL P  K+  T L + +  L  +  
Sbjct:   279 LPLS--LLEAMSWKLAVIATNVGGIPEVINSGENGLLVPP-KDA-TALTEALYTLIFNEN 334

Query:   336 RRLTMGKRGYERVKEIFQEHHMAER 360
              RL++G+R Y  ++E +   HMA+R
Sbjct:   335 FRLSLGERAYITIREKYNVAHMAQR 359

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	377
cd03801	374	cd03801, GT1_YqgM_like, This family is most closel	1e-30
cd03808	359	cd03808, GT1_cap1E_like, This family is most close	2e-23
cd03819	355	cd03819, GT1_WavL_like, This family is most closel	3e-19
cd03798	377	cd03798, GT1_wlbH_like, This family is most closel	5e-19
COG0438	381	COG0438, RfaG, Glycosyltransferase [Cell envelope	8e-17
cd03811	353	cd03811, GT1_WabH_like, This family is most closel	1e-16
cd03795	357	cd03795, GT1_like_4, This family is most closely r	7e-16
cd03807	365	cd03807, GT1_WbnK_like, This family is most closel	1e-15
cd04962	371	cd04962, GT1_like_5, This family is most closely r	1e-15
TIGR03999	374	TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin	2e-15
pfam00534	158	pfam00534, Glycos_transf_1, Glycosyl transferases	5e-15
cd03800	398	cd03800, GT1_Sucrose_synthase, This family is most	3e-14
cd03820	348	cd03820, GT1_amsD_like, This family is most closel	3e-14
cd03822	366	cd03822, GT1_ecORF704_like, This family is most cl	2e-13
cd03823	359	cd03823, GT1_ExpE7_like, This family is most close	2e-12
cd03794	394	cd03794, GT1_wbuB_like, This family is most closel	4e-12
cd03799	355	cd03799, GT1_amsK_like, This is a family of GT1 gl	5e-12
cd03817	374	cd03817, GT1_UGDG_like, This family is most closel	9e-12
cd05844	367	cd05844, GT1_like_7, Glycosyltransferases catalyze	3e-11
cd04951	360	cd04951, GT1_WbdM_like, This family is most closel	5e-11
cd03825	365	cd03825, GT1_wcfI_like, This family is most closel	6e-11
cd03805	392	cd03805, GT1_ALG2_like, This family is most closel	9e-11
cd03814	364	cd03814, GT1_like_2, This family is most closely r	2e-10
TIGR02149	388	TIGR02149, glgA_Coryne, glycogen synthase, Coryneb	4e-10
TIGR03088	374	TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH	5e-10
cd01635	229	cd01635, Glycosyltransferase_GTB_type, Glycosyltra	9e-10
cd03813	475	cd03813, GT1_like_3, This family is most closely r	5e-08
PRK15484	380	PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety	7e-08
TIGR04157	406	TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG	1e-07
TIGR03449	405	TIGR03449, mycothiol_MshA, D-inositol-3-phosphate	7e-07
cd03792	372	cd03792, GT1_Trehalose_phosphorylase, Trehalose ph	4e-06
cd03821	375	cd03821, GT1_Bme6_like, This family is most closel	4e-06
PLN02871	465	PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu	1e-05
cd03802	335	cd03802, GT1_AviGT4_like, This family is most clos	1e-04
cd04946	407	cd04946, GT1_AmsK_like, This family is most closel	3e-04
TIGR02470	784	TIGR02470, sucr_synth, sucrose synthase	7e-04
PRK15490	578	PRK15490, PRK15490, Vi polysaccharide biosynthesis	0.001
pfam13524	92	pfam13524, Glyco_trans_1_2, Glycosyl transferases	0.001
cd03804	351	cd03804, GT1_wbaZ_like, This family is most closel	0.001
cd03809	365	cd03809, GT1_mtfB_like, This family is most closel	0.003
TIGR04063	397	TIGR04063, stp3, PEP-CTERM/exosortase A-associated	0.004
pfam13692	134	pfam13692, Glyco_trans_1_4, Glycosyl transferases	0.004
PLN00142	815	PLN00142, PLN00142, sucrose synthase	0.004

>gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

 Score =  119 bits (301), Expect = 1e-30
 Identities = 92/378 (24%), Positives = 144/378 (38%), Gaps = 38/378 (10%)

Query: 2   ELAFLLRGVGTKVNWITIQKPSEEDE--------VIYSLEHKMWDRGVQVISAKGQETIN 53
           ELA  L   G +V  +T       DE        V      ++    + ++ A     + 
Sbjct: 22  ELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRPPPLLRVRRLLLLLLLALRLRRLL 81

Query: 54  TALKADLIVLNTAVAGKWLDAVLKE-DVPRVL-PNVLWWIHEMRGHYFKLDYVKHLPLVA 111
              + D++  +  +A        +   +P VL  + L +          L   + L   A
Sbjct: 82  RRERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRA 141

Query: 112 GAMIDSHVT-AEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRES 170
               D  +  +E  +   RE   +      V+  G     ++      A R      R  
Sbjct: 142 LRRADRIIAVSEATREELRELGGVPPEKITVIPNG-----VDTERFRPAPR----AARRR 192

Query: 171 LGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK 230
           LG+  ++ +   +  +   KG DL L    E+L  +++   E P V  VI+G        
Sbjct: 193 LGIPEDEPVILFVGRLVPRKGVDLLL----EALAKLRK---EYPDVRLVIVGDG-----P 240

Query: 231 FESELRNYVMQKKIQDRVHFVNKTL--TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAF 288
              EL     +  + DRV F+       +    AA DV V  S    E FG + +EAMA 
Sbjct: 241 LREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLY--EGFGLVLLEAMAA 298

Query: 289 QLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERV 348
            LPV+ +  GG  E+V +G TGLL P G      LA+ I++L    E R  +G+   ERV
Sbjct: 299 GLPVVASDVGGIPEVVEDGETGLLVPPGDP--EALAEAILRLLDDPELRRRLGEAARERV 356

Query: 349 KEIFQEHHMAERIAVVLK 366
            E F    +A R   V  
Sbjct: 357 AERFSWDRVAARTEEVYY 374

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374

>gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =   99 bits (250), Expect = 2e-23
 Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 17/173 (9%)

Query: 190 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS-DMNAQTKFESELRNYVMQKKIQDRV 248
           KG D  L    E+  ++K K    P+V  +++G  D         E+        ++ RV
Sbjct: 201 KGIDELL----EAARILKAKG---PNVRLLLVGDGDEENPAA-ILEIEKLG----LEGRV 248

Query: 249 HFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGT 308
            F+     V   LAA DV V  S  + E   R+ +EAMA   PV+ T   G  E V++G 
Sbjct: 249 EFLGFRDDVPELLAAADVFVLPS--YREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGV 306

Query: 309 TGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERI 361
            G L P G      LA  I +L    E R  MG+   +R +E F E  + +++
Sbjct: 307 NGFLVPPGDA--EALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKL 357

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359

>gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 87.3 bits (217), Expect = 3e-19
 Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 12/194 (6%)

Query: 159 AKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHA 218
            +R+L         +     +  +   ++R KGQ++F+    E+L  +K+   + P VH 
Sbjct: 169 PERILAL--AREWPLPKGKPVILLPGRLTRWKGQEVFI----EALARLKK---DDPDVHL 219

Query: 219 VIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECF 278
           +I+G     +  + +EL   + +  +QDRV FV     +    A  D++V  S    E F
Sbjct: 220 LIVGDA-QGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVSASTE-PEAF 277

Query: 279 GRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRL 338
           GR  +EA A   PV+ +  GG  E V  G TGLL P G       A + +      E R 
Sbjct: 278 GRTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLL-PEGRA 336

Query: 339 TMGKRGYERVKEIF 352
            M  +    V+ +F
Sbjct: 337 KMFAKARMCVETLF 350

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355

>gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 87.0 bits (216), Expect = 5e-19
 Identities = 61/183 (33%), Positives = 88/183 (48%), Gaps = 24/183 (13%)

Query: 190 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 249
           KG D  +    E+L  + +K+   P VH VI+G            L     +  ++DRV 
Sbjct: 215 KGIDYLI----EALARLLKKR---PDVHLVIVGDG-----PLREALEALAAELGLEDRVT 262

Query: 250 FV----NKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVV 305
           F+    ++   V  Y AA DV V  S    E FG + +EAMA  LPV+ T  GG  EI+ 
Sbjct: 263 FLGAVPHEE--VPAYYAAADVFVLPS--LREGFGLVLLEAMACGLPVVATDVGGIPEIIT 318

Query: 306 NGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL 365
           +G  GLL P G      LA+ I++L      R  +G+    RV E F   ++AER+  + 
Sbjct: 319 DGENGLLVPPG--DPEALAEAILRLLADPWLR--LGRAARRRVAERFSWENVAERLLELY 374

Query: 366 KEV 368
           +EV
Sbjct: 375 REV 377

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377

>gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane]

 Score = 80.8 bits (198), Expect = 8e-17
 Identities = 67/291 (23%), Positives = 109/291 (37%), Gaps = 31/291 (10%)

Query: 84  LPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVH 143
           +P +L     +         +K L      + D  +          E L +      V+ 
Sbjct: 120 IPRILLLPRLLLLLGLLRLLLKRLKKALRLLADRVIAVSPALKELLEALGVP-NKIVVIP 178

Query: 144 LGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESL 203
            G   E    A   +                    +   +  +   KG DL +       
Sbjct: 179 NGIDTEKFAPARIGLLPE-------------GGKFVVLYVGRLDPEKGLDLLI------- 218

Query: 204 ELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN--KTLTVAPYL 261
           E   + K   P +  VI+G       +   EL     +  ++D V F+       +A  L
Sbjct: 219 EAAAKLKKRGPDIKLVIVGD----GPERREELEKLAKKLGLEDNVKFLGYVPDEELAELL 274

Query: 262 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGIT 321
           A+ DV V  S    E FG + +EAMA   PV+ +  GG  E+V +G TGLL  V    + 
Sbjct: 275 ASADVFVLPSL--SEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLL--VPPGDVE 330

Query: 322 PLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKS 372
            LA  + +L    E R  +G+   ERV+E F    +AE++  + +E+L + 
Sbjct: 331 ELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELLAEK 381

Length = 381

>gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 80.1 bits (198), Expect = 1e-16
 Identities = 51/169 (30%), Positives = 71/169 (42%), Gaps = 15/169 (8%)

Query: 187 SRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQD 246
           S  KG D  + +F          + E P    VI+G           EL     +  + D
Sbjct: 199 SPQKGFDTLIRAFALL-------RKEGPDARLVILGDG-----PLREELEALAKELGLAD 246

Query: 247 RVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN 306
           RVHF+       PYL A D+ V +S+   E F  + +EAMA   PV+ T   G  EI+ +
Sbjct: 247 RVHFLGFQSNPYPYLKAADLFVLSSRY--EGFPNVLLEAMALGTPVVATDCPGPREILED 304

Query: 307 GTTGLLHPVGKEGI-TPLAKNIVKLATHVERRLTMGKRGYERVKEIFQE 354
           G  GLL PVG E      A  ++ L    E R  +     ERV   + +
Sbjct: 305 GENGLLVPVGDEAALAAAALALLDLLLDPELRERLAAAARERVAREYSK 353

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353

>gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 77.6 bits (192), Expect = 7e-16
 Identities = 49/151 (32%), Positives = 69/151 (45%), Gaps = 12/151 (7%)

Query: 212 EVPSVHAVIIGS-DMNAQTKFESELRNYVMQKKIQDRVHFVNKTL--TVAPYLAAIDVLV 268
            +P    VI+G   +      E+EL        + DRV F+ +      A  LAA DV V
Sbjct: 215 ALPDAPLVIVGEGPL------EAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFV 268

Query: 269 QNSQAWGECFGRITIEAMAFQLPVLGTA-AGGTTEIVVNGTTGLLHPVGKEGITPLAKNI 327
             S    E FG + +EAMAF  PV+ T    G + + ++G TGL+ P G      LA+ I
Sbjct: 269 FPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPA--ALAEAI 326

Query: 328 VKLATHVERRLTMGKRGYERVKEIFQEHHMA 358
            +L    E R  +G+   ER +E F    M 
Sbjct: 327 RRLLEDPELRERLGEAARERAEEEFTADRMV 357

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357

>gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 77.3 bits (191), Expect = 1e-15
 Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 19/198 (9%)

Query: 164 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 223
           R  +RE LG+  +  L  I+  +   K     L +      L+ +K    P+   +++G 
Sbjct: 180 RARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA----ALLLKK---FPNARLLLVGD 232

Query: 224 DMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITI 283
             + +   E        +  ++D+V  + +   V   L A+DV V +S +  E F  + +
Sbjct: 233 GPD-RANLELLALK---ELGLEDKVILLGERSDVPALLNALDVFVLSSLS--EGFPNVLL 286

Query: 284 EAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVG-KEGITPLAKNIVKLATHVERRLTMGK 342
           EAMA  LPV+ T  G   E+V +  TG L P G  E    LA+ I  L      R  +G+
Sbjct: 287 EAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEA---LAEAIEALLADPALRQALGE 341

Query: 343 RGYERVKEIFQEHHMAER 360
              ER++E F    M E 
Sbjct: 342 AARERIEENFSIEAMVEA 359

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365

>gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 76.9 bits (190), Expect = 1e-15
 Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 8/130 (6%)

Query: 232 ESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLP 291
            S       +  +QD V F+ K   V   L+  D+ +  S+   E FG   +EAMA  +P
Sbjct: 239 RSPAERLARELGLQDDVLFLGKQDHVEELLSIADLFLLPSEK--ESFGLAALEAMACGVP 296

Query: 292 VLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEI 351
           V+ + AGG  E+V +G TG L  VG   +  +A+  + L    E      +    R  E 
Sbjct: 297 VVASNAGGIPEVVKHGETGFLVDVGD--VEAMAEYALSLLEDDELWQEFSRAARNRAAER 354

Query: 352 FQEHHMAERI 361
           F     +ERI
Sbjct: 355 FD----SERI 360

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371

>gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA

 Score = 76.5 bits (189), Expect = 2e-15
 Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 4/137 (2%)

Query: 233 SELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPV 292
           S     V +  + DRV F+ K   VA  L+  D+ +  S+   E FG   +EAMA  +PV
Sbjct: 242 SPAEQLVRELGLTDRVLFLGKQDDVAELLSISDLFLLPSEK--ESFGLAALEAMACGVPV 299

Query: 293 LGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIF 352
           + + AGG  E+V +G TG L  VG   +  +A+  + L    E          ER KE F
Sbjct: 300 IASNAGGIPEVVEHGVTGFLCDVGD--VETMAEYAISLLEDEELLQRFSAAARERAKERF 357

Query: 353 QEHHMAERIAVVLKEVL 369
               +  +   + + +L
Sbjct: 358 DSEKIVPQYEALYRRLL 374

Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374

>gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1

 Score = 71.5 bits (176), Expect = 5e-15
 Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 21/171 (12%)

Query: 182 IINSVSRG---KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNY 238
           II  V R    KG DL L    E+  L+KE+    P++  VI+G       + E +L+  
Sbjct: 4   IILFVGRLVPEKGLDLLL----EAFALLKEQH---PNLKLVIVGDG-----EEEKKLKKL 51

Query: 239 VMQKKIQDRVHFVN--KTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA 296
            ++  ++D V FV       +       D+ V  S+   E FG + +EAMA  +PV+ T 
Sbjct: 52  ALKLGLEDNVIFVGFVPDEDLIELYRIADLFVLPSRY--EGFGLVLLEAMAAGVPVIATD 109

Query: 297 AGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYER 347
            GG  EIV +G TGLL   G      LA+ I KL    E R  +G+   +R
Sbjct: 110 VGGPAEIVKDGETGLLVDPGD--AEALAEAIEKLLKDEELRERLGENARKR 158

Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158

>gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 73.3 bits (181), Expect = 3e-14
 Identities = 56/179 (31%), Positives = 77/179 (43%), Gaps = 21/179 (11%)

Query: 182 IINSVSR---GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIG--SDMNAQTKFESELR 236
            I +V R    KG D  + ++ E  EL +   L       VI+G   D       E ELR
Sbjct: 222 RILAVGRLDPRKGIDTLIRAYAELPELRERANL-------VIVGGPRDDILAMD-EEELR 273

Query: 237 NYVMQKKIQDRVHFVNKTLT---VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 293
               +  + DRV F    ++   +     A DV V    A  E FG   +EAMA  LPV+
Sbjct: 274 ELARELGVIDRVDFP-GRVSREDLPALYRAADVFVN--PALYEPFGLTALEAMACGLPVV 330

Query: 294 GTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIF 352
            TA GG  +IVV+G TGLL          LA  + +L T    R  + + G  R +  +
Sbjct: 331 ATAVGGPRDIVVDGVTGLLVDPRDPEA--LAAALRRLLTDPALRRRLSRAGLRRARARY 387

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398

>gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 73.0 bits (180), Expect = 3e-14
 Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 17/162 (10%)

Query: 190 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 249
           KG DL + ++ +  +   + KL        I+G            L   + +  ++DRV 
Sbjct: 191 KGFDLLIEAWAKIAKKHPDWKL-------RIVGDG-----PEREALEALIKELGLEDRVI 238

Query: 250 FVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA-GGTTEIVVNGT 308
            +  T  +  Y A   + V  S+   E F  + +EAMAF LPV+      G +EI+ +G 
Sbjct: 239 LLGFTKNIEEYYAKASIFVLTSRF--EGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGV 296

Query: 309 TGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKE 350
            GLL P G      LA+ +++L    E R  MG    E  + 
Sbjct: 297 NGLLVPNGDVEA--LAEALLRLMEDEELRKRMGANARESAER 336

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348

>gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 70.8 bits (174), Expect = 2e-13
 Identities = 61/262 (23%), Positives = 100/262 (38%), Gaps = 50/262 (19%)

Query: 131 RLRIKMPDTYVVHLGN-SKELMEVA-EDNVAK---------RVLREHVRESLGVRNEDLL 179
           RL ++  D  +V      + L+  A  + +A              E ++   G+    +L
Sbjct: 129 RLLLRRADAVIVMSSELLRALLLRAYPEKIAVIPHGVPDPPAEPPESLKALGGLDGRPVL 188

Query: 180 --FAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRN 237
             F ++      KG +L L    E+L L+  K    P V  ++ G       ++  E   
Sbjct: 189 LTFGLL---RPYKGLELLL----EALPLLVAK---HPDVRLLVAGETHPDLERYRGEAYA 238

Query: 238 YVMQKKIQDRVHFVNKTLT---VAPYLAAIDVLV------QNSQ----AWGECFGRITIE 284
              +  + DRV F+N+ L    +    +A DV+V        +Q    A+          
Sbjct: 239 LAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAY---------- 288

Query: 285 AMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRG 344
           A+ F  PV+ T  G   E V++G TGLL P G      LA+ I +L    E    +  R 
Sbjct: 289 AIGFGKPVISTPVGHAEE-VLDGGTGLLVPPGDP--AALAEAIRRLLADPELAQALRARA 345

Query: 345 YERVKEIFQEHHMAERIAVVLK 366
            E  +       +AER   +L 
Sbjct: 346 REYARA-MSWERVAERYLRLLA 366

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366

>gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 67.7 bits (166), Expect = 2e-12
 Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 22/160 (13%)

Query: 190 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 249
           KG DL L    E+ + +    +E+     VI+G+ +  + +            +   RV 
Sbjct: 204 KGVDLLL----EAFKRLPRGDIEL-----VIVGNGLELEEESYEL--------EGDPRVE 246

Query: 250 FV--NKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 307
           F+       +  + A IDVLV  S  W E F  +  EA+A  +PV+ +  GG  E+V +G
Sbjct: 247 FLGAYPQEEIDDFYAEIDVLVVPSI-WPENFPLVIREALAAGVPVIASDIGGMAELVRDG 305

Query: 308 TTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYER 347
             GLL P G      LA  + +L    +    +       
Sbjct: 306 VNGLLFPPG--DAEDLAAALERLIDDPDLLERLRAGIEPP 343

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359

>gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 66.9 bits (164), Expect = 4e-12
 Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 25/182 (13%)

Query: 189 GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS-DMNAQTKFESELRNYVMQKKIQDR 247
           G+ Q L   +  E+  L+K++    P +  +I+G          + EL+       + D 
Sbjct: 230 GRAQGL--DTLLEAAALLKDR----PDIRFLIVGDGPE------KEELKELAKALGL-DN 276

Query: 248 VHF---VNKTLTVAPYLAAIDVLVQNSQAWGECFGRIT----IEAMAFQLPVLGTAAGGT 300
           V F   V K   +   LAA DV +      G  F  ++     E MA   PVL +  G +
Sbjct: 277 VTFLGRVPKE-ELPELLAAADVGL-VPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGES 334

Query: 301 TEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAER 360
            E+V     GL+ P G      LA  I++L    E R  MG+ G   V+E F    +AER
Sbjct: 335 AELVEEAGAGLVVPPGD--PEALAAAILELLDDPEERAEMGENGRRYVEEKFSREKLAER 392

Query: 361 IA 362
           + 
Sbjct: 393 LL 394

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394

>gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria

 Score = 66.0 bits (162), Expect = 5e-12
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)

Query: 190 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 249
           KG D  L    E+L L+K++ ++       I+G           EL   + +  ++DRV 
Sbjct: 192 KGLDYLL----EALALLKDRGIDF---RLDIVGDG-----PLRDELEALIAELGLEDRVT 239

Query: 250 F---VNKTLTVAPYLAAIDVLVQNSQAWG----ECFGRITIEAMAFQLPVLGTAAGGTTE 302
                ++   V   L A D+ V  S        E    + +EAMA  LPV+ T   G  E
Sbjct: 240 LLGAKSQE-EVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPE 298

Query: 303 IVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAER 360
           +V +G TGLL P G      LA  I +L    E R  MG+ G  RV+E F     A R
Sbjct: 299 LVEDGETGLLVPPGD--PEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAAR 354

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355

>gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 65.3 bits (160), Expect = 9e-12
 Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 29/214 (13%)

Query: 160 KRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAV 219
           + V  +  R  LG+  ++ +   +  +++ K  D  + +F   L+       E P V  V
Sbjct: 185 EPVDGDDERRKLGIPEDEPVLLYVGRLAKEKNIDFLIRAFARLLK-------EEPDVKLV 237

Query: 220 IIGSDMNAQTKFESELRNYVMQKKIQDRVHFV-----NKTLTVAPYLAAIDVLVQNSQAW 274
           I+G D         EL     +  + DRV F       +   +  Y  A D+ V  S   
Sbjct: 238 IVG-DGPE----REELEELARELGLADRVIFTGFVPREE---LPDYYKAADLFVFASTT- 288

Query: 275 GECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHV 334
            E  G + +EAMA  LPV+   A G  ++V +G  G L P G E    LA+ +++L    
Sbjct: 289 -ETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE---ALAEALLRLLQDP 344

Query: 335 ERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEV 368
           E R  + K   E  +    +   A+++  + +EV
Sbjct: 345 ELRRRLSKNAEESAE----KFSFAKKVEKLYEEV 374

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374

>gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score = 63.8 bits (156), Expect = 3e-11
 Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 15/157 (9%)

Query: 213 VPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQN 270
           VP V  VIIG          + L        +  RV F+       V   +    + +Q 
Sbjct: 217 VPEVRLVIIG-----DGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQP 271

Query: 271 SQ--AWGEC--FGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEG-ITPLAK 325
           S     G+      + +EA A  +PV+ T  GG  E V +G TGLL P   EG +  LA 
Sbjct: 272 SVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVP---EGDVAALAA 328

Query: 326 NIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIA 362
            + +L    + R  MG  G  RV+E F       ++ 
Sbjct: 329 ALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKLE 365

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367

>gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

 Score = 63.1 bits (154), Expect = 5e-11
 Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 27/187 (14%)

Query: 162 VLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII 221
             R  +R +LGV+N+  +   +  +   K     L +F + L    + KL       +I 
Sbjct: 173 ARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKL-------LIA 225

Query: 222 GSDMNAQTKFESELRNYVMQK----KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGEC 277
           G         +  LR  + +      + +RV  +     +A Y  A D+ V +S AW E 
Sbjct: 226 G---------DGPLRATLERLIKALGLSNRVKLLGLRDDIAAYYNAADLFVLSS-AW-EG 274

Query: 278 FGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH-VER 336
           FG +  EAMA +LPV+ T AGG  E+V  G +GL+ P+       LA  I ++     E 
Sbjct: 275 FGLVVAEAMACELPVVATDAGGVREVV--GDSGLIVPISD--PEALANKIDEILKMSGEE 330

Query: 337 RLTMGKR 343
           R  +G R
Sbjct: 331 RDIIGAR 337

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360

>gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 63.0 bits (154), Expect = 6e-11
 Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 29/203 (14%)

Query: 164 REHVRESLGVRNED---LLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVI 220
           +   R+ LG+   D   +LF  +      KG D  +    E+L+ + E+  +   +  V+
Sbjct: 178 KREARKRLGL-PADKKIILFGAVGGTDPRKGFDELI----EALKRLAERWKD--DIELVV 230

Query: 221 IGSDMNAQTKFESELRNYVMQKKIQDRVHF---VNKTLTVAPYLAAIDVLVQNSQAWGEC 277
            G+  + +   +               VH+   +N   ++A   +A DV V  S    E 
Sbjct: 231 FGAS-DPEIPPDLPFP-----------VHYLGSLNDDESLALIYSAADVFVVPSLQ--EN 276

Query: 278 FGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERR 337
           F    IEA+A   PV+    GG  +IV +G TG L   G      LA+ I  L    + R
Sbjct: 277 FPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGD--PEDLAEGIEWLLADPDER 334

Query: 338 LTMGKRGYERVKEIFQEHHMAER 360
             +G+   E  +  F     A+R
Sbjct: 335 EELGEAARELAENEFDSRVQAKR 357

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365

>gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 62.2 bits (152), Expect = 9e-11
 Identities = 56/190 (29%), Positives = 84/190 (44%), Gaps = 25/190 (13%)

Query: 183 INSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDM-----NAQTKFESELRN 237
           IN   R K   L + +F     ++K+K  E  +V  VI G        N +   E EL+ 
Sbjct: 217 INRFERKKNIALAIEAF----AILKDKLAEFKNVRLVIAGGYDPRVAENVEY-LE-ELQR 270

Query: 238 YVMQKK-IQDRVHF---VNKTLTVAPYLAAIDVLV--QNSQAWGECFGRITIEAMAFQLP 291
              +   ++D+V F   ++ +       +A  +L    N     E FG + +EAM    P
Sbjct: 271 LAEELLLLEDQVIFLPSISDSQKELLLSSARALLYTPSN-----EHFGIVPLEAMYAGKP 325

Query: 292 VLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEI 351
           V+   +GG  E VV+G TG L     E     A+ ++KLA   +    MG  G +RVKE 
Sbjct: 326 VIACNSGGPLETVVDGETGFLCEPTPEE---FAEAMLKLANDPDLADRMGAAGRKRVKEK 382

Query: 352 FQEHHMAERI 361
           F     AER+
Sbjct: 383 FSTEAFAERL 392

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392

>gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 61.1 bits (149), Expect = 2e-10
 Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 4/93 (4%)

Query: 256 TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPV 315
            +A   A+ DV V  S+   E FG + +EAMA  LPV+   AGG  +IV +G  GLL   
Sbjct: 259 ELAAAYASADVFVFPSRT--ETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEP 316

Query: 316 GKEGITPLAKNIVKLATHVERRLTMGKRGYERV 348
           G       A  +  L    E R  M  R     
Sbjct: 317 GDAE--AFAAALAALLADPELRRRMAARARAEA 347

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364

>gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family

 Score = 60.6 bits (147), Expect = 4e-10
 Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 9/129 (6%)

Query: 248 VHFVNKTLT---VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIV 304
           + ++NK L    +   L+  +V V  S    E  G + +EAMA   PV+ +A GG  E+V
Sbjct: 262 IIWINKMLPKEELVELLSNAEVFVCPSIY--EPLGIVNLEAMACGTPVVASATGGIPEVV 319

Query: 305 VNGTTGLLHPVGKEGITP----LAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAER 360
           V+G TG L P            LAK I  L    E    MG  G +R +E F    +A++
Sbjct: 320 VDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIAGRKRAEEEFSWGSIAKK 379

Query: 361 IAVVLKEVL 369
              + ++VL
Sbjct: 380 TVEMYRKVL 388

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388

>gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated

 Score = 60.1 bits (146), Expect = 5e-10
 Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 4/113 (3%)

Query: 257 VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVG 316
           V   + A+D+ V  S A  E      +EAMA  LPV+ TA GG  E+V +G TG L P G
Sbjct: 266 VPALMQALDLFVLPSLA--EGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPG 323

Query: 317 KEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVL 369
                 LA+ +    +    R   G  G  R ++ F  + M    A +  ++L
Sbjct: 324 DA--VALARALQPYVSDPAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQLL 374

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374

>gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score = 58.0 bits (140), Expect = 9e-10
 Identities = 49/175 (28%), Positives = 70/175 (40%), Gaps = 19/175 (10%)

Query: 141 VVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFY 200
              L     ++ V   N +          +L +   D +F  +  ++  KG D  + +F 
Sbjct: 70  AARLLGIPLVLTVHGVNRSLLEGVPLSLLALSIGLADKVF--VGRLAPEKGLDDLIEAF- 126

Query: 201 ESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFV---NKTLTV 257
                    K   P +  VI G     +   E           + DRV F+   +    +
Sbjct: 127 ------ALLKERGPDLKLVIAGDGPEREYLEELLAALL-----LLDRVIFLGGLDPEELL 175

Query: 258 APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLL 312
           A  LAA DV V  S    E FG + +EAMA  LPV+ T  GG  EIV +G TGLL
Sbjct: 176 ALLLAAADVFVLPS--LREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLL 228

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229

>gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 54.2 bits (131), Expect = 5e-08
 Identities = 47/180 (26%), Positives = 72/180 (40%), Gaps = 25/180 (13%)

Query: 190 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 249
           K    F+ +     +       ++P     +IG         E E R  V    ++D V 
Sbjct: 306 KDIKTFIRAAAIVRK-------KIPDAEGWVIGPTDEDPEYAE-ECRELVESLGLEDNVK 357

Query: 250 F---VNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN 306
           F    N    V  YL  +DVLV  S +  E    + +EAMA  +PV+ T  G   E++  
Sbjct: 358 FTGFQN----VKEYLPKLDVLVLTSIS--EGQPLVILEAMAAGIPVVATDVGSCRELIEG 411

Query: 307 GTTGLLHPVGKEGITP------LAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAER 360
                L P G   + P      LA+ I++L    E R  MG+ G +RV+  +    M + 
Sbjct: 412 ADDEALGPAG--EVVPPADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDS 469

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475

>gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

 Score = 53.6 bits (129), Expect = 7e-08
 Identities = 59/255 (23%), Positives = 103/255 (40%), Gaps = 45/255 (17%)

Query: 119 VTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNED- 177
           V +++ K    ER    +P+  +  + N   L     +       + ++R+ L +  ++ 
Sbjct: 145 VPSQFLKKFYEER----LPNADISIVPNGFCLETYQSNP------QPNLRQQLNISPDET 194

Query: 178 -LLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELR 236
            LL+A    +S  KG  L + +F +        KL       V++G    +    ++  +
Sbjct: 195 VLLYA--GRISPDKGILLLMQAFEKLATAHSNLKL-------VVVGDPTASSKGEKAAYQ 245

Query: 237 NYVMQ--KKIQDRVHFVNKTLTVAP-----YLAAIDVLVQNSQAWGECFGRITIEAMAFQ 289
             V++  K+I DR   +       P     Y    D++V  SQ   E F  + +EAMA  
Sbjct: 246 KKVLEAAKRIGDRCIMLG---GQPPEKMHNYYPLADLVVVPSQ-VEEAFCMVAVEAMAAG 301

Query: 290 LPVLGTAAGGTTEIVVNGTTG--LLHPVGKEGITPLAKNIVKLATHVE--------RRLT 339
            PVL +  GG TE V+ G TG  L  P+  + I     +I +     E        +   
Sbjct: 302 KPVLASTKGGITEFVLEGITGYHLAEPMTSDSI---ISDINRTLADPELTQIAEQAKDFV 358

Query: 340 MGKRGYERVKEIFQE 354
             K  +E V + F+E
Sbjct: 359 FSKYSWEGVTQRFEE 373

Length = 380

>gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system

 Score = 53.1 bits (128), Expect = 1e-07
 Identities = 49/218 (22%), Positives = 89/218 (40%), Gaps = 32/218 (14%)

Query: 155 EDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVP 214
           E      V R+ +R+ LG   ++ +   +  +   KG D  + +F     ++K+     P
Sbjct: 205 EAIYLSEVERKKLRKKLGFSEDEKIILFVGRLDEIKGVDYLIEAF---KIVLKKD----P 257

Query: 215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHF---VNKTLTVAPYLAAIDVLVQNS 271
           +   VI+G D +     +         KKI  ++ F   ++K      Y  A DV V  S
Sbjct: 258 NCRLVIVG-DGDYSRYLQ-------ECKKIWSKITFTGKLDKEKLYELYQIA-DVGVLPS 308

Query: 272 QAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEG------ITPLAK 325
               E    + IE M   LP++GT + G +E++ +G  G   P+ +           L +
Sbjct: 309 FH--EQCSYVAIEMMMHGLPLIGTTSTGLSEMIEDGLNGYKIPIKEYRDYVELDKKELVQ 366

Query: 326 NIVKLATHVERRLTMGKRGYERVKE-----IFQEHHMA 358
            ++KL +  +    MGK    R  E     + +E+  +
Sbjct: 367 KLLKLLSSSDEAKQMGKNARRRYLEKYSLEVMRENMKS 404

Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406

>gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase

 Score = 50.5 bits (121), Expect = 7e-07
 Identities = 50/188 (26%), Positives = 74/188 (39%), Gaps = 17/188 (9%)

Query: 164 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 223
           R   R  LG+  +  + A +  +   K  D+ L +  E L+   ++ L V      ++G 
Sbjct: 206 RATERARLGLPLDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVI-----VVGG 260

Query: 224 DMNAQTKFESELRNYVMQKKIQDRVHF---VNKTLTVAPYLAAIDVLVQNSQAWGECFGR 280
              +       L     +  I DRV F         V  Y AA DV+   S  + E FG 
Sbjct: 261 PSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAA-DVVAVPS--YNESFGL 317

Query: 281 ITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITP--LAKNIVKLATHVERRL 338
           + +EA A   PV+    GG    V +G TGLL     +G  P   A  + +L      R+
Sbjct: 318 VAMEAQACGTPVVAARVGGLPVAVADGETGLL----VDGHDPADWADALARLLDDPRTRI 373

Query: 339 TMGKRGYE 346
            MG    E
Sbjct: 374 RMGAAAVE 381

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405

>gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

 Score = 48.0 bits (115), Expect = 4e-06
 Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 18/158 (11%)

Query: 203 LELIKEKKLEVPSVHAVIIGS----DMNAQTKFESELRNYVMQKKIQDRVHFVN----KT 254
           ++  ++ K  VP    V++GS    D      +E E+  Y    +    +H +       
Sbjct: 209 IDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYE-EVLEY---AEGDPDIHVLTLPPVSD 264

Query: 255 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHP 314
           L V     A  V++Q S    E FG    EA+    PV+    GG    + +G TG L  
Sbjct: 265 LEVNALQRASTVVLQKSI--REGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD 322

Query: 315 VGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIF 352
             +E     A  I+ L    E R  MG    E V+E F
Sbjct: 323 TVEE----AAVRILYLLRDPELRRKMGANAREHVRENF 356

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372

>gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 48.1 bits (115), Expect = 4e-06
 Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 20/175 (11%)

Query: 190 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 249
           KG DL + +F      + E     P  H VI G D   +  + +EL+       ++DRV 
Sbjct: 216 KGLDLLIEAF----AKLAE---RFPDWHLVIAGPD---EGGYRAELKQIAAALGLEDRVT 265

Query: 250 F---VNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN 306
           F   +      A    A D+ V  S +  E FG +  EA+A   PV+ T      E++  
Sbjct: 266 FTGMLYGEDKAAALADA-DLFVLPSHS--ENFGIVVAEALACGTPVVTTDKVPWQELIEY 322

Query: 307 GTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERI 361
           G       V  + +  LA  + +     +R   MG+ G   V+E F    +A+++
Sbjct: 323 GCGW----VVDDDVDALAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQQL 373

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375

>gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

 Score = 47.0 bits (112), Expect = 1e-05
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 7/92 (7%)

Query: 262 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN---GTTGLLHPVGKE 318
           A+ DV V  S++  E  G + +EAMA  +PV+   AGG  +I+     G TG L+  G  
Sbjct: 330 ASGDVFVMPSES--ETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGD- 386

Query: 319 GITPLAKNIVKLATHVERRLTMGKRGYERVKE 350
            +    + +  L    E R  MG    E V++
Sbjct: 387 -VDDCVEKLETLLADPELRERMGAAAREEVEK 417

Length = 465

>gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 14/89 (15%)

Query: 274 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 333
           W E FG + IEAMA   PV+    G   E+V +G TG            L  ++ +LA  
Sbjct: 253 WEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGF-----------LVDSVEELAAA 301

Query: 334 VERRLTMGKRGYERVKEIFQEHHMAERIA 362
           V R   + +      +   +    A R+ 
Sbjct: 302 VARADRLDRA---ACRRRAERRFSAARMV 327

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335

>gnl|CDD|99997 cd04946, GT1_AmsK_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 42.3 bits (100), Expect = 3e-04
 Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 5/71 (7%)

Query: 284 EAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITP--LAKNIVKLATHVERRLTMG 341
           EAM+F +PV+ T  GGT EIV NG  GLL     +  TP  L  ++ K   + E   TM 
Sbjct: 329 EAMSFGIPVIATNVGGTPEIVDNGGNGLLLS---KDPTPNELVSSLSKFIDNEEEYQTMR 385

Query: 342 KRGYERVKEIF 352
           ++  E+ +E F
Sbjct: 386 EKAREKWEENF 396

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. Length = 407

>gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase

 Score = 41.2 bits (97), Expect = 7e-04
 Identities = 15/36 (41%), Positives = 19/36 (52%)

Query: 276 ECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGL 311
           E FG   +EAM   LP   T  GG  EI+ +G +G 
Sbjct: 654 EAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGF 689

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784

>gnl|CDD|185387 PRK15490, PRK15490, Vi polysaccharide biosynthesis protein TviE; Provisional

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 9/100 (9%)

Query: 214 PSVHAVIIGS-DMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQ 272
           P+   V++G  D+ A+ +  +E      Q  I +R+ FV  +  V  +L  ++V +  S+
Sbjct: 428 PATRFVLVGDGDLRAEAQKRAE------QLGILERILFVGASRDVGYWLQKMNVFILFSR 481

Query: 273 AWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLL 312
             G     + IEA    +PV+ T AGG+ E  + G +G +
Sbjct: 482 YEG--LPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFI 519

Length = 578

>gnl|CDD|222197 pfam13524, Glyco_trans_1_2, Glycosyl transferases group 1

 Score = 37.6 bits (88), Expect = 0.001
 Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 7/81 (8%)

Query: 282 TIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMG 341
             EA A   P+L     G  E+   G   +L+   +E    LA+ +  L    E R  + 
Sbjct: 15  VFEAAACGAPLLTDRTPGLEELFEPGEEIVLYRDPEE----LAEKLRYLLADPEERRAIA 70

Query: 342 KRGYERVKEIFQEHHMAERIA 362
             G ERV     EH    R  
Sbjct: 71  AAGRERVL---AEHTYEHRAE 88

Length = 92

>gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 40.2 bits (95), Expect = 0.001
 Identities = 17/37 (45%), Positives = 23/37 (62%)

Query: 276 ECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLL 312
           E FG + +EAMA   PV+    GG  E V++G TG+L
Sbjct: 271 EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGIL 307

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351

>gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 38.9 bits (91), Expect = 0.003
 Identities = 54/249 (21%), Positives = 82/249 (32%), Gaps = 47/249 (18%)

Query: 125 KNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 184
           K      L +      V+ LG       V           E +R    +     L+  + 
Sbjct: 152 KRDLLRYLGVPPDKIVVIPLG-------VDPRFRPPPAEAEVLRALYLLPRPYFLY--VG 202

Query: 185 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI 244
           ++   K  +  L +F        + KL       VI+G       +  + LR    +  +
Sbjct: 203 TIEPRKNLERLLEAFARLPAKGPDPKL-------VIVGKRGWLNEELLARLR----ELGL 251

Query: 245 QDRVHFVNKTLTVA-PYLAAIDVLVQNSQA-----WGECFGRITIEAMAFQLPVLGTAAG 298
            DRV F+     V+   LAA   L + ++A       E FG   +EAMA   PV+ +   
Sbjct: 252 GDRVRFLGY---VSDEELAA---LYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNIS 305

Query: 299 GTTEIVVNGTTGLLHPVGKEGITP-----LAKNIVKLATHVERRLTMGKRGYERVKEIFQ 353
              E+   G   L          P     LA  I +L      R  + +RG  R K  F 
Sbjct: 306 SLPEVA--GDAALY-------FDPLDPEALAAAIERLLEDPALREELRERGLARAKR-FS 355

Query: 354 EHHMAERIA 362
               A R  
Sbjct: 356 WEKTARRTL 364

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365

>gnl|CDD|234452 TIGR04063, stp3, PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family

 Score = 38.8 bits (91), Expect = 0.004
 Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 17/123 (13%)

Query: 232 ESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRIT------- 282
           E  LR       + DRV F  +     V  Y + IDVL            R+T       
Sbjct: 256 EEALRAQAAALGLADRVVFTGRVPHDEVERYYSLIDVLAYPRLPM-----RLTELVTPLK 310

Query: 283 -IEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMG 341
            +EAMA    V  +  GG  E++ +G TG+L P G      LA  ++ L  +  +   + 
Sbjct: 311 PLEAMAQGRLVAASDVGGHRELIRDGETGVLFPAGDP--AALAAALLALLDNRAQWPELR 368

Query: 342 KRG 344
              
Sbjct: 369 AAA 371

PEP-CTERM/exosortase is a protein-sorting system associated with exopolysaccharide production. Members of this protein family are group 1 glycosyltransferases (see pfam00534) in which the overwhelming majority occur in species with the EpsH1 form of exosortase (see TIGR03109), and usually co-clustered with the exosortase. A typical member is Daro_2409 from Dechloromonas aromatica RCB. Length = 397

>gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1

 Score = 36.9 bits (86), Expect = 0.004
 Identities = 37/156 (23%), Positives = 56/156 (35%), Gaps = 24/156 (15%)

Query: 178 LLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRN 237
           +            G    L    E+L L+++    +P V   IIGS          EL  
Sbjct: 3   VFIGGFGHAPNWDGLLWLLE---EALPLLRKA---LPDVELHIIGSGPE-------ELAR 49

Query: 238 YVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA 297
                     VHF+     +A  LA+ DV +     +G       +EA+A  LPV+ T  
Sbjct: 50  LA------PNVHFLGFVEDLAALLASADVAL-APLRFGAGSPLKLLEALAAGLPVVATDI 102

Query: 298 GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 333
            G   +  +   G+L     E     A+ IV+L   
Sbjct: 103 -GAEGLPEDLGWGVLVADDPEEF---AEAIVRLLAD 134

Length = 134

>gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase

 Score = 38.8 bits (91), Expect = 0.004
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 276 ECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTG 310
           E FG   +EAM   LP   T  GG  EI+V+G +G
Sbjct: 677 EAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSG 711

Length = 815

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	377
TIGR03088	374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	100.0
TIGR03449	405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	100.0
PRK15427	406	colanic acid biosynthesis glycosyltransferase WcaL	100.0
cd03796	398	GT1_PIG-A_like This family is most closely related	100.0
cd04962	371	GT1_like_5 This family is most closely related to	100.0
TIGR02472	439	sucr_P_syn_N sucrose-phosphate synthase, putative,	100.0
PRK10307	412	putative glycosyl transferase; Provisional	100.0
PLN02871	465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	100.0
PLN02316	1036	synthase/transferase	100.0
cd03819	355	GT1_WavL_like This family is most closely related	100.0
PRK00654	466	glgA glycogen synthase; Provisional	100.0
PRK15179	694	Vi polysaccharide biosynthesis protein TviE; Provi	100.0
PRK15490	578	Vi polysaccharide biosynthesis protein TviE; Provi	100.0
PRK15484	380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	100.0
cd03792	372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	100.0
PLN02939	977	transferase, transferring glycosyl groups	100.0
TIGR02149	388	glgA_Coryne glycogen synthase, Corynebacterium fam	100.0
cd03818	396	GT1_ExpC_like This family is most closely related	100.0
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	100.0
cd04951	360	GT1_WbdM_like This family is most closely related	100.0
TIGR02095	473	glgA glycogen/starch synthases, ADP-glucose type.	100.0
PRK14099	485	glycogen synthase; Provisional	100.0
cd05844	367	GT1_like_7 Glycosyltransferases catalyze the trans	100.0
cd03807	365	GT1_WbnK_like This family is most closely related	100.0
cd03800	398	GT1_Sucrose_synthase This family is most closely r	100.0
cd03813	475	GT1_like_3 This family is most closely related to	100.0
TIGR02470	784	sucr_synth sucrose synthase. This model represents	100.0
cd03791	476	GT1_Glycogen_synthase_DULL1_like This family is mo	100.0
cd03805	392	GT1_ALG2_like This family is most closely related	100.0
cd03799	355	GT1_amsK_like This is a family of GT1 glycosyltran	100.0
PRK09922	359	UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D	100.0
PRK14098	489	glycogen synthase; Provisional	100.0
cd03812	358	GT1_CapH_like This family is most closely related	100.0
PLN00142	815	sucrose synthase	100.0
cd03816	415	GT1_ALG1_like This family is most closely related	100.0
cd03825	365	GT1_wcfI_like This family is most closely related	100.0
cd03822	366	GT1_ecORF704_like This family is most closely rela	100.0
cd03821	375	GT1_Bme6_like This family is most closely related	100.0
cd03795	357	GT1_like_4 This family is most closely related to	100.0
cd03801	374	GT1_YqgM_like This family is most closely related	100.0
cd03808	359	GT1_cap1E_like This family is most closely related	100.0
cd03820	348	GT1_amsD_like This family is most closely related	100.0
cd03814	364	GT1_like_2 This family is most closely related to	100.0
cd04955	363	GT1_like_6 This family is most closely related to	100.0
cd03802	335	GT1_AviGT4_like This family is most closely relate	100.0
TIGR03087	397	stp1 sugar transferase, PEP-CTERM/EpsH1 system ass	100.0
TIGR02918	500	accessory Sec system glycosylation protein GtfA. M	100.0
cd03817	374	GT1_UGDG_like This family is most closely related	100.0
PRK10125	405	putative glycosyl transferase; Provisional	100.0
cd03811	353	GT1_WabH_like This family is most closely related	100.0
PLN02949	463	transferase, transferring glycosyl groups	100.0
cd03806	419	GT1_ALG11_like This family is most closely related	100.0
KOG1111	426	consensus N-acetylglucosaminyltransferase complex,	100.0
cd03809	365	GT1_mtfB_like This family is most closely related	100.0
PLN02846	462	digalactosyldiacylglycerol synthase	100.0
cd03798	377	GT1_wlbH_like This family is most closely related	100.0
cd03794	394	GT1_wbuB_like This family is most closely related	100.0
cd03823	359	GT1_ExpE7_like This family is most closely related	100.0
cd04946	407	GT1_AmsK_like This family is most closely related	100.0
PHA01630	331	putative group 1 glycosyl transferase	100.0
cd04949	372	GT1_gtfA_like This family is most closely related	100.0
PLN02501	794	digalactosyldiacylglycerol synthase	100.0
PHA01633	335	putative glycosyl transferase group 1	100.0
PLN02275	371	transferase, transferring glycosyl groups	100.0
cd03804	351	GT1_wbaZ_like This family is most closely related	99.97
PRK05749	425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	99.97
TIGR02400	456	trehalose_OtsA alpha,alpha-trehalose-phosphate syn	99.97
cd03788	460	GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a	99.97
KOG0853	495	consensus Glycosyltransferase [Cell wall/membrane/	99.97
cd03793	590	GT1_Glycogen_synthase_GSY2_like Glycogen synthase,	99.97
PRK00726	357	murG undecaprenyldiphospho-muramoylpentapeptide be	99.97
cd03785	350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	99.96
PLN02605	382	monogalactosyldiacylglycerol synthase	99.96
TIGR01133	348	murG undecaprenyldiphospho-muramoylpentapeptide be	99.96
PF00534	172	Glycos_transf_1: Glycosyl transferases group 1; In	99.96
PRK13609	380	diacylglycerol glucosyltransferase; Provisional	99.95
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.95
COG0297	487	GlgA Glycogen synthase [Carbohydrate transport and	99.95
PRK13608	391	diacylglycerol glucosyltransferase; Provisional	99.94
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	99.93
cd04950	373	GT1_like_1 Glycosyltransferases catalyze the trans	99.93
TIGR02398	487	gluc_glyc_Psyn glucosylglycerol-phosphate synthase	99.92
PRK00025	380	lpxB lipid-A-disaccharide synthase; Reviewed	99.9
cd03786	363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	99.9
cd01635	229	Glycosyltransferase_GTB_type Glycosyltransferases	99.9
PRK09814	333	beta-1,6-galactofuranosyltransferase; Provisional	99.89
TIGR00236	365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	99.88
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.86
COG0438	381	RfaG Glycosyltransferase [Cell envelope biogenesis	99.85
KOG1387	465	consensus Glycosyltransferase [Cell wall/membrane/	99.85
TIGR00215	385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	99.82
TIGR03713	519	acc_sec_asp1 accessory Sec system protein Asp1. Th	99.81
TIGR02094	601	more_P_ylases alpha-glucan phosphorylases. This fa	99.81
PF13692	135	Glyco_trans_1_4: Glycosyl transferases group 1; PD	99.79
KOG2941	444	consensus Beta-1,4-mannosyltransferase [Posttransl	99.79
cd04299	778	GT1_Glycogen_Phosphorylase_like This family is mos	99.72
PRK12446	352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	99.71
COG0707	357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	99.7
PF00982	474	Glyco_transf_20: Glycosyltransferase family 20; In	99.68
PF05693	633	Glycogen_syn: Glycogen synthase; InterPro: IPR0086	99.66
PRK10117	474	trehalose-6-phosphate synthase; Provisional	99.66
PF13524	92	Glyco_trans_1_2: Glycosyl transferases group 1	99.59
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	99.58
COG0380	486	OtsA Trehalose-6-phosphate synthase [Carbohydrate	99.58
TIGR02919	438	accessory Sec system glycosyltransferase GtfB. Mem	99.57
TIGR03590	279	PseG pseudaminic acid biosynthesis-associated prot	99.46
COG1519	419	KdtA 3-deoxy-D-manno-octulosonic-acid transferase	99.46
TIGR03492	396	conserved hypothetical protein. This protein famil	99.45
PF02684	373	LpxB: Lipid-A-disaccharide synthetase; InterPro: I	99.39
PF13844	468	Glyco_transf_41: Glycosyl transferase family 41; P	99.38
COG0763	381	LpxB Lipid A disaccharide synthetase [Cell envelop	99.37
PF13439	177	Glyco_transf_4: Glycosyltransferase Family 4; PDB:	99.35
TIGR03568	365	NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,	99.3
PF04007	335	DUF354: Protein of unknown function (DUF354); Inte	99.28
COG3914	620	Spy Predicted O-linked N-acetylglucosamine transfe	99.28
TIGR01426	392	MGT glycosyltransferase, MGT family. This model de	99.2
cd03784	401	GT1_Gtf_like This family includes the Gtfs, a grou	99.2
PRK01021	608	lpxB lipid-A-disaccharide synthase; Reviewed	99.13
PF02350	346	Epimerase_2: UDP-N-acetylglucosamine 2-epimerase;	99.12
COG0381	383	WecB UDP-N-acetylglucosamine 2-epimerase [Cell env	99.1
PF13579	160	Glyco_trans_4_4: Glycosyl transferase 4-like domai	99.07
PF13528	318	Glyco_trans_1_3: Glycosyl transferase family 1	99.01
PRK02797	322	4-alpha-L-fucosyltransferase; Provisional	98.96
TIGR00661	321	MJ1255 conserved hypothetical protein. This model	98.93
PF04464	369	Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate	98.82
COG1817	346	Uncharacterized protein conserved in archaea [Func	98.78
PF07429	360	Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc	98.76
COG4641	373	Uncharacterized protein conserved in bacteria [Fun	98.69
KOG3742	692	consensus Glycogen synthase [Carbohydrate transpor	98.47
PRK14089	347	ipid-A-disaccharide synthase; Provisional	98.47
PF13477	139	Glyco_trans_4_2: Glycosyl transferase 4-like	98.46
COG3980	318	spsG Spore coat polysaccharide biosynthesis protei	98.34
KOG4626	966	consensus O-linked N-acetylglucosamine transferase	98.33
COG0058	750	GlgP Glucan phosphorylase [Carbohydrate transport	98.33
PF09314	185	DUF1972: Domain of unknown function (DUF1972); Int	98.23
PF04101	167	Glyco_tran_28_C: Glycosyltransferase family 28 C-t	98.2
PHA03392	507	egt ecdysteroid UDP-glucosyltransferase; Provision	98.18
COG1819	406	Glycosyl transferases, related to UDP-glucuronosyl	98.15
PRK14986	815	glycogen phosphorylase; Provisional	98.03
PF00343	713	Phosphorylase: Carbohydrate phosphorylase; InterPr	97.99
TIGR02093	794	P_ylase glycogen/starch/alpha-glucan phosphorylase	97.98
cd04300	797	GT1_Glycogen_Phosphorylase This is a family of oli	97.94
PRK14985	798	maltodextrin phosphorylase; Provisional	97.82
COG4671	400	Predicted glycosyl transferase [General function p	97.8
KOG1050	732	consensus Trehalose-6-phosphate synthase component	97.74
PRK10017	426	colanic acid biosynthesis protein; Provisional	97.65
PLN02670	472	transferase, transferring glycosyl groups	97.56
PF00201	500	UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera	97.53
PF11440	355	AGT: DNA alpha-glucosyltransferase; InterPro: IPR0	97.33
PLN02448	459	UDP-glycosyltransferase family protein	97.33
PF06258	311	Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP	97.27
PLN00414	446	glycosyltransferase family protein	97.19
PLN03004	451	UDP-glycosyltransferase	97.19
cd03789	279	GT1_LPS_heptosyltransferase Lipopolysaccharide hep	97.14
PLN03007	482	UDP-glucosyltransferase family protein	97.14
PLN02764	453	glycosyltransferase family protein	97.1
PLN02410	451	UDP-glucoronosyl/UDP-glucosyl transferase family p	97.01
PLN02208	442	glycosyltransferase family protein	97.0
PLN02562	448	UDP-glycosyltransferase	96.94
TIGR03609	298	S_layer_CsaB polysaccharide pyruvyl transferase Cs	96.92
PF12000	171	Glyco_trans_4_3: Gkycosyl transferase family 4 gro	96.89
PLN02210	456	UDP-glucosyl transferase	96.85
PLN02863	477	UDP-glucoronosyl/UDP-glucosyl transferase family p	96.85
PLN02167	475	UDP-glycosyltransferase family protein	96.8
PLN02173	449	UDP-glucosyl transferase family protein	96.72
PLN02555	480	limonoid glucosyltransferase	96.71
COG0859	334	RfaF ADP-heptose:LPS heptosyltransferase [Cell env	96.68
PLN02554	481	UDP-glycosyltransferase family protein	96.66
PLN02992	481	coniferyl-alcohol glucosyltransferase	96.59
PF06925	169	MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy	96.41
PLN00164	480	glucosyltransferase; Provisional	96.32
PF05159	269	Capsule_synth: Capsule polysaccharide biosynthesis	96.26
PLN02152	455	indole-3-acetate beta-glucosyltransferase	96.15
COG3660	329	Predicted nucleoside-diphosphate-sugar epimerase [	96.12
TIGR02195	334	heptsyl_trn_II lipopolysaccharide heptosyltransfer	96.09
PLN02207	468	UDP-glycosyltransferase	95.69
PF15024	559	Glyco_transf_18: Glycosyltransferase family 18	95.64
PRK10422	352	lipopolysaccharide core biosynthesis protein; Prov	95.57
PF08323	245	Glyco_transf_5: Starch synthase catalytic domain;	95.56
PF01075	247	Glyco_transf_9: Glycosyltransferase family 9 (hept	95.51
PF04230	286	PS_pyruv_trans: Polysaccharide pyruvyl transferase	95.42
PRK10916	348	ADP-heptose:LPS heptosyltransferase II; Provisiona	95.36
PLN02534	491	UDP-glycosyltransferase	95.33
PRK10964	322	ADP-heptose:LPS heptosyl transferase I; Provisiona	95.24
TIGR02193	319	heptsyl_trn_I lipopolysaccharide heptosyltransfera	95.24
TIGR02201	344	heptsyl_trn_III lipopolysaccharide heptosyltransfe	94.95
COG1887	388	TagB Putative glycosyl/glycerophosphate transferas	94.86
KOG1192	496	consensus UDP-glucuronosyl and UDP-glucosyl transf	94.79
PF10087	97	DUF2325: Uncharacterized protein conserved in bact	94.66
PLN03015	470	UDP-glucosyl transferase	94.49
KOG3349	170	consensus Predicted glycosyltransferase [General f	93.89
PF03016	302	Exostosin: Exostosin family; InterPro: IPR004263 H	91.42
PF04413	186	Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid	90.49
KOG1021	464	consensus Acetylglucosaminyltransferase EXT1/exost	90.16
PF03033	139	Glyco_transf_28: Glycosyltransferase family 28 N-t	89.92
cd03146	212	GAT1_Peptidase_E Type 1 glutamine amidotransferase	88.42
TIGR03646	144	YtoQ_fam YtoQ family protein. Members of this fami	87.26
COG2327	385	WcaK Polysaccharide pyruvyl transferase family pro	86.5
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	86.26
PRK10840	216	transcriptional regulator RcsB; Provisional	86.06
PRK05282	233	(alpha)-aspartyl dipeptidase; Validated	85.99
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	85.97
PF08660	170	Alg14: Oligosaccharide biosynthesis protein Alg14	85.14
PF11071	141	DUF2872: Protein of unknown function (DUF2872); In	83.74
PRK13940	414	glutamyl-tRNA reductase; Provisional	82.79
smart00672	256	CAP10 Putative lipopolysaccharide-modifying enzyme	82.28
cd03129	210	GAT1_Peptidase_E_like Type 1 glutamine amidotransf	82.17
PF08288	90	PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP	80.74
PRK10360	196	DNA-binding transcriptional activator UhpA; Provis	80.05

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=100.00  E-value=5.5e-44  Score=325.34  Aligned_cols=335  Identities=19%  Similarity=0.221  Sum_probs=255.0

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEcc-----------chhHHHhhhcccEEEEcCchhhh
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK-----------GQETINTALKADLIVLNTAVAGK   70 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~Div~~~~~~~~~   70 (377)
                      +|++.|.+.||++++++......       +...+...|+.++...           .+..++++.+||+||+|+..+..
T Consensus        22 ~l~~~l~~~~~~~~v~~~~~~~~-------~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~l~~~~~Divh~~~~~~~~   94 (374)
T TIGR03088        22 NLINHLPADRYRHAVVALTEVSA-------FRKRIQRPDVAFYALHKQPGKDVAVYPQLYRLLRQLRPDIVHTRNLAALE   94 (374)
T ss_pred             HHHhhccccccceEEEEcCCCCh-------hHHHHHhcCceEEEeCCCCCCChHHHHHHHHHHHHhCCCEEEEcchhHHH
Confidence            68899999999999998543321       2233333455543322           23455677899999999754332


Q ss_pred             HHHHHhhcCCCccccceeEEeeeecccc-----cc-hhhhc-cccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEE
Q 017085           71 WLDAVLKEDVPRVLPNVLWWIHEMRGHY-----FK-LDYVK-HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVH  143 (377)
Q Consensus        71 ~~~~~~~~~~~~~~~~~v~~~h~~~~~~-----~~-~~~~~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~  143 (377)
                      ..........    +..+.+.|......     +. ....+ ..+.++.++++|....+++.+    .++++..++.+||
T Consensus        95 ~~~~~~~~~~----~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vs~~~~~~~~~----~~~~~~~~~~vi~  166 (374)
T TIGR03088        95 AQLPAALAGV----PARIHGEHGRDVFDLDGSNWKYRWLRRLYRPLIHHYVAVSRDLEDWLRG----PVKVPPAKIHQIY  166 (374)
T ss_pred             HHHHHHhcCC----CeEEEeecCcccccchhhHHHHHHHHHHHHhcCCeEEEeCHHHHHHHHH----hcCCChhhEEEec
Confidence            2122112222    22344444321110     10 11111 224678999999988887765    5667778999999


Q ss_pred             cCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEec
Q 017085          144 LGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS  223 (377)
Q Consensus       144 ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~  223 (377)
                      ||+|.+.+.+....      +...++....+++.++++++||+.+.||++.+++++..+.+...+   ..++++|+++|+
T Consensus       167 ngvd~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~---~~~~~~l~i~G~  237 (374)
T TIGR03088       167 NGVDTERFHPSRGD------RSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPE---GAERLRLVIVGD  237 (374)
T ss_pred             cCccccccCCCccc------hhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcc---cccceEEEEecC
Confidence            99998876543211      122334444556789999999999999999999999987654322   124799999999


Q ss_pred             CCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccc
Q 017085          224 DMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEI  303 (377)
Q Consensus       224 ~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~  303 (377)
                      |     +..+.+++.++++++.+++.|.|+.+++.++|+.||++++||.  .||||++++|||+||+|||+|+.|+..|+
T Consensus       238 g-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~pS~--~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~  310 (374)
T TIGR03088       238 G-----PARGACEQMVRAAGLAHLVWLPGERDDVPALMQALDLFVLPSL--AEGISNTILEAMASGLPVIATAVGGNPEL  310 (374)
T ss_pred             C-----chHHHHHHHHHHcCCcceEEEcCCcCCHHHHHHhcCEEEeccc--cccCchHHHHHHHcCCCEEEcCCCCcHHH
Confidence            8     4567889999999999999999999999999999999999999  99999999999999999999999999999


Q ss_pred             eecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 017085          304 VVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVL  369 (377)
Q Consensus       304 ~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  369 (377)
                      +.++.+|++++++|  +++++++|.+++++++.+.++++++++.+.++|||+.+++++.++|++++
T Consensus       311 i~~~~~g~~~~~~d--~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~  374 (374)
T TIGR03088       311 VQHGVTGALVPPGD--AVALARALQPYVSDPAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQLL  374 (374)
T ss_pred             hcCCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhC
Confidence            99999999999988  99999999999999999999999999999999999999999999998763

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase

Probab=100.00  E-value=3.8e-43  Score=323.13  Aligned_cols=336  Identities=20%  Similarity=0.206  Sum_probs=256.6

Q ss_pred             CcHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEcc----------------------chhHHHh--hh
Q 017085            1 MELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK----------------------GQETINT--AL   56 (377)
Q Consensus         1 ~~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~--~~   56 (377)
                      ++|+++|.++||+|+|+|...........      ....|+.+....                      .+..+++  ..
T Consensus        27 ~~la~~L~~~G~~V~v~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (405)
T TIGR03449        27 LETATELARRGIEVDIFTRATRPSQPPVV------EVAPGVRVRNVVAGPYEGLDKEDLPTQLCAFTGGVLRAEARHEPG  100 (405)
T ss_pred             HHHHHHHhhCCCEEEEEecccCCCCCCcc------ccCCCcEEEEecCCCcccCCHHHHHHHHHHHHHHHHHHHhhccCC
Confidence            37899999999999999965432111000      011233333210                      0111122  24


Q ss_pred             cccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeeccc---c------cc----hh-hhccccccceeeeeccchhh
Q 017085           57 KADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGH---Y------FK----LD-YVKHLPLVAGAMIDSHVTAE  122 (377)
Q Consensus        57 ~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~---~------~~----~~-~~~~~~~~~~~~~~s~~~~~  122 (377)
                      +||+||+|....+.+...+..    ....|++.+.|+....   +      ..    .. ....+..+|.+++.|....+
T Consensus       101 ~~Diih~h~~~~~~~~~~~~~----~~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~  176 (405)
T TIGR03449       101 YYDLIHSHYWLSGQVGWLLRD----RWGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEAR  176 (405)
T ss_pred             CCCeEEechHHHHHHHHHHHH----hcCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHH
Confidence            799999998554433222221    1124789999976320   0      00    00 12345788999999998777


Q ss_pred             HhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHH
Q 017085          123 YWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYES  202 (377)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l  202 (377)
                      .+..    .++.+.+++.+||||+|.+.+.+..        +...++++++++++++|+++||+.+.||++.++++++.+
T Consensus       177 ~~~~----~~~~~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~li~a~~~l  244 (405)
T TIGR03449       177 DLVR----HYDADPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKAPDVLLRAVAEL  244 (405)
T ss_pred             HHHH----HcCCChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccCHHHHHHHHHHH
Confidence            6654    5667778899999999998775332        345677889888889999999999999999999999987


Q ss_pred             HHHHhhhcccCCC--eEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCcc
Q 017085          203 LELIKEKKLEVPS--VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECF  278 (377)
Q Consensus       203 ~~~l~~~~~~~~~--~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~  278 (377)
                      .+       +.++  ++|+|+|++.....+..++++++++++++.++|+|+|+.  +++.++|+.||++++||.  .|++
T Consensus       245 ~~-------~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~--~E~~  315 (405)
T TIGR03449       245 LD-------RDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSY--NESF  315 (405)
T ss_pred             Hh-------hCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEECCC--CCCc
Confidence            55       3354  999999974322213567899999999999999999986  789999999999999999  9999


Q ss_pred             chHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHH
Q 017085          279 GRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMA  358 (377)
Q Consensus       279 ~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~  358 (377)
                      |++++|||++|+|||+++.|+.+|++.++.+|++++++|  +++++++|.+++++++.+.+++.++++.+ ++|||+.++
T Consensus       316 g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d--~~~la~~i~~~l~~~~~~~~~~~~~~~~~-~~fsw~~~~  392 (405)
T TIGR03449       316 GLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHD--PADWADALARLLDDPRTRIRMGAAAVEHA-AGFSWAATA  392 (405)
T ss_pred             ChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHH-HhCCHHHHH
Confidence            999999999999999999999999999999999999888  99999999999999999999999999876 679999999


Q ss_pred             HHHHHHHHHHHh
Q 017085          359 ERIAVVLKEVLK  370 (377)
Q Consensus       359 ~~~~~~~~~~~~  370 (377)
                      +++.++|.+++.
T Consensus       393 ~~~~~~y~~~~~  404 (405)
T TIGR03449       393 DGLLSSYRDALA  404 (405)
T ss_pred             HHHHHHHHHHhh
Confidence            999999998764

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional

Probab=100.00  E-value=2.5e-43  Score=321.39  Aligned_cols=278  Identities=19%  Similarity=0.210  Sum_probs=230.3

Q ss_pred             hhhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc------cchhhhccccccceeeeeccchhhHhhhh
Q 017085           54 TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY------FKLDYVKHLPLVAGAMIDSHVTAEYWKNR  127 (377)
Q Consensus        54 ~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~  127 (377)
                      +..+||+||+|....+.....+.....  ...+.+++.|+.....      +...+...++.+|.++++|....+.+.  
T Consensus       115 ~~~~~diihaH~~~~~~~~~~~~~~~~--~~~~~~~t~Hg~d~~~~~~~~~~~~~~~~~~~~ad~vv~~S~~~~~~l~--  190 (406)
T PRK15427        115 TPFVADVFIAHFGPAGVTAAKLRELGV--LRGKIATIFHGIDISSREVLNHYTPEYQQLFRRGDLMLPISDLWAGRLQ--  190 (406)
T ss_pred             ccCCCCEEEEcCChHHHHHHHHHHhCC--CCCCeEEEEcccccccchhhhhhhHHHHHHHHhCCEEEECCHHHHHHHH--
Confidence            456899999998766544433332111  1235677899753211      122345566889999999998887765  


Q ss_pred             hhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHh
Q 017085          128 TRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIK  207 (377)
Q Consensus       128 ~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~  207 (377)
                         .+|.+.+++.++|||+|.+.|.+....               .+.+.+.|+++||+.+.||++.++++++.+.+   
T Consensus       191 ---~~g~~~~ki~vi~nGvd~~~f~~~~~~---------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~---  249 (406)
T PRK15427        191 ---KMGCPPEKIAVSRMGVDMTRFSPRPVK---------------APATPLEIISVARLTEKKGLHVAIEACRQLKE---  249 (406)
T ss_pred             ---HcCCCHHHEEEcCCCCCHHHcCCCccc---------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHh---
Confidence               457778899999999999877532211               01456789999999999999999999997754   


Q ss_pred             hhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCC----CCCccchH
Q 017085          208 EKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQA----WGECFGRI  281 (377)
Q Consensus       208 ~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~----~~e~~~~~  281 (377)
                          +.++++++|+|+|     +..+++++.++++++.++|.|+|++  +++.++|+.||++++||..    ..||+|++
T Consensus       250 ----~~~~~~l~ivG~G-----~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~  320 (406)
T PRK15427        250 ----QGVAFRYRILGIG-----PWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVA  320 (406)
T ss_pred             ----hCCCEEEEEEECc-----hhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHH
Confidence                3478999999998     5788999999999999999999986  6899999999999999972    13999999


Q ss_pred             HHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 017085          282 TIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQEHHMAER  360 (377)
Q Consensus       282 ~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~f~~~~~~~~  360 (377)
                      ++|||++|+|||+|+.+|++|++.++.+|++++++|  +++++++|.++++ |++.+.+|++++++.+.++|+|+.++++
T Consensus       321 llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~d--~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~  398 (406)
T PRK15427        321 LMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEND--AQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRE  398 (406)
T ss_pred             HHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCCC--HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence            999999999999999999999999999999999988  9999999999999 9999999999999999999999999999


Q ss_pred             HHHHHHH
Q 017085          361 IAVVLKE  367 (377)
Q Consensus       361 ~~~~~~~  367 (377)
                      +.++|++
T Consensus       399 l~~~~~~  405 (406)
T PRK15427        399 LASLLQA  405 (406)
T ss_pred             HHHHHhh
Confidence            9999976

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.3e-42  Score=316.43  Aligned_cols=325  Identities=18%  Similarity=0.162  Sum_probs=246.1

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEc------------------cchhHHHhhhcccEEEE
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA------------------KGQETINTALKADLIVL   63 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~Div~~   63 (377)
                      +|+++|.++||+|+|+|...+....       ......|+.+...                  ..+..++.+.+||+||+
T Consensus        22 ~la~~L~~~G~~V~v~~~~~~~~~~-------~~~~~~~i~v~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~DiIh~   94 (398)
T cd03796          22 QLSQCLIKRGHKVVVITHAYGNRVG-------IRYLTNGLKVYYLPFVVFYNQSTLPTFFGTFPLLRNILIRERITIVHG   94 (398)
T ss_pred             HHHHHHHHcCCeeEEEeccCCcCCC-------cccccCceeEEEecceeccCCccccchhhhHHHHHHHHHhcCCCEEEE
Confidence            6899999999999999965332110       0011122222111                  12234445689999999


Q ss_pred             cCchhhhHHHHHhhcCCCccccceeEEeeeecccc------cchhhhccccccceeeeeccchhhHhhhhhhhhhhccCC
Q 017085           64 NTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMP  137 (377)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  137 (377)
                      |+.........+....  ....|++++.|+..+..      ........++.+|.++++|....+.+..    ..+++..
T Consensus        95 ~~~~~~~~~~~~~~~~--~~~~~~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----~~~~~~~  168 (398)
T cd03796          95 HQAFSALAHEALLHAR--TMGLKTVFTDHSLFGFADASSIHTNKLLRFSLADVDHVICVSHTSKENTVL----RASLDPE  168 (398)
T ss_pred             CCCCchHHHHHHHHhh--hcCCcEEEEecccccccchhhHHhhHHHHHhhccCCEEEEecHhHhhHHHH----HhCCChh
Confidence            9876443222222111  12257899999854211      1112223357889999999988765433    3456678


Q ss_pred             CeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeE
Q 017085          138 DTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVH  217 (377)
Q Consensus       138 ~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~  217 (377)
                      ++.+||||+|.+.|.+....               .+++.++++++||+.++||++.+++++..+.+       +.++++
T Consensus       169 k~~vi~ngvd~~~f~~~~~~---------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~-------~~~~~~  226 (398)
T cd03796         169 RVSVIPNAVDSSDFTPDPSK---------------RDNDKITIVVISRLVYRKGIDLLVGIIPEICK-------KHPNVR  226 (398)
T ss_pred             hEEEEcCccCHHHcCCCccc---------------CCCCceEEEEEeccchhcCHHHHHHHHHHHHh-------hCCCEE
Confidence            89999999998877543211               12567899999999999999999999987654       348999


Q ss_pred             EEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe
Q 017085          218 AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT  295 (377)
Q Consensus       218 l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s  295 (377)
                      |+|+|++     +..+.++++++++++.++|+|+|+.  +++.++|+.||++++||.  .|++|++++|||+||+|||+|
T Consensus       227 l~i~G~g-----~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~--~E~~g~~~~EAma~G~PVI~s  299 (398)
T cd03796         227 FIIGGDG-----PKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSL--TEAFCIAIVEAASCGLLVVST  299 (398)
T ss_pred             EEEEeCC-----chHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEeCCh--hhccCHHHHHHHHcCCCEEEC
Confidence            9999998     4678899999999999999999986  789999999999999999  899999999999999999999


Q ss_pred             CCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcc
Q 017085          296 AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKS  372 (377)
Q Consensus       296 ~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  372 (377)
                      +.|+.+|++.++ .+++++ .|  .++++++|.+++++......++.++++.+.++|||+.+++++.++|+++++..
T Consensus       300 ~~gg~~e~i~~~-~~~~~~-~~--~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~~~  372 (398)
T cd03796         300 RVGGIPEVLPPD-MILLAE-PD--VESIVRKLEEAISILRTGKHDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQTP  372 (398)
T ss_pred             CCCCchhheeCC-ceeecC-CC--HHHHHHHHHHHHhChhhhhhHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhcCC
Confidence            999999999765 444444 35  89999999999998776667888999999999999999999999999998654

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=6.1e-42  Score=311.78  Aligned_cols=337  Identities=20%  Similarity=0.224  Sum_probs=255.2

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhh-hhcccCceEEE--------ccchhHHHhhhcccEEEEcCchhhhHH
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEH-KMWDRGVQVIS--------AKGQETINTALKADLIVLNTAVAGKWL   72 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~~~~~~Div~~~~~~~~~~~   72 (377)
                      +|++.|.++||+|+|+|...+............ ...........        ...+..++++.+||+||+|...+..+.
T Consensus        20 ~la~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~divh~~~~~~~~~~   99 (371)
T cd04962          20 ELGKALARRGHEVHFITSSRPFRLDEYSPNIFFHEVEVPQYPLFQYPPYDLALASKIAEVAKRYKLDLLHVHYAVPHAVA   99 (371)
T ss_pred             HHHHHHHhcCCceEEEecCCCcchhhhccCeEEEEecccccchhhcchhHHHHHHHHHHHHhcCCccEEeecccCCccHH
Confidence            689999999999999996543111000000000 00000000000        122334456789999999975533222


Q ss_pred             HHHhhcCCCccccceeEEeeeeccc------ccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCC
Q 017085           73 DAVLKEDVPRVLPNVLWWIHEMRGH------YFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGN  146 (377)
Q Consensus        73 ~~~~~~~~~~~~~~~v~~~h~~~~~------~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi  146 (377)
                      ..+..........|++++.|+....      .+.......++.+|.+++.|....+.+.+    .+ ....++.++|||+
T Consensus       100 ~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----~~-~~~~~i~vi~n~~  174 (371)
T cd04962         100 AYLAREILGKKDLPVVTTLHGTDITLVGQDPSFQPATRFSIEKSDGVTAVSESLRQETYE----LF-DITKEIEVIPNFV  174 (371)
T ss_pred             HHHHHHhcCcCCCcEEEEEcCCccccccccccchHHHHHHHhhCCEEEEcCHHHHHHHHH----hc-CCcCCEEEecCCc
Confidence            2222111111235888899975321      11222334457899999999998887764    22 2456899999999


Q ss_pred             hhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCC
Q 017085          147 SKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMN  226 (377)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~  226 (377)
                      +...+.+..        ....+++++++++.++++++||+.+.||++.+++++..+.+       + .+++++++|.+. 
T Consensus       175 ~~~~~~~~~--------~~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~a~~~l~~-------~-~~~~l~i~G~g~-  237 (371)
T cd04962         175 DEDRFRPKP--------DEALKRRLGAPEGEKVLIHISNFRPVKRIDDVIRIFAKVRK-------E-VPARLLLVGDGP-  237 (371)
T ss_pred             CHhhcCCCc--------hHHHHHhcCCCCCCeEEEEecccccccCHHHHHHHHHHHHh-------c-CCceEEEEcCCc-
Confidence            987654322        23456778888889999999999999999999999987643       2 568999999983 


Q ss_pred             cccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceec
Q 017085          227 AQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN  306 (377)
Q Consensus       227 ~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~  306 (377)
                          ..+.+++.++++++.++|+|.|+.+++.++|+.||++++||.  .|++|++++|||++|+|||+|+.++..|++.+
T Consensus       238 ----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~v~ps~--~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~  311 (371)
T cd04962         238 ----ERSPAERLARELGLQDDVLFLGKQDHVEELLSIADLFLLPSE--KESFGLAALEAMACGVPVVASNAGGIPEVVKH  311 (371)
T ss_pred             ----CHHHHHHHHHHcCCCceEEEecCcccHHHHHHhcCEEEeCCC--cCCCccHHHHHHHcCCCEEEeCCCCchhhhcC
Confidence                467788888999998999999999999999999999999998  99999999999999999999999999999999


Q ss_pred             CcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 017085          307 GTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEV  368 (377)
Q Consensus       307 ~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~  368 (377)
                      +.+|++++++|  +++++++|.+++++++.+.+|++++++.+.++|+|+.+++++.++|+++
T Consensus       312 ~~~G~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~  371 (371)
T cd04962         312 GETGFLVDVGD--VEAMAEYALSLLEDDELWQEFSRAARNRAAERFDSERIVPQYEALYRRL  371 (371)
T ss_pred             CCceEEcCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence            99999999988  9999999999999999999999999999889999999999999999863

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain

Probab=100.00  E-value=3.1e-42  Score=318.40  Aligned_cols=344  Identities=15%  Similarity=0.146  Sum_probs=239.0

Q ss_pred             cHhhHHHhcCc--eEEEEEecCCCcc--hhHhhhhhhhhcccCceEEEcc---------------------chhHHHhh-
Q 017085            2 ELAFLLRGVGT--KVNWITIQKPSEE--DEVIYSLEHKMWDRGVQVISAK---------------------GQETINTA-   55 (377)
Q Consensus         2 ~la~~L~~~G~--eV~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~-   55 (377)
                      +|+++|.++||  +|+|+|...+...  ....  ....-...|++++...                     .+..++++ 
T Consensus        34 ~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~--~~~~~~~~gv~v~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  111 (439)
T TIGR02472        34 ELARALARRSEVEQVDLVTRLIKDAKVSPDYA--QPIERIAPGARIVRLPFGPRRYLRKELLWPYLDELADNLLQHLRQQ  111 (439)
T ss_pred             HHHHHHHhCCCCcEEEEEeccccCcCCCCccC--CCeeEeCCCcEEEEecCCCCCCcChhhhhhhHHHHHHHHHHHHHHc
Confidence            78999999997  9999995422110  0000  0001112455553321                     11223333 


Q ss_pred             -hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccc-------------h---------hhhccccccce
Q 017085           56 -LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK-------------L---------DYVKHLPLVAG  112 (377)
Q Consensus        56 -~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~-------------~---------~~~~~~~~~~~  112 (377)
                       .+||+||+|+..++.....+.. .   ...|++.+.|+.......             .         .....+..+|.
T Consensus       112 ~~~~DvIH~h~~~~~~~~~~~~~-~---~~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~  187 (439)
T TIGR02472       112 GHLPDLIHAHYADAGYVGARLSR-L---LGVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASL  187 (439)
T ss_pred             CCCCCEEEEcchhHHHHHHHHHH-H---hCCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCE
Confidence             2699999998654433332222 1   124789999975321100             0         01123467888


Q ss_pred             eeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchh
Q 017085          113 AMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQ  192 (377)
Q Consensus       113 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~  192 (377)
                      ++++|.....   +.+....+++++++.+||||+|.+.|.+......... ....++.++.+++.++|+++||+.+.||+
T Consensus       188 ii~~s~~~~~---~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~  263 (439)
T TIGR02472       188 VITSTHQEIE---EQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSE-IDNLLAPFLKDPEKPPILAISRPDRRKNI  263 (439)
T ss_pred             EEECCHHHHH---HHHHhccCCCccceEEECCCcChhhcCCCCccccchh-HHHHHHhhccccCCcEEEEEcCCcccCCH
Confidence            8887753221   1111123577889999999999988765322111111 11222345566677899999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcc------cHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhc
Q 017085          193 DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ------TKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAI  264 (377)
Q Consensus       193 ~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~------~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~a  264 (377)
                      +.+++|++.+.. +++    .+++. +++|+++...      ..+.+++..++.++++.++|+|+|+.  +++.++|+.|
T Consensus       264 ~~li~A~~~l~~-~~~----~~~l~-li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a  337 (439)
T TIGR02472       264 PSLVEAYGRSPK-LQE----MANLV-LVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLA  337 (439)
T ss_pred             HHHHHHHHhChh-hhh----hccEE-EEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHH
Confidence            999999986421 211    13332 3567764321      01234566778889999999999974  7899999987


Q ss_pred             ----CEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHH
Q 017085          265 ----DVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTM  340 (377)
Q Consensus       265 ----dv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~  340 (377)
                          |++++||.  .|+||++++|||+||+|||+|+.||+.|++.++.+|++++++|  +++|+++|.++++|++.+.++
T Consensus       338 ~~~~Dv~v~pS~--~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d--~~~la~~i~~ll~~~~~~~~~  413 (439)
T TIGR02472       338 ARSRGIFVNPAL--TEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLD--LEAIASALEDALSDSSQWQLW  413 (439)
T ss_pred             hhcCCEEecccc--cCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCC--HHHHHHHHHHHHhCHHHHHHH
Confidence                99999999  9999999999999999999999999999999999999999998  999999999999999999999


Q ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHH
Q 017085          341 GKRGYERVKEIFQEHHMAERIAVVL  365 (377)
Q Consensus       341 ~~~~~~~~~~~f~~~~~~~~~~~~~  365 (377)
                      ++++++.+.++|||+.+++++.+++
T Consensus       414 ~~~a~~~~~~~fsw~~~~~~~~~l~  438 (439)
T TIGR02472       414 SRNGIEGVRRHYSWDAHVEKYLRIL  438 (439)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHh
Confidence            9999999999999999999999876

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.

>PRK10307 putative glycosyl transferase; Provisional

Probab=100.00  E-value=7.2e-42  Score=314.90  Aligned_cols=338  Identities=14%  Similarity=0.097  Sum_probs=252.0

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhh----hhhhhcccCceEEEccc--------h--------------hHHHh-
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYS----LEHKMWDRGVQVISAKG--------Q--------------ETINT-   54 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--------~--------------~~~~~-   54 (377)
                      +|+++|.++||+|+|+|.....+.......    ........|+++...+.        +              ..+.+ 
T Consensus        23 ~l~~~L~~~G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (412)
T PRK10307         23 EMAEWLAARGHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVPKQPSGLKRLLHLGSFALSSFFPLLAQ  102 (412)
T ss_pred             HHHHHHHHCCCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCCCCccHHHHHHHHHHHHHHHHHHHhhc
Confidence            689999999999999996532111100000    00011123555533211        0              01112 


Q ss_pred             -hhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc------cc---------hhhhccccccceeeeecc
Q 017085           55 -ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY------FK---------LDYVKHLPLVAGAMIDSH  118 (377)
Q Consensus        55 -~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~------~~---------~~~~~~~~~~~~~~~~s~  118 (377)
                       ..+||+||+|.+..............  ...|+++++|+.+...      ..         ......++.+|.+++.|.
T Consensus       103 ~~~~~Div~~~~p~~~~~~~~~~~~~~--~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~  180 (412)
T PRK10307        103 RRWRPDRVIGVVPTLFCAPGARLLARL--SGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISR  180 (412)
T ss_pred             cCCCCCEEEEeCCcHHHHHHHHHHHHh--hCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCH
Confidence             16899999997643211111111111  1246788888754211      10         112234568999999999


Q ss_pred             chhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHH
Q 017085          119 VTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHS  198 (377)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a  198 (377)
                      ...+.+.     ..+.+..++.+||||+|.+.+.+...     ..+..++++++++++.++++|+|++.+.||++.+++|
T Consensus       181 ~~~~~~~-----~~~~~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~kg~~~li~a  250 (412)
T PRK10307        181 SMMNKAR-----EKGVAAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEKQGLELVIDA  250 (412)
T ss_pred             HHHHHHH-----HcCCCcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCccccccCHHHHHHH
Confidence            9988875     34667788999999999887654321     1134578889998888999999999999999999999


Q ss_pred             HHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCC
Q 017085          199 FYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGE  276 (377)
Q Consensus       199 ~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e  276 (377)
                      ++.+.        +.++++|+|+|+|     +..+++++++++++++ +|+|+|++  +++.++|+.||++++||.  .|
T Consensus       251 ~~~l~--------~~~~~~l~ivG~g-----~~~~~l~~~~~~~~l~-~v~f~G~~~~~~~~~~~~~aDi~v~ps~--~e  314 (412)
T PRK10307        251 ARRLR--------DRPDLIFVICGQG-----GGKARLEKMAQCRGLP-NVHFLPLQPYDRLPALLKMADCHLLPQK--AG  314 (412)
T ss_pred             HHHhc--------cCCCeEEEEECCC-----hhHHHHHHHHHHcCCC-ceEEeCCCCHHHHHHHHHhcCEeEEeec--cC
Confidence            98652        2378999999998     4678899999999986 79999986  689999999999999998  77


Q ss_pred             c----cchHHHHHHHcCCcEEEeCCCC--cccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 017085          277 C----FGRITIEAMAFQLPVLGTAAGG--TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKE  350 (377)
Q Consensus       277 ~----~~~~~~Ea~a~g~PvI~s~~~~--~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~  350 (377)
                      +    +|.+++|||+||+|||+|+.+|  ..+++.  ++|++++++|  +++++++|.++++|++.+.+|++++++.+.+
T Consensus       315 ~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d--~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~  390 (412)
T PRK10307        315 AADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPES--VEALVAAIAALARQALLRPKLGTVAREYAER  390 (412)
T ss_pred             cccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence            7    6888999999999999999876  457775  5999999988  9999999999999999999999999999999


Q ss_pred             hcCHHHHHHHHHHHHHHHHhc
Q 017085          351 IFQEHHMAERIAVVLKEVLKK  371 (377)
Q Consensus       351 ~f~~~~~~~~~~~~~~~~~~~  371 (377)
                      +|||+.+++++.++|++++.+
T Consensus       391 ~fs~~~~~~~~~~~~~~~~~~  411 (412)
T PRK10307        391 TLDKENVLRQFIADIRGLVAE  411 (412)
T ss_pred             HcCHHHHHHHHHHHHHHHhcC
Confidence            999999999999999998865

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

Probab=100.00  E-value=6.7e-42  Score=318.69  Aligned_cols=332  Identities=17%  Similarity=0.155  Sum_probs=246.0

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcch-hHhhhhhhh---hccc-Cce--EEEccchhHHHhhhcccEEEEcCchhhhHHHH
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEED-EVIYSLEHK---MWDR-GVQ--VISAKGQETINTALKADLIVLNTAVAGKWLDA   74 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~-~~~~~~~~~---~~~~-~~~--~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~   74 (377)
                      +|+++|.++||+|+++|...+.... .........   .... ...  +........++++.+||+||+|++....+...
T Consensus        82 ~l~~~L~~~G~eV~vlt~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~  161 (465)
T PLN02871         82 NFIRYLREMGDEVLVVTTDEGVPQEFHGAKVIGSWSFPCPFYQKVPLSLALSPRIISEVARFKPDLIHASSPGIMVFGAL  161 (465)
T ss_pred             HHHHHHHHCCCeEEEEecCCCCCccccCceeeccCCcCCccCCCceeeccCCHHHHHHHHhCCCCEEEECCCchhHHHHH
Confidence            6899999999999999976432111 000000000   0000 000  00111344566778999999998653333222


Q ss_pred             HhhcCCCccccceeEEeeeecccccc--------h----hhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEE
Q 017085           75 VLKEDVPRVLPNVLWWIHEMRGHYFK--------L----DYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVV  142 (377)
Q Consensus        75 ~~~~~~~~~~~~~v~~~h~~~~~~~~--------~----~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi  142 (377)
                      ....   ....|++.+.|+....+..        .    ......+.+|.++++|....+.+.+    ....+.+++.++
T Consensus       162 ~~ak---~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~----~~~~~~~kv~vi  234 (465)
T PLN02871        162 FYAK---LLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKELEA----AGVTAANRIRVW  234 (465)
T ss_pred             HHHH---HhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHH----cCCCCcCeEEEe
Confidence            2111   1124788888875432211        0    0122346789999999998887764    222356789999


Q ss_pred             EcCChhhhHHHhhhhhhhhhhHHHHHHHhC-CCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEE
Q 017085          143 HLGNSKELMEVAEDNVAKRVLREHVRESLG-VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII  221 (377)
Q Consensus       143 ~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~  221 (377)
                      |||+|.+.|.+...       ....++++. .+++.++|+|+||+.+.||++.++++++.+           ++++|+|+
T Consensus       235 ~nGvd~~~f~p~~~-------~~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~li~a~~~~-----------~~~~l~iv  296 (465)
T PLN02871        235 NKGVDSESFHPRFR-------SEEMRARLSGGEPEKPLIVYVGRLGAEKNLDFLKRVMERL-----------PGARLAFV  296 (465)
T ss_pred             CCccCccccCCccc-------cHHHHHHhcCCCCCCeEEEEeCCCchhhhHHHHHHHHHhC-----------CCcEEEEE
Confidence            99999987754321       123454443 335678899999999999999999988743           78999999


Q ss_pred             ecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC
Q 017085          222 GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG  299 (377)
Q Consensus       222 G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~  299 (377)
                      |+|     ++.+.++++++.    .+|+|+|++  +++.++|+.||++|+||.  .|++|++++|||+||+|||+++.+|
T Consensus       297 G~G-----~~~~~l~~~~~~----~~V~f~G~v~~~ev~~~~~~aDv~V~pS~--~E~~g~~vlEAmA~G~PVI~s~~gg  365 (465)
T PLN02871        297 GDG-----PYREELEKMFAG----TPTVFTGMLQGDELSQAYASGDVFVMPSE--SETLGFVVLEAMASGVPVVAARAGG  365 (465)
T ss_pred             eCC-----hHHHHHHHHhcc----CCeEEeccCCHHHHHHHHHHCCEEEECCc--ccccCcHHHHHHHcCCCEEEcCCCC
Confidence            998     567778877764    379999997  789999999999999999  9999999999999999999999999


Q ss_pred             cccceec---CcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHhcc
Q 017085          300 TTEIVVN---GTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAV-VLKEVLKKS  372 (377)
Q Consensus       300 ~~e~~~~---~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~-~~~~~~~~~  372 (377)
                      +.|++.+   +.+|++++++|  +++++++|.++++|++.+.+|++++++.+ ++|+|+.+++++.+ .|++++...
T Consensus       366 ~~eiv~~~~~~~~G~lv~~~d--~~~la~~i~~ll~~~~~~~~~~~~a~~~~-~~fsw~~~a~~l~~~~Y~~~~~~~  439 (465)
T PLN02871        366 IPDIIPPDQEGKTGFLYTPGD--VDDCVEKLETLLADPELRERMGAAAREEV-EKWDWRAATRKLRNEQYSAAIWFW  439 (465)
T ss_pred             cHhhhhcCCCCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999998   89999999988  99999999999999999999999999987 57999999999998 799887643

>PLN02316 synthase/transferase

Probab=100.00  E-value=6.3e-41  Score=323.30  Aligned_cols=293  Identities=16%  Similarity=0.153  Sum_probs=229.5

Q ss_pred             hcccEEEEcCchhhhHHHHHhhc-C-CCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhh
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKE-D-VPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLR  133 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~-~-~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~  133 (377)
                      .+|||||+|+-.++.....+... . .....+|+|.++|+..  +........+..+|.++++|...++.+..    ...
T Consensus       708 ~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~--~~~n~lk~~l~~AD~ViTVS~tya~EI~~----~~~  781 (1036)
T PLN02316        708 FHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE--FGANHIGKAMAYADKATTVSPTYSREVSG----NSA  781 (1036)
T ss_pred             CCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc--cchhHHHHHHHHCCEEEeCCHHHHHHHHh----ccC
Confidence            48999999975444333222211 0 0112358999999763  22222344567899999999998877654    222


Q ss_pred             c--cCCCeEEEEcCChhhhHHHhhhh------------hhhhhhHHHHHHHhCCCC-CCeEEEEeccccccchhHHHHHH
Q 017085          134 I--KMPDTYVVHLGNSKELMEVAEDN------------VAKRVLREHVRESLGVRN-EDLLFAIINSVSRGKGQDLFLHS  198 (377)
Q Consensus       134 ~--~~~~~~vi~ngi~~~~~~~~~~~------------~~~~~~~~~~r~~~~~~~-~~~~i~~~G~~~~~Kg~~~ll~a  198 (377)
                      +  ...++.+|+||||.+.|.+....            ..+...+..+++++|++. +.++|+++||+.++||++.|++|
T Consensus       782 l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~A  861 (1036)
T PLN02316        782 IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHA  861 (1036)
T ss_pred             cccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHH
Confidence            2  24789999999999877654221            112234667899999984 67899999999999999999999


Q ss_pred             HHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCC--CCcEEEecCcCC-H-HHHHHhcCEEEecCCCC
Q 017085          199 FYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI--QDRVHFVNKTLT-V-APYLAAIDVLVQNSQAW  274 (377)
Q Consensus       199 ~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~--~~~v~~~g~~~~-~-~~~~~~adv~l~ps~~~  274 (377)
                      +..+.+         .+++|+|+|+|+..  .+.+.++++++++++  +++|.|.+..++ + ..+|++||++|+||.  
T Consensus       862 l~~ll~---------~~~qlVIvG~Gpd~--~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~--  928 (1036)
T PLN02316        862 IWRTLE---------RNGQVVLLGSAPDP--RIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSI--  928 (1036)
T ss_pred             HHHHhh---------cCcEEEEEeCCCCH--HHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCc--
Confidence            998754         57999999998532  357888999998865  678999887644 3 379999999999999  


Q ss_pred             CCccchHHHHHHHcCCcEEEeCCCCcccceecC-------------cceeeecCCCCChhHHHHHHHHHhhC-HHHHHHH
Q 017085          275 GECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG-------------TTGLLHPVGKEGITPLAKNIVKLATH-VERRLTM  340 (377)
Q Consensus       275 ~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~-------------~~g~~~~~~~~~~~~la~~i~~l~~~-~~~~~~~  340 (377)
                      .|+||++++|||+||+|+|++++||+++.|.++             .+|+++++.+  +++|+.+|.+++++ ++....+
T Consensus       929 ~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d--~~aLa~AL~raL~~~~~~~~~~ 1006 (1036)
T PLN02316        929 FEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGAD--AAGVDYALNRAISAWYDGRDWF 1006 (1036)
T ss_pred             ccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCC--HHHHHHHHHHHHhhhhhhHHHH
Confidence            999999999999999999999999999999874             5899999998  99999999999986 4555667


Q ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 017085          341 GKRGYERVKEIFQEHHMAERIAVVLKEVL  369 (377)
Q Consensus       341 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  369 (377)
                      +..+++.+.+.|||+.++++|+++|+++.
T Consensus      1007 ~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316       1007 NSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred             HHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence            88888888889999999999999999875

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=6.1e-41  Score=303.41  Aligned_cols=323  Identities=21%  Similarity=0.266  Sum_probs=252.6

Q ss_pred             CcHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEc--------------cchhHHHhhhcccEEEEcCc
Q 017085            1 MELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--------------KGQETINTALKADLIVLNTA   66 (377)
Q Consensus         1 ~~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~Div~~~~~   66 (377)
                      ++|+++|.++||+|++++......         ..+...|++++..              .....++++.+||+||+|+.
T Consensus        17 ~~l~~~L~~~g~~v~v~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dii~~~~~   87 (355)
T cd03819          17 LELARALVERGHRSLVASAGGRLV---------AELEAEGSRHIKLPFISKNPLRILLNVARLRRLIREEKVDIVHARSR   87 (355)
T ss_pred             HHHHHHHHHcCCEEEEEcCCCchH---------HHHHhcCCeEEEccccccchhhhHHHHHHHHHHHHHcCCCEEEECCC
Confidence            368999999999999998654211         1112223332211              12334456789999999986


Q ss_pred             hhhhHHHHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCC
Q 017085           67 VAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGN  146 (377)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi  146 (377)
                      .+.+....+..    ....|++++.|+......  .+...+..+|.+++.|....+.+.+    .++++.+++.++|||+
T Consensus        88 ~~~~~~~~~~~----~~~~~~i~~~h~~~~~~~--~~~~~~~~~~~vi~~s~~~~~~~~~----~~~~~~~k~~~i~ngi  157 (355)
T cd03819          88 APAWSAYLAAR----RTRPPFVTTVHGFYSVNF--RYNAIMARGDRVIAVSNFIADHIRE----NYGVDPDRIRVIPRGV  157 (355)
T ss_pred             chhHHHHHHHH----hcCCCEEEEeCCchhhHH--HHHHHHHhcCEEEEeCHHHHHHHHH----hcCCChhhEEEecCCc
Confidence            54433222221    113688999998753321  3445567899999999998888764    6777888999999999


Q ss_pred             hhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCC
Q 017085          147 SKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMN  226 (377)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~  226 (377)
                      |...+.+....   ......+|++++.+++.++++++||+.+.||++.+++++..+.+       +.++++++|+|.+..
T Consensus       158 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~-------~~~~~~l~ivG~~~~  227 (355)
T cd03819         158 DLDRFDPGAVP---PERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKK-------DDPDVHLLIVGDAQG  227 (355)
T ss_pred             cccccCccccc---hHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHh-------cCCCeEEEEEECCcc
Confidence            98876543211   11123367888888889999999999999999999999997755       337899999999854


Q ss_pred             cccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecC-CCCCCccchHHHHHHHcCCcEEEeCCCCccccee
Q 017085          227 AQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNS-QAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVV  305 (377)
Q Consensus       227 ~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps-~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~  305 (377)
                      .. .+.+.+.+.++++++.++|.|+|+.+++.++|+.||++++|| .  .|++|++++|||++|+|||+++.++..|++.
T Consensus       228 ~~-~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l~~ad~~i~ps~~--~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i~  304 (355)
T cd03819         228 RR-FYYAELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVSASTE--PEAFGRTAVEAQAMGRPVIASDHGGARETVR  304 (355)
T ss_pred             cc-hHHHHHHHHHHHcCCcceEEEcCCcccHHHHHHhCCEEEecCCC--CCCCchHHHHHHhcCCCEEEcCCCCcHHHHh
Confidence            33 356777788889999889999999999999999999999999 6  8999999999999999999999999999999


Q ss_pred             cCcceeeecCCCCChhHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHH
Q 017085          306 NGTTGLLHPVGKEGITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQEHHM  357 (377)
Q Consensus       306 ~~~~g~~~~~~~~~~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~f~~~~~  357 (377)
                      ++.+|++++++|  +++++++|..++. +++.+.+++++|++.+.++|+|+.+
T Consensus       305 ~~~~g~~~~~~~--~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~~  355 (355)
T cd03819         305 PGETGLLVPPGD--AEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDRM  355 (355)
T ss_pred             CCCceEEeCCCC--HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhccC
Confidence            988999999888  9999999975554 8999999999999999999999864

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.

>PRK00654 glgA glycogen synthase; Provisional

Probab=100.00  E-value=8.8e-41  Score=310.57  Aligned_cols=294  Identities=16%  Similarity=0.163  Sum_probs=224.5

Q ss_pred             hcccEEEEcCchhhhHHHHHhhc-CCCccccceeEEeeeeccc-ccc----------------hh---------hhcccc
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKE-DVPRVLPNVLWWIHEMRGH-YFK----------------LD---------YVKHLP  108 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~h~~~~~-~~~----------------~~---------~~~~~~  108 (377)
                      .+|||||+|...++.....+... ......+|++.|+|+.... .+.                ..         ....+.
T Consensus       117 ~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (466)
T PRK00654        117 PRPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLY  196 (466)
T ss_pred             CCCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHH
Confidence            48999999986555433333221 1111136899999986421 010                00         011246


Q ss_pred             ccceeeeeccchhhHhhhhh-----hhhhhccCCCeEEEEcCChhhhHHHhhhh-----------hhhhhhHHHHHHHhC
Q 017085          109 LVAGAMIDSHVTAEYWKNRT-----RERLRIKMPDTYVVHLGNSKELMEVAEDN-----------VAKRVLREHVRESLG  172 (377)
Q Consensus       109 ~~~~~~~~s~~~~~~~~~~~-----~~~~~~~~~~~~vi~ngi~~~~~~~~~~~-----------~~~~~~~~~~r~~~~  172 (377)
                      .+|.++++|...++.+....     ...++.+..++.+|+||+|.+.|.+....           ..+...+..+++++|
T Consensus       197 ~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~g  276 (466)
T PRK00654        197 YADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFG  276 (466)
T ss_pred             hcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhC
Confidence            78999999999887765421     11233456789999999999987653221           012234567899999


Q ss_pred             CCC-CCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEE-E
Q 017085          173 VRN-EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH-F  250 (377)
Q Consensus       173 ~~~-~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~-~  250 (377)
                      +++ +.++|+++||+.++||++.+++|+.++.+         .+++|+|+|+|.+   .+.+.+++++++++.  ++. +
T Consensus       277 l~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~---------~~~~lvivG~g~~---~~~~~l~~l~~~~~~--~v~~~  342 (466)
T PRK00654        277 LPDDDAPLFAMVSRLTEQKGLDLVLEALPELLE---------QGGQLVLLGTGDP---ELEEAFRALAARYPG--KVGVQ  342 (466)
T ss_pred             CCCCCCcEEEEeeccccccChHHHHHHHHHHHh---------cCCEEEEEecCcH---HHHHHHHHHHHHCCC--cEEEE
Confidence            985 67899999999999999999999998754         5799999998742   356788888888863  455 4


Q ss_pred             ecCcCC-HHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecC------cceeeecCCCCChhHH
Q 017085          251 VNKTLT-VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG------TTGLLHPVGKEGITPL  323 (377)
Q Consensus       251 ~g~~~~-~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~------~~g~~~~~~~~~~~~l  323 (377)
                      .|+.++ +..+|++||++++||.  +|+||++++|||+||+|+|++++||+.|++.++      .+|++++++|  +++|
T Consensus       343 ~g~~~~~~~~~~~~aDv~v~PS~--~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d--~~~l  418 (466)
T PRK00654        343 IGYDEALAHRIYAGADMFLMPSR--FEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFN--AEDL  418 (466)
T ss_pred             EeCCHHHHHHHHhhCCEEEeCCC--CCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCC--HHHH
Confidence            666544 5689999999999999  999999999999999999999999999999887      8999999988  9999


Q ss_pred             HHHHHHHhh---CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Q 017085          324 AKNIVKLAT---HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK  370 (377)
Q Consensus       324 a~~i~~l~~---~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  370 (377)
                      +++|.++++   +++.+.+++.++.+   ++|||+.+++++.++|+++++
T Consensus       419 a~~i~~~l~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~lY~~~~~  465 (466)
T PRK00654        419 LRALRRALELYRQPPLWRALQRQAMA---QDFSWDKSAEEYLELYRRLLG  465 (466)
T ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHHHHhh
Confidence            999999876   67777888877753   679999999999999999875

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=100.00  E-value=2.4e-40  Score=313.04  Aligned_cols=288  Identities=14%  Similarity=0.134  Sum_probs=219.9

Q ss_pred             hHHHhhhcccEEEEcCchhhhHHHHHhhcCCCccccceeE-Eeeeecccccchh----hh---ccccccc--eeeeeccc
Q 017085           50 ETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLW-WIHEMRGHYFKLD----YV---KHLPLVA--GAMIDSHV  119 (377)
Q Consensus        50 ~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~h~~~~~~~~~~----~~---~~~~~~~--~~~~~s~~  119 (377)
                      ..++++.+|||||+|...+..+...+....    ..|+++ +.|..........    +.   ..+..++  .++++|..
T Consensus       393 ~~~lk~~kpDIVH~h~~~a~~lg~lAa~~~----gvPvIv~t~h~~~~~~~~~~~~~~~~~l~~~l~~~~~~i~Vs~S~~  468 (694)
T PRK15179        393 TDVMRSSVPSVVHIWQDGSIFACALAALLA----GVPRIVLSVRTMPPVDRPDRYRVEYDIIYSELLKMRGVALSSNSQF  468 (694)
T ss_pred             HHHHHHcCCcEEEEeCCcHHHHHHHHHHHc----CCCEEEEEeCCCccccchhHHHHHHHHHHHHHHhcCCeEEEeCcHH
Confidence            455677899999999877654433332211    124444 5565422211111    11   1122233  34444555


Q ss_pred             hhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHH--hCCCCCCeEEEEeccccccchhHHHHH
Q 017085          120 TAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRES--LGVRNEDLLFAIINSVSRGKGQDLFLH  197 (377)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~--~~~~~~~~~i~~~G~~~~~Kg~~~ll~  197 (377)
                      ..+.+.+    .++++.+++.|||||+|...|.+.+..       ...+..  ...+++.++|+++||+.+.||++.+++
T Consensus       469 ~~~~l~~----~~g~~~~kI~VI~NGVd~~~f~~~~~~-------~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~  537 (694)
T PRK15179        469 AAHRYAD----WLGVDERRIPVVYNGLAPLKSVQDDAC-------TAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVE  537 (694)
T ss_pred             HHHHHHH----HcCCChhHEEEECCCcCHHhcCCCchh-------hHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHH
Confidence            5444443    577888899999999998776432211       011111  223456789999999999999999999


Q ss_pred             HHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCc
Q 017085          198 SFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGEC  277 (377)
Q Consensus       198 a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~  277 (377)
                      ++.++.+       +.++++|+|+|+|     +..+.++++++++++.++|+|+|+++++..+|+.||++++||.  +|+
T Consensus       538 A~a~l~~-------~~p~~~LvIvG~G-----~~~~~L~~l~~~lgL~~~V~flG~~~dv~~ll~aaDv~VlpS~--~Eg  603 (694)
T PRK15179        538 AAQRFAA-------SHPKVRFIMVGGG-----PLLESVREFAQRLGMGERILFTGLSRRVGYWLTQFNAFLLLSR--FEG  603 (694)
T ss_pred             HHHHHHH-------HCcCeEEEEEccC-----cchHHHHHHHHHcCCCCcEEEcCCcchHHHHHHhcCEEEeccc--ccc
Confidence            9998765       4488999999998     4678899999999999999999999999999999999999999  999


Q ss_pred             cchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHH
Q 017085          278 FGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHM  357 (377)
Q Consensus       278 ~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~  357 (377)
                      ||++++|||+||+|||+|+.+|..|++.++.+|++++++|.+.++|+++|.+++.+......+++++++++.++|||+.+
T Consensus       604 fp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~  683 (694)
T PRK15179        604 LPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAADPGIARKAADWASARFSLNQM  683 (694)
T ss_pred             chHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHH
Confidence            99999999999999999999999999999999999998774457999999998887666678889999999999999999


Q ss_pred             HHHHHHHHH
Q 017085          358 AERIAVVLK  366 (377)
Q Consensus       358 ~~~~~~~~~  366 (377)
                      ++++.++|+
T Consensus       684 ~~~~~~lY~  692 (694)
T PRK15179        684 IASTVRCYQ  692 (694)
T ss_pred             HHHHHHHhC
Confidence            999999995

>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=100.00  E-value=3.9e-40  Score=297.81  Aligned_cols=289  Identities=18%  Similarity=0.223  Sum_probs=220.1

Q ss_pred             chhHHHhhhcccEEEEcCchhhhHHHHHh-hcCCCccccceeEEeeeecccccch----hhh------ccccccceeeee
Q 017085           48 GQETINTALKADLIVLNTAVAGKWLDAVL-KEDVPRVLPNVLWWIHEMRGHYFKL----DYV------KHLPLVAGAMID  116 (377)
Q Consensus        48 ~~~~~~~~~~~Div~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~h~~~~~~~~~----~~~------~~~~~~~~~~~~  116 (377)
                      .+..+++..+||+||+|...+..+...+. ..+.    +.++.+.|.........    .+.      ......+ +++.
T Consensus       271 ~l~~~ir~~rpDIVHt~~~~a~l~g~laA~lagv----pviv~~~h~~~~~~~~r~~~~e~~~~~~a~~i~~~sd-~v~~  345 (578)
T PRK15490        271 HLVPHLCERKLDYLSVWQDGACLMIALAALIAGV----PRIQLGLRGLPPVVRKRLFKPEYEPLYQALAVVPGVD-FMSN  345 (578)
T ss_pred             HHHHHHHHcCCCEEEEcCcccHHHHHHHHHhcCC----CEEEEeecccCCcchhhHHHHHHHHhhhhceeEecch-hhhc
Confidence            34566688999999999866543322222 2222    23344556532211111    110      1122233 5556


Q ss_pred             ccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHH--HhCCCCCCeEEEEeccccccchhHH
Q 017085          117 SHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRE--SLGVRNEDLLFAIINSVSRGKGQDL  194 (377)
Q Consensus       117 s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~--~~~~~~~~~~i~~~G~~~~~Kg~~~  194 (377)
                      +..+++.+.+    .++++++++.+||||+|...|.+....      ....++  ..+++++.++++++||+.+.||+..
T Consensus       346 s~~v~~~l~~----~lgip~~KI~VIyNGVD~~rf~p~~~~------~~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~  415 (578)
T PRK15490        346 NHCVTRHYAD----WLKLEAKHFQVVYNGVLPPSTEPSSEV------PHKIWQQFTQKTQDADTTIGGVFRFVGDKNPFA  415 (578)
T ss_pred             cHHHHHHHHH----HhCCCHHHEEEEeCCcchhhcCccchh------hHHHHHHhhhccCCCCcEEEEEEEEehhcCHHH
Confidence            6655555544    667899999999999999876553211      112233  2345566788999999999999999


Q ss_pred             HHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCC
Q 017085          195 FLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAW  274 (377)
Q Consensus       195 ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~  274 (377)
                      +++++.++.+       +.++++|+|+|+|     +..++++++++++++.++|+|+|+.+++..+|+.+|++++||.  
T Consensus       416 LI~A~a~llk-------~~pdirLvIVGdG-----~~~eeLk~la~elgL~d~V~FlG~~~Dv~~~LaaADVfVlPS~--  481 (578)
T PRK15490        416 WIDFAARYLQ-------HHPATRFVLVGDG-----DLRAEAQKRAEQLGILERILFVGASRDVGYWLQKMNVFILFSR--  481 (578)
T ss_pred             HHHHHHHHHh-------HCCCeEEEEEeCc-----hhHHHHHHHHHHcCCCCcEEECCChhhHHHHHHhCCEEEEccc--
Confidence            9999987654       3489999999998     5778999999999999999999999999999999999999999  


Q ss_pred             CCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHH---HHHhhCHHHHHHHHHHHHHHHHHh
Q 017085          275 GECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNI---VKLATHVERRLTMGKRGYERVKEI  351 (377)
Q Consensus       275 ~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i---~~l~~~~~~~~~~~~~~~~~~~~~  351 (377)
                      +||||++++|||++|+|||+|+.||.+|++.++.+|++++++|  ++++++++   ..+.+..+....+++++++++.++
T Consensus       482 ~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D--~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~  559 (578)
T PRK15490        482 YEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQ--TVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQER  559 (578)
T ss_pred             ccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCC--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999999999999988  88888876   344555555667899999999999


Q ss_pred             cCHHHHHHHHHHHHHH
Q 017085          352 FQEHHMAERIAVVLKE  367 (377)
Q Consensus       352 f~~~~~~~~~~~~~~~  367 (377)
                      |||+.++++|.++|..
T Consensus       560 FS~e~Mv~~y~ki~~~  575 (578)
T PRK15490        560 FTVEHMVGTFVKTIAS  575 (578)
T ss_pred             CCHHHHHHHHHHHHHh
Confidence            9999999999999975

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

Probab=100.00  E-value=1.4e-39  Score=295.07  Aligned_cols=275  Identities=19%  Similarity=0.297  Sum_probs=220.7

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhcc
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIK  135 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~  135 (377)
                      .++|+||+|+.....   ..+....+  ..+++.+.|+...    .   ..+...+.++++|....+++.+.      .+
T Consensus        98 ~~~~vi~v~~~~~~~---~~~~~~~~--~~~~v~~~h~~~~----~---~~~~~~~~ii~~S~~~~~~~~~~------~~  159 (380)
T PRK15484         98 TKDSVIVIHNSMKLY---RQIRERAP--QAKLVMHMHNAFE----P---ELLDKNAKIIVPSQFLKKFYEER------LP  159 (380)
T ss_pred             CCCcEEEEeCcHHhH---HHHHhhCC--CCCEEEEEecccC----h---hHhccCCEEEEcCHHHHHHHHhh------CC
Confidence            569999999854221   11122222  2478888886521    1   12346789999999888877642      35


Q ss_pred             CCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCC
Q 017085          136 MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPS  215 (377)
Q Consensus       136 ~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~  215 (377)
                      ..++.+||||+|...+.+..        +...++.++++++..+++|+||+.+.||++.+++|+..+.+       +.++
T Consensus       160 ~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~~l~~-------~~p~  224 (380)
T PRK15484        160 NADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFEKLAT-------AHSN  224 (380)
T ss_pred             CCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHHHHHH-------hCCC
Confidence            57899999999987765322        23467788888888999999999999999999999997754       4489


Q ss_pred             eEEEEEecCCCc----ccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcC
Q 017085          216 VHAVIIGSDMNA----QTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQ  289 (377)
Q Consensus       216 ~~l~i~G~~~~~----~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g  289 (377)
                      ++|+|+|++...    ...+.+.+++.+++++  .+++|+|+.  +++.++|+.||++++||. +.|+||++++|||+||
T Consensus       225 ~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~~~~~~aDv~v~pS~-~~E~f~~~~lEAma~G  301 (380)
T PRK15484        225 LKLVVVGDPTASSKGEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMHNYYPLADLVVVPSQ-VEEAFCMVAVEAMAAG  301 (380)
T ss_pred             eEEEEEeCCccccccchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHHHHHHhCCEEEeCCC-CccccccHHHHHHHcC
Confidence            999999987532    1235566777777765  579999986  689999999999999997 2499999999999999


Q ss_pred             CcEEEeCCCCcccceecCccee-eecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 017085          290 LPVLGTAAGGTTEIVVNGTTGL-LHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEV  368 (377)
Q Consensus       290 ~PvI~s~~~~~~e~~~~~~~g~-~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~  368 (377)
                      +|||+|+.||++|++.++.+|+ ++++.|  +++++++|.++++|++. .++++++++.+.++|+|+.++++++++|+..
T Consensus       302 ~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d--~~~la~~I~~ll~d~~~-~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~  378 (380)
T PRK15484        302 KPVLASTKGGITEFVLEGITGYHLAEPMT--SDSIISDINRTLADPEL-TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNW  378 (380)
T ss_pred             CCEEEeCCCCcHhhcccCCceEEEeCCCC--HHHHHHHHHHHHcCHHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence            9999999999999999999999 556777  99999999999999985 7899999999999999999999999999876


Q ss_pred             H
Q 017085          369 L  369 (377)
Q Consensus       369 ~  369 (377)
                      .
T Consensus       379 ~  379 (380)
T PRK15484        379 F  379 (380)
T ss_pred             c
Confidence            4

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

Probab=100.00  E-value=5.4e-40  Score=298.49  Aligned_cols=334  Identities=19%  Similarity=0.192  Sum_probs=239.6

Q ss_pred             CcHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceE-EEccc-------hhHH----HhhhcccEEEEcCchh
Q 017085            1 MELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV-ISAKG-------QETI----NTALKADLIVLNTAVA   68 (377)
Q Consensus         1 ~~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~----~~~~~~Div~~~~~~~   68 (377)
                      +++++.|.+.||+|++++....+............+  .|..+ ++...       ....    ....+||+||+|++..
T Consensus        19 ~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~h~~~~   96 (372)
T cd03792          19 HSLVPLMRDLGVDTRWEVIKGDPEFFNVTKKFHNAL--QGADIELSEEEKEIYLEWNEENAERPLLDLDADVVVIHDPQP   96 (372)
T ss_pred             HHHHHHHHHcCCCceEEecCCChhHHHHHHHhhHhh--cCCCCCCCHHHHHHHHHHHHHHhccccccCCCCEEEECCCCc
Confidence            368999999999999999765432222111111111  12222 11110       0111    2256899999998764


Q ss_pred             hhHHHHHhhcCCCccccceeEEeeeecccccch---hhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcC
Q 017085           69 GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL---DYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLG  145 (377)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~---~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ng  145 (377)
                      ..+ ..+..  .  ...|++++.|.........   .....+..+|.+++.+.   ++..      .+++..++ ++|||
T Consensus        97 ~~~-~~~~~--~--~~~~~i~~~H~~~~~~~~~~~~~~~~~~~~~d~~i~~~~---~~~~------~~~~~~~~-vipng  161 (372)
T cd03792          97 LAL-PLFKK--K--RGRPWIWRCHIDLSSPNRRVWDFLQPYIEDYDAAVFHLP---EYVP------PQVPPRKV-IIPPS  161 (372)
T ss_pred             hhH-HHhhh--c--CCCeEEEEeeeecCCCcHHHHHHHHHHHHhCCEEeecHH---HhcC------CCCCCceE-EeCCC
Confidence            322 22111  1  1357888999764322211   12334467788887772   2221      12344455 99999


Q ss_pred             ChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCC
Q 017085          146 NSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDM  225 (377)
Q Consensus       146 i~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~  225 (377)
                      +|.........   .......++++++++++.++|+++||+.+.||++.+++++..+.+       ..++++|+++|+|+
T Consensus       162 vd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~-------~~~~~~l~i~G~g~  231 (372)
T cd03792         162 IDPLSGKNREL---SPADIEYILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKE-------RVPDPQLVLVGSGA  231 (372)
T ss_pred             CCCCccccCCC---CHHHHHHHHHHhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHh-------hCCCCEEEEEeCCC
Confidence            99753111010   012245678889998899999999999999999999999997754       33789999999986


Q ss_pred             CcccHHHHHHHHHHHhcCCCCcEEEecCc----CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcc
Q 017085          226 NAQTKFESELRNYVMQKKIQDRVHFVNKT----LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTT  301 (377)
Q Consensus       226 ~~~~~~~~~l~~~~~~~~~~~~v~~~g~~----~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~  301 (377)
                      ..++...+.+++..+..++.+++.|+|..    +++..+|+.||++++||.  .||||++++|||+||+|||+|+.++..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~--~Eg~g~~~lEA~a~G~Pvv~s~~~~~~  309 (372)
T cd03792         232 TDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSI--REGFGLTVTEALWKGKPVIAGPVGGIP  309 (372)
T ss_pred             CCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEeCCC--ccCCCHHHHHHHHcCCCEEEcCCCCch
Confidence            53323344455555567778889999875    678999999999999999  999999999999999999999999999


Q ss_pred             cceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 017085          302 EIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE  367 (377)
Q Consensus       302 e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~  367 (377)
                      +++.++.+|+++++    .++++++|.+++++++.+.+|++++++.+.++|+|+.+++++.++|++
T Consensus       310 ~~i~~~~~g~~~~~----~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~  371 (372)
T cd03792         310 LQIEDGETGFLVDT----VEEAAVRILYLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISK  371 (372)
T ss_pred             hhcccCCceEEeCC----cHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence            99999999999874    678999999999999999999999999998999999999999999986

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.

>PLN02939 transferase, transferring glycosyl groups

Probab=100.00  E-value=1.8e-39  Score=307.77  Aligned_cols=301  Identities=14%  Similarity=0.113  Sum_probs=233.0

Q ss_pred             hcccEEEEcCchhhhHHHHHhhc--CCCccccceeEEeeeecc-cccc----------------h-hh-----------h
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKE--DVPRVLPNVLWWIHEMRG-HYFK----------------L-DY-----------V  104 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~h~~~~-~~~~----------------~-~~-----------~  104 (377)
                      .+|||||+|+-.++.....+...  .......++++|+|+... ..+.                . .+           .
T Consensus       609 ~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK  688 (977)
T PLN02939        609 KKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVK  688 (977)
T ss_pred             CCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHH
Confidence            58999999987665432222211  001123589999998741 1110                0 00           0


Q ss_pred             ccccccceeeeeccchhhHhhhhh----hhhhhccCCCeEEEEcCChhhhHHHhhhh-----------hhhhhhHHHHHH
Q 017085          105 KHLPLVAGAMIDSHVTAEYWKNRT----RERLRIKMPDTYVVHLGNSKELMEVAEDN-----------VAKRVLREHVRE  169 (377)
Q Consensus       105 ~~~~~~~~~~~~s~~~~~~~~~~~----~~~~~~~~~~~~vi~ngi~~~~~~~~~~~-----------~~~~~~~~~~r~  169 (377)
                      ..+..+|.++++|...+..+....    ...++....++.+|+||||.+.|.+..++           ..+...+..+++
T Consensus       689 ~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRk  768 (977)
T PLN02939        689 GAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRK  768 (977)
T ss_pred             HHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHH
Confidence            112367999999999988776521    12245567899999999999988765421           122334677899


Q ss_pred             HhCCCC---CCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCC
Q 017085          170 SLGVRN---EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQD  246 (377)
Q Consensus       170 ~~~~~~---~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~  246 (377)
                      ++|++.   +.++|+++||+.++||++.+++|+..+.+         ++++|+|+|+|+..  .+.+.++.++.++++.+
T Consensus       769 elGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~---------~dvqLVIvGdGp~~--~~e~eL~~La~~l~l~d  837 (977)
T PLN02939        769 QLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE---------LGGQFVLLGSSPVP--HIQREFEGIADQFQSNN  837 (977)
T ss_pred             HhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh---------cCCEEEEEeCCCcH--HHHHHHHHHHHHcCCCC
Confidence            999984   46899999999999999999999987654         57899999998432  35678889999999989


Q ss_pred             cEEEecCcCC--HHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceec---------CcceeeecC
Q 017085          247 RVHFVNKTLT--VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN---------GTTGLLHPV  315 (377)
Q Consensus       247 ~v~~~g~~~~--~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~---------~~~g~~~~~  315 (377)
                      +|.|+|..++  ...+|++||++|+||.  +|+||++++|||+||+|+|++++||+.++|.+         +.+|+++++
T Consensus       838 rV~FlG~~de~lah~IYAaADIFLmPSr--~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~  915 (977)
T PLN02939        838 NIRLILKYDEALSHSIYAASDMFIIPSM--FEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLT  915 (977)
T ss_pred             eEEEEeccCHHHHHHHHHhCCEEEECCC--ccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecC
Confidence            9999998754  3589999999999999  99999999999999999999999999999865         479999999


Q ss_pred             CCCChhHHHHHHHHHhh----CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcccc
Q 017085          316 GKEGITPLAKNIVKLAT----HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKS  374 (377)
Q Consensus       316 ~~~~~~~la~~i~~l~~----~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  374 (377)
                      .|  +++|+++|.++++    |++.+.+|+.++.   .+.|||+.++++|.++|++++...+.
T Consensus       916 ~D--~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~qYeeLY~~ll~~~~~  973 (977)
T PLN02939        916 PD--EQGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSASQYEELYQRAVARARA  973 (977)
T ss_pred             CC--HHHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHhhhh
Confidence            88  9999999998875    7898999988664   46799999999999999999876543

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family

Probab=100.00  E-value=1.2e-39  Score=298.34  Aligned_cols=283  Identities=21%  Similarity=0.221  Sum_probs=227.3

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc-------------cchhhhccccccceeeeeccchhh
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-------------FKLDYVKHLPLVAGAMIDSHVTAE  122 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~-------------~~~~~~~~~~~~~~~~~~s~~~~~  122 (377)
                      .++|+||+|+..++.....+..  .  ...|++++.|+..+..             +.......+..+|.+++.|....+
T Consensus        82 ~~~divh~~~~~~~~~~~~~~~--~--~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~  157 (388)
T TIGR02149        82 VDADVVHSHTWYTFLAGHLAKK--L--YDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMRE  157 (388)
T ss_pred             CCCCeEeecchhhhhHHHHHHH--h--cCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHH
Confidence            4799999998655432222211  1  1357899999864311             011123345788999999999888


Q ss_pred             Hhhhhhhhhh-hccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHH
Q 017085          123 YWKNRTRERL-RIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYE  201 (377)
Q Consensus       123 ~~~~~~~~~~-~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~  201 (377)
                      .+.+    .+ +++..++.++|||+|...+.+..        +...+++++++++.++++++||+.+.||++.++++++.
T Consensus       158 ~~~~----~~~~~~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~  225 (388)
T TIGR02149       158 DILK----YYPDLDPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKGVPHLLDAVHY  225 (388)
T ss_pred             HHHH----HcCCCCcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccCHHHHHHHHHH
Confidence            7765    33 56678899999999988765321        34567888998888999999999999999999999987


Q ss_pred             HHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCC-CCcEEEecC-c--CCHHHHHHhcCEEEecCCCCCCc
Q 017085          202 SLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI-QDRVHFVNK-T--LTVAPYLAAIDVLVQNSQAWGEC  277 (377)
Q Consensus       202 l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~g~-~--~~~~~~~~~adv~l~ps~~~~e~  277 (377)
                      +.          ++++++++|++.... .+.+.+++.+..++. .+++++.+. .  +++.++|+.||++++||.  .|+
T Consensus       226 l~----------~~~~l~i~g~g~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~ps~--~e~  292 (388)
T TIGR02149       226 IP----------KDVQVVLCAGAPDTP-EVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSI--YEP  292 (388)
T ss_pred             Hh----------hcCcEEEEeCCCCcH-HHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeCCc--cCC
Confidence            62          468899988764332 356777887777765 345777653 3  789999999999999999  899


Q ss_pred             cchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCCh------hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHh
Q 017085          278 FGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGI------TPLAKNIVKLATHVERRLTMGKRGYERVKEI  351 (377)
Q Consensus       278 ~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~------~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~  351 (377)
                      +|++++|||++|+|||+|+.++..|++.++.+|+++++++  .      ++++++|.++++|++.+.+|+.++++.+.++
T Consensus       293 ~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~--~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~  370 (388)
T TIGR02149       293 LGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDN--SDADGFQAELAKAINILLADPELAKKMGIAGRKRAEEE  370 (388)
T ss_pred             CChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCC--CcccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999887  7      8999999999999999999999999999999


Q ss_pred             cCHHHHHHHHHHHHHHHH
Q 017085          352 FQEHHMAERIAVVLKEVL  369 (377)
Q Consensus       352 f~~~~~~~~~~~~~~~~~  369 (377)
                      |||+.+++++.++|++++
T Consensus       371 ~s~~~~~~~~~~~y~~~~  388 (388)
T TIGR02149       371 FSWGSIAKKTVEMYRKVL  388 (388)
T ss_pred             CCHHHHHHHHHHHHHhhC
Confidence            999999999999999864

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=7.4e-40  Score=299.81  Aligned_cols=232  Identities=17%  Similarity=0.211  Sum_probs=188.4

Q ss_pred             cccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEecc
Q 017085          106 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS  185 (377)
Q Consensus       106 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~  185 (377)
                      .+..+|.++++|....+.+..    .+   .+++.|||||+|.+.|.+....      ....+....++++.++++|+||
T Consensus       153 ~~~~ad~vi~~s~~~~~~~~~----~~---~~ki~vI~ngvd~~~f~~~~~~------~~~~~~~~~~~~~~~~i~~vgR  219 (396)
T cd03818         153 ALAQADAGVSPTRWQRSTFPA----EL---RSRISVIHDGIDTDRLRPDPQA------RLRLPNGRVLTPGDEVITFVAR  219 (396)
T ss_pred             HHHhCCEEECCCHHHHhhCcH----hh---ccceEEeCCCccccccCCCchh------hhcccccccCCCCCeEEEEECC
Confidence            457899999999998887654    22   2689999999999887653321      1112233345567789999998


Q ss_pred             -ccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCc-------ccHHHHHHHHHHH-hcCCCCcEEEecCc--
Q 017085          186 -VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA-------QTKFESELRNYVM-QKKIQDRVHFVNKT--  254 (377)
Q Consensus       186 -~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~-------~~~~~~~l~~~~~-~~~~~~~v~~~g~~--  254 (377)
                       +.+.||++.+++|+..+.+       +.++++|+|+|++.+.       .+.+.+.+.+... .++ .++|+|+|++  
T Consensus       220 ~l~~~Kg~~~ll~a~~~l~~-------~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~V~f~G~v~~  291 (396)
T cd03818         220 NLEPYRGFHVFMRALPRLLR-------ARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLD-LSRVHFLGRVPY  291 (396)
T ss_pred             CcccccCHHHHHHHHHHHHH-------HCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccC-cceEEEeCCCCH
Confidence             9999999999999997765       3489999999975321       0012223222222 122 4789999987  


Q ss_pred             CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCH
Q 017085          255 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHV  334 (377)
Q Consensus       255 ~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~  334 (377)
                      +++.++|+.||++++||.  .|++|++++||||||+|||+|+.++..|++.++.+|++++++|  +++++++|.++++|+
T Consensus       292 ~~~~~~l~~adv~v~~s~--~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv~~~d--~~~la~~i~~ll~~~  367 (396)
T cd03818         292 DQYLALLQVSDVHVYLTY--PFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLVDFFD--PDALAAAVIELLDDP  367 (396)
T ss_pred             HHHHHHHHhCcEEEEcCc--ccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEcCCCC--HHHHHHHHHHHHhCH
Confidence            689999999999999999  9999999999999999999999999999999999999999988  999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 017085          335 ERRLTMGKRGYERVKEIFQEHHMAERIA  362 (377)
Q Consensus       335 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~  362 (377)
                      +.+.+|++++++.+.++|||+.++++|.
T Consensus       368 ~~~~~l~~~ar~~~~~~fs~~~~~~~~~  395 (396)
T cd03818         368 ARRARLRRAARRTALRYDLLSVCLPRQL  395 (396)
T ss_pred             HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence            9999999999999999999999999885

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=100.00  E-value=1.8e-39  Score=312.33  Aligned_cols=300  Identities=14%  Similarity=0.126  Sum_probs=226.0

Q ss_pred             cccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeeccccc------------------c--hh---hhcccccccee
Q 017085           57 KADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYF------------------K--LD---YVKHLPLVAGA  113 (377)
Q Consensus        57 ~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~------------------~--~~---~~~~~~~~~~~  113 (377)
                      .||+||.|...++.....+... .   ..|++.|.|.......                  .  ..   -...+..++.+
T Consensus       310 ~pDvIHaHyw~sG~aa~~L~~~-l---gVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~V  385 (1050)
T TIGR02468       310 WPYVIHGHYADAGDSAALLSGA-L---NVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIV  385 (1050)
T ss_pred             CCCEEEECcchHHHHHHHHHHh-h---CCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEE
Confidence            4999999976655433333221 1   2589999996421110                  0  01   12335688999


Q ss_pred             eeeccchhhHhhhhhh------------------hhhhccCCCeEEEEcCChhhhHHHhhhhhhhh-------------h
Q 017085          114 MIDSHVTAEYWKNRTR------------------ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKR-------------V  162 (377)
Q Consensus       114 ~~~s~~~~~~~~~~~~------------------~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~-------------~  162 (377)
                      ++.|....+.....+.                  .-+|...+++.|||||+|++.|.+........             .
T Consensus       386 IasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~  465 (1050)
T TIGR02468       386 ITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPP  465 (1050)
T ss_pred             EEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccch
Confidence            9999887764332110                  01223345999999999999988643211100             0


Q ss_pred             hHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCc------ccHHHHHHH
Q 017085          163 LREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA------QTKFESELR  236 (377)
Q Consensus       163 ~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~------~~~~~~~l~  236 (377)
                      ....++ .+..+++.++|+++||+.++||++.||+|+..+.+. +    ..+++. +|+|+++..      ..++..+++
T Consensus       466 ~~~~l~-r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l-~----~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~  538 (1050)
T TIGR02468       466 IWSEIM-RFFTNPRKPMILALARPDPKKNITTLVKAFGECRPL-R----ELANLT-LIMGNRDDIDEMSSGSSSVLTSVL  538 (1050)
T ss_pred             hhHHHH-hhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhh-c----cCCCEE-EEEecCchhhhhhccchHHHHHHH
Confidence            011233 344567788999999999999999999999987532 1    124665 466765321      113456788


Q ss_pred             HHHHhcCCCCcEEEecCc--CCHHHHHHhc----CEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcce
Q 017085          237 NYVMQKKIQDRVHFVNKT--LTVAPYLAAI----DVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTG  310 (377)
Q Consensus       237 ~~~~~~~~~~~v~~~g~~--~~~~~~~~~a----dv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g  310 (377)
                      ++++++++.++|.|+|+.  +++.++|+.|    |+||+||.  .|+||++++||||||+|||+|+.||..|++.++.+|
T Consensus       539 ~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~--~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nG  616 (1050)
T TIGR02468       539 KLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNG  616 (1050)
T ss_pred             HHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcc--cCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcE
Confidence            999999999999999975  7899999988    69999999  999999999999999999999999999999999999


Q ss_pred             eeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcc
Q 017085          311 LLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKS  372 (377)
Q Consensus       311 ~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  372 (377)
                      +++++.|  +++|+++|.++++|++.+.+|+.++++.+. +|+|+.+++++.+.+..+..+.
T Consensus       617 lLVdP~D--~eaLA~AL~~LL~Dpelr~~m~~~gr~~v~-~FSWe~ia~~yl~~i~~~~~~~  675 (1050)
T TIGR02468       617 LLVDPHD--QQAIADALLKLVADKQLWAECRQNGLKNIH-LFSWPEHCKTYLSRIASCRPRH  675 (1050)
T ss_pred             EEECCCC--HHHHHHHHHHHhhCHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHhccC
Confidence            9999998  999999999999999999999999999885 6999999999999999887554

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

Probab=100.00  E-value=4.3e-39  Score=291.79  Aligned_cols=329  Identities=22%  Similarity=0.281  Sum_probs=245.0

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEE--------ccchhHHHhhhcccEEEEcCchhhhHHH
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--------AKGQETINTALKADLIVLNTAVAGKWLD   73 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~Div~~~~~~~~~~~~   73 (377)
                      +|+++|.+.||+|++++...............  .  ..+....        ......++++.+||+||+|...+..+..
T Consensus        20 ~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~pdiv~~~~~~~~~~~~   95 (360)
T cd04951          20 DLADQFVAKGHQVAIISLTGESEVKPPIDATI--I--LNLNMSKNPLSFLLALWKLRKILRQFKPDVVHAHMFHANIFAR   95 (360)
T ss_pred             HHHHhcccCCceEEEEEEeCCCCccchhhccc--e--EEecccccchhhHHHHHHHHHHHHhcCCCEEEEcccchHHHHH
Confidence            68999999999999999654432111110000  0  0000000        0123345567899999999865543332


Q ss_pred             HHhhcCCCccccceeEEeeeeccccc--chhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhH
Q 017085           74 AVLKEDVPRVLPNVLWWIHEMRGHYF--KLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELM  151 (377)
Q Consensus        74 ~~~~~~~~~~~~~~v~~~h~~~~~~~--~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~  151 (377)
                      .+...   ...++++.+.|+......  ...+.......+.+++.|....+++.+    ..+++.+++.++|||+|...+
T Consensus        96 l~~~~---~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~----~~~~~~~~~~~i~ng~~~~~~  168 (360)
T cd04951          96 LLRLF---LPSPPLICTAHSKNEGGRLRMLAYRLTDFLSDLTTNVSKEALDYFIA----SKAFNANKSFVVYNGIDTDRF  168 (360)
T ss_pred             HHHhh---CCCCcEEEEeeccCchhHHHHHHHHHHhhccCceEEEcHHHHHHHHh----ccCCCcccEEEEccccchhhc
Confidence            22221   123578888887643211  111111223456666777776666654    444677899999999998766


Q ss_pred             HHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHH
Q 017085          152 EVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKF  231 (377)
Q Consensus       152 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~  231 (377)
                      .....      .+...++++++++++++++++|++.+.||++.+++++.++.+       +.++++|+|+|+|     +.
T Consensus       169 ~~~~~------~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~-------~~~~~~l~i~G~g-----~~  230 (360)
T cd04951         169 RKDPA------RRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLS-------DYLDIKLLIAGDG-----PL  230 (360)
T ss_pred             CcchH------HHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHh-------hCCCeEEEEEcCC-----Cc
Confidence            43321      145578889998889999999999999999999999997755       3478999999998     45


Q ss_pred             HHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCccee
Q 017085          232 ESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGL  311 (377)
Q Consensus       232 ~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~  311 (377)
                      .+++++.++++++.++|.|+|+.+++.++|+.||++++||.  .|++|++++|||++|+|||+++.++..|++.+  +|+
T Consensus       231 ~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~s~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~  306 (360)
T cd04951         231 RATLERLIKALGLSNRVKLLGLRDDIAAYYNAADLFVLSSA--WEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGL  306 (360)
T ss_pred             HHHHHHHHHhcCCCCcEEEecccccHHHHHHhhceEEeccc--ccCCChHHHHHHHcCCCEEEecCCChhhEecC--Cce
Confidence            67888889999998999999999999999999999999999  89999999999999999999999999999965  889


Q ss_pred             eecCCCCChhHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 017085          312 LHPVGKEGITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK  366 (377)
Q Consensus       312 ~~~~~~~~~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  366 (377)
                      +++++|  +++++++|.++++ +++.+..++.+ ++.+.++|||+.+++++.++|+
T Consensus       307 ~~~~~~--~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~  359 (360)
T cd04951         307 IVPISD--PEALANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYT  359 (360)
T ss_pred             EeCCCC--HHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence            999887  9999999999995 66666666655 8888899999999999999996

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type

Probab=100.00  E-value=2e-39  Score=302.96  Aligned_cols=291  Identities=18%  Similarity=0.172  Sum_probs=223.3

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeeccc-ccch---------------h----------hhccccc
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGH-YFKL---------------D----------YVKHLPL  109 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~-~~~~---------------~----------~~~~~~~  109 (377)
                      .+|||||+|...++.....+.. ......+|+++++|+.... .+..               .          ....+..
T Consensus       127 ~~~DiiH~hdw~~~~~~~~l~~-~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~  205 (473)
T TIGR02095       127 WQPDVVHAHDWHTALVPALLKA-VYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVY  205 (473)
T ss_pred             CCCCEEEECCcHHHHHHHHHHh-hccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHh
Confidence            5899999998655533332222 1111025899999986421 1110               0          1123468


Q ss_pred             cceeeeeccchhhHhhhhh-----hhhhhccCCCeEEEEcCChhhhHHHhhhhh-----------hhhhhHHHHHHHhCC
Q 017085          110 VAGAMIDSHVTAEYWKNRT-----RERLRIKMPDTYVVHLGNSKELMEVAEDNV-----------AKRVLREHVRESLGV  173 (377)
Q Consensus       110 ~~~~~~~s~~~~~~~~~~~-----~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~-----------~~~~~~~~~r~~~~~  173 (377)
                      +|.++++|...++.+....     ...+..+..++.+|+||+|.+.|.+.....           .+...+..+++++|+
T Consensus       206 ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl  285 (473)
T TIGR02095       206 ADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGL  285 (473)
T ss_pred             CCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCC
Confidence            8999999998877665420     001122457899999999999876532210           122346678999999


Q ss_pred             CC--CCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEe
Q 017085          174 RN--EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFV  251 (377)
Q Consensus       174 ~~--~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~  251 (377)
                      +.  +.++|+++||+.++||++.+++++.++.+         .+++|+|+|.|.+   ++.+++++++.+++  .++.+.
T Consensus       286 ~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~---------~~~~lvi~G~g~~---~~~~~l~~~~~~~~--~~v~~~  351 (473)
T TIGR02095       286 PVDDDVPLFGVISRLTQQKGVDLLLAALPELLE---------LGGQLVVLGTGDP---ELEEALRELAERYP--GNVRVI  351 (473)
T ss_pred             CccCCCCEEEEEecCccccChHHHHHHHHHHHH---------cCcEEEEECCCCH---HHHHHHHHHHHHCC--CcEEEE
Confidence            86  77999999999999999999999997754         4699999999852   46678888887764  567777


Q ss_pred             cCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecC------cceeeecCCCCChhHH
Q 017085          252 NKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG------TTGLLHPVGKEGITPL  323 (377)
Q Consensus       252 g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~------~~g~~~~~~~~~~~~l  323 (377)
                      +..  +++..+|++||++++||.  .|+||++++|||+||+|||+++.||+.|++.++      .+|+++++.|  ++++
T Consensus       352 ~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d--~~~l  427 (473)
T TIGR02095       352 IGYDEALAHLIYAGADFILMPSR--FEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYD--PGAL  427 (473)
T ss_pred             EcCCHHHHHHHHHhCCEEEeCCC--cCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCC--HHHH
Confidence            654  446789999999999999  999999999999999999999999999999987      8999999988  9999


Q ss_pred             HHHHHHHhh----CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 017085          324 AKNIVKLAT----HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEV  368 (377)
Q Consensus       324 a~~i~~l~~----~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~  368 (377)
                      +++|.++++    +++.+.++++++.+   ++|||+++++++.++|+++
T Consensus       428 a~~i~~~l~~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~Y~~l  473 (473)
T TIGR02095       428 LAALSRALRLYRQDPSLWEALQKNAMS---QDFSWDKSAKQYVELYRSL  473 (473)
T ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHhc---cCCCcHHHHHHHHHHHHhC
Confidence            999999888    89989999888753   6799999999999999863

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.

>PRK14099 glycogen synthase; Provisional

Probab=100.00  E-value=3.8e-39  Score=298.52  Aligned_cols=295  Identities=18%  Similarity=0.207  Sum_probs=227.6

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeeccc-ccch-------------------------hhhccccc
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGH-YFKL-------------------------DYVKHLPL  109 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~-~~~~-------------------------~~~~~~~~  109 (377)
                      .+|||||+|+..++.....+ .... ....|.|.|+|+.... .+..                         ..+..+..
T Consensus       132 ~~pDIiH~Hdw~~~l~~~~l-~~~~-~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~  209 (485)
T PRK14099        132 FVPDIVHAHDWQAGLAPAYL-HYSG-RPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQL  209 (485)
T ss_pred             CCCCEEEECCcHHHHHHHHH-HhCC-CCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHh
Confidence            58999999985555433322 2111 1235899999986321 0100                         01233468


Q ss_pred             cceeeeeccchhhHhhhhh-----hhhhhccCCCeEEEEcCChhhhHHHhhhhh-----------hhhhhHHHHHHHhCC
Q 017085          110 VAGAMIDSHVTAEYWKNRT-----RERLRIKMPDTYVVHLGNSKELMEVAEDNV-----------AKRVLREHVRESLGV  173 (377)
Q Consensus       110 ~~~~~~~s~~~~~~~~~~~-----~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~-----------~~~~~~~~~r~~~~~  173 (377)
                      +|.++++|...++.+.+..     ...++.+..++.+|+||+|.+.|.+.....           .+...+..+++++|+
T Consensus       210 ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl  289 (485)
T PRK14099        210 ADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGL  289 (485)
T ss_pred             cCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCC
Confidence            8999999999988776421     001223467899999999999887643211           122335678899999


Q ss_pred             CC--CCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcE-EE
Q 017085          174 RN--EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRV-HF  250 (377)
Q Consensus       174 ~~--~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v-~~  250 (377)
                      +.  +.++|+++||+.++||++.+++|+..+.+         .+++|+|+|+|.+   ++.+.+++++++++  +++ .+
T Consensus       290 ~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~---------~~~~lvivG~G~~---~~~~~l~~l~~~~~--~~v~~~  355 (485)
T PRK14099        290 DPDPDALLLGVISRLSWQKGLDLLLEALPTLLG---------EGAQLALLGSGDA---ELEARFRAAAQAYP--GQIGVV  355 (485)
T ss_pred             CcccCCcEEEEEecCCccccHHHHHHHHHHHHh---------cCcEEEEEecCCH---HHHHHHHHHHHHCC--CCEEEE
Confidence            74  46889999999999999999999997754         5799999999842   35677888887765  345 78


Q ss_pred             ecCcCCHHHHH-HhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecC---------cceeeecCCCCCh
Q 017085          251 VNKTLTVAPYL-AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG---------TTGLLHPVGKEGI  320 (377)
Q Consensus       251 ~g~~~~~~~~~-~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~---------~~g~~~~~~~~~~  320 (377)
                      +|+.+++..+| +.||++++||.  .|+||++++|||+||+|+|++++||++|++.++         .+|+++++.|  +
T Consensus       356 ~G~~~~l~~~~~a~aDifv~PS~--~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d--~  431 (485)
T PRK14099        356 IGYDEALAHLIQAGADALLVPSR--FEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVT--A  431 (485)
T ss_pred             eCCCHHHHHHHHhcCCEEEECCc--cCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCC--H
Confidence            99988898887 56999999999  999999999999999999999999999998775         5899999998  9


Q ss_pred             hHHHHHHHH---HhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccc
Q 017085          321 TPLAKNIVK---LATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSK  373 (377)
Q Consensus       321 ~~la~~i~~---l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~  373 (377)
                      ++|+++|.+   +++|++.+.++++++++   ++|||++++++++++|++++...+
T Consensus       432 ~~La~ai~~a~~l~~d~~~~~~l~~~~~~---~~fSw~~~a~~y~~lY~~l~~~~~  484 (485)
T PRK14099        432 DALAAALRKTAALFADPVAWRRLQRNGMT---TDVSWRNPAQHYAALYRSLVAERR  484 (485)
T ss_pred             HHHHHHHHHHHHHhcCHHHHHHHHHHhhh---hcCChHHHHHHHHHHHHHHHhhhC
Confidence            999999997   67799999999998863   679999999999999999986543

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=100.00  E-value=2.7e-39  Score=293.94  Aligned_cols=275  Identities=21%  Similarity=0.257  Sum_probs=225.1

Q ss_pred             hHHHhhhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeeccccc------------chhhhccccccceeeeec
Q 017085           50 ETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYF------------KLDYVKHLPLVAGAMIDS  117 (377)
Q Consensus        50 ~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~------------~~~~~~~~~~~~~~~~~s  117 (377)
                      ..++++.+||+||+|....+.....+.+.    ...|++++.|+......            .......++.+|.+++.|
T Consensus        75 ~~~~~~~~~dvvh~~~~~~~~~~~~~~~~----~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s  150 (367)
T cd05844          75 RRLLRRHRPDLVHAHFGFDGVYALPLARR----LGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVS  150 (367)
T ss_pred             HHHHHhhCCCEEEeccCchHHHHHHHHHH----cCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECC
Confidence            34567789999999976654444333221    23588898996432111            112234457889999999


Q ss_pred             cchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHH
Q 017085          118 HVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLH  197 (377)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~  197 (377)
                      ....+.+.+     .|++.+++.++|||+|.+.+.+...                 ..+.+.++++|++.+.||++.+++
T Consensus       151 ~~~~~~~~~-----~~~~~~~i~vi~~g~d~~~~~~~~~-----------------~~~~~~i~~~G~~~~~K~~~~li~  208 (367)
T cd05844         151 QFIRDRLLA-----LGFPPEKVHVHPIGVDTAKFTPATP-----------------ARRPPRILFVGRFVEKKGPLLLLE  208 (367)
T ss_pred             HHHHHHHHH-----cCCCHHHeEEecCCCCHHhcCCCCC-----------------CCCCcEEEEEEeeccccChHHHHH
Confidence            998887763     4677788999999999876643211                 145678999999999999999999


Q ss_pred             HHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCC--
Q 017085          198 SFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQA--  273 (377)
Q Consensus       198 a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~--  273 (377)
                      ++..+.+       +.++++|+++|++     ++.+++++.++++++.++|+|+|++  +++.++|+.||++++||..  
T Consensus       209 a~~~l~~-------~~~~~~l~ivG~g-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~  276 (367)
T cd05844         209 AFARLAR-------RVPEVRLVIIGDG-----PLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAP  276 (367)
T ss_pred             HHHHHHH-------hCCCeEEEEEeCc-----hHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEECcccCC
Confidence            9997765       3478999999987     5678899999999999999999987  6799999999999999962  


Q ss_pred             --CCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHh
Q 017085          274 --WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEI  351 (377)
Q Consensus       274 --~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~  351 (377)
                        ..||+|++++|||++|+|||+|+.++..|++.++.+|+++++.|  +++++++|.+++++++.+.+++.++++.+.++
T Consensus       277 ~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d--~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~  354 (367)
T cd05844         277 SGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGD--VAALAAALGRLLADPDLRARMGAAGRRRVEER  354 (367)
T ss_pred             CCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence              14899999999999999999999999999999999999999887  99999999999999999999999999999999


Q ss_pred             cCHHHHHHHHHHH
Q 017085          352 FQEHHMAERIAVV  364 (377)
Q Consensus       352 f~~~~~~~~~~~~  364 (377)
                      |||+.+++++.++
T Consensus       355 ~s~~~~~~~l~~i  367 (367)
T cd05844         355 FDLRRQTAKLEAL  367 (367)
T ss_pred             CCHHHHHHHHhcC
Confidence            9999999998753

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.2e-38  Score=286.92  Aligned_cols=326  Identities=23%  Similarity=0.286  Sum_probs=253.4

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEc------------cchhHHHhhhcccEEEEcCchhh
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA------------KGQETINTALKADLIVLNTAVAG   69 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~Div~~~~~~~~   69 (377)
                      +|+++|.+.||+|.+++........       ..+...++.++..            .....+++..+||+||++.....
T Consensus        20 ~l~~~l~~~~~~v~~~~~~~~~~~~-------~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~div~~~~~~~~   92 (365)
T cd03807          20 RLLKGLDRDRFEHVVISLTDRGELG-------EELEEAGVPVYCLGKRPGRPDPGALLRLYKLIRRLRPDVVHTWMYHAD   92 (365)
T ss_pred             HHHHHhhhccceEEEEecCcchhhh-------HHHHhcCCeEEEEecccccccHHHHHHHHHHHHhhCCCEEEecccccc
Confidence            6899999999999999965433211       1222234444221            12344556789999999875544


Q ss_pred             hHHHHHhhcCCCccccceeEEeeeecccc---cc----hhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEE
Q 017085           70 KWLDAVLKEDVPRVLPNVLWWIHEMRGHY---FK----LDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVV  142 (377)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~v~~~h~~~~~~---~~----~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi  142 (377)
                      .+........   ..++++++.|+.....   ..    .......+..+.+++.|....+.+..     ++++..++.++
T Consensus        93 ~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~-----~~~~~~~~~vi  164 (365)
T cd03807          93 LYGGLAARLA---GVPPVIWGIRHSDLDLGKKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQA-----IGYPPKKIVVI  164 (365)
T ss_pred             HHHHHHHHhc---CCCcEEEEecCCcccccchhHhHHHHHHHHhccccCeEEeccHHHHHHHHH-----cCCChhheeEe
Confidence            3332222211   2358899999875441   11    11223345677788888888777763     36777899999


Q ss_pred             EcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEe
Q 017085          143 HLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIG  222 (377)
Q Consensus       143 ~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G  222 (377)
                      |||+|...+.....      .+...+++++++++.++++++|++.+.||++.+++++..+.+       +.++++|+++|
T Consensus       165 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~-------~~~~~~l~i~G  231 (365)
T cd03807         165 PNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAALLLK-------KFPNARLLLVG  231 (365)
T ss_pred             CCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHHHHHHH-------hCCCeEEEEec
Confidence            99999876654322      134567889998889999999999999999999999997755       34789999999


Q ss_pred             cCCCcccHHHHHHHHHHH-hcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcc
Q 017085          223 SDMNAQTKFESELRNYVM-QKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTT  301 (377)
Q Consensus       223 ~~~~~~~~~~~~l~~~~~-~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~  301 (377)
                      .+.     ....++.... +.++.+++.+.|..+++.++|+.||++++||.  .|++|++++|||++|+|||+++.++..
T Consensus       232 ~~~-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~g~PvI~~~~~~~~  304 (365)
T cd03807         232 DGP-----DRANLELLALKELGLEDKVILLGERSDVPALLNALDVFVLSSL--SEGFPNVLLEAMACGLPVVATDVGDNA  304 (365)
T ss_pred             CCc-----chhHHHHHHHHhcCCCceEEEccccccHHHHHHhCCEEEeCCc--cccCCcHHHHHHhcCCCEEEcCCCChH
Confidence            974     3344455554 78888999999998999999999999999999  899999999999999999999999999


Q ss_pred             cceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 017085          302 EIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK  366 (377)
Q Consensus       302 e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  366 (377)
                      +++.+  +|++++++|  +++++++|.+++++++.+.++++++++.+.++|||+.+++++.++|+
T Consensus       305 e~~~~--~g~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~  365 (365)
T cd03807         305 ELVGD--TGFLVPPGD--PEALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAYEELYR  365 (365)
T ss_pred             HHhhc--CCEEeCCCC--HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence            99976  899999888  99999999999999999999999999999999999999999999984

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.8e-38  Score=290.41  Aligned_cols=329  Identities=23%  Similarity=0.229  Sum_probs=248.2

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEcc---------------------chhHHHhhh--cc
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK---------------------GQETINTAL--KA   58 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~--~~   58 (377)
                      +|+++|+++||+|+|++..........      .....++.+....                     .....++..  +|
T Consensus        29 ~l~~~L~~~g~~V~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (398)
T cd03800          29 ELARALARLGHEVDIFTRRIDDALPPI------VELAPGVRVVRVPAGPAEYLPKEELWPYLDEFADDLLRFLRREGGRP  102 (398)
T ss_pred             HHHHHHhccCceEEEEEecCCcccCCc------cccccceEEEecccccccCCChhhcchhHHHHHHHHHHHHHhcCCCc
Confidence            689999999999999996544322110      0011222222110                     112223444  99


Q ss_pred             cEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccc--------------hhhhccccccceeeeeccchhhHh
Q 017085           59 DLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK--------------LDYVKHLPLVAGAMIDSHVTAEYW  124 (377)
Q Consensus        59 Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~--------------~~~~~~~~~~~~~~~~s~~~~~~~  124 (377)
                      |+||+|....+.....+...    ...|++.+.|+.......              ......+..+|.+++.|....+.+
T Consensus       103 Div~~~~~~~~~~~~~~~~~----~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~  178 (398)
T cd03800         103 DLIHAHYWDSGLVALLLARR----LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEEL  178 (398)
T ss_pred             cEEEEecCccchHHHHHHhh----cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHH
Confidence            99999976544333322211    124788888876421111              011234568899999999888777


Q ss_pred             hhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHH
Q 017085          125 KNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLE  204 (377)
Q Consensus       125 ~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~  204 (377)
                      .+    .++.+..++.+||||+|.+.+.+....       ...++.++.+.++++|+++||+.+.||++.+++++..+.+
T Consensus       179 ~~----~~~~~~~~~~vi~ng~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~  247 (398)
T cd03800         179 YS----LYGAYPRRIRVVPPGVDLERFTPYGRA-------EARRARLLRDPDKPRILAVGRLDPRKGIDTLIRAYAELPE  247 (398)
T ss_pred             HH----HccccccccEEECCCCCccceecccch-------hhHHHhhccCCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence            65    344455679999999998876543221       1225556677788999999999999999999999997754


Q ss_pred             HHhhhcccCCCeEEEEEecCCCccc-HHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchH
Q 017085          205 LIKEKKLEVPSVHAVIIGSDMNAQT-KFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRI  281 (377)
Q Consensus       205 ~l~~~~~~~~~~~l~i~G~~~~~~~-~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~  281 (377)
                             +.++++|+++|++..... .....++++++++++.+++.|+|++  +++.++|+.||++++||.  .|++|++
T Consensus       248 -------~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~--~e~~~~~  318 (398)
T cd03800         248 -------LRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPAL--YEPFGLT  318 (398)
T ss_pred             -------hCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEeccc--ccccCcH
Confidence                   337899999998754321 2345578888889998999999996  679999999999999999  8999999


Q ss_pred             HHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 017085          282 TIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERI  361 (377)
Q Consensus       282 ~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~  361 (377)
                      ++|||++|+|||+++.++..+++.++++|+++++.|  +++++++|.+++++++.+.+++.++++.+.++|||+.+++++
T Consensus       319 l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~  396 (398)
T cd03800         319 ALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRD--PEALAAALRRLLTDPALRRRLSRAGLRRARARYTWERVAARL  396 (398)
T ss_pred             HHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence            999999999999999999999999999999999888  999999999999999999999999999998999999999987


Q ss_pred             H
Q 017085          362 A  362 (377)
Q Consensus       362 ~  362 (377)
                      .
T Consensus       397 ~  397 (398)
T cd03800         397 L  397 (398)
T ss_pred             h
Confidence            6

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.

>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.2e-39  Score=301.92  Aligned_cols=276  Identities=22%  Similarity=0.249  Sum_probs=226.7

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeeccc--------------ccchhh--------hcccccccee
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGH--------------YFKLDY--------VKHLPLVAGA  113 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~--------------~~~~~~--------~~~~~~~~~~  113 (377)
                      .++|+||+|+...+.++..+....   ...|++++.|+....              .++..+        ...++.+|.+
T Consensus       172 ~~~dviH~~s~~~~g~~~~~~~~~---~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~I  248 (475)
T cd03813         172 PKADVYHAVSTGYAGLLGALAKAR---RGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRI  248 (475)
T ss_pred             CCCCEEeccCcchHHHHHHHHHHH---hCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence            578999999754333333322211   235899999985321              011111        2234688999


Q ss_pred             eeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhH
Q 017085          114 MIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQD  193 (377)
Q Consensus       114 ~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~  193 (377)
                      ++.|....+...     .+|.+++++.+||||+|.+.+.+....              ..+++.++|+++||+.+.||++
T Consensus       249 i~~s~~~~~~~~-----~~g~~~~ki~vIpNgid~~~f~~~~~~--------------~~~~~~~~i~~vGrl~~~Kg~~  309 (475)
T cd03813         249 TTLYEGNRERQI-----EDGADPEKIRVIPNGIDPERFAPARRA--------------RPEKEPPVVGLIGRVVPIKDIK  309 (475)
T ss_pred             EecCHHHHHHHH-----HcCCCHHHeEEeCCCcCHHHcCCcccc--------------ccCCCCcEEEEEeccccccCHH
Confidence            999998776544     567788899999999999877543210              1235678999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCC
Q 017085          194 LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA  273 (377)
Q Consensus       194 ~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~  273 (377)
                      .+++|++.+.+       +.++++++|+|+++.. +.+.++++++++++++.++|+|+| .+++.++|+.+|++++||. 
T Consensus       310 ~li~a~~~l~~-------~~p~~~l~IvG~g~~~-~~~~~e~~~li~~l~l~~~V~f~G-~~~v~~~l~~aDv~vlpS~-  379 (475)
T cd03813         310 TFIRAAAIVRK-------KIPDAEGWVIGPTDED-PEYAEECRELVESLGLEDNVKFTG-FQNVKEYLPKLDVLVLTSI-  379 (475)
T ss_pred             HHHHHHHHHHH-------hCCCeEEEEECCCCcC-hHHHHHHHHHHHHhCCCCeEEEcC-CccHHHHHHhCCEEEeCch-
Confidence            99999997765       3489999999998532 257889999999999999999999 6799999999999999999 


Q ss_pred             CCCccchHHHHHHHcCCcEEEeCCCCcccceec------CcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 017085          274 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN------GTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYER  347 (377)
Q Consensus       274 ~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~------~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~  347 (377)
                       .|++|++++|||+||+|||+|+.|++.|++.+      |.+|+++++.|  +++++++|.++++|++.+.++++++++.
T Consensus       380 -~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d--~~~la~ai~~ll~~~~~~~~~~~~a~~~  456 (475)
T cd03813         380 -SEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPAD--PEALARAILRLLKDPELRRAMGEAGRKR  456 (475)
T ss_pred             -hhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEECCCC--HHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence             99999999999999999999999999999988      56999999988  9999999999999999999999999999


Q ss_pred             HHHhcCHHHHHHHHHHHHH
Q 017085          348 VKEIFQEHHMAERIAVVLK  366 (377)
Q Consensus       348 ~~~~f~~~~~~~~~~~~~~  366 (377)
                      +.+.|+|+.++++|.++|+
T Consensus       457 v~~~~s~~~~~~~y~~lY~  475 (475)
T cd03813         457 VERYYTLERMIDSYRRLYL  475 (475)
T ss_pred             HHHhCCHHHHHHHHHHHhC
Confidence            9999999999999999984

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>TIGR02470 sucr_synth sucrose synthase

Probab=100.00  E-value=6e-38  Score=296.28  Aligned_cols=295  Identities=17%  Similarity=0.187  Sum_probs=216.8

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecc-------cccc---hh---------hhccccccceeeee
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRG-------HYFK---LD---------YVKHLPLVAGAMID  116 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~-------~~~~---~~---------~~~~~~~~~~~~~~  116 (377)
                      .+||+||+|....+.....+.. ..   ..|.+.+.|....       .++.   ..         -...+..+|.+++.
T Consensus       384 ~~pDlIHahy~d~glva~lla~-~l---gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IIts  459 (784)
T TIGR02470       384 GKPDLIIGNYSDGNLVASLLAR-KL---GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITS  459 (784)
T ss_pred             CCCCEEEECCCchHHHHHHHHH-hc---CCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEEC
Confidence            4699999998766544433222 12   2477778885421       0111   01         11334568899999


Q ss_pred             ccchhhHhhhhhh-----------hhh----hc--cCCCeEEEEcCChhhhHHHhhhhhhhh-----------hhHHHHH
Q 017085          117 SHVTAEYWKNRTR-----------ERL----RI--KMPDTYVVHLGNSKELMEVAEDNVAKR-----------VLREHVR  168 (377)
Q Consensus       117 s~~~~~~~~~~~~-----------~~~----~~--~~~~~~vi~ngi~~~~~~~~~~~~~~~-----------~~~~~~r  168 (377)
                      |........+...           ..+    |+  +.+|+.|||+|+|.+.|.+........           ..+.+.+
T Consensus       460 T~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~  539 (784)
T TIGR02470       460 TYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDND  539 (784)
T ss_pred             cHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHH
Confidence            8633221111100           011    22  557999999999999876543211100           0123445


Q ss_pred             HHhCC--CCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCc----c---cHHHHHHHHHH
Q 017085          169 ESLGV--RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA----Q---TKFESELRNYV  239 (377)
Q Consensus       169 ~~~~~--~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~----~---~~~~~~l~~~~  239 (377)
                      +.+|+  ++++++|+++||+.+.||++.+++|+.++.. +      .++++|+|+|++...    +   ..+.+++.+++
T Consensus       540 ~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~-l------~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la  612 (784)
T TIGR02470       540 EHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPK-L------RELVNLVVVAGKLDAKESKDREEQAEIEKMHNLI  612 (784)
T ss_pred             HHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHh-h------CCCeEEEEEeCCcccccccchhHHHHHHHHHHHH
Confidence            67776  5677899999999999999999999986642 1      156899999986421    1   12456788899


Q ss_pred             HhcCCCCcEEEecCc---CCHHHHHH----hcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceee
Q 017085          240 MQKKIQDRVHFVNKT---LTVAPYLA----AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLL  312 (377)
Q Consensus       240 ~~~~~~~~v~~~g~~---~~~~~~~~----~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~  312 (377)
                      +++++.++|.|+|.+   .++.++|+    .+|++++||.  .|+||++++|||+||+|||+|+.||+.|++.++.+|++
T Consensus       613 ~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~--~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfL  690 (784)
T TIGR02470       613 DQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPAL--YEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFH  690 (784)
T ss_pred             HHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEE
Confidence            999999999999974   45556654    3579999999  99999999999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHHHHHHh----hCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017085          313 HPVGKEGITPLAKNIVKLA----THVERRLTMGKRGYERVKEIFQEHHMAERIAVVL  365 (377)
Q Consensus       313 ~~~~~~~~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~  365 (377)
                      +++.|  +++++++|.+++    +|++.+.+++.++++++.++|||+.+++++.++.
T Consensus       691 Vdp~D--~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~  745 (784)
T TIGR02470       691 IDPYH--GEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA  745 (784)
T ss_pred             eCCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            99998  999999999876    6999999999999999999999999999998865

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.1e-38  Score=297.23  Aligned_cols=290  Identities=19%  Similarity=0.163  Sum_probs=220.4

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcC--CCccccceeEEeeeecccc-cc--------------------------hhhhcc
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKED--VPRVLPNVLWWIHEMRGHY-FK--------------------------LDYVKH  106 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~h~~~~~~-~~--------------------------~~~~~~  106 (377)
                      .+||+||+|...++.....+....  ......|+++++|+..... +.                          ......
T Consensus       128 ~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (476)
T cd03791         128 WKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAG  207 (476)
T ss_pred             CCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHH
Confidence            689999999866544333322211  0112368999999864211 10                          011223


Q ss_pred             ccccceeeeeccchhhHhhhh-----hhhhhhccCCCeEEEEcCChhhhHHHhhhhh-----------hhhhhHHHHHHH
Q 017085          107 LPLVAGAMIDSHVTAEYWKNR-----TRERLRIKMPDTYVVHLGNSKELMEVAEDNV-----------AKRVLREHVRES  170 (377)
Q Consensus       107 ~~~~~~~~~~s~~~~~~~~~~-----~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~-----------~~~~~~~~~r~~  170 (377)
                      +..+|.++++|...++.+.+.     +...+.....++.+|+||+|.+.+.+.....           .....+..++++
T Consensus       208 ~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~  287 (476)
T cd03791         208 IVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEE  287 (476)
T ss_pred             HHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHH
Confidence            457899999999888776542     1112233557999999999998876543221           123446778999


Q ss_pred             hCCC--CCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcE
Q 017085          171 LGVR--NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRV  248 (377)
Q Consensus       171 ~~~~--~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v  248 (377)
                      +|++  ++.++|+++||+.++||++.+++++..+.+         .+++|+++|.|.+   .+.+.++++++++  .+++
T Consensus       288 ~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~---------~~~~lvi~G~g~~---~~~~~~~~~~~~~--~~~v  353 (476)
T cd03791         288 LGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLE---------LGGQLVILGSGDP---EYEEALRELAARY--PGRV  353 (476)
T ss_pred             cCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHH---------cCcEEEEEecCCH---HHHHHHHHHHHhC--CCcE
Confidence            9985  778999999999999999999999997754         4599999999842   3567777777765  4577


Q ss_pred             EEec-Cc-CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCc------ceeeecCCCCCh
Q 017085          249 HFVN-KT-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGT------TGLLHPVGKEGI  320 (377)
Q Consensus       249 ~~~g-~~-~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~------~g~~~~~~~~~~  320 (377)
                      .+.+ .. +.+..+|+.||++++||.  .|+||++++|||+||+|||+++.||+.|++.++.      +|+++++.|  +
T Consensus       354 ~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~--~  429 (476)
T cd03791         354 AVLIGYDEALAHLIYAGADFFLMPSR--FEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYN--A  429 (476)
T ss_pred             EEEEeCCHHHHHHHHHhCCEEECCCC--CCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCC--H
Confidence            7654 44 446789999999999999  9999999999999999999999999999999887      999999988  9


Q ss_pred             hHHHHHHHHHhh---CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 017085          321 TPLAKNIVKLAT---HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK  366 (377)
Q Consensus       321 ~~la~~i~~l~~---~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  366 (377)
                      ++++++|.++++   +++.+.++++++.+   +.|||+.+++++.++|+
T Consensus       430 ~~l~~~i~~~l~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~y~  475 (476)
T cd03791         430 DALLAALRRALALYRDPEAWRKLQRNAMA---QDFSWDRSAKEYLELYR  475 (476)
T ss_pred             HHHHHHHHHHHHHHcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHh
Confidence            999999999875   67777777777654   57999999999999996

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.9e-38  Score=290.85  Aligned_cols=282  Identities=24%  Similarity=0.294  Sum_probs=217.3

Q ss_pred             HhhhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeeccc------ccchhh--------hccccccceeeeecc
Q 017085           53 NTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGH------YFKLDY--------VKHLPLVAGAMIDSH  118 (377)
Q Consensus        53 ~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~------~~~~~~--------~~~~~~~~~~~~~s~  118 (377)
                      ....++|+||++....+.++....   .+   .+++++.|.....      .....+        ...++.+|.++++|.
T Consensus        90 ~~~~~~Dvi~~~~~~~~~~~~~~~---~~---~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~  163 (392)
T cd03805          90 LPDEKYDVFIVDQVSACVPLLKLF---SP---SKILFYCHFPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSN  163 (392)
T ss_pred             cccCCCCEEEEcCcchHHHHHHHh---cC---CcEEEEEecChHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcCh
Confidence            345789999998755443322111   11   4788888843211      111111        123567899999999


Q ss_pred             chhhHhhhhhhhhhhc-cCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHH
Q 017085          119 VTAEYWKNRTRERLRI-KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLH  197 (377)
Q Consensus       119 ~~~~~~~~~~~~~~~~-~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~  197 (377)
                      ...+.+.+    .++. ...++.+|+||+|.+.+.+....        ..++....+++.++++++||+.+.||++.+++
T Consensus       164 ~~~~~~~~----~~~~~~~~~~~vi~n~vd~~~~~~~~~~--------~~~~~~~~~~~~~~i~~~grl~~~Kg~~~ll~  231 (392)
T cd03805         164 FTASVFKK----TFPSLAKNPREVVYPCVDTDSFESTSED--------PDPGLLIPKSGKKTFLSINRFERKKNIALAIE  231 (392)
T ss_pred             hHHHHHHH----HhcccccCCcceeCCCcCHHHcCccccc--------ccccccccCCCceEEEEEeeecccCChHHHHH
Confidence            99888765    3332 23334699999998877543211        02233445577899999999999999999999


Q ss_pred             HHHHHHHHHhhhcccCCCeEEEEEecCCCc---ccHHHHHHHHHHHh-cCCCCcEEEecCc--CCHHHHHHhcCEEEecC
Q 017085          198 SFYESLELIKEKKLEVPSVHAVIIGSDMNA---QTKFESELRNYVMQ-KKIQDRVHFVNKT--LTVAPYLAAIDVLVQNS  271 (377)
Q Consensus       198 a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~---~~~~~~~l~~~~~~-~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps  271 (377)
                      ++.++.+..+    +.++++|+++|+++..   ...+.+++++.+++ +++.++|+|+|++  +++..+|+.||++++||
T Consensus       232 a~~~l~~~~~----~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l~~ad~~l~~s  307 (392)
T cd03805         232 AFAILKDKLA----EFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLLSSARALLYTP  307 (392)
T ss_pred             HHHHHHhhcc----cccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHHhhCeEEEECC
Confidence            9998765210    0168999999987532   12356788999999 9999999999997  56789999999999999


Q ss_pred             CCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHh
Q 017085          272 QAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEI  351 (377)
Q Consensus       272 ~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~  351 (377)
                      .  .|+||++++|||+||+|||+|+.++..|++.++.+|+++++ |  +++++++|.+++++++.+.++++++++.+.++
T Consensus       308 ~--~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~--~~~~a~~i~~l~~~~~~~~~~~~~a~~~~~~~  382 (392)
T cd03805         308 S--NEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-T--PEEFAEAMLKLANDPDLADRMGAAGRKRVKEK  382 (392)
T ss_pred             C--cCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-C--HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHh
Confidence            9  89999999999999999999999999999999889999875 6  89999999999999999999999999999999


Q ss_pred             cCHHHHHHHH
Q 017085          352 FQEHHMAERI  361 (377)
Q Consensus       352 f~~~~~~~~~  361 (377)
                      |+|+.+++++
T Consensus       383 ~s~~~~~~~~  392 (392)
T cd03805         383 FSTEAFAERL  392 (392)
T ss_pred             cCHHHHhhhC
Confidence            9999998764

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria

Probab=100.00  E-value=1.2e-37  Score=281.83  Aligned_cols=316  Identities=22%  Similarity=0.211  Sum_probs=244.4

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceE--E--------EccchhHHHhhhcccEEEEcCchhhhH
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--I--------SAKGQETINTALKADLIVLNTAVAGKW   71 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~~~~~~~~Div~~~~~~~~~~   71 (377)
                      ++++.|.++||+|++++...........     .....+..+  .        ........++..++|+||+|.......
T Consensus        19 ~~~~~L~~~g~~v~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~   93 (355)
T cd03799          19 REILALEAAGHEVEIFSLRPPEDTLVHP-----EDRAELARTRYLARSLALLAQALVLARELRRLGIDHIHAHFGTTPAT   93 (355)
T ss_pred             HHHHHHHhCCCeEEEEEecCcccccccc-----cccccccchHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCchHH
Confidence            5788999999999999966543211100     000000000  0        001122333558999999998654433


Q ss_pred             HHHHhhcCCCccccceeEEeeeecccccc--hhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhh
Q 017085           72 LDAVLKEDVPRVLPNVLWWIHEMRGHYFK--LDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKE  149 (377)
Q Consensus        72 ~~~~~~~~~~~~~~~~v~~~h~~~~~~~~--~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~  149 (377)
                      +........   ..+++++.|+.......  ......++.++.+++.|....+++.+    .++.+..++.++|||+|.+
T Consensus        94 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~s~~~~~~l~~----~~~~~~~~~~vi~~~~d~~  166 (355)
T cd03799          94 VAMLASRLG---GIPYSFTAHGKDIFRSPDAIDLDEKLARADFVVAISEYNRQQLIR----LLGCDPDKIHVVHCGVDLE  166 (355)
T ss_pred             HHHHHHHhc---CCCEEEEEecccccccCchHHHHHHHhhCCEEEECCHHHHHHHHH----hcCCCcccEEEEeCCcCHH
Confidence            333322211   35788888865332222  25556678899999999999888876    4466778999999999988


Q ss_pred             hHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCccc
Q 017085          150 LMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQT  229 (377)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~  229 (377)
                      .+....               .....+.+.++++|++.+.||++.+++++..+.+       +.++++++++|.+     
T Consensus       167 ~~~~~~---------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~-------~~~~~~l~i~G~~-----  219 (355)
T cd03799         167 RFPPRP---------------PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKD-------RGIDFRLDIVGDG-----  219 (355)
T ss_pred             HcCCcc---------------ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhh-------cCCCeEEEEEECC-----
Confidence            765332               0112566889999999999999999999997654       3378999999998     


Q ss_pred             HHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCC------CccchHHHHHHHcCCcEEEeCCCCcc
Q 017085          230 KFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWG------ECFGRITIEAMAFQLPVLGTAAGGTT  301 (377)
Q Consensus       230 ~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~------e~~~~~~~Ea~a~g~PvI~s~~~~~~  301 (377)
                      +..+.+++.++++++.++|.+.|+.  +++.++|+.||++++||.  .      |++|++++|||++|+|||+++.++..
T Consensus       220 ~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~--~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~  297 (355)
T cd03799         220 PLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSV--TAADGDREGLPVVLMEAMAMGLPVISTDVSGIP  297 (355)
T ss_pred             ccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEecce--ecCCCCccCccHHHHHHHHcCCCEEecCCCCcc
Confidence            4567888888899999999999997  789999999999999999  7      99999999999999999999999999


Q ss_pred             cceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 017085          302 EIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAER  360 (377)
Q Consensus       302 e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~  360 (377)
                      +++.++.+|++++++|  +++++++|.+++++++.+.++++++++.+.++|||+.++++
T Consensus       298 ~~i~~~~~g~~~~~~~--~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~  354 (355)
T cd03799         298 ELVEDGETGLLVPPGD--PEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAAR  354 (355)
T ss_pred             hhhhCCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence            9999988999999888  99999999999999999999999999999999999999875

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.

>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional

Probab=100.00  E-value=9.2e-38  Score=282.10  Aligned_cols=321  Identities=13%  Similarity=0.148  Sum_probs=231.7

Q ss_pred             cHhhHHHhc--CceEEEEEecCCCcchhHhhhhhh--hhcccCceEEE----ccchhHHHhhhcccEEEEcCchhhhHHH
Q 017085            2 ELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEH--KMWDRGVQVIS----AKGQETINTALKADLIVLNTAVAGKWLD   73 (377)
Q Consensus         2 ~la~~L~~~--G~eV~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~~Div~~~~~~~~~~~~   73 (377)
                      +++++|.++  ||+|++++........ .......  ......+....    ...+..++++.+||+||+|+..+..+..
T Consensus        22 ~l~~~L~~~~~g~~v~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~  100 (359)
T PRK09922         22 NVINTFEESKINCEMFFFCRNDKMDKA-WLKEIKYAQSFSNIKLSFLRRAKHVYNFSKWLKETQPDIVICIDVISCLYAN  100 (359)
T ss_pred             HHHHHhhhcCcceeEEEEecCCCCChH-HHHhcchhcccccchhhhhcccHHHHHHHHHHHhcCCCEEEEcCHHHHHHHH
Confidence            689999999  8999999865542211 1100100  00001111111    1234466778999999999876554333


Q ss_pred             HHhh-cCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHH
Q 017085           74 AVLK-EDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELME  152 (377)
Q Consensus        74 ~~~~-~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~  152 (377)
                      .+.. ...+   .+++.+.|.......... ...+..+|.++++|....+++.     .++++.+++.++|||+|.+.+.
T Consensus       101 ~~~~~~~~~---~~~~~~~h~~~~~~~~~~-~~~~~~~d~~i~~S~~~~~~~~-----~~~~~~~ki~vi~N~id~~~~~  171 (359)
T PRK09922        101 KARKKSGKQ---FKIFSWPHFSLDHKKHAE-CKKITCADYHLAISSGIKEQMM-----ARGISAQRISVIYNPVEIKTII  171 (359)
T ss_pred             HHHHHhCCC---CeEEEEecCcccccchhh-hhhhhcCCEEEEcCHHHHHHHH-----HcCCCHHHEEEEcCCCCHHHcc
Confidence            3222 1221   245566664322111111 1224788999999999888775     3467778899999999965432


Q ss_pred             HhhhhhhhhhhHHHHHHHhCCCCCCeEEEEecccc--ccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccH
Q 017085          153 VAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS--RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK  230 (377)
Q Consensus       153 ~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~--~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~  230 (377)
                      .....                ..++++++++||+.  +.||++.+++++..+.          ++++|+++|+|     +
T Consensus       172 ~~~~~----------------~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~----------~~~~l~ivG~g-----~  220 (359)
T PRK09922        172 IPPPE----------------RDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT----------GEWQLHIIGDG-----S  220 (359)
T ss_pred             CCCcc----------------cCCCcEEEEEEEEecccCcCHHHHHHHHHhhC----------CCeEEEEEeCC-----c
Confidence            11100                13467899999986  4699999999998651          47999999998     4


Q ss_pred             HHHHHHHHHHhcCCCCcEEEecCcC----CHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC-CCCccccee
Q 017085          231 FESELRNYVMQKKIQDRVHFVNKTL----TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA-AGGTTEIVV  305 (377)
Q Consensus       231 ~~~~l~~~~~~~~~~~~v~~~g~~~----~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~-~~~~~e~~~  305 (377)
                      ..+.+++.+++++++++|+|+|+++    ++.++|+.||++++||.  .||||++++||||||+|||+|+ .+|..|++.
T Consensus       221 ~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~--~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~  298 (359)
T PRK09922        221 DFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSALLLTSK--FEGFPMTLLEAMSYGIPCISSDCMSGPRDIIK  298 (359)
T ss_pred             cHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEEEECCc--ccCcChHHHHHHHcCCCEEEeCCCCChHHHcc
Confidence            5788999999999999999999873    46777888999999999  9999999999999999999999 899999999


Q ss_pred             cCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Q 017085          306 NGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK  370 (377)
Q Consensus       306 ~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  370 (377)
                      ++.+|++++++|  +++++++|.+++++++.+.   ..+.....++|+.+.+.+++.++|..+++
T Consensus       299 ~~~~G~lv~~~d--~~~la~~i~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (359)
T PRK09922        299 PGLNGELYTPGN--IDEFVGKLNKVISGEVKYQ---HDAIPNSIERFYEVLYFKNLNNALFSKLQ  358 (359)
T ss_pred             CCCceEEECCCC--HHHHHHHHHHHHhCcccCC---HHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence            999999999988  9999999999999997541   22333344668999999999999998765

>PRK14098 glycogen synthase; Provisional

Probab=100.00  E-value=1.2e-37  Score=288.86  Aligned_cols=294  Identities=17%  Similarity=0.145  Sum_probs=223.7

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcC---CCccccceeEEeeeecccc-cch-----------------------hhhcccc
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKED---VPRVLPNVLWWIHEMRGHY-FKL-----------------------DYVKHLP  108 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~h~~~~~~-~~~-----------------------~~~~~~~  108 (377)
                      .+|||||+|+-.++.....+....   ......|+|.|+|+..... +..                       ..+..+.
T Consensus       140 ~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~  219 (489)
T PRK14098        140 WKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVE  219 (489)
T ss_pred             CCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHH
Confidence            479999999844443222221111   0112368999999864210 000                       0111236


Q ss_pred             ccceeeeeccchhhHhhhhhhhhhhcc------CCCeEEEEcCChhhhHHHhhhhh-----------hhhhhHHHHHHHh
Q 017085          109 LVAGAMIDSHVTAEYWKNRTRERLRIK------MPDTYVVHLGNSKELMEVAEDNV-----------AKRVLREHVRESL  171 (377)
Q Consensus       109 ~~~~~~~~s~~~~~~~~~~~~~~~~~~------~~~~~vi~ngi~~~~~~~~~~~~-----------~~~~~~~~~r~~~  171 (377)
                      .+|.++++|...++.+.+.-...+|++      ..++.+|+||+|.+.|.+.....           .+...+..+++++
T Consensus       220 ~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~l  299 (489)
T PRK14098        220 HADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEV  299 (489)
T ss_pred             hcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHh
Confidence            789999999999887754211123332      67899999999999887643211           1223467788899


Q ss_pred             CCCC--CCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEE
Q 017085          172 GVRN--EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH  249 (377)
Q Consensus       172 ~~~~--~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~  249 (377)
                      |++.  +.++|+++||+.++||++.+++|+..+.+         .+++|+|+|+|..   .+.+.++++++++  +++|.
T Consensus       300 gl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~---------~~~~lvivG~G~~---~~~~~l~~l~~~~--~~~V~  365 (489)
T PRK14098        300 GLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE---------LDIQLVICGSGDK---EYEKRFQDFAEEH--PEQVS  365 (489)
T ss_pred             CCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh---------cCcEEEEEeCCCH---HHHHHHHHHHHHC--CCCEE
Confidence            9974  56899999999999999999999998754         5799999999842   3567888888877  46899


Q ss_pred             EecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceec----CcceeeecCCCCChhHH
Q 017085          250 FVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN----GTTGLLHPVGKEGITPL  323 (377)
Q Consensus       250 ~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~----~~~g~~~~~~~~~~~~l  323 (377)
                      |.|..  +++..+|++||++++||.  .|+||++.+|||++|+|+|+++.||+.|.+.+    +.+|+++++.|  +++|
T Consensus       366 ~~g~~~~~~~~~~~a~aDi~l~PS~--~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d--~~~l  441 (489)
T PRK14098        366 VQTEFTDAFFHLAIAGLDMLLMPGK--IESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYT--PEAL  441 (489)
T ss_pred             EEEecCHHHHHHHHHhCCEEEeCCC--CCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCCC--HHHH
Confidence            99976  457899999999999999  99999999999999999999999999988864    67999999988  9999


Q ss_pred             HHHHHHHh---hCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Q 017085          324 AKNIVKLA---THVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK  370 (377)
Q Consensus       324 a~~i~~l~---~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  370 (377)
                      +++|.+++   +|++.+.+++.++.   .++|||+.++++|+++|++++.
T Consensus       442 a~ai~~~l~~~~~~~~~~~~~~~~~---~~~fsw~~~a~~y~~lY~~~~~  488 (489)
T PRK14098        442 VAKLGEALALYHDEERWEELVLEAM---ERDFSWKNSAEEYAQLYRELLG  488 (489)
T ss_pred             HHHHHHHHHHHcCHHHHHHHHHHHh---cCCCChHHHHHHHHHHHHHHhc
Confidence            99999865   57887777776653   4789999999999999999874

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=7e-37  Score=277.15  Aligned_cols=309  Identities=17%  Similarity=0.183  Sum_probs=231.4

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEc-----------cchhHHHhhhcccEEEEcCchhhh
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA-----------KGQETINTALKADLIVLNTAVAGK   70 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~Div~~~~~~~~~   70 (377)
                      +++++|.+.||+|++++.......      ........++.++..           .....+++..+||+||+|......
T Consensus        20 ~l~~~L~~~~~~v~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~~~~~~   93 (358)
T cd03812          20 NYYRNLDRSKIQFDFLVTSKEEGD------YDDEIEKLGGKIYYIPARKKNPLKYFKKLYKLIKKNKYDIVHVHGSSASG   93 (358)
T ss_pred             HHHHhcCccceEEEEEEeCCCCcc------hHHHHHHcCCeEEEecCCCccHHHHHHHHHHHHhcCCCCEEEEeCcchhH
Confidence            578999989999999997654321      112222334444321           123334467899999999876433


Q ss_pred             HHHHHhhcCCCccccceeEEeeeeccccc--chh------hhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEE
Q 017085           71 WLDAVLKEDVPRVLPNVLWWIHEMRGHYF--KLD------YVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVV  142 (377)
Q Consensus        71 ~~~~~~~~~~~~~~~~~v~~~h~~~~~~~--~~~------~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi  142 (377)
                      +...+... .  ..+.++.+.|.......  ...      .......++.++++|....+++...      .+..++.+|
T Consensus        94 ~~~~~~~~-~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~------~~~~~~~vi  164 (358)
T cd03812          94 FILLAAKK-A--GVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFGK------VKNKKFKVI  164 (358)
T ss_pred             HHHHHHhh-C--CCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHhC------CCcccEEEE
Confidence            33322221 1  12345677776542211  111      1223467889999999888776542      356789999


Q ss_pred             EcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEe
Q 017085          143 HLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIG  222 (377)
Q Consensus       143 ~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G  222 (377)
                      |||+|...+......      +.. ++..+..+++++|+++||+.+.||++.+++++..+.+       +.++++++|+|
T Consensus       165 ~ngvd~~~~~~~~~~------~~~-~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~-------~~~~~~l~ivG  230 (358)
T cd03812         165 PNGIDLEKFIFNEEI------RKK-RRELGILEDKFVIGHVGRFSEQKNHEFLIEIFAELLK-------KNPNAKLLLVG  230 (358)
T ss_pred             eccCcHHHcCCCchh------hhH-HHHcCCCCCCEEEEEEeccccccChHHHHHHHHHHHH-------hCCCeEEEEEe
Confidence            999999876543211      111 5567777888999999999999999999999998765       44899999999


Q ss_pred             cCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCccc
Q 017085          223 SDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTE  302 (377)
Q Consensus       223 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e  302 (377)
                      +|     +..+.+++.++++++.++|.++|+.+++.++|+.||++++||.  .|++|++++|||++|+|||+|+.++..+
T Consensus       231 ~g-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ps~--~E~~~~~~lEAma~G~PvI~s~~~~~~~  303 (358)
T cd03812         231 DG-----ELEEEIKKKVKELGLEDKVIFLGVRNDVPELLQAMDVFLFPSL--YEGLPLVLIEAQASGLPCILSDTITKEV  303 (358)
T ss_pred             CC-----chHHHHHHHHHhcCCCCcEEEecccCCHHHHHHhcCEEEeccc--ccCCCHHHHHHHHhCCCEEEEcCCchhh
Confidence            98     4667888888899999999999998999999999999999999  8999999999999999999999999999


Q ss_pred             ceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q 017085          303 IVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVK  349 (377)
Q Consensus       303 ~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~  349 (377)
                      ++.+ +.|++...++  +++++++|.++++|++.++.+...+.....
T Consensus       304 ~i~~-~~~~~~~~~~--~~~~a~~i~~l~~~~~~~~~~~~~~~~~~~  347 (358)
T cd03812         304 DLTD-LVKFLSLDES--PEIWAEEILKLKSEDRRERSSESIKKKGLD  347 (358)
T ss_pred             hhcc-CccEEeCCCC--HHHHHHHHHHHHhCcchhhhhhhhhhccch
Confidence            9987 4666666655  899999999999999998888887766443

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).

>PLN00142 sucrose synthase

Probab=100.00  E-value=8.3e-37  Score=288.55  Aligned_cols=295  Identities=16%  Similarity=0.172  Sum_probs=212.6

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecc-------ccc---chh---------hhccccccceeeee
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRG-------HYF---KLD---------YVKHLPLVAGAMID  116 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~-------~~~---~~~---------~~~~~~~~~~~~~~  116 (377)
                      .+||+||+|...++.....+... .   ..|.+.+.|....       .++   ...         -...+..+|.+++.
T Consensus       407 ~~PDlIHaHYwdsg~vA~~La~~-l---gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIas  482 (815)
T PLN00142        407 GKPDLIIGNYSDGNLVASLLAHK-L---GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITS  482 (815)
T ss_pred             CCCCEEEECCccHHHHHHHHHHH-h---CCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHhC
Confidence            35999999976665443333321 1   2588899995421       000   000         12233577778877


Q ss_pred             ccchhhHhhhhh--------------hh-hhhc--cCCCeEEEEcCChhhhHHHhhhhhhh-----------hhhHHHHH
Q 017085          117 SHVTAEYWKNRT--------------RE-RLRI--KMPDTYVVHLGNSKELMEVAEDNVAK-----------RVLREHVR  168 (377)
Q Consensus       117 s~~~~~~~~~~~--------------~~-~~~~--~~~~~~vi~ngi~~~~~~~~~~~~~~-----------~~~~~~~r  168 (377)
                      +...........              .+ --|+  ..+++.|||+|+|...|.+.......           .....+.+
T Consensus       483 T~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~  562 (815)
T PLN00142        483 TYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQND  562 (815)
T ss_pred             cHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHH
Confidence            754432111000              00 0122  25689999999999877643211100           01122334


Q ss_pred             HHhCC--CCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCC-Cc---cc---HHHHHHHHHH
Q 017085          169 ESLGV--RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDM-NA---QT---KFESELRNYV  239 (377)
Q Consensus       169 ~~~~~--~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~-~~---~~---~~~~~l~~~~  239 (377)
                      +.+|+  +++.++|+++||+.+.||++.+++|+.++.+       ..++++|+|+|++. +.   ..   ...+++.+++
T Consensus       563 e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~-------l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La  635 (815)
T PLN00142        563 EHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKR-------LRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLI  635 (815)
T ss_pred             HHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHH-------hCCCcEEEEEECCccccccccHHHHHHHHHHHHHH
Confidence            56775  4566789999999999999999999987643       22679999999872 11   11   1235678889


Q ss_pred             HhcCCCCcEEEecCc------CCHHHHHH-hcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceee
Q 017085          240 MQKKIQDRVHFVNKT------LTVAPYLA-AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLL  312 (377)
Q Consensus       240 ~~~~~~~~v~~~g~~------~~~~~~~~-~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~  312 (377)
                      +++++.++|.|+|.+      .++..+++ ++|++++||.  .|+||++++|||+||+|||+|+.||..|++.++.+|++
T Consensus       636 ~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~--~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~L  713 (815)
T PLN00142        636 EKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFH  713 (815)
T ss_pred             HHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEE
Confidence            999999999999864      24555555 4799999999  99999999999999999999999999999999999999


Q ss_pred             ecCCCCChhHHHHHHHHH----hhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017085          313 HPVGKEGITPLAKNIVKL----ATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL  365 (377)
Q Consensus       313 ~~~~~~~~~~la~~i~~l----~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~  365 (377)
                      +++.|  +++++++|.++    ++|++.+.+|+++|++++.++|||+.+++++.++.
T Consensus       714 V~P~D--~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~  768 (815)
T PLN00142        714 IDPYH--GDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG  768 (815)
T ss_pred             eCCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            99998  99999998764    47999999999999999999999999999999864

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.2e-36  Score=278.90  Aligned_cols=326  Identities=13%  Similarity=0.065  Sum_probs=225.3

Q ss_pred             CcHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEccch-------------------------hHHHhh
Q 017085            1 MELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ-------------------------ETINTA   55 (377)
Q Consensus         1 ~~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~   55 (377)
                      +++|+.|.++||+|+|++.........       .....|+.++.....                         ..+++.
T Consensus        21 ~~~a~~L~~~G~~V~ii~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   93 (415)
T cd03816          21 QYHALSLAKHGWKVDLVGYLETPPHDE-------ILSNPNITIHPLPPPPQRLNKLPFLLFAPLKVLWQFFSLLWLLYKL   93 (415)
T ss_pred             HHHHHHHHhcCceEEEEEecCCCCCHH-------HhcCCCEEEEECCCCccccccchHHHHHHHHHHHHHHHHHHHHHhc
Confidence            368999999999999999765332111       012334444332110                         112345


Q ss_pred             hcccEEEEcCchhh--hHHHHHhhcCCCccccceeEEeeeecccc----------c----chhhhccccccceeeeeccc
Q 017085           56 LKADLIVLNTAVAG--KWLDAVLKEDVPRVLPNVLWWIHEMRGHY----------F----KLDYVKHLPLVAGAMIDSHV  119 (377)
Q Consensus        56 ~~~Div~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~h~~~~~~----------~----~~~~~~~~~~~~~~~~~s~~  119 (377)
                      .+||+||+|.+...  .++..+....   ..+|++.+.|+.+...          .    .......++.+|.++++|..
T Consensus        94 ~~~Dvi~~~~~~~~~~~~~a~~~~~~---~~~~~V~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~  170 (415)
T cd03816          94 RPADYILIQNPPSIPTLLIAWLYCLL---RRTKLIIDWHNYGYTILALKLGENHPLVRLAKWYEKLFGRLADYNLCVTKA  170 (415)
T ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHH---hCCeEEEEcCCchHHHHhcccCCCCHHHHHHHHHHHHHhhcCCEeeecCHH
Confidence            68999999875422  1112111111   1257888899863210          0    00112334678999999999


Q ss_pred             hhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHH-------------HhCC-CCCCeEEEEecc
Q 017085          120 TAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRE-------------SLGV-RNEDLLFAIINS  185 (377)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~-------------~~~~-~~~~~~i~~~G~  185 (377)
                      +.+++.     .++.+.+++.|||||. ...|.+.+....    ....++             ..++ +++..+++++||
T Consensus       171 ~~~~l~-----~~~~~~~ki~vI~Ng~-~~~f~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~gr  240 (415)
T cd03816         171 MKEDLQ-----QFNNWKIRATVLYDRP-PEQFRPLPLEEK----HELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTS  240 (415)
T ss_pred             HHHHHH-----hhhccCCCeeecCCCC-HHHceeCcHHHH----HHHHHhccccccccccccccceecCCCceEEEEecc
Confidence            988875     3567889999999995 444443221110    111110             1122 244567888999


Q ss_pred             ccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHh
Q 017085          186 VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAA  263 (377)
Q Consensus       186 ~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~  263 (377)
                      +.+.||++.+++|+..+.+...+. ..+++++|+|+|+|     +..++++++++++++++.+.+.|+.  +++.++|++
T Consensus       241 l~~~K~~~~li~A~~~l~~~~~~~-~~~~~i~l~ivG~G-----~~~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~  314 (415)
T cd03816         241 WTPDEDFGILLDALVAYEKSAATG-PKLPKLLCIITGKG-----PLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLAS  314 (415)
T ss_pred             ccCCCCHHHHHHHHHHHHHhhccc-ccCCCEEEEEEecC-----ccHHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHh
Confidence            999999999999999875422110 02368999999998     4678999999999997544455654  889999999


Q ss_pred             cCEEEecCCC-CCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhC---HHHHHH
Q 017085          264 IDVLVQNSQA-WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH---VERRLT  339 (377)
Q Consensus       264 adv~l~ps~~-~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~---~~~~~~  339 (377)
                      ||++++|+.. ..+++|++++||||||+|||+|+.++..|++.++.+|++++  |  +++++++|.++++|   ++.+.+
T Consensus       315 aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d--~~~la~~i~~ll~~~~~~~~~~~  390 (415)
T cd03816         315 ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--D--SEELAEQLIDLLSNFPNRGKLNS  390 (415)
T ss_pred             CCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--C--HHHHHHHHHHHHhcCCCHHHHHH
Confidence            9999975431 14789999999999999999999999999999999999984  5  99999999999999   999999


Q ss_pred             HHHHHHHHHHHhcCHHHHH
Q 017085          340 MGKRGYERVKEIFQEHHMA  358 (377)
Q Consensus       340 ~~~~~~~~~~~~f~~~~~~  358 (377)
                      |++++++...  ++|+..-
T Consensus       391 m~~~~~~~~~--~~~~~~~  407 (415)
T cd03816         391 LKKGAQEESE--LRWDENW  407 (415)
T ss_pred             HHHHHHHhhh--cCHHHHH
Confidence            9999998763  5555443

The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=9.5e-37  Score=276.98  Aligned_cols=306  Identities=21%  Similarity=0.230  Sum_probs=235.6

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEccchhHHHhhhcccEEEEcCchhhhHHHHHhhcCCC
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVP   81 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~   81 (377)
                      +++++|.++||+|++++....                         .+....+..+||+||+|......+....+.... 
T Consensus        21 ~l~~~l~~~G~~v~v~~~~~~-------------------------~~~~~~~~~~~diih~~~~~~~~~~~~~~~~~~-   74 (365)
T cd03825          21 RLHRALQAAGVDSTMLVQEKK-------------------------ALISKIEIINADIVHLHWIHGGFLSIEDLSKLL-   74 (365)
T ss_pred             HHHHHHHhcCCceeEEEeecc-------------------------hhhhChhcccCCEEEEEccccCccCHHHHHHHH-
Confidence            588999999999999997753                         233345678899999987543322221111111 


Q ss_pred             ccccceeEEeeeecccccc------------------------------hhh---hccc-cccceeeeeccchhhHhhhh
Q 017085           82 RVLPNVLWWIHEMRGHYFK------------------------------LDY---VKHL-PLVAGAMIDSHVTAEYWKNR  127 (377)
Q Consensus        82 ~~~~~~v~~~h~~~~~~~~------------------------------~~~---~~~~-~~~~~~~~~s~~~~~~~~~~  127 (377)
                       ...|+++++|+.......                              ..+   ...+ ...+.++++|....+.+.+ 
T Consensus        75 -~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~-  152 (365)
T cd03825          75 -DRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARS-  152 (365)
T ss_pred             -cCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHh-
Confidence             135899999986421100                              000   0011 2345688888877777654 


Q ss_pred             hhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccc--cchhHHHHHHHHHHHHH
Q 017085          128 TRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR--GKGQDLFLHSFYESLEL  205 (377)
Q Consensus       128 ~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~--~Kg~~~ll~a~~~l~~~  205 (377)
                         .+.++..++.++|||+|.+.+.+..        +...++.++++++..+++++|+...  .||++.+++++..+.+.
T Consensus       153 ---~~~~~~~~~~vi~ngi~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~  221 (365)
T cd03825         153 ---SSLFKGIPIEVIPNGIDTTIFRPRD--------KREARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAER  221 (365)
T ss_pred             ---ccccCCCceEEeCCCCcccccCCCc--------HHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhc
Confidence               3446678999999999988764332        3456778888888888877777655  89999999999876431


Q ss_pred             HhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcC---CHHHHHHhcCEEEecCCCCCCccchHH
Q 017085          206 IKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL---TVAPYLAAIDVLVQNSQAWGECFGRIT  282 (377)
Q Consensus       206 l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~---~~~~~~~~adv~l~ps~~~~e~~~~~~  282 (377)
                            ..++++++++|++...     ..       .++.+++.++|+.+   ++..+|+.||++++||.  .|++|+++
T Consensus       222 ------~~~~~~~~i~G~~~~~-----~~-------~~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~--~e~~g~~~  281 (365)
T cd03825         222 ------WKDDIELVVFGASDPE-----IP-------PDLPFPVHYLGSLNDDESLALIYSAADVFVVPSL--QENFPNTA  281 (365)
T ss_pred             ------cCCCeEEEEeCCCchh-----hh-------ccCCCceEecCCcCCHHHHHHHHHhCCEEEeccc--cccccHHH
Confidence                  0378999999998421     11       14457899999974   58899999999999999  99999999


Q ss_pred             HHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 017085          283 IEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIA  362 (377)
Q Consensus       283 ~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~  362 (377)
                      +|||++|+|||+++.++..|++.++.+|++++..|  +++++++|.+++++++.+.++++++++.+.++|||+.+++++.
T Consensus       282 ~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~--~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  359 (365)
T cd03825         282 IEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGD--PEDLAEGIEWLLADPDEREELGEAARELAENEFDSRVQAKRYL  359 (365)
T ss_pred             HHHHhcCCCEEEecCCCChhheeCCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            99999999999999999999999888999999888  9999999999999999999999999999999999999999999


Q ss_pred             HHHHHH
Q 017085          363 VVLKEV  368 (377)
Q Consensus       363 ~~~~~~  368 (377)
                      ++|+++
T Consensus       360 ~~y~~~  365 (365)
T cd03825         360 SLYEEL  365 (365)
T ss_pred             HHHhhC
Confidence            999863

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.3e-36  Score=274.39  Aligned_cols=334  Identities=19%  Similarity=0.161  Sum_probs=235.3

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEccchhHHHhhhcccEEEEcCchh--hhHHHHHhhcC
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVA--GKWLDAVLKED   79 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~--~~~~~~~~~~~   79 (377)
                      +|+++|.+.||+|++++..................................++..+||+||++....  ...........
T Consensus        21 ~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~  100 (366)
T cd03822          21 DLVNALSARGPDVLVVSVAALYPSLLYGGEQEVVRVIVLDNPLDYRRAARAIRLSGPDVVVIQHEYGIFGGEAGLYLLLL  100 (366)
T ss_pred             HHHHHhhhcCCeEEEEEeecccCcccCCCcccceeeeecCCchhHHHHHHHHhhcCCCEEEEeeccccccchhhHHHHHH
Confidence            6899999999999999965443221111000000000000001112334556778999999987221  11111111111


Q ss_pred             CCccccceeEEeeeeccc----ccchhhhccccccceeeeec-cchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHh
Q 017085           80 VPRVLPNVLWWIHEMRGH----YFKLDYVKHLPLVAGAMIDS-HVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVA  154 (377)
Q Consensus        80 ~~~~~~~~v~~~h~~~~~----~~~~~~~~~~~~~~~~~~~s-~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~  154 (377)
                      ......|++++.|+....    .........++.+|.+++.| ....+.+..       ....++.++|||++...+...
T Consensus       101 ~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-------~~~~~~~~i~~~~~~~~~~~~  173 (366)
T cd03822         101 LRGLGIPVVVTLHTVLLHEPRPGDRALLRLLLRRADAVIVMSSELLRALLLR-------AYPEKIAVIPHGVPDPPAEPP  173 (366)
T ss_pred             HhhcCCCEEEEEecCCccccchhhhHHHHHHHhcCCEEEEeeHHHHHHHHhh-------cCCCcEEEeCCCCcCcccCCc
Confidence            112236899999996211    11223344567899999997 222222221       114689999999987765432


Q ss_pred             hhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHH
Q 017085          155 EDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESE  234 (377)
Q Consensus       155 ~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~  234 (377)
                      ..           .++...+.+.++++++|++.+.||++.+++++..+.+       +.++++|+++|++.+........
T Consensus       174 ~~-----------~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~-------~~~~~~l~i~G~~~~~~~~~~~~  235 (366)
T cd03822         174 ES-----------LKALGGLDGRPVLLTFGLLRPYKGLELLLEALPLLVA-------KHPDVRLLVAGETHPDLERYRGE  235 (366)
T ss_pred             hh-----------hHhhcCCCCCeEEEEEeeccCCCCHHHHHHHHHHHHh-------hCCCeEEEEeccCccchhhhhhh
Confidence            11           1334445677899999999999999999999997755       34789999999975432111111


Q ss_pred             HHHHHHhcCCCCcEEEecC-c--CCHHHHHHhcCEEEecCCCCCC--ccchHHHHHHHcCCcEEEeCCCCcccceecCcc
Q 017085          235 LRNYVMQKKIQDRVHFVNK-T--LTVAPYLAAIDVLVQNSQAWGE--CFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTT  309 (377)
Q Consensus       235 l~~~~~~~~~~~~v~~~g~-~--~~~~~~~~~adv~l~ps~~~~e--~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~  309 (377)
                      ..++++++++.++|.|+|. .  +++.++|+.||++++||.  .|  ++|++++|||++|+|||+++.++ .+.+.++.+
T Consensus       236 ~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~--~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~  312 (366)
T cd03822         236 AYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYR--SADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGT  312 (366)
T ss_pred             hHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEeccc--ccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCC
Confidence            1134788899999999987 4  789999999999999999  88  99999999999999999999999 666777889


Q ss_pred             eeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 017085          310 GLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK  366 (377)
Q Consensus       310 g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  366 (377)
                      |++++++|  +++++++|..++++++.+.++++++++.+.+ |||+.+++++.++|+
T Consensus       313 g~~~~~~d--~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~  366 (366)
T cd03822         313 GLLVPPGD--PAALAEAIRRLLADPELAQALRARAREYARA-MSWERVAERYLRLLA  366 (366)
T ss_pred             cEEEcCCC--HHHHHHHHHHHHcChHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHhC
Confidence            99999988  9999999999999999999999999998877 999999999999874

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.1e-36  Score=274.99  Aligned_cols=329  Identities=19%  Similarity=0.172  Sum_probs=236.8

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhh-----hhhcc--cC-ce-EEE-ccchhHHHhhhcccEEEEcCchhhhH
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLE-----HKMWD--RG-VQ-VIS-AKGQETINTALKADLIVLNTAVAGKW   71 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~-----~~~~~--~~-~~-~~~-~~~~~~~~~~~~~Div~~~~~~~~~~   71 (377)
                      +|+++|.+.||+|++++...............     .....  .. .. ... ...........++|+||+|+......
T Consensus        22 ~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~  101 (375)
T cd03821          22 NLSKALAKLGHEVTVATTDAGGDPLLVALNGVPVKLFSINVAYGLNLARYLFPPSLLAWLRLNIREADIVHVHGLWSYPS  101 (375)
T ss_pred             HHHHHHHhcCCcEEEEecCCCCccchhhccCceeeecccchhhhhhhhhhccChhHHHHHHHhCCCCCEEEEecccchHH
Confidence            68999999999999999765542221110000     00000  00 00 000 00112223446899999998543222


Q ss_pred             HHHHhhcCCCccccceeEEeeeeccccc--chh----------hhccccccceeeeeccchhhHhhhhhhhhhhccCCCe
Q 017085           72 LDAVLKEDVPRVLPNVLWWIHEMRGHYF--KLD----------YVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDT  139 (377)
Q Consensus        72 ~~~~~~~~~~~~~~~~v~~~h~~~~~~~--~~~----------~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  139 (377)
                      .......  +....|++++.|+....+.  ...          .......++.+++.+.........      +.+..++
T Consensus       102 ~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~------~~~~~~~  173 (375)
T cd03821         102 LAAARAA--RKYGIPYVVSPHGMLDPWALPHKALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR------LGLKAPI  173 (375)
T ss_pred             HHHHHHH--HHhCCCEEEEccccccccccccchhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh------hCCcccE
Confidence            2221111  1123578888997644332  100          112234567777777554443332      2355789


Q ss_pred             EEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEE
Q 017085          140 YVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAV  219 (377)
Q Consensus       140 ~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~  219 (377)
                      .++|||+|.+.+......       .. |+.++.+++.++++++|++.+.||++.+++++..+.+       +.++++|+
T Consensus       174 ~vi~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~-------~~~~~~l~  238 (375)
T cd03821         174 AVIPNGVDIPPFAALPSR-------GR-RRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAE-------RFPDWHLV  238 (375)
T ss_pred             EEcCCCcChhccCcchhh-------hh-hhhccCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhh-------hcCCeEEE
Confidence            999999998876543211       11 6777788889999999999999999999999997765       34789999


Q ss_pred             EEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCC
Q 017085          220 IIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA  297 (377)
Q Consensus       220 i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~  297 (377)
                      ++|.+..   .+...++..++++++.++|+|+|++  +++.++|+.||++++||.  .|++|++++|||++|+|||+++.
T Consensus       239 i~G~~~~---~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~  313 (375)
T cd03821         239 IAGPDEG---GYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSH--SENFGIVVAEALACGTPVVTTDK  313 (375)
T ss_pred             EECCCCc---chHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEEeccc--cCCCCcHHHHHHhcCCCEEEcCC
Confidence            9998643   2455566666889999999999998  489999999999999999  89999999999999999999999


Q ss_pred             CCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 017085          298 GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIA  362 (377)
Q Consensus       298 ~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~  362 (377)
                      ++..+++.+ ..|++++.+   .++++++|.+++++++.+.++++++++.+.++|+|+.+++++.
T Consensus       314 ~~~~~~~~~-~~~~~~~~~---~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  374 (375)
T cd03821         314 VPWQELIEY-GCGWVVDDD---VDALAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQQLL  374 (375)
T ss_pred             CCHHHHhhc-CceEEeCCC---hHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence            999999988 788888753   6999999999999999999999999999899999999999875

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3e-36  Score=272.86  Aligned_cols=313  Identities=26%  Similarity=0.264  Sum_probs=235.4

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEc-------------cchhHH-HhhhcccEEEEcCch
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA-------------KGQETI-NTALKADLIVLNTAV   67 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~-~~~~~~Div~~~~~~   67 (377)
                      +|+++|.++||+|++++...........        ..+..+...             .....+ ....+||+||+|.+.
T Consensus        22 ~l~~~L~~~g~~v~v~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~   93 (357)
T cd03795          22 DLAEGLAARGIEVAVLCASPEPKGRDEE--------RNGHRVIRAPSLLNVASTPFSPSFFKQLKKLAKKADVIHLHFPN   93 (357)
T ss_pred             HHHHHHHhCCCceEEEecCCCCcchhhh--------ccCceEEEeecccccccccccHHHHHHHHhcCCCCCEEEEecCc
Confidence            6899999999999999976543222111        011111110             001111 346789999999876


Q ss_pred             hhhHHHHHhhcCCCccccceeEEeeeeccc------ccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEE
Q 017085           68 AGKWLDAVLKEDVPRVLPNVLWWIHEMRGH------YFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYV  141 (377)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~------~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~v  141 (377)
                      ...........    ...+.+.+.|+....      .+.......+..+|.+++.|....+.+..    ..+. ..++.+
T Consensus        94 ~~~~~~~~~~~----~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~----~~~~-~~~~~~  164 (357)
T cd03795          94 PLADLALLLLP----RKKPVVVHWHSDIVKQKLLLKLYRPLQRRFLRRADAIVATSPNYAETSPV----LRRF-RDKVRV  164 (357)
T ss_pred             chHHHHHHHhc----cCceEEEEEcChhhccchhhhhhhHHHHHHHHhcCEEEeCcHHHHHHHHH----hcCC-ccceEE
Confidence            44333222221    224777888854211      12222334567899999999988876653    2222 378999


Q ss_pred             EEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEE
Q 017085          142 VHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII  221 (377)
Q Consensus       142 i~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~  221 (377)
                      +|||++...+......      +   ......+.+.++++++||+.+.||++.+++++.++           .+++++++
T Consensus       165 i~~gi~~~~~~~~~~~------~---~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l-----------~~~~l~i~  224 (357)
T cd03795         165 IPLGLDPARYPRPDAL------E---EAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAAL-----------PDAPLVIV  224 (357)
T ss_pred             ecCCCChhhcCCcchh------h---hHhhcCCCCCcEEEEecccccccCHHHHHHHHHhc-----------cCcEEEEE
Confidence            9999998876543211      0   02233456778999999999999999999999865           37999999


Q ss_pred             ecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC
Q 017085          222 GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG  299 (377)
Q Consensus       222 G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~  299 (377)
                      |+|     +....+++.+++++..++|+|+|++  +++.++|+.||++++||....|++|++++|||++|+|||+++.++
T Consensus       225 G~g-----~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~  299 (357)
T cd03795         225 GEG-----PLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGT  299 (357)
T ss_pred             eCC-----hhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCC
Confidence            998     4677888888889999999999997  568999999999999996336999999999999999999999999


Q ss_pred             cccceec-CcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHH
Q 017085          300 TTEIVVN-GTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMA  358 (377)
Q Consensus       300 ~~e~~~~-~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~  358 (377)
                      ..+.+.+ +.+|++++++|  +++++++|.++++|++.+.+|++++++.+.++|||+.++
T Consensus       300 ~~~~i~~~~~~g~~~~~~d--~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~  357 (357)
T cd03795         300 GGSYVNLHGVTGLVVPPGD--PAALAEAIRRLLEDPELRERLGEAARERAEEEFTADRMV  357 (357)
T ss_pred             chhHHhhCCCceEEeCCCC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHhcchHhhC
Confidence            9998876 88999999888  999999999999999999999999999999999999874

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

Probab=100.00  E-value=8.4e-36  Score=270.16  Aligned_cols=332  Identities=25%  Similarity=0.265  Sum_probs=255.1

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceE--------EEccchhHHHhhhcccEEEEcCchhhhHHH
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--------ISAKGQETINTALKADLIVLNTAVAGKWLD   73 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~Div~~~~~~~~~~~~   73 (377)
                      +|+++|.+.||+|++++.........................        ........+++..+||+||++.........
T Consensus        22 ~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~  101 (374)
T cd03801          22 ELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRPPPLLRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAA  101 (374)
T ss_pred             HHHHHHHhcCceEEEEecCCCCCCceeeecCcceecCCcccccchhHHHHHHHHHHHHHhhhcCCcEEEEechhHHHHHH
Confidence            588999999999999997655322211100000000000000        011233445567899999999876554433


Q ss_pred             HHhhcCCCccccceeEEeeeeccccc-----------chhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEE
Q 017085           74 AVLKEDVPRVLPNVLWWIHEMRGHYF-----------KLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVV  142 (377)
Q Consensus        74 ~~~~~~~~~~~~~~v~~~h~~~~~~~-----------~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi  142 (377)
                      ....  .  ...|++++.|+......           .......+..+|.+++.|....+.+.+    .++.+..++.++
T Consensus       102 ~~~~--~--~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~----~~~~~~~~~~~i  173 (374)
T cd03801         102 LAAR--L--LGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELRE----LGGVPPEKITVI  173 (374)
T ss_pred             HHHH--h--cCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHh----cCCCCCCcEEEe
Confidence            1111  1  12588999998764332           122334557889999999999888775    444444689999


Q ss_pred             EcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEe
Q 017085          143 HLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIG  222 (377)
Q Consensus       143 ~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G  222 (377)
                      |||++...+....         ...+.......+.++++++|++.+.||++.+++++..+.+       +.++++|+++|
T Consensus       174 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~-------~~~~~~l~i~G  237 (374)
T cd03801         174 PNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALAKLRK-------EYPDVRLVIVG  237 (374)
T ss_pred             cCcccccccCccc---------hHHHhhcCCcCCCeEEEEecchhhhcCHHHHHHHHHHHhh-------hcCCeEEEEEe
Confidence            9999987654321         1223344455677899999999999999999999997754       33789999999


Q ss_pred             cCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCc
Q 017085          223 SDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGT  300 (377)
Q Consensus       223 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~  300 (377)
                      ++     .....+++.+++++..++|.+.|+.  +++.++|+.||++++|+.  .+++|++++|||++|+|||+++.++.
T Consensus       238 ~~-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~--~~~~~~~~~Ea~~~g~pvI~~~~~~~  310 (374)
T cd03801         238 DG-----PLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSL--YEGFGLVLLEAMAAGLPVVASDVGGI  310 (374)
T ss_pred             Cc-----HHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecch--hccccchHHHHHHcCCcEEEeCCCCh
Confidence            77     5778888888888999999999998  899999999999999999  89999999999999999999999999


Q ss_pred             ccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 017085          301 TEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK  366 (377)
Q Consensus       301 ~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  366 (377)
                      .+++.++.+|+++++.|  +++++++|.+++++++.+.+++.++++.+.++|+|+.+++++.++|+
T Consensus       311 ~~~~~~~~~g~~~~~~~--~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (374)
T cd03801         311 PEVVEDGETGLLVPPGD--PEALAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAARTEEVYY  374 (374)
T ss_pred             hHHhcCCcceEEeCCCC--HHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence            99999889999999988  99999999999999999999999999889999999999999999873

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1e-35  Score=268.64  Aligned_cols=314  Identities=22%  Similarity=0.279  Sum_probs=238.1

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEc----------------cchhHHHhhhcccEEEEcC
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA----------------KGQETINTALKADLIVLNT   65 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~Div~~~~   65 (377)
                      +++++|.+.||+|++++.......         .....++.+...                ..+..+++..+||+||++.
T Consensus        18 ~l~~~L~~~g~~v~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~~~~   88 (359)
T cd03808          18 PLIKALRAAGYEVHVVAPPGDELE---------ELEALGVKVIPIPLDRRGINPFKDLKALLRLYRLLRKERPDIVHTHT   88 (359)
T ss_pred             HHHHHHHhcCCeeEEEecCCCccc---------ccccCCceEEeccccccccChHhHHHHHHHHHHHHHhcCCCEEEEcc
Confidence            588999999999999997654321         111223332211                1233445668999999997


Q ss_pred             chhhhHHHHHhhcCCCccccceeEEeeeecccccc---------hhhhccccccceeeeeccchhhHhhhhhhhhhhcc-
Q 017085           66 AVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK---------LDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIK-  135 (377)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~---------~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~-  135 (377)
                      ..+..+.......   ...++++++.|+.......         ......++.+|.+++.|....+.+.+.    ...+ 
T Consensus        89 ~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~----~~~~~  161 (359)
T cd03808          89 PKPGILGRLAARL---AGVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKL----GIIKK  161 (359)
T ss_pred             ccchhHHHHHHHH---cCCCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHh----cCCCc
Confidence            6554333322221   1125677777775432211         112334567899999999998877652    2222 


Q ss_pred             CCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCC
Q 017085          136 MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPS  215 (377)
Q Consensus       136 ~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~  215 (377)
                      ..++.+.++|++...+......               .+++.++++++|++.+.||++.+++++..+.+       +.++
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~-------~~~~  219 (359)
T cd03808         162 KKTVLIPGSGVDLDRFSPSPEP---------------IPEDDPVFLFVARLLKDKGIDELLEAARILKA-------KGPN  219 (359)
T ss_pred             CceEEecCCCCChhhcCccccc---------------cCCCCcEEEEEeccccccCHHHHHHHHHHHHh-------cCCC
Confidence            4567888899988766433210               12567899999999999999999999997654       3488


Q ss_pred             eEEEEEecCCCcccHHHHHHHH-HHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEE
Q 017085          216 VHAVIIGSDMNAQTKFESELRN-YVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLG  294 (377)
Q Consensus       216 ~~l~i~G~~~~~~~~~~~~l~~-~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~  294 (377)
                      ++|+++|.+....     .... .+.+.+..++|.+.|+.+++.++|+.||++++||.  .|++|++++|||++|+|||+
T Consensus       220 ~~l~i~G~~~~~~-----~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~i~ps~--~e~~~~~~~Ea~~~G~Pvi~  292 (359)
T cd03808         220 VRLLLVGDGDEEN-----PAAILEIEKLGLEGRVEFLGFRDDVPELLAAADVFVLPSY--REGLPRVLLEAMAMGRPVIA  292 (359)
T ss_pred             eEEEEEcCCCcch-----hhHHHHHHhcCCcceEEEeeccccHHHHHHhccEEEecCc--ccCcchHHHHHHHcCCCEEE
Confidence            9999999985432     1222 35667777899999999999999999999999999  89999999999999999999


Q ss_pred             eCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 017085          295 TAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIA  362 (377)
Q Consensus       295 s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~  362 (377)
                      |+.++..+++.++.+|++++++|  +++++++|.+++++++.+.++++++++.+.++|+|+.+++++.
T Consensus       293 s~~~~~~~~i~~~~~g~~~~~~~--~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  358 (359)
T cd03808         293 TDVPGCREAVIDGVNGFLVPPGD--AEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKLL  358 (359)
T ss_pred             ecCCCchhhhhcCcceEEECCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence            99999999999889999999888  9999999999999999999999999999999999999999875

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=9.9e-36  Score=267.64  Aligned_cols=310  Identities=21%  Similarity=0.242  Sum_probs=235.1

Q ss_pred             cHhhHHHhcCceEEEEEecCCC-cchhHhhhhhhhhcccCc----------eEEEccchhHHHhhhcccEEEEcCchhhh
Q 017085            2 ELAFLLRGVGTKVNWITIQKPS-EEDEVIYSLEHKMWDRGV----------QVISAKGQETINTALKADLIVLNTAVAGK   70 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~Div~~~~~~~~~   70 (377)
                      +++++|.+.||+|++++..... ....    .........+          ..........+++..+||+||++......
T Consensus        21 ~l~~~L~~~g~~v~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~i~~~~~~~~~   96 (348)
T cd03820          21 NLANALAEKGHEVTIISLDKGEPPFYE----LDPKIKVIDLGDKRDSKLLARFKKLRRLRKLLKNNKPDVVISFLTSLLT   96 (348)
T ss_pred             HHHHHHHhCCCeEEEEecCCCCCCccc----cCCccceeecccccccchhccccchHHHHHhhcccCCCEEEEcCchHHH
Confidence            5889999999999999976543 1111    0111100111          11112234555667899999999876222


Q ss_pred             HHHHHhhcCCCccccceeEEeeeecccccchh-----hhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcC
Q 017085           71 WLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLD-----YVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLG  145 (377)
Q Consensus        71 ~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ng  145 (377)
                      ++.. .....    ++++.+.|+.........     ....++.+|.+++.|......       ....+..++.++|||
T Consensus        97 ~~~~-~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~-------~~~~~~~~~~vi~~~  164 (348)
T cd03820          97 FLAS-LGLKI----VKLIVSEHNSPDAYKKRLRRLLLRRLLYRRADAVVVLTEEDRAL-------YYKKFNKNVVVIPNP  164 (348)
T ss_pred             HHHH-Hhhcc----ccEEEecCCCccchhhhhHHHHHHHHHHhcCCEEEEeCHHHHHH-------hhccCCCCeEEecCC
Confidence            2222 11111    478888887654332211     344568899999999988611       223456789999999


Q ss_pred             ChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCC
Q 017085          146 NSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDM  225 (377)
Q Consensus       146 i~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~  225 (377)
                      ++...+...                  .+.+.+.++++|++.+.||++.+++++..+.+       ..++++|+|+|.+ 
T Consensus       165 ~~~~~~~~~------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~-------~~~~~~l~i~G~~-  218 (348)
T cd03820         165 LPFPPEEPS------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAK-------KHPDWKLRIVGDG-  218 (348)
T ss_pred             cChhhcccc------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHh-------cCCCeEEEEEeCC-
Confidence            988765322                  12567889999999999999999999998754       3489999999998 


Q ss_pred             CcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC-Ccccce
Q 017085          226 NAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG-GTTEIV  304 (377)
Q Consensus       226 ~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~-~~~e~~  304 (377)
                          +....+.+.++++++.++|.+.|..+++.++|+.||++++||.  .|++|++++|||++|+|||+++.+ +..+++
T Consensus       219 ----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~i~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~  292 (348)
T cd03820         219 ----PEREALEALIKELGLEDRVILLGFTKNIEEYYAKASIFVLTSR--FEGFPMVLLEAMAFGLPVISFDCPTGPSEII  292 (348)
T ss_pred             ----CCHHHHHHHHHHcCCCCeEEEcCCcchHHHHHHhCCEEEeCcc--ccccCHHHHHHHHcCCCEEEecCCCchHhhh
Confidence                3567778888999999999999998999999999999999999  899999999999999999999965 566777


Q ss_pred             ecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 017085          305 VNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIA  362 (377)
Q Consensus       305 ~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~  362 (377)
                      .++.+|+++++.|  +++++++|.++++|++.+.++++++++. .++|+|++++++|.
T Consensus       293 ~~~~~g~~~~~~~--~~~~~~~i~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  347 (348)
T cd03820         293 EDGVNGLLVPNGD--VEALAEALLRLMEDEELRKRMGANARES-AERFSIENIIKQWE  347 (348)
T ss_pred             ccCcceEEeCCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHH-HHHhCHHHHHHHhc
Confidence            7667999999888  9999999999999999999999999664 57799999999885

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5.6e-36  Score=271.52  Aligned_cols=323  Identities=21%  Similarity=0.212  Sum_probs=236.7

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhh--hh-hhhhc-ccCce--EEEccchhHHHhhhcccEEEEcCchhhhHHHHH
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIY--SL-EHKMW-DRGVQ--VISAKGQETINTALKADLIVLNTAVAGKWLDAV   75 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~--~~-~~~~~-~~~~~--~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~   75 (377)
                      +|+++|.++||+|++++............  .. ..... .....  +.........++..+||+||+++.....+....
T Consensus        22 ~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdii~~~~~~~~~~~~~~  101 (364)
T cd03814          22 RLVEHLRARGHEVLVIAPGPFRESEGPARVVPVPSVPLPGYPEIRLALPPRRRVRRLLDAFAPDVVHIATPGPLGLAALR  101 (364)
T ss_pred             HHHHHHHHCCCEEEEEeCCchhhccCCCCceeecccccCcccceEecccchhhHHHHHHhcCCCEEEEeccchhhHHHHH
Confidence            68999999999999999765421111000  00 00000 00111  111223445556789999999976533222222


Q ss_pred             hhcCCCccccceeEEeeeeccccc------------chhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEE
Q 017085           76 LKEDVPRVLPNVLWWIHEMRGHYF------------KLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVH  143 (377)
Q Consensus        76 ~~~~~~~~~~~~v~~~h~~~~~~~------------~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~  143 (377)
                      ...   ....|++.+.|+....+.            .......++.+|.+++.|....+.+..       ....++.+++
T Consensus       102 ~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~-------~~~~~~~~~~  171 (364)
T cd03814         102 AAR---RLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRA-------RGFRRVRLWP  171 (364)
T ss_pred             HHH---HcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhc-------cCCCceeecC
Confidence            211   122578888887543221            112233446889999999988874432       2346799999


Q ss_pred             cCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEec
Q 017085          144 LGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS  223 (377)
Q Consensus       144 ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~  223 (377)
                      ||+|...+.+...       ....++.++ +++.++++++|++.+.||++.+++++..+.+       + ++++|+++|.
T Consensus       172 ~g~~~~~~~~~~~-------~~~~~~~~~-~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~-------~-~~~~l~i~G~  235 (364)
T cd03814         172 RGVDTELFHPRRR-------DEALRARLG-PPDRPVLLYVGRLAPEKNLEALLDADLPLRR-------R-PPVRLVIVGD  235 (364)
T ss_pred             CCccccccCcccc-------cHHHHHHhC-CCCCeEEEEEeccccccCHHHHHHHHHHhhh-------c-CCceEEEEeC
Confidence            9999887654322       122344455 4667889999999999999999999997754       3 6899999999


Q ss_pred             CCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcc
Q 017085          224 DMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTT  301 (377)
Q Consensus       224 ~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~  301 (377)
                      +.     ..+.++      +..++|.+.|+.  +++.++|+.||++++||.  .|++|++++|||+||+|||+++.++..
T Consensus       236 ~~-----~~~~~~------~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~--~e~~~~~~lEa~a~g~PvI~~~~~~~~  302 (364)
T cd03814         236 GP-----ARARLE------ARYPNVHFLGFLDGEELAAAYASADVFVFPSR--TETFGLVVLEAMASGLPVVAPDAGGPA  302 (364)
T ss_pred             Cc-----hHHHHh------ccCCcEEEEeccCHHHHHHHHHhCCEEEECcc--cccCCcHHHHHHHcCCCEEEcCCCCch
Confidence            73     333333      345789999964  789999999999999999  899999999999999999999999999


Q ss_pred             cceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 017085          302 EIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK  366 (377)
Q Consensus       302 e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  366 (377)
                      +++.++++|+++++.+  .++++++|.++++|++.+.++++++++.+ ++|+|+.+++++.++|+
T Consensus       303 ~~i~~~~~g~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  364 (364)
T cd03814         303 DIVTDGENGLLVEPGD--AEAFAAALAALLADPELRRRMAARARAEA-ERRSWEAFLDNLLEAYR  364 (364)
T ss_pred             hhhcCCcceEEcCCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHhhC
Confidence            9999989999999888  99999999999999999999999999988 77999999999999873

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.1e-35  Score=269.77  Aligned_cols=311  Identities=17%  Similarity=0.197  Sum_probs=222.8

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEcc------------chhHHH----hhhcccEEEEcC
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK------------GQETIN----TALKADLIVLNT   65 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~----~~~~~Div~~~~   65 (377)
                      +|+++|.++||+|+|++........        .....|++++...            .+..+.    ...++|+||...
T Consensus        23 ~la~~L~~~g~~v~v~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~   94 (363)
T cd04955          23 ELAPRLVARGHEVTVYCRSPYPKQK--------ETEYNGVRLIHIPAPEIGGLGTIIYDILAILHALFVKRDIDHVHALG   94 (363)
T ss_pred             HHHHHHHhcCCCEEEEEccCCCCCc--------ccccCCceEEEcCCCCccchhhhHHHHHHHHHHHhccCCeEEEEecC
Confidence            6899999999999999976542211        1112344443211            011111    123444444444


Q ss_pred             chhhhHHHHHhhcCCCccccceeEEeeeecccc--cc---hhh-----hccccccceeeeeccchhhHhhhhhhhhhhcc
Q 017085           66 AVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY--FK---LDY-----VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIK  135 (377)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~--~~---~~~-----~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~  135 (377)
                      +....+...+..     ...|++++.|+.....  +.   ..+     ...+..+|.+++.|....+.+..    .+|.+
T Consensus        95 ~~~~~~~~~~~~-----~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~----~~~~~  165 (363)
T cd04955          95 PAIAPFLPLLRL-----KGKKVVVNMDGLEWKRAKWGRPAKRYLKFGEKLAVKFADRLIADSPGIKEYLKE----KYGRD  165 (363)
T ss_pred             ccHHHHHHHHHh-----cCCCEEEEccCcceeecccccchhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH----hcCCC
Confidence            433222221111     1358888898753211  00   111     22346789999999999888764    45533


Q ss_pred             CCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCC
Q 017085          136 MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPS  215 (377)
Q Consensus       136 ~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~  215 (377)
                        . .+||||+|...+..          +...++.++++++. .++++||+.+.||++.++++++++.          .+
T Consensus       166 --~-~~i~ngv~~~~~~~----------~~~~~~~~~~~~~~-~i~~~G~~~~~Kg~~~li~a~~~l~----------~~  221 (363)
T cd04955         166 --S-TYIPYGADHVVSSE----------EDEILKKYGLEPGR-YYLLVGRIVPENNIDDLIEAFSKSN----------SG  221 (363)
T ss_pred             --C-eeeCCCcChhhcch----------hhhhHHhcCCCCCc-EEEEEecccccCCHHHHHHHHHhhc----------cC
Confidence              2 89999999876533          12234456665544 5779999999999999999998652          37


Q ss_pred             eEEEEEecCCCcccHHHHHHHHHHH-hcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCC-CccchHHHHHHHcCCc
Q 017085          216 VHAVIIGSDMNAQTKFESELRNYVM-QKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWG-ECFGRITIEAMAFQLP  291 (377)
Q Consensus       216 ~~l~i~G~~~~~~~~~~~~l~~~~~-~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~-e~~~~~~~Ea~a~g~P  291 (377)
                      ++|+++|++...     ..+.+.+. .++..++|+|+|++  +++.++++.||++++||.  . |++|++++|||++|+|
T Consensus       222 ~~l~ivG~~~~~-----~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~--~~e~~~~~~~EAma~G~P  294 (363)
T cd04955         222 KKLVIVGNADHN-----TPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAALFYLHGH--SVGGTNPSLLEAMAYGCP  294 (363)
T ss_pred             ceEEEEcCCCCc-----chHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCEEEeCCc--cCCCCChHHHHHHHcCCC
Confidence            999999998432     22333333 56777899999987  678899999999999999  6 9999999999999999


Q ss_pred             EEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 017085          292 VLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK  366 (377)
Q Consensus       292 vI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  366 (377)
                      ||+|+.++..|++.+  +|+++++++  .  ++++|.+++++++.+.++++++++.+.++|||+.+++++.++|+
T Consensus       295 vI~s~~~~~~e~~~~--~g~~~~~~~--~--l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~  363 (363)
T cd04955         295 VLASDNPFNREVLGD--KAIYFKVGD--D--LASLLEELEADPEEVSAMAKAARERIREKYTWEKIADQYEELYK  363 (363)
T ss_pred             EEEecCCccceeecC--CeeEecCch--H--HHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence            999999999999865  888888765  3  99999999999999999999999999889999999999999884

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.8e-36  Score=270.71  Aligned_cols=301  Identities=16%  Similarity=0.137  Sum_probs=218.9

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcc--cCce---EEEccchhHHHhhhcccEEEEcCchhhhHHHHHh
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD--RGVQ---VISAKGQETINTALKADLIVLNTAVAGKWLDAVL   76 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~   76 (377)
                      +|+++|+++||+|++++...+................  ....   ......+..+++..+||+||+|+.....+  . .
T Consensus        27 ~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~--~-~  103 (335)
T cd03802          27 ALTEGLVARGHEVTLFASGDSKTAAPLVPVVPEPLRLDAPGRDRAEAEALALAERALAAGDFDIVHNHSLHLPLP--F-A  103 (335)
T ss_pred             HHHHHHHhcCceEEEEecCCCCcccceeeccCCCcccccchhhHhhHHHHHHHHHHHhcCCCCEEEecCcccchh--h-h
Confidence            6899999999999999976653221111000000000  0000   00112334556778999999998765544  1 1


Q ss_pred             hcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhh
Q 017085           77 KEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAED  156 (377)
Q Consensus        77 ~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~  156 (377)
                          .....|++++.|+........ ........+.+++.|......+..       .  .++.+||||+|.+.+.+.. 
T Consensus       104 ----~~~~~~~v~~~h~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~-------~--~~~~vi~ngvd~~~~~~~~-  168 (335)
T cd03802         104 ----RPLPVPVVTTLHGPPDPELLK-LYYAARPDVPFVSISDAQRRPWPP-------L--PWVATVHNGIDLDDYPFRG-  168 (335)
T ss_pred             ----cccCCCEEEEecCCCCcccch-HHHhhCcCCeEEEecHHHHhhccc-------c--cccEEecCCcChhhCCCCC-
Confidence                112357899999875443333 333445667788888877765542       1  6799999999988765311 


Q ss_pred             hhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHH
Q 017085          157 NVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELR  236 (377)
Q Consensus       157 ~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~  236 (377)
                                        .+...++++||+.+.||++.+++++.+            .+++|+++|.+..     ...+.
T Consensus       169 ------------------~~~~~i~~~Gr~~~~Kg~~~li~~~~~------------~~~~l~i~G~~~~-----~~~~~  213 (335)
T cd03802         169 ------------------PKGDYLLFLGRISPEKGPHLAIRAARR------------AGIPLKLAGPVSD-----PDYFY  213 (335)
T ss_pred             ------------------CCCCEEEEEEeeccccCHHHHHHHHHh------------cCCeEEEEeCCCC-----HHHHH
Confidence                              455678999999999999999998653            5799999999842     33444


Q ss_pred             HHHHhcC-CCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeee
Q 017085          237 NYVMQKK-IQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLH  313 (377)
Q Consensus       237 ~~~~~~~-~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~  313 (377)
                      ....+.. +.++|+|+|++  +++.++|+.+|++++||. +.|+||++++|||+||+|||+|+.|+..|++.++.+|+++
T Consensus       214 ~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~-~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~  292 (335)
T cd03802         214 REIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPIL-WEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLV  292 (335)
T ss_pred             HHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCc-ccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEe
Confidence            4444433 56799999997  567899999999999997 2599999999999999999999999999999998899999


Q ss_pred             cCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 017085          314 PVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK  366 (377)
Q Consensus       314 ~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  366 (377)
                      ++    +++++++|.++.+..      .+++++.+.++|||+.+++++.++|+
T Consensus       293 ~~----~~~l~~~l~~l~~~~------~~~~~~~~~~~~s~~~~~~~~~~~y~  335 (335)
T cd03802         293 DS----VEELAAAVARADRLD------RAACRRRAERRFSAARMVDDYLALYR  335 (335)
T ss_pred             CC----HHHHHHHHHHHhccH------HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence            74    899999999986543      24567778899999999999999984

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.

>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=100.00  E-value=1.4e-35  Score=271.64  Aligned_cols=276  Identities=14%  Similarity=0.120  Sum_probs=205.4

Q ss_pred             HHHhhhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeeccccc----------ch------------hhhcccc
Q 017085           51 TINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYF----------KL------------DYVKHLP  108 (377)
Q Consensus        51 ~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~----------~~------------~~~~~~~  108 (377)
                      .++++.++|+||+++...+.++..      .....|.+++.|+.....+          .+            .....++
T Consensus        98 ~~~~~~~~D~v~~~~~~~~~~~~~------~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  171 (397)
T TIGR03087        98 ALLAAEPVDAIVVFSSAMAQYVTP------HVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLLLAYERAIAA  171 (397)
T ss_pred             HHHhhCCCCEEEEeccccceeccc------cccCCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHh
Confidence            445568999999997654433221      1112477778887532110          00            0112346


Q ss_pred             ccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccc
Q 017085          109 LVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR  188 (377)
Q Consensus       109 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~  188 (377)
                      .+|.++++|+...+.+.+    ..+....++.+||||+|.+.|.+....            ...++.+.++++|+|++.+
T Consensus       172 ~ad~vi~~S~~~~~~l~~----~~~~~~~~v~vipngvd~~~f~~~~~~------------~~~~~~~~~~ilf~G~l~~  235 (397)
T TIGR03087       172 RFDAATFVSRAEAELFRR----LAPEAAGRITAFPNGVDADFFSPDRDY------------PNPYPPGKRVLVFTGAMDY  235 (397)
T ss_pred             hCCeEEEcCHHHHHHHHH----hCCCCCCCeEEeecccchhhcCCCccc------------cCCCCCCCcEEEEEEecCC
Confidence            899999999999887764    233455789999999999877543211            0012245678999999999


Q ss_pred             cchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEE
Q 017085          189 GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLV  268 (377)
Q Consensus       189 ~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l  268 (377)
                      .||++.++.++..+...+++   +.++++|+|+|+++     . ..+    ++++..++|+|+|+++++..+|+.||+++
T Consensus       236 ~k~~~~l~~~~~~~~~~l~~---~~p~~~l~ivG~g~-----~-~~~----~~l~~~~~V~~~G~v~~~~~~~~~adv~v  302 (397)
T TIGR03087       236 WPNIDAVVWFAERVFPAVRA---RRPAAEFYIVGAKP-----S-PAV----RALAALPGVTVTGSVADVRPYLAHAAVAV  302 (397)
T ss_pred             ccCHHHHHHHHHHHHHHHHH---HCCCcEEEEECCCC-----h-HHH----HHhccCCCeEEeeecCCHHHHHHhCCEEE
Confidence            99999998665554444443   34899999999984     1 223    33344568999999999999999999999


Q ss_pred             ecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHH
Q 017085          269 QNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERV  348 (377)
Q Consensus       269 ~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~  348 (377)
                      +||.. .||+|++++|||+||+|||+|+.++ ..+...+++|++++ +|  +++++++|.++++|++.+.+|++++++++
T Consensus       303 ~Ps~~-~eG~~~~~lEAma~G~PVV~t~~~~-~~i~~~~~~g~lv~-~~--~~~la~ai~~ll~~~~~~~~~~~~ar~~v  377 (397)
T TIGR03087       303 APLRI-ARGIQNKVLEAMAMAKPVVASPEAA-EGIDALPGAELLVA-AD--PADFAAAILALLANPAEREELGQAARRRV  377 (397)
T ss_pred             ecccc-cCCcccHHHHHHHcCCCEEecCccc-ccccccCCcceEeC-CC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence            99972 5999999999999999999999753 23333456788886 66  99999999999999999999999999999


Q ss_pred             HHhcCHHHHHHHHHHHHH
Q 017085          349 KEIFQEHHMAERIAVVLK  366 (377)
Q Consensus       349 ~~~f~~~~~~~~~~~~~~  366 (377)
                      .++|||+.+++++.++|+
T Consensus       378 ~~~fsw~~~~~~~~~~l~  395 (397)
T TIGR03087       378 LQHYHWPRNLARLDALLE  395 (397)
T ss_pred             HHhCCHHHHHHHHHHHhc
Confidence            999999999999999885

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>TIGR02918 accessory Sec system glycosylation protein GtfA

Probab=100.00  E-value=1.9e-35  Score=273.55  Aligned_cols=273  Identities=18%  Similarity=0.275  Sum_probs=212.1

Q ss_pred             hhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc---------cchhh---hccccccceeeeeccchhh
Q 017085           55 ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY---------FKLDY---VKHLPLVAGAMIDSHVTAE  122 (377)
Q Consensus        55 ~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~---------~~~~~---~~~~~~~~~~~~~s~~~~~  122 (377)
                      ..++||+|++.+....+.  ++.. .+  ..|.+.++|.-....         +...+   ......+|.++++|...++
T Consensus       209 ~~~~di~i~dr~~~~~~~--~~~~-~~--~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~  283 (500)
T TIGR02918       209 LTKKDIIILDRSTGIGQA--VLEN-KG--PAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQ  283 (500)
T ss_pred             CCCCCEEEEcCCcccchH--HHhc-CC--CceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHH
Confidence            468999999875532222  2211 11  246777888543111         00111   1334678999999999888


Q ss_pred             HhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHH
Q 017085          123 YWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYES  202 (377)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l  202 (377)
                      .+.+.+. .++.+.+++.++|||++...+.+..                  ..+...|+++||+.+.||++.+++|+..+
T Consensus       284 ~l~~~~~-~~~~~~~ki~viP~g~~~~~~~~~~------------------~r~~~~il~vGrl~~~Kg~~~li~A~~~l  344 (500)
T TIGR02918       284 ILKNQFK-KYYNIEPRIYTIPVGSLDELQYPEQ------------------ERKPFSIITASRLAKEKHIDWLVKAVVKA  344 (500)
T ss_pred             HHHHHhh-hhcCCCCcEEEEcCCCcccccCccc------------------ccCCeEEEEEeccccccCHHHHHHHHHHH
Confidence            7776443 2334457899999998654332110                  13457899999999999999999999987


Q ss_pred             HHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHH
Q 017085          203 LELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRIT  282 (377)
Q Consensus       203 ~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~  282 (377)
                      .+       +.|+++|+|+|+|     +..+.++++++++++.++|.|+|+. ++.++|+.||++++||.  .||||+++
T Consensus       345 ~~-------~~p~~~l~i~G~G-----~~~~~l~~~i~~~~l~~~V~f~G~~-~~~~~~~~adv~v~pS~--~Egfgl~~  409 (500)
T TIGR02918       345 KK-------SVPELTFDIYGEG-----GEKQKLQKIINENQAQDYIHLKGHR-NLSEVYKDYELYLSAST--SEGFGLTL  409 (500)
T ss_pred             Hh-------hCCCeEEEEEECc-----hhHHHHHHHHHHcCCCCeEEEcCCC-CHHHHHHhCCEEEEcCc--cccccHHH
Confidence            65       4589999999998     4678899999999999999999975 89999999999999999  99999999


Q ss_pred             HHHHHcCCcEEEeCCC-CcccceecCcceeeecCCC--CC----hhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHH
Q 017085          283 IEAMAFQLPVLGTAAG-GTTEIVVNGTTGLLHPVGK--EG----ITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEH  355 (377)
Q Consensus       283 ~Ea~a~g~PvI~s~~~-~~~e~~~~~~~g~~~~~~~--~~----~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~  355 (377)
                      +||||||+|||+++++ |.+|++.++.+|+++++++  .|    +++||++|.++++ ++.+.+|++++++.+ ++|||+
T Consensus       410 lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a-~~fs~~  487 (500)
T TIGR02918       410 MEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN-SNDIDAFHEYSYQIA-EGFLTA  487 (500)
T ss_pred             HHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHH-HhcCHH
Confidence            9999999999999986 8999999999999998531  12    6789999999995 557899999999965 679999


Q ss_pred             HHHHHHHHHHHHH
Q 017085          356 HMAERIAVVLKEV  368 (377)
Q Consensus       356 ~~~~~~~~~~~~~  368 (377)
                      .++++|.++++++
T Consensus       488 ~v~~~w~~ll~~~  500 (500)
T TIGR02918       488 NIIEKWKKLVREV  500 (500)
T ss_pred             HHHHHHHHHHhhC
Confidence            9999999998763

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.8e-35  Score=266.72  Aligned_cols=328  Identities=22%  Similarity=0.301  Sum_probs=243.9

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhc-----cc--CceEEEccchhHHHhhhcccEEEEcCchhhhHHHH
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW-----DR--GVQVISAKGQETINTALKADLIVLNTAVAGKWLDA   74 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~   74 (377)
                      +++++|.++||+|++++...................     ..  ..............+..+||+||++++........
T Consensus        22 ~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~  101 (374)
T cd03817          22 RLAEELEKRGHEVYVVAPSYPGAPEEEEVVVVRPFRVPTFKYPDFRLPLPIPRALIIILKELGPDIVHTHTPFSLGLLGL  101 (374)
T ss_pred             HHHHHHHHcCCeEEEEeCCCCCCCcccccccccccccccchhhhhhccccHHHHHHHHHhhcCCCEEEECCchhhhhHHH
Confidence            588999999999999996654322111100000000     00  00001111223345678999999998754333222


Q ss_pred             HhhcCCCccccceeEEeeeeccccc--------------c-hhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCe
Q 017085           75 VLKEDVPRVLPNVLWWIHEMRGHYF--------------K-LDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDT  139 (377)
Q Consensus        75 ~~~~~~~~~~~~~v~~~h~~~~~~~--------------~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  139 (377)
                      ....   ....|++++.|+....+.              . ......++.+|.+++.|....+++.+     ++.+ .++
T Consensus       102 ~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~-----~~~~-~~~  172 (374)
T cd03817         102 RVAR---KLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLRE-----YGVK-RPI  172 (374)
T ss_pred             HHHH---HcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHh-----cCCC-Cce
Confidence            2211   123578888887543211              0 12234457899999999988877763     3433 459


Q ss_pred             EEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEE
Q 017085          140 YVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAV  219 (377)
Q Consensus       140 ~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~  219 (377)
                      .++|||+|...+.....        ...++.++++++.++++++|++.+.||++.+++++..+.+       +.++++++
T Consensus       173 ~vi~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~-------~~~~~~l~  237 (374)
T cd03817         173 EVIPTGIDLDRFEPVDG--------DDERRKLGIPEDEPVLLYVGRLAKEKNIDFLIRAFARLLK-------EEPDVKLV  237 (374)
T ss_pred             EEcCCccchhccCccch--------hHHHHhcCCCCCCeEEEEEeeeecccCHHHHHHHHHHHHH-------hCCCeEEE
Confidence            99999999887654331        2236677777888999999999999999999999997754       33789999


Q ss_pred             EEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCC
Q 017085          220 IIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA  297 (377)
Q Consensus       220 i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~  297 (377)
                      ++|.+     +..+.+++.++++++.++|.++|+.  +++..+|+.||++++||.  .|++|++++|||++|+|||+++.
T Consensus       238 i~G~~-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~--~e~~~~~~~Ea~~~g~PvI~~~~  310 (374)
T cd03817         238 IVGDG-----PEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFAST--TETQGLVLLEAMAAGLPVVAVDA  310 (374)
T ss_pred             EEeCC-----chHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEeccc--ccCcChHHHHHHHcCCcEEEeCC
Confidence            99998     4677888888889999999999987  789999999999999999  89999999999999999999999


Q ss_pred             CCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 017085          298 GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE  367 (377)
Q Consensus       298 ~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~  367 (377)
                      ++..+++.++.+|+++++.+  . +++++|.+++++++.++++++++++.+.+.+    +++++.++|++
T Consensus       311 ~~~~~~i~~~~~g~~~~~~~--~-~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  373 (374)
T cd03817         311 PGLPDLVADGENGFLFPPGD--E-ALAEALLRLLQDPELRRRLSKNAEESAEKFS----FAKKVEKLYEE  373 (374)
T ss_pred             CChhhheecCceeEEeCCCC--H-HHHHHHHHHHhChHHHHHHHHHHHHHHHHHH----HHHHHHHHHhc
Confidence            99999999999999999876  5 9999999999999999999999999886644    66777777764

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.

>PRK10125 putative glycosyl transferase; Provisional

Probab=100.00  E-value=8.1e-36  Score=270.99  Aligned_cols=315  Identities=12%  Similarity=0.076  Sum_probs=209.9

Q ss_pred             CcHhhHHHhcCceEEEEEecCCCcchhHh-hh-------------hhhhhc--ccCceE-EEccchhHHH-hhhcccEEE
Q 017085            1 MELAFLLRGVGTKVNWITIQKPSEEDEVI-YS-------------LEHKMW--DRGVQV-ISAKGQETIN-TALKADLIV   62 (377)
Q Consensus         1 ~~la~~L~~~G~eV~v~~~~~~~~~~~~~-~~-------------~~~~~~--~~~~~~-~~~~~~~~~~-~~~~~Div~   62 (377)
                      ++|++.|.++||+|.++......+..... ..             ......  -.+... ........++ +..+|||||
T Consensus        20 ~~L~~~l~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~pDviH   99 (405)
T PRK10125         20 LDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFGNFNELYRTITRTPGPVVLH   99 (405)
T ss_pred             HHHHHHHHhcCCeEEEEEecCCCcccccccCCcceEEEecccHHHHHHHHHHHhcchhhcchHHHHHHHHhhccCCCEEE
Confidence            36899999999999999976543222000 00             000000  000000 1111222223 578999999


Q ss_pred             EcCchhh---hH-HHHHh-hcCCCccccceeEEeeeecccc-----------cchh---------h--------------
Q 017085           63 LNTAVAG---KW-LDAVL-KEDVPRVLPNVLWWIHEMRGHY-----------FKLD---------Y--------------  103 (377)
Q Consensus        63 ~~~~~~~---~~-~~~~~-~~~~~~~~~~~v~~~h~~~~~~-----------~~~~---------~--------------  103 (377)
                      +|.....   .+ +.... ........+|+|||+|+++...           ++..         +              
T Consensus       100 lH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~  179 (405)
T PRK10125        100 FHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAG  179 (405)
T ss_pred             EecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccchHHHHHHH
Confidence            9975432   21 11111 0112233469999999987321           0000         0              


Q ss_pred             -----hccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCe
Q 017085          104 -----VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDL  178 (377)
Q Consensus       104 -----~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~  178 (377)
                           .......+.++++|.+.++.+..    .++  ..++.+||||+|.+.+...+..       ...    ..+++.+
T Consensus       180 k~~~~~~~~~~~~~iV~~S~~l~~~~~~----~~~--~~~i~vI~NGid~~~~~~~~~~-------~~~----~~~~~~~  242 (405)
T PRK10125        180 KRQLFREMLALGCQFISPSQHVADAFNS----LYG--PGRCRIINNGIDMATEAILAEL-------PPV----RETQGKP  242 (405)
T ss_pred             HHHHHHHHhhcCcEEEEcCHHHHHHHHH----HcC--CCCEEEeCCCcCcccccccccc-------ccc----ccCCCCC
Confidence                 01112346789999988886553    333  4789999999997532211110       000    0124667


Q ss_pred             EEEEeccc--cccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--
Q 017085          179 LFAIINSV--SRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--  254 (377)
Q Consensus       179 ~i~~~G~~--~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--  254 (377)
                      +++++|+.  .+.||++.+++|+..+.          ++++|+++|.+.+..                .+++.++|..  
T Consensus       243 ~il~v~~~~~~~~Kg~~~li~A~~~l~----------~~~~L~ivG~g~~~~----------------~~~v~~~g~~~~  296 (405)
T PRK10125        243 KIAVVAHDLRYDGKTDQQLVREMMALG----------DKIELHTFGKFSPFT----------------AGNVVNHGFETD  296 (405)
T ss_pred             EEEEEEeccccCCccHHHHHHHHHhCC----------CCeEEEEEcCCCccc----------------ccceEEecCcCC
Confidence            88999984  47899999999998541          579999999874210                2368888865  


Q ss_pred             -CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhC
Q 017085          255 -LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH  333 (377)
Q Consensus       255 -~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~  333 (377)
                       .++.++|+.||++|+||.  .|+||++++||||||+|||+|++||++|++.++ +|++++++|  +++|++.+     +
T Consensus       297 ~~~l~~~y~~aDvfV~pS~--~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv~~~d--~~~La~~~-----~  366 (405)
T PRK10125        297 KRKLMSALNQMDALVFSSR--VDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTVSEEE--VLQLAQLS-----K  366 (405)
T ss_pred             HHHHHHHHHhCCEEEECCc--cccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEECCCC--HHHHHhcc-----C
Confidence             568999999999999999  999999999999999999999999999999765 999999998  99999854     4


Q ss_pred             HHHHHH----HHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 017085          334 VERRLT----MGKRGYERVKEIFQEHHMAERIAVVLKEV  368 (377)
Q Consensus       334 ~~~~~~----~~~~~~~~~~~~f~~~~~~~~~~~~~~~~  368 (377)
                      ++...+    +..++++.+.++||++.++++|.++|+++
T Consensus       367 ~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l  405 (405)
T PRK10125        367 PEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL  405 (405)
T ss_pred             HHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence            333332    23568888889999999999999999863

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.3e-35  Score=265.59  Aligned_cols=317  Identities=23%  Similarity=0.273  Sum_probs=241.3

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhh--hhc----ccCceEEEccchhHHHhhhcccEEEEcCc-hhhhHHHH
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEH--KMW----DRGVQVISAKGQETINTALKADLIVLNTA-VAGKWLDA   74 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~Div~~~~~-~~~~~~~~   74 (377)
                      +++++|.+.||+|++++................  ...    ..............+++..+||+||++.. ....  ..
T Consensus        20 ~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~--~~   97 (353)
T cd03811          20 NLANGLDKRGYDVTLVVLRDEGDYLELLPSNVKLIPVRVLKLKSLRDLLAILRLRRLLRKEKPDVVISHLTTTPNV--LA   97 (353)
T ss_pred             HHHHHHHhcCceEEEEEcCCCCccccccccchhhhceeeeecccccchhHHHHHHHHHHhcCCCEEEEcCccchhH--HH
Confidence            588999999999999996654322211100000  000    00000111224455667789999999987 3222  22


Q ss_pred             HhhcCCCccccceeEEeeeecccccch------hhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChh
Q 017085           75 VLKEDVPRVLPNVLWWIHEMRGHYFKL------DYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSK  148 (377)
Q Consensus        75 ~~~~~~~~~~~~~v~~~h~~~~~~~~~------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~  148 (377)
                      ......   ..|++++.|+........      .....+..+|.+++.|....+++.+    .++.+..++.++|||++.
T Consensus        98 ~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----~~~~~~~~~~vi~~~~~~  170 (353)
T cd03811          98 LLAARL---GTKLIVWEHNSLSLELKRKLRLLLLIRKLYRRADKIVAVSEGVKEDLLK----LLGIPPDKIEVIYNPIDI  170 (353)
T ss_pred             HHHhhc---CCceEEEEcCcchhhhccchhHHHHHHhhccccceEEEeccchhhhHHH----hhcCCccccEEecCCcCh
Confidence            222111   368999999886543321      2345668999999999999988876    444456889999999998


Q ss_pred             hhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcc
Q 017085          149 ELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ  228 (377)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~  228 (377)
                      ..+......       .   ..++.+.+.++++++|++.+.||++.+++++..+.+       +.++++|+++|.+    
T Consensus       171 ~~~~~~~~~-------~---~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~-------~~~~~~l~i~G~~----  229 (353)
T cd03811         171 EEIRALAEE-------P---LELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRK-------EGPDARLVILGDG----  229 (353)
T ss_pred             hhcCcccch-------h---hhcCCCCCceEEEEEecchhhcChHHHHHHHHHhhh-------cCCCceEEEEcCC----
Confidence            876543211       0   034556778999999999999999999999997754       3368999999998    


Q ss_pred             cHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCc
Q 017085          229 TKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGT  308 (377)
Q Consensus       229 ~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~  308 (377)
                       +..+.+++.++++++.++|.+.|+.+++.++|+.||++++||.  .|++|++++|||++|+|||+++.++..|++.++.
T Consensus       230 -~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~i~ps~--~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~  306 (353)
T cd03811         230 -PLREELEALAKELGLADRVHFLGFQSNPYPYLKAADLFVLSSR--YEGFPNVLLEAMALGTPVVATDCPGPREILEDGE  306 (353)
T ss_pred             -ccHHHHHHHHHhcCCCccEEEecccCCHHHHHHhCCEEEeCcc--cCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCC
Confidence             4567778889999999999999999999999999999999999  8999999999999999999999999999999999


Q ss_pred             ceeeecCCCCChhHH---HHHHHHHhhCHHHHHHHHHHHHHHHHHhcC
Q 017085          309 TGLLHPVGKEGITPL---AKNIVKLATHVERRLTMGKRGYERVKEIFQ  353 (377)
Q Consensus       309 ~g~~~~~~~~~~~~l---a~~i~~l~~~~~~~~~~~~~~~~~~~~~f~  353 (377)
                      +|+++++.+  .+++   ++++..+.++++.+.+++.++++.+.++|+
T Consensus       307 ~g~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (353)
T cd03811         307 NGLLVPVGD--EAALAAAALALLDLLLDPELRERLAAAARERVAREYS  352 (353)
T ss_pred             ceEEECCCC--HHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence            999999887  8888   777888888999999999988888888876

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.

>PLN02949 transferase, transferring glycosyl groups

Probab=100.00  E-value=1.7e-34  Score=264.75  Aligned_cols=234  Identities=18%  Similarity=0.221  Sum_probs=193.4

Q ss_pred             cccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEecccc
Q 017085          108 PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS  187 (377)
Q Consensus       108 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~  187 (377)
                      ..+|.++++|.++++.+.+    .++. ..++.+++||++...+...+..               .+.+...++++||+.
T Consensus       219 ~~ad~ii~nS~~t~~~l~~----~~~~-~~~i~vvyp~vd~~~~~~~~~~---------------~~~~~~~il~vGR~~  278 (463)
T PLN02949        219 RCAHLAMVNSSWTKSHIEA----LWRI-PERIKRVYPPCDTSGLQALPLE---------------RSEDPPYIISVAQFR  278 (463)
T ss_pred             CCCCEEEECCHHHHHHHHH----HcCC-CCCeEEEcCCCCHHHcccCCcc---------------ccCCCCEEEEEEeee
Confidence            6789999999999888764    3333 3578999999987654211100               013456789999999


Q ss_pred             ccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCc-ccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhc
Q 017085          188 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA-QTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAI  264 (377)
Q Consensus       188 ~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~-~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~a  264 (377)
                      ++||++.+|+|++.+.+.+.+   +.++++|+|+|++... +.++.+++++++++++++++|.|+|+.  +++.++|+.|
T Consensus       279 ~~Kg~~llI~A~~~l~~~~~~---~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~v~~~el~~ll~~a  355 (463)
T PLN02949        279 PEKAHALQLEAFALALEKLDA---DVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSYRDLVRLLGGA  355 (463)
T ss_pred             ccCCHHHHHHHHHHHHHhccc---cCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCCCCHHHHHHHHHhC
Confidence            999999999999987664433   2378999999997432 234668899999999999999999987  7899999999


Q ss_pred             CEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcc-cceec---CcceeeecCCCCChhHHHHHHHHHhh-CHHHHHH
Q 017085          265 DVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTT-EIVVN---GTTGLLHPVGKEGITPLAKNIVKLAT-HVERRLT  339 (377)
Q Consensus       265 dv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~-e~~~~---~~~g~~~~~~~~~~~~la~~i~~l~~-~~~~~~~  339 (377)
                      |++++||.  .|+||++++|||++|+|||+++.||.. +++.+   +.+|++++  |  +++++++|.++++ +++.+.+
T Consensus       356 ~~~v~~s~--~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~--~~~la~ai~~ll~~~~~~r~~  429 (463)
T PLN02949        356 VAGLHSMI--DEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--T--VEEYADAILEVLRMRETERLE  429 (463)
T ss_pred             cEEEeCCc--cCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--C--HHHHHHHHHHHHhCCHHHHHH
Confidence            99999998  999999999999999999999998864 77664   56899874  5  9999999999998 6788899


Q ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Q 017085          340 MGKRGYERVKEIFQEHHMAERIAVVLKEVLKK  371 (377)
Q Consensus       340 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  371 (377)
                      |++++++.+ ++|||+.+++++.+.+++++..
T Consensus       430 m~~~ar~~~-~~FS~e~~~~~~~~~i~~l~~~  460 (463)
T PLN02949        430 IAAAARKRA-NRFSEQRFNEDFKDAIRPILNS  460 (463)
T ss_pred             HHHHHHHHH-HHcCHHHHHHHHHHHHHHHHhh
Confidence            999999998 5699999999999999988764

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.2e-34  Score=263.72  Aligned_cols=226  Identities=21%  Similarity=0.214  Sum_probs=179.5

Q ss_pred             cccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEecc
Q 017085          106 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS  185 (377)
Q Consensus       106 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~  185 (377)
                      ....+|.++++|.++.+.+.+    .++. ..++.+|+||+|.+.+.+...               ....+.++|+++||
T Consensus       186 ~~~~aD~ii~~S~~~~~~~~~----~~~~-~~~~~vi~~gvd~~~~~~~~~---------------~~~~~~~~il~vgr  245 (419)
T cd03806         186 AGSFADVVMVNSTWTRNHIRS----LWKR-NTKPSIVYPPCDVEELLKLPL---------------DEKTRENQILSIAQ  245 (419)
T ss_pred             HhhcCCEEEECCHHHHHHHHH----HhCc-CCCcEEEcCCCCHHHhccccc---------------ccccCCcEEEEEEe
Confidence            346889999999999988865    2332 247999999999876643221               01245678999999


Q ss_pred             ccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcc-cHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHH
Q 017085          186 VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ-TKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLA  262 (377)
Q Consensus       186 ~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~-~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~  262 (377)
                      +.+.||++.+++|+..+.+...+.  ..++++|+|+|++...+ .++.++++++++++++.++|+|+|..  +++.++|+
T Consensus       246 ~~~~K~~~~li~A~~~l~~~~~~~--~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~~l~  323 (419)
T cd03806         246 FRPEKNHPLQLRAFAKLLKRLPEE--IKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLEELS  323 (419)
T ss_pred             ecCCCCHHHHHHHHHHHHHhCccc--ccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHHHHH
Confidence            999999999999999876532110  01359999999875332 24678899999999999999999985  78999999


Q ss_pred             hcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC-ccccee---cCcceeeecCCCCChhHHHHHHHHHhhCHHHHH
Q 017085          263 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG-TTEIVV---NGTTGLLHPVGKEGITPLAKNIVKLATHVERRL  338 (377)
Q Consensus       263 ~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~-~~e~~~---~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~  338 (377)
                      .||++++||.  .|+||++++|||+||+|||+++.|| ..+++.   ++.+|++++  |  +++++++|.+++++++...
T Consensus       324 ~adv~v~~s~--~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d--~~~la~ai~~ll~~~~~~~  397 (419)
T cd03806         324 TASIGLHTMW--NEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--T--AEEYAEAIEKILSLSEEER  397 (419)
T ss_pred             hCeEEEECCc--cCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--C--HHHHHHHHHHHHhCCHHHH
Confidence            9999999999  8999999999999999999999876 467887   789999974  5  9999999999999655444


Q ss_pred             HHHHHHHHHHHHhcCHHHHHH
Q 017085          339 TMGKRGYERVKEIFQEHHMAE  359 (377)
Q Consensus       339 ~~~~~~~~~~~~~f~~~~~~~  359 (377)
                      ++..++++.+.++||++.+.+
T Consensus       398 ~~~~~~~~~~~~~fs~~~f~~  418 (419)
T cd03806         398 LRIRRAARSSVKRFSDEEFER  418 (419)
T ss_pred             HHHHHHHHHHHHhhCHHHhcc
Confidence            444555556778899998753

ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.

>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]

Probab=100.00  E-value=1.4e-35  Score=247.16  Aligned_cols=324  Identities=19%  Similarity=0.177  Sum_probs=243.0

Q ss_pred             CcHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEE------------------ccchhHHHhhhcccEEE
Q 017085            1 MELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS------------------AKGQETINTALKADLIV   62 (377)
Q Consensus         1 ~~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~Div~   62 (377)
                      |+|++.|-+.||.|.++|-..+..       ..-....+|.+++.                  .+.++.+...++..+||
T Consensus        22 y~lSq~li~lghkVvvithayg~r-------~girylt~glkVyylp~~v~~n~tT~ptv~~~~Pllr~i~lrE~I~ivh   94 (426)
T KOG1111|consen   22 YALSQCLIRLGHKVVVITHAYGNR-------VGIRYLTNGLKVYYLPAVVGYNQTTFPTVFSDFPLLRPILLRERIEIVH   94 (426)
T ss_pred             HHhhcchhhcCCeEEEEeccccCc-------cceeeecCCceEEEEeeeeeecccchhhhhccCcccchhhhhhceEEEe
Confidence            468899999999999999443321       11111123333322                  23455566667999999


Q ss_pred             EcCchhhhHHHHHhhcCCCccccceeEEeeeeccc------ccchhhhccccccceeeeeccchhhHhhhhhhhhhhccC
Q 017085           63 LNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGH------YFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKM  136 (377)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~------~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~  136 (377)
                      .|++++...-.+++..+.  .+-+.+++-|.+.+.      +......-.+...|+++|+|...++...-    +-.+++
T Consensus        95 ghs~fS~lahe~l~hart--MGlktVfTdHSlfGfad~~si~~n~ll~~sL~~id~~IcVshtskentvl----r~~L~p  168 (426)
T KOG1111|consen   95 GHSPFSYLAHEALMHART--MGLKTVFTDHSLFGFADIGSILTNKLLPLSLANIDRIICVSHTSKENTVL----RGALAP  168 (426)
T ss_pred             cCChHHHHHHHHHHHHHh--cCceEEEeccccccccchhhhhhcceeeeeecCCCcEEEEeecCCCceEE----EeccCH
Confidence            999876654444433221  234789999976542      22233334456889999999988764332    345688


Q ss_pred             CCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCe
Q 017085          137 PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSV  216 (377)
Q Consensus       137 ~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~  216 (377)
                      +++.+|||.++...|.|......              ..+...++.++|+-.+||+|.+++++.++++       ++|++
T Consensus       169 ~kvsvIPnAv~~~~f~P~~~~~~--------------S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~-------~~p~v  227 (426)
T KOG1111|consen  169 AKVSVIPNAVVTHTFTPDAADKP--------------SADIITIVVASRLVYRKGIDLLLEIIPSVCD-------KHPEV  227 (426)
T ss_pred             hHeeeccceeeccccccCccccC--------------CCCeeEEEEEeeeeeccchHHHHHHHHHHHh-------cCCCe
Confidence            99999999999999887433211              1333788999999999999999999999988       66999


Q ss_pred             EEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEE
Q 017085          217 HAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLG  294 (377)
Q Consensus       217 ~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~  294 (377)
                      +|+|+|+|     +.+..+++..+++.+.++|.++|.+  +++.+.|..-|+|+.||.  .|+|+++++|||+||+|||+
T Consensus       228 rfii~GDG-----Pk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSl--TEafc~~ivEAaScGL~VVs  300 (426)
T KOG1111|consen  228 RFIIIGDG-----PKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSL--TEAFCMVIVEAASCGLPVVS  300 (426)
T ss_pred             eEEEecCC-----cccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHH--HHHHHHHHHHHHhCCCEEEE
Confidence            99999999     5678889999999999999999987  899999999999999999  99999999999999999999


Q ss_pred             eCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcc
Q 017085          295 TAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKS  372 (377)
Q Consensus       295 s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  372 (377)
                      +.+||++|++.++ .-++.++ .  ++++++++++.++.-...   -....+.+.+.|+|+..+++.+++|.++.+.+
T Consensus       301 TrVGGIpeVLP~d-~i~~~~~-~--~~dl~~~v~~ai~~~~~~---p~~~h~~v~~~y~w~dVa~rTekvy~r~~~t~  371 (426)
T KOG1111|consen  301 TRVGGIPEVLPED-MITLGEP-G--PDDLVGAVEKAITKLRTL---PLEFHDRVKKMYSWKDVAERTEKVYDRAATTS  371 (426)
T ss_pred             eecCCccccCCcc-ceeccCC-C--hHHHHHHHHHHHHHhccC---chhHHHHHHHhccHHHHHHHHHHHHHHHhhcc
Confidence            9999999999665 2223333 3  788888888777532211   23345567778999999999999999987655

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.4e-35  Score=269.00  Aligned_cols=321  Identities=18%  Similarity=0.128  Sum_probs=237.4

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhh-hccc-CceE-----EEccchhHHHhhhcccEEEEcCchhhhHHHH
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHK-MWDR-GVQV-----ISAKGQETINTALKADLIVLNTAVAGKWLDA   74 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~-~~~~-~~~~-----~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~   74 (377)
                      +|+++|.+.||+|++++................. .... ....     .............+||+||+++......   
T Consensus        23 ~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~---   99 (365)
T cd03809          23 ELLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPRRLLWGLLFLLRAGDRLLLLLLGLDLLHSPHNTAPLL---   99 (365)
T ss_pred             HHHHHHHhcCCceEEEEecCccccccccchhccccccccccccccchhhHHHHHHHHHhhhcCCCeeeecccccCcc---
Confidence            6899999999999999976543222111100000 0000 0000     0011222333457899999998664433   


Q ss_pred             HhhcCCCccccceeEEeeeecccccc------------hhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEE
Q 017085           75 VLKEDVPRVLPNVLWWIHEMRGHYFK------------LDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVV  142 (377)
Q Consensus        75 ~~~~~~~~~~~~~v~~~h~~~~~~~~------------~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi  142 (377)
                            .....|+++++|+.......            ......+..+|.+++.|....+.+.+    .++.+..++.++
T Consensus       100 ------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~----~~~~~~~~~~vi  169 (365)
T cd03809         100 ------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLR----YLGVPPDKIVVI  169 (365)
T ss_pred             ------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHH----HhCcCHHHEEee
Confidence                  12235889999987532211            12334457889999999998888776    455566789999


Q ss_pred             EcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEe
Q 017085          143 HLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIG  222 (377)
Q Consensus       143 ~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G  222 (377)
                      |||++...+......        . +.......+.++++++|++.+.||++.+++++..+.+       ..++++|+++|
T Consensus       170 ~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~-------~~~~~~l~i~G  233 (365)
T cd03809         170 PLGVDPRFRPPPAEA--------E-VLRALYLLPRPYFLYVGTIEPRKNLERLLEAFARLPA-------KGPDPKLVIVG  233 (365)
T ss_pred             ccccCccccCCCchH--------H-HHHHhcCCCCCeEEEeCCCccccCHHHHHHHHHHHHH-------hcCCCCEEEec
Confidence            999998876443211        1 3334445677899999999999999999999997755       33579999999


Q ss_pred             cCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCc
Q 017085          223 SDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGT  300 (377)
Q Consensus       223 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~  300 (377)
                      .+...    .......+++.+..++|+++|+.  +++.++|+.||++++||.  .|++|++++|||++|+|||+++.++.
T Consensus       234 ~~~~~----~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~--~e~~~~~~~Ea~a~G~pvI~~~~~~~  307 (365)
T cd03809         234 KRGWL----NEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSL--YEGFGLPVLEAMACGTPVIASNISSL  307 (365)
T ss_pred             CCccc----cHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcccch--hccCCCCHHHHhcCCCcEEecCCCCc
Confidence            87543    23333333677888999999998  789999999999999999  89999999999999999999999999


Q ss_pred             ccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 017085          301 TEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIA  362 (377)
Q Consensus       301 ~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~  362 (377)
                      .|++.  .+|+++++.|  .++++++|.++++|++.+.++++++++.+ ++|+|+++++++.
T Consensus       308 ~e~~~--~~~~~~~~~~--~~~~~~~i~~l~~~~~~~~~~~~~~~~~~-~~~sw~~~~~~~~  364 (365)
T cd03809         308 PEVAG--DAALYFDPLD--PEALAAAIERLLEDPALREELRERGLARA-KRFSWEKTARRTL  364 (365)
T ss_pred             cceec--CceeeeCCCC--HHHHHHHHHHHhcCHHHHHHHHHHHHHHH-HhCCHHHHHHHHh
Confidence            99984  4788888887  99999999999999999999999999644 6799999999876

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.

>PLN02846 digalactosyldiacylglycerol synthase

Probab=100.00  E-value=1.1e-34  Score=261.96  Aligned_cols=268  Identities=13%  Similarity=0.091  Sum_probs=195.1

Q ss_pred             hhHHHhhhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccc--------hh----hhccc--cccceee
Q 017085           49 QETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK--------LD----YVKHL--PLVAGAM  114 (377)
Q Consensus        49 ~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~--------~~----~~~~~--~~~~~~~  114 (377)
                      +...++..+||+||++++....|.........+.  .+++.+.|.....|..        ..    ...++  ..++.++
T Consensus       108 i~~~l~~~~pDVIHv~tP~~LG~~~~g~~~~~k~--~~vV~tyHT~y~~Y~~~~~~g~~~~~l~~~~~~~~~r~~~d~vi  185 (462)
T PLN02846        108 ISETIPDEEADIAVLEEPEHLTWYHHGKRWKTKF--RLVIGIVHTNYLEYVKREKNGRVKAFLLKYINSWVVDIYCHKVI  185 (462)
T ss_pred             HHHHHHhcCCCEEEEcCchhhhhHHHHHHHHhcC--CcEEEEECCChHHHHHHhccchHHHHHHHHHHHHHHHHhcCEEE
Confidence            4566677999999999998776752222222211  2377788874433321        10    11222  2368888


Q ss_pred             eeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCC--CeEEEEeccccccchh
Q 017085          115 IDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNE--DLLFAIINSVSRGKGQ  192 (377)
Q Consensus       115 ~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~i~~~G~~~~~Kg~  192 (377)
                      ++|....+ +.+           .+.+..+|+|.+.|.+....         .++..+ +++  .+.++|+||+.+.||+
T Consensus       186 ~pS~~~~~-l~~-----------~~i~~v~GVd~~~f~~~~~~---------~~~~~~-~~~~~~~~~l~vGRL~~eK~~  243 (462)
T PLN02846        186 RLSAATQD-YPR-----------SIICNVHGVNPKFLEIGKLK---------LEQQKN-GEQAFTKGAYYIGKMVWSKGY  243 (462)
T ss_pred             ccCHHHHH-Hhh-----------CEEecCceechhhcCCCccc---------HhhhcC-CCCCcceEEEEEecCcccCCH
Confidence            88875544 221           23444589999987644211         222222 233  3468899999999999


Q ss_pred             HHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCC
Q 017085          193 DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQ  272 (377)
Q Consensus       193 ~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~  272 (377)
                      +.++++++.+.+       +.++++|+|+|+|     +..+++++.++++++..++ |.|. .+..++|+.+|+||+||.
T Consensus       244 ~~Li~a~~~l~~-------~~~~~~l~ivGdG-----p~~~~L~~~a~~l~l~~~v-f~G~-~~~~~~~~~~DvFv~pS~  309 (462)
T PLN02846        244 KELLKLLHKHQK-------ELSGLEVDLYGSG-----EDSDEVKAAAEKLELDVRV-YPGR-DHADPLFHDYKVFLNPST  309 (462)
T ss_pred             HHHHHHHHHHHh-------hCCCeEEEEECCC-----ccHHHHHHHHHhcCCcEEE-ECCC-CCHHHHHHhCCEEEECCC
Confidence            999999997754       3378999999999     5788999999999886444 7775 466689999999999999


Q ss_pred             CCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhc
Q 017085          273 AWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIF  352 (377)
Q Consensus       273 ~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f  352 (377)
                        .|++|++++||||||+|||+++.++ .+++.++.+|+.++  |  .+++++++.++++++.  ..++..++    ++|
T Consensus       310 --~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~--~~~~a~ai~~~l~~~~--~~~~~~a~----~~~  376 (462)
T PLN02846        310 --TDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--D--GKGFVRATLKALAEEP--APLTDAQR----HEL  376 (462)
T ss_pred             --cccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--C--HHHHHHHHHHHHccCc--hhHHHHHH----HhC
Confidence              9999999999999999999999997 59998999998884  4  8999999999998542  23333332    479


Q ss_pred             CHHHHHHHHHHHHHH
Q 017085          353 QEHHMAERIAVVLKE  367 (377)
Q Consensus       353 ~~~~~~~~~~~~~~~  367 (377)
                      ||+..++++.++|+-
T Consensus       377 SWe~~~~~l~~~~~~  391 (462)
T PLN02846        377 SWEAATERFLRVADL  391 (462)
T ss_pred             CHHHHHHHHHHHhcc
Confidence            999999999999963

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1e-34  Score=263.69  Aligned_cols=331  Identities=26%  Similarity=0.336  Sum_probs=252.2

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhh------hhhcccCceE--------EEccchhHHHh--hhcccEEEEcC
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLE------HKMWDRGVQV--------ISAKGQETINT--ALKADLIVLNT   65 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~------~~~~~~~~~~--------~~~~~~~~~~~--~~~~Div~~~~   65 (377)
                      ++++.|.+.||+|++++...............      ..........        .....+..+++  ..+||+||++.
T Consensus        22 ~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~dii~~~~  101 (377)
T cd03798          22 ELARALAKRGVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGPLLYLLAARALLKLLKLKRFRPDLIHAHF  101 (377)
T ss_pred             HHHHHHHHCCCceEEEecCCCCCCchhhcccccccccccccCcchhhccccchhHHHHHHHHHHHHhcccCCCCEEEEec
Confidence            57899999999999999765433221110000      0000000000        00123445556  78999999997


Q ss_pred             chhhhHHHHHhhcCCCccccceeEEeeeeccccc------chhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCe
Q 017085           66 AVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYF------KLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDT  139 (377)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~------~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  139 (377)
                      .....++.......   ...|++++.|+......      .......+..+|.+++.|....+.+.+     .+.+..++
T Consensus       102 ~~~~~~~~~~~~~~---~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~-----~~~~~~~~  173 (377)
T cd03798         102 AYPDGFAAALLKRK---LGIPLVVTLHGSDVNLLPRKRLLRALLRRALRRADAVIAVSEALADELKA-----LGIDPEKV  173 (377)
T ss_pred             cchHHHHHHHHHHh---cCCCEEEEeecchhcccCchhhHHHHHHHHHhcCCeEEeCCHHHHHHHHH-----hcCCCCce
Confidence            65444433332211   12578899998754332      223345567899999999999888775     22567899


Q ss_pred             EEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEE
Q 017085          140 YVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAV  219 (377)
Q Consensus       140 ~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~  219 (377)
                      .++|||+|...+......      ..   +..+...+.+.++++|++.+.||++.+++++..+.+       +.++++++
T Consensus       174 ~~i~~~~~~~~~~~~~~~------~~---~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~-------~~~~~~l~  237 (377)
T cd03798         174 TVIPNGVDTERFSPADRA------EA---RKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLK-------KRPDVHLV  237 (377)
T ss_pred             EEcCCCcCcccCCCcchH------HH---HhccCCCCceEEEEeccCccccCHHHHHHHHHHHHh-------cCCCeEEE
Confidence            999999998876543211      00   344555678999999999999999999999997754       34789999


Q ss_pred             EEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCC
Q 017085          220 IIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA  297 (377)
Q Consensus       220 i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~  297 (377)
                      ++|.+     +..+.+.+.+++.++.++|.+.|+.  +++.++|+.||++++||.  .|++|++++|||++|+|||+++.
T Consensus       238 i~g~~-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~--~~~~~~~~~Ea~~~G~pvI~~~~  310 (377)
T cd03798         238 IVGDG-----PLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSL--REGFGLVLLEAMACGLPVVATDV  310 (377)
T ss_pred             EEcCC-----cchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchh--hccCChHHHHHHhcCCCEEEecC
Confidence            99998     3567788888888888999999987  679999999999999999  89999999999999999999999


Q ss_pred             CCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 017085          298 GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE  367 (377)
Q Consensus       298 ~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~  367 (377)
                      ++..+++.++.+|+++++.|  +++++++|.+++++++.  ++..++++.+.++|+|+.+++++.++|++
T Consensus       311 ~~~~~~~~~~~~g~~~~~~~--~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~  376 (377)
T cd03798         311 GGIPEIITDGENGLLVPPGD--PEALAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLLELYRE  376 (377)
T ss_pred             CChHHHhcCCcceeEECCCC--HHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence            99999999998999999988  99999999999999886  78888999999999999999999999876

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.4e-34  Score=262.91  Aligned_cols=326  Identities=21%  Similarity=0.211  Sum_probs=238.9

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEcc---------------------chhHHH--hhhcc
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK---------------------GQETIN--TALKA   58 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~--~~~~~   58 (377)
                      +++++|.+.||+|++++............. .......++++....                     ......  +..+|
T Consensus        22 ~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (394)
T cd03794          22 ELAEELVKRGHEVTVITGSPNYPSGKIYKG-YKREEVDGVRVHRVPLPPYKKNGLLKRLLNYLSFALSALLALLKRRRRP  100 (394)
T ss_pred             HHHHHHHhCCceEEEEecCCCccccccccc-ceEEecCCeEEEEEecCCCCccchHHHHHhhhHHHHHHHHHHHhcccCC
Confidence            588999999999999996644322211000 000011233321110                     001111  36789


Q ss_pred             cEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeeccccc----------------chhhhccccccceeeeeccchhh
Q 017085           59 DLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYF----------------KLDYVKHLPLVAGAMIDSHVTAE  122 (377)
Q Consensus        59 Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~----------------~~~~~~~~~~~~~~~~~s~~~~~  122 (377)
                      |+||++++..............  ...|++++.|+..+...                .......+..+|.+++.|....+
T Consensus       101 D~v~~~~~~~~~~~~~~~~~~~--~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~  178 (394)
T cd03794         101 DVIIATSPPLLIALAALLLARL--KGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMRE  178 (394)
T ss_pred             CEEEEcCChHHHHHHHHHHHHh--cCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHHHH
Confidence            9999998332222221111111  13588999998643211                11122345788999999999988


Q ss_pred             HhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHH
Q 017085          123 YWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYES  202 (377)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l  202 (377)
                      ++.     ..+.+..++.++|||++...+......       .. +.......+.++++++|++.+.||++.+++++..+
T Consensus       179 ~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l  245 (394)
T cd03794         179 YLV-----RRGVPPEKISVIPNGVDLELFKPPPAD-------ES-LRKELGLDDKFVVLYAGNIGRAQGLDTLLEAAALL  245 (394)
T ss_pred             HHH-----hcCCCcCceEEcCCCCCHHHcCCccch-------hh-hhhccCCCCcEEEEEecCcccccCHHHHHHHHHHH
Confidence            775     345677899999999998876543221       11 34455557789999999999999999999999977


Q ss_pred             HHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCcc--
Q 017085          203 LELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECF--  278 (377)
Q Consensus       203 ~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~--  278 (377)
                      .+       . ++++|+++|.+.     ..+.+.+.+...++ ++|.++|+.  +++.++|+.||++++||.  .+++  
T Consensus       246 ~~-------~-~~~~l~i~G~~~-----~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~~di~i~~~~--~~~~~~  309 (394)
T cd03794         246 KD-------R-PDIRFLIVGDGP-----EKEELKELAKALGL-DNVTFLGRVPKEELPELLAAADVGLVPLK--PGPAFE  309 (394)
T ss_pred             hh-------c-CCeEEEEeCCcc-----cHHHHHHHHHHcCC-CcEEEeCCCChHHHHHHHHhhCeeEEecc--Cccccc
Confidence            54       2 589999999983     55667776666666 579999976  689999999999999999  5654  


Q ss_pred             ---chHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHH
Q 017085          279 ---GRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEH  355 (377)
Q Consensus       279 ---~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~  355 (377)
                         |++++|||++|+|||+++.++..+++.++.+|++++++|  +++++++|.++++|++.+.++++++++.+.++|+|+
T Consensus       310 ~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~--~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~  387 (394)
T cd03794         310 GVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGD--PEALAAAILELLDDPEERAEMGENGRRYVEEKFSRE  387 (394)
T ss_pred             ccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCC--HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhhcHH
Confidence               888999999999999999999999998888999999988  999999999999999999999999999999899999


Q ss_pred             HHHHHH
Q 017085          356 HMAERI  361 (377)
Q Consensus       356 ~~~~~~  361 (377)
                      .+++++
T Consensus       388 ~~~~~~  393 (394)
T cd03794         388 KLAERL  393 (394)
T ss_pred             HHHHhc
Confidence            999886

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5.1e-34  Score=258.05  Aligned_cols=315  Identities=18%  Similarity=0.155  Sum_probs=228.3

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhc-------ccCce-----E------EEccchhHHHhhhcccEEEE
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW-------DRGVQ-----V------ISAKGQETINTALKADLIVL   63 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~-------~~~~~-----~------~~~~~~~~~~~~~~~Div~~   63 (377)
                      +|+++|.++||+|++++...................       .....     .      ........+++..+||+||+
T Consensus        23 ~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii~~  102 (359)
T cd03823          23 DLAEALAKRGHEVAVLTAGEDPPRQDKEVIGVVVYGRPIDEVLRSALPRDLFHLSDYDNPAVVAEFARLLEDFRPDVVHF  102 (359)
T ss_pred             HHHHHHHhcCCceEEEeCCCCCCCcccccccceeeccccccccCCCchhhhhHHHhccCHHHHHHHHHHHHHcCCCEEEE
Confidence            689999999999999996654322211100000000       00000     0      00113345567789999999


Q ss_pred             cCchhhhHH-HHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEE
Q 017085           64 NTAVAGKWL-DAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVV  142 (377)
Q Consensus        64 ~~~~~~~~~-~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi  142 (377)
                      +........ .....    ....|++.++|+......  .........|.+++.|....+.+.+     .+.+..++.++
T Consensus       103 ~~~~~~~~~~~~~~~----~~~~~~i~~~hd~~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~-----~~~~~~~~~vi  171 (359)
T cd03823         103 HHLQGLGVSILRAAR----DRGIPIVLTLHDYWLICP--RQGLFKKGGDAVIAPSRFLLDRYVA-----NGLFAEKISVI  171 (359)
T ss_pred             CCccchHHHHHHHHH----hcCCCEEEEEeeeeeecc--hhhhhccCCCEEEEeCHHHHHHHHH-----cCCCccceEEe
Confidence            985322111 11111    112588999998643221  1111223349999999988887764     33345789999


Q ss_pred             EcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEe
Q 017085          143 HLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIG  222 (377)
Q Consensus       143 ~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G  222 (377)
                      +||+|...+.....               +.+.++++++++|++.+.||++.+++++..+.+         ++++|+++|
T Consensus       172 ~n~~~~~~~~~~~~---------------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~---------~~~~l~i~G  227 (359)
T cd03823         172 RNGIDLDRAKRPRR---------------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR---------GDIELVIVG  227 (359)
T ss_pred             cCCcChhhcccccc---------------CCCCCceEEEEEecCccccCHHHHHHHHHHHHh---------cCcEEEEEc
Confidence            99999987643221               233677899999999999999999999997743         689999999


Q ss_pred             cCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCc
Q 017085          223 SDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGT  300 (377)
Q Consensus       223 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~  300 (377)
                      .+..     ........   +..++|.+.|+.  +++.++|+.||++++||.. .|++|++++|||++|+|||+|+.++.
T Consensus       228 ~~~~-----~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~-~e~~~~~~~Ea~a~G~Pvi~~~~~~~  298 (359)
T cd03823         228 NGLE-----LEEESYEL---EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIW-PENFPLVIREALAAGVPVIASDIGGM  298 (359)
T ss_pred             Cchh-----hhHHHHhh---cCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcc-cCCCChHHHHHHHCCCCEEECCCCCH
Confidence            9843     22222221   556799999997  8899999999999999972 69999999999999999999999999


Q ss_pred             ccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 017085          301 TEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK  366 (377)
Q Consensus       301 ~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  366 (377)
                      .+++.++.+|++++++|  +++++++|.++++|++.+.++++++++...    .+.+++++.++|+
T Consensus       299 ~e~i~~~~~g~~~~~~d--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~  358 (359)
T cd03823         299 AELVRDGVNGLLFPPGD--AEDLAAALERLIDDPDLLERLRAGIEPPRS----IEDQAEEYLKLYR  358 (359)
T ss_pred             HHHhcCCCcEEEECCCC--HHHHHHHHHHHHhChHHHHHHHHhHHHhhh----HHHHHHHHHHHhh
Confidence            99999988999999988  999999999999999999999999887653    3999999999886

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).

>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.5e-34  Score=264.47  Aligned_cols=269  Identities=22%  Similarity=0.217  Sum_probs=212.8

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeeccc--c----cchhhhccccccceeeeeccchhhHhhhhhh
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGH--Y----FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTR  129 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~--~----~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  129 (377)
                      .++|++|.+...........+....  ..++++.+.|+....  .    +.......+..+|.++++|....+++.+   
T Consensus       126 ~~~~v~~sy~~~~~~~~~~~l~~~~--~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~---  200 (407)
T cd04946         126 GQGTVFYSYWLHETAYALALLKKEY--LRKRVISRAHGYDLYEDRYPSGYIPLRRYLLSSLDAVFPCSEQGRNYLQK---  200 (407)
T ss_pred             cCceEEEEecCchHHHHHHHHHHhc--CCceEEEEeccchhhhhhccccchHHHHHHHhcCCEEEECCHHHHHHHHH---
Confidence            4567777765433322222222211  123589999965321  1    1112233457899999999999998876   


Q ss_pred             hhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhh
Q 017085          130 ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEK  209 (377)
Q Consensus       130 ~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~  209 (377)
                       .++...+++.+++||++...+....                 ..++.+.++++|++.+.||++.+++++..+.+     
T Consensus       201 -~~~~~~~ki~vi~~gv~~~~~~~~~-----------------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~-----  257 (407)
T cd04946         201 -RYPAYKEKIKVSYLGVSDPGIISKP-----------------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAK-----  257 (407)
T ss_pred             -HCCCccccEEEEECCcccccccCCC-----------------CCCCCEEEEEeeccccccCHHHHHHHHHHHHH-----
Confidence             5666778899999999876543211                 12567899999999999999999999998765     


Q ss_pred             cccCC--CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHh--cCEEEecCCCCCCccchHHH
Q 017085          210 KLEVP--SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAA--IDVLVQNSQAWGECFGRITI  283 (377)
Q Consensus       210 ~~~~~--~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~--adv~l~ps~~~~e~~~~~~~  283 (377)
                        +.+  +++++++|+|     +..+.+++++++.+..++|+|+|++  +++.++|+.  +|++++||.  .||+|++++
T Consensus       258 --~~p~~~l~~~iiG~g-----~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~--~Eg~p~~ll  328 (407)
T cd04946         258 --ARPSIKIKWTHIGGG-----PLEDTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSE--SEGLPVSIM  328 (407)
T ss_pred             --hCCCceEEEEEEeCc-----hHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCCc--cccccHHHH
Confidence              223  5677889988     5678888888888888899999997  578899975  789999999  999999999


Q ss_pred             HHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 017085          284 EAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIA  362 (377)
Q Consensus       284 Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~  362 (377)
                      |||++|+|||+|+.||..|++.++.+|+++++.+ |+++++++|.++++|++.+.+|+++|++.+.++|+++...+++.
T Consensus       329 EAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~-~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~  406 (407)
T cd04946         329 EAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDP-TPNELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYREFA  406 (407)
T ss_pred             HHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCC-CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence            9999999999999999999999998999998752 28999999999999999999999999999999999999998875

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.

>PHA01630 putative group 1 glycosyl transferase

Probab=100.00  E-value=2.7e-34  Score=253.29  Aligned_cols=263  Identities=17%  Similarity=0.175  Sum_probs=192.3

Q ss_pred             cccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccchhhhcc--ccccceeeeeccchhhHhhhhhhhhhhc
Q 017085           57 KADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKH--LPLVAGAMIDSHVTAEYWKNRTRERLRI  134 (377)
Q Consensus        57 ~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~  134 (377)
                      ++...+.|+...+++.+.    .++..+++++++.|+..  .....+..+  ...+|.++++|+...+.+.+     .++
T Consensus        46 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~e~~~~~--~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~-----~g~  114 (331)
T PHA01630         46 GYPIYIYYTIFNSMLFWK----GIPHVGKNIVFEVADTD--AISHTALYFFRNQPVDEIVVPSQWSKNAFYT-----SGL  114 (331)
T ss_pred             CCceeeehhhhhHHHHHh----hccccCCceEEEEEeec--hhhHHHHHHHhhccCCEEEECCHHHHHHHHH-----cCC
Confidence            555566676554444443    33445568899999842  233333333  36899999999999988764     344


Q ss_pred             c-CCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccC
Q 017085          135 K-MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEV  213 (377)
Q Consensus       135 ~-~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~  213 (377)
                      + ..++.+||||+|.+.|.+....                ..+.++++++|++.++||++.+++|++.+.+       +.
T Consensus       115 ~~~~~i~vIpNGVd~~~f~~~~~~----------------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~-------~~  171 (331)
T PHA01630        115 KIPQPIYVIPHNLNPRMFEYKPKE----------------KPHPCVLAILPHSWDRKGGDIVVKIFHELQN-------EG  171 (331)
T ss_pred             CCCCCEEEECCCCCHHHcCCCccc----------------cCCCEEEEEeccccccCCHHHHHHHHHHHHh-------hC
Confidence            3 4689999999998877533210                1345777788899999999999999997754       34


Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEE
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL  293 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI  293 (377)
                      ++++++++|++.     ...++      .++.. +......+++..+|+.||++++||.  .|+||++++||||||+|||
T Consensus       172 ~~~~llivG~~~-----~~~~l------~~~~~-~~~~v~~~~l~~~y~~aDv~v~pS~--~E~fgl~~lEAMA~G~PVI  237 (331)
T PHA01630        172 YDFYFLIKSSNM-----LDPRL------FGLNG-VKTPLPDDDIYSLFAGCDILFYPVR--GGAFEIPVIEALALGLDVV  237 (331)
T ss_pred             CCEEEEEEeCcc-----cchhh------ccccc-eeccCCHHHHHHHHHhCCEEEECCc--cccCChHHHHHHHcCCCEE
Confidence            789999999752     11111      12221 1111223789999999999999999  8999999999999999999


Q ss_pred             EeCCCCcccceecCcceeeecCC-----------------CCChhHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHhcCH
Q 017085          294 GTAAGGTTEIVVNGTTGLLHPVG-----------------KEGITPLAKNIVKLATHV--ERRLTMGKRGYERVKEIFQE  354 (377)
Q Consensus       294 ~s~~~~~~e~~~~~~~g~~~~~~-----------------~~~~~~la~~i~~l~~~~--~~~~~~~~~~~~~~~~~f~~  354 (377)
                      +|+.||..|++.++.+|++++.+                 +.+.+++++++.+++.|+  +.+.++..++...+.++|||
T Consensus       238 as~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~  317 (331)
T PHA01630        238 VTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSY  317 (331)
T ss_pred             EeCCCCchhhccCCCceEEeeecccccccccCCcccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCH
Confidence            99999999999998888777532                 112788999999988863  44555555555667789999


Q ss_pred             HHHHHHHHHHHHH
Q 017085          355 HHMAERIAVVLKE  367 (377)
Q Consensus       355 ~~~~~~~~~~~~~  367 (377)
                      ++++++++++|++
T Consensus       318 ~~ia~k~~~l~~~  330 (331)
T PHA01630        318 NAIAKMWEKILEK  330 (331)
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999999974

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

Probab=100.00  E-value=1.7e-33  Score=256.29  Aligned_cols=263  Identities=20%  Similarity=0.283  Sum_probs=210.7

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeeccccc--------c---hhhhccccccceeeeeccchhhHh
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYF--------K---LDYVKHLPLVAGAMIDSHVTAEYW  124 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~--------~---~~~~~~~~~~~~~~~~s~~~~~~~  124 (377)
                      .++|+++++.+....+..  .....+   .+.+.++|+......        .   ......+..+|.+++.|....+.+
T Consensus        98 ~~~diii~~~~~~~~~~~--~~~~~~---~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~l  172 (372)
T cd04949          98 TKPDVFILDRPTLDGQAL--LNMKKA---AKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQDL  172 (372)
T ss_pred             CCCCEEEECCccccchhH--HhccCC---ceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHHH
Confidence            789999999876554411  111111   246677775432111        1   111233568899999999888877


Q ss_pred             hhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHH
Q 017085          125 KNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLE  204 (377)
Q Consensus       125 ~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~  204 (377)
                      .+    .++. ..++.++|||++...+.+...                .......++++||+.+.||++.+++++..+.+
T Consensus       173 ~~----~~~~-~~~v~~ip~g~~~~~~~~~~~----------------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~  231 (372)
T cd04949         173 QK----QFGN-YNPIYTIPVGSIDPLKLPAQF----------------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVK  231 (372)
T ss_pred             HH----HhCC-CCceEEEcccccChhhcccch----------------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHH
Confidence            65    3332 234899999999876543210                01455788999999999999999999998765


Q ss_pred             HHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHH
Q 017085          205 LIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIE  284 (377)
Q Consensus       205 ~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~E  284 (377)
                             +.++++|+|+|.|.     ....+...+++++++++|.+.|+.+++.++|+.||++++||.  .||+|++++|
T Consensus       232 -------~~~~~~l~i~G~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~S~--~Eg~~~~~lE  297 (372)
T cd04949         232 -------QVPDATLDIYGYGD-----EEEKLKELIEELGLEDYVFLKGYTRDLDEVYQKAQLSLLTSQ--SEGFGLSLME  297 (372)
T ss_pred             -------hCCCcEEEEEEeCc-----hHHHHHHHHHHcCCcceEEEcCCCCCHHHHHhhhhEEEeccc--ccccChHHHH
Confidence                   44899999999983     456778888889999999999988999999999999999999  8999999999


Q ss_pred             HHHcCCcEEEeCCC-CcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 017085          285 AMAFQLPVLGTAAG-GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERI  361 (377)
Q Consensus       285 a~a~g~PvI~s~~~-~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~  361 (377)
                      ||++|+|||+++.+ |..+++.++.+|++++++|  +++++++|.+++++++.+.++++++++. .++|||+.++++|
T Consensus       298 Ama~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d--~~~la~~i~~ll~~~~~~~~~~~~a~~~-~~~~s~~~~~~~w  372 (372)
T cd04949         298 ALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGD--IEALAEAIIELLNDPKLLQKFSEAAYEN-AERYSEENVWEKW  372 (372)
T ss_pred             HHhCCCCEEEecCCCCcHHHcccCCCceEeCCCc--HHHHHHHHHHHHcCHHHHHHHHHHHHHH-HHHhhHHHHHhcC
Confidence            99999999999987 7899999999999999988  9999999999999999999999999998 5779999998875

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra

>PLN02501 digalactosyldiacylglycerol synthase

Probab=100.00  E-value=1e-32  Score=252.46  Aligned_cols=267  Identities=12%  Similarity=0.112  Sum_probs=197.6

Q ss_pred             chhHHHhhhcccEEEEcCchhhhHH--HHHhhcCCCccccceeEEeeeecccccc--------h----hhhccccc--cc
Q 017085           48 GQETINTALKADLIVLNTAVAGKWL--DAVLKEDVPRVLPNVLWWIHEMRGHYFK--------L----DYVKHLPL--VA  111 (377)
Q Consensus        48 ~~~~~~~~~~~Div~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~~~~--------~----~~~~~~~~--~~  111 (377)
                      .+...+...+|||||+++|....|.  ........    .|++..+|.....|..        .    ..++++.+  ++
T Consensus       425 dI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl----~PVVasyHTny~eYl~~y~~g~L~~~llk~l~~~v~r~hcD  500 (794)
T PLN02501        425 DTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKF----NHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCH  500 (794)
T ss_pred             HHHHHhhccCCCEEEECCchhhccHHHHHHHHHHc----CCeEEEEeCCcHHHHhHhcchhHHHHHHHHHHHHHHHhhCC
Confidence            4556677889999999998865555  22122222    2678888865543322        1    11123333  68


Q ss_pred             eeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccch
Q 017085          112 GAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKG  191 (377)
Q Consensus       112 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg  191 (377)
                      .++++|..+.+ +          +...+..+ ||||.++|.+...        ...+..++++.....++|+||+.+.||
T Consensus       501 ~VIaPS~atq~-L----------~~~vI~nV-nGVDte~F~P~~r--------~~~~r~lgi~~~~kgiLfVGRLa~EKG  560 (794)
T PLN02501        501 KVLRLSAATQD-L----------PKSVICNV-HGVNPKFLKIGEK--------VAEERELGQQAFSKGAYFLGKMVWAKG  560 (794)
T ss_pred             EEEcCCHHHHH-h----------cccceeec-ccccccccCCcch--------hHHHHhcCCccccCceEEEEcccccCC
Confidence            89999966653 1          11222222 6999998876532        122345676554556789999999999


Q ss_pred             hHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecC
Q 017085          192 QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNS  271 (377)
Q Consensus       192 ~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps  271 (377)
                      ++.++++++.+.+       +.++++|+|+|+|     +..+.+++++.++++  +|.|+|..++..++|+.+|+||+||
T Consensus       561 ld~LLeAla~L~~-------~~pnvrLvIVGDG-----P~reeLe~la~eLgL--~V~FLG~~dd~~~lyasaDVFVlPS  626 (794)
T PLN02501        561 YRELIDLLAKHKN-------ELDGFNLDVFGNG-----EDAHEVQRAAKRLDL--NLNFLKGRDHADDSLHGYKVFINPS  626 (794)
T ss_pred             HHHHHHHHHHHHh-------hCCCeEEEEEcCC-----ccHHHHHHHHHHcCC--EEEecCCCCCHHHHHHhCCEEEECC
Confidence            9999999997754       3378999999999     567889999998887  4999999888889999999999999


Q ss_pred             CCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHh
Q 017085          272 QAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEI  351 (377)
Q Consensus       272 ~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~  351 (377)
                      .  .|+||++++||||||+|||+++.++.. ++.++.+|+++  +|  .++++++|.++++++..+..+..      ...
T Consensus       627 ~--sEgFGlVlLEAMA~GlPVVATd~pG~e-~V~~g~nGll~--~D--~EafAeAI~~LLsd~~~rl~~~a------~~~  693 (794)
T PLN02501        627 I--SDVLCTATAEALAMGKFVVCADHPSNE-FFRSFPNCLTY--KT--SEDFVAKVKEALANEPQPLTPEQ------RYN  693 (794)
T ss_pred             C--cccchHHHHHHHHcCCCEEEecCCCCc-eEeecCCeEec--CC--HHHHHHHHHHHHhCchhhhHHHH------Hhh
Confidence            9  999999999999999999999999854 46677788765  45  99999999999998764433321      236


Q ss_pred             cCHHHHHHHHHHHH
Q 017085          352 FQEHHMAERIAVVL  365 (377)
Q Consensus       352 f~~~~~~~~~~~~~  365 (377)
                      |||+.+++++++.-
T Consensus       694 ~SWeAaadrLle~~  707 (794)
T PLN02501        694 LSWEAATQRFMEYS  707 (794)
T ss_pred             CCHHHHHHHHHHhh
Confidence            99999999999864

>PHA01633 putative glycosyl transferase group 1

Probab=100.00  E-value=3.5e-31  Score=230.47  Aligned_cols=241  Identities=18%  Similarity=0.183  Sum_probs=179.5

Q ss_pred             cceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhH
Q 017085           85 PNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLR  164 (377)
Q Consensus        85 ~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~  164 (377)
                      .+++.+.|+...   ...+.+.+.+-+.++++|+.+++.+.     +.|++.+  .+|++|+|.+.|.+....      .
T Consensus        71 ~~~~tt~~g~~~---~~~y~~~m~~~~~vIavS~~t~~~L~-----~~G~~~~--i~I~~GVD~~~f~p~~~~------~  134 (335)
T PHA01633         71 KYFYTTCDGIPN---IEIVNKYLLQDVKFIPNSKFSAENLQ-----EVGLQVD--LPVFHGINFKIVENAEKL------V  134 (335)
T ss_pred             CceEEeeCCcCc---hHHHHHHHhcCCEEEeCCHHHHHHHH-----HhCCCCc--eeeeCCCChhhcCccchh------h
Confidence            578888887643   24555666667799999999988876     3455544  357899999877643211      2


Q ss_pred             HHHHHHhCCC-CCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcC
Q 017085          165 EHVRESLGVR-NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK  243 (377)
Q Consensus       165 ~~~r~~~~~~-~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~  243 (377)
                      ..+|++++.. ++.++++++||+.++||++.+++|++.+.+...+.   ..+++++++|.+             ..++++
T Consensus       135 ~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~---~~~i~l~ivG~~-------------~~~~l~  198 (335)
T PHA01633        135 PQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDI---AKKIHFFVISHK-------------QFTQLE  198 (335)
T ss_pred             HHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCc---cccEEEEEEcHH-------------HHHHcC
Confidence            3456666653 46788999999999999999999999876522100   014677777742             124567


Q ss_pred             CCCcEEEec---Cc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceec------------
Q 017085          244 IQDRVHFVN---KT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN------------  306 (377)
Q Consensus       244 ~~~~v~~~g---~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~------------  306 (377)
                      ++++|+|+|   ..  +++.++|+.||++|+||.  .||||++++|||+||+|||+|+.++++|++.+            
T Consensus       199 l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~--~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~  276 (335)
T PHA01633        199 VPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSG--TEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVE  276 (335)
T ss_pred             CCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCc--cccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHH
Confidence            788999995   32  679999999999999999  99999999999999999999999998886431            


Q ss_pred             ------CcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 017085          307 ------GTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAV  363 (377)
Q Consensus       307 ------~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~  363 (377)
                            .+.||.++..|  +++|+++|.++++..+ ....+.++++.+ ++|+|++++++|++
T Consensus       277 ~~~~~~~g~g~~~~~~d--~~~la~ai~~~~~~~~-~~~~~~~~~~~a-~~f~~~~~~~~~~~  335 (335)
T PHA01633        277 EYYDKEHGQKWKIHKFQ--IEDMANAIILAFELQD-REERSMKLKELA-KKYDIRNLYTRFLE  335 (335)
T ss_pred             HhcCcccCceeeecCCC--HHHHHHHHHHHHhccC-hhhhhHHHHHHH-HhcCHHHHHHHhhC
Confidence                  23467777777  9999999999865322 223366777655 56999999999864

>PLN02275 transferase, transferring glycosyl groups

Probab=100.00  E-value=1.3e-31  Score=242.55  Aligned_cols=245  Identities=13%  Similarity=0.103  Sum_probs=175.6

Q ss_pred             hhhcccEEEEcCchhhh--HHHHHhhcCCCccccceeEEeeeeccccc--------------chhhhccccccceeeeec
Q 017085           54 TALKADLIVLNTAVAGK--WLDAVLKEDVPRVLPNVLWWIHEMRGHYF--------------KLDYVKHLPLVAGAMIDS  117 (377)
Q Consensus        54 ~~~~~Div~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~h~~~~~~~--------------~~~~~~~~~~~~~~~~~s  117 (377)
                      +..+||+||+|++.+..  +...+... .  ...|++.+.|+.+....              .......++.+|.+++.|
T Consensus        97 ~~~~~DvV~~~~~~~~~~~~~~~~~~~-~--~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S  173 (371)
T PLN02275         97 KIPRPDVFLVQNPPSVPTLAVVKLACW-L--RRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADGHLCVT  173 (371)
T ss_pred             hCCCCCEEEEeCCCCcHHHHHHHHHHH-H--hCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECC
Confidence            45799999998754321  11111111 1  12478888897631110              111223457789999999


Q ss_pred             cchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHH
Q 017085          118 HVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLH  197 (377)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~  197 (377)
                      +...+.+.+    .+|++   +.+||||. .+.|.+....           ..+. ++...+++++||+.+.||++.+++
T Consensus       174 ~~~~~~l~~----~~g~~---i~vi~n~~-~~~f~~~~~~-----------~~~~-~~~~~~i~~~grl~~~k~~~~li~  233 (371)
T PLN02275        174 KAMQHELDQ----NWGIR---ATVLYDQP-PEFFRPASLE-----------IRLR-PNRPALVVSSTSWTPDEDFGILLE  233 (371)
T ss_pred             HHHHHHHHH----hcCCC---eEEECCCC-HHHcCcCCch-----------hccc-CCCcEEEEEeCceeccCCHHHHHH
Confidence            999888764    34543   88999985 3444322110           0011 134467788999999999999999


Q ss_pred             HHHHHHHHHhhhc----------ccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEec-Cc--CCHHHHHHhc
Q 017085          198 SFYESLELIKEKK----------LEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN-KT--LTVAPYLAAI  264 (377)
Q Consensus       198 a~~~l~~~l~~~~----------~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g-~~--~~~~~~~~~a  264 (377)
                      |+..+...+....          .+.++++|+|+|+|     +..++++++++++++++ ++|.+ +.  +++..+|+.|
T Consensus       234 a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G-----~~~~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l~~a  307 (371)
T PLN02275        234 AAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKG-----PQKAMYEEKISRLNLRH-VAFRTMWLEAEDYPLLLGSA  307 (371)
T ss_pred             HHHHHHhhhhhccccccccccccccCCCeEEEEEeCC-----CCHHHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHHHhC
Confidence            9987643221100          02378999999999     56789999999999975 88766 33  8999999999


Q ss_pred             CEEEecCCC-CCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHh
Q 017085          265 DVLVQNSQA-WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLA  331 (377)
Q Consensus       265 dv~l~ps~~-~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~  331 (377)
                      |++++|+.. +.|++|++++||||||+|||+++.|+.+|++.++.+|++++  +  +++|+++|.+++
T Consensus       308 Dv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~--~~~la~~i~~l~  371 (371)
T PLN02275        308 DLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--S--SSELADQLLELL  371 (371)
T ss_pred             CEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--C--HHHHHHHHHHhC
Confidence            999986431 25889999999999999999999999999999999999997  4  899999998764

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=4.6e-30  Score=231.76  Aligned_cols=199  Identities=23%  Similarity=0.286  Sum_probs=163.0

Q ss_pred             cccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEecc
Q 017085          106 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS  185 (377)
Q Consensus       106 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~  185 (377)
                      .+..+|.++++|..+++.+.+    .++   .+..+++||+|.+.+.+..                   .....++++|+
T Consensus       150 ~~~~~d~ii~~S~~~~~~~~~----~~~---~~~~vi~~~~d~~~~~~~~-------------------~~~~~il~~G~  203 (351)
T cd03804         150 SAARVDYFIANSRFVARRIKK----YYG---RDATVIYPPVDTDRFTPAE-------------------EKEDYYLSVGR  203 (351)
T ss_pred             HhcCCCEEEECCHHHHHHHHH----HhC---CCcEEECCCCCHhhcCcCC-------------------CCCCEEEEEEc
Confidence            347899999999999988865    333   3468999999987664321                   23346889999


Q ss_pred             ccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHh
Q 017085          186 VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAA  263 (377)
Q Consensus       186 ~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~  263 (377)
                      +.+.||++.+++++..+           + ++|+|+|+|     +..+.+++     +..++|+|+|++  +++.++|+.
T Consensus       204 ~~~~K~~~~li~a~~~~-----------~-~~l~ivG~g-----~~~~~l~~-----~~~~~V~~~g~~~~~~~~~~~~~  261 (351)
T cd03804         204 LVPYKRIDLAIEAFNKL-----------G-KRLVVIGDG-----PELDRLRA-----KAGPNVTFLGRVSDEELRDLYAR  261 (351)
T ss_pred             CccccChHHHHHHHHHC-----------C-CcEEEEECC-----hhHHHHHh-----hcCCCEEEecCCCHHHHHHHHHh
Confidence            99999999999999854           5 899999998     34455544     446799999998  559999999


Q ss_pred             cCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHH
Q 017085          264 IDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKR  343 (377)
Q Consensus       264 adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~  343 (377)
                      ||++++||.   |++|++++|||+||+|||+++.++..|++.++.+|++++++|  +++++++|.+++++++   .++++
T Consensus       262 ad~~v~ps~---e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~--~~~la~~i~~l~~~~~---~~~~~  333 (351)
T cd03804         262 ARAFLFPAE---EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQT--VESLAAAVERFEKNED---FDPQA  333 (351)
T ss_pred             CCEEEECCc---CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCC--HHHHHHHHHHHHhCcc---cCHHH
Confidence            999999985   999999999999999999999999999999999999999888  9999999999999884   23334


Q ss_pred             HHHHHHHhcCHHHHHHHH
Q 017085          344 GYERVKEIFQEHHMAERI  361 (377)
Q Consensus       344 ~~~~~~~~f~~~~~~~~~  361 (377)
                      +++.+ ++|+|+++.+++
T Consensus       334 ~~~~~-~~~~~~~~~~~~  350 (351)
T cd03804         334 IRAHA-ERFSESRFREKI  350 (351)
T ss_pred             HHHHH-HhcCHHHHHHHh
Confidence            44444 459999998875

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed

Probab=99.97  E-value=6.3e-29  Score=229.57  Aligned_cols=329  Identities=15%  Similarity=0.131  Sum_probs=219.2

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceE--EEcc---chhHHHhhhcccEEEEcCchhhhHHHHHh
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--ISAK---GQETINTALKADLIVLNTAVAGKWLDAVL   76 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~Div~~~~~~~~~~~~~~~   76 (377)
                      .|++.|++.++++.++.+...+......    ......++.+  .+..   ....+++..+||+||++...  .|...+.
T Consensus        68 ~l~~~l~~~~~~~~i~~t~~t~~~~~~~----~~~~~~~~~~~~~P~d~~~~~~~~l~~~~Pd~v~~~~~~--~~~~~l~  141 (425)
T PRK05749         68 PLIRALRKRYPDLPILVTTMTPTGSERA----QALFGDDVEHRYLPYDLPGAVRRFLRFWRPKLVIIMETE--LWPNLIA  141 (425)
T ss_pred             HHHHHHHHhCCCCcEEEeCCCccHHHHH----HHhcCCCceEEEecCCcHHHHHHHHHhhCCCEEEEEecc--hhHHHHH
Confidence            4788998888775554332222222211    1111223333  3322   44566788999999988432  1222111


Q ss_pred             hcCCCccccceeEEeeeecccc------cchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhh
Q 017085           77 KEDVPRVLPNVLWWIHEMRGHY------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKEL  150 (377)
Q Consensus        77 ~~~~~~~~~~~v~~~h~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~  150 (377)
                      ....  ...|++.+.|.+....      +....+..++.+|.+++.|+...+.+.     .+|++.+ +.+++|+ +.+.
T Consensus       142 ~~~~--~~ip~vl~~~~~~~~s~~~~~~~~~~~r~~~~~~d~ii~~S~~~~~~l~-----~~g~~~~-i~vi~n~-~~d~  212 (425)
T PRK05749        142 ELKR--RGIPLVLANARLSERSFKRYQKFKRFYRLLFKNIDLVLAQSEEDAERFL-----ALGAKNE-VTVTGNL-KFDI  212 (425)
T ss_pred             HHHH--CCCCEEEEeccCChhhHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHH-----HcCCCCC-cEecccc-cccC
Confidence            1111  1235555444322111      222334556788999999999988876     4566666 8899885 2322


Q ss_pred             HHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccH
Q 017085          151 MEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK  230 (377)
Q Consensus       151 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~  230 (377)
                      +.....    ......+|+.++  ++.++++++|+.  .|+.+.+++|+..+.+       +.++++|+|+|+|     +
T Consensus       213 ~~~~~~----~~~~~~~r~~~~--~~~~vil~~~~~--~~~~~~ll~A~~~l~~-------~~~~~~liivG~g-----~  272 (425)
T PRK05749        213 EVPPEL----AARAATLRRQLA--PNRPVWIAASTH--EGEEELVLDAHRALLK-------QFPNLLLILVPRH-----P  272 (425)
T ss_pred             CCChhh----HHHHHHHHHHhc--CCCcEEEEeCCC--chHHHHHHHHHHHHHH-------hCCCcEEEEcCCC-----h
Confidence            211110    112345677776  355677787764  5889999999997754       3489999999998     3


Q ss_pred             HH-HHHHHHHHhcCCCC-------------cEEEecCcCCHHHHHHhcCEEEe-cCCCCCCccchHHHHHHHcCCcEEEe
Q 017085          231 FE-SELRNYVMQKKIQD-------------RVHFVNKTLTVAPYLAAIDVLVQ-NSQAWGECFGRITIEAMAFQLPVLGT  295 (377)
Q Consensus       231 ~~-~~l~~~~~~~~~~~-------------~v~~~g~~~~~~~~~~~adv~l~-ps~~~~e~~~~~~~Ea~a~g~PvI~s  295 (377)
                      .+ +++++.++++|+..             .|.+.+..+++..+|+.||++++ +|.  .|++|.+++|||+||+|||++
T Consensus       273 ~r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~~S~--~e~~g~~~lEAma~G~PVI~g  350 (425)
T PRK05749        273 ERFKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVGGSL--VKRGGHNPLEPAAFGVPVISG  350 (425)
T ss_pred             hhHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEECCCc--CCCCCCCHHHHHHhCCCEEEC
Confidence            43 67899999888752             34444445689999999999655 666  789999999999999999998


Q ss_pred             CC-CCcccceecC-cceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcc
Q 017085          296 AA-GGTTEIVVNG-TTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKS  372 (377)
Q Consensus       296 ~~-~~~~e~~~~~-~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  372 (377)
                      +. ++..++.... .+|+++.++|  +++|+++|.++++|++.+.+|++++++.+.++   ....+++.+.+.+.+++.
T Consensus       351 ~~~~~~~e~~~~~~~~g~~~~~~d--~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~---~~~~~~~~~~l~~~l~~~  424 (425)
T PRK05749        351 PHTFNFKEIFERLLQAGAAIQVED--AEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN---QGALQRTLQLLEPYLPPL  424 (425)
T ss_pred             CCccCHHHHHHHHHHCCCeEEECC--HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC---ccHHHHHHHHHHHhcccC
Confidence            64 5566665442 4688888877  99999999999999999999999999988764   467788888887776554

>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.97  E-value=3.4e-28  Score=222.63  Aligned_cols=289  Identities=17%  Similarity=0.142  Sum_probs=206.3

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc-------cchhhhccccccceeeeeccchhhHhhhhh
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRT  128 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~-------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~  128 (377)
                      ..-|+|++|+..... +...++...+.  .++.+..|-.++..       +.....+-+-.+|.+-..+...+..|....
T Consensus       126 ~~~d~vwvhDYhl~l-~p~~lr~~~~~--~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~  202 (456)
T TIGR02400       126 QPGDIVWVHDYHLML-LPAMLRELGVQ--NKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAV  202 (456)
T ss_pred             CCCCEEEEecchhhH-HHHHHHhhCCC--CeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHH
Confidence            345899999865332 33333333433  47888888654322       122233334577888888887777776655


Q ss_pred             hhhhhc-----------cCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHH
Q 017085          129 RERLRI-----------KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLH  197 (377)
Q Consensus       129 ~~~~~~-----------~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~  197 (377)
                      .+.+|.           ...++.++|||+|++.|.+.............+|+++   .+.++|+++||+++.||++.+++
T Consensus       203 ~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VgRLd~~KGi~~ll~  279 (456)
T TIGR02400       203 SRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESL---KGRKLIIGVDRLDYSKGLPERLL  279 (456)
T ss_pred             HHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHc---CCCeEEEEccccccccCHHHHHH
Confidence            544442           3346889999999999876543322222234567666   36688999999999999999999


Q ss_pred             HHHHHHHHHhhhcccCCC----eEEEEEecCCCcccHHHHHHHHHHHhc--------CCCC--cEEEec-C--cCCHHHH
Q 017085          198 SFYESLELIKEKKLEVPS----VHAVIIGSDMNAQTKFESELRNYVMQK--------KIQD--RVHFVN-K--TLTVAPY  260 (377)
Q Consensus       198 a~~~l~~~l~~~~~~~~~----~~l~i~G~~~~~~~~~~~~l~~~~~~~--------~~~~--~v~~~g-~--~~~~~~~  260 (377)
                      |++.+++       ++|+    +.|+++|....++.+.+.++++.++++        +..+  .+++++ .  .+++.++
T Consensus       280 A~~~ll~-------~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~al  352 (456)
T TIGR02400       280 AFERFLE-------EHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMAL  352 (456)
T ss_pred             HHHHHHH-------hCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHH
Confidence            9998765       2343    668877643222223445555555443        1111  145554 3  3889999


Q ss_pred             HHhcCEEEecCCCCCCccchHHHHHHHcCCc----EEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhh-CHH
Q 017085          261 LAAIDVLVQNSQAWGECFGRITIEAMAFQLP----VLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVE  335 (377)
Q Consensus       261 ~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~P----vI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~-~~~  335 (377)
                      |+.||++++||.  .||||++++||||||+|    +|+|+.+|..+.+.   +|+++++.|  ++++|++|.++++ +++
T Consensus       353 y~aaDv~vv~S~--~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d--~~~lA~aI~~aL~~~~~  425 (456)
T TIGR02400       353 YRAADVGLVTPL--RDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYD--IDGMADAIARALTMPLE  425 (456)
T ss_pred             HHhCcEEEECcc--ccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCC--HHHHHHHHHHHHcCCHH
Confidence            999999999999  99999999999999999    99999888888773   789999998  9999999999998 677


Q ss_pred             HHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017085          336 RRLTMGKRGYERVKEIFQEHHMAERIAVVL  365 (377)
Q Consensus       336 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~  365 (377)
                      ++.++.+.+++++. +||+..+++++.+-+
T Consensus       426 er~~r~~~~~~~v~-~~~~~~W~~~~l~~l  454 (456)
T TIGR02400       426 EREERHRAMMDKLR-KNDVQRWREDFLSDL  454 (456)
T ss_pred             HHHHHHHHHHHHHh-hCCHHHHHHHHHHHh
Confidence            88888999999875 499999999988643

This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib

>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor

Probab=99.97  E-value=1.1e-28  Score=227.98  Aligned_cols=292  Identities=16%  Similarity=0.103  Sum_probs=201.3

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc--c-----chhhhccccccceeeeeccchhhHhhhhh
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY--F-----KLDYVKHLPLVAGAMIDSHVTAEYWKNRT  128 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~--~-----~~~~~~~~~~~~~~~~~s~~~~~~~~~~~  128 (377)
                      ...|+|++|+...... ...++...+.  .++++..|-.++..  +     .......+-.+|.+...+......+.+..
T Consensus       130 ~~~d~iwihDyhl~ll-p~~lr~~~~~--~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~  206 (460)
T cd03788         130 RPGDLVWVHDYHLLLL-PQMLRERGPD--ARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCC  206 (460)
T ss_pred             CCCCEEEEeChhhhHH-HHHHHhhCCC--CeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHH
Confidence            3579999998753332 2333333332  47888899654322  1     11222333456777777765555544433


Q ss_pred             hhhhhc------------cCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHH
Q 017085          129 RERLRI------------KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFL  196 (377)
Q Consensus       129 ~~~~~~------------~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll  196 (377)
                      .+.++.            ...++.++|||+|++.|.+.....   ..+..+++..+..++.++|+++||+.+.||++.++
T Consensus       207 ~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll  283 (460)
T cd03788         207 SRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASP---EVQERAAELRERLGGRKLIVGVDRLDYSKGIPERL  283 (460)
T ss_pred             HHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCc---hhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHH
Confidence            222221            224689999999999887653221   11233444455567788999999999999999999


Q ss_pred             HHHHHHHHHHhhhcccCCCeEEEEEecCCCcc----cHHHHHHHHHHHhcCCC------CcEEEe-cC--cCCHHHHHHh
Q 017085          197 HSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ----TKFESELRNYVMQKKIQ------DRVHFV-NK--TLTVAPYLAA  263 (377)
Q Consensus       197 ~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~----~~~~~~l~~~~~~~~~~------~~v~~~-g~--~~~~~~~~~~  263 (377)
                      +|++.+++...+.   ..+++|+++|.+..++    ..+.+++++++.+++..      ..|+++ |.  .+++.++|+.
T Consensus       284 ~A~~~ll~~~p~~---~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~  360 (460)
T cd03788         284 LAFERLLERYPEW---RGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRA  360 (460)
T ss_pred             HHHHHHHHhChhh---cCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHh
Confidence            9999876522110   0136788887643221    12444555555443321      235544 54  3889999999


Q ss_pred             cCEEEecCCCCCCccchHHHHHHHcCCc----EEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhC-HHHHH
Q 017085          264 IDVLVQNSQAWGECFGRITIEAMAFQLP----VLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH-VERRL  338 (377)
Q Consensus       264 adv~l~ps~~~~e~~~~~~~Ea~a~g~P----vI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~-~~~~~  338 (377)
                      ||++++||.  .||||++++|||+||+|    ||+|+.+|..+.   +.+|+++++.|  +++++++|.+++++ ++++.
T Consensus       361 aDv~v~pS~--~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~d--~~~la~ai~~~l~~~~~e~~  433 (460)
T cd03788         361 ADVALVTPL--RDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPYD--IDEVADAIHRALTMPLEERR  433 (460)
T ss_pred             ccEEEeCcc--ccccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCCC--HHHHHHHHHHHHcCCHHHHH
Confidence            999999999  99999999999999999    999998887776   45899999998  99999999999984 57788


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHH
Q 017085          339 TMGKRGYERVKEIFQEHHMAERIAVV  364 (377)
Q Consensus       339 ~~~~~~~~~~~~~f~~~~~~~~~~~~  364 (377)
                      .++.++++.+ ++|+++.+++++..-
T Consensus       434 ~~~~~~~~~v-~~~~~~~w~~~~l~~  458 (460)
T cd03788         434 ERHRKLREYV-RTHDVQAWANSFLDD  458 (460)
T ss_pred             HHHHHHHHHH-HhCCHHHHHHHHHHh
Confidence            8888888887 569999999988753

It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.

>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=99.97  E-value=8.9e-29  Score=219.93  Aligned_cols=305  Identities=32%  Similarity=0.376  Sum_probs=235.0

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccchh------hh--------ccccccceeeeeccchh
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLD------YV--------KHLPLVAGAMIDSHVTA  121 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~------~~--------~~~~~~~~~~~~s~~~~  121 (377)
                      .+.|.|++....++.++...+..  |..++.++++.|.....++++.      +.        ......+++++.+..++
T Consensus       144 ~~~d~~i~d~~~~~~~l~~~~~~--p~~~~~i~~~~h~~~~lla~r~g~~~~l~~~~l~~~e~e~~~~~~~~~~ns~~~~  221 (495)
T KOG0853|consen  144 EKVDPIIEDFVSACVPLLKQLSG--PDVIIKIYFYCHFPDSLLAKRLGVLKVLYRHALDKIEEETTGLAWKILVNSYFTK  221 (495)
T ss_pred             hhhceeecchHHHHHHHHHHhcC--CcccceeEEeccchHHHhccccCccceeehhhhhhhhhhhhhccceEecchhhhh
Confidence            67899999888777777777665  7788899999999876665542      11        11236788999999998


Q ss_pred             hHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHH
Q 017085          122 EYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYE  201 (377)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~  201 (377)
                      ..+...+.   .+...++.+.+.++|.+.+.+.. .....+.+...|...+....+..+..+.++.|.||++.+++++..
T Consensus       222 ~~f~~~~~---~L~~~d~~~~y~ei~~s~~~~~~-~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd~~l~l~a~~~  297 (495)
T KOG0853|consen  222 RQFKATFV---SLSNSDITSTYPEIDGSWFTYGQ-YESHLELRLPVRLYRGVSGIDRFFPSINRFEPGKDQDLALPAFTL  297 (495)
T ss_pred             hhhhhhhh---hcCCCCcceeeccccchhccccc-cccchhcccccceeeeecccceEeeeeeecCCCCCceeehhhHHh
Confidence            88877644   24445588899899877665311 111223345556667777778888899999999999999999998


Q ss_pred             HHHHHhhhcccCCCeEEEEEecC-----CCcccHHHHHHHHHHHhcCC-CCcEEEecCcCCHHHHHHhcC--EEEecCCC
Q 017085          202 SLELIKEKKLEVPSVHAVIIGSD-----MNAQTKFESELRNYVMQKKI-QDRVHFVNKTLTVAPYLAAID--VLVQNSQA  273 (377)
Q Consensus       202 l~~~l~~~~~~~~~~~l~i~G~~-----~~~~~~~~~~l~~~~~~~~~-~~~v~~~g~~~~~~~~~~~ad--v~l~ps~~  273 (377)
                      +...+.+.  ..++.++.++|+.     ...+-.+.+++.++++++++ .+.+.|+....+...|...+|  +.+..-. 
T Consensus       298 ~~~~i~~~--~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa-  374 (495)
T KOG0853|consen  298 LHDSIPEP--SISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAKYRLAADTKGVLYQPA-  374 (495)
T ss_pred             hhcccCCC--CCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHHHHHHHhcceEEecCC-
Confidence            87755442  3467888899843     22333578899999999988 467777777655555555555  4444333 


Q ss_pred             CCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcC
Q 017085          274 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQ  353 (377)
Q Consensus       274 ~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~  353 (377)
                       .|.||++++|||+||+|||+++.||..|++.++.+|++++++......+++++.++..|++++.+|++++++++.+.|+
T Consensus       375 -~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp~~e~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~fs  453 (495)
T KOG0853|consen  375 -NEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDPGQEAVAELADALLKLRRDPELWARMGKNGLKRVKEMFS  453 (495)
T ss_pred             -CCCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh
Confidence             6999999999999999999999999999999999999999964222379999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 017085          354 EHHMAERIAVVLKEVLK  370 (377)
Q Consensus       354 ~~~~~~~~~~~~~~~~~  370 (377)
                      |..+.+++.++..+...
T Consensus       454 ~~~~~~ri~~~~~~~~~  470 (495)
T KOG0853|consen  454 WQHYSERIASVLGKYLQ  470 (495)
T ss_pred             HHHHHHHHHHHhHhcCC
Confidence            99999999998876543

>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis

Probab=99.97  E-value=4.2e-28  Score=220.05  Aligned_cols=303  Identities=17%  Similarity=0.154  Sum_probs=200.3

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeeccccc--c------------------------h---hhhcc
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYF--K------------------------L---DYVKH  106 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~--~------------------------~---~~~~~  106 (377)
                      .++|++|+|.-.++..+..+.....   ..+.|+|.|.......  .                        .   .-+..
T Consensus       147 ~~~dViH~HeWm~g~a~~~lK~~~~---~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~a  223 (590)
T cd03793         147 EPAVVAHFHEWQAGVGLPLLRKRKV---DVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAA  223 (590)
T ss_pred             CCCeEEEEcchhHhHHHHHHHHhCC---CCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHH
Confidence            5799999998665544444332222   2479999996542211  0                        0   01123


Q ss_pred             ccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhh----hh-----hhhHHHHHHHhCCCCCC
Q 017085          107 LPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNV----AK-----RVLREHVRESLGVRNED  177 (377)
Q Consensus       107 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~----~~-----~~~~~~~r~~~~~~~~~  177 (377)
                      ...+|.++++|+.++.....    .++.++++  |+|||+|...|.......    ..     ...+..++..+++++++
T Consensus       224 a~~Ad~fttVS~it~~E~~~----Ll~~~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~  297 (590)
T cd03793         224 AHCAHVFTTVSEITAYEAEH----LLKRKPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDK  297 (590)
T ss_pred             HhhCCEEEECChHHHHHHHH----HhCCCCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCC
Confidence            35779999999999888776    66777775  999999999886543110    00     01133457778888777


Q ss_pred             eEEEE-eccccc-cchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCc-------ccHHHHHHHH-----------
Q 017085          178 LLFAI-INSVSR-GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA-------QTKFESELRN-----------  237 (377)
Q Consensus       178 ~~i~~-~G~~~~-~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~-------~~~~~~~l~~-----------  237 (377)
                      ++++| +||+.. +||+|.+|+|+.+|...++..+.+..=+-|+++-.....       ..+..+++++           
T Consensus       298 tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~  377 (590)
T cd03793         298 TLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGK  377 (590)
T ss_pred             eEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhh
Confidence            77777 799988 999999999999999888875311112334444332110       0011111111           


Q ss_pred             --------------------------------------------------------HHHhcCCC----C--cEEEecC--
Q 017085          238 --------------------------------------------------------YVMQKKIQ----D--RVHFVNK--  253 (377)
Q Consensus       238 --------------------------------------------------------~~~~~~~~----~--~v~~~g~--  253 (377)
                                                                              .+++.++-    +  +|+|.+.  
T Consensus       378 ~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L  457 (590)
T cd03793         378 RLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFL  457 (590)
T ss_pred             hhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEccccc
Confidence                                                                    12222221    1  2555542  


Q ss_pred             -----c--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCc----ccceecC-cceeeecCCC----
Q 017085          254 -----T--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGT----TEIVVNG-TTGLLHPVGK----  317 (377)
Q Consensus       254 -----~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~----~e~~~~~-~~g~~~~~~~----  317 (377)
                           .  .+..++|+.||++|+||+  +||||++++|||+||+|||+|+.+|+    .|++.++ ..|+.+.+.+    
T Consensus       458 ~~~~~~~g~~y~E~~~g~dl~v~PS~--yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~  535 (590)
T cd03793         458 SSTNPLLGLDYEEFVRGCHLGVFPSY--YEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSP  535 (590)
T ss_pred             CCCCCcCCcchHHHhhhceEEEeccc--cCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCccch
Confidence                 1  457899999999999999  99999999999999999999999988    5555443 3566665211    


Q ss_pred             -CChhHHHHHHHHHhhCHHHHHHHHHHHH-HHHHHhcCHHHHHHHHHHHHHHHHh
Q 017085          318 -EGITPLAKNIVKLATHVERRLTMGKRGY-ERVKEIFQEHHMAERIAVVLKEVLK  370 (377)
Q Consensus       318 -~~~~~la~~i~~l~~~~~~~~~~~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~  370 (377)
                       +++++++++|.++++. +.++.+..+++ +...++|+|++.++.|.+.|..++.
T Consensus       536 ~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~  589 (590)
T cd03793         536 DESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS  589 (590)
T ss_pred             HHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence             1378899999998854 44555555443 3455789999999999999998775

GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

Probab=99.97  E-value=4e-28  Score=219.41  Aligned_cols=304  Identities=14%  Similarity=0.070  Sum_probs=210.2

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEcc------------------------chhHHHhhhc
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK------------------------GQETINTALK   57 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~   57 (377)
                      +|++.|.++||||++++...+...        ......|+++....                        ....++++.+
T Consensus        20 ~la~~L~~~g~ev~vv~~~~~~~~--------~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ik~~~   91 (357)
T PRK00726         20 ALAEELKKRGWEVLYLGTARGMEA--------RLVPKAGIEFHFIPSGGLRRKGSLANLKAPFKLLKGVLQARKILKRFK   91 (357)
T ss_pred             HHHHHHHhCCCEEEEEECCCchhh--------hccccCCCcEEEEeccCcCCCChHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            689999999999999987542111        11111243332211                        1234456788


Q ss_pred             ccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCC
Q 017085           58 ADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMP  137 (377)
Q Consensus        58 ~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  137 (377)
                      ||+||+|+.........+.+. .   ..|++++.|+....   ...+..++.+|.+++.+...   +.     .  .+..
T Consensus        92 pDvv~~~~~~~~~~~~~~~~~-~---~~p~v~~~~~~~~~---~~~r~~~~~~d~ii~~~~~~---~~-----~--~~~~  154 (357)
T PRK00726         92 PDVVVGFGGYVSGPGGLAARL-L---GIPLVIHEQNAVPG---LANKLLARFAKKVATAFPGA---FP-----E--FFKP  154 (357)
T ss_pred             CCEEEECCCcchhHHHHHHHH-c---CCCEEEEcCCCCcc---HHHHHHHHHhchheECchhh---hh-----c--cCCC
Confidence            999999985544332222221 1   24677666643221   12222346778888776632   11     1  4668


Q ss_pred             CeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHH-HHHHHHHHHHhhhcccCCCe
Q 017085          138 DTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFL-HSFYESLELIKEKKLEVPSV  216 (377)
Q Consensus       138 ~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll-~a~~~l~~~l~~~~~~~~~~  216 (377)
                      ++.+++||++.+.+....           .+++++++++.++++++|+..+.|+...++ +++.++.+       . + .
T Consensus       155 ~i~vi~n~v~~~~~~~~~-----------~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~~-------~-~-~  214 (357)
T PRK00726        155 KAVVTGNPVREEILALAA-----------PPARLAGREGKPTLLVVGGSQGARVLNEAVPEALALLPE-------A-L-Q  214 (357)
T ss_pred             CEEEECCCCChHhhcccc-----------hhhhccCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhh-------C-c-E
Confidence            999999999987653211           123567767778888899888888876555 88876532       1 2 5


Q ss_pred             EEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC
Q 017085          217 HAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA  296 (377)
Q Consensus       217 ~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~  296 (377)
                      .++++|++.      .+.+.+..+ +++.  |.+.|+++++.++|+.||+++.+|-      +++++|||++|+|+|++.
T Consensus       215 ~~~~~G~g~------~~~~~~~~~-~~~~--v~~~g~~~~~~~~~~~~d~~i~~~g------~~~~~Ea~~~g~Pvv~~~  279 (357)
T PRK00726        215 VIHQTGKGD------LEEVRAAYA-AGIN--AEVVPFIDDMAAAYAAADLVICRAG------ASTVAELAAAGLPAILVP  279 (357)
T ss_pred             EEEEcCCCc------HHHHHHHhh-cCCc--EEEeehHhhHHHHHHhCCEEEECCC------HHHHHHHHHhCCCEEEec
Confidence            677889983      345555555 6664  9999999999999999999997652      689999999999999987


Q ss_pred             CCC--------cccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 017085          297 AGG--------TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK  366 (377)
Q Consensus       297 ~~~--------~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  366 (377)
                      .++        ..+.+.+.++|+++++.|.++++++++|.++++|++.+++|++++++.. +.++.+.+++.+.++.+
T Consensus       280 ~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  356 (357)
T PRK00726        280 LPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEAARALG-KPDAAERLADLIEELAR  356 (357)
T ss_pred             CCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcC-CcCHHHHHHHHHHHHhh
Confidence            642        2355667789999987654589999999999999999999999999875 66999999988887754

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

Probab=99.96  E-value=9.4e-28  Score=216.68  Aligned_cols=297  Identities=15%  Similarity=0.107  Sum_probs=203.0

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEE--Ec----------------------cchhHHHhhhc
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI--SA----------------------KGQETINTALK   57 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----------------------~~~~~~~~~~~   57 (377)
                      +|++.|.++||||+++|........        .....|+++.  +.                      .....++++.+
T Consensus        18 ~la~~l~~~G~ev~v~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~   89 (350)
T cd03785          18 ALAEELRERGAEVLFLGTKRGLEAR--------LVPKAGIPLHTIPVGGLRRKGSLKKLKAPFKLLKGVLQARKILKKFK   89 (350)
T ss_pred             HHHHHHHhCCCEEEEEECCCcchhh--------cccccCCceEEEEecCcCCCChHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            6899999999999999875432111        0111222221  11                      11234456789


Q ss_pred             ccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCC
Q 017085           58 ADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMP  137 (377)
Q Consensus        58 ~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  137 (377)
                      ||+||+|+..++.....+....    ..|++.+.|....   ..........+|.+++.+....++          .+..
T Consensus        90 pDvI~~~~~~~~~~~~~~a~~~----~~p~v~~~~~~~~---~~~~~~~~~~~~~vi~~s~~~~~~----------~~~~  152 (350)
T cd03785          90 PDVVVGFGGYVSGPVGLAAKLL----GIPLVIHEQNAVP---GLANRLLARFADRVALSFPETAKY----------FPKD  152 (350)
T ss_pred             CCEEEECCCCcchHHHHHHHHh----CCCEEEEcCCCCc---cHHHHHHHHhhCEEEEcchhhhhc----------CCCC
Confidence            9999999865443322222111    1355555554322   111222345689999988877654          2457


Q ss_pred             CeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHH-HHHHHHHHHHHHhhhcccCCCe
Q 017085          138 DTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEKKLEVPSV  216 (377)
Q Consensus       138 ~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~-ll~a~~~l~~~l~~~~~~~~~~  216 (377)
                      ++.+++||++.+.+...+          . ++.++++++.++++++|+....|+... +++++..+.+         +++
T Consensus       153 ~~~~i~n~v~~~~~~~~~----------~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~---------~~~  212 (350)
T cd03785         153 KAVVTGNPVREEILALDR----------E-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLR---------KRL  212 (350)
T ss_pred             cEEEECCCCchHHhhhhh----------h-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc---------cCe
Confidence            899999999987664321          1 677888888888888887766777655 4577765532         456


Q ss_pred             EE-EEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe
Q 017085          217 HA-VIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT  295 (377)
Q Consensus       217 ~l-~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s  295 (377)
                      .+ +++|++      ..+++++.++++  .++|++.|+++++.++|+.||+++.+|-      +++++|||++|+|||++
T Consensus       213 ~~~~i~G~g------~~~~l~~~~~~~--~~~v~~~g~~~~~~~~l~~ad~~v~~sg------~~t~~Eam~~G~Pvv~~  278 (350)
T cd03785         213 QVIHQTGKG------DLEEVKKAYEEL--GVNYEVFPFIDDMAAAYAAADLVISRAG------ASTVAELAALGLPAILI  278 (350)
T ss_pred             EEEEEcCCc------cHHHHHHHHhcc--CCCeEEeehhhhHHHHHHhcCEEEECCC------HhHHHHHHHhCCCEEEe
Confidence            64 467776      346677777665  4689999999999999999999997552      68899999999999998


Q ss_pred             CCCC--------cccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHH
Q 017085          296 AAGG--------TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMA  358 (377)
Q Consensus       296 ~~~~--------~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~  358 (377)
                      +.++        ..+.+.++++|++++.++.|+++++++|..+++|++.+++|+.++++.+ +.+..++++
T Consensus       279 ~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~i~  348 (350)
T cd03785         279 PLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAARSLA-RPDAAERIA  348 (350)
T ss_pred             ecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-CCCHHHHHH
Confidence            7543        2456666779999997621299999999999999999999999998865 346666655

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PLN02605 monogalactosyldiacylglycerol synthase

Probab=99.96  E-value=1.2e-27  Score=217.35  Aligned_cols=275  Identities=13%  Similarity=0.070  Sum_probs=195.0

Q ss_pred             hhHHHhhhcccEEEEcCchh----hhHHHHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHh
Q 017085           49 QETINTALKADLIVLNTAVA----GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYW  124 (377)
Q Consensus        49 ~~~~~~~~~~Div~~~~~~~----~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~  124 (377)
                      +..++++.+||+||++++..    ..++..+....  ....|++.+++++.    .....+..+.+|.+++.|+...+.+
T Consensus        92 l~~~i~~~~pDvIi~thp~~~~~~~~~l~~~~~~~--~~~~p~~~~~tD~~----~~~~~w~~~~~d~~~~~s~~~~~~l  165 (382)
T PLN02605         92 VAKGLMKYKPDIIVSVHPLMQHVPLRVLRWQGKEL--GKKIPFTTVVTDLG----TCHPTWFHKGVTRCFCPSEEVAKRA  165 (382)
T ss_pred             HHHHHHhcCcCEEEEeCcCcccCHHHHHHHHhhcc--CCCCCEEEEECCCC----CcCcccccCCCCEEEECCHHHHHHH
Confidence            44567778999999988762    22222221111  12246666666552    1223444578999999998887776


Q ss_pred             hhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHH
Q 017085          125 KNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLE  204 (377)
Q Consensus       125 ~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~  204 (377)
                      .     ..|++++++.+++++++.+++....       .+..+|+++|++++.++++++|+....|++..+++++..+..
T Consensus       166 ~-----~~g~~~~ki~v~g~~v~~~f~~~~~-------~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~  233 (382)
T PLN02605        166 L-----KRGLEPSQIRVYGLPIRPSFARAVR-------PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLY  233 (382)
T ss_pred             H-----HcCCCHHHEEEECcccCHhhccCCC-------CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhc
Confidence            5     5578889999999999876543221       245689999999999999999999889999999998875421


Q ss_pred             HHhhhcccCCCeE-EEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHH
Q 017085          205 LIKEKKLEVPSVH-AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITI  283 (377)
Q Consensus       205 ~l~~~~~~~~~~~-l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~  283 (377)
                      ..+.   ..++.+ ++++|.+.    ...+++++.    ....+|+|+|+++++.++|++||+++.++      .|++++
T Consensus       234 ~~~~---~~~~~~~~vi~G~~~----~~~~~L~~~----~~~~~v~~~G~~~~~~~l~~aaDv~V~~~------g~~ti~  296 (382)
T PLN02605        234 DKNL---GKPIGQVVVICGRNK----KLQSKLESR----DWKIPVKVRGFVTNMEEWMGACDCIITKA------GPGTIA  296 (382)
T ss_pred             cccc---cCCCceEEEEECCCH----HHHHHHHhh----cccCCeEEEeccccHHHHHHhCCEEEECC------CcchHH
Confidence            0000   124565 56777662    234445443    22357999999999999999999999754      378999


Q ss_pred             HHHHcCCcEEEeCC------CCcccceecCcceeeecCCCCChhHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHhcCHHH
Q 017085          284 EAMAFQLPVLGTAA------GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH-VERRLTMGKRGYERVKEIFQEHH  356 (377)
Q Consensus       284 Ea~a~g~PvI~s~~------~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~-~~~~~~~~~~~~~~~~~~f~~~~  356 (377)
                      |||+||+|+|+++.      ++. +.+.+++.|+.+  .+  +++++++|.+++++ ++.+++|++++++.. ...+.+.
T Consensus       297 EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g~g~~~--~~--~~~la~~i~~ll~~~~~~~~~m~~~~~~~~-~~~a~~~  370 (382)
T PLN02605        297 EALIRGLPIILNGYIPGQEEGNV-PYVVDNGFGAFS--ES--PKEIARIVAEWFGDKSDELEAMSENALKLA-RPEAVFD  370 (382)
T ss_pred             HHHHcCCCEEEecCCCccchhhH-HHHHhCCceeec--CC--HHHHHHHHHHHHcCCHHHHHHHHHHHHHhc-CCchHHH
Confidence            99999999999984      333 334455577664  45  99999999999998 999999999998865 4466777


Q ss_pred             HHHHHHHH
Q 017085          357 MAERIAVV  364 (377)
Q Consensus       357 ~~~~~~~~  364 (377)
                      +++.+.+.
T Consensus       371 i~~~l~~~  378 (382)
T PLN02605        371 IVHDLHEL  378 (382)
T ss_pred             HHHHHHHH
Confidence            77666554

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

Probab=99.96  E-value=1.9e-27  Score=214.47  Aligned_cols=295  Identities=14%  Similarity=0.104  Sum_probs=196.8

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEc------------------------cchhHHHhhhc
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA------------------------KGQETINTALK   57 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~   57 (377)
                      +|+++|.++||||++++...... .       ......|+++...                        .....++++.+
T Consensus        19 ~La~~L~~~g~eV~vv~~~~~~~-~-------~~~~~~g~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~i~~~~   90 (348)
T TIGR01133        19 AVAEELIKRGVEVLWLGTKRGLE-K-------RLVPKAGIEFYFIPVGGLRRKGSFRLIKTPLKLLKAVFQARRILKKFK   90 (348)
T ss_pred             HHHHHHHhCCCEEEEEeCCCcch-h-------cccccCCCceEEEeccCcCCCChHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            68999999999999998543211 0       0011123333211                        12334557789


Q ss_pred             ccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCC
Q 017085           58 ADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMP  137 (377)
Q Consensus        58 ~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  137 (377)
                      ||+||+|...+..+...+... .   ..|++.+.+...   .........+.+|.+++.++...+++             
T Consensus        91 pDvVi~~~~~~~~~~~~~~~~-~---~~p~v~~~~~~~---~~~~~~~~~~~~d~ii~~~~~~~~~~-------------  150 (348)
T TIGR01133        91 PDAVIGFGGYVSGPAGLAAKL-L---GIPLFHHEQNAV---PGLTNKLLSRFAKKVLISFPGAKDHF-------------  150 (348)
T ss_pred             CCEEEEcCCcccHHHHHHHHH-c---CCCEEEECCCCC---ccHHHHHHHHHhCeeEECchhHhhcC-------------
Confidence            999999976654333222211 1   124444333221   12222334567899999998776543             


Q ss_pred             CeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHH-HHHHHHHHHHHHhhhcccCCCe
Q 017085          138 DTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEKKLEVPSV  216 (377)
Q Consensus       138 ~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~-ll~a~~~l~~~l~~~~~~~~~~  216 (377)
                      +..+++||++...+.+..           .++.++++++.++++++|+....|+... ++++++.+.+         .++
T Consensus       151 ~~~~i~n~v~~~~~~~~~-----------~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~---------~~~  210 (348)
T TIGR01133       151 EAVLVGNPVRQEIRSLPV-----------PRERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAE---------KGI  210 (348)
T ss_pred             CceEEcCCcCHHHhcccc-----------hhhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhh---------cCc
Confidence            237999999876553211           1235678788889999988777888655 4577765532         345


Q ss_pred             EEEE-EecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe
Q 017085          217 HAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT  295 (377)
Q Consensus       217 ~l~i-~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s  295 (377)
                      ++++ +|++      ..+.+++.++++++.+.+.|. .. ++.++|+.||+++.+|     | |++++|||++|+|+|++
T Consensus       211 ~~~~~~g~~------~~~~l~~~~~~~~l~~~v~~~-~~-~~~~~l~~ad~~v~~~-----g-~~~l~Ea~~~g~Pvv~~  276 (348)
T TIGR01133       211 QIVHQTGKN------DLEKVKNVYQELGIEAIVTFI-DE-NMAAAYAAADLVISRA-----G-ASTVAELAAAGVPAILI  276 (348)
T ss_pred             EEEEECCcc------hHHHHHHHHhhCCceEEecCc-cc-CHHHHHHhCCEEEECC-----C-hhHHHHHHHcCCCEEEe
Confidence            6644 4444      236788888888876556666 33 8999999999999754     2 78999999999999999


Q ss_pred             CCCC-------cccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHH
Q 017085          296 AAGG-------TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAE  359 (377)
Q Consensus       296 ~~~~-------~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~  359 (377)
                      +.++       ..+++.++++|++++++|.++++++++|.++++|++.+.+|++++++++ +....+++++
T Consensus       277 ~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~i~~  346 (348)
T TIGR01133       277 PYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARKLA-KPDAAKRIAE  346 (348)
T ss_pred             eCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcC-CccHHHHHHh
Confidence            8654       2357778889999987644499999999999999999999999998755 3345555443

RL J Bacteriol 1993 Mar;175(6):1841-3

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.96  E-value=1.2e-27  Score=193.45  Aligned_cols=169  Identities=29%  Similarity=0.497  Sum_probs=152.1

Q ss_pred             HHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcC
Q 017085          164 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK  243 (377)
Q Consensus       164 ~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~  243 (377)
                      ++..+...+.+.++++|+++|++.+.||++.+++++..+.+..      .+++.++|+|.+     ++...+...++.++
T Consensus         2 ~~~~~~~~~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~------~~~~~l~i~G~~-----~~~~~~~~~~~~~~   70 (172)
T PF00534_consen    2 KDKLREKLKIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKK------NPNYKLVIVGDG-----EYKKELKNLIEKLN   70 (172)
T ss_dssp             HHHHHHHTTT-TTSEEEEEESESSGGGTHHHHHHHHHHHHHHH------HTTEEEEEESHC-----CHHHHHHHHHHHTT
T ss_pred             hHHHHHHcCCCCCCeEEEEEecCccccCHHHHHHHHHHHHhhc------CCCeEEEEEccc-----cccccccccccccc
Confidence            5677888889899999999999999999999999999876431      278999999966     47788999999999


Q ss_pred             CCCcEEEecCcC--CHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChh
Q 017085          244 IQDRVHFVNKTL--TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGIT  321 (377)
Q Consensus       244 ~~~~v~~~g~~~--~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~  321 (377)
                      +.++++|+|...  ++.++|+.||++++||.  .|++|++++|||++|+|||+++.++..+++.++.+|+++++.+  ++
T Consensus        71 ~~~~i~~~~~~~~~~l~~~~~~~di~v~~s~--~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~--~~  146 (172)
T PF00534_consen   71 LKENIIFLGYVPDDELDELYKSSDIFVSPSR--NEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPND--IE  146 (172)
T ss_dssp             CGTTEEEEESHSHHHHHHHHHHTSEEEE-BS--SBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTS--HH
T ss_pred             ccccccccccccccccccccccceecccccc--ccccccccccccccccceeeccccCCceeeccccceEEeCCCC--HH
Confidence            999999999985  89999999999999999  8999999999999999999999999999999999999999988  99


Q ss_pred             HHHHHHHHHhhCHHHHHHHHHHHHHH
Q 017085          322 PLAKNIVKLATHVERRLTMGKRGYER  347 (377)
Q Consensus       322 ~la~~i~~l~~~~~~~~~~~~~~~~~  347 (377)
                      +++++|.+++++++.+..|+++++++
T Consensus       147 ~l~~~i~~~l~~~~~~~~l~~~~~~~  172 (172)
T PF00534_consen  147 ELADAIEKLLNDPELRQKLGKNARER  172 (172)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCHHHHHHHHHHhcCC
Confidence            99999999999999999999999874

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....

>PRK13609 diacylglycerol glucosyltransferase; Provisional

Probab=99.95  E-value=2.2e-26  Score=209.65  Aligned_cols=272  Identities=10%  Similarity=0.044  Sum_probs=193.6

Q ss_pred             chhHHHhhhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhh
Q 017085           48 GQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNR  127 (377)
Q Consensus        48 ~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~  127 (377)
                      ....++++.+||+||++++......  +....  ....|++...++..     ....+..+.+|.+++.|+...+.+.  
T Consensus        95 ~l~~~l~~~~pD~Vi~~~~~~~~~~--~~~~~--~~~ip~~~~~td~~-----~~~~~~~~~ad~i~~~s~~~~~~l~--  163 (380)
T PRK13609         95 RLKLLLQAEKPDIVINTFPIIAVPE--LKKQT--GISIPTYNVLTDFC-----LHKIWVHREVDRYFVATDHVKKVLV--  163 (380)
T ss_pred             HHHHHHHHhCcCEEEEcChHHHHHH--HHHhc--CCCCCeEEEeCCCC-----CCcccccCCCCEEEECCHHHHHHHH--
Confidence            4456667899999999877644222  22111  11245554444321     2223445789999999998887776  


Q ss_pred             hhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCC-eEEEEeccccccchhHHHHHHHHHHHHHH
Q 017085          128 TRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNED-LLFAIINSVSRGKGQDLFLHSFYESLELI  206 (377)
Q Consensus       128 ~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l  206 (377)
                         +.|++.+++.+++++++..+....        .+...+++++++++. +++++.|++...|+++.+++++.+     
T Consensus       164 ---~~gi~~~ki~v~G~p~~~~f~~~~--------~~~~~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~-----  227 (380)
T PRK13609        164 ---DIGVPPEQVVETGIPIRSSFELKI--------NPDIIYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLMS-----  227 (380)
T ss_pred             ---HcCCChhHEEEECcccChHHcCcC--------CHHHHHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhh-----
Confidence               457788888888777654332111        123578889998665 456667888888999988887652     


Q ss_pred             hhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHH
Q 017085          207 KEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAM  286 (377)
Q Consensus       207 ~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~  286 (377)
                            .++++++++|++.+   +..+.+++.+++.+  ++|+|+|+++++.++|+.||+++.      ++.|++++|||
T Consensus       228 ------~~~~~~viv~G~~~---~~~~~l~~~~~~~~--~~v~~~g~~~~~~~l~~~aD~~v~------~~gg~t~~EA~  290 (380)
T PRK13609        228 ------VPDLQVVVVCGKNE---ALKQSLEDLQETNP--DALKVFGYVENIDELFRVTSCMIT------KPGGITLSEAA  290 (380)
T ss_pred             ------CCCcEEEEEeCCCH---HHHHHHHHHHhcCC--CcEEEEechhhHHHHHHhccEEEe------CCCchHHHHHH
Confidence                  16789887754211   35677887777665  689999999999999999999884      23488999999


Q ss_pred             HcCCcEEEeC-CCCcc----cceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 017085          287 AFQLPVLGTA-AGGTT----EIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERI  361 (377)
Q Consensus       287 a~g~PvI~s~-~~~~~----e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~  361 (377)
                      ++|+|||+++ .+|..    +++.  ++|+.+...+  +++++++|.++++|++.+.+|++++++.. +.++++.+++.+
T Consensus       291 a~g~PvI~~~~~~g~~~~n~~~~~--~~G~~~~~~~--~~~l~~~i~~ll~~~~~~~~m~~~~~~~~-~~~s~~~i~~~i  365 (380)
T PRK13609        291 ALGVPVILYKPVPGQEKENAMYFE--RKGAAVVIRD--DEEVFAKTEALLQDDMKLLQMKEAMKSLY-LPEPADHIVDDI  365 (380)
T ss_pred             HhCCCEEECCCCCCcchHHHHHHH--hCCcEEEECC--HHHHHHHHHHHHCCHHHHHHHHHHHHHhC-CCchHHHHHHHH
Confidence            9999999986 45421    2332  2455555556  99999999999999999999999998755 558999999999


Q ss_pred             HHHHHHH
Q 017085          362 AVVLKEV  368 (377)
Q Consensus       362 ~~~~~~~  368 (377)
                      .+.+...
T Consensus       366 ~~~~~~~  372 (380)
T PRK13609        366 LAENHVE  372 (380)
T ss_pred             HHhhhhh
Confidence            9887653

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.95  E-value=7.2e-26  Score=219.64  Aligned_cols=293  Identities=16%  Similarity=0.161  Sum_probs=209.5

Q ss_pred             ccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc-------cchhhhccccccceeeeeccchhhHhhhhhhh
Q 017085           58 ADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRE  130 (377)
Q Consensus        58 ~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~-------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  130 (377)
                      -|+|++|+.... .+...++...+.  .++.+.+|-.++.+       ......+-+-.+|.|-..+...+..|.+...+
T Consensus       148 ~d~vWvhDYhL~-llp~~lR~~~~~--~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r  224 (797)
T PLN03063        148 GDVVWCHDYHLM-FLPQYLKEYNNK--MKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTR  224 (797)
T ss_pred             CCEEEEecchhh-hHHHHHHHhCCC--CcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHH
Confidence            489999985433 233334434444  37888888765432       11223333456777888777777766665444


Q ss_pred             hhhcc-----------CCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHH
Q 017085          131 RLRIK-----------MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSF  199 (377)
Q Consensus       131 ~~~~~-----------~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~  199 (377)
                      -++..           ..++.++|||||++.|.........+.....+++.++   ++.+|+++||+++.||++.+++|+
T Consensus       225 ~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~lIl~VgRLd~~KGi~~lL~Af  301 (797)
T PLN03063        225 ILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFA---GRKVILGVDRLDMIKGIPQKYLAF  301 (797)
T ss_pred             HhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcC---CCeEEEEecccccccCHHHHHHHH
Confidence            44332           2468899999999988654332221222234555553   567889999999999999999999


Q ss_pred             HHHHHHHhhhcccCCCe----EEEEEecCCCcccHHHHHHHHHHHhcC--CCCc--------EEEec-Cc--CCHHHHHH
Q 017085          200 YESLELIKEKKLEVPSV----HAVIIGSDMNAQTKFESELRNYVMQKK--IQDR--------VHFVN-KT--LTVAPYLA  262 (377)
Q Consensus       200 ~~l~~~l~~~~~~~~~~----~l~i~G~~~~~~~~~~~~l~~~~~~~~--~~~~--------v~~~g-~~--~~~~~~~~  262 (377)
                      +.+++       ++|++    .|+.++.....+.+.++++++.++++.  +..+        |++++ ..  +++.++|+
T Consensus       302 e~lL~-------~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~  374 (797)
T PLN03063        302 EKFLE-------ENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYA  374 (797)
T ss_pred             HHHHH-------hCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHH
Confidence            98766       33554    455444322222245566777666653  2221        33333 22  78999999


Q ss_pred             hcCEEEecCCCCCCccchHHHHHHHcCCc----EEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhh-CHHHH
Q 017085          263 AIDVLVQNSQAWGECFGRITIEAMAFQLP----VLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERR  337 (377)
Q Consensus       263 ~adv~l~ps~~~~e~~~~~~~Ea~a~g~P----vI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~-~~~~~  337 (377)
                      .||++|+||.  .||||++++||||||+|    +|.|..+|..+.+  +..|+++++.|  ++++|++|.++++ +++++
T Consensus       375 ~ADvfvvtSl--rEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allVnP~D--~~~lA~AI~~aL~m~~~er  448 (797)
T PLN03063        375 ITDVMLVTSL--RDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLVNPWN--ITEVSSAIKEALNMSDEER  448 (797)
T ss_pred             hCCEEEeCcc--ccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEECCCC--HHHHHHHHHHHHhCCHHHH
Confidence            9999999999  99999999999999999    9999999988876  55799999998  9999999999999 88888


Q ss_pred             HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Q 017085          338 LTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK  370 (377)
Q Consensus       338 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  370 (377)
                      ++..+..++++. +++|..+++.+.+.++++..
T Consensus       449 ~~r~~~~~~~v~-~~~~~~Wa~~fl~~l~~~~~  480 (797)
T PLN03063        449 ETRHRHNFQYVK-THSAQKWADDFMSELNDIIV  480 (797)
T ss_pred             HHHHHHHHHhhh-hCCHHHHHHHHHHHHHHHhh
Confidence            888888888774 59999999999998887764

>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]

Probab=99.95  E-value=1.9e-25  Score=202.05  Aligned_cols=295  Identities=18%  Similarity=0.142  Sum_probs=222.5

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc-cc-------------------------hhhhccccc
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-FK-------------------------LDYVKHLPL  109 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~-~~-------------------------~~~~~~~~~  109 (377)
                      ..|||||+|+-.++.....+..........|.++|+|...... +.                         ...+..+..
T Consensus       129 ~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~  208 (487)
T COG0297         129 WLPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYY  208 (487)
T ss_pred             CCCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhhee
Confidence            3699999998665544333333221233468999999753211 10                         011223357


Q ss_pred             cceeeeeccchhhHhhhhhhhhhh--------ccCCCeEEEEcCChhhhHHHhhhhh-----------hhhhhHHHHHHH
Q 017085          110 VAGAMIDSHVTAEYWKNRTRERLR--------IKMPDTYVVHLGNSKELMEVAEDNV-----------AKRVLREHVRES  170 (377)
Q Consensus       110 ~~~~~~~s~~~~~~~~~~~~~~~~--------~~~~~~~vi~ngi~~~~~~~~~~~~-----------~~~~~~~~~r~~  170 (377)
                      +|.+.++|...+..+...   .+|        .-..++.-|-||+|.+.+.+.....           .+..++..+++.
T Consensus       209 ad~vttVSptYa~Ei~t~---~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~  285 (487)
T COG0297         209 ADAVTTVSPTYAGEIYTP---EYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQER  285 (487)
T ss_pred             ccEEEEECHHHHHhhccc---cccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHH
Confidence            889999999888766522   221        1236788999999998776654321           255667888999


Q ss_pred             hCCCC--CCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcE
Q 017085          171 LGVRN--EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRV  248 (377)
Q Consensus       171 ~~~~~--~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v  248 (377)
                      +|++.  +.+.+.++||+..+||+|.+++++..+.+         ..+++++.|.|.+   .+.+.+..+++.+.. ...
T Consensus       286 ~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~---------~~~~~vilG~gd~---~le~~~~~la~~~~~-~~~  352 (487)
T COG0297         286 LGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLE---------QGWQLVLLGTGDP---ELEEALRALASRHPG-RVL  352 (487)
T ss_pred             hCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHH---------hCceEEEEecCcH---HHHHHHHHHHHhcCc-eEE
Confidence            99983  55999999999999999999999999877         4599999999843   578888898888754 233


Q ss_pred             EEecCcCC-HHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceec--------CcceeeecCCCCC
Q 017085          249 HFVNKTLT-VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN--------GTTGLLHPVGKEG  319 (377)
Q Consensus       249 ~~~g~~~~-~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~--------~~~g~~~~~~~~~  319 (377)
                      ...|+.+. ...+++.||++++||+  +|+||++.++||.+|+++|+..+||+++.+.+        ..+|+++.+.+  
T Consensus       353 ~~i~~~~~la~~i~agaD~~lmPSr--fEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~--  428 (487)
T COG0297         353 VVIGYDEPLAHLIYAGADVILMPSR--FEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTN--  428 (487)
T ss_pred             EEeeecHHHHHHHHhcCCEEEeCCc--CcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCC--
Confidence            44455544 4578899999999999  99999999999999999999999999999985        47999999988  


Q ss_pred             hhHHHHHHHHHhh---CHHH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccc
Q 017085          320 ITPLAKNIVKLAT---HVER-RLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSK  373 (377)
Q Consensus       320 ~~~la~~i~~l~~---~~~~-~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~  373 (377)
                      +++++.+|.+.+.   ++.. .+.+..++..   ..|+|+..++++.++|+.+++...
T Consensus       429 ~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~~~~~~  483 (487)
T COG0297         429 PDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPLLSKPF  483 (487)
T ss_pred             HHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHHhcccc
Confidence            9999999998765   4443 6666666554   569999999999999999987653

>PRK13608 diacylglycerol glucosyltransferase; Provisional

Probab=99.94  E-value=6.4e-25  Score=199.84  Aligned_cols=275  Identities=12%  Similarity=0.089  Sum_probs=191.8

Q ss_pred             chhHHHhhhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhh
Q 017085           48 GQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNR  127 (377)
Q Consensus        48 ~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~  127 (377)
                      ....++++.+||+|+++++.+..  ..+.....  ...|++...++..     ....+..+.+|.+++.++...+.+.  
T Consensus        95 ~l~~~l~~~kPDvVi~~~p~~~~--~~l~~~~~--~~iP~~~v~td~~-----~~~~w~~~~~d~~~v~s~~~~~~l~--  163 (391)
T PRK13608         95 KLINLLIKEKPDLILLTFPTPVM--SVLTEQFN--INIPVATVMTDYR-----LHKNWITPYSTRYYVATKETKQDFI--  163 (391)
T ss_pred             HHHHHHHHhCcCEEEECCcHHHH--HHHHHhcC--CCCCEEEEeCCCC-----cccccccCCCCEEEECCHHHHHHHH--
Confidence            45566778999999998776432  22221111  1235554444431     1122345788999999998888776  


Q ss_pred             hhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCe-EEEEeccccccchhHHHHHHHHHHHHHH
Q 017085          128 TRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDL-LFAIINSVSRGKGQDLFLHSFYESLELI  206 (377)
Q Consensus       128 ~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~i~~~G~~~~~Kg~~~ll~a~~~l~~~l  206 (377)
                         ..|++.+++.+++++++..+....        .+...++.++++++.+ ++++.|++...||++.+++++.+     
T Consensus       164 ---~~gi~~~ki~v~GiPv~~~f~~~~--------~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~-----  227 (391)
T PRK13608        164 ---DVGIDPSTVKVTGIPIDNKFETPI--------DQKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILA-----  227 (391)
T ss_pred             ---HcCCCHHHEEEECeecChHhcccc--------cHHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHh-----
Confidence               447788899998888765442211        1345677899976654 55678999988999999997531     


Q ss_pred             hhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHH
Q 017085          207 KEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAM  286 (377)
Q Consensus       207 ~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~  286 (377)
                           ..+++++++++++..   ...+++++.   .+..++|+++|+++++.++|+.||+++..      +.|+++.|||
T Consensus       228 -----~~~~~~~vvv~G~~~---~l~~~l~~~---~~~~~~v~~~G~~~~~~~~~~~aDl~I~k------~gg~tl~EA~  290 (391)
T PRK13608        228 -----KSANAQVVMICGKSK---ELKRSLTAK---FKSNENVLILGYTKHMNEWMASSQLMITK------PGGITISEGL  290 (391)
T ss_pred             -----cCCCceEEEEcCCCH---HHHHHHHHH---hccCCCeEEEeccchHHHHHHhhhEEEeC------CchHHHHHHH
Confidence                 226788876644311   133444433   33446899999999999999999999952      3588999999


Q ss_pred             HcCCcEEEeC-CCC----cccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 017085          287 AFQLPVLGTA-AGG----TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERI  361 (377)
Q Consensus       287 a~g~PvI~s~-~~~----~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~  361 (377)
                      ++|+|+|+++ .++    ...++.+.+.|+..  .+  .++++++|.++++|++.+.+|++++++.. +.|+++.+++++
T Consensus       291 a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~~--~~~l~~~i~~ll~~~~~~~~m~~~~~~~~-~~~s~~~i~~~l  365 (391)
T PRK13608        291 ARCIPMIFLNPAPGQELENALYFEEKGFGKIA--DT--PEEAIKIVASLTNGNEQLTNMISTMEQDK-IKYATQTICRDL  365 (391)
T ss_pred             HhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--CC--HHHHHHHHHHHhcCHHHHHHHHHHHHHhc-CCCCHHHHHHHH
Confidence            9999999996 333    12233344455553  35  89999999999999999999999999865 459999999999


Q ss_pred             HHHHHHHHhc
Q 017085          362 AVVLKEVLKK  371 (377)
Q Consensus       362 ~~~~~~~~~~  371 (377)
                      .+++..+...
T Consensus       366 ~~l~~~~~~~  375 (391)
T PRK13608        366 LDLIGHSSQP  375 (391)
T ss_pred             HHHhhhhhhh
Confidence            9988765443

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=99.93  E-value=3.4e-24  Score=208.62  Aligned_cols=293  Identities=16%  Similarity=0.158  Sum_probs=201.0

Q ss_pred             cccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc-------cchhhhccccccceeeeeccchhhHhhhhhh
Q 017085           57 KADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTR  129 (377)
Q Consensus        57 ~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~-------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  129 (377)
                      .-|+|++|+...... ...++...+.  .++.+..|-.++..       +......-+-.+|.+-..+......|.+...
T Consensus       133 ~~d~vwvhDYhl~l~-p~~lr~~~~~--~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~  209 (726)
T PRK14501        133 PGDVVWVHDYQLMLL-PAMLRERLPD--ARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVL  209 (726)
T ss_pred             CCCEEEEeCchhhhH-HHHHHhhCCC--CcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHH
Confidence            349999998654332 2333333333  37888888765432       1122223334666677777666666555444


Q ss_pred             hhhhc-----------cCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHH
Q 017085          130 ERLRI-----------KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHS  198 (377)
Q Consensus       130 ~~~~~-----------~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a  198 (377)
                      +.++.           ...++.++|||||++.|.+.............+|+.+   .+.++|+++||+++.||+..+++|
T Consensus       210 ~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~~il~VgRl~~~Kgi~~~l~A  286 (726)
T PRK14501        210 RVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDL---RGRKIILSIDRLDYTKGIPRRLLA  286 (726)
T ss_pred             HHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHc---CCCEEEEEecCcccccCHHHHHHH
Confidence            43332           1235899999999999986543222222233455553   466789999999999999999999


Q ss_pred             HHHHHHHHhhhcccCC----CeEEEEEecCCCcc----cHHHHHHHHHHHhcC-------CCCcEEEecCc--CCHHHHH
Q 017085          199 FYESLELIKEKKLEVP----SVHAVIIGSDMNAQ----TKFESELRNYVMQKK-------IQDRVHFVNKT--LTVAPYL  261 (377)
Q Consensus       199 ~~~l~~~l~~~~~~~~----~~~l~i~G~~~~~~----~~~~~~l~~~~~~~~-------~~~~v~~~g~~--~~~~~~~  261 (377)
                      ++.+++       ++|    +++|+++|.+....    .++..++.+++.+.+       ....+.+.|..  +++..+|
T Consensus       287 ~~~ll~-------~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly  359 (726)
T PRK14501        287 FERFLE-------KNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALY  359 (726)
T ss_pred             HHHHHH-------hCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHH
Confidence            998765       334    47898887432211    123444444443322       11234455654  8899999


Q ss_pred             HhcCEEEecCCCCCCccchHHHHHHHcCC-----cEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhC-HH
Q 017085          262 AAIDVLVQNSQAWGECFGRITIEAMAFQL-----PVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH-VE  335 (377)
Q Consensus       262 ~~adv~l~ps~~~~e~~~~~~~Ea~a~g~-----PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~-~~  335 (377)
                      +.||++++||.  .||||++++|||+||+     ||++...|+..++.    .|+++++.|  ++++|++|.+++++ .+
T Consensus       360 ~~aDv~v~~S~--~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv~P~d--~~~la~ai~~~l~~~~~  431 (726)
T PRK14501        360 RAADVALVTPL--RDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLVNPND--IEGIAAAIKRALEMPEE  431 (726)
T ss_pred             HhccEEEeccc--ccccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEECCCC--HHHHHHHHHHHHcCCHH
Confidence            99999999999  9999999999999955     56666677777765    489999998  99999999999985 35


Q ss_pred             HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Q 017085          336 RRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKK  371 (377)
Q Consensus       336 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  371 (377)
                      .+.+...++++.+ .+|||+.+++++++.|.++...
T Consensus       432 e~~~r~~~~~~~v-~~~~~~~w~~~~l~~l~~~~~~  466 (726)
T PRK14501        432 EQRERMQAMQERL-RRYDVHKWASDFLDELREAAEK  466 (726)
T ss_pred             HHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHhh
Confidence            5666667788887 5799999999999999987543

>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.93  E-value=7e-25  Score=198.82  Aligned_cols=260  Identities=14%  Similarity=0.030  Sum_probs=172.5

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccc------hhhhccccccceeeeeccchhhHhhhhhh
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK------LDYVKHLPLVAGAMIDSHVTAEYWKNRTR  129 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  129 (377)
                      .+.++++.+.+....+...     .  ...++|++.++.......      ......++.+|.+++.|....+.+.+   
T Consensus       101 ~~~~i~~~~~P~~~~~~~~-----~--~~~~~Vyd~~D~~~~~~~~~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~---  170 (373)
T cd04950         101 FGRPILWYYTPYTLPVAAL-----L--QASLVVYDCVDDLSAFPGGPPELLEAERRLLKRADLVFTTSPSLYEAKRR---  170 (373)
T ss_pred             CCCcEEEEeCccHHHHHhh-----c--CCCeEEEEcccchhccCCCCHHHHHHHHHHHHhCCEEEECCHHHHHHHhh---
Confidence            3445666665554433332     1  124788888876543221      12345668899999999998876653   


Q ss_pred             hhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhh
Q 017085          130 ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEK  209 (377)
Q Consensus       130 ~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~  209 (377)
                        ++   .++.++|||+|.+.|.+......    .  .+..  ...++++++|+|++.+.++++.+.+++.         
T Consensus       171 --~~---~~i~~i~ngvd~~~f~~~~~~~~----~--~~~~--~~~~~~~i~y~G~l~~~~d~~ll~~la~---------  228 (373)
T cd04950         171 --LN---PNVVLVPNGVDYEHFAAARDPPP----P--PADL--AALPRPVIGYYGAIAEWLDLELLEALAK---------  228 (373)
T ss_pred             --CC---CCEEEcccccCHHHhhcccccCC----C--hhHH--hcCCCCEEEEEeccccccCHHHHHHHHH---------
Confidence              23   68999999999998865432110    0  0111  1246689999999999778766554433         


Q ss_pred             cccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCC---CCCccchHHHH
Q 017085          210 KLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQA---WGECFGRITIE  284 (377)
Q Consensus       210 ~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~---~~e~~~~~~~E  284 (377)
                        ..++++|+++|++....  ....       +...+||+|+|.+  +++..+++.+|++++|+..   ..+++|++++|
T Consensus       229 --~~p~~~~vliG~~~~~~--~~~~-------~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~E  297 (373)
T cd04950         229 --ARPDWSFVLIGPVDVSI--DPSA-------LLRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFE  297 (373)
T ss_pred             --HCCCCEEEEECCCcCcc--ChhH-------hccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHH
Confidence              22889999999972111  1111       1113689999987  7899999999999999863   13468999999


Q ss_pred             HHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 017085          285 AMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVV  364 (377)
Q Consensus       285 a~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~  364 (377)
                      |||||+|||+|+.+.+.+   ....+++ ..+|  +++++++|.+++.++......  .+++ +.+.|||+..++++.+.
T Consensus       298 ylA~G~PVVat~~~~~~~---~~~~~~~-~~~d--~~~~~~ai~~~l~~~~~~~~~--~~~~-~~~~~sW~~~a~~~~~~  368 (373)
T cd04950         298 YLAAGKPVVATPLPEVRR---YEDEVVL-IADD--PEEFVAAIEKALLEDGPARER--RRLR-LAAQNSWDARAAEMLEA  368 (373)
T ss_pred             HhccCCCEEecCcHHHHh---hcCcEEE-eCCC--HHHHHHHHHHHHhcCCchHHH--HHHH-HHHHCCHHHHHHHHHHH
Confidence            999999999998655443   3333444 4455  999999999976543211111  2222 45679999999999966


Q ss_pred             HHH
Q 017085          365 LKE  367 (377)
Q Consensus       365 ~~~  367 (377)
                      +.+
T Consensus       369 l~~  371 (373)
T cd04950         369 LQE  371 (373)
T ss_pred             HHh
Confidence            543

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase

Probab=99.92  E-value=5.3e-22  Score=180.72  Aligned_cols=292  Identities=13%  Similarity=0.091  Sum_probs=208.1

Q ss_pred             cccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc-------cchhhhccccccceeeeeccchhhHhhhhhh
Q 017085           57 KADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTR  129 (377)
Q Consensus        57 ~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~-------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  129 (377)
                      .-|+|++|+.-... +...++...+.  .++.+.+|-.++..       +.....+-+-.+|.+-..+...+..|.+...
T Consensus       132 ~~d~vWVhDYhL~l-lp~~LR~~~~~--~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~  208 (487)
T TIGR02398       132 EGATVWVHDYNLWL-VPGYIRQLRPD--LKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAAR  208 (487)
T ss_pred             CCCEEEEecchhhH-HHHHHHHhCCC--CeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHH
Confidence            34899999854332 33333333433  37888888655422       1222233334667777777777766666554


Q ss_pred             hhhhccC--------------------------------CCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCC
Q 017085          130 ERLRIKM--------------------------------PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNED  177 (377)
Q Consensus       130 ~~~~~~~--------------------------------~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  177 (377)
                      +.+|+..                                -++.++|.|||++.|...............+|++++   ++
T Consensus       209 r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~---~~  285 (487)
T TIGR02398       209 GLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELA---GV  285 (487)
T ss_pred             HHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcC---Cc
Confidence            4443211                                137899999999998765433333344566888887   57


Q ss_pred             eEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcc----cHHHHHHHHHHHhc-------CCCC
Q 017085          178 LLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ----TKFESELRNYVMQK-------KIQD  246 (377)
Q Consensus       178 ~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~----~~~~~~l~~~~~~~-------~~~~  246 (377)
                      .+|++++|++..||+...++|+.++++..++.   ..+++|+++|.+....    ..+..++++.+.+.       +..+
T Consensus       286 kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~---~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~p  362 (487)
T TIGR02398       286 KLILSAERVDYTKGILEKLNAYERLLERRPEL---LGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTP  362 (487)
T ss_pred             eEEEEecccccccCHHHHHHHHHHHHHhCccc---cCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCcc
Confidence            88999999999999999999999987632210   1247999888764322    23455566666554       5555


Q ss_pred             cEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCC----cEEEeCCCCcccceecCcceeeecCCCCCh
Q 017085          247 RVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQL----PVLGTAAGGTTEIVVNGTTGLLHPVGKEGI  320 (377)
Q Consensus       247 ~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~----PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~  320 (377)
                      .+.+.+..  +++..+|+.||+++.+|.  .||++++..|+++|+.    |+|.|..+|..+.+   ..+++++|.|  +
T Consensus       363 v~~~~~~v~~~el~alYr~ADV~lvT~l--rDGmNLVa~Eyva~~~~~~GvLILSefaGaa~~l---~~AllVNP~d--~  435 (487)
T TIGR02398       363 LQFFTRSLPYEEVSAWFAMADVMWITPL--RDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL---KGALLTNPYD--P  435 (487)
T ss_pred             EEEEcCCCCHHHHHHHHHhCCEEEECcc--ccccCcchhhHHhhhcCCCCCEEEeccccchhhc---CCCEEECCCC--H
Confidence            67777775  889999999999999999  9999999999999998    99999999988766   3579999998  9


Q ss_pred             hHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017085          321 TPLAKNIVKLATH-VERRLTMGKRGYERVKEIFQEHHMAERIAVVL  365 (377)
Q Consensus       321 ~~la~~i~~l~~~-~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~  365 (377)
                      +++|++|.++++. .+++.+..+..++.+ .+++...+++.+..-+
T Consensus       436 ~~~A~ai~~AL~m~~~Er~~R~~~l~~~v-~~~d~~~W~~~fl~~l  480 (487)
T TIGR02398       436 VRMDETIYVALAMPKAEQQARMREMFDAV-NYYDVQRWADEFLAAV  480 (487)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHh
Confidence            9999999999994 445555566666666 5589999998887544

Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=99.90  E-value=5e-22  Score=181.26  Aligned_cols=317  Identities=15%  Similarity=0.119  Sum_probs=195.7

Q ss_pred             HhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEE--------------EccchhHHHhhhcccEEEEcCchh
Q 017085            3 LAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI--------------SAKGQETINTALKADLIVLNTAVA   68 (377)
Q Consensus         3 la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~Div~~~~~~~   68 (377)
                      ++++|++.++++.+++..........   ....+....+.+.              .......+++..+||+||+++. .
T Consensus        20 l~~~L~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~l~~~kPdivi~~~~-~   95 (380)
T PRK00025         20 LIRALKARAPNLEFVGVGGPRMQAAG---CESLFDMEELAVMGLVEVLPRLPRLLKIRRRLKRRLLAEPPDVFIGIDA-P   95 (380)
T ss_pred             HHHHHHhcCCCcEEEEEccHHHHhCC---CccccCHHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCC-C
Confidence            68899998999999986542111000   0000000111111              1123445567789999999863 2


Q ss_pred             hhHH---HHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcC
Q 017085           69 GKWL---DAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLG  145 (377)
Q Consensus        69 ~~~~---~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ng  145 (377)
                      +.+.   ..+...+     .|++.+.+.....+......+..+.+|.+++.+....+++.     ..|.   ++.+++|+
T Consensus        96 ~~~~~~a~~a~~~~-----ip~i~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~-----~~g~---~~~~~G~p  162 (380)
T PRK00025         96 DFNLRLEKKLRKAG-----IPTIHYVSPSVWAWRQGRAFKIAKATDHVLALFPFEAAFYD-----KLGV---PVTFVGHP  162 (380)
T ss_pred             CCCHHHHHHHHHCC-----CCEEEEeCCchhhcCchHHHHHHHHHhhheeCCccCHHHHH-----hcCC---CeEEECcC
Confidence            2222   1122222     36665555432122233333456788999999988877765     3343   25555555


Q ss_pred             ChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEE-EEecc-cccc-chhHHHHHHHHHHHHHHhhhcccCCCeEEEEEe
Q 017085          146 NSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLF-AIINS-VSRG-KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIG  222 (377)
Q Consensus       146 i~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i-~~~G~-~~~~-Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G  222 (377)
                      +......  .      ..+...++.++++++.+++ ++.|+ .... ++.+.+++++..+.+       +.++++++++|
T Consensus       163 ~~~~~~~--~------~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~-------~~~~~~~ii~~  227 (380)
T PRK00025        163 LADAIPL--L------PDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQ-------RYPDLRFVLPL  227 (380)
T ss_pred             HHHhccc--c------cChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH-------hCCCeEEEEec
Confidence            5332110  0      0135678889998776654 44453 3332 346788888887654       33789999987


Q ss_pred             cCCCcccHHHHHHHHHHHhc-CCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe------
Q 017085          223 SDMNAQTKFESELRNYVMQK-KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT------  295 (377)
Q Consensus       223 ~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s------  295 (377)
                      ++.    +..+.+++.+++. ++.  +.+..  +++..+|+.||+++.+|       |.+.+|||++|+|+|++      
T Consensus       228 ~~~----~~~~~~~~~~~~~~~~~--v~~~~--~~~~~~~~~aDl~v~~s-------G~~~lEa~a~G~PvI~~~~~~~~  292 (380)
T PRK00025        228 VNP----KRREQIEEALAEYAGLE--VTLLD--GQKREAMAAADAALAAS-------GTVTLELALLKVPMVVGYKVSPL  292 (380)
T ss_pred             CCh----hhHHHHHHHHhhcCCCC--eEEEc--ccHHHHHHhCCEEEECc-------cHHHHHHHHhCCCEEEEEccCHH
Confidence            632    4567777777776 553  55544  58999999999999976       67888999999999987      


Q ss_pred             -----------CCCCcccceecCc--ceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 017085          296 -----------AAGGTTEIVVNGT--TGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIA  362 (377)
Q Consensus       296 -----------~~~~~~e~~~~~~--~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~  362 (377)
                                 +.+++++++.++.  .+++.+..+  ++++++++.++++|++.+++|++++.+.... . ....++++.
T Consensus       293 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~-~-~~~a~~~~~  368 (380)
T PRK00025        293 TFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEAT--PEKLARALLPLLADGARRQALLEGFTELHQQ-L-RCGADERAA  368 (380)
T ss_pred             HHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCC--HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-h-CCCHHHHHH
Confidence                       3455667766543  345555555  9999999999999999999999987654432 2 223455555


Q ss_pred             HHHHHHHh
Q 017085          363 VVLKEVLK  370 (377)
Q Consensus       363 ~~~~~~~~  370 (377)
                      +.+.+++.
T Consensus       369 ~~i~~~~~  376 (380)
T PRK00025        369 QAVLELLK  376 (380)
T ss_pred             HHHHHHhh
Confidence            55555443

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)

Probab=99.90  E-value=1.6e-21  Score=176.86  Aligned_cols=253  Identities=17%  Similarity=0.105  Sum_probs=169.4

Q ss_pred             hHHHhhhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecc----cccchhhhccccccceeeeeccchhhHhh
Q 017085           50 ETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRG----HYFKLDYVKHLPLVAGAMIDSHVTAEYWK  125 (377)
Q Consensus        50 ~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~----~~~~~~~~~~~~~~~~~~~~s~~~~~~~~  125 (377)
                      ...++..+||+||+|+.....+.........   ..|++...|+..+    ..+........+.+|.+++.++...+++.
T Consensus        81 ~~~l~~~~pDvV~~~g~~~~~~~~~~aa~~~---~iPvv~~~~g~~s~~~~~~~~~~r~~~~~~ad~~~~~s~~~~~~l~  157 (363)
T cd03786          81 EAVLLEEKPDLVLVLGDTNETLAAALAAFKL---GIPVAHVEAGLRSFDRGMPDEENRHAIDKLSDLHFAPTEEARRNLL  157 (363)
T ss_pred             HHHHHHhCCCEEEEeCCchHHHHHHHHHHHc---CCCEEEEecccccCCCCCCchHHHHHHHHHhhhccCCCHHHHHHHH
Confidence            3445667999999997543322221111111   2366655444322    11111111234577889999998888776


Q ss_pred             hhhhhhhhccCCCeEEEEcCC-hhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccc---cchhHHHHHHHHH
Q 017085          126 NRTRERLRIKMPDTYVVHLGN-SKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR---GKGQDLFLHSFYE  201 (377)
Q Consensus       126 ~~~~~~~~~~~~~~~vi~ngi-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~---~Kg~~~ll~a~~~  201 (377)
                           +.|++++++.+++|++ |...+.....      .....++.++++++.+++++.|+...   .|+++.+++++..
T Consensus       158 -----~~G~~~~kI~vign~v~d~~~~~~~~~------~~~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~  226 (363)
T cd03786         158 -----QEGEPPERIFVVGNTMIDALLRLLELA------KKELILELLGLLPKKYILVTLHRVENVDDGEQLEEILEALAE  226 (363)
T ss_pred             -----HcCCCcccEEEECchHHHHHHHHHHhh------ccchhhhhcccCCCCEEEEEeCCccccCChHHHHHHHHHHHH
Confidence                 5688889999999996 4332221111      01223567788777778888898764   7999999999987


Q ss_pred             HHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCC-CCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCcc
Q 017085          202 SLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI-QDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECF  278 (377)
Q Consensus       202 l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~  278 (377)
                      +..         .++.+++.|++     +..+.+++.+.++++ .+++.|.|..  +++..+|+.||+++.+|.      
T Consensus       227 l~~---------~~~~vi~~~~~-----~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg------  286 (363)
T cd03786         227 LAE---------EDVPVVFPNHP-----RTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLTDSG------  286 (363)
T ss_pred             HHh---------cCCEEEEECCC-----ChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEEEEcCc------
Confidence            633         34666666655     356778888888776 6789999864  789999999999999883      


Q ss_pred             chHHHHHHHcCCcEEEeCC-CCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHH
Q 017085          279 GRITIEAMAFQLPVLGTAA-GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMG  341 (377)
Q Consensus       279 ~~~~~Ea~a~g~PvI~s~~-~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~  341 (377)
                      | .+.|||++|+|+|+++. +...+.+.+   |+.+..++ ++++++++|.++++++..+..|.
T Consensus       287 g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~---g~~~~~~~-~~~~i~~~i~~ll~~~~~~~~~~  345 (363)
T cd03786         287 G-IQEEASFLGVPVLNLRDRTERPETVES---GTNVLVGT-DPEAILAAIEKLLSDEFAYSLMS  345 (363)
T ss_pred             c-HHhhhhhcCCCEEeeCCCCccchhhhe---eeEEecCC-CHHHHHHHHHHHhcCchhhhcCC
Confidence            3 47899999999999974 445566543   44443331 28999999999999987766653

The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st

>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.90  E-value=2e-22  Score=170.35  Aligned_cols=118  Identities=36%  Similarity=0.471  Sum_probs=100.6

Q ss_pred             EeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc---CCHH
Q 017085          182 IINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT---LTVA  258 (377)
Q Consensus       182 ~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~---~~~~  258 (377)
                      ++|++.+.||++.+++++..+.+       +.++++++++|.+.     ........+.+.+..++|.+.|+.   +++.
T Consensus       109 ~~g~~~~~k~~~~~~~a~~~l~~-------~~~~~~~~i~G~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  176 (229)
T cd01635         109 FVGRLAPEKGLDDLIEAFALLKE-------RGPDLKLVIAGDGP-----EREYLEELLAALLLLDRVIFLGGLDPEELLA  176 (229)
T ss_pred             EEEeecccCCHHHHHHHHHHHHH-------hCCCeEEEEEeCCC-----ChHHHHHHHHhcCCcccEEEeCCCCcHHHHH
Confidence            89999999999999999998755       34789999999984     334444446677778899999984   5566


Q ss_pred             HHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeee
Q 017085          259 PYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLH  313 (377)
Q Consensus       259 ~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~  313 (377)
                      .+++.||++++||.  .|++|++++|||++|+|+|+|+.++..|++.++++|+++
T Consensus       177 ~~~~~~di~l~~~~--~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~  229 (229)
T cd01635         177 LLLAAADVFVLPSL--REGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV  229 (229)
T ss_pred             HHhhcCCEEEeccc--ccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence            66677999999999  899999999999999999999999999999888899874

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional

Probab=99.89  E-value=1.2e-21  Score=174.72  Aligned_cols=247  Identities=10%  Similarity=0.110  Sum_probs=169.3

Q ss_pred             HHhhhcc-cEEEEcCchhhh--HHHHHhhcCCCccccceeEEeeeecccccc------hhhhccccccceeeeeccchhh
Q 017085           52 INTALKA-DLIVLNTAVAGK--WLDAVLKEDVPRVLPNVLWWIHEMRGHYFK------LDYVKHLPLVAGAMIDSHVTAE  122 (377)
Q Consensus        52 ~~~~~~~-Div~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~s~~~~~  122 (377)
                      ++...++ |+||+++|....  +...++. .+.....|+++++|+.++....      ......++.+|.++++|..+.+
T Consensus        58 ~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~-~~k~~~~k~i~~ihD~~~~~~~~~~~~~~~~~~~~~~aD~iI~~S~~~~~  136 (333)
T PRK09814         58 ILASLKPGDIVIFQFPTWNGFEFDRLFVD-KLKKKQVKIIILIHDIEPLRFDSNYYLMKEEIDMLNLADVLIVHSKKMKD  136 (333)
T ss_pred             HHhcCCCCCEEEEECCCCchHHHHHHHHH-HHHHcCCEEEEEECCcHHHhccccchhhHHHHHHHHhCCEEEECCHHHHH
Confidence            3444566 999999976432  1122221 1222246899999998754322      2234556899999999999999


Q ss_pred             HhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHH
Q 017085          123 YWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYES  202 (377)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l  202 (377)
                      ++.     ..|++..++.++++..+.......              .   .+...+.++|+|++....+    +..    
T Consensus       137 ~l~-----~~g~~~~~i~~~~~~~~~~~~~~~--------------~---~~~~~~~i~yaG~l~k~~~----l~~----  186 (333)
T PRK09814        137 RLV-----EEGLTTDKIIVQGIFDYLNDIELV--------------K---TPSFQKKINFAGNLEKSPF----LKN----  186 (333)
T ss_pred             HHH-----HcCCCcCceEeccccccccccccc--------------c---cccCCceEEEecChhhchH----HHh----
Confidence            886     446666778777765543211000              0   0134568999999984322    110    


Q ss_pred             HHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCC-------
Q 017085          203 LELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQA-------  273 (377)
Q Consensus       203 ~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~-------  273 (377)
                               ..++++|+|+|+|+.     ..         ...++|+|.|+.  +++..+|+. |+.+.+...       
T Consensus       187 ---------~~~~~~l~i~G~g~~-----~~---------~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~  242 (333)
T PRK09814        187 ---------WSQGIKLTVFGPNPE-----DL---------ENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYG  242 (333)
T ss_pred             ---------cCCCCeEEEECCCcc-----cc---------ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccch
Confidence                     116799999999842     11         234689999987  788888888 766654320       


Q ss_pred             --CCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHh
Q 017085          274 --WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEI  351 (377)
Q Consensus       274 --~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~  351 (377)
                        ..-++|.++.|+||+|+|||+++.+++++++.++++|++++  +  .++++++|.++  +++.+.+|++++++.. ++
T Consensus       243 ~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v~--~--~~el~~~l~~~--~~~~~~~m~~n~~~~~-~~  315 (333)
T PRK09814        243 EYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGLGFVVD--S--LEELPEIIDNI--TEEEYQEMVENVKKIS-KL  315 (333)
T ss_pred             hhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCceEEeC--C--HHHHHHHHHhc--CHHHHHHHHHHHHHHH-HH
Confidence              02468999999999999999999999999999999999998  4  78999999885  4577899999999866 44


Q ss_pred             cCHHHHHHH
Q 017085          352 FQEHHMAER  360 (377)
Q Consensus       352 f~~~~~~~~  360 (377)
                      +.-....++
T Consensus       316 ~~~g~~~~~  324 (333)
T PRK09814        316 LRNGYFTKK  324 (333)
T ss_pred             HhcchhHHH
Confidence            554444433

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase

Probab=99.88  E-value=6.3e-21  Score=172.81  Aligned_cols=275  Identities=16%  Similarity=0.149  Sum_probs=175.7

Q ss_pred             chhHHHhhhcccEEEEcCchhhhHHHHH--hhcCCCccccceeEEeeeecc--cc--cchhh-hccc-cccceeeeeccc
Q 017085           48 GQETINTALKADLIVLNTAVAGKWLDAV--LKEDVPRVLPNVLWWIHEMRG--HY--FKLDY-VKHL-PLVAGAMIDSHV  119 (377)
Q Consensus        48 ~~~~~~~~~~~Div~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~h~~~~--~~--~~~~~-~~~~-~~~~~~~~~s~~  119 (377)
                      .+..++++.+||+||+|+.....+..++  ...++     |++...++..+  .+  +.... +..+ +.++.+++.|+.
T Consensus        77 ~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~~~i-----pv~h~~~g~~s~~~~~~~~~~~~r~~~~~~ad~~~~~s~~  151 (365)
T TIGR00236        77 GLEELLLEEKPDIVLVQGDTTTTLAGALAAFYLQI-----PVGHVEAGLRTGDRYSPMPEEINRQLTGHIADLHFAPTEQ  151 (365)
T ss_pred             HHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHhCC-----CEEEEeCCCCcCCCCCCCccHHHHHHHHHHHHhccCCCHH
Confidence            3455667899999999975433222222  22233     44433222221  11  11111 2223 346889999998


Q ss_pred             hhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccc-cccchhHHHHHH
Q 017085          120 TAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV-SRGKGQDLFLHS  198 (377)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~-~~~Kg~~~ll~a  198 (377)
                      .++.+.     +.|++++++.+++||+..........     ..+..++++++. ++.++++..+|. ...||++.++++
T Consensus       152 ~~~~l~-----~~G~~~~~I~vign~~~d~~~~~~~~-----~~~~~~~~~~~~-~~~~vl~~~hr~~~~~k~~~~ll~a  220 (365)
T TIGR00236       152 AKDNLL-----RENVKADSIFVTGNTVIDALLTNVEI-----AYSSPVLSEFGE-DKRYILLTLHRRENVGEPLENIFKA  220 (365)
T ss_pred             HHHHHH-----HcCCCcccEEEeCChHHHHHHHHHhh-----ccchhHHHhcCC-CCCEEEEecCchhhhhhHHHHHHHH
Confidence            888776     45888889999999974433222111     012445666763 334444444443 345899999999


Q ss_pred             HHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCC
Q 017085          199 FYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGE  276 (377)
Q Consensus       199 ~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e  276 (377)
                      +.++.+       +.++++++++|.+.+   ...+.+   .+.++..++|+|+|..  .++..+++.||+++.+|     
T Consensus       221 ~~~l~~-------~~~~~~~vi~~~~~~---~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~S-----  282 (365)
T TIGR00236       221 IREIVE-------EFEDVQIVYPVHLNP---VVREPL---HKHLGDSKRVHLIEPLEYLDFLNLAANSHLILTDS-----  282 (365)
T ss_pred             HHHHHH-------HCCCCEEEEECCCCh---HHHHHH---HHHhCCCCCEEEECCCChHHHHHHHHhCCEEEECC-----
Confidence            987654       337888888865421   122222   3334556789999976  46788999999998776     


Q ss_pred             ccchHHHHHHHcCCcEEEe-CCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHH
Q 017085          277 CFGRITIEAMAFQLPVLGT-AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEH  355 (377)
Q Consensus       277 ~~~~~~~Ea~a~g~PvI~s-~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~  355 (377)
                        |..++|||++|+|||++ +.++.++.+.++ .+++++ .|  ++++++++.++++|++.+.+++.+...+ .+..+++
T Consensus       283 --g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv~-~d--~~~i~~ai~~ll~~~~~~~~~~~~~~~~-g~~~a~~  355 (365)
T TIGR00236       283 --GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLVG-TD--KENITKAAKRLLTDPDEYKKMSNASNPY-GDGEASE  355 (365)
T ss_pred             --hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEeC-CC--HHHHHHHHHHHHhChHHHHHhhhcCCCC-cCchHHH
Confidence              44579999999999996 678888888755 566664 45  9999999999999999888887665322 2234455


Q ss_pred             HHHHHHHH
Q 017085          356 HMAERIAV  363 (377)
Q Consensus       356 ~~~~~~~~  363 (377)
                      ++++.+.+
T Consensus       356 ri~~~l~~  363 (365)
T TIGR00236       356 RIVEELLN  363 (365)
T ss_pred             HHHHHHHh
Confidence            55554443

Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.86  E-value=1.9e-19  Score=174.27  Aligned_cols=292  Identities=15%  Similarity=0.151  Sum_probs=202.6

Q ss_pred             ccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc-------cchhhhccccccceeeeeccchhhHhhhhhhh
Q 017085           58 ADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRE  130 (377)
Q Consensus        58 ~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~-------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  130 (377)
                      =|+|++|+.... .+...++...+.  .++.+.+|-.++..       +......-+-.+|.|-..+...+..|.....+
T Consensus       232 gD~VWVHDYHL~-LlP~~LR~~~p~--~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~r  308 (934)
T PLN03064        232 GDVVWCHDYHLM-FLPKCLKEYNSN--MKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTR  308 (934)
T ss_pred             CCEEEEecchhh-HHHHHHHHhCCC--CcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHH
Confidence            389999985433 333344444444  37888888665432       11222333346777777777777766665544


Q ss_pred             hhhcc-----------CCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHH
Q 017085          131 RLRIK-----------MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSF  199 (377)
Q Consensus       131 ~~~~~-----------~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~  199 (377)
                      .+|..           .-++.++|.|||++.|...............++++++   ++.+|+.++|++..||+...+.|+
T Consensus       309 lLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~---g~kiIlgVDRLD~~KGI~~kL~Af  385 (934)
T PLN03064        309 ILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFA---GRKVMLGVDRLDMIKGIPQKILAF  385 (934)
T ss_pred             HhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhC---CceEEEEeeccccccCHHHHHHHH
Confidence            44432           1236788999999998765443333344566777775   567899999999999999999999


Q ss_pred             HHHHHHHhhhcccCCCe----EEEEEecCCCcccHHHHH----HHHHHHhcC----CCC--cEEEecC-c--CCHHHHHH
Q 017085          200 YESLELIKEKKLEVPSV----HAVIIGSDMNAQTKFESE----LRNYVMQKK----IQD--RVHFVNK-T--LTVAPYLA  262 (377)
Q Consensus       200 ~~l~~~l~~~~~~~~~~----~l~i~G~~~~~~~~~~~~----l~~~~~~~~----~~~--~v~~~g~-~--~~~~~~~~  262 (377)
                      +.+++       ++|++    .|+-+......+.+.+++    +.+.+.+.+    -.+  -|+++.. .  +++.++|+
T Consensus       386 E~fL~-------~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~  458 (934)
T PLN03064        386 EKFLE-------ENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYA  458 (934)
T ss_pred             HHHHH-------hCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHH
Confidence            98766       33554    344333221111123333    444333322    111  1444432 2  78999999


Q ss_pred             hcCEEEecCCCCCCccchHHHHHHHcCC----cEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhh-CHHHH
Q 017085          263 AIDVLVQNSQAWGECFGRITIEAMAFQL----PVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERR  337 (377)
Q Consensus       263 ~adv~l~ps~~~~e~~~~~~~Ea~a~g~----PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~-~~~~~  337 (377)
                      .||++|+||.  .||++++..|||+|+.    ++|.|..+|..+.+  +..+++++|.|  ++++|++|.++++ +++++
T Consensus       459 ~ADV~lvTsl--rDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L--~~~AllVNP~D--~~~vA~AI~~AL~M~~~Er  532 (934)
T PLN03064        459 VTDVALVTSL--RDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL--GAGAILVNPWN--ITEVAASIAQALNMPEEER  532 (934)
T ss_pred             hCCEEEeCcc--ccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh--CCceEEECCCC--HHHHHHHHHHHHhCCHHHH
Confidence            9999999999  9999999999999954    55559988888877  44689999998  9999999999999 88889


Q ss_pred             HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 017085          338 LTMGKRGYERVKEIFQEHHMAERIAVVLKEVL  369 (377)
Q Consensus       338 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  369 (377)
                      .+.....++++. .+++..+++.+.+-+.+..
T Consensus       533 ~~r~~~~~~~V~-~~d~~~Wa~~fl~~L~~~~  563 (934)
T PLN03064        533 EKRHRHNFMHVT-THTAQEWAETFVSELNDTV  563 (934)
T ss_pred             HHHHHHHHhhcc-cCCHHHHHHHHHHHHHHHH
Confidence            999999999874 5999999999888776664

>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=99.85  E-value=1.8e-19  Score=162.37  Aligned_cols=225  Identities=28%  Similarity=0.410  Sum_probs=178.1

Q ss_pred             cceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCC--eEEEEecccc
Q 017085          110 VAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNED--LLFAIINSVS  187 (377)
Q Consensus       110 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~--~~i~~~G~~~  187 (377)
                      .+.++..+.........     .. ...++.+++++++...+...               ..++..+.  ..++++|++.
T Consensus       151 ~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~i~~~g~~~  209 (381)
T COG0438         151 ADRVIAVSPALKELLEA-----LG-VPNKIVVIPNGIDTEKFAPA---------------RIGLLPEGGKFVVLYVGRLD  209 (381)
T ss_pred             ccEEEECCHHHHHHHHH-----hC-CCCCceEecCCcCHHHcCcc---------------ccCCCcccCceEEEEeeccC
Confidence            55566666655333332     22 22378999999999876531               11222333  7899999999


Q ss_pred             ccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcC--CHHHHHHhcC
Q 017085          188 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL--TVAPYLAAID  265 (377)
Q Consensus       188 ~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~--~~~~~~~~ad  265 (377)
                      +.||++.+++++..+.+       ..+++.++++|.+...    ...+...+.+.+..+++.|.|...  ++..+++.||
T Consensus       210 ~~k~~~~~i~~~~~~~~-------~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~  278 (381)
T COG0438         210 PEKGLDLLIEAAAKLKK-------RGPDIKLVIVGDGPER----REELEKLAKKLGLEDNVKFLGYVPDEELAELLASAD  278 (381)
T ss_pred             hhcCHHHHHHHHHHhhh-------hcCCeEEEEEcCCCcc----HHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCC
Confidence            99999999999997755       2244899999998532    355666778888778999999874  7888899999


Q ss_pred             EEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHH
Q 017085          266 VLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGY  345 (377)
Q Consensus       266 v~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~  345 (377)
                      ++++||.  .|++|++++|||++|+|||+++.++..+++.++.+|+++...+  .+++++++..++++++.+..+...++
T Consensus       279 ~~v~ps~--~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~  354 (381)
T COG0438         279 VFVLPSL--SEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGD--VEELADALEQLLEDPELREELGEAAR  354 (381)
T ss_pred             EEEeccc--cccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCC--HHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            9999999  7999999999999999999999999999998876788766665  89999999999999888888888677


Q ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHh
Q 017085          346 ERVKEIFQEHHMAERIAVVLKEVLK  370 (377)
Q Consensus       346 ~~~~~~f~~~~~~~~~~~~~~~~~~  370 (377)
                      +.+.+.|+|+.+++++.+++.....
T Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~~~~  379 (381)
T COG0438         355 ERVEEEFSWERIAEQLLELYEELLA  379 (381)
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHh
Confidence            7676889999999999999987654

>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=99.85  E-value=6.5e-19  Score=146.98  Aligned_cols=235  Identities=20%  Similarity=0.212  Sum_probs=184.0

Q ss_pred             cccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEecc
Q 017085          106 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS  185 (377)
Q Consensus       106 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~  185 (377)
                      .-..+|.+++.|.++.....+-    .  ...++.+++.+.+.+........               -..+.+.++++|.
T Consensus       219 ~G~~ad~vm~NssWT~nHI~qi----W--~~~~~~iVyPPC~~e~lks~~~t---------------e~~r~~~ll~l~Q  277 (465)
T KOG1387|consen  219 AGSKADIVMTNSSWTNNHIKQI----W--QSNTCSIVYPPCSTEDLKSKFGT---------------EGERENQLLSLAQ  277 (465)
T ss_pred             ccccceEEEecchhhHHHHHHH----h--hccceeEEcCCCCHHHHHHHhcc---------------cCCcceEEEEEee
Confidence            3368899999999998887752    2  23678899988888744332211               0255688999999


Q ss_pred             ccccchhHHHHHHHH--HHHHHHhhhcccCCCeEEEEEecCCC-cccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHH
Q 017085          186 VSRGKGQDLFLHSFY--ESLELIKEKKLEVPSVHAVIIGSDMN-AQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPY  260 (377)
Q Consensus       186 ~~~~Kg~~~ll~a~~--~l~~~l~~~~~~~~~~~l~i~G~~~~-~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~  260 (377)
                      ++|.|++. +++.++  .....+.+   ..++++|+++|+... ++.+..+.+++++++++++.+|.|.-..  +++..+
T Consensus       278 ~RPEKnH~-~Lql~Al~~~~~pl~a---~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~l  353 (465)
T KOG1387|consen  278 FRPEKNHK-ILQLFALYLKNEPLEA---SVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVEL  353 (465)
T ss_pred             cCcccccH-HHHHHHHHHhcCchhh---ccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHH
Confidence            99999999 555444  33222222   236799999999644 3345678889999999999999999876  899999


Q ss_pred             HHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC-cccceec---CcceeeecCCCCChhHHHHHHHHHhh-CHH
Q 017085          261 LAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG-TTEIVVN---GTTGLLHPVGKEGITPLAKNIVKLAT-HVE  335 (377)
Q Consensus       261 ~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~-~~e~~~~---~~~g~~~~~~~~~~~~la~~i~~l~~-~~~  335 (377)
                      |..|.+.+..--  .|.||+.++|+||+|+-+|+.+.|| .-+++.+   ..+|++.+.    .++.++++.+++. +++
T Consensus       354 L~~a~iGvh~Mw--NEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~t----~~EYaE~iLkIv~~~~~  427 (465)
T KOG1387|consen  354 LGKATIGVHTMW--NEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAPT----DEEYAEAILKIVKLNYD  427 (465)
T ss_pred             hccceeehhhhh--hhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecCC----hHHHHHHHHHHHHcCHH
Confidence            999999998876  8999999999999999999998776 4455554   357898853    7899999999988 788


Q ss_pred             HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcc
Q 017085          336 RRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKS  372 (377)
Q Consensus       336 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  372 (377)
                      .+..|+.+||+.+ .+|+-....+.+...++.++++.
T Consensus       428 ~r~~~r~~AR~s~-~RFsE~~F~kd~~~~i~kll~e~  463 (465)
T KOG1387|consen  428 ERNMMRRNARKSL-ARFGELKFDKDWENPICKLLEEE  463 (465)
T ss_pred             HHHHHHHHHHHHH-HHhhHHHHHHhHhHHHHHhhccc
Confidence            8999999999876 56999999999999998888654

>TIGR00215 lpxB lipid-A-disaccharide synthase

Probab=99.82  E-value=3.9e-18  Score=154.54  Aligned_cols=311  Identities=15%  Similarity=0.078  Sum_probs=184.9

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhh-h-hhhhcccCc-eEE--------EccchhHHHhhhcccEEEEcCchhhh
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYS-L-EHKMWDRGV-QVI--------SAKGQETINTALKADLIVLNTAVAGK   70 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~-~-~~~~~~~~~-~~~--------~~~~~~~~~~~~~~Div~~~~~~~~~   70 (377)
                      .|+++|++.|+++.++...++.-....... + ...+...|+ ..+        .......++++.+||+|++++.....
T Consensus        23 al~~~l~~~~~~~~~~g~gg~~m~~~g~~~~~~~~~l~v~G~~~~l~~~~~~~~~~~~~~~~l~~~kPd~vi~~g~~~~~  102 (385)
T TIGR00215        23 GLRQQLKEHYPNARFIGVAGPRMAAEGCEVLYSMEELSVMGLREVLGRLGRLLKIRKEVVQLAKQAKPDLLVGIDAPDFN  102 (385)
T ss_pred             HHHHHHHhcCCCcEEEEEccHHHHhCcCccccChHHhhhccHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCcc
Confidence            378999999999999986643100000000 0 000111111 000        01133455677999999999853322


Q ss_pred             HHH--HHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChh
Q 017085           71 WLD--AVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSK  148 (377)
Q Consensus        71 ~~~--~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~  148 (377)
                      +..  ++...+     .|+++++.-..+.|-....+.+.+.+|.+++.+....+++.+     .|   .++.++.|++..
T Consensus       103 ~~~a~aa~~~g-----ip~v~~i~P~~waw~~~~~r~l~~~~d~v~~~~~~e~~~~~~-----~g---~~~~~vGnPv~~  169 (385)
T TIGR00215       103 LTKELKKKDPG-----IKIIYYISPQVWAWRKWRAKKIEKATDFLLAILPFEKAFYQK-----KN---VPCRFVGHPLLD  169 (385)
T ss_pred             HHHHHHHhhCC-----CCEEEEeCCcHhhcCcchHHHHHHHHhHhhccCCCcHHHHHh-----cC---CCEEEECCchhh
Confidence            222  222222     356544321111222333444557889999999988887653     22   356678888743


Q ss_pred             hhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEe-c-cccc-cchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCC
Q 017085          149 ELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII-N-SVSR-GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDM  225 (377)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~-G-~~~~-~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~  225 (377)
                      ......       ..+...|+.++++++.+++++. | |..+ .|+...+++++..+.+       +.+++++++.+...
T Consensus       170 ~~~~~~-------~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~-------~~p~~~~vi~~~~~  235 (385)
T TIGR00215       170 AIPLYK-------PDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQ-------QEPDLRRVLPVVNF  235 (385)
T ss_pred             hccccC-------CCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHH-------hCCCeEEEEEeCCc
Confidence            321100       1134568889998777766554 3 5555 6788889999887654       34788887765432


Q ss_pred             CcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC-CC------
Q 017085          226 NAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA-AG------  298 (377)
Q Consensus       226 ~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~-~~------  298 (377)
                          ...+.+++..+.++....+.+.+.  ++..+|++||+++++|       |.+.+|+|++|+|+|.+. .+      
T Consensus       236 ----~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~l~aADl~V~~S-------Gt~tlEa~a~G~P~Vv~yk~~pl~~~~  302 (385)
T TIGR00215       236 ----KRRLQFEQIKAEYGPDLQLHLIDG--DARKAMFAADAALLAS-------GTAALEAALIKTPMVVGYRMKPLTFLI  302 (385)
T ss_pred             ----hhHHHHHHHHHHhCCCCcEEEECc--hHHHHHHhCCEEeecC-------CHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence                234556666666666556776653  6778999999999988       566779999999999872 21      


Q ss_pred             ----------CcccceecCcceeeecCCCCChhHHHHHHHHHhhCH----HHHHHHHHHHHHHHHHhcC
Q 017085          299 ----------GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHV----ERRLTMGKRGYERVKEIFQ  353 (377)
Q Consensus       299 ----------~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~----~~~~~~~~~~~~~~~~~f~  353 (377)
                                +++.++.+....-.+-.++-+++.+++.+.++++|+    +.+.++.+...+ +.+...
T Consensus       303 ~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~-~~~~l~  370 (385)
T TIGR00215       303 ARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEE-LRQRIY  370 (385)
T ss_pred             HHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHH-HHHHhc
Confidence                      222333222211111222224889999999999999    877777666554 334443

Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA

>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1

Probab=99.81  E-value=8.2e-18  Score=156.19  Aligned_cols=219  Identities=12%  Similarity=0.131  Sum_probs=171.0

Q ss_pred             ccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEec
Q 017085          105 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN  184 (377)
Q Consensus       105 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G  184 (377)
                      ..+..++.+++.+....+.+..++.+..  ...++..||.+.- ... +....                 .....+++++
T Consensus       268 ~~~~~~d~iIv~T~~q~~~l~~~~~~~~--~~~~v~~Ip~~~~-~~~-~~~s~-----------------r~~~~~I~v~  326 (519)
T TIGR03713       268 ESLSRADLIIVDREDIERLLEENYRENY--VEFDISRITPFDT-RLR-LGQSQ-----------------QLYETEIGFW  326 (519)
T ss_pred             hChhhcCeEEEcCHHHHHHHHHHhhhcc--cCCcceeeCccce-EEe-cChhh-----------------cccceEEEEE
Confidence            3456788899888776666665433210  1134556664433 111 10000                 2233456677


Q ss_pred             --cccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCC-----------------
Q 017085          185 --SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ-----------------  245 (377)
Q Consensus       185 --~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~-----------------  245 (377)
                        |+ +.|.++.+|+++.++.+       +.|+++|.+.|-+.+.  ...+.+++.++++++.                 
T Consensus       327 idrL-~ek~~~~~I~av~~~~~-------~~p~~~L~~~gy~~~~--~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~  396 (519)
T TIGR03713       327 IDGL-SDEELQQILQQLLQYIL-------KNPDYELKILTYNNDN--DITQLLEDILEQINEEYNQDKNFFSLSEQDENQ  396 (519)
T ss_pred             cCCC-ChHHHHHHHHHHHHHHh-------hCCCeEEEEEEecCch--hHHHHHHHHHHHHHhhhchhhhccccchhhhhh
Confidence              99 99999999999998866       5599999999987431  3456777777777666                 


Q ss_pred             ------------CcEEEecCcC--CHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCccee
Q 017085          246 ------------DRVHFVNKTL--TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGL  311 (377)
Q Consensus       246 ------------~~v~~~g~~~--~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~  311 (377)
                                  ++|.|.|...  ++.+.|..+.+++.+|.  .|+++ +++||++.|+|+|   .-|..+++.+++||+
T Consensus       397 ~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~--~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~  470 (519)
T TIGR03713       397 PILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSK--EPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGY  470 (519)
T ss_pred             hcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCC--CCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcE
Confidence                        7999999886  99999999999999999  99999 9999999999999   455689999999999


Q ss_pred             eecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017085          312 LHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL  365 (377)
Q Consensus       312 ~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~  365 (377)
                      ++  ++  .++|+++|..++++++.+.++...+++.+ ++||-+++.++|.+++
T Consensus       471 li--~d--~~~l~~al~~~L~~~~~wn~~~~~sy~~~-~~yS~~~i~~kW~~~~  519 (519)
T TIGR03713       471 II--DD--ISELLKALDYYLDNLKNWNYSLAYSIKLI-DDYSSENIIERLNELI  519 (519)
T ss_pred             Ee--CC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHH-HHhhHHHHHHHHHhhC
Confidence            99  45  99999999999999999999999999987 6699999999998763

This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.

>TIGR02094 more_P_ylases alpha-glucan phosphorylases

Probab=99.81  E-value=1.5e-17  Score=156.18  Aligned_cols=186  Identities=13%  Similarity=0.157  Sum_probs=145.8

Q ss_pred             CCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCccc---HHHHHHHHHHHhcCCCCcEE
Q 017085          173 VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQT---KFESELRNYVMQKKIQDRVH  249 (377)
Q Consensus       173 ~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~---~~~~~l~~~~~~~~~~~~v~  249 (377)
                      ++++.+++++++|+..+||+++++.++..+.+.+.+.   ..+++|++.|.+.+.+.   .+.+.+..++++...+++|.
T Consensus       385 ~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~---~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~  461 (601)
T TIGR02094       385 LDPDVLTIGFARRFATYKRADLIFRDLERLARILNNP---ERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIV  461 (601)
T ss_pred             cCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCC---CCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEE
Confidence            4567789999999999999999999999887544321   14699999999876421   24556666666544667888


Q ss_pred             EecC-cCCH-HHHHHhcCEEEe-cCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecC-----------
Q 017085          250 FVNK-TLTV-APYLAAIDVLVQ-NSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPV-----------  315 (377)
Q Consensus       250 ~~g~-~~~~-~~~~~~adv~l~-ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~-----------  315 (377)
                      |+.. -..+ ..++++||++++ ||+. .|++|++-+-||..|.+.+++--|...|.. ++.+||.+..           
T Consensus       462 f~~~Yd~~lA~~i~aG~Dv~L~~Psr~-~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~~~~~d  539 (601)
T TIGR02094       462 FLENYDINLARYLVSGVDVWLNNPRRP-LEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDDEEEQD  539 (601)
T ss_pred             EEcCCCHHHHHHHhhhheeEEeCCCCC-cCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCcccccccccc
Confidence            8764 3344 467899999999 9985 899999999999999999999888888876 5679999984           


Q ss_pred             -CCCChhHHHHHHHHHh-----hC-----HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017085          316 -GKEGITPLAKNIVKLA-----TH-----VERRLTMGKRGYERVKEIFQEHHMAERIAVVL  365 (377)
Q Consensus       316 -~~~~~~~la~~i~~l~-----~~-----~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~  365 (377)
                       .|  .++|.++|++.+     ++     |..+.++.+++.+.....|||++++++|.+.|
T Consensus       540 ~~d--a~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y  598 (601)
T TIGR02094       540 RLD--AEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF  598 (601)
T ss_pred             CCC--HHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence             44  899999997765     22     44577888877765545799999999999987

This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.

>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A

Probab=99.79  E-value=3.5e-19  Score=137.70  Aligned_cols=133  Identities=26%  Similarity=0.347  Sum_probs=96.7

Q ss_pred             CeEEEEeccccccchhHHHHH-HHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcC
Q 017085          177 DLLFAIINSVSRGKGQDLFLH-SFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL  255 (377)
Q Consensus       177 ~~~i~~~G~~~~~Kg~~~ll~-a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~  255 (377)
                      -+.|++.|++.+.|+++.+++ ++.++.+       +.|+++|+|+|.+++       ++++.     ..++|+++|+.+
T Consensus         2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~-------~~p~~~l~i~G~~~~-------~l~~~-----~~~~v~~~g~~~   62 (135)
T PF13692_consen    2 ILYIGYLGRIRPDKGLEELIEAALERLKE-------KHPDIELIIIGNGPD-------ELKRL-----RRPNVRFHGFVE   62 (135)
T ss_dssp             -EEEE--S-SSGGGTHHHHHH-HHHHHHH-------HSTTEEEEEECESS--------HHCCH-----HHCTEEEE-S-H
T ss_pred             cccccccccccccccccchhhhHHHHHHH-------HCcCEEEEEEeCCHH-------HHHHh-----cCCCEEEcCCHH
Confidence            368899999999999999999 9987766       448999999999742       23333     125899999998


Q ss_pred             CHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhC
Q 017085          256 TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH  333 (377)
Q Consensus       256 ~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~  333 (377)
                      ++.++++.||+++.|+.. .+++|++++|||++|+|||+++. +..++....+.|+++ .++  +++|+++|.++++|
T Consensus        63 e~~~~l~~~dv~l~p~~~-~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~--~~~l~~~i~~l~~d  135 (135)
T PF13692_consen   63 ELPEILAAADVGLIPSRF-NEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-AND--PEELAEAIERLLND  135 (135)
T ss_dssp             HHHHHHHC-SEEEE-BSS--SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT---HHHHHHHHHHHHH-
T ss_pred             HHHHHHHhCCEEEEEeeC-CCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCC--HHHHHHHHHHHhcC
Confidence            899999999999999863 67899999999999999999998 566677656677777 556  99999999999865

>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.79  E-value=2.6e-16  Score=131.71  Aligned_cols=329  Identities=15%  Similarity=0.114  Sum_probs=219.3

Q ss_pred             hhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEcc------------------------chhHHHhhhccc
Q 017085            4 AFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK------------------------GQETINTALKAD   59 (377)
Q Consensus         4 a~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~D   59 (377)
                      |..|.+.|++|.++....+.+.....       ....+++....                        -...+.....+|
T Consensus        33 A~Sla~~gf~VdliGy~~s~p~e~l~-------~hprI~ih~m~~l~~~~~~p~~~~l~lKvf~Qfl~Ll~aL~~~~~~~  105 (444)
T KOG2941|consen   33 ALSLAKLGFQVDLIGYVESIPLEELL-------NHPRIRIHGMPNLPFLQGGPRVLFLPLKVFWQFLSLLWALFVLRPPD  105 (444)
T ss_pred             HHHHHHcCCeEEEEEecCCCChHHHh-------cCCceEEEeCCCCcccCCCchhhhhHHHHHHHHHHHHHHHHhccCCc
Confidence            67889999999999977664333322       12233332211                        112333458899


Q ss_pred             EEEEcCchhhh--HHHHHhhcCCCccccceeEEeeeeccc-c----------c---chhhhccc-cccceeeeeccchhh
Q 017085           60 LIVLNTAVAGK--WLDAVLKEDVPRVLPNVLWWIHEMRGH-Y----------F---KLDYVKHL-PLVAGAMIDSHVTAE  122 (377)
Q Consensus        60 iv~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~h~~~~~-~----------~---~~~~~~~~-~~~~~~~~~s~~~~~  122 (377)
                      +|.++.|..-.  ++..+... +  ...+.+.+-|++... .          +   .+.+.+++ +.++.-.|++..+.+
T Consensus       106 ~ilvQNPP~iPtliv~~~~~~-l--~~~KfiIDWHNy~Ysl~l~~~~g~~h~lV~l~~~~E~~fgk~a~~nLcVT~AMr~  182 (444)
T KOG2941|consen  106 IILVQNPPSIPTLIVCVLYSI-L--TGAKFIIDWHNYGYSLQLKLKLGFQHPLVRLVRWLEKYFGKLADYNLCVTKAMRE  182 (444)
T ss_pred             EEEEeCCCCCchHHHHHHHHH-H--hcceEEEEehhhHHHHHHHhhcCCCCchHHHHHHHHHHhhcccccchhhHHHHHH
Confidence            99999876322  22222211 1  124677777765321 0          0   01112222 577888888888877


Q ss_pred             HhhhhhhhhhhccCCCeEEEEcCCh-----hh----hHHHhhh---------hhhhhhhHHHHHHHh------CCCCCCe
Q 017085          123 YWKNRTRERLRIKMPDTYVVHLGNS-----KE----LMEVAED---------NVAKRVLREHVRESL------GVRNEDL  178 (377)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~vi~ngi~-----~~----~~~~~~~---------~~~~~~~~~~~r~~~------~~~~~~~  178 (377)
                      ++.+    ..|+.  +..|++.-.+     .+    .|.+...         ...+..++..+-+++      -+++.+.
T Consensus       183 dL~q----nWgi~--ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~pa  256 (444)
T KOG2941|consen  183 DLIQ----NWGIN--RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKKDASGDVQLLPERPA  256 (444)
T ss_pred             HHHH----hcCCc--eeEEEecCCCCCCCchhHHHHHHhhhccccchhhhcccccchhhhhhHhhhcccchhhhccCCCe
Confidence            7766    66653  5666664333     11    1222111         111111122222332      2345556


Q ss_pred             EEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEec-C--cC
Q 017085          179 LFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN-K--TL  255 (377)
Q Consensus       179 ~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g-~--~~  255 (377)
                      +++...++.+..++..+++|+..--+.+.+++...|.+-.+|.|.|     +..+...+.+++.++. +|.+.- +  .+
T Consensus       257 llvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKG-----PlkE~Y~~~I~~~~~~-~v~~~tpWL~aE  330 (444)
T KOG2941|consen  257 LLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKG-----PLKEKYSQEIHEKNLQ-HVQVCTPWLEAE  330 (444)
T ss_pred             EEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCC-----chhHHHHHHHHHhccc-ceeeeecccccc
Confidence            7777788999999999999998554556666667899999999999     6888889999999886 455443 3  38


Q ss_pred             CHHHHHHhcCEEEe--cCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhh-
Q 017085          256 TVAPYLAAIDVLVQ--NSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-  332 (377)
Q Consensus       256 ~~~~~~~~adv~l~--ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~-  332 (377)
                      |...+++.||+.|+  +|.+ .-..|++++....||+||++-+...+.|++++++||++++.    .+++++.+..+.+ 
T Consensus       331 DYP~ll~saDlGVcLHtSSS-GLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~D----s~eLa~ql~~lf~~  405 (444)
T KOG2941|consen  331 DYPKLLASADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFED----SEELAEQLQMLFKN  405 (444)
T ss_pred             cchhHhhccccceEeeecCc-ccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEecc----HHHHHHHHHHHHhc
Confidence            99999999998664  4542 56689999999999999999999999999999999999984    8999999999998 


Q ss_pred             ---CHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 017085          333 ---HVERRLTMGKRGYERVKEIFQEHHMAERI  361 (377)
Q Consensus       333 ---~~~~~~~~~~~~~~~~~~~f~~~~~~~~~  361 (377)
                         +.+.+.++.+++++.  +...|+..=++.
T Consensus       406 fp~~a~~l~~lkkn~~e~--~e~RW~~~W~~~  435 (444)
T KOG2941|consen  406 FPDNADELNQLKKNLREE--QELRWDESWERT  435 (444)
T ss_pred             CCCCHHHHHHHHHhhHHH--HhhhHHHHHHHh
Confidence               888999999999885  345666554443

>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences

Probab=99.72  E-value=2.5e-15  Score=143.83  Aligned_cols=189  Identities=15%  Similarity=0.146  Sum_probs=147.6

Q ss_pred             CCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccH---HHHHHHHHHHhcCCCCcEE
Q 017085          173 VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK---FESELRNYVMQKKIQDRVH  249 (377)
Q Consensus       173 ~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~---~~~~l~~~~~~~~~~~~v~  249 (377)
                      ++++.++++|++|+..+||.++++..+.++.+.+.+.   ..+++|++.|.+.|.+..   +.+.+.+.+++...+++|.
T Consensus       474 ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~---~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVv  550 (778)
T cd04299         474 LDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDP---ERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIV  550 (778)
T ss_pred             cCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCC---CCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEE
Confidence            5567789999999999999999999999887655431   146999999998765432   3334455555445567888


Q ss_pred             EecCc-CCH-HHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCC----------
Q 017085          250 FVNKT-LTV-APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGK----------  317 (377)
Q Consensus       250 ~~g~~-~~~-~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~----------  317 (377)
                      |+..- ..+ ..++++||+.++||+...|++|++-+-||..|.+-+++--|...|.. ++.|||.+....          
T Consensus       551 fle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~~~~~~~~d~  629 (778)
T cd04299         551 FLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDEYEDDEYQDA  629 (778)
T ss_pred             EEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCccccChhhcch
Confidence            87754 334 46779999999999988899999999999999999999888888887 788999998722          


Q ss_pred             CChhHHHHHHHHHhh----C------HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017085          318 EGITPLAKNIVKLAT----H------VERRLTMGKRGYERVKEIFQEHHMAERIAVVL  365 (377)
Q Consensus       318 ~~~~~la~~i~~l~~----~------~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~  365 (377)
                      .|.++|.+.|++.+-    +      |..+.+|.+++.+.+...|||++++++|.+-|
T Consensus       630 ~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~  687 (778)
T cd04299         630 EEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERF  687 (778)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence            136777777765332    2      66788888888877777999999999998743

Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

Probab=99.71  E-value=7.4e-15  Score=131.33  Aligned_cols=295  Identities=15%  Similarity=0.111  Sum_probs=169.8

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEE-----cc-------------------chhHHHhhhc
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS-----AK-------------------GQETINTALK   57 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-------------------~~~~~~~~~~   57 (377)
                      .++++|++.||+|.+++...+-+..        .+...|+++..     .+                   ....++++.+
T Consensus        20 a~a~~l~~~g~~v~~vg~~~~~e~~--------l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~k   91 (352)
T PRK12446         20 AIIPYLKEDNWDISYIGSHQGIEKT--------IIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMKGVMDAYVRIRKLK   91 (352)
T ss_pred             HHHHHHHhCCCEEEEEECCCccccc--------cCcccCCcEEEEeccCcCCCchHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            4789999999999999966543211        11112222211     00                   1224567899


Q ss_pred             ccEEEEcCchhhhHHH-HHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccC
Q 017085           58 ADLIVLNTAVAGKWLD-AVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKM  136 (377)
Q Consensus        58 ~Div~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~  136 (377)
                      ||+||++....+.... ++...++     |++.  |+... ......+...+.++.+++........          ++.
T Consensus        92 Pdvvi~~Ggy~s~p~~~aa~~~~~-----p~~i--~e~n~-~~g~~nr~~~~~a~~v~~~f~~~~~~----------~~~  153 (352)
T PRK12446         92 PDVIFSKGGFVSVPVVIGGWLNRV-----PVLL--HESDM-TPGLANKIALRFASKIFVTFEEAAKH----------LPK  153 (352)
T ss_pred             CCEEEecCchhhHHHHHHHHHcCC-----CEEE--ECCCC-CccHHHHHHHHhhCEEEEEccchhhh----------CCC
Confidence            9999999876543222 2222233     4443  43321 12233334446677776665443222          344


Q ss_pred             CCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCe
Q 017085          137 PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSV  216 (377)
Q Consensus       137 ~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~  216 (377)
                      +++.++.+++..+....         .+...++.++++++.++++.+|.-   .|...+-+++.++...+.      .++
T Consensus       154 ~k~~~tG~Pvr~~~~~~---------~~~~~~~~~~l~~~~~~iLv~GGS---~Ga~~in~~~~~~l~~l~------~~~  215 (352)
T PRK12446        154 EKVIYTGSPVREEVLKG---------NREKGLAFLGFSRKKPVITIMGGS---LGAKKINETVREALPELL------LKY  215 (352)
T ss_pred             CCeEEECCcCCcccccc---------cchHHHHhcCCCCCCcEEEEECCc---cchHHHHHHHHHHHHhhc------cCc
Confidence            67888888886654321         134456778888777777666643   333334444443333332      246


Q ss_pred             EEEE-EecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc-CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEE
Q 017085          217 HAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLG  294 (377)
Q Consensus       217 ~l~i-~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~-~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~  294 (377)
                      ++++ +|..     .+.+.+..    .   .++...++. +++.++|+.||+++.      -+.++++.|++++|+|.|.
T Consensus       216 ~vv~~~G~~-----~~~~~~~~----~---~~~~~~~f~~~~m~~~~~~adlvIs------r~G~~t~~E~~~~g~P~I~  277 (352)
T PRK12446        216 QIVHLCGKG-----NLDDSLQN----K---EGYRQFEYVHGELPDILAITDFVIS------RAGSNAIFEFLTLQKPMLL  277 (352)
T ss_pred             EEEEEeCCc-----hHHHHHhh----c---CCcEEecchhhhHHHHHHhCCEEEE------CCChhHHHHHHHcCCCEEE
Confidence            6654 4543     22222211    1   134556777 789999999999994      3458899999999999998


Q ss_pred             eCCCC---------cccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017085          295 TAAGG---------TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL  365 (377)
Q Consensus       295 s~~~~---------~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~  365 (377)
                      .....         ..+.+.+.+.|..+...+.+++.+++++.++++|++.+.+   ++     +++...+.++++.+++
T Consensus       278 iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~~---~~-----~~~~~~~aa~~i~~~i  349 (352)
T PRK12446        278 IPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYKT---AL-----KKYNGKEAIQTIIDHI  349 (352)
T ss_pred             EcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHHH---HH-----HHcCCCCHHHHHHHHH
Confidence            85431         2223334456666655444588999999999988875432   22     2245555566655554


Q ss_pred             H
Q 017085          366 K  366 (377)
Q Consensus       366 ~  366 (377)
                      .
T Consensus       350 ~  350 (352)
T PRK12446        350 S  350 (352)
T ss_pred             H
Confidence            3

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]

Probab=99.70  E-value=1.7e-14  Score=127.48  Aligned_cols=260  Identities=16%  Similarity=0.125  Sum_probs=166.2

Q ss_pred             hHHHhhhcccEEEEcCchhhhHHH-HHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhh
Q 017085           50 ETINTALKADLIVLNTAVAGKWLD-AVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRT  128 (377)
Q Consensus        50 ~~~~~~~~~Div~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~  128 (377)
                      ..++++.+||+|++.++..+.... +....++     |++.+..+...   +..++...+.++.+.+.....        
T Consensus        84 ~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~~i-----Pv~ihEqn~~~---G~ank~~~~~a~~V~~~f~~~--------  147 (357)
T COG0707          84 RKILKKLKPDVVIGTGGYVSGPVGIAAKLLGI-----PVIIHEQNAVP---GLANKILSKFAKKVASAFPKL--------  147 (357)
T ss_pred             HHHHHHcCCCEEEecCCccccHHHHHHHhCCC-----CEEEEecCCCc---chhHHHhHHhhceeeeccccc--------
Confidence            456688999999998876443332 3333334     55544443322   233333445555555555442        


Q ss_pred             hhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhh
Q 017085          129 RERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKE  208 (377)
Q Consensus       129 ~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~  208 (377)
                        .-+.+.+++.+..|++..++.. .+.        ...+.....  ++++++.+|.   ..|...+-+++.++...+. 
T Consensus       148 --~~~~~~~~~~~tG~Pvr~~~~~-~~~--------~~~~~~~~~--~~~~ilV~GG---S~Ga~~ln~~v~~~~~~l~-  210 (357)
T COG0707         148 --EAGVKPENVVVTGIPVRPEFEE-LPA--------AEVRKDGRL--DKKTILVTGG---SQGAKALNDLVPEALAKLA-  210 (357)
T ss_pred             --cccCCCCceEEecCcccHHhhc-cch--------hhhhhhccC--CCcEEEEECC---cchhHHHHHHHHHHHHHhh-
Confidence              2234556789999999887765 221        112222222  5666666663   3455555666655555443 


Q ss_pred             hcccCCCeEEEE-EecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHH
Q 017085          209 KKLEVPSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMA  287 (377)
Q Consensus       209 ~~~~~~~~~l~i-~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a  287 (377)
                           .+++++. +|.+      ..+++.....+++.   +.+.++.+++..+|++||+++.-      +.++++.|.++
T Consensus       211 -----~~~~v~~~~G~~------~~~~~~~~~~~~~~---~~v~~f~~dm~~~~~~ADLvIsR------aGa~Ti~E~~a  270 (357)
T COG0707         211 -----NRIQVIHQTGKN------DLEELKSAYNELGV---VRVLPFIDDMAALLAAADLVISR------AGALTIAELLA  270 (357)
T ss_pred             -----hCeEEEEEcCcc------hHHHHHHHHhhcCc---EEEeeHHhhHHHHHHhccEEEeC------CcccHHHHHHH
Confidence                 2466654 4544      35666666666654   88999999999999999999943      34789999999


Q ss_pred             cCCcEEEeCCCC--------cccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHH
Q 017085          288 FQLPVLGTAAGG--------TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAE  359 (377)
Q Consensus       288 ~g~PvI~s~~~~--------~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~  359 (377)
                      +|+|+|.-..+.        .+..+.+.+.|.+++..+.+++.+.+.|.+++++++.+.+|.+++++..     ....++
T Consensus       271 ~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~-----~p~aa~  345 (357)
T COG0707         271 LGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLG-----KPDAAE  345 (357)
T ss_pred             hCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-----CCCHHH
Confidence            999999876443        3344555667888887665689999999999999999999999987743     334444


Q ss_pred             HHHHHHHH
Q 017085          360 RIAVVLKE  367 (377)
Q Consensus       360 ~~~~~~~~  367 (377)
                      ++.+....
T Consensus       346 ~i~~~~~~  353 (357)
T COG0707         346 RIADLLLA  353 (357)
T ss_pred             HHHHHHHH
Confidence            44444433

>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.68  E-value=8e-14  Score=127.81  Aligned_cols=296  Identities=17%  Similarity=0.132  Sum_probs=178.3

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc-------cchhhhccccccceeeeeccchhhHhhhhh
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRT  128 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~-------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~  128 (377)
                      ..-|+|++|+..... +...++...+.  .++.+.+|-.++..       +.....+-+-.+|.|-..+...+..|....
T Consensus       140 ~~~D~VWVhDYhL~l-lP~~LR~~~~~--~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~  216 (474)
T PF00982_consen  140 RPGDLVWVHDYHLML-LPQMLRERGPD--ARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCC  216 (474)
T ss_dssp             -TT-EEEEESGGGTT-HHHHHHHTT----SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCcHHH-HHHHHHhhcCC--ceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHH
Confidence            456999999865443 33344444444  47888888765422       112223333477888888888887777766


Q ss_pred             hhhhhcc--C-----------CCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHH
Q 017085          129 RERLRIK--M-----------PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLF  195 (377)
Q Consensus       129 ~~~~~~~--~-----------~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~l  195 (377)
                      .+.+|+.  .           -++.+.|.|||++.+...............++++++  .+..+|+.+.|++..||+..-
T Consensus       217 ~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~--~~~~ii~gvDrld~~kGi~~k  294 (474)
T PF00982_consen  217 KRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFK--GKRKIIVGVDRLDYTKGIPEK  294 (474)
T ss_dssp             HHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHHTT--T-SEEEEEE--B-GGG-HHHH
T ss_pred             HHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcC--CCcEEEEEeccchhhcCHHHH
Confidence            6555432  1           237889999999988765544333444566777764  234788899999999999999


Q ss_pred             HHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccH----HHHHHHHHHHh----cCCCC--cEEEecC-c--CCHHHHHH
Q 017085          196 LHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK----FESELRNYVMQ----KKIQD--RVHFVNK-T--LTVAPYLA  262 (377)
Q Consensus       196 l~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~----~~~~l~~~~~~----~~~~~--~v~~~g~-~--~~~~~~~~  262 (377)
                      +.|+.++++..++.   ..++.|+-++.......+    +..++.+++.+    +|-.+  -|.++.. .  +++..+|+
T Consensus       295 l~Afe~fL~~~P~~---~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~  371 (474)
T PF00982_consen  295 LRAFERFLERYPEY---RGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYR  371 (474)
T ss_dssp             HHHHHHHHHH-GGG---TTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHH
T ss_pred             HHHHHHHHHhCcCc---cCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHH
Confidence            99999998866553   256888866653322222    34445444443    33222  2455543 2  78999999


Q ss_pred             hcCEEEecCCCCCCccchHHHHHHHcCCc----EEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhh-CHHHH
Q 017085          263 AIDVLVQNSQAWGECFGRITIEAMAFQLP----VLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERR  337 (377)
Q Consensus       263 ~adv~l~ps~~~~e~~~~~~~Ea~a~g~P----vI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~-~~~~~  337 (377)
                      .||+++.+|.  .+|+.++..|+.+|..+    +|.|...|..+.+.+  ..++++|.|  ++++|++|.++++ .++++
T Consensus       372 ~aDv~lvTsl--rDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~--~al~VNP~d--~~~~A~ai~~AL~M~~~Er  445 (474)
T PF00982_consen  372 AADVALVTSL--RDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSE--AALLVNPWD--IEEVADAIHEALTMPPEER  445 (474)
T ss_dssp             H-SEEEE--S--SBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TT--S-EEE-TT---HHHHHHHHHHHHT--HHHH
T ss_pred             hhhhEEecch--hhccCCcceEEEEEecCCCCceEeeccCCHHHHcCC--ccEEECCCC--hHHHHHHHHHHHcCCHHHH
Confidence            9999999999  99999999999999876    788888888887732  348999998  9999999999999 66667


Q ss_pred             HHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 017085          338 LTMGKRGYERVKEIFQEHHMAERIAVVLK  366 (377)
Q Consensus       338 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  366 (377)
                      +...+..++.+ ..++...+++.+.+-++
T Consensus       446 ~~r~~~~~~~v-~~~~~~~W~~~~l~~L~  473 (474)
T PF00982_consen  446 KERHARLREYV-REHDVQWWAESFLRDLK  473 (474)
T ss_dssp             HHHHHHHHHHH-HHT-HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh-HhCCHHHHHHHHHHHhh
Confidence            77777777766 45899999988876554

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.

>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3

Probab=99.66  E-value=2.2e-14  Score=130.47  Aligned_cols=257  Identities=17%  Similarity=0.192  Sum_probs=147.8

Q ss_pred             cccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhh-hhhhhhhHHH----HHHHh----CCC-CCC
Q 017085          108 PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAED-NVAKRVLREH----VRESL----GVR-NED  177 (377)
Q Consensus       108 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~-~~~~~~~~~~----~r~~~----~~~-~~~  177 (377)
                      ..+|.+.++|+.++.....-    ++-  ..=.|+|||++.+.+..... .......|+.    ++..+    .++ ++.
T Consensus       220 ~~AdvFTTVSeITa~Ea~~L----L~r--~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~t  293 (633)
T PF05693_consen  220 HYADVFTTVSEITAKEAEHL----LKR--KPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDKT  293 (633)
T ss_dssp             HHSSEEEESSHHHHHHHHHH----HSS----SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGGE
T ss_pred             HhcCeeeehhhhHHHHHHHH----hCC--CCCEEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccce
Confidence            47788999999888766642    222  23478999999887654321 1000111222    23222    233 345


Q ss_pred             eEEEEeccc-cccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCc-----------------------------
Q 017085          178 LLFAIINSV-SRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA-----------------------------  227 (377)
Q Consensus       178 ~~i~~~G~~-~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~-----------------------------  227 (377)
                      +.|...||. -..||+|.+|+|+.+|...|+..+.+..=+-|+|+-.....                             
T Consensus       294 l~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~  373 (633)
T PF05693_consen  294 LYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKR  373 (633)
T ss_dssp             EEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence            777788998 45899999999999998888764311111334444332210                             


Q ss_pred             -----------------ccH----------------------------HHHHHHHHHHhcCCC----C--cEEEecC---
Q 017085          228 -----------------QTK----------------------------FESELRNYVMQKKIQ----D--RVHFVNK---  253 (377)
Q Consensus       228 -----------------~~~----------------------------~~~~l~~~~~~~~~~----~--~v~~~g~---  253 (377)
                                       .+.                            ..+.+...++++++.    +  +|+|.+.   
T Consensus       374 ~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL~  453 (633)
T PF05693_consen  374 LFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYLS  453 (633)
T ss_dssp             HHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S---
T ss_pred             HHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeecccc
Confidence                             000                            002222233333332    1  3566652   


Q ss_pred             ----c--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceec-----Ccceeeec-CCCCCh-
Q 017085          254 ----T--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN-----GTTGLLHP-VGKEGI-  320 (377)
Q Consensus       254 ----~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~-----~~~g~~~~-~~~~~~-  320 (377)
                          .  -+..+++..||+.|+||+  +|++|.+.+|+.++|+|.|+|+..|+..++.+     ...|+.+- -.+.+. 
T Consensus       454 ~~dgif~l~Y~dfv~GcdLgvFPSY--YEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~  531 (633)
T PF05693_consen  454 GTDGIFNLDYYDFVRGCDLGVFPSY--YEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYD  531 (633)
T ss_dssp             TTSSSS-S-HHHHHHHSSEEEE--S--SBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HH
T ss_pred             CCCCCCCCCHHHHhccCceeeeccc--cccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHH
Confidence                1  568899999999999999  99999999999999999999999887766543     23565543 222234 


Q ss_pred             ---hHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccc
Q 017085          321 ---TPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSK  373 (377)
Q Consensus       321 ---~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~  373 (377)
                         +++++.|..... ++..+..++.++.+ +.+.++|+.+...|.+.|..++.+..
T Consensus       532 e~v~~la~~l~~f~~~~~rqri~~Rn~ae~-LS~~~dW~~~~~yY~~Ay~~AL~~a~  587 (633)
T PF05693_consen  532 ESVNQLADFLYKFCQLSRRQRIIQRNRAER-LSDLADWKNFGKYYEKAYDLALRRAY  587 (633)
T ss_dssp             HHHHHHHHHHHHHHT--HHHHHHHHHHHHH-HGGGGBHHHHCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHhcC
Confidence               455555555555 56667777777755 56789999999999999998876543

Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.

>PRK10117 trehalose-6-phosphate synthase; Provisional

Probab=99.66  E-value=1.1e-13  Score=125.21  Aligned_cols=295  Identities=11%  Similarity=0.040  Sum_probs=200.8

Q ss_pred             cccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc-------cchhhhccccccceeeeeccchhhHhhhhhh
Q 017085           57 KADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTR  129 (377)
Q Consensus        57 ~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~-------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  129 (377)
                      .-|+|++|+.-... +...++...+.  .++.+.+|-.++..       +.....+-+-.+|.+-..+...+..|.+...
T Consensus       123 ~~D~VWVHDYhL~l-lp~~LR~~~~~--~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~  199 (474)
T PRK10117        123 DDDIIWIHDYHLLP-FASELRKRGVN--NRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLS  199 (474)
T ss_pred             CCCEEEEeccHhhH-HHHHHHHhCCC--CcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHH
Confidence            34899999864332 22333333333  37888888655422       1122223334666677777766666665544


Q ss_pred             hhhhccC------------CCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHH
Q 017085          130 ERLRIKM------------PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLH  197 (377)
Q Consensus       130 ~~~~~~~------------~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~  197 (377)
                      +.+|+..            -++.+.|.|||++.|....... .......+++.++   +..+|+.+.|++..||+..=+.
T Consensus       200 ~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~---~~~lilgVDRLDytKGi~~rl~  275 (474)
T PRK10117        200 NLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELK---NVQNIFSVERLDYSKGLPERFL  275 (474)
T ss_pred             HHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcC---CCeEEEEecccccccCHHHHHH
Confidence            3333211            2478899999999887654322 2223455676664   4667888999999999999999


Q ss_pred             HHHHHHHHHhhhcccCCCeEEEEEecCCCcc----cHHHHHHHHHHHhc----CCCC--cEEEecCc---CCHHHHHHhc
Q 017085          198 SFYESLELIKEKKLEVPSVHAVIIGSDMNAQ----TKFESELRNYVMQK----KIQD--RVHFVNKT---LTVAPYLAAI  264 (377)
Q Consensus       198 a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~----~~~~~~l~~~~~~~----~~~~--~v~~~g~~---~~~~~~~~~a  264 (377)
                      |++.+++...+.   ..++.|+-+...+-.+    ..+..++.+.+.+.    |-.+  -|+++...   +++..+|+.|
T Consensus       276 Afe~fL~~~Pe~---~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~A  352 (474)
T PRK10117        276 AYEALLEKYPQH---HGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS  352 (474)
T ss_pred             HHHHHHHhChhh---cCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhc
Confidence            999988755543   2567777665433222    12344455544442    2222  14444432   7889999999


Q ss_pred             CEEEecCCCCCCccchHHHHHHHcCC-----cEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhh-CHHHHH
Q 017085          265 DVLVQNSQAWGECFGRITIEAMAFQL-----PVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERRL  338 (377)
Q Consensus       265 dv~l~ps~~~~e~~~~~~~Ea~a~g~-----PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~-~~~~~~  338 (377)
                      |+++.++.  .+|+.++..|+.+|..     ++|.|...|.++.+.   ..++++|.|  .+++|++|.+.++ .++++.
T Consensus       353 Dv~lVTpl--RDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~---~AllVNP~d--~~~~A~Ai~~AL~Mp~~Er~  425 (474)
T PRK10117        353 DVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYD--RDEVAAALDRALTMPLAERI  425 (474)
T ss_pred             cEEEeccc--ccccccccchheeeecCCCCccEEEecccchHHHhC---CCeEECCCC--HHHHHHHHHHHHcCCHHHHH
Confidence            99999999  9999999999999976     388899888888773   368999998  9999999999999 566676


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 017085          339 TMGKRGYERVKEIFQEHHMAERIAVVLKEVL  369 (377)
Q Consensus       339 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  369 (377)
                      +..+..++.+ ..++...+++.+.+-+..+.
T Consensus       426 ~R~~~l~~~v-~~~dv~~W~~~fL~~L~~~~  455 (474)
T PRK10117        426 SRHAEMLDVI-VKNDINHWQECFISDLKQIV  455 (474)
T ss_pred             HHHHHHHHHh-hhCCHHHHHHHHHHHHHHhh
Confidence            6667777766 45899999999998777654

>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1

Probab=99.59  E-value=8.8e-15  Score=104.58  Aligned_cols=92  Identities=27%  Similarity=0.263  Sum_probs=85.3

Q ss_pred             EEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHH
Q 017085          266 VLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGY  345 (377)
Q Consensus       266 v~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~  345 (377)
                      ++|.|+.  ..+++..++|+||||+|+|+++.+++.+++.++..++.++  +  ++++.+++..+++|++.+++++++++
T Consensus         1 i~Ln~~~--~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~--~~el~~~i~~ll~~~~~~~~ia~~a~   74 (92)
T PF13524_consen    1 INLNPSR--SDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--D--PEELAEKIEYLLENPEERRRIAKNAR   74 (92)
T ss_pred             CEeeCCC--CCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--C--HHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence            3577888  7899999999999999999999999999999888888887  4  99999999999999999999999999


Q ss_pred             HHHHHhcCHHHHHHHHHH
Q 017085          346 ERVKEIFQEHHMAERIAV  363 (377)
Q Consensus       346 ~~~~~~f~~~~~~~~~~~  363 (377)
                      +.+.++|+|+..++++.+
T Consensus        75 ~~v~~~~t~~~~~~~il~   92 (92)
T PF13524_consen   75 ERVLKRHTWEHRAEQILE   92 (92)
T ss_pred             HHHHHhCCHHHHHHHHHC
Confidence            999999999999998863

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.58  E-value=3.3e-12  Score=125.06  Aligned_cols=296  Identities=10%  Similarity=0.059  Sum_probs=201.4

Q ss_pred             cEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc-------cchhhhccccccceeeeeccchhhHhhhhhhhh
Q 017085           59 DLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRER  131 (377)
Q Consensus        59 Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~-------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~  131 (377)
                      |+|++|+..... +...++...+.  .++.+.+|-.++..       +.....+-+-.+|.|-..+...+..|.....+.
T Consensus       203 d~VWVhDYhL~l-lP~~LR~~~~~--~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~  279 (854)
T PLN02205        203 DFVWIHDYHLMV-LPTFLRKRFNR--VKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRM  279 (854)
T ss_pred             CEEEEeCchhhH-HHHHHHhhCCC--CcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHH
Confidence            899999865433 23333334444  37888888765432       122233334477778888887777777665555


Q ss_pred             hhccC---------------CCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHH
Q 017085          132 LRIKM---------------PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFL  196 (377)
Q Consensus       132 ~~~~~---------------~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll  196 (377)
                      +|+..               -++.+.|.|||++.+..............+++++++- +++.+|+.+.|++..||+..=+
T Consensus       280 lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~ilgVDrlD~~KGi~~kl  358 (854)
T PLN02205        280 LGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCD-QDRIMLLGVDDMDIFKGISLKL  358 (854)
T ss_pred             hCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhcc-CCCEEEEEccCcccccCHHHHH
Confidence            54422               1367899999999886654433333344567777653 3567888999999999999999


Q ss_pred             HHHHHHHHHHhhhcccCCCeEEEEEecCCCcc----cHHHHHHHHHHHh----cCCCC--cEEEecCc---CCHHHHHHh
Q 017085          197 HSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ----TKFESELRNYVMQ----KKIQD--RVHFVNKT---LTVAPYLAA  263 (377)
Q Consensus       197 ~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~----~~~~~~l~~~~~~----~~~~~--~v~~~g~~---~~~~~~~~~  263 (377)
                      .|++++++..++.   ..++.|+-+.......    ..+..++.+.+.+    +|-.+  -|+++...   +++.++|+.
T Consensus       359 ~A~e~~L~~~P~~---~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~  435 (854)
T PLN02205        359 LAMEQLLMQHPEW---QGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVV  435 (854)
T ss_pred             HHHHHHHHhCccc---cCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHh
Confidence            9999987743321   1345676555432211    1233444444443    23211  25555432   789999999


Q ss_pred             cCEEEecCCCCCCccchHHHHHHHcCC-------------------cEEEeCCCCcccceecCcceeeecCCCCChhHHH
Q 017085          264 IDVLVQNSQAWGECFGRITIEAMAFQL-------------------PVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLA  324 (377)
Q Consensus       264 adv~l~ps~~~~e~~~~~~~Ea~a~g~-------------------PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la  324 (377)
                      ||+++.++.  .+|+.++..|+.+|..                   .+|.|...|....+.   ..++++|.|  ++++|
T Consensus       436 ADv~lVT~l--RDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L~---~Ai~VNP~d--~~~~a  508 (854)
T PLN02205        436 AECCLVTAV--RDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSLS---GAIRVNPWN--IDAVA  508 (854)
T ss_pred             ccEEEeccc--cccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHhC---cCeEECCCC--HHHHH
Confidence            999999999  9999999999999864                   377888777776662   368999998  99999


Q ss_pred             HHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 017085          325 KNIVKLAT-HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVL  369 (377)
Q Consensus       325 ~~i~~l~~-~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  369 (377)
                      ++|.+.++ .+++++...+..++++ ..++...+++.+..-++++.
T Consensus       509 ~ai~~AL~m~~~Er~~R~~~~~~~v-~~~d~~~W~~~fl~~l~~~~  553 (854)
T PLN02205        509 DAMDSALEMAEPEKQLRHEKHYRYV-STHDVGYWARSFLQDLERTC  553 (854)
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHHHHH
Confidence            99999999 5555665566667766 55899999999888776653

>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]

Probab=99.58  E-value=4.5e-12  Score=114.30  Aligned_cols=296  Identities=15%  Similarity=0.122  Sum_probs=202.0

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc-------cchhhhccccccceeeeeccchhhHhhhhh
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRT  128 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~-------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~  128 (377)
                      ..=|+|++|+.... .+...++..++..  ++.+..|-.++..       +......-+-.+|.+-..+...+..|....
T Consensus       146 ~~gDiIWVhDYhL~-L~P~mlR~~~~~~--~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~  222 (486)
T COG0380         146 EPGDIIWVHDYHLL-LVPQMLRERIPDA--KIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLC  222 (486)
T ss_pred             CCCCEEEEEechhh-hhHHHHHHhCCCc--eEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHH
Confidence            34499999975433 3444555566654  7888888655421       112222333466667777777766665554


Q ss_pred             hhhhh-------------ccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHH
Q 017085          129 RERLR-------------IKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLF  195 (377)
Q Consensus       129 ~~~~~-------------~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~l  195 (377)
                      .+..+             -...++..+|.|+|+..+.........+..-.++++.++-  +..+|+.+.|++.-||+..=
T Consensus       223 ~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~--~~kiivgvDRlDy~kGi~~r  300 (486)
T COG0380         223 SRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGR--NKKLIVGVDRLDYSKGIPQR  300 (486)
T ss_pred             HHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcC--CceEEEEehhcccccCcHHH
Confidence            44332             1124678899999999887655443332334555555542  36778889999999999999


Q ss_pred             HHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccH----HHHHHHHHHHh----cCCCC--cEEEecCc---CCHHHHHH
Q 017085          196 LHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK----FESELRNYVMQ----KKIQD--RVHFVNKT---LTVAPYLA  262 (377)
Q Consensus       196 l~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~----~~~~l~~~~~~----~~~~~--~v~~~g~~---~~~~~~~~  262 (377)
                      +.|+.++++...+.   ..++.++-++..+..+-+    +..+++..+.+    +|-.+  -|+++-..   +++..+|.
T Consensus       301 l~Afe~lL~~~Pe~---~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~  377 (486)
T COG0380         301 LLAFERLLEEYPEW---RGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYR  377 (486)
T ss_pred             HHHHHHHHHhChhh---hCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHh
Confidence            99999988755543   256777767665443323    23333333333    22211  24444432   78999999


Q ss_pred             hcCEEEecCCCCCCccchHHHHHHHcC----CcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhh-CHHHH
Q 017085          263 AIDVLVQNSQAWGECFGRITIEAMAFQ----LPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERR  337 (377)
Q Consensus       263 ~adv~l~ps~~~~e~~~~~~~Ea~a~g----~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~-~~~~~  337 (377)
                      .||+++.++.  .+|+.++..|+.+|.    -|.|-|...|.+..+.+   .++++|.|  .++++++|.+.|+ .++++
T Consensus       378 ~aDv~lVtpl--rDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---AliVNP~d--~~~va~ai~~AL~m~~eEr  450 (486)
T COG0380         378 AADVMLVTPL--RDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---ALIVNPWD--TKEVADAIKRALTMSLEER  450 (486)
T ss_pred             hhceeeeccc--cccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---CEeECCCC--hHHHHHHHHHHhcCCHHHH
Confidence            9999999999  999999999999985    47888988887777743   69999998  9999999999999 66777


Q ss_pred             HHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 017085          338 LTMGKRGYERVKEIFQEHHMAERIAVVLKE  367 (377)
Q Consensus       338 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~  367 (377)
                      ++.-+..++.+. .++...+++.+..-+..
T Consensus       451 ~~r~~~~~~~v~-~~d~~~W~~~fl~~la~  479 (486)
T COG0380         451 KERHEKLLKQVL-THDVARWANSFLDDLAQ  479 (486)
T ss_pred             HHHHHHHHHHHH-hhhHHHHHHHHHHHHHh
Confidence            777777777664 48999999887776654

>TIGR02919 accessory Sec system glycosyltransferase GtfB

Probab=99.57  E-value=6.2e-13  Score=120.95  Aligned_cols=185  Identities=14%  Similarity=0.139  Sum_probs=136.7

Q ss_pred             cccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEecccc
Q 017085          108 PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS  187 (377)
Q Consensus       108 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~  187 (377)
                      .+.+.+++.+....+.+..++.     +..++.++|-|+-.. +  ....                 .....+++++.  
T Consensus       238 ~~~~~iIv~T~~q~~di~~r~~-----~~~~~~~ip~g~i~~-~--~~~~-----------------r~~~~~l~~t~--  290 (438)
T TIGR02919       238 TRNKKIIIPNKNEYEKIKELLD-----NEYQEQISQLGYLYP-F--KKDN-----------------KYRKQALILTN--  290 (438)
T ss_pred             cccCeEEeCCHHHHHHHHHHhC-----cccCceEEEEEEEEe-e--cccc-----------------CCcccEEEECC--
Confidence            7888999988776666665332     245677888776522 1  1100                 12234455561  


Q ss_pred             ccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcC-CHHHHHHhcCE
Q 017085          188 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL-TVAPYLAAIDV  266 (377)
Q Consensus       188 ~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~-~~~~~~~~adv  266 (377)
                           +..|+++..|.+.       .|+++|.| |.+.+    ...+|.++ .++  ++.+.+.|... ++.++|..||+
T Consensus       291 -----s~~I~~i~~Lv~~-------lPd~~f~I-ga~te----~s~kL~~L-~~y--~nvvly~~~~~~~l~~ly~~~dl  350 (438)
T TIGR02919       291 -----SDQIEHLEEIVQA-------LPDYHFHI-AALTE----MSSKLMSL-DKY--DNVKLYPNITTQKIQELYQTCDI  350 (438)
T ss_pred             -----HHHHHHHHHHHHh-------CCCcEEEE-EecCc----ccHHHHHH-Hhc--CCcEEECCcChHHHHHHHHhccE
Confidence                 8889999988774       49999999 77642    34677777 665  55666777664 89999999999


Q ss_pred             EEecCCCCCCccchHHHHHHHcCCcEEEeCCC-CcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHH
Q 017085          267 LVQNSQAWGECFGRITIEAMAFQLPVLGTAAG-GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGY  345 (377)
Q Consensus       267 ~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~-~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~  345 (377)
                      +|..|.  .|++++++.||+..|+|+++.+.. +..+++.+   |.+++.++  +++|+++|.+++++++..++.-..-+
T Consensus       351 yLdin~--~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~--~~~m~~~i~~lL~d~~~~~~~~~~q~  423 (438)
T TIGR02919       351 YLDINH--GNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNE--VDQLISKLKDLLNDPNQFRELLEQQR  423 (438)
T ss_pred             EEEccc--cccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCC--HHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            999999  999999999999999999999854 45566644   78999988  99999999999999976665544444


Q ss_pred             H
Q 017085          346 E  346 (377)
Q Consensus       346 ~  346 (377)
                      +
T Consensus       424 ~  424 (438)
T TIGR02919       424 E  424 (438)
T ss_pred             H
Confidence            3

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG

Probab=99.46  E-value=3.2e-11  Score=104.48  Aligned_cols=235  Identities=14%  Similarity=0.143  Sum_probs=138.0

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEccc----------hhHHHhhhcccEEEEcCch-hhh
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG----------QETINTALKADLIVLNTAV-AGK   70 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Div~~~~~~-~~~   70 (377)
                      .||++|+++|++|++++...+..       +...+...|+.++....          ...+++..+||+|++.+.. ...
T Consensus        22 ~LA~~l~~~g~~v~f~~~~~~~~-------~~~~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y~~~~~   94 (279)
T TIGR03590        22 TLARALHAQGAEVAFACKPLPGD-------LIDLLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHYGLDAD   94 (279)
T ss_pred             HHHHHHHHCCCEEEEEeCCCCHH-------HHHHHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCCCCCHH
Confidence            58999999999999999765431       23455667887765432          4456677799999998743 444


Q ss_pred             HHHHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhh-ccCCCeEEEEcCChhh
Q 017085           71 WLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLR-IKMPDTYVVHLGNSKE  149 (377)
Q Consensus        71 ~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~vi~ngi~~~  149 (377)
                      |...+... .     +.+..+-++..+.+         .+|.++..+.. .+...     ..+ .+....  +..|++.-
T Consensus        95 ~~~~~k~~-~-----~~l~~iDD~~~~~~---------~~D~vin~~~~-~~~~~-----y~~~~~~~~~--~l~G~~Y~  151 (279)
T TIGR03590        95 WEKLIKEF-G-----RKILVIDDLADRPH---------DCDLLLDQNLG-ADASD-----YQGLVPANCR--LLLGPSYA  151 (279)
T ss_pred             HHHHHHHh-C-----CeEEEEecCCCCCc---------CCCEEEeCCCC-cCHhH-----hcccCcCCCe--EEecchHH
Confidence            44433221 1     22233444321111         44655555543 22211     111 233333  33465332


Q ss_pred             hHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEE-EEecCCCcc
Q 017085          150 LMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAV-IIGSDMNAQ  228 (377)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~-i~G~~~~~~  228 (377)
                      ...+......    +....+    ++.+.++++.|..++.+....+++++.++.          .++++. ++|.+.+  
T Consensus       152 ~lr~eF~~~~----~~~~~~----~~~~~iLi~~GG~d~~~~~~~~l~~l~~~~----------~~~~i~vv~G~~~~--  211 (279)
T TIGR03590       152 LLREEFYQLA----TANKRR----KPLRRVLVSFGGADPDNLTLKLLSALAESQ----------INISITLVTGSSNP--  211 (279)
T ss_pred             hhhHHHHHhh----Hhhhcc----cccCeEEEEeCCcCCcCHHHHHHHHHhccc----------cCceEEEEECCCCc--
Confidence            2211110000    000111    022456777787777776677777776431          344443 6777642  


Q ss_pred             cHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC
Q 017085          229 TKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG  298 (377)
Q Consensus       229 ~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~  298 (377)
                        ..+++++.++..   .++.+.++++++.++|+.||+++.+       .|.++.|++++|+|+|+....
T Consensus       212 --~~~~l~~~~~~~---~~i~~~~~~~~m~~lm~~aDl~Is~-------~G~T~~E~~a~g~P~i~i~~~  269 (279)
T TIGR03590       212 --NLDELKKFAKEY---PNIILFIDVENMAELMNEADLAIGA-------AGSTSWERCCLGLPSLAICLA  269 (279)
T ss_pred             --CHHHHHHHHHhC---CCEEEEeCHHHHHHHHHHCCEEEEC-------CchHHHHHHHcCCCEEEEEec
Confidence              456677776653   4799999999999999999999963       368999999999999987653

This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]

Probab=99.46  E-value=6.7e-11  Score=103.53  Aligned_cols=278  Identities=12%  Similarity=0.120  Sum_probs=176.6

Q ss_pred             chhHHHhhhcccEEEEcCc--hhhhHHHHHhhcCCCccccceeEEeeeecc------cccchhhhccccccceeeeeccc
Q 017085           48 GQETINTALKADLIVLNTA--VAGKWLDAVLKEDVPRVLPNVLWWIHEMRG------HYFKLDYVKHLPLVAGAMIDSHV  119 (377)
Q Consensus        48 ~~~~~~~~~~~Div~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~------~~~~~~~~~~~~~~~~~~~~s~~  119 (377)
                      ..+.+++..+||++++...  ++..+ ..+...++     |.+.----...      ...+...+..++.++.+++.|+.
T Consensus       114 ~v~rFl~~~~P~l~Ii~EtElWPnli-~e~~~~~~-----p~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~  187 (419)
T COG1519         114 AVRRFLRKWRPKLLIIMETELWPNLI-NELKRRGI-----PLVLVNARLSDRSFARYAKLKFLARLLFKNIDLILAQSEE  187 (419)
T ss_pred             HHHHHHHhcCCCEEEEEeccccHHHH-HHHHHcCC-----CEEEEeeeechhhhHHHHHHHHHHHHHHHhcceeeecCHH
Confidence            4566777889999887642  33322 22222233     32221111111      12234455667899999999999


Q ss_pred             hhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHH
Q 017085          120 TAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSF  199 (377)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~  199 (377)
                      .++.+.     .+|..+  +.+..| +-.+.-.+    ..........|.+++.+  +.+++..+.  ....-+.+++++
T Consensus       188 D~~Rf~-----~LGa~~--v~v~GN-lKfd~~~~----~~~~~~~~~~r~~l~~~--r~v~iaaST--H~GEeei~l~~~  251 (419)
T COG1519         188 DAQRFR-----SLGAKP--VVVTGN-LKFDIEPP----PQLAAELAALRRQLGGH--RPVWVAAST--HEGEEEIILDAH  251 (419)
T ss_pred             HHHHHH-----hcCCcc--eEEecc-eeecCCCC----hhhHHHHHHHHHhcCCC--CceEEEecC--CCchHHHHHHHH
Confidence            988887     566544  666665 22221111    11122345677777664  556666664  223334588888


Q ss_pred             HHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCC------------cEEEecC-cCCHHHHHHhcCE
Q 017085          200 YESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQD------------RVHFVNK-TLTVAPYLAAIDV  266 (377)
Q Consensus       200 ~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~------------~v~~~g~-~~~~~~~~~~adv  266 (377)
                      +.+++       ++++..+++|-..+    +-.+.+.+++++.|+.-            .=+++|. ..+|..+|..+|+
T Consensus       252 ~~l~~-------~~~~~llIlVPRHp----ERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adi  320 (419)
T COG1519         252 QALKK-------QFPNLLLILVPRHP----ERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADI  320 (419)
T ss_pred             HHHHh-------hCCCceEEEecCCh----hhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccE
Confidence            87766       66899999998875    45678888888887641            1223333 3789999999999


Q ss_pred             EEecCCCCCCccchHHHHHHHcCCcEEEeC-CCCccc---ceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHH
Q 017085          267 LVQNSQAWGECFGRITIEAMAFQLPVLGTA-AGGTTE---IVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGK  342 (377)
Q Consensus       267 ~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~-~~~~~e---~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~  342 (377)
                      .++.... ..-.|..++|++++|+|||... .-...|   -+...+.|+.++.    .+.+++++..+++|++.+.++++
T Consensus       321 AFVGGSl-v~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~----~~~l~~~v~~l~~~~~~r~~~~~  395 (419)
T COG1519         321 AFVGGSL-VPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVED----ADLLAKAVELLLADEDKREAYGR  395 (419)
T ss_pred             EEECCcc-cCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEECC----HHHHHHHHHHhcCCHHHHHHHHH
Confidence            7765331 4456889999999999999764 233333   3434445666663    78899999999999999999999


Q ss_pred             HHHHHHHHhcCHHHHHHHHHHHHH
Q 017085          343 RGYERVKEIFQEHHMAERIAVVLK  366 (377)
Q Consensus       343 ~~~~~~~~~f~~~~~~~~~~~~~~  366 (377)
                      ++.+.+.+   .....+++.+.++
T Consensus       396 ~~~~~v~~---~~gal~r~l~~l~  416 (419)
T COG1519         396 AGLEFLAQ---NRGALARTLEALK  416 (419)
T ss_pred             HHHHHHHH---hhHHHHHHHHHhh
Confidence            99998865   3335555555443

>TIGR03492 conserved hypothetical protein

Probab=99.45  E-value=3.1e-11  Score=109.72  Aligned_cols=260  Identities=13%  Similarity=0.030  Sum_probs=152.6

Q ss_pred             HHhhh--cccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc--------------cchhh------hccc-c
Q 017085           52 INTAL--KADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY--------------FKLDY------VKHL-P  108 (377)
Q Consensus        52 ~~~~~--~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~--------------~~~~~------~~~~-~  108 (377)
                      ++++.  +||+|++.+........  ...++|    .+++..|+....+              +....      .+.. +
T Consensus        86 ~~~~~~~~p~~v~~~Gg~v~~~aA--~~~~~p----~~~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~p~e~n~l~~~  159 (396)
T TIGR03492        86 ALRKWAKKGDLIVAVGDIVPLLFA--WLSGKP----YAFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYLPWERWLMRSR  159 (396)
T ss_pred             HHHHHhhcCCEEEEECcHHHHHHH--HHcCCC----ceEEEeeccceeecCCCCCccchhhhccCCCccCHHHHHHhhch
Confidence            34556  99999999877632222  223443    3444445432110              01111      2333 6


Q ss_pred             ccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCC-eEEEEecccc
Q 017085          109 LVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNED-LLFAIINSVS  187 (377)
Q Consensus       109 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~i~~~G~~~  187 (377)
                      .++.+++......+++.+     .|   .++.++.|++-...... .        +      .+++++. .++++.|+-.
T Consensus       160 ~a~~v~~~~~~t~~~l~~-----~g---~k~~~vGnPv~d~l~~~-~--------~------~~l~~~~~~lllLpGSR~  216 (396)
T TIGR03492       160 RCLAVFVRDRLTARDLRR-----QG---VRASYLGNPMMDGLEPP-E--------R------KPLLTGRFRIALLPGSRP  216 (396)
T ss_pred             hhCEEeCCCHHHHHHHHH-----CC---CeEEEeCcCHHhcCccc-c--------c------cccCCCCCEEEEECCCCH
Confidence            777788888777777763     23   36888888874432210 0        0      0343443 4445555442


Q ss_pred             c--cchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCC--------------CcEEEe
Q 017085          188 R--GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ--------------DRVHFV  251 (377)
Q Consensus       188 ~--~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~--------------~~v~~~  251 (377)
                      +  .++...+++++..+.+       + +++.+++.-.+.    ...+.+++...+.++.              +++.+.
T Consensus       217 ae~~~~lp~~l~al~~L~~-------~-~~~~~v~~~~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~  284 (396)
T TIGR03492       217 PEAYRNLKLLLRALEALPD-------S-QPFVFLAAIVPS----LSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVL  284 (396)
T ss_pred             HHHHccHHHHHHHHHHHhh-------C-CCeEEEEEeCCC----CCHHHHHHHHHhcCceecCCccccchhhccCceEEE
Confidence            2  3456678888876633       2 577777654222    2345566666655543              236666


Q ss_pred             cCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCc---ccceecC----cceeeecCCCCChhHHH
Q 017085          252 NKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGT---TEIVVNG----TTGLLHPVGKEGITPLA  324 (377)
Q Consensus       252 g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~---~e~~~~~----~~g~~~~~~~~~~~~la  324 (377)
                      .+..++.++|+.||+++..|       |.+..|++++|+|+|.....+-   ..+.+..    +.+..+...+  .+.++
T Consensus       285 ~~~~~~~~~l~~ADlvI~rS-------Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~--~~~l~  355 (396)
T TIGR03492       285 LGRGAFAEILHWADLGIAMA-------GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKN--PEQAA  355 (396)
T ss_pred             echHhHHHHHHhCCEEEECc-------CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCC--HHHHH
Confidence            66678999999999999765       5566999999999999863321   1222220    2334444444  89999


Q ss_pred             HHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 017085          325 KNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERI  361 (377)
Q Consensus       325 ~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~  361 (377)
                      +++.++++|++.+.+|.+++++...+....+.+++.+
T Consensus       356 ~~l~~ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i  392 (396)
T TIGR03492       356 QVVRQLLADPELLERCRRNGQERMGPPGASARIAESI  392 (396)
T ss_pred             HHHHHHHcCHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence            9999999999988888755544333334444444433

This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.

>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.39  E-value=4.6e-10  Score=99.69  Aligned_cols=288  Identities=16%  Similarity=0.144  Sum_probs=168.6

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEE-----------------------ccchhHHHhhhcc
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS-----------------------AKGQETINTALKA   58 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~   58 (377)
                      +|+++|++++-++.++..+++.            +...|+..+.                       .......+...+|
T Consensus        16 ~Li~~Lk~~~p~~~~~GvGG~~------------M~~~G~~~l~d~~~lsvmG~~Evl~~l~~~~~~~~~~~~~~~~~~p   83 (373)
T PF02684_consen   16 RLIRALKARDPDIEFYGVGGPR------------MQAAGVESLFDMEELSVMGFVEVLKKLPKLKRLFRKLVERIKEEKP   83 (373)
T ss_pred             HHHHHHHhhCCCcEEEEEechH------------HHhCCCceecchHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            5788999988888888866542            1112332211                       1122333457999


Q ss_pred             cEEEEcCch--hhhHHHHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccC
Q 017085           59 DLIVLNTAV--AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKM  136 (377)
Q Consensus        59 Div~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~  136 (377)
                      |+|+.-+..  .......+...+.+   .|+++.+--..+.|-..+....-+..|.+++.-.+-.+++.+     .|   
T Consensus        84 d~vIlID~pgFNlrlak~lk~~~~~---~~viyYI~PqvWAWr~~R~~~i~~~~D~ll~ifPFE~~~y~~-----~g---  152 (373)
T PF02684_consen   84 DVVILIDYPGFNLRLAKKLKKRGIP---IKVIYYISPQVWAWRPGRAKKIKKYVDHLLVIFPFEPEFYKK-----HG---  152 (373)
T ss_pred             CEEEEeCCCCccHHHHHHHHHhCCC---ceEEEEECCceeeeCccHHHHHHHHHhheeECCcccHHHHhc-----cC---
Confidence            999988743  22222333333332   135555543323344445555557889999999999998884     34   


Q ss_pred             CCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCe-EEEEeccc-cc-cchhHHHHHHHHHHHHHHhhhcccC
Q 017085          137 PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDL-LFAIINSV-SR-GKGQDLFLHSFYESLELIKEKKLEV  213 (377)
Q Consensus       137 ~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~i~~~G~~-~~-~Kg~~~ll~a~~~l~~~l~~~~~~~  213 (377)
                      -++..+.|+.-... ...       ..+...++.+ ++++.+ +.+..|+= .+ .+....++++++.+.+       ++
T Consensus       153 ~~~~~VGHPl~d~~-~~~-------~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~-------~~  216 (373)
T PF02684_consen  153 VPVTYVGHPLLDEV-KPE-------PDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKK-------QR  216 (373)
T ss_pred             CCeEEECCcchhhh-ccC-------CCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHH-------hC
Confidence            34677777763322 111       1134556666 666554 45556632 11 2334555666665544       45


Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEE
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL  293 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI  293 (377)
                      +++++++.....    ...+.+.+.....+....+...  ..+-.+.|+.||+.+..|       |++.+|++.+|+|.|
T Consensus       217 p~l~fvvp~a~~----~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~m~~ad~al~~S-------GTaTLE~Al~g~P~V  283 (373)
T PF02684_consen  217 PDLQFVVPVAPE----VHEELIEEILAEYPPDVSIVII--EGESYDAMAAADAALAAS-------GTATLEAALLGVPMV  283 (373)
T ss_pred             CCeEEEEecCCH----HHHHHHHHHHHhhCCCCeEEEc--CCchHHHHHhCcchhhcC-------CHHHHHHHHhCCCEE
Confidence            899999877642    2333355555555443333332  357889999999998766       899999999999988


Q ss_pred             EeC-C----------------CCcccceecCcc--eeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHH
Q 017085          294 GTA-A----------------GGTTEIVVNGTT--GLLHPVGKEGITPLAKNIVKLATHVERRLTMGKR  343 (377)
Q Consensus       294 ~s~-~----------------~~~~e~~~~~~~--g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~  343 (377)
                      +.- .                -+++.++.+...  =++-+..+  ++.+++++..+++|++.+......
T Consensus       284 v~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~--~~~i~~~~~~ll~~~~~~~~~~~~  350 (373)
T PF02684_consen  284 VAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDAT--PENIAAELLELLENPEKRKKQKEL  350 (373)
T ss_pred             EEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCC--HHHHHHHHHHHhcCHHHHHHHHHH
Confidence            641 1                233333322110  01222334  899999999999998864444333

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process

>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A

Probab=99.38  E-value=6.3e-11  Score=107.03  Aligned_cols=182  Identities=18%  Similarity=0.225  Sum_probs=123.3

Q ss_pred             HHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCC-
Q 017085          167 VRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ-  245 (377)
Q Consensus       167 ~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~-  245 (377)
                      .|+.+|++++.++|+.+.++  .|=-+..+++|.++++.       -|+.+|++.....    ...+.+++.+.+.|+. 
T Consensus       275 ~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~-------vP~S~L~L~~~~~----~~~~~l~~~~~~~Gv~~  341 (468)
T PF13844_consen  275 TRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKA-------VPNSRLWLLRFPA----SGEARLRRRFAAHGVDP  341 (468)
T ss_dssp             ETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHH-------STTEEEEEEETST----THHHHHHHHHHHTTS-G
T ss_pred             CHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHh-------CCCcEEEEeeCCH----HHHHHHHHHHHHcCCCh
Confidence            48899999999988887754  57788899999998774       4899998876543    2457888889999985 


Q ss_pred             CcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccce-----ec-CcceeeecCCC
Q 017085          246 DRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIV-----VN-GTTGLLHPVGK  317 (377)
Q Consensus       246 ~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~-----~~-~~~g~~~~~~~  317 (377)
                      +++.|.+..  ++....+..+|++|-+.   .-+.+++.+||+.+|+|||+-.......-+     .. |-.-+++.  +
T Consensus       342 ~Ri~f~~~~~~~ehl~~~~~~DI~LDT~---p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~--s  416 (468)
T PF13844_consen  342 DRIIFSPVAPREEHLRRYQLADICLDTF---PYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD--S  416 (468)
T ss_dssp             GGEEEEE---HHHHHHHGGG-SEEE--S---SS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S--S
T ss_pred             hhEEEcCCCCHHHHHHHhhhCCEEeeCC---CCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC--C
Confidence            789998864  45556778899999875   456689999999999999986533222211     11 11123333  2


Q ss_pred             CChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHH
Q 017085          318 EGITPLAKNIVKLATHVERRLTMGKRGYERVKE--IFQEHHMAERIAVVLKEV  368 (377)
Q Consensus       318 ~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~--~f~~~~~~~~~~~~~~~~  368 (377)
                        .+++.+.-.++.+|++.+.+++..-++...+  -|+...+++++++.|+++
T Consensus       417 --~~eYv~~Av~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m  467 (468)
T PF13844_consen  417 --EEEYVEIAVRLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM  467 (468)
T ss_dssp             --HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence              8999999999999999999999988876644  399999999999999875

>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]

Probab=99.37  E-value=5.8e-10  Score=96.69  Aligned_cols=256  Identities=16%  Similarity=0.147  Sum_probs=153.5

Q ss_pred             HHHhhhcccEEEEcCchh-hhHHHHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhh
Q 017085           51 TINTALKADLIVLNTAVA-GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTR  129 (377)
Q Consensus        51 ~~~~~~~~Div~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  129 (377)
                      +.+..++||++++-+... ..-+...++...|.  .|+++.+.-..+.|-..+.....+.+|.+.+.-.+-..++.    
T Consensus        79 ~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~p~--i~iihYV~PsVWAWr~~Ra~~i~~~~D~lLailPFE~~~y~----  152 (381)
T COG0763          79 RYILANKPDVLILIDSPDFNLRVAKKLRKAGPK--IKIIHYVSPSVWAWRPKRAVKIAKYVDHLLAILPFEPAFYD----  152 (381)
T ss_pred             HHHHhcCCCEEEEeCCCCCchHHHHHHHHhCCC--CCeEEEECcceeeechhhHHHHHHHhhHeeeecCCCHHHHH----
Confidence            334568999999987542 22222222222322  24444444332333344445566889999999999988887    


Q ss_pred             hhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCe-EEEEeccccccchhHHHHHHHHHHHHHHhh
Q 017085          130 ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDL-LFAIINSVSRGKGQDLFLHSFYESLELIKE  208 (377)
Q Consensus       130 ~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~  208 (377)
                       ++|.+   ++.|.++.-.... .       ..+++.+|++++++.+.. +.+..|+  .+--+..++..|.+..+.|++
T Consensus       153 -k~g~~---~~yVGHpl~d~i~-~-------~~~r~~ar~~l~~~~~~~~lalLPGS--R~sEI~rl~~~f~~a~~~l~~  218 (381)
T COG0763         153 -KFGLP---CTYVGHPLADEIP-L-------LPDREAAREKLGIDADEKTLALLPGS--RRSEIRRLLPPFVQAAQELKA  218 (381)
T ss_pred             -hcCCC---eEEeCChhhhhcc-c-------cccHHHHHHHhCCCCCCCeEEEecCC--cHHHHHHHHHHHHHHHHHHHh
Confidence             44543   6667666533221 1       122566999999987664 4455663  334456666666666556665


Q ss_pred             hcccCCCeEEEEEecCCCcccHHHHHHHHHH-HhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHH
Q 017085          209 KKLEVPSVHAVIIGSDMNAQTKFESELRNYV-MQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMA  287 (377)
Q Consensus       209 ~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~-~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a  287 (377)
                         ++++.++++--..     +..+.++... +.......+++.+  .+-.+.|.+||+.+..|       |++.+|++.
T Consensus       219 ---~~~~~~~vlp~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~a~~~aD~al~aS-------GT~tLE~aL  281 (381)
T COG0763         219 ---RYPDLKFVLPLVN-----AKYRRIIEEALKWEVAGLSLILID--GEKRKAFAAADAALAAS-------GTATLEAAL  281 (381)
T ss_pred             ---hCCCceEEEecCc-----HHHHHHHHHHhhccccCceEEecC--chHHHHHHHhhHHHHhc-------cHHHHHHHH
Confidence               4589999987775     2334443333 3322212333333  46778999999998766       899999999


Q ss_pred             cCCcEEEe-----------------CCCCcccceecCcc--eeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHH
Q 017085          288 FQLPVLGT-----------------AAGGTTEIVVNGTT--GLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGY  345 (377)
Q Consensus       288 ~g~PvI~s-----------------~~~~~~e~~~~~~~--g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~  345 (377)
                      +|+|.|++                 ..-+++.++.+...  -++-+...  ++.++.++..+++|...+.++.+...
T Consensus       282 ~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~--pe~la~~l~~ll~~~~~~~~~~~~~~  356 (381)
T COG0763         282 AGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCT--PENLARALEELLLNGDRREALKEKFR  356 (381)
T ss_pred             hCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcC--HHHHHHHHHHHhcChHhHHHHHHHHH
Confidence            99999975                 12234444432110  01112233  89999999999999865555555433

>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A

Probab=99.35  E-value=4.6e-13  Score=108.32  Aligned_cols=140  Identities=12%  Similarity=-0.027  Sum_probs=77.1

Q ss_pred             CcHhhHHHhcCceEEEEEecCCCcchhHh-hhhhhh---hcc-cCceEEEccchhHHHhhhcccEEEEcCchhhhHHHHH
Q 017085            1 MELAFLLRGVGTKVNWITIQKPSEEDEVI-YSLEHK---MWD-RGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAV   75 (377)
Q Consensus         1 ~~la~~L~~~G~eV~v~~~~~~~~~~~~~-~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~   75 (377)
                      ++|+++|+++||||++++........... ......   ... .............++++.+||+||+|......+....
T Consensus        19 ~~l~~~l~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~DiVh~~~~~~~~~~~~~   98 (177)
T PF13439_consen   19 LNLARALAKRGHEVTVVSPGVKDPIEEELVKIFVKIPYPIRKRFLRSFFFMRRLRRLIKKEKPDIVHIHGPPAFWIALLA   98 (177)
T ss_dssp             HHHHHHHHHTT-EEEEEESS-TTS-SSTEEEE---TT-SSTSS--HHHHHHHHHHHHHHHHT-SEEECCTTHCCCHHHHH
T ss_pred             HHHHHHHHHCCCEEEEEEcCCCccchhhccceeeeeecccccccchhHHHHHHHHHHHHHcCCCeEEecccchhHHHHHh
Confidence            37899999999999999976554322110 000000   000 0000011224455667789999999986655444333


Q ss_pred             hhcCCCccccceeEEeeeeccc--------c-----cchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEE
Q 017085           76 LKEDVPRVLPNVLWWIHEMRGH--------Y-----FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVV  142 (377)
Q Consensus        76 ~~~~~~~~~~~~v~~~h~~~~~--------~-----~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi  142 (377)
                      ..      ..|.+++.|+....        .     .........+.+|.++++|+.+++.+.     ++|+++.++.||
T Consensus        99 ~~------~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~-----~~~~~~~ki~vI  167 (177)
T PF13439_consen   99 CR------KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELI-----KFGIPPEKIHVI  167 (177)
T ss_dssp             HH------CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHH-----HHT--SS-EEE-
T ss_pred             cc------CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHH-----HhCCcccCCEEE
Confidence            33      25899999987620        0     011122334789999999999988877     467888999999


Q ss_pred             EcCChhhhH
Q 017085          143 HLGNSKELM  151 (377)
Q Consensus       143 ~ngi~~~~~  151 (377)
                      |||+|.+.|
T Consensus       168 ~ngid~~~F  176 (177)
T PF13439_consen  168 YNGIDTDRF  176 (177)
T ss_dssp             ---B-CCCH
T ss_pred             ECCccHHHc
Confidence            999999876

>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing

Probab=99.30  E-value=1.8e-09  Score=97.29  Aligned_cols=270  Identities=14%  Similarity=0.156  Sum_probs=146.5

Q ss_pred             chhHHHhhhcccEEEEcCchhhhHHH--HHhhcCCCccccceeEEeeeec-c-cccchhhhcccc-ccceeeeeccchhh
Q 017085           48 GQETINTALKADLIVLNTAVAGKWLD--AVLKEDVPRVLPNVLWWIHEMR-G-HYFKLDYVKHLP-LVAGAMIDSHVTAE  122 (377)
Q Consensus        48 ~~~~~~~~~~~Div~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~h~~~-~-~~~~~~~~~~~~-~~~~~~~~s~~~~~  122 (377)
                      .+..++.+.+||+|++++........  ++....+     |++ ++|+-. + .......+.... .++..+++++...+
T Consensus        84 ~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~~~I-----Pv~-HveaG~rs~~~~eE~~r~~i~~la~l~f~~t~~~~~  157 (365)
T TIGR03568        84 GFSDAFERLKPDLVVVLGDRFEMLAAAIAAALLNI-----PIA-HIHGGEVTEGAIDESIRHAITKLSHLHFVATEEYRQ  157 (365)
T ss_pred             HHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHhCC-----cEE-EEECCccCCCCchHHHHHHHHHHHhhccCCCHHHHH
Confidence            34556678999999999855222222  2222334     333 344331 1 111111223333 33455566666666


Q ss_pred             HhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCC-CeEEEEecccc--ccchhHHHHHHH
Q 017085          123 YWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNE-DLLFAIINSVS--RGKGQDLFLHSF  199 (377)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~i~~~G~~~--~~Kg~~~ll~a~  199 (377)
                      .+.     +.|.++.++.++.|..-........      ..+..+.++++++.+ +++++..-+-.  .....+.+.+.+
T Consensus       158 ~L~-----~eg~~~~~i~~tG~~~iD~l~~~~~------~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li  226 (365)
T TIGR03568       158 RVI-----QMGEDPDRVFNVGSPGLDNILSLDL------LSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELL  226 (365)
T ss_pred             HHH-----HcCCCCCcEEEECCcHHHHHHhhhc------cCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHH
Confidence            555     4577778888888755333222111      124677888998643 45434333321  222233333333


Q ss_pred             HHHHHHHhhhcccCCCeEEEEEec-CCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCC
Q 017085          200 YESLELIKEKKLEVPSVHAVIIGS-DMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGE  276 (377)
Q Consensus       200 ~~l~~~l~~~~~~~~~~~l~i~G~-~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e  276 (377)
                      +.+.+    .+   .++  +++.. +.+......+.+.+....   .+++.+.++.  .++..+++.|++++-.|.    
T Consensus       227 ~~L~~----~~---~~~--~vi~P~~~p~~~~i~~~i~~~~~~---~~~v~l~~~l~~~~~l~Ll~~a~~vitdSS----  290 (365)
T TIGR03568       227 KALDE----LN---KNY--IFTYPNADAGSRIINEAIEEYVNE---HPNFRLFKSLGQERYLSLLKNADAVIGNSS----  290 (365)
T ss_pred             HHHHH----hc---cCC--EEEEeCCCCCchHHHHHHHHHhcC---CCCEEEECCCChHHHHHHHHhCCEEEEcCh----
Confidence            33322    11   234  33322 212221234444444221   3579999975  789999999999996553    


Q ss_pred             ccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHH
Q 017085          277 CFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHH  356 (377)
Q Consensus       277 ~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~  356 (377)
                        |. +.||.++|+|||+-  +.-+|.+..+.+.+.+. .+  .+++.+++.+++ +++.+..+..     ...-|-...
T Consensus       291 --gg-i~EA~~lg~Pvv~l--~~R~e~~~~g~nvl~vg-~~--~~~I~~a~~~~~-~~~~~~~~~~-----~~~pygdg~  356 (365)
T TIGR03568       291 --SG-IIEAPSFGVPTINI--GTRQKGRLRADSVIDVD-PD--KEEIVKAIEKLL-DPAFKKSLKN-----VKNPYGDGN  356 (365)
T ss_pred             --hH-HHhhhhcCCCEEee--cCCchhhhhcCeEEEeC-CC--HHHHHHHHHHHh-ChHHHHHHhh-----CCCCCCCCh
Confidence              33 38999999999954  45777776677777663 34  899999999854 4443332211     112355555


Q ss_pred             HHHHHHHH
Q 017085          357 MAERIAVV  364 (377)
Q Consensus       357 ~~~~~~~~  364 (377)
                      .++++.++
T Consensus       357 as~rI~~~  364 (365)
T TIGR03568       357 SSERIIEI  364 (365)
T ss_pred             HHHHHHHh
Confidence            66666553

This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.

>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length

Probab=99.28  E-value=1.1e-09  Score=95.95  Aligned_cols=264  Identities=16%  Similarity=0.125  Sum_probs=152.3

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEcc------------------chhHHHhhhcccEEEE
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK------------------GQETINTALKADLIVL   63 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~Div~~   63 (377)
                      +++++|.+.||||.|.+.+.+.        ....+...|++.....                  .+..+.++.+||++++
T Consensus        18 ~~I~eL~~~GheV~it~R~~~~--------~~~LL~~yg~~y~~iG~~g~~~~~Kl~~~~~R~~~l~~~~~~~~pDv~is   89 (335)
T PF04007_consen   18 NIIRELEKRGHEVLITARDKDE--------TEELLDLYGIDYIVIGKHGDSLYGKLLESIERQYKLLKLIKKFKPDVAIS   89 (335)
T ss_pred             HHHHHHHhCCCEEEEEEeccch--------HHHHHHHcCCCeEEEcCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCEEEe
Confidence            4688999999999999976542        2333444555443211                  2234446689999999


Q ss_pred             cCchhhhHHHHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEE-
Q 017085           64 NTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVV-  142 (377)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi-  142 (377)
                      +++..+..+...+  ++     |.+.....-..   ....+..++.++.++++...-...+.     .+|..   -.+. 
T Consensus        90 ~~s~~a~~va~~l--gi-----P~I~f~D~e~a---~~~~~Lt~Pla~~i~~P~~~~~~~~~-----~~G~~---~~i~~  151 (335)
T PF04007_consen   90 FGSPEAARVAFGL--GI-----PSIVFNDTEHA---IAQNRLTLPLADVIITPEAIPKEFLK-----RFGAK---NQIRT  151 (335)
T ss_pred             cCcHHHHHHHHHh--CC-----CeEEEecCchh---hccceeehhcCCeeECCcccCHHHHH-----hcCCc---CCEEE
Confidence            8766544333322  33     55554442211   11233356788888888876655544     44532   2344 


Q ss_pred             EcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEecccccc-----chhHHHHHHHHHHHHHHhhhcccCCCeE
Q 017085          143 HLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRG-----KGQDLFLHSFYESLELIKEKKLEVPSVH  217 (377)
Q Consensus       143 ~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~-----Kg~~~ll~a~~~l~~~l~~~~~~~~~~~  217 (377)
                      ++|++...+-....+      ..++.+.+|+++++++++   |..+.     +|-..++   .++.+.|++.    .+. 
T Consensus       152 y~G~~E~ayl~~F~P------d~~vl~~lg~~~~~yIvv---R~~~~~A~y~~~~~~i~---~~ii~~L~~~----~~~-  214 (335)
T PF04007_consen  152 YNGYKELAYLHPFKP------DPEVLKELGLDDEPYIVV---RPEAWKASYDNGKKSIL---PEIIEELEKY----GRN-  214 (335)
T ss_pred             ECCeeeEEeecCCCC------ChhHHHHcCCCCCCEEEE---EeccccCeeecCccchH---HHHHHHHHhh----Cce-
Confidence            678765432221111      256788999876665543   33332     2222222   2223344432    333 


Q ss_pred             EEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCC
Q 017085          218 AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA  297 (377)
Q Consensus       218 l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~  297 (377)
                      ++++....+    . .   ...+++    ++.+....-+..+++.-||+++-      + .|+...||..+|+|.|.+-.
T Consensus       215 vV~ipr~~~----~-~---~~~~~~----~~~i~~~~vd~~~Ll~~a~l~Ig------~-ggTMa~EAA~LGtPaIs~~~  275 (335)
T PF04007_consen  215 VVIIPRYED----Q-R---ELFEKY----GVIIPPEPVDGLDLLYYADLVIG------G-GGTMAREAALLGTPAISCFP  275 (335)
T ss_pred             EEEecCCcc----h-h---hHHhcc----CccccCCCCCHHHHHHhcCEEEe------C-CcHHHHHHHHhCCCEEEecC
Confidence            566655421    1 1   122322    25566555567799999999983      3 37889999999999998754


Q ss_pred             C---CcccceecCcceeeecCCCCChhHHHHHHHHHh
Q 017085          298 G---GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLA  331 (377)
Q Consensus       298 ~---~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~  331 (377)
                      |   +..+++.  +.|++....|  ++++.+.+.+.+
T Consensus       276 g~~~~vd~~L~--~~Gll~~~~~--~~ei~~~v~~~~  308 (335)
T PF04007_consen  276 GKLLAVDKYLI--EKGLLYHSTD--PDEIVEYVRKNL  308 (335)
T ss_pred             CcchhHHHHHH--HCCCeEecCC--HHHHHHHHHHhh
Confidence            3   3344443  3688888877  888888666544

They are found in archaea and some bacteria and have no known function.

>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]

Probab=99.28  E-value=1e-09  Score=98.91  Aligned_cols=188  Identities=14%  Similarity=0.206  Sum_probs=135.7

Q ss_pred             HHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCC-CC
Q 017085          168 RESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI-QD  246 (377)
Q Consensus       168 r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~-~~  246 (377)
                      |.++|+|++.++++++++  ..|-...+...+.++++       .-|+-.|++.|.|.+  +.....+++.+++.|+ .+
T Consensus       421 R~~lglp~~avVf~c~~n--~~K~~pev~~~wmqIL~-------~vP~Svl~L~~~~~~--~~~~~~l~~la~~~Gv~~e  489 (620)
T COG3914         421 RAQLGLPEDAVVFCCFNN--YFKITPEVFALWMQILS-------AVPNSVLLLKAGGDD--AEINARLRDLAEREGVDSE  489 (620)
T ss_pred             hhhcCCCCCeEEEEecCC--cccCCHHHHHHHHHHHH-------hCCCcEEEEecCCCc--HHHHHHHHHHHHHcCCChh
Confidence            778999999998888874  56777888888888766       448999999988733  2578899999999998 47


Q ss_pred             cEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC-----Ccccceec-CcceeeecCCCC
Q 017085          247 RVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG-----GTTEIVVN-GTTGLLHPVGKE  318 (377)
Q Consensus       247 ~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~-----~~~e~~~~-~~~g~~~~~~~~  318 (377)
                      +++|.+..  ++..+.|..||+++-+.   ..+.+++.+||+.||+|||+---.     ....++.+ |..-+++..   
T Consensus       490 RL~f~p~~~~~~h~a~~~iADlvLDTy---PY~g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~agi~e~vA~s---  563 (620)
T COG3914         490 RLRFLPPAPNEDHRARYGIADLVLDTY---PYGGHTTASDALWMGVPVLTRVGEQFASRNGASIATNAGIPELVADS---  563 (620)
T ss_pred             heeecCCCCCHHHHHhhchhheeeecc---cCCCccchHHHHHhcCceeeeccHHHHHhhhHHHHHhcCCchhhcCC---
Confidence            89999976  66788999999999765   566789999999999999974211     01112211 111122221   


Q ss_pred             ChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHhccc
Q 017085          319 GITPLAKNIVKLATHVERRLTMGKRGYERVKE--IFQEHHMAERIAVVLKEVLKKSK  373 (377)
Q Consensus       319 ~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~--~f~~~~~~~~~~~~~~~~~~~~~  373 (377)
                       .++..+.-..+-.|...+.+.+..-......  -|+.+..+++++.+|.++.++..
T Consensus       564 -~~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~~y~  619 (620)
T COG3914         564 -RADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWSEYI  619 (620)
T ss_pred             -HHHHHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHHhhc
Confidence             5667666667767776665554443332222  48999999999999999987653

>TIGR01426 MGT glycosyltransferase, MGT family

Probab=99.20  E-value=3.6e-09  Score=97.05  Aligned_cols=114  Identities=15%  Similarity=0.144  Sum_probs=78.4

Q ss_pred             CCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC----cccceecCcceeeecCCCCC
Q 017085          244 IQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEG  319 (377)
Q Consensus       244 ~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~----~~e~~~~~~~g~~~~~~~~~  319 (377)
                      +++++.+.++... .++|..||++|..+      ...++.||+++|+|+|+....+    +...+.+.+.|..+...+.+
T Consensus       273 ~~~~v~~~~~~p~-~~ll~~~~~~I~hg------G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~  345 (392)
T TIGR01426       273 LPPNVEVRQWVPQ-LEILKKADAFITHG------GMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVT  345 (392)
T ss_pred             CCCCeEEeCCCCH-HHHHhhCCEEEECC------CchHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccccCC
Confidence            3578999998754 48999999999533      2458999999999999975332    33344455677777654434


Q ss_pred             hhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017085          320 ITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL  365 (377)
Q Consensus       320 ~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~  365 (377)
                      .++++++|.++++|++.++.+.+- .+.+...-..+..++.+++++
T Consensus       346 ~~~l~~ai~~~l~~~~~~~~~~~l-~~~~~~~~~~~~aa~~i~~~~  390 (392)
T TIGR01426       346 AEKLREAVLAVLSDPRYAERLRKM-RAEIREAGGARRAADEIEGFL  390 (392)
T ss_pred             HHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHcCCHHHHHHHHHHhh
Confidence            789999999999998755555333 333444456666666665543

This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin

Probab=99.20  E-value=2.3e-09  Score=98.68  Aligned_cols=92  Identities=17%  Similarity=0.065  Sum_probs=67.6

Q ss_pred             CCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC----cccceecCcceeeecCCCC
Q 017085          243 KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKE  318 (377)
Q Consensus       243 ~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~----~~e~~~~~~~g~~~~~~~~  318 (377)
                      ..+++|.+.++. ....+|..||++|.      .|...++.||+++|+|+|+....+    ..+.+...+.|......+.
T Consensus       285 ~~~~~v~~~~~~-p~~~ll~~~d~~I~------hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~  357 (401)
T cd03784         285 DLPDNVRVVDFV-PHDWLLPRCAAVVH------HGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPREL  357 (401)
T ss_pred             CCCCceEEeCCC-CHHHHhhhhheeee------cCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccC
Confidence            446799999997 57789999999993      334679999999999999986543    3445555567777765433


Q ss_pred             ChhHHHHHHHHHhhCHHHHHHHHH
Q 017085          319 GITPLAKNIVKLATHVERRLTMGK  342 (377)
Q Consensus       319 ~~~~la~~i~~l~~~~~~~~~~~~  342 (377)
                      +.+++++++.++++++ .+.+...
T Consensus       358 ~~~~l~~al~~~l~~~-~~~~~~~  380 (401)
T cd03784         358 TAERLAAALRRLLDPP-SRRRAAA  380 (401)
T ss_pred             CHHHHHHHHHHHhCHH-HHHHHHH
Confidence            4899999999999854 3444333

Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.

>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=99.13  E-value=7.5e-08  Score=89.52  Aligned_cols=253  Identities=9%  Similarity=0.045  Sum_probs=143.0

Q ss_pred             HHHhhhcccEEEEcCch-hhhHHH-HHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhh
Q 017085           51 TINTALKADLIVLNTAV-AGKWLD-AVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRT  128 (377)
Q Consensus        51 ~~~~~~~~Div~~~~~~-~~~~~~-~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~  128 (377)
                      +....++||++++-+.. -...+. .+.+.++   ..|+++.+--....|-..+..+..+..|.+++.-.+-.+++++  
T Consensus       304 ~~i~~~kPD~vIlID~PgFNlrLAK~lkk~Gi---~ipviyYVsPqVWAWR~~Rikki~k~vD~ll~IfPFE~~~y~~--  378 (608)
T PRK01021        304 KTILKTNPRTVICIDFPDFHFLLIKKLRKRGY---KGKIVHYVCPSIWAWRPKRKTILEKYLDLLLLILPFEQNLFKD--  378 (608)
T ss_pred             HHHHhcCCCEEEEeCCCCCCHHHHHHHHhcCC---CCCEEEEECccceeeCcchHHHHHHHhhhheecCccCHHHHHh--
Confidence            33456899999997643 222222 2222221   1255555543333444455556667889999999999998874  


Q ss_pred             hhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCC-CeEEEEeccc-cc-cchhHHHHHHHHHHHHH
Q 017085          129 RERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNE-DLLFAIINSV-SR-GKGQDLFLHSFYESLEL  205 (377)
Q Consensus       129 ~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~i~~~G~~-~~-~Kg~~~ll~a~~~l~~~  205 (377)
                         .|   -+++.+.|+.-.. ...       ..++.+.|+++|++++ ..+-+..|+= .+ .+....++++++.  +.
T Consensus       379 ---~g---v~v~yVGHPL~d~-i~~-------~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~--~~  442 (608)
T PRK01021        379 ---SP---LRTVYLGHPLVET-ISS-------FSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLA--SS  442 (608)
T ss_pred             ---cC---CCeEEECCcHHhh-ccc-------CCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH--HH
Confidence               34   3466777765222 111       1124567889999755 4555666742 11 2333444555440  02


Q ss_pred             HhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHH
Q 017085          206 IKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEA  285 (377)
Q Consensus       206 l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea  285 (377)
                      ++      ++.++++.....    ...+.+++..+..++ -.+.+... ++-.++|++||+.+..|       |++.+|+
T Consensus       443 l~------~~l~fvvp~a~~----~~~~~i~~~~~~~~~-~~~~ii~~-~~~~~~m~aaD~aLaaS-------GTaTLEa  503 (608)
T PRK01021        443 LA------STHQLLVSSANP----KYDHLILEVLQQEGC-LHSHIVPS-QFRYELMRECDCALAKC-------GTIVLET  503 (608)
T ss_pred             hc------cCeEEEEecCch----hhHHHHHHHHhhcCC-CCeEEecC-cchHHHHHhcCeeeecC-------CHHHHHH
Confidence            22      357777654331    234556666554331 02333322 13479999999999776       8999999


Q ss_pred             HHcCCcEEEe-CCC------------------CcccceecCc--ceee--ecCCCCChhHHHHHHHHHhhCHHHHHHHHH
Q 017085          286 MAFQLPVLGT-AAG------------------GTTEIVVNGT--TGLL--HPVGKEGITPLAKNIVKLATHVERRLTMGK  342 (377)
Q Consensus       286 ~a~g~PvI~s-~~~------------------~~~e~~~~~~--~g~~--~~~~~~~~~~la~~i~~l~~~~~~~~~~~~  342 (377)
                      +.+|+|.|+. ..+                  +++.++.+..  -=++  -+..+  ++.+++++ ++++|++.++++.+
T Consensus       504 AL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~t--pe~La~~l-~lL~d~~~r~~~~~  580 (608)
T PRK01021        504 ALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQ--PEEVAAAL-DILKTSQSKEKQKD  580 (608)
T ss_pred             HHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCC--HHHHHHHH-HHhcCHHHHHHHHH
Confidence            9999999874 222                  2222222110  0011  02223  89999996 88888887776666


Q ss_pred             HHHH
Q 017085          343 RGYE  346 (377)
Q Consensus       343 ~~~~  346 (377)
                      ...+
T Consensus       581 ~l~~  584 (608)
T PRK01021        581 ACRD  584 (608)
T ss_pred             HHHH
Confidence            5544

>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5

Probab=99.12  E-value=4.7e-08  Score=87.24  Aligned_cols=315  Identities=12%  Similarity=0.048  Sum_probs=157.9

Q ss_pred             hHHHhc-CceEEEEEecCCCcchhHhhhhhhhhcccCceEEE--------------ccchhHHHhhhcccEEEEcCchhh
Q 017085            5 FLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--------------AKGQETINTALKADLIVLNTAVAG   69 (377)
Q Consensus         5 ~~L~~~-G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~Div~~~~~~~~   69 (377)
                      ++|++. ++++.++..+......... .+...+.-..+.+..              ...+..++...+||+|++++-...
T Consensus         1 ~~l~~~~~~~~~li~tG~H~~~~~g~-~~~~~f~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Pd~Vlv~GD~~~   79 (346)
T PF02350_consen    1 KALQKDPGFELILIVTGQHLDPEMGD-TFFEGFGIPKPDYLLDSDSQSMAKSTGLAIIELADVLEREKPDAVLVLGDRNE   79 (346)
T ss_dssp             -HHHCSTTEEEEEEEECSS--CHHHH-HHHHHTT--SEEEE--STTS-HHHHHHHHHHHHHHHHHHHT-SEEEEETTSHH
T ss_pred             ChhhhCCCCCEEEEEeCCCCCHHHHH-HHHhhCCCCCCCcccccccchHHHHHHHHHHHHHHHHHhcCCCEEEEEcCCch
Confidence            467766 8999999877662221111 111111111111111              113455667799999999986644


Q ss_pred             hHHHHHhhcCCCccccceeEEeeee-ccc-----ccchhhhccc-cccceeeeeccchhhHhhhhhhhhhhccCCCeEEE
Q 017085           70 KWLDAVLKEDVPRVLPNVLWWIHEM-RGH-----YFKLDYVKHL-PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVV  142 (377)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~v~~~h~~-~~~-----~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi  142 (377)
                      .+..++.....   ..| +.++|+- ++.     ......+..+ +.++..++.++...+.+.     +.|.++.++.++
T Consensus        80 ~la~alaA~~~---~ip-v~HieaGlRs~d~~~g~~de~~R~~i~~la~lhf~~t~~~~~~L~-----~~G~~~~rI~~v  150 (346)
T PF02350_consen   80 ALAAALAAFYL---NIP-VAHIEAGLRSGDRTEGMPDEINRHAIDKLAHLHFAPTEEARERLL-----QEGEPPERIFVV  150 (346)
T ss_dssp             HHHHHHHHHHT---T-E-EEEES-----S-TTSSTTHHHHHHHHHHH-SEEEESSHHHHHHHH-----HTT--GGGEEE-
T ss_pred             HHHHHHHHHHh---CCC-EEEecCCCCccccCCCCchhhhhhhhhhhhhhhccCCHHHHHHHH-----hcCCCCCeEEEE
Confidence            44333332211   124 4444432 111     2222333444 455666777777776666     568888999999


Q ss_pred             EcCChhhhHHHhhhhhhhhhhHHHHHHHh-CCCCCCeEEEEecccccc---chhHHHHHHHHHHHHHHhhhcccCCCeEE
Q 017085          143 HLGNSKELMEVAEDNVAKRVLREHVRESL-GVRNEDLLFAIINSVSRG---KGQDLFLHSFYESLELIKEKKLEVPSVHA  218 (377)
Q Consensus       143 ~ngi~~~~~~~~~~~~~~~~~~~~~r~~~-~~~~~~~~i~~~G~~~~~---Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l  218 (377)
                      .|..-...........     .......+ ....++++++..=+....   .....+.+++..+.+       . +++.+
T Consensus       151 G~~~~D~l~~~~~~~~-----~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~-------~-~~~~v  217 (346)
T PF02350_consen  151 GNPGIDALLQNKEEIE-----EKYKNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAE-------R-QNVPV  217 (346)
T ss_dssp             --HHHHHHHHHHHTTC-----C-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHH-------H-TTEEE
T ss_pred             ChHHHHHHHHhHHHHh-----hhhhhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHh-------c-CCCcE
Confidence            8865333322111110     00001111 113455555544333222   234455555554433       1 57888


Q ss_pred             EEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHH-HHHHcCCcEEEe
Q 017085          219 VIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITI-EAMAFQLPVLGT  295 (377)
Q Consensus       219 ~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~-Ea~a~g~PvI~s  295 (377)
                      ++.....+   ...+.+.+.+.++   +++++..+.  .++..+++.|+++|--|       | .+. ||..+|+|||.-
T Consensus       218 i~~~hn~p---~~~~~i~~~l~~~---~~v~~~~~l~~~~~l~ll~~a~~vvgdS-------s-GI~eEa~~lg~P~v~i  283 (346)
T PF02350_consen  218 IFPLHNNP---RGSDIIIEKLKKY---DNVRLIEPLGYEEYLSLLKNADLVVGDS-------S-GIQEEAPSLGKPVVNI  283 (346)
T ss_dssp             EEE--S-H---HHHHHHHHHHTT----TTEEEE----HHHHHHHHHHESEEEESS-------H-HHHHHGGGGT--EEEC
T ss_pred             EEEecCCc---hHHHHHHHHhccc---CCEEEECCCCHHHHHHHHhcceEEEEcC-------c-cHHHHHHHhCCeEEEe
Confidence            88877543   3556666666655   289999875  78899999999998544       3 466 999999999998


Q ss_pred             C-CCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017085          296 A-AGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL  365 (377)
Q Consensus       296 ~-~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~  365 (377)
                      . .|.-++....+.+ .++. .+  .+++.+++.+++++++.+.++..     ...-|--.+.++++.+++
T Consensus       284 R~~geRqe~r~~~~n-vlv~-~~--~~~I~~ai~~~l~~~~~~~~~~~-----~~npYgdG~as~rI~~~L  345 (346)
T PF02350_consen  284 RDSGERQEGRERGSN-VLVG-TD--PEAIIQAIEKALSDKDFYRKLKN-----RPNPYGDGNASERIVEIL  345 (346)
T ss_dssp             SSS-S-HHHHHTTSE-EEET-SS--HHHHHHHHHHHHH-HHHHHHHHC-----S--TT-SS-HHHHHHHHH
T ss_pred             cCCCCCHHHHhhcce-EEeC-CC--HHHHHHHHHHHHhChHHHHhhcc-----CCCCCCCCcHHHHHHHhh
Confidence            4 5666666655544 4455 44  99999999999988554444322     112355555666666654

1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.

>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.10  E-value=1.4e-07  Score=82.36  Aligned_cols=276  Identities=17%  Similarity=0.186  Sum_probs=163.8

Q ss_pred             chhHHHhhhcccEEEEcCchhhhHHHHH--hhcCCCccccceeEEeeeecc--cccchhhhc-cc-cccceeeeeccchh
Q 017085           48 GQETINTALKADLIVLNTAVAGKWLDAV--LKEDVPRVLPNVLWWIHEMRG--HYFKLDYVK-HL-PLVAGAMIDSHVTA  121 (377)
Q Consensus        48 ~~~~~~~~~~~Div~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~h~~~~--~~~~~~~~~-~~-~~~~~~~~~s~~~~  121 (377)
                      .+..++.+.+||+|.+|+-+...+..++  +...+     |+.-.--+.+.  .++.....+ .. ..++..++++...+
T Consensus        83 ~~~~vl~~~kPD~VlVhGDT~t~lA~alaa~~~~I-----pV~HvEAGlRt~~~~~PEE~NR~l~~~~S~~hfapte~ar  157 (383)
T COG0381          83 GLSKVLEEEKPDLVLVHGDTNTTLAGALAAFYLKI-----PVGHVEAGLRTGDLYFPEEINRRLTSHLSDLHFAPTEIAR  157 (383)
T ss_pred             HHHHHHHhhCCCEEEEeCCcchHHHHHHHHHHhCC-----ceEEEecccccCCCCCcHHHHHHHHHHhhhhhcCChHHHH
Confidence            4456677899999999987644443222  22233     22221222211  112222122 22 34566677777777


Q ss_pred             hHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHH-hCCCCCCeEEEEeccccc-cchhHHHHHHH
Q 017085          122 EYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRES-LGVRNEDLLFAIINSVSR-GKGQDLFLHSF  199 (377)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~i~~~G~~~~-~Kg~~~ll~a~  199 (377)
                      +++.     +-|.+.+++.|+.|.+-........ ...   ........ +....++++++..=|-.. .+++..+++++
T Consensus       158 ~nLl-----~EG~~~~~IfvtGnt~iDal~~~~~-~~~---~~~~~~~~~~~~~~~~~iLvT~HRreN~~~~~~~i~~al  228 (383)
T COG0381         158 KNLL-----REGVPEKRIFVTGNTVIDALLNTRD-RVL---EDSKILAKGLDDKDKKYILVTAHRRENVGEPLEEICEAL  228 (383)
T ss_pred             HHHH-----HcCCCccceEEeCChHHHHHHHHHh-hhc---cchhhHHhhhccccCcEEEEEcchhhcccccHHHHHHHH
Confidence            7666     5688888999999976333222111 000   01111222 444444566555544322 37788888888


Q ss_pred             HHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHH-HhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCC
Q 017085          200 YESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYV-MQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGE  276 (377)
Q Consensus       200 ~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~-~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e  276 (377)
                      .++.+       +++++.++.--...       ..++... ..++-.++|+++.+.  .+...++..|-+++--|     
T Consensus       229 ~~i~~-------~~~~~~viyp~H~~-------~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~iltDS-----  289 (383)
T COG0381         229 REIAE-------EYPDVIVIYPVHPR-------PRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFLILTDS-----  289 (383)
T ss_pred             HHHHH-------hCCCceEEEeCCCC-------hhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceEEEecC-----
Confidence            87766       34676665544431       2333333 455656679999886  67788888887666333     


Q ss_pred             ccchHHHHHHHcCCcEEEeC-CCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHH
Q 017085          277 CFGRITIEAMAFQLPVLGTA-AGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEH  355 (377)
Q Consensus       277 ~~~~~~~Ea~a~g~PvI~s~-~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~  355 (377)
                        |...=||-..|+||++-. ...-+|.+..| .-.++.. +  .+.+.+++..++++++.+++|+....-     |.-.
T Consensus       290 --GgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg~-~--~~~i~~~~~~ll~~~~~~~~m~~~~np-----Ygdg  358 (383)
T COG0381         290 --GGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVGT-D--EENILDAATELLEDEEFYERMSNAKNP-----YGDG  358 (383)
T ss_pred             --CchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeCc-c--HHHHHHHHHHHhhChHHHHHHhcccCC-----CcCc
Confidence              556789999999999875 55677776544 3344443 3  799999999999999999888765433     4444


Q ss_pred             HHHHHHHHHHHH
Q 017085          356 HMAERIAVVLKE  367 (377)
Q Consensus       356 ~~~~~~~~~~~~  367 (377)
                      ...+++.+++..
T Consensus       359 ~as~rIv~~l~~  370 (383)
T COG0381         359 NASERIVEILLN  370 (383)
T ss_pred             chHHHHHHHHHH
Confidence            455555555443

>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A

Probab=99.07  E-value=2.8e-10  Score=90.19  Aligned_cols=127  Identities=20%  Similarity=0.209  Sum_probs=66.8

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEc---------------cchhHHH--hhhcccEEEEc
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA---------------KGQETIN--TALKADLIVLN   64 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~--~~~~~Div~~~   64 (377)
                      +|+++|.++||+|++++.........        ....++.+...               ..+..++  ...+||+||+|
T Consensus         9 ~l~~~L~~~G~~V~v~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Dvv~~~   80 (160)
T PF13579_consen    9 ELARALAARGHEVTVVTPQPDPEDDE--------EEEDGVRVHRLPLPRRPWPLRLLRFLRRLRRLLAARRERPDVVHAH   80 (160)
T ss_dssp             HHHHHHHHTT-EEEEEEE---GGG-S--------EEETTEEEEEE--S-SSSGGGHCCHHHHHHHHCHHCT---SEEEEE
T ss_pred             HHHHHHHHCCCEEEEEecCCCCcccc--------cccCCceEEeccCCccchhhhhHHHHHHHHHHHhhhccCCeEEEec
Confidence            68999999999999999766543211        22234444221               1223344  66899999999


Q ss_pred             CchhhhHHHHHhhcCCCccccceeEEeeeecccc--------cchhhhccccccceeeeeccchhhHhhhhhhhhhhccC
Q 017085           65 TAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY--------FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKM  136 (377)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~--------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~  136 (377)
                      ++..+. +..++.   .....|++.+.|+.....        +.......++.+|.++++|+...+.+.     .+|+++
T Consensus        81 ~~~~~~-~~~~~~---~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~-----~~g~~~  151 (160)
T PF13579_consen   81 SPTAGL-VAALAR---RRRGIPLVVTVHGTLFRRGSRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLR-----RYGVPP  151 (160)
T ss_dssp             HHHHHH-HHHHHH---HHHT--EEEE-SS-T------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHH-----HH---G
T ss_pred             ccchhH-HHHHHH---HccCCcEEEEECCCchhhccchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHH-----HhCCCC
Confidence            855332 222222   112358999999854221        111223556789999999999988877     467888


Q ss_pred             CCeEEEEcC
Q 017085          137 PDTYVVHLG  145 (377)
Q Consensus       137 ~~~~vi~ng  145 (377)
                      +++.|||||
T Consensus       152 ~ri~vipnG  160 (160)
T PF13579_consen  152 DRIHVIPNG  160 (160)
T ss_dssp             GGEEE----
T ss_pred             CcEEEeCcC
Confidence            999999998

>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1

Probab=99.01  E-value=2e-08  Score=89.38  Aligned_cols=120  Identities=17%  Similarity=0.205  Sum_probs=83.1

Q ss_pred             CCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc
Q 017085          175 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT  254 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~  254 (377)
                      +.+.+++++|.....    .++++++.+           ++..++++|.....     .          -.++|++.++.
T Consensus       191 ~~~~iLv~~gg~~~~----~~~~~l~~~-----------~~~~~~v~g~~~~~-----~----------~~~ni~~~~~~  240 (318)
T PF13528_consen  191 DEPKILVYFGGGGPG----DLIEALKAL-----------PDYQFIVFGPNAAD-----P----------RPGNIHVRPFS  240 (318)
T ss_pred             CCCEEEEEeCCCcHH----HHHHHHHhC-----------CCCeEEEEcCCccc-----c----------cCCCEEEeecC
Confidence            456788888876543    556665532           77899988775210     0          04689999987


Q ss_pred             -CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCccc------ceecCcceeeecCCCCChhHHHHHH
Q 017085          255 -LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTE------IVVNGTTGLLHPVGKEGITPLAKNI  327 (377)
Q Consensus       255 -~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e------~~~~~~~g~~~~~~~~~~~~la~~i  327 (377)
                       .++.++|+.||+++..+      .-+++.|++++|+|+|+-...+..|      .+++.+.|..++..+-+.+.|+++|
T Consensus       241 ~~~~~~~m~~ad~vIs~~------G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l  314 (318)
T PF13528_consen  241 TPDFAELMAAADLVISKG------GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFL  314 (318)
T ss_pred             hHHHHHHHHhCCEEEECC------CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHH
Confidence             89999999999999432      3456999999999999987654333      2333456666655443478888887


Q ss_pred             HHH
Q 017085          328 VKL  330 (377)
Q Consensus       328 ~~l  330 (377)
                      +++
T Consensus       315 ~~~  317 (318)
T PF13528_consen  315 ERL  317 (318)
T ss_pred             hcC
Confidence            653

>PRK02797 4-alpha-L-fucosyltransferase; Provisional

Probab=98.96  E-value=2.5e-07  Score=78.33  Aligned_cols=270  Identities=10%  Similarity=0.065  Sum_probs=158.8

Q ss_pred             hhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeeccc----ccchh-----hhccccccceeeeeccchhhHhh
Q 017085           55 ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGH----YFKLD-----YVKHLPLVAGAMIDSHVTAEYWK  125 (377)
Q Consensus        55 ~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~----~~~~~-----~~~~~~~~~~~~~~s~~~~~~~~  125 (377)
                      ..+.+-+++|+.+......+++...++.  .++.|++.+..-.    .++.+     .+...+++.++++ ......++.
T Consensus        37 ~~r~~rff~HGqFn~~lwlall~g~~~~--~q~yWhiWGaDLYe~~~~lk~rlfy~lRR~aq~rvg~v~a-trGD~~~~a  113 (322)
T PRK02797         37 ANRAQRFFLHGQFNPTLWLALLSGKIKP--KQFYWHIWGADLYEESKGLKFRLFYPLRRLAQKRVGHVFA-TRGDLSYFA  113 (322)
T ss_pred             hCccceEEEecCCCHHHHHHHHhCCcCc--cceEEEEEChhhhhcccchhHHHHHHHHHHHHhhcCeEEE-ecchHHHHH
Confidence            4778889999877444333333333332  3677776654211    01111     1223357778888 555555544


Q ss_pred             hhhhhhhhccCCCeEEEEcCChhhhH-HHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHH
Q 017085          126 NRTRERLRIKMPDTYVVHLGNSKELM-EVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLE  204 (377)
Q Consensus       126 ~~~~~~~~~~~~~~~vi~ngi~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~  204 (377)
                      +.   .++++.. .  ++.+...+.. .....+              .-+.++++|+...+-++.-++..+++++.+...
T Consensus       114 ~~---~~~v~~~-l--lyfpt~m~~~l~~~~~~--------------~~~~~~~tIlvGNSgd~SN~Hie~L~~l~~~~~  173 (322)
T PRK02797        114 QR---HPKVPGS-L--LYFPTRMDPSLNTMAND--------------RQRAGKMTILVGNSGDRSNRHIEALRALHQQFG  173 (322)
T ss_pred             Hh---cCCCCcc-E--EecCCcchhhhcccccc--------------ccCCCceEEEEeCCCCCcccHHHHHHHHHHHhC
Confidence            32   4555543 3  3333222211 110000              001345566543334667778777777765422


Q ss_pred             HHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc---CCHHHHHHhcCEEEecCCCCCCccchH
Q 017085          205 LIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT---LTVAPYLAAIDVLVQNSQAWGECFGRI  281 (377)
Q Consensus       205 ~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~---~~~~~~~~~adv~l~ps~~~~e~~~~~  281 (377)
                               .++++++.=+=+..+..|.+++++..+++--.+++..+-..   ++..++++.||+.++...- .+|.|+.
T Consensus       174 ---------~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~R-QQgiGnl  243 (322)
T PRK02797        174 ---------DNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIFAR-QQGIGTL  243 (322)
T ss_pred             ---------CCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEeech-hhHHhHH
Confidence                     77888876443323347999999999988765788877653   8899999999999887653 7888865


Q ss_pred             HHHHHHcCCcEEEeC-CCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 017085          282 TIEAMAFQLPVLGTA-AGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAER  360 (377)
Q Consensus       282 ~~Ea~a~g~PvI~s~-~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~  360 (377)
                      ++ .+.+|+||+.+. ++-..++.+.+ .-+++...+-|...+.+          ..+++....++.+.  |+.++..+.
T Consensus       244 ~l-Li~~G~~v~l~r~n~fwqdl~e~g-v~Vlf~~d~L~~~~v~e----------~~rql~~~dk~~I~--Ff~pn~~~~  309 (322)
T PRK02797        244 CL-LIQLGKPVVLSRDNPFWQDLTEQG-LPVLFTGDDLDEDIVRE----------AQRQLASVDKNIIA--FFSPNYLQG  309 (322)
T ss_pred             HH-HHHCCCcEEEecCCchHHHHHhCC-CeEEecCCcccHHHHHH----------HHHHHHhhCcceee--ecCHhHHHH
Confidence            55 899999999985 66677766444 33434433311222222          12233333344443  999999999


Q ss_pred             HHHHHHHHHhc
Q 017085          361 IAVVLKEVLKK  371 (377)
Q Consensus       361 ~~~~~~~~~~~  371 (377)
                      |.++++....+
T Consensus       310 W~~~l~~~~g~  320 (322)
T PRK02797        310 WRNALAIAAGE  320 (322)
T ss_pred             HHHHHHHhhCC
Confidence            99999876554

>TIGR00661 MJ1255 conserved hypothetical protein

Probab=98.93  E-value=1.5e-07  Score=83.83  Aligned_cols=81  Identities=12%  Similarity=0.151  Sum_probs=57.7

Q ss_pred             CCcEEEecCc-CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCccc------ceecCcceeeecCCC
Q 017085          245 QDRVHFVNKT-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTE------IVVNGTTGLLHPVGK  317 (377)
Q Consensus       245 ~~~v~~~g~~-~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e------~~~~~~~g~~~~~~~  317 (377)
                      ++++.+.++. +++.++|..||+++.-+      ...++.||+++|+|+|.....+..|      .+.+.+.|...+..+
T Consensus       228 ~~~v~~~~~~~~~~~~~l~~ad~vI~~~------G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~  301 (321)
T TIGR00661       228 NENVEIRRITTDNFKELIKNAELVITHG------GFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKE  301 (321)
T ss_pred             CCCEEEEECChHHHHHHHHhCCEEEECC------ChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhh
Confidence            4689999987 58999999999999644      2357999999999999988765333      344456777777655


Q ss_pred             CChhHHHHHHHHHhhCH
Q 017085          318 EGITPLAKNIVKLATHV  334 (377)
Q Consensus       318 ~~~~~la~~i~~l~~~~  334 (377)
                        . ++.+++...++++
T Consensus       302 --~-~~~~~~~~~~~~~  315 (321)
T TIGR00661       302 --L-RLLEAILDIRNMK  315 (321)
T ss_pred             --H-HHHHHHHhccccc
Confidence              4 4444554444443

This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.

>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria

Probab=98.82  E-value=6.3e-07  Score=81.52  Aligned_cols=282  Identities=12%  Similarity=0.157  Sum_probs=137.2

Q ss_pred             ccCceEEEccchhHHHhhhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccch----------hhhccc
Q 017085           38 DRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL----------DYVKHL  107 (377)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~----------~~~~~~  107 (377)
                      ..+.+++.......+....+.+++++++.......      .......+++..-|+..-..+..          ......
T Consensus        59 ~~~~~~v~~~s~~~~~~~~~Ak~~i~~~~~~~~~~------~~~~~~~~~i~lwHG~~~K~~g~~~~~~~~~~~~~~~~~  132 (369)
T PF04464_consen   59 PKGIKVVKFGSLKHIYYLARAKYIISDSYFPDLIY------FKKRKNQKYIQLWHGIPLKKIGYDSPDNKNYRKNYKRNY  132 (369)
T ss_dssp             -SS-EEEETTSHHHHHHHHHEEEEEESS---T--T------S---TTSEEEE--SS--SB--GGG-S---TS-HHHHHHH
T ss_pred             cCCceEEeecHHHHHHHHHhCcEEEECCCCCcccc------cccCCCcEEEEecCCCcccccchhccccccchhhhhhhc
Confidence            45667777777777776777888888743322110      11122357888888872111111          233445


Q ss_pred             cccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEecccc
Q 017085          108 PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS  187 (377)
Q Consensus       108 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~  187 (377)
                      ...|.+++.|+...+.+.+    .++.+..++  +..|.+....-.....    ..++.+++.++++.++.+|+|+-.++
T Consensus       133 ~~~d~~~~~s~~~~~~~~~----~f~~~~~~i--~~~G~PR~D~l~~~~~----~~~~~i~~~~~~~~~~k~ILyaPT~R  202 (369)
T PF04464_consen  133 RNYDYFIVSSEFEKEIFKK----AFGYPEDKI--LVTGYPRNDYLFNKSK----ENRNRIKKKLGIDKDKKVILYAPTWR  202 (369)
T ss_dssp             TT-SEEEESSHHHHHHHHH----HTT--GGGE--EES--GGGHHHHHSTT-----HHHHHHHHTT--SS-EEEEEE----
T ss_pred             cCCcEEEECCHHHHHHHHH----HhccCcceE--EEeCCCeEhHHhccCH----HHHHHHHHHhccCCCCcEEEEeeccc
Confidence            7889999999988887775    667666544  4456644322211111    11567888999999988999986654


Q ss_pred             ccchh------HHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHH-HHHHHHHhcCCCCcEEEecCcCCHHHH
Q 017085          188 RGKGQ------DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFES-ELRNYVMQKKIQDRVHFVNKTLTVAPY  260 (377)
Q Consensus       188 ~~Kg~------~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~-~l~~~~~~~~~~~~v~~~g~~~~~~~~  260 (377)
                      .....      ...++ +..+. .+.     ..++.+++-...      ... .....   ....+++.+.....++.++
T Consensus       203 ~~~~~~~~~~~~~~~~-~~~l~-~~~-----~~~~~li~k~Hp------~~~~~~~~~---~~~~~~i~~~~~~~~~~~l  266 (369)
T PF04464_consen  203 DNSSNEYFKFFFSDLD-FEKLN-FLL-----KNNYVLIIKPHP------NMKKKFKDF---KEDNSNIIFVSDNEDIYDL  266 (369)
T ss_dssp             GGG--GGSS----TT--HHHHH-HHH-----TTTEEEEE--SH------HHHTT-------TT-TTTEEE-TT-S-HHHH
T ss_pred             cccccccccccccccC-HHHHH-HHh-----CCCcEEEEEeCc------hhhhchhhh---hccCCcEEECCCCCCHHHH
Confidence            43322      12222 22222 121     278888877663      222 11111   2335688888877789999


Q ss_pred             HHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe--CCCC-------cccceecCcceeeecCCCCChhHHHHHHHHHh
Q 017085          261 LAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT--AAGG-------TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLA  331 (377)
Q Consensus       261 ~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s--~~~~-------~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~  331 (377)
                      +..||+++.=       ++-++.|++.+++|||..  |...       ..+ ..+...|-++.  +  .++|.++|..++
T Consensus       267 l~~aDiLITD-------ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~~~~~pg~~~~--~--~~eL~~~i~~~~  334 (369)
T PF04464_consen  267 LAAADILITD-------YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-YEEDLPGPIVY--N--FEELIEAIENII  334 (369)
T ss_dssp             HHT-SEEEES-------S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--TTTSSSS-EES--S--HHHHHHHHTTHH
T ss_pred             HHhcCEEEEe-------chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-hHhhCCCceeC--C--HHHHHHHHHhhh
Confidence            9999999832       345899999999999965  3211       111 11122333433  2  899999999988


Q ss_pred             hCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 017085          332 THVERRLTMGKRGYERVKEIFQEHHMAERIAVV  364 (377)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~  364 (377)
                      +++....+..+..++.... |.-.+.++++.+.
T Consensus       335 ~~~~~~~~~~~~~~~~~~~-~~Dg~s~eri~~~  366 (369)
T PF04464_consen  335 ENPDEYKEKREKFRDKFFK-YNDGNSSERIVNY  366 (369)
T ss_dssp             HHHHHTHHHHHHHHHHHST-T--S-HHHHHHHH
T ss_pred             hCCHHHHHHHHHHHHHhCC-CCCchHHHHHHHH
Confidence            7665443333333332212 3334555555544

They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.

>COG1817 Uncharacterized protein conserved in archaea [Function unknown]

Probab=98.78  E-value=1.1e-06  Score=73.86  Aligned_cols=267  Identities=12%  Similarity=0.092  Sum_probs=151.1

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEE-------------------ccchhHHHhhhcccEEE
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS-------------------AKGQETINTALKADLIV   62 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~Div~   62 (377)
                      ++..+|.++||+|.+-|.+.+.        ..+.+.-.|+....                   ...+.++..+.+||+.+
T Consensus        18 ~lI~elekkG~ev~iT~rd~~~--------v~~LLd~ygf~~~~Igk~g~~tl~~Kl~~~~eR~~~L~ki~~~~kpdv~i   89 (346)
T COG1817          18 NLIWELEKKGHEVLITCRDFGV--------VTELLDLYGFPYKSIGKHGGVTLKEKLLESAERVYKLSKIIAEFKPDVAI   89 (346)
T ss_pred             HHHHHHHhCCeEEEEEEeecCc--------HHHHHHHhCCCeEeecccCCccHHHHHHHHHHHHHHHHHHHhhcCCceEe
Confidence            4678899999999999976543        33334444443322                   11345666789999998


Q ss_pred             EcCchhhhHHHHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEE
Q 017085           63 LNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVV  142 (377)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi  142 (377)
                      .-++..  .....+..++     |.+.....-.   .....+..++.++.++.+...-...+.     .+|..+.++ +-
T Consensus        90 ~~~s~~--l~rvafgLg~-----psIi~~D~eh---A~~qnkl~~Pla~~ii~P~~~~~~~~~-----~~G~~p~~i-~~  153 (346)
T COG1817          90 GKHSPE--LPRVAFGLGI-----PSIIFVDNEH---AEAQNKLTLPLADVIITPEAIDEEELL-----DFGADPNKI-SG  153 (346)
T ss_pred             ecCCcc--hhhHHhhcCC-----ceEEecCChh---HHHHhhcchhhhhheecccccchHHHH-----HhCCCccce-ec
Confidence            733221  1111222233     3333222211   112234455778888887776655544     556554433 33


Q ss_pred             EcCChhh----hHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEE-ec-----cccccchhHHHHHHHHHHHHHHhhhccc
Q 017085          143 HLGNSKE----LMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI-IN-----SVSRGKGQDLFLHSFYESLELIKEKKLE  212 (377)
Q Consensus       143 ~ngi~~~----~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~-~G-----~~~~~Kg~~~ll~a~~~l~~~l~~~~~~  212 (377)
                      .||+..-    .|.+          ..++.+++|+..+...|++ .-     -....++++.+.+++..+.         
T Consensus       154 ~~giae~~~v~~f~p----------d~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~---------  214 (346)
T COG1817         154 YNGIAELANVYGFVP----------DPEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELK---------  214 (346)
T ss_pred             ccceeEEeecccCCC----------CHHHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHH---------
Confidence            4555321    1221          2467888999886444432 11     1233556666666666542         


Q ss_pred             CCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcE
Q 017085          213 VPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPV  292 (377)
Q Consensus       213 ~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~Pv  292 (377)
                        +.-.+++...        +..++..+.+   ++++.....-|-.+++.-|++++       .+.|+..-||+..|+|.
T Consensus       215 --k~giV~ipr~--------~~~~eife~~---~n~i~pk~~vD~l~Llyya~lvi-------g~ggTMarEaAlLGtpa  274 (346)
T COG1817         215 --KYGIVLIPRE--------KEQAEIFEGY---RNIIIPKKAVDTLSLLYYATLVI-------GAGGTMAREAALLGTPA  274 (346)
T ss_pred             --hCcEEEecCc--------hhHHHHHhhh---ccccCCcccccHHHHHhhhheee-------cCCchHHHHHHHhCCce
Confidence              2335555553        1122222222   23444444456567888899887       33477889999999999


Q ss_pred             EEeCCC---CcccceecCcceeeecCCCCChhHHHHHHHHHhhCHH
Q 017085          293 LGTAAG---GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVE  335 (377)
Q Consensus       293 I~s~~~---~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~  335 (377)
                      |.+..|   +..++..  +.|.++...|  +.+..+...+++.++.
T Consensus       275 Is~~pGkll~vdk~li--e~G~~~~s~~--~~~~~~~a~~~l~~~~  316 (346)
T COG1817         275 ISCYPGKLLAVDKYLI--EKGLLYHSTD--EIAIVEYAVRNLKYRR  316 (346)
T ss_pred             EEecCCccccccHHHH--hcCceeecCC--HHHHHHHHHHHhhchh
Confidence            998744   3444442  4788998887  7777777777776664

>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long)

Probab=98.76  E-value=5.1e-06  Score=71.52  Aligned_cols=268  Identities=10%  Similarity=0.023  Sum_probs=148.0

Q ss_pred             hhhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc----cchhh-----hccccccceeeeeccchhhHh
Q 017085           54 TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY----FKLDY-----VKHLPLVAGAMIDSHVTAEYW  124 (377)
Q Consensus        54 ~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~----~~~~~-----~~~~~~~~~~~~~s~~~~~~~  124 (377)
                      +.++.+-+++|+.+......+++...++.  .++.|++.+..-..    ++.+.     +...+++..+++ ......++
T Consensus        75 ~~~r~~kff~HGqFn~~lwlaLl~g~~~~--~k~~WhIWGaDLYe~~~~~k~rlfy~lRr~aq~rvg~V~a-t~GDl~~~  151 (360)
T PF07429_consen   75 KADRADKFFLHGQFNPWLWLALLFGKIKL--KKCYWHIWGADLYEDSRSLKFRLFYFLRRLAQKRVGHVFA-TRGDLAYF  151 (360)
T ss_pred             hhCccceEEEeccCcHHHHHHHHcCCccc--cceEEEEeCchhhccccccchhHHHHHHHHHHhhcCeEEE-EcchHHHH
Confidence            34788999999877443333333333322  46777776643111    11111     112245666655 44455555


Q ss_pred             hhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEecc-ccccchhHHHHHHHHHHH
Q 017085          125 KNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS-VSRGKGQDLFLHSFYESL  203 (377)
Q Consensus       125 ~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~-~~~~Kg~~~ll~a~~~l~  203 (377)
                      .+    .++..+..+...|+.++.........               .-..++.+|+ +|+ -++.-++-.+++++.+..
T Consensus       152 ~q----~~~~~~~~~lyfPt~m~~~~~~~~~~---------------~~~~~~ltIL-vGNSgd~sNnHieaL~~L~~~~  211 (360)
T PF07429_consen  152 QQ----RYPRVPASLLYFPTRMDPALTLSEKN---------------KKNKGKLTIL-VGNSGDPSNNHIEALEALKQQF  211 (360)
T ss_pred             HH----HcCCCCceEEEcCCCCchhhhccccc---------------cCCCCceEEE-EcCCCCCCccHHHHHHHHHHhc
Confidence            55    44323333444444444432111110               0113455665 455 466677766666655421


Q ss_pred             HHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEec-Cc--CCHHHHHHhcCEEEecCCCCCCccch
Q 017085          204 ELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN-KT--LTVAPYLAAIDVLVQNSQAWGECFGR  280 (377)
Q Consensus       204 ~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g-~~--~~~~~~~~~adv~l~ps~~~~e~~~~  280 (377)
                               ..++++++-=+=+.....|.+++.+..+++--.+++..+- +.  +|..++++.||+.+++..- ..|+|+
T Consensus       212 ---------~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~~R-QQgiGn  281 (360)
T PF07429_consen  212 ---------GDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFNHNR-QQGIGN  281 (360)
T ss_pred             ---------CCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEeech-hhhHhH
Confidence                     2578877643322222368899999998875556777654 33  8999999999999998773 788885


Q ss_pred             HHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHH
Q 017085          281 ITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQEHHMAE  359 (377)
Q Consensus       281 ~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~f~~~~~~~  359 (377)
                      .+ =.+.+|+||+.+.....-..+.+.+.-+++..++-+.+.++++=.++.. |+.           .+  .|...+..+
T Consensus       282 I~-lLl~~G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~~~dk~-----------~i--aFf~pny~~  347 (360)
T PF07429_consen  282 IC-LLLQLGKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQLANVDKQ-----------QI--AFFAPNYLQ  347 (360)
T ss_pred             HH-HHHHcCCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHHhhCccc-----------ce--eeeCCchHH
Confidence            54 4899999999997544433343333334444333334555555444433 221           11  166666677


Q ss_pred             HHHHHHHHH
Q 017085          360 RIAVVLKEV  368 (377)
Q Consensus       360 ~~~~~~~~~  368 (377)
                      .|.+.+.-+
T Consensus       348 ~w~~~l~~~  356 (360)
T PF07429_consen  348 GWRQALRLA  356 (360)
T ss_pred             HHHHHHHHH
Confidence            776666543

This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall

>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.69  E-value=7.7e-07  Score=77.12  Aligned_cols=315  Identities=12%  Similarity=0.061  Sum_probs=177.9

Q ss_pred             HhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceE-EEcc----chhHHHhhhcccEEEEcCch-------hhh
Q 017085            3 LAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV-ISAK----GQETINTALKADLIVLNTAV-------AGK   70 (377)
Q Consensus         3 la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~Div~~~~~~-------~~~   70 (377)
                      +.++|...||+|+.+-+.......     ......+.+... +...    .....++..+||+|++-...       ...
T Consensus        23 ~~~~l~~~g~kvlflE~~~~~~~k-----~rd~~~~~~~~~~~~~~~~e~~~~~~i~~fk~d~iv~~~~~~~~~~~~~~~   97 (373)
T COG4641          23 LLRALKMDGMKVLFLESGDFWDYK-----NRDIDAEDGCTEAFYKDQPELESLLYIREFKPDIIVNMSGDDQPDEESTID   97 (373)
T ss_pred             HHHHHHhccceEEEEecccHHhhh-----cccccCccchhheeecCcHHHHHHHHHHhcCCcEEEEecccccccceehHH
Confidence            457888899999999755421100     001111122222 1111    22344577899999887633       232


Q ss_pred             HHHHHhhcCCCccccceeEEeeeecccc--cc----hhh-hccccccceeeeeccch-hhHhhhhhhhhhhccCCCeEEE
Q 017085           71 WLDAVLKEDVPRVLPNVLWWIHEMRGHY--FK----LDY-VKHLPLVAGAMIDSHVT-AEYWKNRTRERLRIKMPDTYVV  142 (377)
Q Consensus        71 ~~~~~~~~~~~~~~~~~v~~~h~~~~~~--~~----~~~-~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~vi  142 (377)
                      +..++....+     |+++|.-+.....  +.    ..+ ++.+...|.++..+... +..+.+    ..  ...++.-+
T Consensus        98 ~~a~l~~~~l-----~~~~w~te~p~~~~~~~~~~~~~~~~~~l~~fd~v~~~g~~l~~~~yyq----~~--~~~~~~~~  166 (373)
T COG4641          98 LWAWLKRKCL-----PVIVWYTEDPYDTDIFSQVAEEQLARRPLFIFDNVLSFGGGLVANKYYQ----EG--GARNCYYL  166 (373)
T ss_pred             HHHHhhcCCc-----ceEEEEeccchhhhhhhhhhHHHhhccccchhhhhhhccchHHHHHHHH----hh--cccceecc
Confidence            3333333333     4444444331110  10    111 11222233333333333 222222    21  23568889


Q ss_pred             EcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEe
Q 017085          143 HLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIG  222 (377)
Q Consensus       143 ~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G  222 (377)
                      +.++|.+.+.+.+...                .-.--+.++|...+. ..+.+-+.+.+=..++.      .+-++...|
T Consensus       167 ~~a~d~~~~~~i~~da----------------~~~~dL~~ign~~pD-r~e~~ke~~~~ps~kl~------v~rr~~~~g  223 (373)
T COG4641         167 PWAVDDSLFHPIPPDA----------------SYDVDLNLIGNPYPD-RVEEIKEFFVEPSFKLM------VDRRFYVLG  223 (373)
T ss_pred             CccCCchhcccCCccc----------------cceeeeEEecCCCcc-HHHHHHHHhhccchhhh------ccceeeecC
Confidence            9999998887654221                122346778876553 22222222211000110      124555556


Q ss_pred             cCCCcccHHHHHHHHHHHhcCCCCcEEEecCc---CCHHHHHHhcCEEEecCCC-CCCc---cchHHHHHHHcCCcEEEe
Q 017085          223 SDMNAQTKFESELRNYVMQKKIQDRVHFVNKT---LTVAPYLAAIDVLVQNSQA-WGEC---FGRITIEAMAFQLPVLGT  295 (377)
Q Consensus       223 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~---~~~~~~~~~adv~l~ps~~-~~e~---~~~~~~Ea~a~g~PvI~s  295 (377)
                      ..-      ...+...    -..+++...|+.   +.+...++..|+.+.-++. ..++   +.+-+.|+++||.|.+++
T Consensus       224 ~~y------~~~~~~~----~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~  293 (373)
T COG4641         224 PRY------PDDIWGR----TWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITD  293 (373)
T ss_pred             Ccc------chhhhcc----cccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCccccc
Confidence            541      1111111    112345555543   6688888888988754332 1122   368899999999999999


Q ss_pred             CCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Q 017085          296 AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK  370 (377)
Q Consensus       296 ~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  370 (377)
                      ...++..++..|+.-++..  |  ..++.+.+..++..++.++++++.+++.+...|+.+.-+..+.+....+..
T Consensus       294 ~~~~~e~~f~pgk~~iv~~--d--~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI~~  364 (373)
T COG4641         294 YWKDLEKFFKPGKDIIVYQ--D--SKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIASINI  364 (373)
T ss_pred             cHHHHHHhcCCchheEEec--C--HHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence            9999999998876544443  3  899999999999999999999999999999989998888777777766543

>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]

Probab=98.47  E-value=1.3e-05  Score=70.51  Aligned_cols=107  Identities=16%  Similarity=0.209  Sum_probs=75.8

Q ss_pred             CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcc----cceecC-cceeeec-----CCCCChhHHH
Q 017085          255 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTT----EIVVNG-TTGLLHP-----VGKEGITPLA  324 (377)
Q Consensus       255 ~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~----e~~~~~-~~g~~~~-----~~~~~~~~la  324 (377)
                      -|..++.+.|.+.|+||+  +|++|.+..|.-.||+|.|+|+..|+.    |.+.+. ..|+.+-     ..|+++++|+
T Consensus       492 lDYeeFVRGCHLGVFPSY--YEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~  569 (692)
T KOG3742|consen  492 LDYEEFVRGCHLGVFPSY--YEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLA  569 (692)
T ss_pred             CCHHHHhccccccccccc--cCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHH
Confidence            577899999999999999  999999999999999999999987754    444332 3465542     2233477777


Q ss_pred             HHHHHHhhCHHHHHHH-HHHHHHHHHHhcCHHHHHHHHHHH
Q 017085          325 KNIVKLATHVERRLTM-GKRGYERVKEIFQEHHMAERIAVV  364 (377)
Q Consensus       325 ~~i~~l~~~~~~~~~~-~~~~~~~~~~~f~~~~~~~~~~~~  364 (377)
                      +-+........ ++++ ..+--++..+-.+|..+...|.+.
T Consensus       570 ~~m~~F~~qsR-RQRIiqRNrtErLSdLLDWk~lG~~Y~~a  609 (692)
T KOG3742|consen  570 SFMYEFCKQSR-RQRIIQRNRTERLSDLLDWKYLGRYYRKA  609 (692)
T ss_pred             HHHHHHHHHHH-HHHHHHhcchhhHHHHHhHHHHhHHHHHH
Confidence            77777665333 3333 334445566678888887766654

>PRK14089 ipid-A-disaccharide synthase; Provisional

Probab=98.47  E-value=1.5e-05  Score=70.83  Aligned_cols=185  Identities=12%  Similarity=0.052  Sum_probs=102.8

Q ss_pred             hcccEEEEcCch-hhhHHHHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhc
Q 017085           56 LKADLIVLNTAV-AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRI  134 (377)
Q Consensus        56 ~~~Div~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  134 (377)
                      ++||++++-+.. ....+...++...+  ..|+++.+--..+.|-..+.....+.+|.+.+...+-.+++        | 
T Consensus        75 ~~pd~~i~iD~p~Fnl~lak~~k~~~~--~i~viyyi~PqvWAWr~~R~~~i~k~~d~vl~ifPFE~~~y--------g-  143 (347)
T PRK14089         75 KQADKVLLMDSSSFNIPLAKKIKKAYP--KKEIIYYILPQVWAWKKGRAKILEKYCDFLASILPFEVQFY--------Q-  143 (347)
T ss_pred             cCCCEEEEeCCCCCCHHHHHHHHhcCC--CCCEEEEECccceeeCcchHHHHHHHHhhhhccCCCCHHHh--------C-
Confidence            799999987643 22223333332211  13555555543334444555566678888888776555544        2 


Q ss_pred             cCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCC
Q 017085          135 KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVP  214 (377)
Q Consensus       135 ~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~  214 (377)
                        .++..+.|++-... ...             +..  ++++..+.++.|+-.  .-+..++..+.+..+++++     .
T Consensus       144 --~~~~~VGhPl~d~~-~~~-------------~~~--~~~~~~I~llPGSR~--~Ei~~llP~~~~aa~~L~~-----~  198 (347)
T PRK14089        144 --SKATYVGHPLLDEI-KEF-------------KKD--LDKEGTIAFMPGSRK--SEIKRLMPIFKELAKKLEG-----K  198 (347)
T ss_pred             --CCCEEECCcHHHhh-hhh-------------hhh--cCCCCEEEEECCCCH--HHHHHHHHHHHHHHHHHhh-----c
Confidence              34667877763321 110             011  223455666666432  1222333333333334433     2


Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEE
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLG  294 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~  294 (377)
                      ...+++.|...      .+.+++...+.   ..+.+.+   +..++|+.||+.+..|       |++.+|++.+|+|.|+
T Consensus       199 ~~~~~i~~a~~------~~~i~~~~~~~---~~~~~~~---~~~~~m~~aDlal~~S-------GT~TLE~al~g~P~Vv  259 (347)
T PRK14089        199 EKILVVPSFFK------GKDLKEIYGDI---SEFEISY---DTHKALLEAEFAFICS-------GTATLEAALIGTPFVL  259 (347)
T ss_pred             CcEEEEeCCCc------HHHHHHHHhcC---CCcEEec---cHHHHHHhhhHHHhcC-------cHHHHHHHHhCCCEEE
Confidence            26777777642      24555544432   2344553   6678999999998666       7888899999999997


Q ss_pred             e
Q 017085          295 T  295 (377)
Q Consensus       295 s  295 (377)
                      .
T Consensus       260 ~  260 (347)
T PRK14089        260 A  260 (347)
T ss_pred             E
Confidence            5

>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like

Probab=98.46  E-value=6.7e-07  Score=69.10  Aligned_cols=83  Identities=24%  Similarity=0.233  Sum_probs=51.6

Q ss_pred             CcHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEE-------------ccchhHHHhhhcccEEEEcCch
Q 017085            1 MELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS-------------AKGQETINTALKADLIVLNTAV   67 (377)
Q Consensus         1 ~~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~Div~~~~~~   67 (377)
                      +++++.|.+.||||++++...+......         ..++.+..             .....+++++.+||+||+|...
T Consensus        14 ~~~~~~L~~~g~~V~ii~~~~~~~~~~~---------~~~i~~~~~~~~~k~~~~~~~~~~l~k~ik~~~~DvIh~h~~~   84 (139)
T PF13477_consen   14 YNLAKELKKRGYDVHIITPRNDYEKYEI---------IEGIKVIRLPSPRKSPLNYIKYFRLRKIIKKEKPDVIHCHTPS   84 (139)
T ss_pred             HHHHHHHHHCCCEEEEEEcCCCchhhhH---------hCCeEEEEecCCCCccHHHHHHHHHHHHhccCCCCEEEEecCC
Confidence            3689999999999999998654322211         12222221             2245566788999999999976


Q ss_pred             hhhHHHHHhhcCCCccccceeEEeeee
Q 017085           68 AGKWLDAVLKEDVPRVLPNVLWWIHEM   94 (377)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~v~~~h~~   94 (377)
                      +...+..++.. ... .+|++++.|+.
T Consensus        85 ~~~~~~~l~~~-~~~-~~~~i~~~hg~  109 (139)
T PF13477_consen   85 PYGLFAMLAKK-LLK-NKKVIYTVHGS  109 (139)
T ss_pred             hHHHHHHHHHH-HcC-CCCEEEEecCC
Confidence            53333333221 111 14889999975

>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=98.34  E-value=7.1e-05  Score=62.38  Aligned_cols=135  Identities=17%  Similarity=0.198  Sum_probs=81.8

Q ss_pred             EEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEE-EecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCH
Q 017085          179 LFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTV  257 (377)
Q Consensus       179 ~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i-~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~  257 (377)
                      +++..|.-+ .|++  .+++++.+.+         .++.+.| +|.+.    +..+.+++.++..   +++.+.-..+++
T Consensus       161 ilI~lGGsD-pk~l--t~kvl~~L~~---------~~~nl~iV~gs~~----p~l~~l~k~~~~~---~~i~~~~~~~dm  221 (318)
T COG3980         161 ILITLGGSD-PKNL--TLKVLAELEQ---------KNVNLHIVVGSSN----PTLKNLRKRAEKY---PNINLYIDTNDM  221 (318)
T ss_pred             EEEEccCCC-hhhh--HHHHHHHhhc---------cCeeEEEEecCCC----cchhHHHHHHhhC---CCeeeEecchhH
Confidence            344445433 3543  4555554433         3455654 45443    3456666666665   588888888999


Q ss_pred             HHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEE----eCCCCcccceecCcceeeecCC--CCChhHHHHHHHHHh
Q 017085          258 APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLG----TAAGGTTEIVVNGTTGLLHPVG--KEGITPLAKNIVKLA  331 (377)
Q Consensus       258 ~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~----s~~~~~~e~~~~~~~g~~~~~~--~~~~~~la~~i~~l~  331 (377)
                      +.+|..||+.+..       -|.++.||+..|+|.++    .+....+..+..  .|.....+  . ........+.++.
T Consensus       222 a~LMke~d~aI~A-------aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~--lg~~~~l~~~l-~~~~~~~~~~~i~  291 (318)
T COG3980         222 AELMKEADLAISA-------AGSTLYEALLLGVPSLVLPLAENQIATAKEFEA--LGIIKQLGYHL-KDLAKDYEILQIQ  291 (318)
T ss_pred             HHHHHhcchheec-------cchHHHHHHHhcCCceEEeeeccHHHHHHHHHh--cCchhhccCCC-chHHHHHHHHHhh
Confidence            9999999998742       37799999999999433    333333332211  22222221  1 1466777778888


Q ss_pred             hCHHHHHHHHH
Q 017085          332 THVERRLTMGK  342 (377)
Q Consensus       332 ~~~~~~~~~~~  342 (377)
                      +|+..+..+..
T Consensus       292 ~d~~~rk~l~~  302 (318)
T COG3980         292 KDYARRKNLSF  302 (318)
T ss_pred             hCHHHhhhhhh
Confidence            88876665544

>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=98.33  E-value=8.4e-05  Score=68.45  Aligned_cols=236  Identities=16%  Similarity=0.154  Sum_probs=151.1

Q ss_pred             ccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhh--hHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEec
Q 017085          107 LPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKE--LMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN  184 (377)
Q Consensus       107 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~--~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G  184 (377)
                      ...+|++++.+...--.+.+...+++-.- +.+..+...-...  ...+.         ....|.+++++++.+++..+.
T Consensus       697 a~~mDYiITDs~tsPl~~a~~ysEkLv~l-Ph~ffi~d~~qk~~~~~dpn---------~kP~r~~y~Lp~d~vvf~~FN  766 (966)
T KOG4626|consen  697 ATFMDYIITDSVTSPLELAQQYSEKLVYL-PHCFFIGDHKQKNQDVLDPN---------NKPTRSQYGLPEDAVVFCNFN  766 (966)
T ss_pred             CceeeEEeecccCChHHHHHHHHHHHhhC-CceEEecCcccccccccCCC---------CCCCCCCCCCCCCeEEEeech
Confidence            45678899888766655555444444322 3355554332211  11110         113688999999988887666


Q ss_pred             cccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCC-CcEEEecCc--CCHHHHH
Q 017085          185 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ-DRVHFVNKT--LTVAPYL  261 (377)
Q Consensus       185 ~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~-~~v~~~g~~--~~~~~~~  261 (377)
                      .+  .|=-...++.|.++++       +-|+-.|++.--...    -..+++..+.++|++ ++|+|..-.  +|-..-.
T Consensus       767 qL--yKidP~~l~~W~~ILk-------~VPnS~LwllrfPa~----ge~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~  833 (966)
T KOG4626|consen  767 QL--YKIDPSTLQMWANILK-------RVPNSVLWLLRFPAV----GEQRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRG  833 (966)
T ss_pred             hh--hcCCHHHHHHHHHHHH-------hCCcceeEEEecccc----chHHHHHHHHHhCCCccceeeccccchHHHHHhh
Confidence            54  3545567888888766       347777777654321    237889999999985 567777643  5555667


Q ss_pred             HhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccce-----ecCcceeeecCCCCChhHHHHHHHHHhhCHHH
Q 017085          262 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIV-----VNGTTGLLHPVGKEGITPLAKNIVKLATHVER  336 (377)
Q Consensus       262 ~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~-----~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~  336 (377)
                      +.+||.+-+-.   -..-++-+|.+.+|+|+|+-.....+.-+     ..-+.|-++.. +  .++..+.-.++-+|.+.
T Consensus       834 ~LaDv~LDTpl---cnGhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak-~--~eEY~~iaV~Latd~~~  907 (966)
T KOG4626|consen  834 QLADVCLDTPL---CNGHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAK-N--REEYVQIAVRLATDKEY  907 (966)
T ss_pred             hhhhhcccCcC---cCCcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhh-h--HHHHHHHHHHhhcCHHH
Confidence            88999986543   22346778999999999975322111111     11123333322 2  78888888899999998


Q ss_pred             HHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHHHhc
Q 017085          337 RLTMGKRGYERVK--EIFQEHHMAERIAVVLKEVLKK  371 (377)
Q Consensus       337 ~~~~~~~~~~~~~--~~f~~~~~~~~~~~~~~~~~~~  371 (377)
                      ...++..-|+.-.  --|+-..++..++.+|.+.-+.
T Consensus       908 L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~  944 (966)
T KOG4626|consen  908 LKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKK  944 (966)
T ss_pred             HHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHH
Confidence            8888877766322  2488999999999999887653

>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]

Probab=98.33  E-value=1e-05  Score=77.06  Aligned_cols=142  Identities=23%  Similarity=0.181  Sum_probs=109.4

Q ss_pred             CCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHH----HHhcCCCCcE
Q 017085          173 VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNY----VMQKKIQDRV  248 (377)
Q Consensus       173 ~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~----~~~~~~~~~v  248 (377)
                      ++++.+.++++-|+...|+....+.-+..+...+++.  ..|.+.+++.|...|.+. ..+.+.++    ++..+...+|
T Consensus       483 ~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d--~~prv~~iFaGKAhP~y~-~aK~iIk~I~~~a~~in~~lkV  559 (750)
T COG0058         483 VDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKED--WVPRVQIIFAGKAHPADY-AAKEIIKLINDVADVINNKLKV  559 (750)
T ss_pred             cCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcC--CCCceEEEEeccCCCcch-HHHHHHHHHHHHHHhhcccceE
Confidence            4567789999999999999999887777777777731  346677788888766542 33444333    3444444578


Q ss_pred             EEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCccccee--cCcceeeecCCC
Q 017085          249 HFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVV--NGTTGLLHPVGK  317 (377)
Q Consensus       249 ~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~--~~~~g~~~~~~~  317 (377)
                      .|+..-  .-...++.+|||-...|....|.+|++-+-+|.-|.+-|+|--|...|+.+  .+.|||++..+.
T Consensus       560 vFl~nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~  632 (750)
T COG0058         560 VFLPNYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETV  632 (750)
T ss_pred             EEeCCCChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCch
Confidence            888864  334456799999998888779999999999999999999999899999886  788999998754

>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases

Probab=98.23  E-value=7.6e-06  Score=65.17  Aligned_cols=131  Identities=16%  Similarity=0.135  Sum_probs=77.9

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEcc------------chhHHH------hh--hcccEE
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK------------GQETIN------TA--LKADLI   61 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~------~~--~~~Div   61 (377)
                      +|+..|.++|++|+|+|.....+..        ...-+|++++..+            .+..+.      +.  .+.|+|
T Consensus        25 ~L~~~l~~~g~~v~Vyc~~~~~~~~--------~~~y~gv~l~~i~~~~~g~~~si~yd~~sl~~al~~~~~~~~~~~ii   96 (185)
T PF09314_consen   25 ELAPRLVSKGIDVTVYCRSDYYPYK--------EFEYNGVRLVYIPAPKNGSAESIIYDFLSLLHALRFIKQDKIKYDII   96 (185)
T ss_pred             HHHHHHhcCCceEEEEEccCCCCCC--------CcccCCeEEEEeCCCCCCchHHHHHHHHHHHHHHHHHhhccccCCEE
Confidence            5788899999999999976543211        1112344443211            011111      11  257899


Q ss_pred             EEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc-----cchhh-----hccccccceeeeeccchhhHhhhhhhhh
Q 017085           62 VLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-----FKLDY-----VKHLPLVAGAMIDSHVTAEYWKNRTRER  131 (377)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~-----~~~~~-----~~~~~~~~~~~~~s~~~~~~~~~~~~~~  131 (377)
                      +++....+.++....+ .++....+++...|+.....     +.+.+     +...+.+|.++++|..+.+++.+    +
T Consensus        97 ~ilg~~~g~~~~~~~r-~~~~~g~~v~vN~DGlEWkR~KW~~~~k~~lk~~E~~avk~ad~lIaDs~~I~~y~~~----~  171 (185)
T PF09314_consen   97 LILGYGIGPFFLPFLR-KLRKKGGKVVVNMDGLEWKRAKWGRPAKKYLKFSEKLAVKYADRLIADSKGIQDYIKE----R  171 (185)
T ss_pred             EEEcCCccHHHHHHHH-hhhhcCCcEEECCCcchhhhhhcCHHHHHHHHHHHHHHHHhCCEEEEcCHHHHHHHHH----H
Confidence            9988663333333332 12222347888888764321     11112     23346889999999999999988    4


Q ss_pred             hhccCCCeEEEEcCCh
Q 017085          132 LRIKMPDTYVVHLGNS  147 (377)
Q Consensus       132 ~~~~~~~~~vi~ngi~  147 (377)
                      ++  ..+..+|++|.|
T Consensus       172 y~--~~~s~~IaYGad  185 (185)
T PF09314_consen  172 YG--RKKSTFIAYGAD  185 (185)
T ss_pred             cC--CCCcEEecCCCC
Confidence            54  467899999975

>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=98.20  E-value=1.2e-06  Score=70.05  Aligned_cols=93  Identities=18%  Similarity=0.199  Sum_probs=64.9

Q ss_pred             CcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC--------cccceecCcceeeecCCC
Q 017085          246 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG--------TTEIVVNGTTGLLHPVGK  317 (377)
Q Consensus       246 ~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~--------~~e~~~~~~~g~~~~~~~  317 (377)
                      .++.+.++.+++.++|+.||+++.      -+.+.++.|++++|+|.|.-...+        ....+.+...|..+...+
T Consensus        55 ~~v~~~~~~~~m~~~m~~aDlvIs------~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~  128 (167)
T PF04101_consen   55 PNVKVFGFVDNMAELMAAADLVIS------HAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESE  128 (167)
T ss_dssp             CCCEEECSSSSHHHHHHHHSEEEE------CS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC
T ss_pred             CcEEEEechhhHHHHHHHcCEEEe------CCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCccc
Confidence            589999999999999999999883      334679999999999998776554        222233344566665544


Q ss_pred             CChhHHHHHHHHHhhCHHHHHHHHHHH
Q 017085          318 EGITPLAKNIVKLATHVERRLTMGKRG  344 (377)
Q Consensus       318 ~~~~~la~~i~~l~~~~~~~~~~~~~~  344 (377)
                      .+.+.|.++|..+++++.....+..++
T Consensus       129 ~~~~~L~~~i~~l~~~~~~~~~~~~~~  155 (167)
T PF04101_consen  129 LNPEELAEAIEELLSDPEKLKEMAKAA  155 (167)
T ss_dssp             -SCCCHHHHHHCHCCCHH-SHHHCCCH
T ss_pred             CCHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence            347899999999999988766655443

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.

>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional

Probab=98.18  E-value=6.5e-05  Score=70.74  Aligned_cols=139  Identities=14%  Similarity=0.069  Sum_probs=90.3

Q ss_pred             CCCeEEEEecccccc-----chhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEE
Q 017085          175 NEDLLFAIINSVSRG-----KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH  249 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~-----Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~  249 (377)
                      ++..+++..|.....     +-...++++++.+           + .++++..++..     ..        .++++||.
T Consensus       295 ~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l-----------~-~~viw~~~~~~-----~~--------~~~p~Nv~  349 (507)
T PHA03392        295 TNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL-----------P-YNVLWKYDGEV-----EA--------INLPANVL  349 (507)
T ss_pred             CCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhC-----------C-CeEEEEECCCc-----Cc--------ccCCCceE
Confidence            334777778886432     2234444444422           4 57777655411     10        23578999


Q ss_pred             EecCcCCHHHHH--HhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCC----CCcccceecCcceeeecCCCCChhHH
Q 017085          250 FVNKTLTVAPYL--AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA----GGTTEIVVNGTTGLLHPVGKEGITPL  323 (377)
Q Consensus       250 ~~g~~~~~~~~~--~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~----~~~~e~~~~~~~g~~~~~~~~~~~~l  323 (377)
                      +.++.. -.+++  ..+++++      ..|...++.||+.+|+|+|+-..    ......+...+.|...+..+-+.+++
T Consensus       350 i~~w~P-q~~lL~hp~v~~fI------tHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l  422 (507)
T PHA03392        350 TQKWFP-QRAVLKHKNVKAFV------TQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQL  422 (507)
T ss_pred             EecCCC-HHHHhcCCCCCEEE------ecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHHH
Confidence            999863 35677  4588888      34456789999999999998753    33445555566888777655458999


Q ss_pred             HHHHHHHhhCHHHHHHHHHHHH
Q 017085          324 AKNIVKLATHVERRLTMGKRGY  345 (377)
Q Consensus       324 a~~i~~l~~~~~~~~~~~~~~~  345 (377)
                      .++|.++++|+..+++..+-+.
T Consensus       423 ~~ai~~vl~~~~y~~~a~~ls~  444 (507)
T PHA03392        423 VLAIVDVIENPKYRKNLKELRH  444 (507)
T ss_pred             HHHHHHHhCCHHHHHHHHHHHH
Confidence            9999999999875554444333

>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]

Probab=98.15  E-value=0.00011  Score=67.23  Aligned_cols=159  Identities=13%  Similarity=0.104  Sum_probs=102.0

Q ss_pred             CCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcC
Q 017085          176 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL  255 (377)
Q Consensus       176 ~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~  255 (377)
                      .+++.+..|.....   ..+++.+.+   .+.+     -+.++++...+..      .      ..-++++|+...++..
T Consensus       237 ~~~vyvslGt~~~~---~~l~~~~~~---a~~~-----l~~~vi~~~~~~~------~------~~~~~p~n~~v~~~~p  293 (406)
T COG1819         237 RPIVYVSLGTVGNA---VELLAIVLE---ALAD-----LDVRVIVSLGGAR------D------TLVNVPDNVIVADYVP  293 (406)
T ss_pred             CCeEEEEcCCcccH---HHHHHHHHH---HHhc-----CCcEEEEeccccc------c------ccccCCCceEEecCCC
Confidence            44555566765443   344443333   3322     5677777665411      0      1235678999999873


Q ss_pred             CHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCC----CCcccceecCcceeeecCCCCChhHHHHHHHHHh
Q 017085          256 TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA----GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLA  331 (377)
Q Consensus       256 ~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~----~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~  331 (377)
                       ...++..||+++..      |...++.||+.+|+|+|+-..    ...++.++.-+.|...+......+.++++|.+++
T Consensus       294 -~~~~l~~ad~vI~h------GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL  366 (406)
T COG1819         294 -QLELLPRADAVIHH------GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRAAVNEVL  366 (406)
T ss_pred             -HHHHhhhcCEEEec------CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHHh
Confidence             44699999999953      345689999999999998743    3456667677788888753334999999999999


Q ss_pred             hCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017085          332 THVERRLTMGKRGYERVKEIFQEHHMAERIAVVL  365 (377)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~  365 (377)
                      +|+..++...+... .+.+.-....+++.++++.
T Consensus       367 ~~~~~~~~~~~~~~-~~~~~~g~~~~a~~le~~~  399 (406)
T COG1819         367 ADDSYRRAAERLAE-EFKEEDGPAKAADLLEEFA  399 (406)
T ss_pred             cCHHHHHHHHHHHH-HhhhcccHHHHHHHHHHHH
Confidence            99886555444333 3444444444444444443

>PRK14986 glycogen phosphorylase; Provisional

Probab=98.03  E-value=4.6e-05  Score=73.68  Aligned_cols=150  Identities=16%  Similarity=0.129  Sum_probs=111.1

Q ss_pred             CCCCCCeEEEEeccccccchhHH-HHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhc--------
Q 017085          172 GVRNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK--------  242 (377)
Q Consensus       172 ~~~~~~~~i~~~G~~~~~Kg~~~-ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~--------  242 (377)
                      .++++.+.++++-|+...|+..+ ++..+..+.+.+.+.+....+.++++.|...|.+. ..+.+.+++...        
T Consensus       538 ~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIk~I~~va~~in~Dp  616 (815)
T PRK14986        538 VVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYY-MAKHIIHLINDVAKVINNDP  616 (815)
T ss_pred             ccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH-HHHHHHHHHHHHHHHhccCh
Confidence            36677889999999999999999 88887766544433111123588889998777653 444554444332        


Q ss_pred             CCCC--cEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceec--CcceeeecCC
Q 017085          243 KIQD--RVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN--GTTGLLHPVG  316 (377)
Q Consensus       243 ~~~~--~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~--~~~g~~~~~~  316 (377)
                      .+.+  +|.|+..-  +-...++.+|||....|....|.+|++-+-+|.-|.+.+++--|...|+.++  ++|||.+...
T Consensus       617 ~v~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~~  696 (815)
T PRK14986        617 QIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNT  696 (815)
T ss_pred             hhcCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCCC
Confidence            2233  68888853  4455678999999988887789999999999999999999999999999876  7899999764


Q ss_pred             CCChhHHHH
Q 017085          317 KEGITPLAK  325 (377)
Q Consensus       317 ~~~~~~la~  325 (377)
                         ++++.+
T Consensus       697 ---~~ev~~  702 (815)
T PRK14986        697 ---AEEVEA  702 (815)
T ss_pred             ---HHHHHH
Confidence               444444

>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=97.99  E-value=0.00055  Score=65.50  Aligned_cols=150  Identities=15%  Similarity=0.143  Sum_probs=93.5

Q ss_pred             CCCCCCeEEEEeccccccchhHH-HHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhc--------
Q 017085          172 GVRNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK--------  242 (377)
Q Consensus       172 ~~~~~~~~i~~~G~~~~~Kg~~~-ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~--------  242 (377)
                      .++++.+..+++-|+...|+..+ ++..+....+.+...+....++++++.|...|.+. ..+++.+++.+.        
T Consensus       439 ~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~-~gK~iIk~I~~va~~in~Dp  517 (713)
T PF00343_consen  439 ELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDY-MGKEIIKLINNVAEVINNDP  517 (713)
T ss_dssp             ---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-H-HHHHHHHHHHHHHHHHCT-T
T ss_pred             CCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcH-HHHHHHHHHHHHHHHHhcCh
Confidence            35778889999999999999888 55555544433332111234688999998776653 445555554332        


Q ss_pred             CCCC--cEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceec--CcceeeecCC
Q 017085          243 KIQD--RVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN--GTTGLLHPVG  316 (377)
Q Consensus       243 ~~~~--~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~--~~~g~~~~~~  316 (377)
                      .+.+  +|.|+..-  .-...++.+|||.+..|+...|++|++-+-+|.-|.+-+++--|...|+.+.  .++.+++-..
T Consensus       518 ~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG~~  597 (713)
T PF00343_consen  518 EVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFGLT  597 (713)
T ss_dssp             TTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES-B
T ss_pred             hhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcCCC
Confidence            2334  68999864  3455678999999988887799999999999999999999988998888754  3577887643


Q ss_pred             CCChhHHHH
Q 017085          317 KEGITPLAK  325 (377)
Q Consensus       317 ~~~~~~la~  325 (377)
                         .+++.+
T Consensus       598 ---~~ev~~  603 (713)
T PF00343_consen  598 ---AEEVEE  603 (713)
T ss_dssp             ---HHHHHH
T ss_pred             ---HHHHHH
Confidence               455433

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....

>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases

Probab=97.98  E-value=4.2e-05  Score=73.68  Aligned_cols=150  Identities=17%  Similarity=0.162  Sum_probs=112.4

Q ss_pred             CCCCCCeEEEEeccccccchhHH-HHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcC-------
Q 017085          172 GVRNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK-------  243 (377)
Q Consensus       172 ~~~~~~~~i~~~G~~~~~Kg~~~-ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~-------  243 (377)
                      .++++.+..+++-|+...|+..+ ++..+..+.+.+.+......+.++++.|...|.. ...+.+.+++....       
T Consensus       522 ~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIklI~~va~~iN~Dp  600 (794)
T TIGR02093       522 EVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGY-HMAKLIIKLINSVAEVVNNDP  600 (794)
T ss_pred             ccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCc-HHHHHHHHHHHHHHHHhccCh
Confidence            35677788899999999999999 7887776664443311111357888889877765 35566666655543       


Q ss_pred             -CCC--cEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceec--CcceeeecCC
Q 017085          244 -IQD--RVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN--GTTGLLHPVG  316 (377)
Q Consensus       244 -~~~--~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~--~~~g~~~~~~  316 (377)
                       +.+  +|.|+..-  .-...++.+||+....|....|..|+.-+-+|.-|.+.++|--|...|+.++  ++|+|++...
T Consensus       601 ~v~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG~~  680 (794)
T TIGR02093       601 AVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGLT  680 (794)
T ss_pred             hhCCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcCCC
Confidence             444  68888853  4455778999999988887789999999999999999999988999998876  7899998764


Q ss_pred             CCChhHHHH
Q 017085          317 KEGITPLAK  325 (377)
Q Consensus       317 ~~~~~~la~  325 (377)
                         ++++.+
T Consensus       681 ---~~ev~~  686 (794)
T TIGR02093       681 ---VEEVEA  686 (794)
T ss_pred             ---HHHHHH
Confidence               444443

This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.

>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases

Probab=97.94  E-value=9.1e-05  Score=71.74  Aligned_cols=144  Identities=17%  Similarity=0.135  Sum_probs=108.0

Q ss_pred             CCCCCCeEEEEeccccccchhHH-HHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcC-------
Q 017085          172 GVRNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK-------  243 (377)
Q Consensus       172 ~~~~~~~~i~~~G~~~~~Kg~~~-ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~-------  243 (377)
                      .++++.+..+++-|+...|+..+ ++..+....+...+......+.++++.|...|... ..+.+.+++....       
T Consensus       525 ~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~~in~Dp  603 (797)
T cd04300         525 EVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYY-MAKLIIKLINAVADVVNNDP  603 (797)
T ss_pred             ccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcH-HHHHHHHHHHHHHHHhccCh
Confidence            35778899999999999999999 77777766544332111113478888888776653 4455555544332       


Q ss_pred             -CCC--cEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceec--CcceeeecCC
Q 017085          244 -IQD--RVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN--GTTGLLHPVG  316 (377)
Q Consensus       244 -~~~--~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~--~~~g~~~~~~  316 (377)
                       +.+  +|.|+..-  .-...++.+||+....|....|..|+.-+-+|.-|.+.++|--|...|+.++  ++|++++...
T Consensus       604 ~v~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG~~  683 (797)
T cd04300         604 DVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLT  683 (797)
T ss_pred             hcCCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeCCC
Confidence             333  68888853  4455778999999988887789999999999999999999998999998876  7899998764

It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK14985 maltodextrin phosphorylase; Provisional

Probab=97.82  E-value=8.6e-05  Score=71.55  Aligned_cols=144  Identities=15%  Similarity=0.106  Sum_probs=108.1

Q ss_pred             CCCCCCeEEEEeccccccchhHH-HHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcC-------
Q 017085          172 GVRNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK-------  243 (377)
Q Consensus       172 ~~~~~~~~i~~~G~~~~~Kg~~~-ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~-------  243 (377)
                      .++++.+..+++-|+...|+..+ ++..+..+.+...+......+.++++.|...|... ..+.+.+++....       
T Consensus       524 ~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~~in~Dp  602 (798)
T PRK14985        524 EINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY-LAKNIIFAINKVAEVINNDP  602 (798)
T ss_pred             ccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH-HHHHHHHHHHHHHHHhcCCh
Confidence            35677788999999999999999 88887766644332110113488888998777653 4555555554432       


Q ss_pred             -CCC--cEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceec--CcceeeecCC
Q 017085          244 -IQD--RVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN--GTTGLLHPVG  316 (377)
Q Consensus       244 -~~~--~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~--~~~g~~~~~~  316 (377)
                       +.+  +|.|+..-  .-...++.+||+....|....|.+|++-+-+|.-|.+.++|--|...|+.++  +.|||++...
T Consensus       603 ~v~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG~~  682 (798)
T PRK14985        603 LVGDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGHT  682 (798)
T ss_pred             hhCCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeCCC
Confidence             223  68888863  4455678999999988887789999999999999999999998998888875  7799999764

>COG4671 Predicted glycosyl transferase [General function prediction only]

Probab=97.80  E-value=0.004  Score=53.99  Aligned_cols=142  Identities=11%  Similarity=0.117  Sum_probs=84.6

Q ss_pred             CCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc
Q 017085          175 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT  254 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~  254 (377)
                      ++..+++.+|  ...-|-+ |++++......+.+.    ...-+++.|...+.  ..++.+.+.+.+   .++|.+..+.
T Consensus       218 E~~~Ilvs~G--GG~dG~e-Li~~~l~A~~~l~~l----~~~~~ivtGP~MP~--~~r~~l~~~A~~---~p~i~I~~f~  285 (400)
T COG4671         218 EGFDILVSVG--GGADGAE-LIETALAAAQLLAGL----NHKWLIVTGPFMPE--AQRQKLLASAPK---RPHISIFEFR  285 (400)
T ss_pred             ccceEEEecC--CChhhHH-HHHHHHHHhhhCCCC----CcceEEEeCCCCCH--HHHHHHHHhccc---CCCeEEEEhh
Confidence            4556777777  3445544 344433333233221    12235677876543  234444444433   3689999999


Q ss_pred             CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC--Ccccceec---Cccee--eecCCCCChhHHHHHH
Q 017085          255 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG--GTTEIVVN---GTTGL--LHPVGKEGITPLAKNI  327 (377)
Q Consensus       255 ~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~--~~~e~~~~---~~~g~--~~~~~~~~~~~la~~i  327 (377)
                      +++..|+..|+..|.-+     | =+++.|-+++|+|.+.-...  +-...+..   .+-|+  +..+.+-.++.|+++|
T Consensus       286 ~~~~~ll~gA~~vVSm~-----G-YNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al  359 (400)
T COG4671         286 NDFESLLAGARLVVSMG-----G-YNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADAL  359 (400)
T ss_pred             hhHHHHHHhhheeeecc-----c-chhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHH
Confidence            99999999999998432     2 35789999999998876533  22222221   12232  2223333488999999


Q ss_pred             HHHhhCH
Q 017085          328 VKLATHV  334 (377)
Q Consensus       328 ~~l~~~~  334 (377)
                      ..+++.|
T Consensus       360 ~~~l~~P  366 (400)
T COG4671         360 KAALARP  366 (400)
T ss_pred             HhcccCC
Confidence            9888743

>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]

Probab=97.74  E-value=0.0089  Score=58.18  Aligned_cols=193  Identities=16%  Similarity=0.072  Sum_probs=130.8

Q ss_pred             CeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeE
Q 017085          138 DTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVH  217 (377)
Q Consensus       138 ~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~  217 (377)
                      .+..+|.|++...+..............+++..+   .+..+++-+-++...||...=+.++.+++....+.   .+.+.
T Consensus       240 ~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~---~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~---~~kVv  313 (732)
T KOG1050|consen  240 SVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPF---KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEW---IDKVV  313 (732)
T ss_pred             eeeecccccchHHhhccccchhHHHHHHHHhhhc---cCCceEecccccccccCchHHHHHHHHHHHhChhh---hceEE
Confidence            4667888999888766544444344455555554   46677878889999999999899998877644332   24566


Q ss_pred             EEEEecCCCcccHHHHHHHHHHHh--------cCCC--CcEEEecC-c--CCHHHHHHhcCEEEecCCCCCCccchHHHH
Q 017085          218 AVIIGSDMNAQTKFESELRNYVMQ--------KKIQ--DRVHFVNK-T--LTVAPYLAAIDVLVQNSQAWGECFGRITIE  284 (377)
Q Consensus       218 l~i~G~~~~~~~~~~~~l~~~~~~--------~~~~--~~v~~~g~-~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~E  284 (377)
                      ++.+..+...+.+..++++..+..        .+-.  ..|+++-. .  .++.+++..+|+.+..+.  .+|..++.+|
T Consensus       314 liqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~--rdGmnl~~~e  391 (732)
T KOG1050|consen  314 LIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSW--RDGMNLVFLE  391 (732)
T ss_pred             EEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeeccc--ccccchhhhH
Confidence            666655444333333333333221        1111  22333332 2  778999999999999998  9999999999


Q ss_pred             HHHcC----CcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHH
Q 017085          285 AMAFQ----LPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGK  342 (377)
Q Consensus       285 a~a~g----~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~  342 (377)
                      +.+|.    .+.|.+...|..+...+  ...++.+.+  .++++.+|..+++.++.-.+++.
T Consensus       392 ~i~~~~~~~~~lVlsef~G~~~tl~d--~aivvnpw~--~~~~~~~i~~al~~s~~e~~~r~  449 (732)
T KOG1050|consen  392 YILCQENKKSVLVLSEFIGDDTTLED--AAIVVNPWD--GDEFAILISKALTMSDEERELRE  449 (732)
T ss_pred             HHHhhcccCCceEEeeeccccccccc--cCEEECCcc--hHHHHHHHHHHhhcCHHHHhhcc
Confidence            99885    67888887777777643  446778887  99999999999996655444444

>PRK10017 colanic acid biosynthesis protein; Provisional

Probab=97.65  E-value=0.035  Score=51.14  Aligned_cols=237  Identities=13%  Similarity=0.056  Sum_probs=119.2

Q ss_pred             ccceeEEeeeecccc---cchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhh
Q 017085           84 LPNVLWWIHEMRGHY---FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAK  160 (377)
Q Consensus        84 ~~~~v~~~h~~~~~~---~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~  160 (377)
                      ++|++.+.++..+..   ........+++++.+.+--....++++     .+|++.+++.+.+.++   +.-+.....  
T Consensus       148 gkpv~l~gqsiGPf~~~~~r~l~r~vl~~~~~ItvRD~~S~~~Lk-----~lGv~~~~v~~~aDpA---F~L~~~~~~--  217 (426)
T PRK10017        148 KKPLYMIGHSVGPFQDEQFNQLANYVFGHCDALILRESVSLDLMK-----RSNITTAKVEHGVDTA---WLVDHHTED--  217 (426)
T ss_pred             CCCEEEECCcCCCcCCHHHHHHHHHHHhcCCEEEEccHHHHHHHH-----HhCCCccceEEecChh---hhCCccccc--
Confidence            357777777663321   122333445677777666665555554     7788777777765433   221111000  


Q ss_pred             hhhHHHHHHHhCCCCCCeEEEE-ecccccc-c----hhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCC--Cc-ccHH
Q 017085          161 RVLREHVRESLGVRNEDLLFAI-INSVSRG-K----GQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDM--NA-QTKF  231 (377)
Q Consensus       161 ~~~~~~~r~~~~~~~~~~~i~~-~G~~~~~-K----g~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~--~~-~~~~  231 (377)
                      ......+...++...+..+|++ +..+.+. +    ..+...+.++++.+.+.+     .+++++++....  +. ....
T Consensus       218 ~~~~~~~~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~-----~g~~Vv~lp~~~~~~~~~~dD  292 (426)
T PRK10017        218 FTASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIID-----EGYQVIALSTCTGIDSYNKDD  292 (426)
T ss_pred             cccchhhhhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHH-----CCCeEEEEecccCccCCCCch
Confidence            0000011111222222334433 3333221 1    123344555555555544     245555554321  00 0112


Q ss_pred             HHHHHHHHHhcCCCCcEEEec-C--cCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC-Ccccceec-
Q 017085          232 ESELRNYVMQKKIQDRVHFVN-K--TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG-GTTEIVVN-  306 (377)
Q Consensus       232 ~~~l~~~~~~~~~~~~v~~~g-~--~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~-~~~e~~~~-  306 (377)
                      ..-..+..+.+.-+.+++++. .  ..++..+++.||+++..=.       ..++=|+++|+|+|+-... -...++.+ 
T Consensus       293 ~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~Rl-------Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~l  365 (426)
T PRK10017        293 RMVALNLRQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRL-------HSAIISMNFGTPAIAINYEHKSAGIMQQL  365 (426)
T ss_pred             HHHHHHHHHhcccccceeEecCCCChHHHHHHHhhCCEEEEecc-------hHHHHHHHcCCCEEEeeehHHHHHHHHHc
Confidence            232344444444344444432 1  2567799999999875332       2567799999999987532 23333322 


Q ss_pred             CcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHH
Q 017085          307 GTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGK  342 (377)
Q Consensus       307 ~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~  342 (377)
                      +...++++..+.+.+++.+.+.+++++.+..++.-.
T Consensus       366 g~~~~~~~~~~l~~~~Li~~v~~~~~~r~~~~~~l~  401 (426)
T PRK10017        366 GLPEMAIDIRHLLDGSLQAMVADTLGQLPALNARLA  401 (426)
T ss_pred             CCccEEechhhCCHHHHHHHHHHHHhCHHHHHHHHH
Confidence            222344544443478899999999998876554433

>PLN02670 transferase, transferring glycosyl groups

Probab=97.56  E-value=0.0039  Score=58.08  Aligned_cols=116  Identities=13%  Similarity=0.088  Sum_probs=73.3

Q ss_pred             EEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC----CCCcccceecCcceeeecCCC----CC
Q 017085          248 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA----AGGTTEIVVNGTTGLLHPVGK----EG  319 (377)
Q Consensus       248 v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~----~~~~~e~~~~~~~g~~~~~~~----~~  319 (377)
                      +++.++..+. ++++...+..+-|.    +.-++++||+++|+|+|+-.    .......+...+.|..+...+    -+
T Consensus       341 ~vv~~W~PQ~-~IL~H~~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~  415 (472)
T PLN02670        341 MIHVGWVPQV-KILSHESVGGFLTH----CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFT  415 (472)
T ss_pred             eEEeCcCCHH-HHhcCcccceeeec----CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCc
Confidence            6667876443 67877777444443    34578999999999999864    444444555556777664311    23


Q ss_pred             hhHHHHHHHHHhhCHHHHHHHHHHHH---HHHHHhcCHHHHHHHHHHHHHHHH
Q 017085          320 ITPLAKNIVKLATHVERRLTMGKRGY---ERVKEIFQEHHMAERIAVVLKEVL  369 (377)
Q Consensus       320 ~~~la~~i~~l~~~~~~~~~~~~~~~---~~~~~~f~~~~~~~~~~~~~~~~~  369 (377)
                      .+++++++.+++.+++ -.+++++++   +.+.++=..+.+++.+++.+.+..
T Consensus       416 ~e~i~~av~~vm~~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~  467 (472)
T PLN02670        416 SDSVAESVRLAMVDDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENR  467 (472)
T ss_pred             HHHHHHHHHHHhcCcc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence            7999999999997652 123334443   334444556666666666655543

>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule

Probab=97.53  E-value=0.00085  Score=63.79  Aligned_cols=147  Identities=15%  Similarity=0.108  Sum_probs=86.0

Q ss_pred             HHHHHHhCC-CCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcC
Q 017085          165 EHVRESLGV-RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK  243 (377)
Q Consensus       165 ~~~r~~~~~-~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~  243 (377)
                      +++.+.+.- ..+..+++..|+... ...+..++++.+..+       +.+. ++++.-++..     ..         .
T Consensus       264 ~~~~~~~~~~~~~~vv~vsfGs~~~-~~~~~~~~~~~~~~~-------~~~~-~~iW~~~~~~-----~~---------~  320 (500)
T PF00201_consen  264 EELWNFLDSSGKKGVVYVSFGSIVS-SMPEEKLKEIAEAFE-------NLPQ-RFIWKYEGEP-----PE---------N  320 (500)
T ss_dssp             HHHHHHTSTTTTTEEEEEE-TSSST-T-HHHHHHHHHHHHH-------CSTT-EEEEEETCSH-----GC---------H
T ss_pred             cccchhhhccCCCCEEEEecCcccc-hhHHHHHHHHHHHHh-------hCCC-cccccccccc-----cc---------c
Confidence            334444433 245567777888753 234444444444333       2255 7777665521     11         1


Q ss_pred             CCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCC----CCcccceecCcceeeecCCCCC
Q 017085          244 IQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA----GGTTEIVVNGTTGLLHPVGKEG  319 (377)
Q Consensus       244 ~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~----~~~~e~~~~~~~g~~~~~~~~~  319 (377)
                      +++|+.+..+..+ .++|+...+-++-+.    |.-+++.||+.+|+|+|+-..    ......+++.+.|...+..+-+
T Consensus       321 l~~n~~~~~W~PQ-~~lL~hp~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~  395 (500)
T PF00201_consen  321 LPKNVLIVKWLPQ-NDLLAHPRVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLT  395 (500)
T ss_dssp             HHTTEEEESS--H-HHHHTSTTEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-S
T ss_pred             ccceEEEeccccc-hhhhhcccceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCc
Confidence            2357888888754 377876665444343    446789999999999999753    3345555566678888766555


Q ss_pred             hhHHHHHHHHHhhCHHHHHH
Q 017085          320 ITPLAKNIVKLATHVERRLT  339 (377)
Q Consensus       320 ~~~la~~i~~l~~~~~~~~~  339 (377)
                      .+++.++|.++++|+...+.
T Consensus       396 ~~~l~~ai~~vl~~~~y~~~  415 (500)
T PF00201_consen  396 EEELRAAIREVLENPSYKEN  415 (500)
T ss_dssp             HHHHHHHHHHHHHSHHHHHH
T ss_pred             HHHHHHHHHHHHhhhHHHHH
Confidence            89999999999999864433

This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....

>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E

Probab=97.33  E-value=0.031  Score=46.90  Aligned_cols=299  Identities=10%  Similarity=0.041  Sum_probs=131.0

Q ss_pred             hHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEccchhHHH-hhhcccEEEEcCchhhhHHHHH------hh
Q 017085            5 FLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN-TALKADLIVLNTAVAGKWLDAV------LK   77 (377)
Q Consensus         5 ~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Div~~~~~~~~~~~~~~------~~   77 (377)
                      ....+.||+++++......-..    .-.+......++.+......... +.+++||+.+++..+...-.+.      +.
T Consensus        12 ~wf~KNg~~~~i~~a~e~sftR----~dsH~~~~~si~k~~~~e~de~v~~vN~yDI~m~nSvPa~~vqE~~iNnY~kii   87 (355)
T PF11440_consen   12 DWFDKNGVEFTIVSADEKSFTR----PDSHDSKSFSIPKYLAKEYDETVKKVNDYDIVMFNSVPATKVQEAIINNYEKII   87 (355)
T ss_dssp             HHHHHTT-EEEEEEETSS--TT----TTSSS-TTTEEEE-TTTHHHHHHHHHTSSSEEEEEE--BTTS-HHHHHHHHHHH
T ss_pred             HHHHhcCCeeEEEEecccccCC----ccccccceeeeehhhHHHHHHHHHHhhccCEEEEecccCchHHHHHHHHHHHHH
Confidence            4456899999999866543111    11112222344445444554444 4478999999984422111111      11


Q ss_pred             cCCCccccceeEEeeeecccccc--hhhhccccccceeeeeccchhhHhhhhhhh-hhhc---cCCCeEEEEcCChhhhH
Q 017085           78 EDVPRVLPNVLWWIHEMRGHYFK--LDYVKHLPLVAGAMIDSHVTAEYWKNRTRE-RLRI---KMPDTYVVHLGNSKELM  151 (377)
Q Consensus        78 ~~~~~~~~~~v~~~h~~~~~~~~--~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~---~~~~~~vi~ngi~~~~~  151 (377)
                      ..+..- .++|...|+.......  ..+...++.+|.|.+.+...  ++.+.+++ .+.-   ..+++..+|.....+..
T Consensus        88 ~~Ik~~-ik~V~~~Hdh~~lsI~rn~~le~~m~~~DvIfshs~~g--~f~kv~m~~l~Ps~~~l~~~i~~~p~v~nfqpp  164 (355)
T PF11440_consen   88 KKIKPS-IKVVGFMHDHNKLSIDRNPYLEGTMNEMDVIFSHSDNG--WFSKVLMKELLPSKVSLFDRIKKFPMVFNFQPP  164 (355)
T ss_dssp             HCS-TT-SEEEEEE---SHHHHTTBSSHHHHHHH-SEEEES-TTS--HHHHTHHHHHS-SS--SSS-------EEE----
T ss_pred             Hhcccc-ceeEEEeeccceeeccccccHHHHHHhhcEEEeccccc--hHHHHHHHhhccccCchhhhhhhcceeeecCCc
Confidence            122111 2456778876322221  22344567888888877633  22222221 1111   12344444433322211


Q ss_pred             HHhhhhhhhhhhHHHHHHHhCCCCCCeEE---EEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcc
Q 017085          152 EVAEDNVAKRVLREHVRESLGVRNEDLLF---AIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ  228 (377)
Q Consensus       152 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~i---~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~  228 (377)
                      .+          -...|+.+-.+...+..   .|+||....||+..+++..++.   |+.     ++..-++-|-.... 
T Consensus       165 ~~----------i~~~Rstywkd~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~---lK~-----~~~~t~~~GierS~-  225 (355)
T PF11440_consen  165 MD----------INKYRSTYWKDVSEKNMNVNRYIGRQTTWKGPRRMFDLHEKI---LKP-----AGFKTIMEGIERSP-  225 (355)
T ss_dssp             B-----------HHHHHHHH---GGGSEEEEEEEE--SSGGG-HHHHHHHHHHT---TTT-----TT-EEEEE---SST-
T ss_pred             cc----------HHHHHHHHhhhhHhhhcccceeeeeeeeecCcHHHhhhHHHh---cCC-----cchhHHhhhhhcCC-
Confidence            00          12345555444455555   7999999999999999988764   332     67787787754321 


Q ss_pred             cHHHHHHHHH-----------HHhcCC--CCcEEEecCc--CCHHHHHHhcCEEEecCCC----CCCccchHHHHHHHcC
Q 017085          229 TKFESELRNY-----------VMQKKI--QDRVHFVNKT--LTVAPYLAAIDVLVQNSQA----WGECFGRITIEAMAFQ  289 (377)
Q Consensus       229 ~~~~~~l~~~-----------~~~~~~--~~~v~~~g~~--~~~~~~~~~adv~l~ps~~----~~e~~~~~~~Ea~a~g  289 (377)
                       +... +.+.           +.+..+  ...+.++|.-  ++..+.|+.+-+...-+..    ..+.+-.+-+|..|||
T Consensus       226 -A~~~-i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~G  303 (355)
T PF11440_consen  226 -AKIS-IKDHGIPYEYYPKLDCDEPKPAPNSPVPVYGPYIRSEGLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVG  303 (355)
T ss_dssp             -HHHH-HHHTT--EEEE-CTGGGG---SSS--EEEESS--HHHHHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCT
T ss_pred             -ceee-eecCCcccccCccccccCcccCCCCcceecchhhhHHHHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeec
Confidence             1211 1111           001111  1236777753  7888999998887654332    1334678899999999


Q ss_pred             CcEE-EeCCCCcc-------cceecCcceeeecCCCCChhHHHHHHHHHhhC
Q 017085          290 LPVL-GTAAGGTT-------EIVVNGTTGLLHPVGKEGITPLAKNIVKLATH  333 (377)
Q Consensus       290 ~PvI-~s~~~~~~-------e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~  333 (377)
                      +-.| -..+|...       -++.+.-..+.++..|  .++-.+.|.++.++
T Consensus       304 tIPVF~k~~GEN~r~~~D~~~~~~~~~~~I~~De~d--le~T~ekl~E~a~~  353 (355)
T PF11440_consen  304 TIPVFDKSWGENNRFTLDGTRYIDHPYSAIYFDEND--LESTVEKLIEVANN  353 (355)
T ss_dssp             SEEEEEHHHHHHSB-TTTSSBGGSS--S-EEE-TTS--HHHHHHHHHHHHT-
T ss_pred             eeeeeeccccccceeeecCceeeccCcceeEeccch--HHHHHHHHHHHhcc
Confidence            7555 33333222       2232333345555544  56656666555443

coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.

>PLN02448 UDP-glycosyltransferase family protein

Probab=97.33  E-value=0.01  Score=55.61  Aligned_cols=146  Identities=16%  Similarity=0.096  Sum_probs=83.3

Q ss_pred             CCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc
Q 017085          175 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT  254 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~  254 (377)
                      +...+++..|..... ..+.+-+.+.    .|.+     .+..++++..+.      ...+.+..     .+++.+.++.
T Consensus       273 ~~~vvyvsfGs~~~~-~~~~~~~~~~----~l~~-----~~~~~lw~~~~~------~~~~~~~~-----~~~~~v~~w~  331 (459)
T PLN02448        273 EGSVLYVSLGSFLSV-SSAQMDEIAA----GLRD-----SGVRFLWVARGE------ASRLKEIC-----GDMGLVVPWC  331 (459)
T ss_pred             CCceEEEeecccccC-CHHHHHHHHH----HHHh-----CCCCEEEEEcCc------hhhHhHhc-----cCCEEEeccC
Confidence            345677777876431 2222222222    2222     567888776542      11122221     2467777876


Q ss_pred             CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC----CCCcccceecC-cceeeecC-----CCCChhHHH
Q 017085          255 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA----AGGTTEIVVNG-TTGLLHPV-----GKEGITPLA  324 (377)
Q Consensus       255 ~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~----~~~~~e~~~~~-~~g~~~~~-----~~~~~~~la  324 (377)
                      . -.++++..++..+-+    .+..++++||+++|+|+|+-.    .......+.+. +.|+-+..     +..+.++++
T Consensus       332 p-Q~~iL~h~~v~~fvt----HgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~  406 (459)
T PLN02448        332 D-QLKVLCHSSVGGFWT----HCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIA  406 (459)
T ss_pred             C-HHHHhccCccceEEe----cCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHH
Confidence            3 346788888744333    334568999999999999864    44444555442 45665531     111379999


Q ss_pred             HHHHHHhhCH-HHHHHHHHHHHH
Q 017085          325 KNIVKLATHV-ERRLTMGKRGYE  346 (377)
Q Consensus       325 ~~i~~l~~~~-~~~~~~~~~~~~  346 (377)
                      +++.+++.++ +.-+++++++.+
T Consensus       407 ~av~~vl~~~~~~~~~~r~~a~~  429 (459)
T PLN02448        407 ELVKRFMDLESEEGKEMRRRAKE  429 (459)
T ss_pred             HHHHHHhcCCchhHHHHHHHHHH
Confidence            9999999864 334455555443

>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins

Probab=97.27  E-value=0.098  Score=46.07  Aligned_cols=198  Identities=15%  Similarity=0.035  Sum_probs=105.3

Q ss_pred             hhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhc
Q 017085           55 ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRI  134 (377)
Q Consensus        55 ~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  134 (377)
                      ...||+|+..+..+......+.+..- . .++.|...+   +...       ...+|.++++.+.-..            
T Consensus        55 ~~~pdLiIsaGr~t~~~~~~l~r~~g-g-~~~~V~i~~---P~~~-------~~~FDlvi~p~HD~~~------------  110 (311)
T PF06258_consen   55 PPWPDLIISAGRRTAPAALALRRASG-G-RTKTVQIMD---PRLP-------PRPFDLVIVPEHDRLP------------  110 (311)
T ss_pred             CCCCcEEEECCCchHHHHHHHHHHcC-C-CceEEEEcC---CCCC-------ccccCEEEECcccCcC------------
Confidence            36799999998766554444333111 0 012333222   2111       3566888887765211            


Q ss_pred             cCCCeEE---EEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccc--hhHHHHHHHHHHHHHHhhh
Q 017085          135 KMPDTYV---VHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGK--GQDLFLHSFYESLELIKEK  209 (377)
Q Consensus       135 ~~~~~~v---i~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~K--g~~~ll~a~~~l~~~l~~~  209 (377)
                      ..+++..   .+|.++.......         +..+...++-.+.+.+.+.+|.-+..-  +.+..-+.+..+.+..++ 
T Consensus       111 ~~~Nvl~t~ga~~~i~~~~l~~a---------~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~-  180 (311)
T PF06258_consen  111 RGPNVLPTLGAPNRITPERLAEA---------AAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAA-  180 (311)
T ss_pred             CCCceEecccCCCcCCHHHHHHH---------HHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHh-
Confidence            1233333   3355555443322         334445555445556666667533222  333223333333333332 


Q ss_pred             cccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHH
Q 017085          210 KLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMA  287 (377)
Q Consensus       210 ~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a  287 (377)
                          .+..+.|..+..-.. +..+.|.+..+   -...+.+....  +-+..+|+.||.++.+..     .-..+.||++
T Consensus       181 ----~~~~~~vttSRRTp~-~~~~~L~~~~~---~~~~~~~~~~~~~nPy~~~La~ad~i~VT~D-----SvSMvsEA~~  247 (311)
T PF06258_consen  181 ----YGGSLLVTTSRRTPP-EAEAALRELLK---DNPGVYIWDGTGENPYLGFLAAADAIVVTED-----SVSMVSEAAA  247 (311)
T ss_pred             ----CCCeEEEEcCCCCcH-HHHHHHHHhhc---CCCceEEecCCCCCcHHHHHHhCCEEEEcCc-----cHHHHHHHHH
Confidence                347788877742111 23444444443   23456344432  458899999999998765     3446789999


Q ss_pred             cCCcEEEeCCCC
Q 017085          288 FQLPVLGTAAGG  299 (377)
Q Consensus       288 ~g~PvI~s~~~~  299 (377)
                      .|+||.+...++
T Consensus       248 tG~pV~v~~l~~  259 (311)
T PF06258_consen  248 TGKPVYVLPLPG  259 (311)
T ss_pred             cCCCEEEecCCC
Confidence            999999987665

The function of this family is unknown.

>PLN00414 glycosyltransferase family protein

Probab=97.19  E-value=0.018  Score=53.49  Aligned_cols=154  Identities=8%  Similarity=-0.048  Sum_probs=87.3

Q ss_pred             CCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCC----CcccHHHHHHHHHHHhcCCCCcEE
Q 017085          174 RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDM----NAQTKFESELRNYVMQKKIQDRVH  249 (377)
Q Consensus       174 ~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~----~~~~~~~~~l~~~~~~~~~~~~v~  249 (377)
                      +++..+++.+|++.... .+.+.+.+.-|..         .+..|+++=...    +......+.+.+.++..    .++
T Consensus       250 ~~~sVvyvsfGS~~~~~-~~q~~e~a~gL~~---------s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~----g~v  315 (446)
T PLN00414        250 EPGSVVFCAFGTQFFFE-KDQFQEFCLGMEL---------TGLPFLIAVMPPKGSSTVQEALPEGFEERVKGR----GIV  315 (446)
T ss_pred             CCCceEEEeecccccCC-HHHHHHHHHHHHH---------cCCCeEEEEecCCCcccchhhCChhHHHHhcCC----CeE
Confidence            35567777788875332 2445555443322         455654332211    00111233444444432    355


Q ss_pred             EecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC----CCCccccee-cCcceeeecCC---CCChh
Q 017085          250 FVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA----AGGTTEIVV-NGTTGLLHPVG---KEGIT  321 (377)
Q Consensus       250 ~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~----~~~~~e~~~-~~~~g~~~~~~---~~~~~  321 (377)
                      +.++..+. ++++.+.+..+-+    .+.-++++||+.+|+|+|+-.    .......+. .-+.|..+...   ..+.+
T Consensus       316 v~~w~PQ~-~vL~h~~v~~fvt----H~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~  390 (446)
T PLN00414        316 WEGWVEQP-LILSHPSVGCFVN----HCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKE  390 (446)
T ss_pred             EeccCCHH-HHhcCCccceEEe----cCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHH
Confidence            66776443 6777775533333    334578999999999999864    334444553 34567666421   12389


Q ss_pred             HHHHHHHHHhhCH-HHHHHHHHHHHH
Q 017085          322 PLAKNIVKLATHV-ERRLTMGKRGYE  346 (377)
Q Consensus       322 ~la~~i~~l~~~~-~~~~~~~~~~~~  346 (377)
                      ++++++.+++.++ +..+++++++.+
T Consensus       391 ~i~~~v~~~m~~~~e~g~~~r~~a~~  416 (446)
T PLN00414        391 SLRDTVKSVMDKDSEIGNLVKRNHKK  416 (446)
T ss_pred             HHHHHHHHHhcCChhhHHHHHHHHHH
Confidence            9999999999764 445566666654

>PLN03004 UDP-glycosyltransferase

Probab=97.19  E-value=0.01  Score=55.05  Aligned_cols=85  Identities=13%  Similarity=0.060  Sum_probs=59.9

Q ss_pred             CcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe----CCCCcccceec-CcceeeecCC---C
Q 017085          246 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT----AAGGTTEIVVN-GTTGLLHPVG---K  317 (377)
Q Consensus       246 ~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s----~~~~~~e~~~~-~~~g~~~~~~---~  317 (377)
                      .++.+.++..+. ++++.+++..+-+.    +.-++++||+++|+|+|+-    |.......+.+ -+.|+.++..   .
T Consensus       334 ~g~~v~~W~PQ~-~iL~H~~v~~FvTH----~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~  408 (451)
T PLN03004        334 KGMVVKSWAPQV-PVLNHKAVGGFVTH----CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGF  408 (451)
T ss_pred             CcEEEEeeCCHH-HHhCCCccceEecc----CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCc
Confidence            468888886444 68899998554443    3456899999999999986    44455555543 3577776532   1


Q ss_pred             CChhHHHHHHHHHhhCHH
Q 017085          318 EGITPLAKNIVKLATHVE  335 (377)
Q Consensus       318 ~~~~~la~~i~~l~~~~~  335 (377)
                      .+.+++++++.+++++++
T Consensus       409 ~~~e~l~~av~~vm~~~~  426 (451)
T PLN03004        409 VSSTEVEKRVQEIIGECP  426 (451)
T ss_pred             cCHHHHHHHHHHHhcCHH
Confidence            238999999999998754

>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS)

Probab=97.14  E-value=0.021  Score=49.77  Aligned_cols=97  Identities=19%  Similarity=0.129  Sum_probs=57.7

Q ss_pred             EEEEeccccccc--hhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--
Q 017085          179 LFAIINSVSRGK--GQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--  254 (377)
Q Consensus       179 ~i~~~G~~~~~K--g~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--  254 (377)
                      +++..|.-.+.|  ..+.+.+.+..+.+         .+++++++|+.     +..+..++..+..+-...+.+.|..  
T Consensus       124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~---------~~~~ivl~g~~-----~e~~~~~~i~~~~~~~~~~~~~~~~~l  189 (279)
T cd03789         124 VVLPPGASGPAKRWPAERFAALADRLLA---------RGARVVLTGGP-----AERELAEEIAAALGGPRVVNLAGKTSL  189 (279)
T ss_pred             EEECCCCCCccccCCHHHHHHHHHHHHH---------CCCEEEEEech-----hhHHHHHHHHHhcCCCccccCcCCCCH
Confidence            333444333333  33455555554433         36888998875     2334444444443222334556653  


Q ss_pred             CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC
Q 017085          255 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA  296 (377)
Q Consensus       255 ~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~  296 (377)
                      .++..+++.||+++.+..      | .+-=|.++|+|+|+--
T Consensus       190 ~e~~~li~~~~l~I~~Ds------g-~~HlA~a~~~p~i~l~  224 (279)
T cd03789         190 RELAALLARADLVVTNDS------G-PMHLAAALGTPTVALF  224 (279)
T ss_pred             HHHHHHHHhCCEEEeeCC------H-HHHHHHHcCCCEEEEE
Confidence            789999999999997643      3 3344579999999753

Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PLN03007 UDP-glucosyltransferase family protein

Probab=97.14  E-value=0.026  Score=53.25  Aligned_cols=85  Identities=12%  Similarity=-0.029  Sum_probs=55.1

Q ss_pred             CCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCC----CCcccceec-Ccceeee------
Q 017085          245 QDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA----GGTTEIVVN-GTTGLLH------  313 (377)
Q Consensus       245 ~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~----~~~~e~~~~-~~~g~~~------  313 (377)
                      +.++++.++..+ .++|+.+++.++-+.    +.-++++||+.+|+|+|+-..    ......+.+ -+.|+-+      
T Consensus       344 ~~g~~v~~w~PQ-~~iL~h~~v~~fvtH----~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~  418 (482)
T PLN03007        344 GKGLIIRGWAPQ-VLILDHQATGGFVTH----CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLV  418 (482)
T ss_pred             cCCEEEecCCCH-HHHhccCccceeeec----CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEecccccc
Confidence            357888888744 478888887444443    335689999999999998643    333332221 1233332      


Q ss_pred             --cCCCCChhHHHHHHHHHhhCH
Q 017085          314 --PVGKEGITPLAKNIVKLATHV  334 (377)
Q Consensus       314 --~~~~~~~~~la~~i~~l~~~~  334 (377)
                        +....+.+++++++++++.++
T Consensus       419 ~~~~~~~~~~~l~~av~~~m~~~  441 (482)
T PLN03007        419 KVKGDFISREKVEKAVREVIVGE  441 (482)
T ss_pred             ccccCcccHHHHHHHHHHHhcCc
Confidence              111123889999999999875

>PLN02764 glycosyltransferase family protein

Probab=97.10  E-value=0.018  Score=53.34  Aligned_cols=94  Identities=12%  Similarity=-0.075  Sum_probs=58.4

Q ss_pred             EEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCC----CCcccceec-CcceeeecCC---CCC
Q 017085          248 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA----GGTTEIVVN-GTTGLLHPVG---KEG  319 (377)
Q Consensus       248 v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~----~~~~e~~~~-~~~g~~~~~~---~~~  319 (377)
                      +++.++..+ .++++...+..+-+    .+..++++||+.+|+|+|+-..    ......+.+ -+.|+.+...   +.+
T Consensus       319 ~v~~~W~PQ-~~vL~h~~v~~Fvt----H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~  393 (453)
T PLN02764        319 VVWGGWVQQ-PLILSHPSVGCFVS----HCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFS  393 (453)
T ss_pred             cEEeCCCCH-HHHhcCcccCeEEe----cCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccC
Confidence            566677633 36777765533333    3345799999999999998643    334445532 3456554221   223


Q ss_pred             hhHHHHHHHHHhhCH-HHHHHHHHHHHH
Q 017085          320 ITPLAKNIVKLATHV-ERRLTMGKRGYE  346 (377)
Q Consensus       320 ~~~la~~i~~l~~~~-~~~~~~~~~~~~  346 (377)
                      .+++.+++.+++.++ +..+++++++.+
T Consensus       394 ~e~i~~av~~vm~~~~~~g~~~r~~a~~  421 (453)
T PLN02764        394 KESLRDAINSVMKRDSEIGNLVKKNHTK  421 (453)
T ss_pred             HHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence            899999999999764 444555555443

>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=97.01  E-value=0.019  Score=53.49  Aligned_cols=93  Identities=17%  Similarity=0.107  Sum_probs=59.5

Q ss_pred             CcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC----CCCcccceecC-cceeeecCCCCCh
Q 017085          246 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA----AGGTTEIVVNG-TTGLLHPVGKEGI  320 (377)
Q Consensus       246 ~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~----~~~~~e~~~~~-~~g~~~~~~~~~~  320 (377)
                      ++..+.++..+. ++++..++..+-+.    +.-++++||+++|+|+|+-.    .......+.+. +.|+.+. ++.+.
T Consensus       324 ~~g~v~~w~PQ~-~iL~h~~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~-~~~~~  397 (451)
T PLN02410        324 GRGYIVKWAPQK-EVLSHPAVGGFWSH----CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE-GDLDR  397 (451)
T ss_pred             CCeEEEccCCHH-HHhCCCccCeeeec----CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC-CcccH
Confidence            566777876433 57777666333332    33468999999999999864    33444444333 5676664 22238


Q ss_pred             hHHHHHHHHHhhCHHHHHHHHHHHH
Q 017085          321 TPLAKNIVKLATHVERRLTMGKRGY  345 (377)
Q Consensus       321 ~~la~~i~~l~~~~~~~~~~~~~~~  345 (377)
                      +++++++.+++.+++ -++++++++
T Consensus       398 ~~v~~av~~lm~~~~-~~~~r~~a~  421 (451)
T PLN02410        398 GAVERAVKRLMVEEE-GEEMRKRAI  421 (451)
T ss_pred             HHHHHHHHHHHcCCc-HHHHHHHHH
Confidence            999999999998754 334444443

>PLN02208 glycosyltransferase family protein

Probab=97.00  E-value=0.026  Score=52.36  Aligned_cols=96  Identities=8%  Similarity=-0.071  Sum_probs=62.9

Q ss_pred             CcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC----CCCcccceec-CcceeeecCCC---
Q 017085          246 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA----AGGTTEIVVN-GTTGLLHPVGK---  317 (377)
Q Consensus       246 ~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~----~~~~~e~~~~-~~~g~~~~~~~---  317 (377)
                      .++++.++..+. ++++...+.++-|.    +.-++++||+++|+|+|+-.    ......++.+ -+.|..+...+   
T Consensus       311 ~g~~v~~W~PQ~-~iL~H~~v~~FvtH----cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~  385 (442)
T PLN02208        311 RGVVWGGWVQQP-LILDHPSIGCFVNH----CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGW  385 (442)
T ss_pred             CCcEeeccCCHH-HHhcCCccCeEEcc----CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCc
Confidence            467777876444 67888877555454    33578999999999999864    3334444333 35676664321   


Q ss_pred             CChhHHHHHHHHHhhCH-HHHHHHHHHHHH
Q 017085          318 EGITPLAKNIVKLATHV-ERRLTMGKRGYE  346 (377)
Q Consensus       318 ~~~~~la~~i~~l~~~~-~~~~~~~~~~~~  346 (377)
                      -+.++++++|.++++++ +..+++++++.+
T Consensus       386 ~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~  415 (442)
T PLN02208        386 FSKESLSNAIKSVMDKDSDLGKLVRSNHTK  415 (442)
T ss_pred             CcHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence            23799999999999765 344555555544

>PLN02562 UDP-glycosyltransferase

Probab=96.94  E-value=0.039  Score=51.41  Aligned_cols=88  Identities=14%  Similarity=-0.007  Sum_probs=59.9

Q ss_pred             CCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe----CCCCcccceec-CcceeeecCCCCC
Q 017085          245 QDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT----AAGGTTEIVVN-GTTGLLHPVGKEG  319 (377)
Q Consensus       245 ~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s----~~~~~~e~~~~-~~~g~~~~~~~~~  319 (377)
                      ++++.+.++. .-.++++..++.++-+.    +.-++++||+.+|+|+|+-    |.......+.+ -+.|+-+...+  
T Consensus       327 ~~~~~v~~w~-PQ~~iL~h~~v~~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~--  399 (448)
T PLN02562        327 SKQGKVVSWA-PQLEVLKHQAVGCYLTH----CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFG--  399 (448)
T ss_pred             ccCEEEEecC-CHHHHhCCCccceEEec----CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCC--
Confidence            3577778876 33467888776444443    3356899999999999976    44445555543 24566554334  


Q ss_pred             hhHHHHHHHHHhhCHHHHHH
Q 017085          320 ITPLAKNIVKLATHVERRLT  339 (377)
Q Consensus       320 ~~~la~~i~~l~~~~~~~~~  339 (377)
                      .+++++++++++.+++.+++
T Consensus       400 ~~~l~~~v~~~l~~~~~r~~  419 (448)
T PLN02562        400 QKEVEEGLRKVMEDSGMGER  419 (448)
T ss_pred             HHHHHHHHHHHhCCHHHHHH
Confidence            89999999999988654433

>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB

Probab=96.92  E-value=0.12  Score=45.46  Aligned_cols=72  Identities=11%  Similarity=-0.036  Sum_probs=41.9

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEE
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLG  294 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~  294 (377)
                      +.+++++....+.   ..+..++....+.-+..+......+++..+++.||+++....       ..++=|+.+|+|+|+
T Consensus       205 g~~v~~i~~~~~~---D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~~vI~~Rl-------H~~I~A~~~gvP~i~  274 (298)
T TIGR03609       205 GAFVLFLPFQQPQ---DLPLARALRDQLLGPAEVLSPLDPEELLGLFASARLVIGMRL-------HALILAAAAGVPFVA  274 (298)
T ss_pred             CCeEEEEeCCcch---hHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCCEEEEech-------HHHHHHHHcCCCEEE
Confidence            5666665543222   223333333433323344322223688899999998875543       246779999999997


Q ss_pred             eC
Q 017085          295 TA  296 (377)
Q Consensus       295 s~  296 (377)
                      -.
T Consensus       275 i~  276 (298)
T TIGR03609       275 LS  276 (298)
T ss_pred             ee
Confidence            64

The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).

>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria

Probab=96.89  E-value=0.0045  Score=48.83  Aligned_cols=38  Identities=13%  Similarity=0.170  Sum_probs=30.7

Q ss_pred             ccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhH
Q 017085          107 LPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELM  151 (377)
Q Consensus       107 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~  151 (377)
                      +..+|..++++.+.++.+-..+    .   +|+.||+-|||++.+
T Consensus       133 l~~~D~~isPT~wQ~~~fP~~~----r---~kI~VihdGiDt~~~  170 (171)
T PF12000_consen  133 LEQADAGISPTRWQRSQFPAEF----R---SKISVIHDGIDTDRF  170 (171)
T ss_pred             HHhCCcCcCCCHHHHHhCCHHH----H---cCcEEeecccchhhc
Confidence            3578899999999988777633    2   689999999998754

This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.

>PLN02210 UDP-glucosyl transferase

Probab=96.85  E-value=0.034  Score=51.89  Aligned_cols=84  Identities=12%  Similarity=0.095  Sum_probs=55.5

Q ss_pred             cEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC----CCCcccceec-CcceeeecCC----C
Q 017085          247 RVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA----AGGTTEIVVN-GTTGLLHPVG----K  317 (377)
Q Consensus       247 ~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~----~~~~~e~~~~-~~~g~~~~~~----~  317 (377)
                      +..+.++..+. ++++.+++..+-+.    +.-++++||+.+|+|+|+-.    .......+.+ -+.|..+...    .
T Consensus       325 ~g~v~~w~PQ~-~iL~h~~vg~FitH----~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~  399 (456)
T PLN02210        325 QGVVLEWSPQE-KILSHMAISCFVTH----CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGE  399 (456)
T ss_pred             CeEEEecCCHH-HHhcCcCcCeEEee----CCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCc
Confidence            44566776443 68888885444343    23458999999999999864    3444445544 4577666421    1


Q ss_pred             CChhHHHHHHHHHhhCHH
Q 017085          318 EGITPLAKNIVKLATHVE  335 (377)
Q Consensus       318 ~~~~~la~~i~~l~~~~~  335 (377)
                      -+.+++++++.+++.+++
T Consensus       400 ~~~~~l~~av~~~m~~~~  417 (456)
T PLN02210        400 LKVEEVERCIEAVTEGPA  417 (456)
T ss_pred             CCHHHHHHHHHHHhcCch
Confidence            237899999999997643

>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=96.85  E-value=0.1  Score=49.10  Aligned_cols=80  Identities=11%  Similarity=0.122  Sum_probs=51.9

Q ss_pred             CcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHHcCCcEEEe----CCCCcccceec-CcceeeecCC--
Q 017085          246 DRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAFQLPVLGT----AAGGTTEIVVN-GTTGLLHPVG--  316 (377)
Q Consensus       246 ~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s----~~~~~~e~~~~-~~~g~~~~~~--  316 (377)
                      .++.+.++..+ .+++..  +++|+  +    .+..++++||+++|+|+|+-    |.......+.+ -+.|.....+  
T Consensus       343 ~g~~v~~w~PQ-~~vL~h~~v~~fv--t----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~  415 (477)
T PLN02863        343 RGLVIRGWAPQ-VAILSHRAVGAFL--T----HCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGAD  415 (477)
T ss_pred             CCEEecCCCCH-HHHhcCCCcCeEE--e----cCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCC
Confidence            46778888744 467776  44555  3    33456899999999999986    44444444332 3567655221  


Q ss_pred             -CCChhHHHHHHHHHhh
Q 017085          317 -KEGITPLAKNIVKLAT  332 (377)
Q Consensus       317 -~~~~~~la~~i~~l~~  332 (377)
                       ..+.+++++++.+++.
T Consensus       416 ~~~~~~~v~~~v~~~m~  432 (477)
T PLN02863        416 TVPDSDELARVFMESVS  432 (477)
T ss_pred             CCcCHHHHHHHHHHHhh
Confidence             1127899999998884

>PLN02167 UDP-glycosyltransferase family protein

Probab=96.80  E-value=0.072  Score=50.15  Aligned_cols=83  Identities=13%  Similarity=-0.025  Sum_probs=51.5

Q ss_pred             cEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC----CCCcccc-eecCcceeeecCC-----
Q 017085          247 RVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA----AGGTTEI-VVNGTTGLLHPVG-----  316 (377)
Q Consensus       247 ~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~----~~~~~e~-~~~~~~g~~~~~~-----  316 (377)
                      +..+.++.. -.++++...+..+-+    -+.-++++||+++|+|+|+-.    ....... +..-+.|..+...     
T Consensus       341 rg~v~~w~P-Q~~iL~h~~vg~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~  415 (475)
T PLN02167        341 RGLVCGWAP-QVEILAHKAIGGFVS----HCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAY  415 (475)
T ss_pred             CeeeeccCC-HHHHhcCcccCeEEe----eCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccccccc
Confidence            445667763 346777755433223    233458999999999999864    3334332 3344567665321     


Q ss_pred             --CCChhHHHHHHHHHhhCH
Q 017085          317 --KEGITPLAKNIVKLATHV  334 (377)
Q Consensus       317 --~~~~~~la~~i~~l~~~~  334 (377)
                        ..+.+++++++.+++.+.
T Consensus       416 ~~~~~~~~l~~av~~~m~~~  435 (475)
T PLN02167        416 GEIVKADEIAGAVRSLMDGE  435 (475)
T ss_pred             CCcccHHHHHHHHHHHhcCC
Confidence              113789999999999754

>PLN02173 UDP-glucosyl transferase family protein

Probab=96.72  E-value=0.05  Score=50.54  Aligned_cols=95  Identities=11%  Similarity=0.114  Sum_probs=62.2

Q ss_pred             CcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC----CCCcccceecC-cceeeecCCC---
Q 017085          246 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA----AGGTTEIVVNG-TTGLLHPVGK---  317 (377)
Q Consensus       246 ~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~----~~~~~e~~~~~-~~g~~~~~~~---  317 (377)
                      +++.+.++..+. ++++...+..+-+.    +..++++||+++|+|+|+-.    .......+.+. +.|+-+...+   
T Consensus       317 ~~~~i~~W~PQ~-~iL~H~~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~  391 (449)
T PLN02173        317 DKSLVLKWSPQL-QVLSNKAIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESG  391 (449)
T ss_pred             CceEEeCCCCHH-HHhCCCccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCC
Confidence            568888887544 68888886555453    34579999999999999864    33444455442 4666553211   


Q ss_pred             -CChhHHHHHHHHHhhCHHHHHHHHHHHHH
Q 017085          318 -EGITPLAKNIVKLATHVERRLTMGKRGYE  346 (377)
Q Consensus       318 -~~~~~la~~i~~l~~~~~~~~~~~~~~~~  346 (377)
                       -+.+++++++.+++.+++ .+++++++.+
T Consensus       392 ~~~~e~v~~av~~vm~~~~-~~~~r~~a~~  420 (449)
T PLN02173        392 IAKREEIEFSIKEVMEGEK-SKEMKENAGK  420 (449)
T ss_pred             cccHHHHHHHHHHHhcCCh-HHHHHHHHHH
Confidence             127999999999997643 2444444443

>PLN02555 limonoid glucosyltransferase

Probab=96.71  E-value=0.091  Score=49.32  Aligned_cols=94  Identities=16%  Similarity=0.138  Sum_probs=59.2

Q ss_pred             CCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHHcCCcEEEeC----CCCcccceecC-cceeeec---
Q 017085          245 QDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA----AGGTTEIVVNG-TTGLLHP---  314 (377)
Q Consensus       245 ~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~----~~~~~e~~~~~-~~g~~~~---  314 (377)
                      .+++.+.++..+ .++++.  +.+|+  +    .+.-++++||+.+|+|+|+-.    .......+.+. +.|+.+.   
T Consensus       336 ~~~g~v~~W~PQ-~~iL~H~~v~~Fv--t----H~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~  408 (480)
T PLN02555        336 GDKGKIVQWCPQ-EKVLAHPSVACFV--T----HCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGE  408 (480)
T ss_pred             CCceEEEecCCH-HHHhCCCccCeEE--e----cCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCc
Confidence            457777787644 356744  44555  3    334568999999999999864    33344444443 5666652   


Q ss_pred             --CCCCChhHHHHHHHHHhhCHHHHHHHHHHHHH
Q 017085          315 --VGKEGITPLAKNIVKLATHVERRLTMGKRGYE  346 (377)
Q Consensus       315 --~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~  346 (377)
                        .+..+.+++++++.+++.+++ -++++++|++
T Consensus       409 ~~~~~v~~~~v~~~v~~vm~~~~-g~~~r~ra~~  441 (480)
T PLN02555        409 AENKLITREEVAECLLEATVGEK-AAELKQNALK  441 (480)
T ss_pred             cccCcCcHHHHHHHHHHHhcCch-HHHHHHHHHH
Confidence              112237899999999997643 3455555544

>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=96.68  E-value=0.14  Score=45.96  Aligned_cols=100  Identities=20%  Similarity=0.195  Sum_probs=64.9

Q ss_pred             CCeEEEEec-cccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc
Q 017085          176 EDLLFAIIN-SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT  254 (377)
Q Consensus       176 ~~~~i~~~G-~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~  254 (377)
                      .+.+++..| +....|+..  .+-++++.+.|.+     ..++++++|+.     ...+..++.....+-  .+.+.|..
T Consensus       175 ~~~i~i~pg~s~~~~K~wp--~e~~~~l~~~l~~-----~~~~Vvl~g~~-----~e~e~~~~i~~~~~~--~~~l~~k~  240 (334)
T COG0859         175 RPYIVINPGASRGSAKRWP--LEHYAELAELLIA-----KGYQVVLFGGP-----DEEERAEEIAKGLPN--AVILAGKT  240 (334)
T ss_pred             CCeEEEeccccccccCCCC--HHHHHHHHHHHHH-----CCCEEEEecCh-----HHHHHHHHHHHhcCC--ccccCCCC
Confidence            456777777 555666654  3344444445544     34889999987     345555555555432  23366654


Q ss_pred             --CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC
Q 017085          255 --LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA  296 (377)
Q Consensus       255 --~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~  296 (377)
                        .++..+++.||+++.+..      | .+-=|.|.|+|+|+--
T Consensus       241 sL~e~~~li~~a~l~I~~DS------g-~~HlAaA~~~P~I~iy  277 (334)
T COG0859         241 SLEELAALIAGADLVIGNDS------G-PMHLAAALGTPTIALY  277 (334)
T ss_pred             CHHHHHHHHhcCCEEEccCC------h-HHHHHHHcCCCEEEEE
Confidence              889999999999997654      2 2345889999999863

>PLN02554 UDP-glycosyltransferase family protein

Probab=96.66  E-value=0.077  Score=50.04  Aligned_cols=85  Identities=13%  Similarity=0.039  Sum_probs=52.9

Q ss_pred             CcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC----CCCcc-cceecCcceeeecC-----
Q 017085          246 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA----AGGTT-EIVVNGTTGLLHPV-----  315 (377)
Q Consensus       246 ~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~----~~~~~-e~~~~~~~g~~~~~-----  315 (377)
                      +++.+.++..+ .++++...+..+-+    .+.-++++||+.+|+|+|+-.    ..... ..++.-+.|..+..     
T Consensus       342 ~~g~v~~W~PQ-~~iL~H~~v~~Fvt----H~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~  416 (481)
T PLN02554        342 DIGKVIGWAPQ-VAVLAKPAIGGFVT----HCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGD  416 (481)
T ss_pred             cCceEEeeCCH-HHHhCCcccCcccc----cCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecccccc
Confidence            46666777643 36774444433323    333568999999999999864    33344 23444456666531     


Q ss_pred             ------CCCChhHHHHHHHHHhh-CHH
Q 017085          316 ------GKEGITPLAKNIVKLAT-HVE  335 (377)
Q Consensus       316 ------~~~~~~~la~~i~~l~~-~~~  335 (377)
                            ...+.++++++|.+++. +++
T Consensus       417 ~~~~~~~~~~~e~l~~av~~vm~~~~~  443 (481)
T PLN02554        417 LLAGEMETVTAEEIERGIRCLMEQDSD  443 (481)
T ss_pred             ccccccCeEcHHHHHHHHHHHhcCCHH
Confidence                  11237899999999996 543

>PLN02992 coniferyl-alcohol glucosyltransferase

Probab=96.59  E-value=0.13  Score=48.23  Aligned_cols=83  Identities=10%  Similarity=-0.038  Sum_probs=56.3

Q ss_pred             cEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC----CCCcccce-ecCcceeeecCC--CCC
Q 017085          247 RVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA----AGGTTEIV-VNGTTGLLHPVG--KEG  319 (377)
Q Consensus       247 ~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~----~~~~~e~~-~~~~~g~~~~~~--~~~  319 (377)
                      .+++.++..+. ++++...+..+-+.    +.-++++||+.+|+|+|+-.    .......+ ..-+.|...+..  ..+
T Consensus       339 g~vv~~W~PQ~-~iL~h~~vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~  413 (481)
T PLN02992        339 GFVVPSWAPQA-EILAHQAVGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVIS  413 (481)
T ss_pred             CEEEeecCCHH-HHhCCcccCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCccc
Confidence            57888886443 67788777443343    34568999999999999864    34444454 244567666431  124


Q ss_pred             hhHHHHHHHHHhhCH
Q 017085          320 ITPLAKNIVKLATHV  334 (377)
Q Consensus       320 ~~~la~~i~~l~~~~  334 (377)
                      .++++++|.+++.++
T Consensus       414 ~~~l~~av~~vm~~~  428 (481)
T PLN02992        414 RSKIEALVRKVMVEE  428 (481)
T ss_pred             HHHHHHHHHHHhcCC
Confidence            899999999999763

>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase []

Probab=96.41  E-value=0.011  Score=47.13  Aligned_cols=88  Identities=13%  Similarity=0.029  Sum_probs=58.2

Q ss_pred             chhHHHhhhcccEEEEcCchhhhH-HHHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhh
Q 017085           48 GQETINTALKADLIVLNTAVAGKW-LDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKN  126 (377)
Q Consensus        48 ~~~~~~~~~~~Div~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  126 (377)
                      .+..++++.+||+|++.++.+... +..+...+... .+|++..+-++..    -.-.+.-+.+|..++.|+.+++.+. 
T Consensus        80 ~l~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~-~~p~~tvvTD~~~----~H~~W~~~~~D~y~Vase~~~~~l~-  153 (169)
T PF06925_consen   80 RLIRLLREFQPDLIISTHPFPAQVPLSRLKRRGRLP-NIPVVTVVTDFDT----VHPFWIHPGVDRYFVASEEVKEELI-  153 (169)
T ss_pred             HHHHHHhhcCCCEEEECCcchhhhHHHHHHHhhccc-CCcEEEEEcCCCC----CCcCeecCCCCEEEECCHHHHHHHH-
Confidence            455666789999999999986666 55444332211 2355555555421    0112234788999999999988777 


Q ss_pred             hhhhhhhccCCCeEEEEcC
Q 017085          127 RTRERLRIKMPDTYVVHLG  145 (377)
Q Consensus       127 ~~~~~~~~~~~~~~vi~ng  145 (377)
                          +.|++++++.+...+
T Consensus       154 ----~~Gi~~~~I~vtGiP  168 (169)
T PF06925_consen  154 ----ERGIPPERIHVTGIP  168 (169)
T ss_pred             ----HcCCChhHEEEeCcc
Confidence                578999988887544

; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process

>PLN00164 glucosyltransferase; Provisional

Probab=96.32  E-value=0.2  Score=47.27  Aligned_cols=95  Identities=12%  Similarity=-0.006  Sum_probs=59.5

Q ss_pred             cEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe----CCCCcccce-ecCcceeeecCC-----
Q 017085          247 RVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT----AAGGTTEIV-VNGTTGLLHPVG-----  316 (377)
Q Consensus       247 ~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s----~~~~~~e~~-~~~~~g~~~~~~-----  316 (377)
                      .+.+.++..+ .++++.+++..+-+.    +.-++++||+.+|+|+|+-    |.......+ +.-+.|+.+...     
T Consensus       340 g~~v~~w~PQ-~~iL~h~~vg~fvtH----~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~  414 (480)
T PLN00164        340 GLVWPTWAPQ-KEILAHAAVGGFVTH----CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDN  414 (480)
T ss_pred             CeEEeecCCH-HHHhcCcccCeEEee----cccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCC
Confidence            3566677533 468888886444443    2346899999999999986    444444443 333567665321     


Q ss_pred             CCChhHHHHHHHHHhhCHH-HHHHHHHHHHH
Q 017085          317 KEGITPLAKNIVKLATHVE-RRLTMGKRGYE  346 (377)
Q Consensus       317 ~~~~~~la~~i~~l~~~~~-~~~~~~~~~~~  346 (377)
                      ..+.++++++|.+++.+++ ..+++++++.+
T Consensus       415 ~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~  445 (480)
T PLN00164        415 FVEAAELERAVRSLMGGGEEEGRKAREKAAE  445 (480)
T ss_pred             cCcHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence            0137899999999997643 24445444443

>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT

Probab=96.26  E-value=0.065  Score=46.39  Aligned_cols=106  Identities=15%  Similarity=0.150  Sum_probs=62.3

Q ss_pred             CCCeEEEEecccccc-------chhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCc
Q 017085          175 NEDLLFAIINSVSRG-------KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR  247 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~-------Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~  247 (377)
                      .++..|+++......       .....+++.+..+.+       +.|++++++--..........    ....+..-..+
T Consensus       115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~-------~~p~~~lvvK~HP~~~~~~~~----~~~~~~~~~~~  183 (269)
T PF05159_consen  115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAK-------ENPDAKLVVKPHPDERGGNKY----SYLEELPNLPN  183 (269)
T ss_pred             CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHH-------HCCCCEEEEEECchhhCCCCh----hHhhhhhcCCC
Confidence            444555666665443       234455566555443       337888776544211000011    22222211245


Q ss_pred             EEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC
Q 017085          248 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG  298 (377)
Q Consensus       248 v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~  298 (377)
                      +.+......+.+++..||.++.-+       +.+.+||+.+|+||++...+
T Consensus       184 ~~~~~~~~~~~~Ll~~s~~Vvtin-------StvGlEAll~gkpVi~~G~~  227 (269)
T PF05159_consen  184 VVIIDDDVNLYELLEQSDAVVTIN-------STVGLEALLHGKPVIVFGRA  227 (269)
T ss_pred             eEEECCCCCHHHHHHhCCEEEEEC-------CHHHHHHHHcCCceEEecCc
Confidence            666665568999999999887433       45899999999999997644

Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport

>PLN02152 indole-3-acetate beta-glucosyltransferase

Probab=96.15  E-value=0.19  Score=46.93  Aligned_cols=86  Identities=10%  Similarity=0.082  Sum_probs=55.6

Q ss_pred             CCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC----CCCcccceecC-cceeeecC--CC
Q 017085          245 QDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA----AGGTTEIVVNG-TTGLLHPV--GK  317 (377)
Q Consensus       245 ~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~----~~~~~e~~~~~-~~g~~~~~--~~  317 (377)
                      .++..+.++..+. ++++..++.++-+.    +..++++||+.+|+|+|+-.    .......+.+. +.|+-+..  .+
T Consensus       326 ~~~g~v~~W~PQ~-~iL~h~~vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~  400 (455)
T PLN02152        326 EEVGMIVSWCSQI-EVLRHRAVGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEG  400 (455)
T ss_pred             cCCeEEEeeCCHH-HHhCCcccceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCC
Confidence            3566777876443 68888887555453    34568999999999999864    33344444331 24444421  11


Q ss_pred             -CChhHHHHHHHHHhhCHH
Q 017085          318 -EGITPLAKNIVKLATHVE  335 (377)
Q Consensus       318 -~~~~~la~~i~~l~~~~~  335 (377)
                       .+.+++++++.++++++.
T Consensus       401 ~~~~e~l~~av~~vm~~~~  419 (455)
T PLN02152        401 LVERGEIRRCLEAVMEEKS  419 (455)
T ss_pred             cCcHHHHHHHHHHHHhhhH
Confidence             137899999999997543

>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]

Probab=96.12  E-value=0.69  Score=38.86  Aligned_cols=119  Identities=12%  Similarity=0.054  Sum_probs=67.8

Q ss_pred             HHHHHHhCCCCCCeEEEEeccccccchh--HHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHh-
Q 017085          165 EHVRESLGVRNEDLLFAIINSVSRGKGQ--DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQ-  241 (377)
Q Consensus       165 ~~~r~~~~~~~~~~~i~~~G~~~~~Kg~--~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~-  241 (377)
                      +..+..+.+ +..++-+++|.-++.=..  |........+.+.|.+     ..+.|++.-+..     -.+.++..++. 
T Consensus       151 e~~~~~~p~-~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~-----~g~~~lisfSRR-----Tp~~~~s~l~~~  219 (329)
T COG3660         151 EAFKHLLPL-PRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILEN-----QGGSFLISFSRR-----TPDTVKSILKNN  219 (329)
T ss_pred             HHHHhhCCC-CCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHh-----CCceEEEEeecC-----CcHHHHHHHHhc
Confidence            334444433 456777788865443332  3344444434444433     557777765532     23445555554 


Q ss_pred             cCCCCcEEEecCc---CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC
Q 017085          242 KKIQDRVHFVNKT---LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG  299 (377)
Q Consensus       242 ~~~~~~v~~~g~~---~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~  299 (377)
                      +.-..-+.+-+.-   +-..++|++||.++.+-.     .=+.+.||.+.|+||.+...++
T Consensus       220 l~s~~~i~w~~~d~g~NPY~~~La~Adyii~TaD-----SinM~sEAasTgkPv~~~~~~~  275 (329)
T COG3660         220 LNSSPGIVWNNEDTGYNPYIDMLAAADYIISTAD-----SINMCSEAASTGKPVFILEPPN  275 (329)
T ss_pred             cccCceeEeCCCCCCCCchHHHHhhcceEEEecc-----hhhhhHHHhccCCCeEEEecCC
Confidence            3322233443331   457899999999997654     2345679999999999875444

>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II

Probab=96.09  E-value=0.11  Score=46.54  Aligned_cols=109  Identities=11%  Similarity=0.095  Sum_probs=65.6

Q ss_pred             HHHHHHhCCCC-CCeEEEEecc-ccccchh--HHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHH
Q 017085          165 EHVRESLGVRN-EDLLFAIINS-VSRGKGQ--DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVM  240 (377)
Q Consensus       165 ~~~r~~~~~~~-~~~~i~~~G~-~~~~Kg~--~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~  240 (377)
                      ......++++. +.++++..|. ..+.|..  +...+.+..+.+         .+.++++.|+..     ..+..++...
T Consensus       162 ~~~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~---------~~~~ivl~G~~~-----e~~~~~~i~~  227 (334)
T TIGR02195       162 AAALAKFGLDTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID---------QGYQVVLFGSAK-----DHPAGNEIEA  227 (334)
T ss_pred             HHHHHHcCCCCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH---------CCCEEEEEEChh-----hHHHHHHHHH
Confidence            34556667654 4566666665 3355544  456666554432         457888888752     2333333333


Q ss_pred             hcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe
Q 017085          241 QKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT  295 (377)
Q Consensus       241 ~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s  295 (377)
                      ..+ ...+.+.|..  .++..+++.||++|.+-.     .  .+-=|.|+|+|+|+-
T Consensus       228 ~~~-~~~~~l~g~~sL~el~ali~~a~l~I~~DS-----G--p~HlAaA~~~P~i~l  276 (334)
T TIGR02195       228 LLP-GELRNLAGETSLDEAVDLIALAKAVVTNDS-----G--LMHVAAALNRPLVAL  276 (334)
T ss_pred             hCC-cccccCCCCCCHHHHHHHHHhCCEEEeeCC-----H--HHHHHHHcCCCEEEE
Confidence            322 1223466753  789999999999996543     2  344578999999975

This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>PLN02207 UDP-glycosyltransferase

Probab=95.69  E-value=0.52  Score=44.15  Aligned_cols=82  Identities=15%  Similarity=0.056  Sum_probs=51.3

Q ss_pred             CcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC----CCCcccceec-Ccceeeec------
Q 017085          246 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA----AGGTTEIVVN-GTTGLLHP------  314 (377)
Q Consensus       246 ~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~----~~~~~e~~~~-~~~g~~~~------  314 (377)
                      ++..+.++..+. ++++...+..+-+.    +.-++++||+.+|+|+|+-.    ......++.+ -+.|.-+.      
T Consensus       332 ~~g~i~~W~PQ~-~IL~H~~vg~FvTH----~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~  406 (468)
T PLN02207        332 GRGMICGWSPQV-EILAHKAVGGFVSH----CGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVH  406 (468)
T ss_pred             CCeEEEEeCCHH-HHhcccccceeeec----CccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccc
Confidence            566667776443 56777666444343    33468999999999999864    3344443333 34555331      


Q ss_pred             CCC-CChhHHHHHHHHHhh
Q 017085          315 VGK-EGITPLAKNIVKLAT  332 (377)
Q Consensus       315 ~~~-~~~~~la~~i~~l~~  332 (377)
                      ..+ .+.++++++|.+++.
T Consensus       407 ~~~~v~~e~i~~av~~vm~  425 (468)
T PLN02207        407 SDEIVNANEIETAIRCVMN  425 (468)
T ss_pred             cCCcccHHHHHHHHHHHHh
Confidence            001 127899999999996

>PF15024 Glyco_transf_18: Glycosyltransferase family 18

Probab=95.64  E-value=0.37  Score=45.22  Aligned_cols=145  Identities=13%  Similarity=0.088  Sum_probs=89.2

Q ss_pred             ccc-cccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHH
Q 017085          184 NSV-SRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPY  260 (377)
Q Consensus       184 G~~-~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~  260 (377)
                      |.- .-++|-+..++++.+.           -+++-.+.+...              ....++.-|+=+|..  +++.++
T Consensus       284 GK~~~~w~~k~~~l~~l~~~-----------~eih~tV~~~~~--------------~~~~~P~~V~NHG~l~~~ef~~l  338 (559)
T PF15024_consen  284 GKERYMWKGKEKYLDVLHKY-----------MEIHGTVYDEPQ--------------RPPNVPSFVKNHGILSGDEFQQL  338 (559)
T ss_pred             ccchhhhcCcHHHHHHHHhh-----------cEEEEEeccCCC--------------CCcccchhhhhcCcCCHHHHHHH
Confidence            443 3367777777777532           456666654431              011223334445543  789999


Q ss_pred             HHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC---------------cccceec---------CcceeeecCC
Q 017085          261 LAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG---------------TTEIVVN---------GTTGLLHPVG  316 (377)
Q Consensus       261 ~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~---------------~~e~~~~---------~~~g~~~~~~  316 (377)
                      ++.+.++|--... .|  |-+.+||+|+|+|.|-.....               ..++-..         .-.=+.++..
T Consensus       339 L~~akvfiGlGfP-~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG~PhVytVd~~  415 (559)
T PF15024_consen  339 LRKAKVFIGLGFP-YE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIGEPHVYTVDIN  415 (559)
T ss_pred             HHhhhEeeecCCC-CC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCCCCeEEEEcCC
Confidence            9999999954432 33  346899999999999654221               1111110         1122455666


Q ss_pred             CCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 017085          317 KEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE  367 (377)
Q Consensus       317 ~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~  367 (377)
                      |  .+++.+||.++++++-  +       -++--.|+-+.+.+|+..+++.
T Consensus       416 n--~~~v~~Avk~il~~~v--~-------Py~P~efT~egmLeRv~~~ie~  455 (559)
T PF15024_consen  416 N--STEVEAAVKAILATPV--E-------PYLPYEFTCEGMLERVNALIEK  455 (559)
T ss_pred             C--HHHHHHHHHHHHhcCC--C-------CcCCcccCHHHHHHHHHHHHHh
Confidence            6  9999999999988652  1       2333569999999999887764

>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional

Probab=95.57  E-value=0.16  Score=45.84  Aligned_cols=101  Identities=9%  Similarity=0.006  Sum_probs=61.5

Q ss_pred             CCeEEEEeccccccchhH--HHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecC
Q 017085          176 EDLLFAIINSVSRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK  253 (377)
Q Consensus       176 ~~~~i~~~G~~~~~Kg~~--~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~  253 (377)
                      +.++++..|.-.+.|...  ...+.++.+    .+     .+++++++|+..+.   ..+..++..+...-...+.+.|.
T Consensus       183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L----~~-----~~~~vvl~ggp~e~---e~~~~~~i~~~~~~~~~~~l~g~  250 (352)
T PRK10422        183 QNYVVIQPTARQIFKCWDNDKFSAVIDAL----QA-----RGYEVVLTSGPDKD---DLACVNEIAQGCQTPPVTALAGK  250 (352)
T ss_pred             CCeEEEecCCCccccCCCHHHHHHHHHHH----HH-----CCCeEEEEcCCChH---HHHHHHHHHHhcCCCccccccCC
Confidence            467777777755666543  455555544    32     46788888764221   12222333332222234556775


Q ss_pred             c--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe
Q 017085          254 T--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT  295 (377)
Q Consensus       254 ~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s  295 (377)
                      .  .++..+++.||++|.+-.     .+  +-=|.|+|+|+|+-
T Consensus       251 ~sL~el~ali~~a~l~v~nDS-----Gp--~HlAaA~g~P~v~l  287 (352)
T PRK10422        251 TTFPELGALIDHAQLFIGVDS-----AP--AHIAAAVNTPLICL  287 (352)
T ss_pred             CCHHHHHHHHHhCCEEEecCC-----HH--HHHHHHcCCCEEEE
Confidence            4  889999999999996543     23  44477999999975

>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2

Probab=95.56  E-value=0.025  Score=48.14  Aligned_cols=21  Identities=24%  Similarity=0.118  Sum_probs=16.8

Q ss_pred             cHhhHHHhcCceEEEEEecCC
Q 017085            2 ELAFLLRGVGTKVNWITIQKP   22 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~   22 (377)
                      .|+++|+++||+|.|+++..+
T Consensus        24 ~L~kaL~~~G~~V~Vi~P~y~   44 (245)
T PF08323_consen   24 SLPKALAKQGHDVRVIMPKYG   44 (245)
T ss_dssp             HHHHHHHHTT-EEEEEEE-TH
T ss_pred             HHHHHHHhcCCeEEEEEccch
Confidence            589999999999999998753

4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....

>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=95.51  E-value=0.21  Score=42.50  Aligned_cols=103  Identities=15%  Similarity=0.127  Sum_probs=57.2

Q ss_pred             CCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc
Q 017085          175 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT  254 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~  254 (377)
                      ++..+++..|.-.+.|....  +-+.+|.+.|.+     ..+.++++|+..+.   ..+......+... ...+.+.|..
T Consensus       104 ~~~~i~i~~~a~~~~k~wp~--e~~~~l~~~l~~-----~~~~vvl~g~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~  172 (247)
T PF01075_consen  104 DKPYIGINPGASWPSKRWPA--EKWAELIERLKE-----RGYRVVLLGGPEEQ---EKEIADQIAAGLQ-NPVINLAGKT  172 (247)
T ss_dssp             TSSEEEEE---SSGGGS--H--HHHHHHHHHHCC-----CT-EEEE--SSHHH---HHHHHHHHHTTHT-TTTEEETTTS
T ss_pred             cCCeEEEeecCCCccccCCH--HHHHHHHHHHHh-----hCceEEEEccchHH---HHHHHHHHHHhcc-cceEeecCCC
Confidence            55677777777667776543  444455555544     33788888887310   1222233333222 1257777764


Q ss_pred             --CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe
Q 017085          255 --LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT  295 (377)
Q Consensus       255 --~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s  295 (377)
                        .++..+++.||++|.+-.     .  .+-=|.|+|+|+|+-
T Consensus       173 ~l~e~~ali~~a~~~I~~Dt-----g--~~HlA~a~~~p~v~l  208 (247)
T PF01075_consen  173 SLRELAALISRADLVIGNDT-----G--PMHLAAALGTPTVAL  208 (247)
T ss_dssp             -HHHHHHHHHTSSEEEEESS-----H--HHHHHHHTT--EEEE
T ss_pred             CHHHHHHHHhcCCEEEecCC-----h--HHHHHHHHhCCEEEE
Confidence              788999999999997653     2  344589999999986

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.

>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis

Probab=95.42  E-value=0.8  Score=39.39  Aligned_cols=36  Identities=14%  Similarity=0.225  Sum_probs=29.3

Q ss_pred             CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCC
Q 017085          255 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA  297 (377)
Q Consensus       255 ~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~  297 (377)
                      .++..+++.||+++....      . ..+=|+++|+|+|+-+.
T Consensus       249 ~~~~~~~~~~~~~Is~Rl------H-~~I~a~~~g~P~i~i~y  284 (286)
T PF04230_consen  249 DELLELISQADLVISMRL------H-GAILALSLGVPVIAISY  284 (286)
T ss_pred             HHHHHHHhcCCEEEecCC------H-HHHHHHHcCCCEEEEec
Confidence            789999999999997654      2 46669999999998653

CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].

>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional

Probab=95.36  E-value=0.4  Score=43.23  Aligned_cols=108  Identities=11%  Similarity=0.046  Sum_probs=63.6

Q ss_pred             HHHHhCCC-CCCeEEEEeccc-cccchh--HHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhc
Q 017085          167 VRESLGVR-NEDLLFAIINSV-SRGKGQ--DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK  242 (377)
Q Consensus       167 ~r~~~~~~-~~~~~i~~~G~~-~~~Kg~--~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~  242 (377)
                      ..+.+++. ++.++++..|.- .+.|..  +.+.+.++.+.+         .++++++.|+..     ..+..++.....
T Consensus       170 ~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~---------~~~~vvl~Gg~~-----e~~~~~~i~~~~  235 (348)
T PRK10916        170 TCAAFSLSSERPIIGFCPGAEFGPAKRWPHYHYAELAQQLID---------EGYQVVLFGSAK-----DHEAGNEILAAL  235 (348)
T ss_pred             HHHHcCCCCCCCEEEEeCCCCCccccCCCHHHHHHHHHHHHH---------CCCeEEEEeCHH-----hHHHHHHHHHhc
Confidence            44455554 345666666653 344543  445555554422         467888888752     333334433333


Q ss_pred             CCC---CcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe
Q 017085          243 KIQ---DRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT  295 (377)
Q Consensus       243 ~~~---~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s  295 (377)
                      +-+   ..+.+.|..  .++..+++.||++|.+-.     .+  +-=|.|.|+|+|+-
T Consensus       236 ~~~~~~~~~~l~g~~sL~el~ali~~a~l~I~nDT-----Gp--~HlAaA~g~P~val  286 (348)
T PRK10916        236 NTEQQAWCRNLAGETQLEQAVILIAACKAIVTNDS-----GL--MHVAAALNRPLVAL  286 (348)
T ss_pred             ccccccceeeccCCCCHHHHHHHHHhCCEEEecCC-----hH--HHHHHHhCCCEEEE
Confidence            211   124556653  789999999999996543     23  44588999999974

>PLN02534 UDP-glycosyltransferase

Probab=95.33  E-value=1.6  Score=41.26  Aligned_cols=95  Identities=14%  Similarity=0.020  Sum_probs=56.1

Q ss_pred             CcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC----Cccccee-cCcceeeec------
Q 017085          246 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVV-NGTTGLLHP------  314 (377)
Q Consensus       246 ~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~----~~~e~~~-~~~~g~~~~------  314 (377)
                      .++++.++..+ .+++...++..+-+    .+..++++||+++|+|+|+-...    .....+. .-+.|+-+.      
T Consensus       344 ~g~~v~~w~pq-~~iL~h~~v~~fvt----H~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~  418 (491)
T PLN02534        344 RGLLIKGWAPQ-VLILSHPAIGGFLT----HCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVR  418 (491)
T ss_pred             CCeeccCCCCH-HHHhcCCccceEEe----cCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEeccccccc
Confidence            46777788754 46888888844434    34467999999999999987532    1212221 112333221      


Q ss_pred             CC-------CCChhHHHHHHHHHhhC-HHHHHHHHHHHH
Q 017085          315 VG-------KEGITPLAKNIVKLATH-VERRLTMGKRGY  345 (377)
Q Consensus       315 ~~-------~~~~~~la~~i~~l~~~-~~~~~~~~~~~~  345 (377)
                      .+       ..+.+++++++.+++.+ .+.-+++++++.
T Consensus       419 ~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~  457 (491)
T PLN02534        419 WGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQ  457 (491)
T ss_pred             ccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHH
Confidence            00       01378999999999962 222334444443

>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional

Probab=95.24  E-value=1.2  Score=39.70  Aligned_cols=98  Identities=12%  Similarity=-0.000  Sum_probs=56.9

Q ss_pred             CCCeEEEEeccccccchh--HHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEec
Q 017085          175 NEDLLFAIINSVSRGKGQ--DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN  252 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~Kg~--~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g  252 (377)
                      .++++++..|.-.+.|..  +...+.+..+    .+     .++++++.|+++    .+.+...+..+..   .++.+.|
T Consensus       177 ~~~~i~~~~~~s~~~k~Wp~e~~a~li~~l----~~-----~~~~ivl~~G~~----~e~~~~~~i~~~~---~~~~l~g  240 (322)
T PRK10964        177 AGPYLVFLHATTRDDKHWPEAHWRELIGLL----AP-----SGLRIKLPWGAE----HEEQRAKRLAEGF---PYVEVLP  240 (322)
T ss_pred             CCCeEEEEeCCCcccccCCHHHHHHHHHHH----HH-----CCCeEEEeCCCH----HHHHHHHHHHccC---CcceecC
Confidence            345554445543344443  3455555544    22     356777763332    2233333333321   2466777


Q ss_pred             Cc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe
Q 017085          253 KT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT  295 (377)
Q Consensus       253 ~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s  295 (377)
                      ..  .++..+++.||++|.+..     .  .+-=|.|+|+|+|+-
T Consensus       241 ~~sL~elaali~~a~l~I~nDS-----G--p~HlA~A~g~p~val  278 (322)
T PRK10964        241 KLSLEQVARVLAGAKAVVSVDT-----G--LSHLTAALDRPNITL  278 (322)
T ss_pred             CCCHHHHHHHHHhCCEEEecCC-----c--HHHHHHHhCCCEEEE
Confidence            54  789999999999997553     2  344588999999975

>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I

Probab=95.24  E-value=0.88  Score=40.44  Aligned_cols=98  Identities=14%  Similarity=0.010  Sum_probs=59.8

Q ss_pred             CCCeEEEEeccccccchh--HHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEec
Q 017085          175 NEDLLFAIINSVSRGKGQ--DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN  252 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~Kg~--~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g  252 (377)
                      +++.+++..|.-.+.|..  +...+.+..+.+         .+++++++|+++    ...+..++..+..+   +..+.|
T Consensus       178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~---------~~~~~vl~~g~~----~e~~~~~~i~~~~~---~~~l~g  241 (319)
T TIGR02193       178 PAPYAVLLHATSRDDKTWPEERWRELARLLLA---------RGLQIVLPWGND----AEKQRAERIAEALP---GAVVLP  241 (319)
T ss_pred             CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHH---------CCCeEEEeCCCH----HHHHHHHHHHhhCC---CCeecC
Confidence            355666777754556655  355555554432         367888875442    23333444444332   235567


Q ss_pred             Cc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe
Q 017085          253 KT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT  295 (377)
Q Consensus       253 ~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s  295 (377)
                      ..  .++.++++.||++|.+-.     .+  +-=|.|+|+|+|+-
T Consensus       242 ~~sL~el~ali~~a~l~I~~DS-----gp--~HlAaa~g~P~i~l  279 (319)
T TIGR02193       242 KMSLAEVAALLAGADAVVGVDT-----GL--THLAAALDKPTVTL  279 (319)
T ss_pred             CCCHHHHHHHHHcCCEEEeCCC-----hH--HHHHHHcCCCEEEE
Confidence            53  789999999999997543     33  34467899999975

This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative

Probab=94.95  E-value=0.56  Score=42.22  Aligned_cols=102  Identities=10%  Similarity=-0.008  Sum_probs=60.5

Q ss_pred             CCCeEEEEeccccccchh--HHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEec
Q 017085          175 NEDLLFAIINSVSRGKGQ--DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN  252 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~Kg~--~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g  252 (377)
                      .+.++++..|.-.+.|..  +...+.++.+.    +     .+++++++|+..+.   ..+..++.....+-+..+.+.|
T Consensus       180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~----~-----~~~~ivl~g~p~~~---e~~~~~~i~~~~~~~~~~~l~g  247 (344)
T TIGR02201       180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALH----A-----RGYEVVLTSGPDKD---ELAMVNEIAQGCQTPRVTSLAG  247 (344)
T ss_pred             CCCEEEEeCCCCccccCCCHHHHHHHHHHHH----h-----CCCeEEEecCCCHH---HHHHHHHHHhhCCCCcccccCC
Confidence            345666666664455544  44555554442    2     46788888864211   1222333333333222355677


Q ss_pred             Cc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe
Q 017085          253 KT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT  295 (377)
Q Consensus       253 ~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s  295 (377)
                      ..  .++..+++.||++|.+-.     .  .+-=|.|+|+|+|+-
T Consensus       248 ~~sL~el~ali~~a~l~Vs~DS-----G--p~HlAaA~g~p~v~L  285 (344)
T TIGR02201       248 KLTLPQLAALIDHARLFIGVDS-----V--PMHMAAALGTPLVAL  285 (344)
T ss_pred             CCCHHHHHHHHHhCCEEEecCC-----H--HHHHHHHcCCCEEEE
Confidence            54  789999999999996543     2  344588999999975

This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.

>COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]

Probab=94.86  E-value=3.1  Score=38.07  Aligned_cols=194  Identities=10%  Similarity=0.086  Sum_probs=102.9

Q ss_pred             cccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEecccc
Q 017085          108 PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS  187 (377)
Q Consensus       108 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~  187 (377)
                      ...+...+.+......+.+    .+++...++.....|-....+......    .........++++.+..+|+|.-.++
T Consensus       147 ~~~dy~~~~~~~~~~if~~----~f~~~~~~i~~~G~Pr~D~~~~~~~~~----~~~~~~~~~~~~~~~k~vIlyaPTfr  218 (388)
T COG1887         147 NHWDYLISPNPESTAIFAE----AFNIDKENILETGYPRNDKLFDEAGKT----EDILLIQLALPLPQDKKVILYAPTFR  218 (388)
T ss_pred             eeeeeeeeCChhhHHHHHH----HhcccccceeecCcccchhhhhhccch----hhhHHHhhhcCCcccCceEEecCCcc
Confidence            3445555555544444333    667766655555444433333222111    11122445677788889999988887


Q ss_pred             ccc---h---hHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHH
Q 017085          188 RGK---G---QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYL  261 (377)
Q Consensus       188 ~~K---g---~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~  261 (377)
                      +..   |   ....++. .++.+.+.+     .++.+++--...     ....+...-   ...+-+.....-.++.++|
T Consensus       219 ~~~~~~~~~~~~~~~~~-~~~~~~l~~-----~~~~ii~k~Hp~-----is~~~~~~~---~~~~~~~~vs~~~di~dll  284 (388)
T COG1887         219 DNDVLIGTQFFNLDIDI-EKLKEKLGE-----NEYVIIVKPHPL-----ISDKIDKRY---ALDDFVLDVSDNADINDLL  284 (388)
T ss_pred             CCccccchhhhhhhhhH-HHHHHhhcc-----CCeEEEEecChh-----hhhhhhhhh---hccceeEecccchhHHHHH
Confidence            765   2   2222222 222333321     456655544421     111111111   1122233444356899999


Q ss_pred             HhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC---------CcccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          262 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG---------GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       262 ~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~---------~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                      ..+|+++-=       ++.+..|+|...+|||..-.-         -..+ .....-|-++..    .+++.++|.....
T Consensus       285 ~~sDiLITD-------ySSv~fdf~~l~KPiify~~D~~~y~~~rg~~~d-~~~~~Pg~~~~~----~~~li~ai~~~~~  352 (388)
T COG1887         285 LVSDILITD-------YSSVIFDFMLLDKPIIFYTYDLEQYDELRGFYLD-YKFEAPGEVVET----QEELIDAIKPYDE  352 (388)
T ss_pred             hhhCEEEee-------chHHHHHHHHhcCcEEEEecChHHHHhhhhhhhh-HHhcCCcccccc----HHHHHHHHHhhhc
Confidence            999999832       456899999999999976211         1111 111223444443    6788888888877


Q ss_pred             CHH
Q 017085          333 HVE  335 (377)
Q Consensus       333 ~~~  335 (377)
                      +.+
T Consensus       353 ~~~  355 (388)
T COG1887         353 DGN  355 (388)
T ss_pred             ccc
Confidence            544

>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]

Probab=94.79  E-value=0.83  Score=43.43  Aligned_cols=93  Identities=14%  Similarity=0.098  Sum_probs=53.8

Q ss_pred             CCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe----CCCCcccceec-CcceeeecCCCCC
Q 017085          245 QDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT----AAGGTTEIVVN-GTTGLLHPVGKEG  319 (377)
Q Consensus       245 ~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s----~~~~~~e~~~~-~~~g~~~~~~~~~  319 (377)
                      +.+|.+.++..+..-++....+.++-+.   .|++ +++|++.+|+|+|+.    |..-....+.+ +..+.+...+- .
T Consensus       334 ~~nV~~~~W~PQ~~lll~H~~v~~FvTH---gG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~-~  408 (496)
T KOG1192|consen  334 RGNVVLSKWAPQNDLLLDHPAVGGFVTH---GGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDL-V  408 (496)
T ss_pred             cCceEEecCCCcHHHhcCCCcCcEEEEC---Cccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhc-C
Confidence            3478888887555433333333333342   3444 569999999999954    33344444444 33444433322 2


Q ss_pred             hhHHHHHHHHHhhCHHHHHHHHH
Q 017085          320 ITPLAKNIVKLATHVERRLTMGK  342 (377)
Q Consensus       320 ~~~la~~i~~l~~~~~~~~~~~~  342 (377)
                      ..++.+++..++++++..+...+
T Consensus       409 ~~~~~~~~~~il~~~~y~~~~~~  431 (496)
T KOG1192|consen  409 SEELLEAIKEILENEEYKEAAKR  431 (496)
T ss_pred             cHHHHHHHHHHHcChHHHHHHHH
Confidence            34488899999888775444433

>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=94.66  E-value=0.14  Score=36.40  Aligned_cols=80  Identities=9%  Similarity=0.197  Sum_probs=53.0

Q ss_pred             EEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecC----c-C--CHHHHHHhcCEEEecCCCC-CCccchHHHHHHHcC
Q 017085          218 AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK----T-L--TVAPYLAAIDVLVQNSQAW-GECFGRITIEAMAFQ  289 (377)
Q Consensus       218 l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~----~-~--~~~~~~~~adv~l~ps~~~-~e~~~~~~~Ea~a~g  289 (377)
                      ++|+|+..    .....+++.++++|..  ..++|.    . .  .+...+..+|++++++..- ...+-.+--+|-..|
T Consensus         2 vliVGG~~----~~~~~~~~~~~~~G~~--~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~   75 (97)
T PF10087_consen    2 VLIVGGRE----DRERRYKRILEKYGGK--LIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYG   75 (97)
T ss_pred             EEEEcCCc----ccHHHHHHHHHHcCCE--EEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcC
Confidence            57788832    3678888899999875  333332    2 3  3788899999999876520 112223333777889


Q ss_pred             CcEEEeCCCCcccc
Q 017085          290 LPVLGTAAGGTTEI  303 (377)
Q Consensus       290 ~PvI~s~~~~~~e~  303 (377)
                      +|++.++..+...+
T Consensus        76 ip~~~~~~~~~~~l   89 (97)
T PF10087_consen   76 IPIIYSRSRGVSSL   89 (97)
T ss_pred             CcEEEECCCCHHHH
Confidence            99999987665544

>PLN03015 UDP-glucosyl transferase

Probab=94.49  E-value=1.6  Score=40.86  Aligned_cols=80  Identities=11%  Similarity=0.034  Sum_probs=49.4

Q ss_pred             EEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCC----CCcccce-ecCcceeeec----CCCC
Q 017085          248 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA----GGTTEIV-VNGTTGLLHP----VGKE  318 (377)
Q Consensus       248 v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~----~~~~e~~-~~~~~g~~~~----~~~~  318 (377)
                      +++.++..+. ++++...+..+-+.    +.-++++||+.+|+|+|+-..    ......+ ..-+.|.-+.    .+..
T Consensus       337 l~v~~W~PQ~-~vL~h~~vg~fvtH----~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v  411 (470)
T PLN03015        337 LVVTQWAPQV-EILSHRSIGGFLSH----CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVI  411 (470)
T ss_pred             eEEEecCCHH-HHhccCccCeEEec----CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCcc
Confidence            5566776443 56667666444443    234689999999999998643    2233333 2234555542    1112


Q ss_pred             ChhHHHHHHHHHhh
Q 017085          319 GITPLAKNIVKLAT  332 (377)
Q Consensus       319 ~~~~la~~i~~l~~  332 (377)
                      ..+++++++++++.
T Consensus       412 ~~e~i~~~v~~lm~  425 (470)
T PLN03015        412 GREEVASLVRKIVA  425 (470)
T ss_pred             CHHHHHHHHHHHHc
Confidence            37899999999995

>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]

Probab=93.89  E-value=1.6  Score=33.32  Aligned_cols=99  Identities=11%  Similarity=0.145  Sum_probs=59.8

Q ss_pred             eEEEEeccccccchhHHHHHHHH--HHHHHHhhhcccCCCeEEEE-EecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc
Q 017085          178 LLFAIINSVSRGKGQDLFLHSFY--ESLELIKEKKLEVPSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT  254 (377)
Q Consensus       178 ~~i~~~G~~~~~Kg~~~ll~a~~--~l~~~l~~~~~~~~~~~l~i-~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~  254 (377)
                      -+|+.+|.-.    .|.|+.+..  ..++.|.+.|    =.+++| .|.|...-++..+   ...+..|+  .|....+.
T Consensus         5 ~vFVTVGtT~----Fd~LI~~Vl~~~~~~~L~k~G----~~kLiiQ~Grg~~~~~d~~~---~~~k~~gl--~id~y~f~   71 (170)
T KOG3349|consen    5 TVFVTVGTTS----FDDLISCVLSEEFLQELQKRG----FTKLIIQIGRGQPFFGDPID---LIRKNGGL--TIDGYDFS   71 (170)
T ss_pred             EEEEEecccc----HHHHHHHHcCHHHHHHHHHcC----ccEEEEEecCCccCCCCHHH---hhcccCCe--EEEEEecC
Confidence            4677788543    788887653  4445566542    235554 5776322111112   11122222  24444455


Q ss_pred             CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe
Q 017085          255 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT  295 (377)
Q Consensus       255 ~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s  295 (377)
                      ..+.++++.||+++.      .+...+++|.+..|+|.|+-
T Consensus        72 psl~e~I~~AdlVIs------HAGaGS~letL~l~KPlivV  106 (170)
T KOG3349|consen   72 PSLTEDIRSADLVIS------HAGAGSCLETLRLGKPLIVV  106 (170)
T ss_pred             ccHHHHHhhccEEEe------cCCcchHHHHHHcCCCEEEE
Confidence            889999999999983      33455899999999998865

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []

Probab=91.42  E-value=0.2  Score=44.08  Aligned_cols=69  Identities=13%  Similarity=0.070  Sum_probs=46.2

Q ss_pred             CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCC-cEEEeC--CCCcccceecCcceeeecCCCCChhHHHHHH
Q 017085          255 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQL-PVLGTA--AGGTTEIVVNGTTGLLHPVGKEGITPLAKNI  327 (377)
Q Consensus       255 ~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~-PvI~s~--~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i  327 (377)
                      .+..+.|+.|..++.|.-  ...+..-++|||++|+ |||.++  .-...+++.-....+.++..+  ..++-+.|
T Consensus       228 ~~~~~~l~~S~FCL~p~G--~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~--~~~l~~iL  299 (302)
T PF03016_consen  228 SEYMELLRNSKFCLCPRG--DGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEAD--LPELPEIL  299 (302)
T ss_pred             hHHHHhcccCeEEEECCC--CCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHH--HHHHHHHH
Confidence            357788999999999875  4457889999999995 677665  234566664444555565433  44443333

Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane

>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides

Probab=90.49  E-value=2.4  Score=34.32  Aligned_cols=127  Identities=14%  Similarity=0.115  Sum_probs=56.7

Q ss_pred             cHhhHHHhc--CceEEEEEecCCCcchhHhhhhhhhhc-ccCceEEEcc---chhHHHhhhcccEEEEcCch--hhhHHH
Q 017085            2 ELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMW-DRGVQVISAK---GQETINTALKADLIVLNTAV--AGKWLD   73 (377)
Q Consensus         2 ~la~~L~~~--G~eV~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~Div~~~~~~--~~~~~~   73 (377)
                      .|+++|+++  |+.|.+-+....+  ....   ...+. .....+.+..   ....+++.-+||++++....  +. ++.
T Consensus        39 ~Li~~l~~~~p~~~illT~~T~tg--~~~~---~~~~~~~v~~~~~P~D~~~~~~rfl~~~~P~~~i~~EtElWPn-ll~  112 (186)
T PF04413_consen   39 PLIKRLRKQRPDLRILLTTTTPTG--REMA---RKLLPDRVDVQYLPLDFPWAVRRFLDHWRPDLLIWVETELWPN-LLR  112 (186)
T ss_dssp             HHHHHHTT---TS-EEEEES-CCH--HHHH---HGG-GGG-SEEE---SSHHHHHHHHHHH--SEEEEES----HH-HHH
T ss_pred             HHHHHHHHhCCCCeEEEEecCCch--HHHH---HHhCCCCeEEEEeCccCHHHHHHHHHHhCCCEEEEEccccCHH-HHH
Confidence            467888876  6666555543321  1111   11111 1223334433   34667778899999887532  32 222


Q ss_pred             HHhhcCCCccccceeEEeeeec------ccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEc
Q 017085           74 AVLKEDVPRVLPNVLWWIHEMR------GHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHL  144 (377)
Q Consensus        74 ~~~~~~~~~~~~~~v~~~h~~~------~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~n  144 (377)
                      .+...++     |++..---+.      ..++.......+..+|.+.+.++..++.+.     .+|.+++++.+..|
T Consensus       113 ~a~~~~i-----p~~LvNarls~~s~~~~~~~~~~~r~~l~~f~~i~aqs~~da~r~~-----~lG~~~~~v~v~Gn  179 (186)
T PF04413_consen  113 EAKRRGI-----PVVLVNARLSERSFRRYRRFPFLFRPLLSRFDRILAQSEADAERFR-----KLGAPPERVHVTGN  179 (186)
T ss_dssp             H-----S------EEEEEE--------------HHHHHHGGG-SEEEESSHHHHHHHH-----TTT-S--SEEE---
T ss_pred             HHhhcCC-----CEEEEeeeeccccchhhhhhHHHHHHHHHhCCEEEECCHHHHHHHH-----HcCCCcceEEEeCc
Confidence            2222233     3333211111      122334556667899999999999998887     78999899999887

Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.

>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=90.16  E-value=4.3  Score=38.16  Aligned_cols=95  Identities=13%  Similarity=0.068  Sum_probs=62.6

Q ss_pred             CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcC-CcEEEeCC--CCcccceecCcceeeecCCCCChhHHHHHHHHHh
Q 017085          255 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQ-LPVLGTAA--GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLA  331 (377)
Q Consensus       255 ~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g-~PvI~s~~--~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~  331 (377)
                      ....+.|+.|..++.|.-  .+...-.++||+..| +|||.++.  ..+.+.+.-..-++.++..+  ...+   |.+.|
T Consensus       335 ~~y~~~m~~S~FCL~p~G--d~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~~~~--v~~~---~~~iL  407 (464)
T KOG1021|consen  335 LNYMEGMQDSKFCLCPPG--DTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVPEKD--VPEL---IKNIL  407 (464)
T ss_pred             chHHHHhhcCeEEECCCC--CCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEEHHH--hhhH---HHHHH
Confidence            567899999999999987  677777999999999 58888874  44555554445566666333  4444   33333


Q ss_pred             h--CHHHHHHHHHHHHHHHHHhcCHHH
Q 017085          332 T--HVERRLTMGKRGYERVKEIFQEHH  356 (377)
Q Consensus       332 ~--~~~~~~~~~~~~~~~~~~~f~~~~  356 (377)
                      .  ..+....|+++....+.++|-+..
T Consensus       408 ~~i~~~~~~~m~~~v~~~v~r~~~~~~  434 (464)
T KOG1021|consen  408 LSIPEEEVLRMRENVIRLVPRHFLKKP  434 (464)
T ss_pred             HhcCHHHHHHHHHHHHHHHHhhEEeCC
Confidence            2  344456666666555556555543

>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=89.92  E-value=0.39  Score=36.62  Aligned_cols=36  Identities=22%  Similarity=0.296  Sum_probs=25.7

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEcc
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK   47 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   47 (377)
                      -|+++|+++||||++.+...          +.......|+.+.+..
T Consensus        17 ala~~L~~rGh~V~~~~~~~----------~~~~v~~~Gl~~~~~~   52 (139)
T PF03033_consen   17 ALARALRRRGHEVRLATPPD----------FRERVEAAGLEFVPIP   52 (139)
T ss_dssp             HHHHHHHHTT-EEEEEETGG----------GHHHHHHTT-EEEESS
T ss_pred             HHHHHHhccCCeEEEeeccc----------ceecccccCceEEEec
Confidence            47899999999999888664          4555566788776644

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....

>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E

Probab=88.42  E-value=6.2  Score=32.68  Aligned_cols=85  Identities=13%  Similarity=0.153  Sum_probs=53.9

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhc-CCCCcEEEecCcCCHHHHHHhcCEEEecCCC-------CCC-ccchHHHH
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQK-KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA-------WGE-CFGRITIE  284 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~-------~~e-~~~~~~~E  284 (377)
                      .+.++.++........++...+.+...++ |....+...-..++..+.+..||++++|.-+       +.+ ++--.+-+
T Consensus        30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~l~~  109 (212)
T cd03146          30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFDTEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAILKA  109 (212)
T ss_pred             CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccCcccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHHHHH
Confidence            46788888876655445677778888888 7642222221225667899999999988521       011 22233445


Q ss_pred             HHHcCCcEEEeCCC
Q 017085          285 AMAFQLPVLGTAAG  298 (377)
Q Consensus       285 a~a~g~PvI~s~~~  298 (377)
                      +...|+|++.+..|
T Consensus       110 ~~~~g~~i~G~SAG  123 (212)
T cd03146         110 ALERGVVYIGWSAG  123 (212)
T ss_pred             HHHCCCEEEEECHh
Confidence            66789999987654

Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.

>TIGR03646 YtoQ_fam YtoQ family protein

Probab=87.26  E-value=5.3  Score=29.68  Aligned_cols=39  Identities=18%  Similarity=0.188  Sum_probs=24.2

Q ss_pred             HHHHHhcCEEEecCCCCCCcc--chHHH---HHHHcCCcEEEeCCCC
Q 017085          258 APYLAAIDVLVQNSQAWGECF--GRITI---EAMAFQLPVLGTAAGG  299 (377)
Q Consensus       258 ~~~~~~adv~l~ps~~~~e~~--~~~~~---Ea~a~g~PvI~s~~~~  299 (377)
                      ..++..||+++.-.   .|-+  -+..+   =|.|+|+|.|+-....
T Consensus        70 ~~li~~aDvvVvrF---GekYKQWNaAfDAg~aaAlgKplI~lh~~~  113 (144)
T TIGR03646        70 RKLIEKADVVIALF---GEKYKQWNAAFDAGYAAALGKPLIILRPEE  113 (144)
T ss_pred             HHHHhhCCEEEEEe---chHHHHHHHHhhHHHHHHcCCCeEEecchh
Confidence            45788999988532   1211  12333   4678999999876443

Members of this family are uncharacterized proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.

>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]

Probab=86.50  E-value=25  Score=31.93  Aligned_cols=94  Identities=18%  Similarity=0.167  Sum_probs=55.8

Q ss_pred             HHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC-cccceec-Ccceee
Q 017085          237 NYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG-TTEIVVN-GTTGLL  312 (377)
Q Consensus       237 ~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~-~~e~~~~-~~~g~~  312 (377)
                      .......-..++.+....  +++...++.||++|-.=.      . +++=||++|+|+|+-.... ...+.++ +-.++.
T Consensus       257 ~ia~~~~~~~~i~~~~d~~~~~~~~~l~~~dl~Vg~R~------H-saI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~  329 (385)
T COG2327         257 AIAQLVLDSAEILVSSDEYAEELGGILAACDLIVGMRL------H-SAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFA  329 (385)
T ss_pred             HHHhhcCCccceEeecchHHHHHHHHhccCceEEeehh------H-HHHHHHhcCCCeEEEeecHHHHHHHHHcCCCccc
Confidence            333333323567666643  456778999999874322      2 5677999999999875332 2222222 334455


Q ss_pred             ecCCCCChhHHHHHHHHHhh-CHHHH
Q 017085          313 HPVGKEGITPLAKNIVKLAT-HVERR  337 (377)
Q Consensus       313 ~~~~~~~~~~la~~i~~l~~-~~~~~  337 (377)
                      .+..+.+.+.+..+..+.+. .++.+
T Consensus       330 ~~i~~~~~~~l~~~~~e~~~~~~~~~  355 (385)
T COG2327         330 IDIDPLDAEILSAVVLERLTKLDELR  355 (385)
T ss_pred             ccCCCCchHHHHHHHHHHHhccHHHH
Confidence            55544447788877776665 44433

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=86.26  E-value=2.3  Score=31.76  Aligned_cols=45  Identities=13%  Similarity=0.125  Sum_probs=31.5

Q ss_pred             CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcc
Q 017085          255 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTT  301 (377)
Q Consensus       255 ~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~  301 (377)
                      +++.+++..+|+++--|.  .+..--.+-.++..|+|+|+..+|...
T Consensus        59 ~~l~~~~~~~DVvIDfT~--p~~~~~~~~~~~~~g~~~ViGTTG~~~  103 (124)
T PF01113_consen   59 DDLEELLEEADVVIDFTN--PDAVYDNLEYALKHGVPLVIGTTGFSD  103 (124)
T ss_dssp             S-HHHHTTH-SEEEEES---HHHHHHHHHHHHHHT-EEEEE-SSSHH
T ss_pred             hhHHHhcccCCEEEEcCC--hHHhHHHHHHHHhCCCCEEEECCCCCH
Confidence            678999999999998776  566556666888999999987766543

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK10840 transcriptional regulator RcsB; Provisional

Probab=86.06  E-value=14  Score=30.45  Aligned_cols=112  Identities=14%  Similarity=0.127  Sum_probs=65.2

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--hcCEEEecCCCCCC---ccchHHHHHHH--
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGE---CFGRITIEAMA--  287 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~--~adv~l~ps~~~~e---~~~~~~~Ea~a--  287 (377)
                      +++++++.+..    .....+....+..+.-..+......++....+.  ..|++++-..- .+   ..|..+++.+.  
T Consensus         3 ~~~Ilivdd~~----~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~DlvllD~~l-~~~~~~~g~~~~~~l~~~   77 (216)
T PRK10840          3 NMNVIIADDHP----IVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM-PGDKYGDGITLIKYIKRH   77 (216)
T ss_pred             ceEEEEECCcH----HHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHhCCCCEEEEeCcC-CCCCCCCHHHHHHHHHHH
Confidence            36777777753    345566666655432111222222234444443  36888875431 22   25667776664  


Q ss_pred             -cCCcEEEe-CCCC---cccceecCcceeeecCCCCChhHHHHHHHHHhhC
Q 017085          288 -FQLPVLGT-AAGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH  333 (377)
Q Consensus       288 -~g~PvI~s-~~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~  333 (377)
                       -++|+|+- ....   ....+..|..|++..+.+  .+++.++|..++..
T Consensus        78 ~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~--~~~l~~ai~~v~~g  126 (216)
T PRK10840         78 FPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGA--PTDLPKALAALQKG  126 (216)
T ss_pred             CCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCC--HHHHHHHHHHHHCC
Confidence             34566654 3322   223456688899999887  99999999988763

>PRK05282 (alpha)-aspartyl dipeptidase; Validated

Probab=85.99  E-value=15  Score=31.00  Aligned_cols=81  Identities=14%  Similarity=0.157  Sum_probs=51.7

Q ss_pred             EEEEEecCC--CcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCC--------CCCccchHHHHHH
Q 017085          217 HAVIIGSDM--NAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA--------WGECFGRITIEAM  286 (377)
Q Consensus       217 ~l~i~G~~~--~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~--------~~e~~~~~~~Ea~  286 (377)
                      ++.++....  .+...+.+..++..+++|..  +..+-..++..+.+..||++.++.-.        ...++--.+-|+.
T Consensus        33 ~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~--v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~~  110 (233)
T PRK05282         33 KAVFIPYAGVTQSWDDYTAKVAEALAPLGIE--VTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREAV  110 (233)
T ss_pred             eEEEECCCCCCCCHHHHHHHHHHHHHHCCCE--EEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHHH
Confidence            455554432  22335677788888888875  55554446677889999988776421        0112223355888


Q ss_pred             HcCCcEEEeCCCC
Q 017085          287 AFQLPVLGTAAGG  299 (377)
Q Consensus       287 a~g~PvI~s~~~~  299 (377)
                      ..|+|++.+..|.
T Consensus       111 ~~G~~~~G~SAGA  123 (233)
T PRK05282        111 KNGTPYIGWSAGA  123 (233)
T ss_pred             HCCCEEEEECHHH
Confidence            9999999887664

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=85.97  E-value=28  Score=32.02  Aligned_cols=97  Identities=13%  Similarity=0.073  Sum_probs=53.7

Q ss_pred             eEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHH-HHHHcCCcEEE
Q 017085          216 VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITI-EAMAFQLPVLG  294 (377)
Q Consensus       216 ~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~-Ea~a~g~PvI~  294 (377)
                      -+++|+...       .++-++++++++.    ... ..+++..++..+|+++..+.+...-.+...+ +++.-....+.
T Consensus       203 ~~i~IaNRT-------~erA~~La~~~~~----~~~-~l~el~~~l~~~DvVissTsa~~~ii~~~~ve~a~~~r~~~li  270 (414)
T COG0373         203 KKITIANRT-------LERAEELAKKLGA----EAV-ALEELLEALAEADVVISSTSAPHPIITREMVERALKIRKRLLI  270 (414)
T ss_pred             CEEEEEcCC-------HHHHHHHHHHhCC----eee-cHHHHHHhhhhCCEEEEecCCCccccCHHHHHHHHhcccCeEE
Confidence            455555554       4556666666651    111 1278999999999999776422233344444 34444444677


Q ss_pred             eCCCCcccceec---CcceeeecCCCCChhHHHHHHHH
Q 017085          295 TAAGGTTEIVVN---GTTGLLHPVGKEGITPLAKNIVK  329 (377)
Q Consensus       295 s~~~~~~e~~~~---~~~g~~~~~~~~~~~~la~~i~~  329 (377)
                      .|.+-.+++-.+   -.+-++++     .++|.....+
T Consensus       271 vDiavPRdie~~v~~l~~v~l~~-----iDDL~~iv~~  303 (414)
T COG0373         271 VDIAVPRDVEPEVGELPNVFLYT-----IDDLEEIVEE  303 (414)
T ss_pred             EEecCCCCCCccccCcCCeEEEe-----hhhHHHHHHH
Confidence            787666655432   11235555     5555555544

>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane []

Probab=85.14  E-value=8.3  Score=30.66  Aligned_cols=72  Identities=13%  Similarity=-0.013  Sum_probs=39.9

Q ss_pred             HhhhcccEEEEcCchhhhHHHHHhhcC--CCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHh
Q 017085           53 NTALKADLIVLNTAVAGKWLDAVLKED--VPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYW  124 (377)
Q Consensus        53 ~~~~~~Div~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~  124 (377)
                      +.+.+||+|+++++..+..+..+.+..  +-....+++|----.+.......-+..++.+|.+++..+..++.+
T Consensus        88 l~r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES~aRv~~lSlTGklly~~aD~f~VQW~~l~~~y  161 (170)
T PF08660_consen   88 LRRERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIESFARVKTLSLTGKLLYPFADRFIVQWEELAEKY  161 (170)
T ss_pred             HHHhCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEeeeecCCCchHHHHHHHhCCEEEEcCHHHHhHC
Confidence            356889999999977554443332211  111134666543332222222223334457899999998887754

>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis

Probab=83.74  E-value=8.5  Score=28.57  Aligned_cols=42  Identities=19%  Similarity=0.211  Sum_probs=26.0

Q ss_pred             HHHHHHhcCEEEecCCCCCCcc--chHHH---HHHHcCCcEEEeCCCCcc
Q 017085          257 VAPYLAAIDVLVQNSQAWGECF--GRITI---EAMAFQLPVLGTAAGGTT  301 (377)
Q Consensus       257 ~~~~~~~adv~l~ps~~~~e~~--~~~~~---Ea~a~g~PvI~s~~~~~~  301 (377)
                      ...++..||++|.-.   .|-+  -+..+   =|.|+|+|.|+-......
T Consensus        66 T~~li~~aDvVVvrF---GekYKQWNaAfDAg~a~AlgKplI~lh~~~~~  112 (141)
T PF11071_consen   66 TRTLIEKADVVVVRF---GEKYKQWNAAFDAGYAAALGKPLITLHPEELH  112 (141)
T ss_pred             HHHHHhhCCEEEEEe---chHHHHHHHHhhHHHHHHcCCCeEEecchhcc
Confidence            346789999988532   1211  12333   467999999987654433

This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=82.79  E-value=28  Score=32.22  Aligned_cols=45  Identities=7%  Similarity=-0.034  Sum_probs=29.8

Q ss_pred             CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccc
Q 017085          255 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEI  303 (377)
Q Consensus       255 ~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~  303 (377)
                      +++.+.+..+|+++..+.   .+-++.- ..+.-+.|.+.-|.+-..++
T Consensus       234 ~~l~~~l~~aDiVI~aT~---a~~~vi~-~~~~~~~~~~~iDLavPRdi  278 (414)
T PRK13940        234 SELPQLIKKADIIIAAVN---VLEYIVT-CKYVGDKPRVFIDISIPQAL  278 (414)
T ss_pred             HHHHHHhccCCEEEECcC---CCCeeEC-HHHhCCCCeEEEEeCCCCCC
Confidence            567888999999998775   2222222 33446789998887655554

>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme

Probab=82.28  E-value=18  Score=31.04  Aligned_cols=90  Identities=13%  Similarity=0.026  Sum_probs=58.2

Q ss_pred             cchHHHHHHHcCCcEEEeCCC---CcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCH
Q 017085          278 FGRITIEAMAFQLPVLGTAAG---GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQE  354 (377)
Q Consensus       278 ~~~~~~Ea~a~g~PvI~s~~~---~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~  354 (377)
                      ++..+-=-|+|+-.|+.....   -..+.+.....=+-+..+. +-++|.++|..+.++++..+++++++++++.+..+.
T Consensus       157 ~S~rl~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYvPv~~d~-sd~~l~~~i~~~~~~~~~a~~Ia~~~~~~~~~~L~~  235 (256)
T smart00672      157 WSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDL-SCRELKEAVDWGNEHDKKAQEIGKRGSEFIQQNLSM  235 (256)
T ss_pred             chhhHHHHHhcCceEEEeCCchhHHHHhcccCccceEEeeCCC-chhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCH
Confidence            444444556777666665421   1112222222222222221 123499999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHH
Q 017085          355 HHMAERIAVVLKEV  368 (377)
Q Consensus       355 ~~~~~~~~~~~~~~  368 (377)
                      +.+..-+..++.+.
T Consensus       236 ~~~~~Y~~~ll~ey  249 (256)
T smart00672      236 EDVYDYMFHLLQEY  249 (256)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99988777776553

>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins

Probab=82.17  E-value=15  Score=30.40  Aligned_cols=85  Identities=14%  Similarity=0.144  Sum_probs=54.4

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEec---CcCCHHHHHHhcCEEEecCCC-------CCCc-cchHH
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN---KTLTVAPYLAAIDVLVQNSQA-------WGEC-FGRIT  282 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g---~~~~~~~~~~~adv~l~ps~~-------~~e~-~~~~~  282 (377)
                      .+.++.++.........+.+.+.+..+++|........-   ..+++.+.+..||+++++.-+       +.+. .--.+
T Consensus        28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~~~~~i  107 (210)
T cd03129          28 AGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQLRLLSVLRETPLLDAI  107 (210)
T ss_pred             CCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcHHHHHHHHHhCChHHHH
Confidence            356777776654333346677888888888764333322   226788899999998876432       1222 22346


Q ss_pred             HHHHHcCCcEEEeCCC
Q 017085          283 IEAMAFQLPVLGTAAG  298 (377)
Q Consensus       283 ~Ea~a~g~PvI~s~~~  298 (377)
                      .+....|+|++.+..|
T Consensus       108 ~~~~~~G~v~~G~SAG  123 (210)
T cd03129         108 LKRVARGVVIGGTSAG  123 (210)
T ss_pred             HHHHHcCCeEEEcCHH
Confidence            7888889999987655

Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from

>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins

Probab=80.74  E-value=2.4  Score=29.11  Aligned_cols=46  Identities=13%  Similarity=0.066  Sum_probs=30.9

Q ss_pred             chhHHHhhhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeec
Q 017085           48 GQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMR   95 (377)
Q Consensus        48 ~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~   95 (377)
                      .++.+.-.++.||||.|+..+.....+.+....  .+.+.|++-|...
T Consensus        41 l~R~IlirE~I~IVHgH~a~S~l~hE~i~hA~~--mGlktVfTDHSLf   86 (90)
T PF08288_consen   41 LLRNILIRERIDIVHGHQAFSTLCHEAILHART--MGLKTVFTDHSLF   86 (90)
T ss_pred             HHHHHHHHcCeeEEEeehhhhHHHHHHHHHHHh--CCCcEEeeccccc
Confidence            456677789999999998776554444443222  2348899988653

These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process

>PRK10360 DNA-binding transcriptional activator UhpA; Provisional

Probab=80.05  E-value=25  Score=28.07  Aligned_cols=66  Identities=12%  Similarity=0.156  Sum_probs=44.8

Q ss_pred             cCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCc----ccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          264 IDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGT----TEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       264 adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~----~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                      .|++++-... .+.-|..+++.+....|+|+......    ...+..|..|++..+.+  .+++.++|..++.
T Consensus        48 ~dlvi~d~~~-~~~~g~~~~~~l~~~~~vi~~s~~~~~~~~~~~~~~ga~~~i~kp~~--~~~l~~~i~~~~~  117 (196)
T PRK10360         48 VQVCICDISM-PDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCS--PDELIAAVHTVAT  117 (196)
T ss_pred             CCEEEEeCCC-CCCCHHHHHHHHccCCCEEEEECCCCHHHHHHHHHcCCcEEEECCCC--HHHHHHHHHHHHc
Confidence            5777765431 34456677777777788876532222    23344577889999887  9999999998775

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	377
2jjm_A	394	Crystal Structure Of A Family Gt4 Glycosyltransfera		6e-11
3mbo_A	414	Crystal Structure Of The Glycosyltransferase Babsha		7e-11
2x6q_A	416	Crystal Structure Of Trehalose Synthase Tret From P		1e-04
2xmp_A	416	Crystal Structure Of Trehalose Synthase Tret Mutant		1e-04
3s28_A	816	The Crystal Structure Of Sucrose Synthase-1 In Comp		2e-04

>pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. Length = 394

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 244 IQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEI 303
           I+DRV F+ K   VA  LA  D+++  S+   E FG + +EAMA  +P +GT  GG  E+
Sbjct: 265 IEDRVLFLGKQDNVAELLAMSDLMLLLSEK--ESFGLVLLEAMACGVPCIGTRVGGIPEV 322
Query: 304 VVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQ 353
           + +G TG L  VG    T +A   ++L    E    MG+R  E V E F+
Sbjct: 323 IQHGDTGYLCEVGD--TTGVADQAIQLLKDEELHRNMGERARESVYEQFR 370

>pdb|3MBO|A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate Length = 414

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 244 IQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEI 303
           I+DRV F+ K   VA  LA  D+++  S+   E FG + +EAMA  +P +GT  GG  E+
Sbjct: 285 IEDRVLFLGKQDNVAELLAMSDLMLLLSEK--ESFGLVLLEAMACGVPCIGTRVGGIPEV 342
Query: 304 VVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQ 353
           + +G TG L  VG    T +A   ++L    E    MG+R  E V E F+
Sbjct: 343 IQHGDTGYLCEVGD--TTGVADQAIQLLKDEELHRNMGERARESVYEQFR 390

>pdb|2X6Q|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshi Length = 416

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 82/374 (21%), Positives = 140/374 (37%), Gaps = 61/374 (16%)
Query: 3   LAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIV 62
           L  LLR +G +  W  I+ P+E   V  +  + +          +G E++    +   + 
Sbjct: 62  LVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNAL----------QGNESLKLTEEMKELY 111
Query: 63  LNTAVA-GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMID-SHVT 120
           LN      K++D    + V          +H+ +       Y K  P +    ID S   
Sbjct: 112 LNVNRENSKFIDLSSFDYV---------LVHDPQPAALIEFYEKKSPWLWRCHIDLSSPN 162
Query: 121 AEYWKNRTRERLRIKMPDTYVVHLG---------NSKELMEVAEDNVAKR--------VL 163
            E+W+   R    ++  D Y+ HL          N   +M  + D ++++        +L
Sbjct: 163 REFWEFLRR---FVEKYDRYIFHLPEYVQPELDRNKAVIMPPSIDPLSEKNVELKQTEIL 219
Query: 164 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVIIG- 222
           R  + E   V  E  +   ++     KG        ++           +P V  +++G 
Sbjct: 220 R--ILERFDVDPEKPIITQVSRFDPWKG-------IFDVIEIYRKVKEKIPGVQLLLVGV 270
Query: 223 ---SDMNAQTKFESELRNYVMQKKIQDRVHFVN-KTLTVAPYLAAIDVLVQNSQAWGECF 278
               D      FE  LR       ++   + +      V  +  A DV++Q S    E F
Sbjct: 271 MAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIR--EGF 328
Query: 279 GRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRL 338
           G    EAM    PV+G A GG    +V+G TG L     E +    + ++ L  H E   
Sbjct: 329 GLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVRDANEAV----EVVLYLLKHPEVSK 384
Query: 339 TMGKRGYERVKEIF 352
            MG +  ERV++ F
Sbjct: 385 EMGAKAKERVRKNF 398

>pdb|2XMP|A Chain A, Crystal Structure Of Trehalose Synthase Tret Mutant E326a From P.Horishiki In Complex With Udp Length = 416

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 82/374 (21%), Positives = 140/374 (37%), Gaps = 61/374 (16%)
Query: 3   LAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIV 62
           L  LLR +G +  W  I+ P+E   V  +  + +          +G E++    +   + 
Sbjct: 62  LVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNAL----------QGNESLKLTEEMKELY 111
Query: 63  LNTAVA-GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMID-SHVT 120
           LN      K++D    + V          +H+ +       Y K  P +    ID S   
Sbjct: 112 LNVNRENSKFIDLSSFDYV---------LVHDPQPAALIEFYEKKSPWLWRCHIDLSSPN 162
Query: 121 AEYWKNRTRERLRIKMPDTYVVHLG---------NSKELMEVAEDNVAKR--------VL 163
            E+W+   R    ++  D Y+ HL          N   +M  + D ++++        +L
Sbjct: 163 REFWEFLRR---FVEKYDRYIFHLPEYVQPELDRNKAVIMPPSIDPLSEKNVELKQTEIL 219
Query: 164 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVIIG- 222
           R  + E   V  E  +   ++     KG        ++           +P V  +++G 
Sbjct: 220 R--ILERFDVDPEKPIITQVSRFDPWKG-------IFDVIEIYRKVKEKIPGVQLLLVGV 270
Query: 223 ---SDMNAQTKFESELRNYVMQKKIQDRVHFVN-KTLTVAPYLAAIDVLVQNSQAWGECF 278
               D      FE  LR       ++   + +      V  +  A DV++Q S   G  F
Sbjct: 271 MAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIRAG--F 328
Query: 279 GRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRL 338
           G    EAM    PV+G A GG    +V+G TG L     E +    + ++ L  H E   
Sbjct: 329 GLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVRDANEAV----EVVLYLLKHPEVSK 384
Query: 339 TMGKRGYERVKEIF 352
            MG +  ERV++ F
Sbjct: 385 EMGAKAKERVRKNF 398

>pdb|3S28|A Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose Length = 816

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 276 ECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGL-LHPV-GKEGITPLAKNIVKLATH 333
           E FG   +EAM   LP   T  GG  EI+V+G +G  + P  G +    LA    K    
Sbjct: 675 EAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKED 734
Query: 334 VERRLTMGKRGYERVKEIFQEHHMAERI 361
                 + K G +R++E +     ++R+
Sbjct: 735 PSHWDEISKGGLQRIEEKYTWQIYSQRL 762

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	377
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	1e-36
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	1e-31
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	6e-26
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	2e-23
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	7e-20
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	3e-19
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	6e-19
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	2e-18
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	9e-18
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	7e-17
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	1e-15
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	2e-12
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	5e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-07

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416

 Score =  136 bits (344), Expect = 1e-36
 Identities = 71/388 (18%), Positives = 135/388 (34%), Gaps = 53/388 (13%)

Query: 2   ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTAL----- 56
            L  LLR +G +  W  I+ P+E   V  +  + +       ++ + +E           
Sbjct: 61  SLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNALQGNESLKLTEEMKELYLNVNRENSK 120

Query: 57  -----KADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEM--RGHYFKLDYVKHLPL 109
                  D ++++       L    ++  P +     W  H      +    ++++    
Sbjct: 121 FIDLSSFDYVLVHDPQPA-ALIEFYEKKSPWL-----WRCHIDLSSPNREFWEFLRRFVE 174

Query: 110 VAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLG---NSKELMEVAEDNVAKRVLREH 166
                I  H+         R +         ++       S++ +E+ +  + +      
Sbjct: 175 KYDRYI-FHLPEYVQPELDRNKAV-------IMPPSIDPLSEKNVELKQTEILR------ 220

Query: 167 VRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS--- 223
           + E   V  E  +   ++     KG    +  + +  E       ++P V  +++G    
Sbjct: 221 ILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKE-------KIPGVQLLLVGVMAH 273

Query: 224 -DMNAQTKFESELRNYVMQKKIQDRVHFVNK-TLTVAPYLAAIDVLVQNSQAWGECFGRI 281
            D      FE  LR       ++   + +      V  +  A DV++Q S    E FG  
Sbjct: 274 DDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMS--IREGFGLT 331

Query: 282 TIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMG 341
             EAM    PV+G A GG    +V+G TG L     E      + ++ L  H E    MG
Sbjct: 332 VTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVRDANE----AVEVVLYLLKHPEVSKEMG 387

Query: 342 KRGYERVKEIFQEHHMAERIAVVLKEVL 369
            +  ERV++ F      ER   +L  + 
Sbjct: 388 AKAKERVRKNFIITKHMERYLDILNSLG 415

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394

 Score =  122 bits (308), Expect = 1e-31
 Identities = 61/322 (18%), Positives = 124/322 (38%), Gaps = 33/322 (10%)

Query: 57  KADLIVLNTAVAGKWLDAVLKEDVPRVLPNVL----WWIHEMRGHYFKLDYVKHLPLVAG 112
             D++ ++ A+       + K+ +   +  V       I  +       + ++     + 
Sbjct: 99  NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGSDPSLNNLIRFGIEQSD 158

Query: 113 AMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLG 172
            +      +    N T E ++    D   V+    + +    +           +++  G
Sbjct: 159 VVT---AVSHSLINETHELVKPN-KDIQTVYNFIDERVYFKRD--------MTQLKKEYG 206

Query: 173 VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFE 232
           +   + +   I++  + K     + +F + +  +            +++G          
Sbjct: 207 ISESEKILIHISNFRKVKRVQDVVQAFAKIVTEVD--------AKLLLVGD-----GPEF 253

Query: 233 SELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPV 292
             +   V    I+DRV F+ K   VA  LA  D+++  S    E FG + +EAMA  +P 
Sbjct: 254 CTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLS--EKESFGLVLLEAMACGVPC 311

Query: 293 LGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIF 352
           +GT  GG  E++ +G TG L  VG    T +A   ++L    E    MG+R  E V E F
Sbjct: 312 IGTRVGGIPEVIQHGDTGYLCEVGD--TTGVADQAIQLLKDEELHRNMGERARESVYEQF 369

Query: 353 QEHHMAERIAVVLKEVLKKSKS 374
           +   +  +   +  +VL+  K+
Sbjct: 370 RSEKIVSQYETIYYDVLRDDKN 391

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374

 Score =  106 bits (266), Expect = 6e-26
 Identities = 37/206 (17%), Positives = 74/206 (35%), Gaps = 16/206 (7%)

Query: 164 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 223
           RE  R+  G++ +  L   + S    KG D  + +     E        +     + +  
Sbjct: 183 REIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPE-------SLRHNTLLFVVG 235

Query: 224 DMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITI 283
               +     +      +  ++  VHF +    V+  +AA D+L+  +  + E  G + +
Sbjct: 236 QDKPR-----KFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPA--YQEAAGIVLL 288

Query: 284 EAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKR 343
           EA+   LPVL TA  G    + +   G +          L + + K  T    R+   + 
Sbjct: 289 EAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFS-QEQLNEVLRKALTQSPLRMAWAEN 347

Query: 344 GYERVKEIFQEHHMAERIAVVLKEVL 369
                      + + E+ A ++   L
Sbjct: 348 ARHYADT-QDLYSLPEKAADIITGGL 372

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394

 Score = 99.7 bits (249), Expect = 2e-23
 Identities = 56/263 (21%), Positives = 100/263 (38%), Gaps = 32/263 (12%)

Query: 118 HVTA--EYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRN 175
            +T   +Y   R +       P    +  G     ++V     A    +   R+ LG  +
Sbjct: 143 VLTYISQYTLRRFKSAFGSH-PTFEHLPSG-----VDVKRFTPATPEDKSATRKKLGFTD 196

Query: 176 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESEL 235
              + A  + +   KGQD  +    +++  +       P    +I+GS      ++ES L
Sbjct: 197 TTPVIACNSRLVPRKGQDSLI----KAMPQVIA---ARPDAQLLIVGSG-----RYESTL 244

Query: 236 RNYVMQKKIQDRVHFVNK--TLTVAPYLAAIDVLV-----QNSQAWGECFGRITIEAMAF 288
           R       +   V F+ +     +   LAA D+       +      E  G + +EA A 
Sbjct: 245 RRLA--TDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQAC 302

Query: 289 QLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERV 348
            +PV+   +GG  E V    TGL+          L++ +++L     RR  MG  G   V
Sbjct: 303 GVPVIAGTSGGAPETVTPA-TGLVVEGSDVD--KLSELLIELLDDPIRRAAMGAAGRAHV 359

Query: 349 KEIFQEHHMAERIAVVLKEVLKK 371
           +  +    M ER+  +L+   +K
Sbjct: 360 EAEWSWEIMGERLTNILQSEPRK 382

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438

 Score = 89.7 bits (223), Expect = 7e-20
 Identities = 42/216 (19%), Positives = 77/216 (35%), Gaps = 15/216 (6%)

Query: 161 RVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVI 220
               E  R  LG+     + A +  +   KG  + + +     +   ++ L V     +I
Sbjct: 227 DRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRV-----II 281

Query: 221 IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLT---VAPYLAAIDVLVQNSQAWGEC 277
            G         +   R+   +  ++ R+ F+        +     A D++   S  + E 
Sbjct: 282 CGGPSGPNATPD-TYRHMAEELGVEKRIRFL-DPRPPSELVAVYRAADIVAVPS--FNES 337

Query: 278 FGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERR 337
           FG + +EA A   PV+    GG    V  G TGLL           A  +  L    E R
Sbjct: 338 FGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPH--AWADALATLLDDDETR 395

Query: 338 LTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSK 373
           + MG+   E  +  F     A +++ +  + +    
Sbjct: 396 IRMGEDAVEHART-FSWAATAAQLSSLYNDAIANEN 430

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166

 Score = 83.0 bits (206), Expect = 3e-19
 Identities = 24/172 (13%), Positives = 51/172 (29%), Gaps = 21/172 (12%)

Query: 190 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 249
           K Q + + +      L K K      +  ++ G         E +++    +  ++    
Sbjct: 15  KNQSVLIKAV----ALSKYK----QDIVLLLKGKG-----PDEKKIKLLAQKLGVKAEFG 61

Query: 250 FVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQL-PVLGTAAGGTTEIVVNGT 308
           FVN    +   L    + V  +    E      +EA++  + PV+  +    T       
Sbjct: 62  FVNSN-ELLEILKTCTLYVHAANV--ESEAIACLEAISVGIVPVIANSPLSATRQFALDE 118

Query: 309 TGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAER 360
             L  P        L+  I     +   R  M     +     +   +   +
Sbjct: 119 RSLFEP---NNAKDLSAKIDWWLENKLERERMQNEYAKSALN-YTLENSVIQ 166

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816

 Score = 87.7 bits (217), Expect = 6e-19
 Identities = 40/229 (17%), Positives = 82/229 (35%), Gaps = 25/229 (10%)

Query: 155 EDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVP 214
           E+ +   V  +     L  + + +LF +   + R K     +  + ++  L         
Sbjct: 551 EELLYSDVENKEHLCVLKDKKKPILFTM-ARLDRVKNLSGLVEWYGKNTRL-------RE 602

Query: 215 SVHAVIIG------SDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAP-------YL 261
             + V++G      S  N +     ++ + + + K+  +  +++  +             
Sbjct: 603 LANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYIC 662

Query: 262 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPV--GKEG 319
                 VQ +    E FG   +EAM   LP   T  GG  EI+V+G +G       G + 
Sbjct: 663 DTKGAFVQPA--LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQA 720

Query: 320 ITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEV 368
              LA    K          + K G +R++E +     ++R+  +    
Sbjct: 721 ADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406

 Score = 85.0 bits (211), Expect = 2e-18
 Identities = 38/183 (20%), Positives = 68/183 (37%), Gaps = 23/183 (12%)

Query: 190 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS-DMNAQTKFESELRNYVMQKKIQDRV 248
           KG  + L     +L  +       P V  +I+G  D +   +   +L            +
Sbjct: 222 KGMAVLL----AALPKLVA---RFPDVEILIVGRGDEDELREQAGDLA---------GHL 265

Query: 249 HFVNK--TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN 306
            F+ +    T A  + + DV        GE FG + +EAMA    V+ +       ++ +
Sbjct: 266 RFLGQVDDATKASAMRSADVYCAPHL-GGESFGIVLVEAMAAGTAVVASDLDAFRRVLAD 324

Query: 307 GTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK 366
           G  G L PV       +A  ++ +    + R     R  ERV   +    ++ +I  V +
Sbjct: 325 GDAGRLVPVDDAD--GMAAALIGILEDDQLRAGYVARASERVHR-YDWSVVSAQIMRVYE 381

Query: 367 EVL 369
            V 
Sbjct: 382 TVS 384

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413

 Score = 83.3 bits (205), Expect = 9e-18
 Identities = 50/323 (15%), Positives = 99/323 (30%), Gaps = 30/323 (9%)

Query: 73  DAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERL 132
           D V+  + P V+ N L  + +       + YV  +         +     +W     + +
Sbjct: 83  DIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVS-------KNIRENLWWIFSHPKVV 135

Query: 133 RI----KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR 188
            +    K   + + + G    +  V+     K +        L   N+D+LF  +N  + 
Sbjct: 136 GVMAMSKCWISDICNYGCKVPINIVSHFVDTKTIYDARKLVGLSEYNDDVLFLNMNRNTA 195

Query: 189 GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRV 248
            K  D+++ +    +    + K+            D+++    E             +++
Sbjct: 196 RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKI 255

Query: 249 HFVNKTLT---VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVV 305
                 LT   V     A DV+V  S   GE FG  + E      P++ +A GG  +   
Sbjct: 256 MINRTVLTDERVDMMYNACDVIVNCS--SGEGFGLCSAEGAVLGKPLIISAVGGADDYFS 313

Query: 306 NGTTGLLHPVGKEGITPL--------------AKNIVKLATHVERRLTMGKRGYERVKEI 351
                 + P     +                            + R   GKR  + VK  
Sbjct: 314 GDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAFTFFKDEKNRKEYGKRVQDFVKTK 373

Query: 352 FQEHHMAERIAVVLKEVLKKSKS 374
                ++  I      +L+    
Sbjct: 374 PTWDDISSDIIDFFNSLLRVESR 396

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499

 Score = 80.9 bits (200), Expect = 7e-17
 Identities = 44/244 (18%), Positives = 90/244 (36%), Gaps = 19/244 (7%)

Query: 141 VVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR---GKGQDLFLH 197
           V+  G +  + +    +  K  + +++   LG    +L    I + SR    K     + 
Sbjct: 225 VIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMEL--PAIIASSRLDQKKNHYGLVE 282

Query: 198 SFYESLELIKEKKLEV----PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHF--- 250
           ++ ++ EL  +  L +                  + +   ++   +     + +V     
Sbjct: 283 AYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPL 342

Query: 251 VNKTLTVAPY---LAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 307
            ++      Y    +   V    S  + E FG   +EAMA  LP + T  GG  EI+  G
Sbjct: 343 NSQQELAGCYAYLASKGSVFALTS--FYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGG 400

Query: 308 TTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 367
             G+L          +A+ ++K     E      ++G +RV+E +     A     V++E
Sbjct: 401 KYGVLVDPEDPE--DIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQE 458

Query: 368 VLKK 371
           +  +
Sbjct: 459 IADR 462

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177

 Score = 73.4 bits (181), Expect = 1e-15
 Identities = 38/181 (20%), Positives = 69/181 (38%), Gaps = 28/181 (15%)

Query: 174 RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIG--SDMNAQTKF 231
           +     +  +N +   K  +L L  F +    ++++KL        I+G  S  +   ++
Sbjct: 20  KCYGDFWLSVNRIYPEKRIELQLEVFKK----LQDEKL-------YIVGWFSKGDHAERY 68

Query: 232 ESELRNYVMQKKIQDRVHFVNK--TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQ 289
             ++      K   D V F+       +    +    L+  +    E FG   IEAMA  
Sbjct: 69  ARKIM-----KIAPDNVKFLGSVSEEELIDLYSRCKGLLCTA--KDEDFGLTPIEAMASG 121

Query: 290 LPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVK 349
            PV+    GG  E V+N  TG L          +   + K++ + ++     K  + R K
Sbjct: 122 KPVIAVNEGGFKETVINEKTGYLVNADVNE---IIDAMKKVSKNPDK---FKKDCFRRAK 175

Query: 350 E 350
           E
Sbjct: 176 E 176

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413

 Score = 66.7 bits (162), Expect = 2e-12
 Identities = 46/380 (12%), Positives = 95/380 (25%), Gaps = 52/380 (13%)

Query: 2   ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRG------VQVISAKGQETINTA 55
           +L         K   I         ++      K           +Q++    +      
Sbjct: 70  KLFEQFDNKKFKKRIILTDATPNPKDLQSFKSFKYVMPEEDKDFALQIVPFNDRYNRTIP 129

Query: 56  L-KADLIVLN---TAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVA 111
           + K D+ +     TA A + + +   +        +L+ I +    +++      L    
Sbjct: 130 VAKHDIFIATAWWTAYAAQRIVSWQSDTYGIPPNKILYIIQDFEPGFYQWSSQYVLAEST 189

Query: 112 GAMIDSHVTA--EYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRE 169
                  +         +          D Y      +  L     D   K  +      
Sbjct: 190 YKYRGPQIAVFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKNYINDKRQKEKI------ 243

Query: 170 SLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQT 229
                   +L     SV R     L +    E+L++  +K         + +G       
Sbjct: 244 --------ILVYGRPSVKR-NAFTLIV----EALKIFVQKYDRSNEWKIISVGEKHKD-- 288

Query: 230 KFESELRNYVMQKKIQDRVHFVNK--TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMA 287
                     +       ++ + K      A  L    + +    +         +E   
Sbjct: 289 ----------IALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMIS--PHPSYPPLEMAH 336

Query: 288 FQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYER 347
           F L V+            +     L  +  E    +A+ +V+L      R    K     
Sbjct: 337 FGLRVITNKYENKDLSNWHSNIVSLEQLNPEN---IAETLVELCMSFNNRDVDKKESSNM 393

Query: 348 VKEI--FQEHHMAERIAVVL 365
           +  I  F E    + I   L
Sbjct: 394 MFYINEFNEFSFIKEIEEKL 413

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342

 Score = 53.2 bits (128), Expect = 5e-08
 Identities = 21/134 (15%), Positives = 36/134 (26%), Gaps = 19/134 (14%)

Query: 246 DRVHFVNK--TLTVAPYLAAIDVLV--------QNSQAWGECFGRITIEAMAFQLPVLGT 295
             V  + +         LA+   ++             W E    +  EA     PV+GT
Sbjct: 212 STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGT 271

Query: 296 AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEH 355
             G   EIV +    + +                 A      L            ++   
Sbjct: 272 GNGCLAEIVPSVGEVVGYGTD---------FAPDEARRTLAGLPASDEVRRAAVRLWGHV 322

Query: 356 HMAERIAVVLKEVL 369
            +AER     + +L
Sbjct: 323 TIAERYVEQYRRLL 336

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.0 bits (121), Expect = 4e-07
 Identities = 40/234 (17%), Positives = 76/234 (32%), Gaps = 62/234 (26%)

Query: 39  RGVQVISA-KGQETINTALKADLIVLNT----AVAGKWLDAVLKEDVPRVLPNVLWWIHE 93
           R  QV        T + +L    + L      ++  K+LD    +D+PR          E
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD-CRPQDLPR----------E 321

Query: 94  MRGHYFKLDYVKHLPLV---AGAMI-DSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKE 149
           +         +   P         I D   T + WK+   ++L   + ++ +  L    E
Sbjct: 322 V---------LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII-ESSLNVL-EPAE 370

Query: 150 LMEVAEDNVAKRVLREHV----------------RESLGVRNEDLLFAIINSVSRGKGQD 193
             ++ +      V                      + + V N+   ++++    + K   
Sbjct: 371 YRKMFDRLS---VFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE--KQPKEST 425

Query: 194 LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESE------LRNYVMQ 241
           + + S Y  LEL K K     ++H  I+    N    F+S+      L  Y   
Sbjct: 426 ISIPSIY--LEL-KVKLENEYALHRSIVDHY-NIPKTFDSDDLIPPYLDQYFYS 475

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	377
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	100.0
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	100.0
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	100.0
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	100.0
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	100.0
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	100.0
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	100.0
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	100.0
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	100.0
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	100.0
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	100.0
3vue_A	536	GBSS-I, granule-bound starch synthase 1, chloropla	100.0
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	100.0
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	100.0
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	100.0
2vsy_A	568	XCC0866; transferase, glycosyl transferase, GT-B,	100.0
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	100.0
1uqt_A	482	Alpha, alpha-trehalose-phosphate synthase; glycosy	100.0
1vgv_A	384	UDP-N-acetylglucosamine 2-epimerase; structural ge	100.0
3nb0_A	725	Glycogen [starch] synthase isoform 2; glycogen syn	100.0
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	99.97
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	99.97
3beo_A	375	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a	99.97
3t5t_A	496	Putative glycosyltransferase; GTB fold, pseudoglyc	99.96
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	99.96
2xci_A	374	KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci	99.96
1v4v_A	376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	99.95
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	99.95
3dzc_A	396	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.9
3rhz_A	339	GTF3, nucleotide sugar synthetase-like protein; gl	99.88
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	99.88
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	99.88
3ot5_A	403	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.88
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	99.82
2iyf_A	430	OLED, oleandomycin glycosyltransferase; antibiotic	99.81
3tsa_A	391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	99.79
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	99.78
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	99.76
4hwg_A	385	UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc	99.75
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	99.75
2p6p_A	384	Glycosyl transferase; X-RAY-diffraction,urdamycina	99.71
1l5w_A	796	Maltodextrin phosphorylase; enzymatic catalysis, s	99.55
2c4m_A	796	Glycogen phosphorylase; allosteric control, phosph	99.54
3q3e_A	631	HMW1C-like glycosyltransferase; N-glycosylation; 2	99.53
3h4t_A	404	Glycosyltransferase GTFA, glycosyltransferase; van	99.46
2iya_A	424	OLEI, oleandomycin glycosyltransferase; carbohydra	99.45
1iir_A	415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	99.42
4amg_A	400	Snogd; transferase, polyketide biosynthesis, GT1 f	99.4
2o6l_A	170	UDP-glucuronosyltransferase 2B7; drug metabolism,	99.39
2gj4_A	824	Glycogen phosphorylase, muscle form; transferase;	99.35
2yjn_A	441	ERYCIII, glycosyltransferase; transferase, cytochr	99.3
4gyw_A	723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	99.22
1rrv_A	416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	98.83
3hbm_A	282	UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je	98.66
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	98.56
1ygp_A	879	Yeast glycogen phosphorylase; phosphorylated form,	98.24
2c1x_A	456	UDP-glucose flavonoid 3-O glycosyltransferase; WIN	98.05
3tov_A	349	Glycosyl transferase family 9; structural genomics	98.0
3hbf_A	454	Flavonoid 3-O-glucosyltransferase; glycosyltransfe	97.97
2pq6_A	482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	97.88
1psw_A	348	ADP-heptose LPS heptosyltransferase II; structural	97.65
2acv_A	463	Triterpene UDP-glucosyl transferase UGT71G1; glyco	97.57
2vch_A	480	Hydroquinone glucosyltransferase; glycosyltransfer	97.49
2gt1_A	326	Lipopolysaccharide heptosyltransferase-1; GT-B fol	97.46
2jzc_A	224	UDP-N-acetylglucosamine transferase subunit ALG13;	97.4
1k68_A	140	Phytochrome response regulator RCPA; phosphorylate	92.54
3kht_A	144	Response regulator; PSI-II, 11023K, structural gen	92.38
1xv5_A	401	AGT, DNA alpha-glucosyltransferase; HET: DNA CME U	91.88
3heb_A	152	Response regulator receiver domain protein (CHEY);	91.48
3jte_A	143	Response regulator receiver protein; structural ge	90.59
3ilh_A	146	Two component response regulator; NYSGXRC, PSI-II,	90.43
2zay_A	147	Response regulator receiver protein; structural ge	90.32
1k66_A	149	Phytochrome response regulator RCPB; CHEY homologu	90.23
3cg4_A	142	Response regulator receiver domain protein (CHEY-;	90.19
3h1g_A	129	Chemotaxis protein CHEY homolog; sulfate-bound CHE	89.65
3grc_A	140	Sensor protein, kinase; protein structure initiati	89.62
2pln_A	137	HP1043, response regulator; signaling protein; 1.8	89.56
3h5i_A	140	Response regulator/sensory box protein/ggdef domai	89.4
1i3c_A	149	Response regulator RCP1; phytochrome, signaling pr	89.15
1qkk_A	155	DCTD, C4-dicarboxylate transport transcriptional r	88.28
3hzh_A	157	Chemotaxis response regulator (CHEY-3); phosphatas	88.21
4e7p_A	150	Response regulator; DNA binding, cytosol, transcri	88.09
3eul_A	152	Possible nitrate/nitrite response transcriptional	87.87
2qvg_A	143	Two component response regulator; NYSGXRC, PSI-2,	87.29
3gt7_A	154	Sensor protein; structural genomics, signal receiv	87.13
3lua_A	140	Response regulator receiver protein; two-component	86.67
3n53_A	140	Response regulator receiver modulated diguanylate;	86.24
2qzj_A	136	Two-component response regulator; 11017X, PSI-II,	85.54
2qsj_A	154	DNA-binding response regulator, LUXR family; struc	85.43
2rjn_A	154	Response regulator receiver:metal-dependent phosph	85.37
3hdg_A	137	Uncharacterized protein; two-component sensor acti	84.5
3hdv_A	136	Response regulator; PSI-II, structural genomics, P	84.28
3kcn_A	151	Adenylate cyclase homolog; SGX, PSI 2, structural	83.73
1jbe_A	128	Chemotaxis protein CHEY; signaling protein; 1.08A	83.55
3gl9_A	122	Response regulator; beta-sheet, surrounded by alph	83.36
3t6k_A	136	Response regulator receiver; flavodoxin-like, stru	83.21
3m6m_D	143	Sensory/regulatory protein RPFC; RPFF, REC, enoyl-	83.17
3hv2_A	153	Response regulator/HD domain protein; PSI-2, NYSGX	83.11
1dbw_A	126	Transcriptional regulatory protein FIXJ; doubly wo	83.07
3eod_A	130	Protein HNR; response regulator, phosphoprotein, t	83.06
3cnb_A	143	DNA-binding response regulator, MERR family; signa	82.68
3to5_A	134	CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, p	82.5
2j48_A	119	Two-component sensor kinase; pseudo-receiver, circ	82.33
3i42_A	127	Response regulator receiver domain protein (CHEY-	82.04
2rdm_A	132	Response regulator receiver protein; structural ge	81.96
2gkg_A	127	Response regulator homolog; social motility, recei	81.75
2qxy_A	142	Response regulator; regulation of transcription, N	81.39
2r25_B	133	Osmosensing histidine protein kinase SLN1; alpha5-	80.65
2l2q_A	109	PTS system, cellobiose-specific IIB component (CE;	80.5
4dad_A	146	Putative pilus assembly-related protein; response	80.28

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*

Probab=100.00  E-value=5.6e-45  Score=333.15  Aligned_cols=332  Identities=20%  Similarity=0.250  Sum_probs=259.1

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEE------------------ccchhHHHhhhcccEEEE
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS------------------AKGQETINTALKADLIVL   63 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~Div~~   63 (377)
                      +|+++|.++||+|++++...+.....         ...++.+..                  ...+..++++.+||+||+
T Consensus        35 ~la~~L~~~G~~V~v~~~~~~~~~~~---------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~Dvv~~  105 (394)
T 2jjm_A           35 ELGKQLAERGHEIHFITSGLPFRLNK---------VYPNIYFHEVTVNQYSVFQYPPYDLALASKMAEVAQRENLDILHV  105 (394)
T ss_dssp             HHHHHHHHTTCEEEEECSSCC----C---------CCTTEEEECCCCC----CCSCCHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred             HHHHHHHhCCCEEEEEeCCCCCcccc---------cCCceEEEecccccccccccccccHHHHHHHHHHHHHcCCCEEEE
Confidence            68999999999999999754321100         011111110                  012344556789999999


Q ss_pred             cCchhhhHHHHHhhcCCCccccceeEEeeeeccc------ccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCC
Q 017085           64 NTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGH------YFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMP  137 (377)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~------~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  137 (377)
                      |+..+..+...+...... ...|++++.|+....      .+.......++.+|.+++.|....+.+.+    .++. ..
T Consensus       106 ~~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~----~~~~-~~  179 (394)
T 2jjm_A          106 HYAIPHAICAYLAKQMIG-ERIKIVTTLHGTDITVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETHE----LVKP-NK  179 (394)
T ss_dssp             CSSTTHHHHHHHHHHHTT-TCSEEEEECCHHHHHTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHHHH----HTCC-SS
T ss_pred             cchhHHHHHHHHHHHhhc-CCCCEEEEEecCcccccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHHHH----hhCC-cc
Confidence            976544333222221111 125899999985321      12223344557899999999999888765    3333 57


Q ss_pred             CeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeE
Q 017085          138 DTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVH  217 (377)
Q Consensus       138 ~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~  217 (377)
                      ++.++|||+|.+.+.+..        +..++++++++++.++++++|++.+.||++.+++++..+.+       + ++++
T Consensus       180 ~~~vi~ngv~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~-------~-~~~~  243 (394)
T 2jjm_A          180 DIQTVYNFIDERVYFKRD--------MTQLKKEYGISESEKILIHISNFRKVKRVQDVVQAFAKIVT-------E-VDAK  243 (394)
T ss_dssp             CEEECCCCCCTTTCCCCC--------CHHHHHHTTCC---CEEEEECCCCGGGTHHHHHHHHHHHHH-------S-SCCE
T ss_pred             cEEEecCCccHHhcCCcc--------hHHHHHHcCCCCCCeEEEEeeccccccCHHHHHHHHHHHHh-------h-CCCE
Confidence            899999999988765432        34578889998888999999999999999999999997754       2 5689


Q ss_pred             EEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCC
Q 017085          218 AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA  297 (377)
Q Consensus       218 l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~  297 (377)
                      |+|+|+|     +..+++++.++++++.++|.|+|+.+++.++|+.||++++||.  .|++|++++|||++|+|||+++.
T Consensus       244 l~i~G~g-----~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~PvI~~~~  316 (394)
T 2jjm_A          244 LLLVGDG-----PEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSE--KESFGLVLLEAMACGVPCIGTRV  316 (394)
T ss_dssp             EEEECCC-----TTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSEEEECCS--CCSCCHHHHHHHHTTCCEEEECC
T ss_pred             EEEECCc-----hHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCEEEeccc--cCCCchHHHHHHhcCCCEEEecC
Confidence            9999998     4678899999999999999999999999999999999999999  99999999999999999999999


Q ss_pred             CCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccc
Q 017085          298 GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSK  373 (377)
Q Consensus       298 ~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~  373 (377)
                      ++..|++.++.+|++++++|  +++++++|.++++|++.+.++++++++.+.++|+|+.+++++.++|++++++.+
T Consensus       317 ~~~~e~v~~~~~g~~~~~~d--~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  390 (394)
T 2jjm_A          317 GGIPEVIQHGDTGYLCEVGD--TTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLRDDK  390 (394)
T ss_dssp             TTSTTTCCBTTTEEEECTTC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC----
T ss_pred             CChHHHhhcCCceEEeCCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhh
Confidence            99999999999999999988  999999999999999999999999999998999999999999999999987654

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*

Probab=100.00  E-value=5.3e-44  Score=331.19  Aligned_cols=346  Identities=16%  Similarity=0.093  Sum_probs=266.9

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhh----------hhhhcccCceEEEccc----------------h------
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSL----------EHKMWDRGVQVISAKG----------------Q------   49 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~----------------~------   49 (377)
                      +|+++|+++||+|+|+++..+.........+          .......|++++....                .      
T Consensus        26 ~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (439)
T 3fro_A           26 AISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTF  105 (439)
T ss_dssp             HHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEEESGGGGCSSTTCSHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEecchhccccccccCCcchhhhhhHHH
Confidence            6899999999999999976543221100000          0000234555543321                0      


Q ss_pred             ----hHHHh-----hhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccc------------------hh
Q 017085           50 ----ETINT-----ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK------------------LD  102 (377)
Q Consensus        50 ----~~~~~-----~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~------------------~~  102 (377)
                          ..+.+     ..+||+||+|+...+.....+..    ....|++++.|+.....+.                  ..
T Consensus       106 ~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~----~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (439)
T 3fro_A          106 GRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKK----YFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDP  181 (439)
T ss_dssp             HHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHH----HHCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSSEECH
T ss_pred             HHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhh----ccCCCEEEEecccccccCchHHhCccccccccccceeeH
Confidence                11112     34899999998655433332221    1235899999987542111                  22


Q ss_pred             hhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEE
Q 017085          103 YVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI  182 (377)
Q Consensus       103 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~  182 (377)
                      ....+..+|.++++|....+....    .++.+..++.+||||+|.+.|.+...+......+..++++++++++ ++|++
T Consensus       182 ~~~~~~~ad~ii~~S~~~~~~~~~----~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~  256 (439)
T 3fro_A          182 EHTGGYIADIVTTVSRGYLIDEWG----FFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMF  256 (439)
T ss_dssp             HHHHHHHCSEEEESCHHHHHHTHH----HHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTCCSC-EEEEE
T ss_pred             hhhhhhhccEEEecCHHHHHHHhh----hhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCCCCC-cEEEE
Confidence            233446889999999988776333    4556789999999999998886653222233457889999999887 99999


Q ss_pred             ecccc-ccchhHHHHHHHHHHHHHHhhhcccC--CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCH
Q 017085          183 INSVS-RGKGQDLFLHSFYESLELIKEKKLEV--PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTV  257 (377)
Q Consensus       183 ~G~~~-~~Kg~~~ll~a~~~l~~~l~~~~~~~--~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~  257 (377)
                      +||+. +.||++.++++++.+.+       +.  ++++|+|+|+|..   .+.+.+++++++++  +.+.|.|+.  +++
T Consensus       257 ~G~~~~~~Kg~~~li~a~~~l~~-------~~~~~~~~l~i~G~g~~---~~~~~l~~~~~~~~--~~~~~~g~~~~~~~  324 (439)
T 3fro_A          257 IGRFDRGQKGVDVLLKAIEILSS-------KKEFQEMRFIIIGKGDP---ELEGWARSLEEKHG--NVKVITEMLSREFV  324 (439)
T ss_dssp             ECCSSCTTBCHHHHHHHHHHHHT-------SGGGGGEEEEEECCCCH---HHHHHHHHHHHHCT--TEEEECSCCCHHHH
T ss_pred             EcccccccccHHHHHHHHHHHHh-------cccCCCeEEEEEcCCCh---hHHHHHHHHHhhcC--CEEEEcCCCCHHHH
Confidence            99999 99999999999997754       33  6899999999852   34588999999988  688899954  779


Q ss_pred             HHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhh-CHHH
Q 017085          258 APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVER  336 (377)
Q Consensus       258 ~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~-~~~~  336 (377)
                      .++|+.||++|+||.  .|++|++++|||++|+|||+|+.++..|++.++ +|++++++|  +++++++|.++++ +++.
T Consensus       325 ~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d--~~~la~~i~~ll~~~~~~  399 (439)
T 3fro_A          325 RELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGD--PGELANAILKALELSRSD  399 (439)
T ss_dssp             HHHHTTCSEEEECBS--CCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEECTTC--HHHHHHHHHHHHHHTTTT
T ss_pred             HHHHHHCCEEEeCCC--CCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEeCCCC--HHHHHHHHHHHHhcCHHH
Confidence            999999999999999  899999999999999999999999999999877 999999988  9999999999999 9999


Q ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcccc
Q 017085          337 RLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKS  374 (377)
Q Consensus       337 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  374 (377)
                      +.++++++++.+ ++|+|+.+++++.++|++++++..+
T Consensus       400 ~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~  436 (439)
T 3fro_A          400 LSKFRENCKKRA-MSFSWEKSAERYVKAYTGSIDRAFD  436 (439)
T ss_dssp             THHHHHHHHHHH-HTSCHHHHHHHHHHHHHTCSCCBCS
T ss_pred             HHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHHhhhh
Confidence            999999999999 6799999999999999999876544

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*

Probab=100.00  E-value=3.3e-44  Score=337.97  Aligned_cols=351  Identities=15%  Similarity=0.148  Sum_probs=264.9

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcc-hhHhhhhhhhhcccCceEEEcc---------------------chhHHHhh--hc
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEE-DEVIYSLEHKMWDRGVQVISAK---------------------GQETINTA--LK   57 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~--~~   57 (377)
                      +|+++|.+.||+|+|++....... ..+...+.......|++++...                     .+..++++  .+
T Consensus        41 ~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~  120 (499)
T 2r60_A           41 EVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIPFGGDKFLPKEELWPYLHEYVNKIINFYREEGKF  120 (499)
T ss_dssp             HHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEECCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEecCCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            689999999999999997643211 1100000000012455553321                     11223344  48


Q ss_pred             ccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccc----------------------hhhhccccccceeee
Q 017085           58 ADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK----------------------LDYVKHLPLVAGAMI  115 (377)
Q Consensus        58 ~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~----------------------~~~~~~~~~~~~~~~  115 (377)
                      ||+||+|....+.+...+...    ...|++++.|+.......                      ......++.+|.+++
T Consensus       121 ~Divh~~~~~~~~~~~~~~~~----~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~  196 (499)
T 2r60_A          121 PQVVTTHYGDGGLAGVLLKNI----KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIV  196 (499)
T ss_dssp             CSEEEEEHHHHHHHHHHHHHH----HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEE
T ss_pred             CCEEEEcCCcchHHHHHHHHh----cCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEE
Confidence            999999976544332222211    124789999986421110                      011334578999999


Q ss_pred             eccchhhHhhhhhhhh--hh-c----cCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhC-----CCCCCeEEEEe
Q 017085          116 DSHVTAEYWKNRTRER--LR-I----KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLG-----VRNEDLLFAII  183 (377)
Q Consensus       116 ~s~~~~~~~~~~~~~~--~~-~----~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~-----~~~~~~~i~~~  183 (377)
                      +|....+.+.+    .  +| +    +..++.|||||+|.+.|.+...    ...+..+|+++|     ++++.++|+++
T Consensus       197 ~S~~~~~~~~~----~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~i~~v  268 (499)
T 2r60_A          197 STSQERFGQYS----HDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYG----DKIKAKITKYLERDLGSERMELPAIIAS  268 (499)
T ss_dssp             SSHHHHHHTTT----SGGGTTTCCTTCGGGEEECCCCBCTTTSSSCCC----HHHHHHHHHHHHHHSCGGGTTSCEEEEC
T ss_pred             CCHHHHHHHHh----hhcccccccccCCCCeEEECCCcChhhcCccch----hhhHHHHHHHhcccccccCCCCcEEEEe
Confidence            99999887764    4  56 5    6678999999999887754321    122466788888     87888999999


Q ss_pred             ccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCc----------ccHHHHHHHHHHHhcCCCCcEEEecC
Q 017085          184 NSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA----------QTKFESELRNYVMQKKIQDRVHFVNK  253 (377)
Q Consensus       184 G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~----------~~~~~~~l~~~~~~~~~~~~v~~~g~  253 (377)
                      ||+.+.||++.+++|+..+.+...      ..++++|+|+....          +.++.++++++++++++.++|+|+|+
T Consensus       269 Grl~~~Kg~~~li~a~~~l~~~~~------~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~  342 (499)
T 2r60_A          269 SRLDQKKNHYGLVEAYVQNKELQD------KANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPL  342 (499)
T ss_dssp             SCCCGGGCHHHHHHHHHTCHHHHH------HCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEEC
T ss_pred             ecCccccCHHHHHHHHHHHHHhCC------CceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCC
Confidence            999999999999999997754321      24689999983211          11237899999999999999999999


Q ss_pred             c--CCHHHHHHhc----CEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHH
Q 017085          254 T--LTVAPYLAAI----DVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNI  327 (377)
Q Consensus       254 ~--~~~~~~~~~a----dv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i  327 (377)
                      +  +++.++|+.|    |++|+||.  .|+||++++|||++|+|||+|+.++..|++.++.+|++++++|  +++|+++|
T Consensus       343 v~~~~~~~~~~~a~~~~dv~v~pS~--~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d--~~~la~~i  418 (499)
T 2r60_A          343 NSQQELAGCYAYLASKGSVFALTSF--YEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPED--PEDIARGL  418 (499)
T ss_dssp             CSHHHHHHHHHHHHHTTCEEEECCS--CBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTC--HHHHHHHH
T ss_pred             CCHHHHHHHHHhcCcCCCEEEECcc--cCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCCCC--HHHHHHHH
Confidence            7  7899999999    99999999  8999999999999999999999999999999988999999988  99999999


Q ss_pred             HHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcccc
Q 017085          328 VKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKS  374 (377)
Q Consensus       328 ~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  374 (377)
                      .++++|++.+.++++++++.+.++|||+.+++++.++|++++.+.+.
T Consensus       419 ~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~~  465 (499)
T 2r60_A          419 LKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKDE  465 (499)
T ss_dssp             HHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC---
T ss_pred             HHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhh
Confidence            99999999999999999999998999999999999999999876543

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*

Probab=100.00  E-value=1.6e-43  Score=327.94  Aligned_cols=341  Identities=18%  Similarity=0.214  Sum_probs=260.9

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEcc--------------ch-------hHH-Hhhh-cc
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK--------------GQ-------ETI-NTAL-KA   58 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~-------~~~-~~~~-~~   58 (377)
                      +|+++|.+.||+|++++..........      .....+++++...              ..       ... ++.. +|
T Consensus        50 ~la~~L~~~G~~V~v~~~~~~~~~~~~------~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (438)
T 3c48_A           50 STATELAKQGIEVDIYTRATRPSQGEI------VRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTY  123 (438)
T ss_dssp             HHHHHHHHTTCEEEEEEECCCGGGCSE------EEEETTEEEEEECCSCSSSCCGGGGGGGHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHhcCCEEEEEecCCCCCCccc------ccccCCeEEEEecCCCccccchhHHHHHHHHHHHHHHHHHHhccCCC
Confidence            689999999999999997653211100      0011234332211              00       111 2222 59


Q ss_pred             cEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeeccccc--------------chhhhccccccceeeeeccchhhHh
Q 017085           59 DLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYF--------------KLDYVKHLPLVAGAMIDSHVTAEYW  124 (377)
Q Consensus        59 Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~--------------~~~~~~~~~~~~~~~~~s~~~~~~~  124 (377)
                      |+||+|....+.....+...    ...|++++.|+......              .......++.+|.+++.|....+.+
T Consensus       124 Div~~~~~~~~~~~~~~~~~----~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~  199 (438)
T 3c48_A          124 DLIHSHYWLSGQVGWLLRDL----WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDL  199 (438)
T ss_dssp             SEEEEEHHHHHHHHHHHHHH----HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHH
T ss_pred             CEEEeCCccHHHHHHHHHHH----cCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHH
Confidence            99999975433322222211    12578999998742110              0011234578999999999998887


Q ss_pred             hhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHH
Q 017085          125 KNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLE  204 (377)
Q Consensus       125 ~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~  204 (377)
                      .+    .+|++..++.+||||+|.+.+.+...     ..+..+|++++++++.++|+++|++.+.||++.+++++..+.+
T Consensus       200 ~~----~~g~~~~k~~vi~ngvd~~~~~~~~~-----~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~  270 (438)
T 3c48_A          200 MH----HYDADPDRISVVSPGADVELYSPGND-----RATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFD  270 (438)
T ss_dssp             HH----HHCCCGGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHH
T ss_pred             HH----HhCCChhheEEecCCccccccCCccc-----chhhhhHHhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHh
Confidence            65    57778889999999999887654321     1134578899998899999999999999999999999998765


Q ss_pred             HHhhhcccCC--CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccch
Q 017085          205 LIKEKKLEVP--SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGR  280 (377)
Q Consensus       205 ~l~~~~~~~~--~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~  280 (377)
                             +.|  +++|+|+|+.... .++.+.++++++++++.++|+|+|++  +++.++|+.||++|+||.  .|++|+
T Consensus       271 -------~~p~~~~~l~i~G~~~~~-g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~  340 (438)
T 3c48_A          271 -------RDPDRNLRVIICGGPSGP-NATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSF--NESFGL  340 (438)
T ss_dssp             -------HCTTCSEEEEEECCBC-------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCS--CCSSCH
T ss_pred             -------hCCCcceEEEEEeCCCCC-CcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECcc--ccCCch
Confidence                   224  7999999982110 04678899999999999999999998  789999999999999999  899999


Q ss_pred             HHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 017085          281 ITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAER  360 (377)
Q Consensus       281 ~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~  360 (377)
                      +++|||++|+|||+++.++..+++.++.+|++++++|  +++++++|.++++|++.+.++++++++.+.+ |+|+.++++
T Consensus       341 ~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d--~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~  417 (438)
T 3c48_A          341 VAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHS--PHAWADALATLLDDDETRIRMGEDAVEHART-FSWAATAAQ  417 (438)
T ss_dssp             HHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred             HHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh-CCHHHHHHH
Confidence            9999999999999999999999999999999999888  9999999999999999999999999999988 999999999


Q ss_pred             HHHHHHHHHhcccc
Q 017085          361 IAVVLKEVLKKSKS  374 (377)
Q Consensus       361 ~~~~~~~~~~~~~~  374 (377)
                      +.++|++++.+.+.
T Consensus       418 ~~~~~~~~~~~~~~  431 (438)
T 3c48_A          418 LSSLYNDAIANENV  431 (438)
T ss_dssp             HHHHHHHHHHTCCC
T ss_pred             HHHHHHHHhhhccc
Confidence            99999999987643

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*

Probab=100.00  E-value=2.4e-43  Score=324.65  Aligned_cols=336  Identities=18%  Similarity=0.211  Sum_probs=251.7

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhccc-CceEEE--cc-------chhHHHhhhcccEEEEcCchhhhH
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVIS--AK-------GQETINTALKADLIVLNTAVAGKW   71 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~-------~~~~~~~~~~~Div~~~~~~~~~~   71 (377)
                      +|+++|.+.||+|++++.............+...+... .+.+..  ..       ....+++..+||+||+|+.....+
T Consensus        61 ~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~  140 (416)
T 2x6q_A           61 SLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNALQGNESLKLTEEMKELYLNVNRENSKFIDLSSFDYVLVHDPQPAAL  140 (416)
T ss_dssp             HHHHHHHHTTCEEEEEECCCCHHHHHHHHHHHHHHTTCCSCCCCHHHHHHHHHHHHHHHHSSCGGGSSEEEEESSTTGGG
T ss_pred             HHHHHHHhCCCeEEEEEccCCcchhhhhcccceeecccccccccHHHHHHHHHHHHHHHHHHhhcCCCEEEEeccchhhH
Confidence            58999999999999998765432211111111111111 111100  00       112223456999999998765433


Q ss_pred             HHHHhhcCCCccccceeEEeeeecccccc---hhhhccccccceee-eeccchhhHhhhhhhhhhhccCCCeEEEEcCCh
Q 017085           72 LDAVLKEDVPRVLPNVLWWIHEMRGHYFK---LDYVKHLPLVAGAM-IDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNS  147 (377)
Q Consensus        72 ~~~~~~~~~~~~~~~~v~~~h~~~~~~~~---~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~  147 (377)
                      .. +.    ... .|++++.|+.......   ....+.+..++.++ ++|....+.          ++..++.+||||+|
T Consensus       141 ~~-~~----~~~-~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~----------~~~~~~~vi~ngvd  204 (416)
T 2x6q_A          141 IE-FY----EKK-SPWLWRCHIDLSSPNREFWEFLRRFVEKYDRYIFHLPEYVQPE----------LDRNKAVIMPPSID  204 (416)
T ss_dssp             GG-GS----CCC-SCEEEECCSCCSSCCHHHHHHHHHHHTTSSEEEESSGGGSCTT----------SCTTTEEECCCCBC
T ss_pred             HH-HH----Hhc-CCEEEEEccccCCccHHHHHHHHHHHHhCCEEEEechHHHHhh----------CCccceEEeCCCCC
Confidence            22 11    111 6899999976443211   22233455667766 555544332          33468999999999


Q ss_pred             hhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCc
Q 017085          148 KELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA  227 (377)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~  227 (377)
                      ...+......   ...+..+|++++++++.++++++||+.+.||++.+++++..+.+       +.++++|+|+|+++..
T Consensus       205 ~~~~~~~~~~---~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~-------~~~~~~l~i~G~g~~~  274 (416)
T 2x6q_A          205 PLSEKNVELK---QTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKE-------KIPGVQLLLVGVMAHD  274 (416)
T ss_dssp             TTSTTTSCCC---HHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHH-------HCTTCEEEEEECCCTT
T ss_pred             hhhhcccccC---hhhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHHHHH-------hCCCeEEEEEecCccc
Confidence            8655322111   12356788999999899999999999999999999999998765       3478999999998654


Q ss_pred             ccHHHHHHHHHHHhcCCCCcEEEecCcC-----CHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCccc
Q 017085          228 QTKFESELRNYVMQKKIQDRVHFVNKTL-----TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTE  302 (377)
Q Consensus       228 ~~~~~~~l~~~~~~~~~~~~v~~~g~~~-----~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e  302 (377)
                      .+.+.+.++++++++++.++|+|+|+..     ++.++|+.||++++||.  .|+||++++|||++|+|||+|+.++..|
T Consensus       275 ~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~--~E~~~~~~lEAma~G~PvI~~~~~g~~e  352 (416)
T 2x6q_A          275 DPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSI--REGFGLTVTEAMWKGKPVIGRAVGGIKF  352 (416)
T ss_dssp             CHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCS--SCSSCHHHHHHHHTTCCEEEESCHHHHH
T ss_pred             chhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCC--cCCCccHHHHHHHcCCCEEEccCCCChh
Confidence            3345678899999999999999999653     79999999999999999  8999999999999999999999999999


Q ss_pred             ceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 017085          303 IVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVL  369 (377)
Q Consensus       303 ~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  369 (377)
                      ++.++.+|++++  |  +++++++|.++++|++.+.++++++++.+.++|+|+.+++++.++|++++
T Consensus       353 ~i~~~~~g~l~~--d--~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~  415 (416)
T 2x6q_A          353 QIVDGETGFLVR--D--ANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHMERYLDILNSLG  415 (416)
T ss_dssp             HCCBTTTEEEES--S--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred             heecCCCeEEEC--C--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence            999999999998  5  99999999999999999999999999999889999999999999998765

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*

Probab=100.00  E-value=5.8e-43  Score=319.69  Aligned_cols=332  Identities=20%  Similarity=0.238  Sum_probs=264.2

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEcc------------chhHHHhhhcccEEEEcCchhh
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK------------GQETINTALKADLIVLNTAVAG   69 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~Div~~~~~~~~   69 (377)
                      +|+++|  .||+|++++........      .......++.++...            .+..++++.+||+||+|+....
T Consensus        27 ~l~~~L--~g~~v~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~Dvv~~~~~~~~   98 (394)
T 3okp_A           27 DFIATQ--DPESIVVFASTQNAEEA------HAYDKTLDYEVIRWPRSVMLPTPTTAHAMAEIIREREIDNVWFGAAAPL   98 (394)
T ss_dssp             HHHTTS--CGGGEEEEEECSSHHHH------HHHHTTCSSEEEEESSSSCCSCHHHHHHHHHHHHHTTCSEEEESSCTTG
T ss_pred             HHHHHh--cCCeEEEEECCCCccch------hhhccccceEEEEccccccccchhhHHHHHHHHHhcCCCEEEECCcchH
Confidence            567788  59999999987643210      111123456554432            3455667789999999987655


Q ss_pred             hHHHHHhhcCCCccccceeEEeeeecccc-----cchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEc
Q 017085           70 KWLDAVLKEDVPRVLPNVLWWIHEMRGHY-----FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHL  144 (377)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~v~~~h~~~~~~-----~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~n  144 (377)
                      .++..+.+..   ..++++++.|+....+     ........++.+|.+++.|....+.+.+    .++ +..++.++||
T Consensus        99 ~~~~~~~~~~---~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----~~~-~~~~~~vi~n  170 (394)
T 3okp_A           99 ALMAGTAKQA---GASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKS----AFG-SHPTFEHLPS  170 (394)
T ss_dssp             GGGHHHHHHT---TCSEEEEECCSTHHHHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHH----HHC-SSSEEEECCC
T ss_pred             HHHHHHHHhc---CCCcEEEEeccchhhhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHH----hcC-CCCCeEEecC
Confidence            4444333221   1246888999754322     1223345568899999999999888875    333 4578999999


Q ss_pred             CChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecC
Q 017085          145 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSD  224 (377)
Q Consensus       145 gi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~  224 (377)
                      |+|.+.+.+...     ..+..++++++++++.++++++|++.+.||++.+++++..+.+       +.++++|+|+|++
T Consensus       171 gv~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~-------~~~~~~l~i~G~g  238 (394)
T 3okp_A          171 GVDVKRFTPATP-----EDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIA-------ARPDAQLLIVGSG  238 (394)
T ss_dssp             CBCTTTSCCCCH-----HHHHHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHHHHHHH-------HSTTCEEEEECCC
T ss_pred             CcCHHHcCCCCc-----hhhHHHHHhcCCCcCceEEEEEeccccccCHHHHHHHHHHHHh-------hCCCeEEEEEcCc
Confidence            999987754221     2257789999999888999999999999999999999997765       3489999999998


Q ss_pred             CCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCC-------CccchHHHHHHHcCCcEEEe
Q 017085          225 MNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWG-------ECFGRITIEAMAFQLPVLGT  295 (377)
Q Consensus       225 ~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~-------e~~~~~~~Ea~a~g~PvI~s  295 (377)
                           ++.+.+++++  .++.++|+|+|++  +++.++|+.||++++||.  .       |++|++++|||++|+|||++
T Consensus       239 -----~~~~~l~~~~--~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~--~~~~~~~~e~~~~~~~Ea~a~G~PvI~~  309 (394)
T 3okp_A          239 -----RYESTLRRLA--TDVSQNVKFLGRLEYQDMINTLAAADIFAMPAR--TRGGGLDVEGLGIVYLEAQACGVPVIAG  309 (394)
T ss_dssp             -----TTHHHHHHHT--GGGGGGEEEEESCCHHHHHHHHHHCSEEEECCC--CBGGGTBCCSSCHHHHHHHHTTCCEEEC
T ss_pred             -----hHHHHHHHHH--hcccCeEEEcCCCCHHHHHHHHHhCCEEEecCc--cccccccccccCcHHHHHHHcCCCEEEe
Confidence                 4677788777  5667899999998  899999999999999999  7       99999999999999999999


Q ss_pred             CCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccc
Q 017085          296 AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSK  373 (377)
Q Consensus       296 ~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~  373 (377)
                      +.++..|++.++ +|++++++|  +++++++|.++++|++.+.++++++++.+.++|+|+.+++++.++|+++..+..
T Consensus       310 ~~~~~~e~i~~~-~g~~~~~~d--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~~~  384 (394)
T 3okp_A          310 TSGGAPETVTPA-TGLVVEGSD--VDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRKLA  384 (394)
T ss_dssp             SSTTGGGGCCTT-TEEECCTTC--HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC---
T ss_pred             CCCChHHHHhcC-CceEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccCcc
Confidence            999999999998 999999988  999999999999999999999999999999999999999999999998765443

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A

Probab=100.00  E-value=1.1e-42  Score=326.47  Aligned_cols=294  Identities=16%  Similarity=0.128  Sum_probs=230.8

Q ss_pred             hhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc-cc-------------------------hhhhcccc
Q 017085           55 ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-FK-------------------------LDYVKHLP  108 (377)
Q Consensus        55 ~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~-~~-------------------------~~~~~~~~  108 (377)
                      ..+||+||+|+...+.+...+...  .....|++++.|+..... +.                         ......+.
T Consensus       128 ~~~~DiIh~~~~~~~~~~~~~~~~--~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (485)
T 1rzu_A          128 GWRPDMVHAHDWQAAMTPVYMRYA--ETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQ  205 (485)
T ss_dssp             SCCCSEEEEEHHHHTTHHHHHHHS--SSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHH
T ss_pred             CCCCCEEEecccchhHHHHHHhhc--ccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHh
Confidence            568999999985544332222221  112358999999864210 00                         11122346


Q ss_pred             ccceeeeeccchhhHhhhhhhhhhh--------ccCCCeEEEEcCChhhhHHHhhhh-----------hhhhhhHHHHHH
Q 017085          109 LVAGAMIDSHVTAEYWKNRTRERLR--------IKMPDTYVVHLGNSKELMEVAEDN-----------VAKRVLREHVRE  169 (377)
Q Consensus       109 ~~~~~~~~s~~~~~~~~~~~~~~~~--------~~~~~~~vi~ngi~~~~~~~~~~~-----------~~~~~~~~~~r~  169 (377)
                      .+|.++++|....+.+.+.   .+|        .+..++.+||||+|.+.|.+....           ......+..+|+
T Consensus       206 ~ad~vi~~S~~~~~~~~~~---~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  282 (485)
T 1rzu_A          206 TATALSTVSPSYAEEILTA---EFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAE  282 (485)
T ss_dssp             HCSEEEESCHHHHHHTTSH---HHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHH
T ss_pred             hcCEEEecCHhHHHHHhcc---ccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHH
Confidence            7899999999998877642   123        456789999999998877543211           011223577899


Q ss_pred             HhCCCCC-CeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcE
Q 017085          170 SLGVRNE-DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRV  248 (377)
Q Consensus       170 ~~~~~~~-~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v  248 (377)
                      +++++++ .++|+++||+.++||++.+++|+..+.+         ++++|+|+|+|+.   ++.+.+++++++++  ++|
T Consensus       283 ~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~---------~~~~l~ivG~g~~---~~~~~l~~~~~~~~--~~v  348 (485)
T 1rzu_A          283 HFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS---------LGGRLVVLGAGDV---ALEGALLAAASRHH--GRV  348 (485)
T ss_dssp             HHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH---------TTCEEEEEECBCH---HHHHHHHHHHHHTT--TTE
T ss_pred             hcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh---------cCceEEEEeCCch---HHHHHHHHHHHhCC--CcE
Confidence            9999875 6799999999999999999999998755         6899999999842   36788899988885  678


Q ss_pred             E-EecCc-CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecC---------cceeeecCCC
Q 017085          249 H-FVNKT-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG---------TTGLLHPVGK  317 (377)
Q Consensus       249 ~-~~g~~-~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~---------~~g~~~~~~~  317 (377)
                      + |.|+. +++.++|+.||++|+||.  .|+||++++|||+||+|||+|+.||+.|++.++         .+|++++++|
T Consensus       349 ~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d  426 (485)
T 1rzu_A          349 GVAIGYNEPLSHLMQAGCDAIIIPSR--FEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVT  426 (485)
T ss_dssp             EEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCS
T ss_pred             EEecCCCHHHHHHHHhcCCEEEECcc--cCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCC
Confidence            7 78887 445899999999999999  999999999999999999999999999999988         8999999988


Q ss_pred             CChhHHHHHHHHHh---hCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcccc
Q 017085          318 EGITPLAKNIVKLA---THVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKS  374 (377)
Q Consensus       318 ~~~~~la~~i~~l~---~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  374 (377)
                        +++|+++|.+++   +|++.+.++++++++   ++|||+.+++++.++|++++.....
T Consensus       427 --~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~~y~~~~~~~~~  481 (485)
T 1rzu_A          427 --LDGLKQAIRRTVRYYHDPKLWTQMQKLGMK---SDVSWEKSAGLYAALYSQLISKGHH  481 (485)
T ss_dssp             --HHHHHHHHHHHHHHHTCHHHHHHHHHHHHT---CCCBHHHHHHHHHHHHHHHTC----
T ss_pred             --HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH---HhCChHHHHHHHHHHHHHhhCCCCC
Confidence              999999999999   799999999999874   7899999999999999999877655

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A

Probab=100.00  E-value=8.2e-42  Score=320.56  Aligned_cols=293  Identities=14%  Similarity=0.111  Sum_probs=228.6

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc-cc-------------------------hhhhccccc
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-FK-------------------------LDYVKHLPL  109 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~-~~-------------------------~~~~~~~~~  109 (377)
                      .+||+||+|+...+.+...+..   .....|++++.|+..... +.                         ......+..
T Consensus       128 ~~~Divh~~~~~~~~~~~~~~~---~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (485)
T 2qzs_A          128 WRPDVVHAHDWHAGLAPAYLAA---RGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYY  204 (485)
T ss_dssp             CCCSEEEEETGGGTTHHHHHHH---TTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHH
T ss_pred             CCCCEEEeeccchhHHHHHHhh---ccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHh
Confidence            6899999998654433222221   112358999999864210 00                         111223467


Q ss_pred             cceeeeeccchhhHhhhhhhhhhhc--------cC--CCeEEEEcCChhhhHHHhhhh-----------hhhhhhHHHHH
Q 017085          110 VAGAMIDSHVTAEYWKNRTRERLRI--------KM--PDTYVVHLGNSKELMEVAEDN-----------VAKRVLREHVR  168 (377)
Q Consensus       110 ~~~~~~~s~~~~~~~~~~~~~~~~~--------~~--~~~~vi~ngi~~~~~~~~~~~-----------~~~~~~~~~~r  168 (377)
                      +|.++++|....+.+.+.   .+|.        +.  .++.+||||+|.+.|.+....           ......+..+|
T Consensus       205 ad~vi~~S~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  281 (485)
T 2qzs_A          205 ADHITAVSPTYAREITEP---QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQ  281 (485)
T ss_dssp             CSEEEESSHHHHHHTTSH---HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHH
T ss_pred             cCeEEecCHHHHHHHhcc---ccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHH
Confidence            899999999988877642   1343        22  789999999998877543210           01122357789


Q ss_pred             HHhCCCC--CCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCC
Q 017085          169 ESLGVRN--EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQD  246 (377)
Q Consensus       169 ~~~~~~~--~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~  246 (377)
                      +++++++  +.++|+++||+.+.||++.+++|+..+.+         ++++|+|+|+|++   ++.+.+++++++++  +
T Consensus       282 ~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~---------~~~~l~ivG~g~~---~~~~~l~~~~~~~~--~  347 (485)
T 2qzs_A          282 IAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE---------QGGQLALLGAGDP---VLQEGFLAAAAEYP--G  347 (485)
T ss_dssp             HHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH---------TTCEEEEEEEECH---HHHHHHHHHHHHST--T
T ss_pred             HHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh---------CCcEEEEEeCCch---HHHHHHHHHHHhCC--C
Confidence            9999986  77999999999999999999999998755         5899999999742   36788899998886  6


Q ss_pred             cEE-EecCc-CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecC---------cceeeecC
Q 017085          247 RVH-FVNKT-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG---------TTGLLHPV  315 (377)
Q Consensus       247 ~v~-~~g~~-~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~---------~~g~~~~~  315 (377)
                      +|+ |.|+. +++.++|+.||++|+||.  .|+||++++|||+||+|||+|+.||+.|++.++         .+|+++++
T Consensus       348 ~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~  425 (485)
T 2qzs_A          348 QVGVQIGYHEAFSHRIMGGADVILVPSR--FEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFED  425 (485)
T ss_dssp             TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECS
T ss_pred             cEEEeCCCCHHHHHHHHHhCCEEEECCc--cCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEECC
Confidence            786 88887 446899999999999999  999999999999999999999999999999988         89999999


Q ss_pred             CCCChhHHHHHHHHHh---hCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccc
Q 017085          316 GKEGITPLAKNIVKLA---THVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKSH  375 (377)
Q Consensus       316 ~~~~~~~la~~i~~l~---~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  375 (377)
                      +|  +++|+++|.+++   +|++.+.++++++++   ++|||+.+++++.++|++++.+...+
T Consensus       426 ~d--~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~ly~~~~~~~~~~  483 (485)
T 2qzs_A          426 SN--AWSLLRAIRRAFVLWSRPSLWRFVQRQAMA---MDFSWQVAAKSYRELYYRLKLEHHHH  483 (485)
T ss_dssp             SS--HHHHHHHHHHHHHHHTSHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHHC------
T ss_pred             CC--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHh---hcCCHHHHHHHHHHHHHHhhhhhccc
Confidence            88  999999999999   799999999999874   78999999999999999987765543

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*

Probab=100.00  E-value=4.8e-42  Score=315.69  Aligned_cols=336  Identities=14%  Similarity=0.143  Sum_probs=255.5

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcch-hHhh----hhhhhhcccCce--EEEccchhHHHhhhcccEEEEcCchhhhHHHH
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEED-EVIY----SLEHKMWDRGVQ--VISAKGQETINTALKADLIVLNTAVAGKWLDA   74 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~-~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~   74 (377)
                      +|+++|++. |+|++++........ ....    .....+  ..+.  ..........++..+||+||+|..........
T Consensus        22 ~l~~~L~~~-~~V~v~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~Div~~~~~~~~~~~~~   98 (413)
T 3oy2_A           22 AIVPRISKA-HEVIVFGIHAFGRSVHANIEEFDAQTAEHV--RGLNEQGFYYSGLSEFIDVHKPDIVMIYNDPIVIGNYL   98 (413)
T ss_dssp             HHHHHHTTT-SEEEEEEESCCSCCSCSSSEEEEHHHHHHH--TTCCSTTCCHHHHHHHHHHHCCSEEEEEECHHHHHHHH
T ss_pred             HHHHHHHhc-CCeEEEeecCCCcccccccccCCccccccc--cccccccchHHHHHHHHHhcCCCEEEEcchHHHHHHHH
Confidence            589999999 999999965432110 0000    000000  1111  01111234556778999999995443322222


Q ss_pred             HhhcCCCccccceeEEeeeecccccchhhhccccccc--eeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHH
Q 017085           75 VLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVA--GAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELME  152 (377)
Q Consensus        75 ~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~  152 (377)
                      .....++.. .+.+...|....... ......+..++  .+++.|....+.+.+     +|. ..++.+||||+|.+.+ 
T Consensus        99 ~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ii~~S~~~~~~~~~-----~~~-~~~~~vi~ngvd~~~~-  169 (413)
T 3oy2_A           99 LAMGKCSHR-TKIVLYVDLVSKNIR-ENLWWIFSHPKVVGVMAMSKCWISDICN-----YGC-KVPINIVSHFVDTKTI-  169 (413)
T ss_dssp             HHGGGCCSC-CEEEEEECCCSBSCC-GGGGGGGGCTTEEEEEESSTHHHHHHHH-----TTC-CSCEEECCCCCCCCCC-
T ss_pred             HHhccCCCC-CceeeeccccchhhH-HHHHHHHhccCCceEEEcCHHHHHHHHH-----cCC-CCceEEeCCCCCHHHH-
Confidence            222233322 355566665533332 33466678867  999999999888774     455 5789999999999876 


Q ss_pred             HhhhhhhhhhhHHHHHHHhCCCC--CCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcc-c
Q 017085          153 VAEDNVAKRVLREHVRESLGVRN--EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ-T  229 (377)
Q Consensus       153 ~~~~~~~~~~~~~~~r~~~~~~~--~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~-~  229 (377)
                                  ...++.+++++  +.++|+++||+.+.||++.+++|+..+.+       +.++++|+|+|++.... .
T Consensus       170 ------------~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~-------~~~~~~l~ivG~g~~~~~~  230 (413)
T 3oy2_A          170 ------------YDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFIS-------KYPDAKVRFLCNSHHESKF  230 (413)
T ss_dssp             ------------TTHHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHH-------HCTTCCEEEEEECCTTCSC
T ss_pred             ------------HHHHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHH-------hCCCcEEEEEeCCcccchh
Confidence                        12466778877  88999999999999999999999998765       44889999999986422 1


Q ss_pred             HHHHHHHHHHHhcCCCCc-------EEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCc
Q 017085          230 KFESELRNYVMQKKIQDR-------VHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGT  300 (377)
Q Consensus       230 ~~~~~l~~~~~~~~~~~~-------v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~  300 (377)
                      ...+.++++++++++.++       +.+.|++  +++.++|+.||++++||.  .|+||++++|||++|+|||+|+.+|.
T Consensus       231 ~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~~g~  308 (413)
T 3oy2_A          231 DLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSS--GEGFGLCSAEGAVLGKPLIISAVGGA  308 (413)
T ss_dssp             CHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHTTTCCEEEECCHHH
T ss_pred             hHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCC--cCCCCcHHHHHHHcCCCEEEcCCCCh
Confidence            245889999999999987       8888986  589999999999999999  99999999999999999999999999


Q ss_pred             ccceecCcc---------------ee--eecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 017085          301 TEIVVNGTT---------------GL--LHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAV  363 (377)
Q Consensus       301 ~e~~~~~~~---------------g~--~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~  363 (377)
                      .|++.++.+               |+  +++++|  +++|+++| ++++|++.+.++++++++.+.++|||+.+++++.+
T Consensus       309 ~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d--~~~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~  385 (413)
T 3oy2_A          309 DDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIID--VDDLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIID  385 (413)
T ss_dssp             HHHSCTTTSEEECCCEEEECTTTCSSCCEEEECC--HHHHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHH
T ss_pred             HHHHccCcccccccccccccccccCcceeeCCCC--HHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            999998877               99  999888  99999999 99999999999999999999889999999999999


Q ss_pred             HHHHHHhccc
Q 017085          364 VLKEVLKKSK  373 (377)
Q Consensus       364 ~~~~~~~~~~  373 (377)
                      +|++++++..
T Consensus       386 ~~~~~~~~~~  395 (413)
T 3oy2_A          386 FFNSLLRVES  395 (413)
T ss_dssp             HHHHHTC---
T ss_pred             HHHHHHhhcC
Confidence            9999986543

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*

Probab=100.00  E-value=2.1e-42  Score=313.85  Aligned_cols=327  Identities=15%  Similarity=0.116  Sum_probs=251.8

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEcc---------------chhHHHhhhcccEEEEcCc
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK---------------GQETINTALKADLIVLNTA   66 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~Div~~~~~   66 (377)
                      +|+++|+++||+|++++........            .++++....               .+..+++..+||+||+|..
T Consensus        22 ~l~~~L~~~G~~V~v~~~~~~~~~~------------~~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~Dvv~~~~~   89 (374)
T 2iw1_A           22 RIASTVAARGHHVRVYTQSWEGDCP------------KAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPADRVVGFNK   89 (374)
T ss_dssp             HHHHHHHHTTCCEEEEESEECSCCC------------TTCEEEECCCCCSSHHHHHHHHHHHHHHHHHHSCCSEEEESSC
T ss_pred             HHHHHHHhCCCeEEEEecCCCCCCC------------CCcEEEEEccCcccchhhHHHHHHHHHHHHhccCCCEEEEecC
Confidence            6899999999999999965322111            133332211               2334556789999999975


Q ss_pred             hhhhHHHHHhhcCCCccccceeEEeeeecccccch------hhhccc--cccceeeeeccchhhHhhhhhhhhhhccCCC
Q 017085           67 VAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL------DYVKHL--PLVAGAMIDSHVTAEYWKNRTRERLRIKMPD  138 (377)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~------~~~~~~--~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  138 (377)
                      .++..+..    .......+.+.+.|.........      .....+  ..+|.++++|....+.+.+    .+|++..+
T Consensus        90 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----~~~~~~~~  161 (374)
T 2iw1_A           90 MPGLDVYF----AADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQK----HYQTEPER  161 (374)
T ss_dssp             CTTCSEEE----CCSCCHHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHH----HHCCCGGG
T ss_pred             CCCceeee----ccccccceeeeecccchhhhcHHHHHHHHHHHHHhhccCCcEEEEcCHHHHHHHHH----HhCCChhh
Confidence            43321110    00111123333444432211110      011112  2689999999999888765    56777889


Q ss_pred             eEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEE
Q 017085          139 TYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHA  218 (377)
Q Consensus       139 ~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l  218 (377)
                      +.++|||+|.+.+.+...    ...+..+|++++++++.++++++|++.+.||++.+++++..+.+..      .++++|
T Consensus       162 ~~vi~ngv~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~------~~~~~l  231 (374)
T 2iw1_A          162 FQILPPGIYPDRKYSEQI----PNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESL------RHNTLL  231 (374)
T ss_dssp             EEECCCCCCGGGSGGGSC----TTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHH------HHTEEE
T ss_pred             eEEecCCcCHHhcCcccc----hhHHHHHHHHhCCCCCCeEEEEeccchhhcCHHHHHHHHHHhHhcc------CCceEE
Confidence            999999999987765432    1225678999999999999999999999999999999998764421      158999


Q ss_pred             EEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC
Q 017085          219 VIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG  298 (377)
Q Consensus       219 ~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~  298 (377)
                      +++|++.      .+.++++++++++.++|+|+|+.+++.++|+.||++++||.  .|++|++++|||++|+|||+++.+
T Consensus       232 ~i~G~g~------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~  303 (374)
T 2iw1_A          232 FVVGQDK------PRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAY--QEAAGIVLLEAITAGLPVLTTAVC  303 (374)
T ss_dssp             EEESSSC------CHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCS--CCSSCHHHHHHHHHTCCEEEETTS
T ss_pred             EEEcCCC------HHHHHHHHHHcCCCCcEEECCCcccHHHHHHhcCEEEeccc--cCCcccHHHHHHHCCCCEEEecCC
Confidence            9999973      26788888999998999999999999999999999999999  899999999999999999999999


Q ss_pred             CcccceecCcceeeec-CCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 017085          299 GTTEIVVNGTTGLLHP-VGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVL  369 (377)
Q Consensus       299 ~~~e~~~~~~~g~~~~-~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  369 (377)
                      +..+++.++.+|++++ ++|  +++++++|.++++|++.+.++++++++.+. +|+|+.+++++.++++..+
T Consensus       304 ~~~e~i~~~~~g~~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l  372 (374)
T 2iw1_A          304 GYAHYIADANCGTVIAEPFS--QEQLNEVLRKALTQSPLRMAWAENARHYAD-TQDLYSLPEKAADIITGGL  372 (374)
T ss_dssp             TTTHHHHHHTCEEEECSSCC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHH-HSCCSCHHHHHHHHHHCC-
T ss_pred             CchhhhccCCceEEeCCCCC--HHHHHHHHHHHHcChHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHhh
Confidence            9999999999999998 777  999999999999999999999999999886 4799999999999988654

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*

Probab=100.00  E-value=4.3e-41  Score=325.47  Aligned_cols=298  Identities=15%  Similarity=0.180  Sum_probs=227.5

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccc----------hh---------hhccccccceeeee
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK----------LD---------YVKHLPLVAGAMID  116 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~----------~~---------~~~~~~~~~~~~~~  116 (377)
                      .+||+||+|...++.....+...    ...|++++.|........          ..         ....+..+|.++++
T Consensus       406 ~~PDVIHsH~~~sglva~llar~----~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~  481 (816)
T 3s28_A          406 GKPDLIIGNYSDGNLVASLLAHK----LGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITS  481 (816)
T ss_dssp             SCCSEEEEEHHHHHHHHHHHHHH----HTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEES
T ss_pred             CCCeEEEeCCchHHHHHHHHHHH----cCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEEC
Confidence            37999999976544333322221    135889999976421110          00         01245789999999


Q ss_pred             ccchhhHhhhhh---hhh--------------hhccCCCeEEEEcCChhhhHHHhhhhhhh-----------hhhHHHHH
Q 017085          117 SHVTAEYWKNRT---RER--------------LRIKMPDTYVVHLGNSKELMEVAEDNVAK-----------RVLREHVR  168 (377)
Q Consensus       117 s~~~~~~~~~~~---~~~--------------~~~~~~~~~vi~ngi~~~~~~~~~~~~~~-----------~~~~~~~r  168 (377)
                      |....+.+.+..   ...              .+...+++.|||||+|.+.|.+.......           .......+
T Consensus       482 S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r  561 (816)
T 3s28_A          482 TFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENK  561 (816)
T ss_dssp             CHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBT
T ss_pred             CHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHH
Confidence            988776422110   000              11223489999999999887654321100           00011234


Q ss_pred             HHhCC--CCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCc------ccHHHHHHHHHHH
Q 017085          169 ESLGV--RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA------QTKFESELRNYVM  240 (377)
Q Consensus       169 ~~~~~--~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~------~~~~~~~l~~~~~  240 (377)
                      +.+|+  +++.++|+++||+.+.||++.+++|+..+.+.       .++++|+|+|++.+.      ...+.+.++++++
T Consensus       562 ~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~-------~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~  634 (816)
T 3s28_A          562 EHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRL-------RELANLVVVGGDRRKESKDNEEKAEMKKMYDLIE  634 (816)
T ss_dssp             TEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHH-------HHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHH
T ss_pred             HHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhh-------CCCeEEEEEeCCCcccccchhhHHHHHHHHHHHH
Confidence            55666  67889999999999999999999999987542       268999999998620      1126788999999


Q ss_pred             hcCCCCcEEEecCc------CCHHHHHH-hcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeee
Q 017085          241 QKKIQDRVHFVNKT------LTVAPYLA-AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLH  313 (377)
Q Consensus       241 ~~~~~~~v~~~g~~------~~~~~~~~-~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~  313 (377)
                      ++++.++|.|+|++      +++..+|+ ++|++++||.  .|+||++++|||+||+|||+|+.||..|++.++.+|+++
T Consensus       635 ~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~--~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv  712 (816)
T 3s28_A          635 EYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHI  712 (816)
T ss_dssp             HTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCS--CBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEE
T ss_pred             HcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCC--ccCccHHHHHHHHcCCCEEEeCCCChHHHHccCCcEEEe
Confidence            99999999999964      45888888 6899999999  999999999999999999999999999999999999999


Q ss_pred             cCCCCChhHHHHHHHHHh----hCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 017085          314 PVGKEGITPLAKNIVKLA----THVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEV  368 (377)
Q Consensus       314 ~~~~~~~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~  368 (377)
                      +++|  +++++++|.+++    +|++.+.++++++++.+.++|||+.+++++.++|+..
T Consensus       713 ~p~D--~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~  769 (816)
T 3s28_A          713 DPYH--GDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY  769 (816)
T ss_dssp             CTTS--HHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred             CCCC--HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence            9988  999999997766    8999999999999999999999999999999999865

>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*

Probab=100.00  E-value=3.9e-40  Score=309.31  Aligned_cols=241  Identities=20%  Similarity=0.207  Sum_probs=191.8

Q ss_pred             cccceeeeeccchhhHhhhhhhhh----hhccCCCeEEEEcCChhhhHHHhhh------------hhhhhhhHHHHHHHh
Q 017085          108 PLVAGAMIDSHVTAEYWKNRTRER----LRIKMPDTYVVHLGNSKELMEVAED------------NVAKRVLREHVRESL  171 (377)
Q Consensus       108 ~~~~~~~~~s~~~~~~~~~~~~~~----~~~~~~~~~vi~ngi~~~~~~~~~~------------~~~~~~~~~~~r~~~  171 (377)
                      ..+|.++++|...++.+.+.....    ......++.+|+||+|.+.|.+..+            ...+...+..+++.+
T Consensus       240 ~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~  319 (536)
T 3vue_A          240 LEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEA  319 (536)
T ss_dssp             HHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHT
T ss_pred             HhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhc
Confidence            468999999999887765432100    0123568999999999998866421            122344567788888


Q ss_pred             CCC--CCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEE
Q 017085          172 GVR--NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH  249 (377)
Q Consensus       172 ~~~--~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~  249 (377)
                      |++  ++.++|+++||+.++||++.+++|+.++.+         .+.+++|+|.|..   .....++.....+  ++++.
T Consensus       320 gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~---------~~~~l~l~G~G~~---~~~~~~~~~~~~~--~~~v~  385 (536)
T 3vue_A          320 GLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQ---------EDVQIVLLGTGKK---KFEKLLKSMEEKY--PGKVR  385 (536)
T ss_dssp             TSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTT---------SSCEEEEECCBCH---HHHHHHHHHHHHS--TTTEE
T ss_pred             CCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHh---------hCCeEEEEeccCc---hHHHHHHHHHhhc--CCceE
Confidence            886  456899999999999999999999997744         6789999998753   3455566665555  46788


Q ss_pred             EecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCccee----------eecCCC
Q 017085          250 FVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGL----------LHPVGK  317 (377)
Q Consensus       250 ~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~----------~~~~~~  317 (377)
                      +.+..  +++..+|+.||++|+||.  .|+||++++|||+||+|||+|++||++|++.++.+|+          ++++.|
T Consensus       386 ~~~~~~~~~~~~~~~~aD~~v~PS~--~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d  463 (536)
T 3vue_A          386 AVVKFNAPLAHLIMAGADVLAVPSR--FEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSD  463 (536)
T ss_dssp             EECSCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHH
T ss_pred             EEEeccHHHHHHHHHhhheeecccc--cCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCC
Confidence            88865  568889999999999999  9999999999999999999999999999999999998          556666


Q ss_pred             CChhHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 017085          318 EGITPLAKNIVKLAT--HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVL  369 (377)
Q Consensus       318 ~~~~~la~~i~~l~~--~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  369 (377)
                        +++|+++|.++++  +.+.++++.+++   +.++|||++++++|+++|+++.
T Consensus       464 --~~~la~ai~ral~~~~~~~~~~~~~~a---m~~~fSW~~~A~~y~~ly~~L~  512 (536)
T 3vue_A          464 --VKKVAATLKRAIKVVGTPAYEEMVRNC---MNQDLSWKGPAKNWENVLLGLG  512 (536)
T ss_dssp             --HHHHHHHHHHHHHHTTSHHHHHHHHHH---HHSCCSSHHHHHHHHHHHHTTC
T ss_pred             --HHHHHHHHHHHHHhcCcHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhh
Confidence              8999999998876  444567776665   4478999999999999999864

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*

Probab=100.00  E-value=6.4e-40  Score=300.76  Aligned_cols=329  Identities=18%  Similarity=0.165  Sum_probs=248.1

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhccc----CceEEEc-----cchhHHHhhhcccEEEEcCchhhhHH
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR----GVQVISA-----KGQETINTALKADLIVLNTAVAGKWL   72 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~~~~~~~~~~Div~~~~~~~~~~~   72 (377)
                      +++++|.+.||+|++++.....................    .......     ..+..+++..+||+||+|......+.
T Consensus        43 ~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~  122 (406)
T 2gek_A           43 QLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFGPATHRKVKKWIAEGDFDVLHIHEPNAPSLS  122 (406)
T ss_dssp             HHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------CCHHHHHHHHHHHHHHCCSEEEEECCCSSSHH
T ss_pred             HHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEeccccCCcccccccHHHHHHHHHHHHhcCCCEEEECCccchHHH
Confidence            58999999999999999765432100000000000000    0000011     23445567789999999987654432


Q ss_pred             HHHhhcCCCccccceeEEeeeeccccc-----chhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCCh
Q 017085           73 DAVLKEDVPRVLPNVLWWIHEMRGHYF-----KLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNS  147 (377)
Q Consensus        73 ~~~~~~~~~~~~~~~v~~~h~~~~~~~-----~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~  147 (377)
                      ..+...    ...|++++.|+......     .......++.+|.+++.|....+.+.+    .+  +..++ ++|||+|
T Consensus       123 ~~~~~~----~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----~~--~~~~~-vi~~~v~  191 (406)
T 2gek_A          123 MLALQA----AEGPIVATFHTSTTKSLTLSVFQGILRPYHEKIIGRIAVSDLARRWQME----AL--GSDAV-EIPNGVD  191 (406)
T ss_dssp             HHHHHH----EESSEEEEECCCCCSHHHHHHHHSTTHHHHTTCSEEEESSHHHHHHHHH----HH--SSCEE-ECCCCBC
T ss_pred             HHHHHh----cCCCEEEEEcCcchhhhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHH----hc--CCCcE-EecCCCC
Confidence            222221    13588999998643221     111224557899999999998888765    23  44678 9999999


Q ss_pred             hhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccc-cccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCC
Q 017085          148 KELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV-SRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMN  226 (377)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~-~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~  226 (377)
                      .+.+.+....             .+++.+.++++++|++ .+.||++.+++++..+.+       +.++++|+|+|++. 
T Consensus       192 ~~~~~~~~~~-------------~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~-------~~~~~~l~i~G~~~-  250 (406)
T 2gek_A          192 VASFADAPLL-------------DGYPREGRTVLFLGRYDEPRKGMAVLLAALPKLVA-------RFPDVEILIVGRGD-  250 (406)
T ss_dssp             HHHHHTCCCC-------------TTCSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHT-------TSTTCEEEEESCSC-
T ss_pred             hhhcCCCchh-------------hhccCCCeEEEEEeeeCccccCHHHHHHHHHHHHH-------HCCCeEEEEEcCCc-
Confidence            8876543211             1233456899999999 999999999999997654       44799999999983 


Q ss_pred             cccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccce
Q 017085          227 AQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIV  304 (377)
Q Consensus       227 ~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~  304 (377)
                          . +.+++.++++  .++|.|+|++  +++.++|+.||++|+||. +.|++|++++|||++|+|||+++.++..|++
T Consensus       251 ----~-~~l~~~~~~~--~~~v~~~g~~~~~~~~~~~~~adv~v~ps~-~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i  322 (406)
T 2gek_A          251 ----E-DELREQAGDL--AGHLRFLGQVDDATKASAMRSADVYCAPHL-GGESFGIVLVEAMAAGTAVVASDLDAFRRVL  322 (406)
T ss_dssp             ----H-HHHHHHTGGG--GGGEEECCSCCHHHHHHHHHHSSEEEECCC-SCCSSCHHHHHHHHHTCEEEECCCHHHHHHH
T ss_pred             ----H-HHHHHHHHhc--cCcEEEEecCCHHHHHHHHHHCCEEEecCC-CCCCCchHHHHHHHcCCCEEEecCCcHHHHh
Confidence                4 7788887776  6799999998  567999999999999984 2899999999999999999999999999999


Q ss_pred             ecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccc
Q 017085          305 VNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSK  373 (377)
Q Consensus       305 ~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~  373 (377)
                      .++.+|+++++.|  +++++++|.++++|++.+.++++++++.+. +|+|+.+++++.++|++++.+..
T Consensus       323 ~~~~~g~~~~~~d--~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~  388 (406)
T 2gek_A          323 ADGDAGRLVPVDD--ADGMAAALIGILEDDQLRAGYVARASERVH-RYDWSVVSAQIMRVYETVSGAGI  388 (406)
T ss_dssp             TTTTSSEECCTTC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHGG-GGBHHHHHHHHHHHHHHHCCTTC
T ss_pred             cCCCceEEeCCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHhhcc
Confidence            9989999999888  999999999999999999999999999987 89999999999999999987554

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*

Probab=100.00  E-value=2.3e-39  Score=290.24  Aligned_cols=287  Identities=16%  Similarity=0.098  Sum_probs=230.6

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEcc---chhHHHhhhcccEEEEcCchhhhHHHHHhhc
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK---GQETINTALKADLIVLNTAVAGKWLDAVLKE   78 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~   78 (377)
                      +|+++|.++||+|++++........            .++.+++..   .+..++++.+||+||+|+.....+.      
T Consensus        38 ~l~~~L~~~G~~v~v~~~~~~~~~~------------~~~~~~~~~~~~~l~~~l~~~~~Dvi~~~~~~~~~~~------   99 (342)
T 2iuy_A           38 NLMDGLLELGHEVFLLGAPGSPAGR------------PGLTVVPAGEPEEIERWLRTADVDVVHDHSGGVIGPA------   99 (342)
T ss_dssp             HHHHHHHHTTCEEEEESCTTSCCCS------------TTEEECSCCSHHHHHHHHHHCCCSEEEECSSSSSCST------
T ss_pred             HHHHHHHHcCCeEEEEecCCCCCCC------------CcceeccCCcHHHHHHHHHhcCCCEEEECCchhhHHH------
Confidence            5899999999999999976543221            233333322   3455667789999999987644332      


Q ss_pred             CCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhh
Q 017085           79 DVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNV  158 (377)
Q Consensus        79 ~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~  158 (377)
                       ......| +++.|+......         .+|.+++.|....+.+.+         ..++.+||||+|.+.+.+...  
T Consensus       100 -~~~~~~p-v~~~h~~~~~~~---------~~d~ii~~S~~~~~~~~~---------~~~~~vi~ngvd~~~~~~~~~--  157 (342)
T 2iuy_A          100 -GLPPGTA-FISSHHFTTRPV---------NPVGCTYSSRAQRAHCGG---------GDDAPVIPIPVDPARYRSAAD--  157 (342)
T ss_dssp             -TCCTTCE-EEEEECSSSBCS---------CCTTEEESCHHHHHHTTC---------CTTSCBCCCCBCGGGSCCSTT--
T ss_pred             -HhhcCCC-EEEecCCCCCcc---------cceEEEEcCHHHHHHHhc---------CCceEEEcCCCChhhcCcccc--
Confidence             1122357 999998754321         289999999998887653         468999999999887654321  


Q ss_pred             hhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHH
Q 017085          159 AKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNY  238 (377)
Q Consensus       159 ~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~  238 (377)
                                   .. ++..+++++||+.+.||++.++++++.+            +++|+|+|+|     +..+.++++
T Consensus       158 -------------~~-~~~~~i~~vG~~~~~Kg~~~li~a~~~~------------~~~l~i~G~g-----~~~~~l~~~  206 (342)
T 2iuy_A          158 -------------QV-AKEDFLLFMGRVSPHKGALEAAAFAHAC------------GRRLVLAGPA-----WEPEYFDEI  206 (342)
T ss_dssp             -------------CC-CCCSCEEEESCCCGGGTHHHHHHHHHHH------------TCCEEEESCC-----CCHHHHHHH
T ss_pred             -------------cC-CCCCEEEEEeccccccCHHHHHHHHHhc------------CcEEEEEeCc-----ccHHHHHHH
Confidence                         11 3456789999999999999999999854            5899999998     356778888


Q ss_pred             HHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCC--------CCCccchHHHHHHHcCCcEEEeCCCCcccceec--
Q 017085          239 VMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQA--------WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN--  306 (377)
Q Consensus       239 ~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~--------~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~--  306 (377)
                      +++++  ++|+|+|++  +++.++|+.||++++||..        |.|++|++++|||++|+|||+|+.++..|++.+  
T Consensus       207 ~~~~~--~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~  284 (342)
T 2iuy_A          207 TRRYG--STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVG  284 (342)
T ss_dssp             HHHHT--TTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGE
T ss_pred             HHHhC--CCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccC
Confidence            88877  799999998  4679999999999999971        269999999999999999999999999999999  


Q ss_pred             CcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcc
Q 017085          307 GTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKS  372 (377)
Q Consensus       307 ~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  372 (377)
                      +.+|+++++ |  +++++++|.++++        ++++++.+.++|+|+.+++++.++|++++++.
T Consensus       285 ~~~g~~~~~-d--~~~l~~~i~~l~~--------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~  339 (342)
T 2iuy_A          285 EVVGYGTDF-A--PDEARRTLAGLPA--------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGA  339 (342)
T ss_dssp             EECCSSSCC-C--HHHHHHHHHTSCC--------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTC
T ss_pred             CCceEEcCC-C--HHHHHHHHHHHHH--------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccC
Confidence            889999998 8  9999999999987        67788888889999999999999999998764

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*

Probab=100.00  E-value=7.2e-36  Score=272.59  Aligned_cols=318  Identities=11%  Similarity=0.084  Sum_probs=210.5

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhh----hc-ccC--ceEEEcc-chhHHHhhhcccEEEEcCchhhhHHH
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHK----MW-DRG--VQVISAK-GQETINTALKADLIVLNTAVAGKWLD   73 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~----~~-~~~--~~~~~~~-~~~~~~~~~~~Div~~~~~~~~~~~~   73 (377)
                      +|+++|.++||+|+|++......... ...+...    +. ...  ..+.... .........++|+||++....+....
T Consensus        70 ~la~~L~~~GheV~Vvt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~Dvv~a~~~~~~~~~~  148 (413)
T 2x0d_A           70 KLFEQFDNKKFKKRIILTDATPNPKD-LQSFKSFKYVMPEEDKDFALQIVPFNDRYNRTIPVAKHDIFIATAWWTAYAAQ  148 (413)
T ss_dssp             HHHTTSCTTTCEEEEEESSCCCCHHH-HGGGTTSEECCTTCCCCCSEEEEECSCCTTCCEEECTTEEEEECSHHHHHHHH
T ss_pred             HHHHHHHHcCCceEEEEecCCCChHH-HHhhhccceeeccCCccccceeeeccccccccccCCCCCEEEEehHHHHHHHH
Confidence            68999999999999999764332111 1111100    00 000  1111111 11111223579999998754443333


Q ss_pred             HHhhc---CCCccccceeEEeeeecccccchh-----hhccccccc--eeeeeccchhhHhhhhhhhhhhccCCCeEEEE
Q 017085           74 AVLKE---DVPRVLPNVLWWIHEMRGHYFKLD-----YVKHLPLVA--GAMIDSHVTAEYWKNRTRERLRIKMPDTYVVH  143 (377)
Q Consensus        74 ~~~~~---~~~~~~~~~v~~~h~~~~~~~~~~-----~~~~~~~~~--~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~  143 (377)
                      .+...   .......+.++..|+..+.++...     ....+...+  .++++|....+.+.+     .|++..++.+++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~~~~~l~~-----~g~~~~~~~~i~  223 (413)
T 2x0d_A          149 RIVSWQSDTYGIPPNKILYIIQDFEPGFYQWSSQYVLAESTYKYRGPQIAVFNSELLKQYFNN-----KGYNFTDEYFFQ  223 (413)
T ss_dssp             HHHHHHHHHHTCCCCCEEEEECSCGGGGSCSSHHHHHHHHTTSCCSCEEEEEESHHHHHHHHH-----HTCCCSEEEEEC
T ss_pred             HhhhhhhhhcccccCcEEEEEeechhhcCccChHHHHHHHHhccCCceEEEEcCHHHHHHHHH-----cCCCCCceEEeC
Confidence            22100   000011356666776654332211     112333343  478899999888764     355556799999


Q ss_pred             cCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccc-cccchhHHHHHHHHHHHHHHhhhcccCC---CeEEE
Q 017085          144 LGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV-SRGKGQDLFLHSFYESLELIKEKKLEVP---SVHAV  219 (377)
Q Consensus       144 ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~-~~~Kg~~~ll~a~~~l~~~l~~~~~~~~---~~~l~  219 (377)
                      ||+|.+.+.+..               .+ .++...++++||+ .+.||++.+++|++.+.+       +.+   +++|+
T Consensus       224 ~g~d~~~~~~~~---------------~~-~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~-------~~~~~~~~~l~  280 (413)
T 2x0d_A          224 PKINTTLKNYIN---------------DK-RQKEKIILVYGRPSVKRNAFTLIVEALKIFVQ-------KYDRSNEWKII  280 (413)
T ss_dssp             CCCCHHHHTTTT---------------SC-CCCCSEEEEEECTTCGGGCHHHHHHHHHHHHH-------HCTTGGGCEEE
T ss_pred             CCcCchhhcccc---------------cc-cCCCCEEEEEecCchhccCHHHHHHHHHHHHH-------hCCCCCceEEE
Confidence            999887553210               11 1345667788996 689999999999998755       224   48999


Q ss_pred             EEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCC
Q 017085          220 IIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA  297 (377)
Q Consensus       220 i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~  297 (377)
                      ++|++...            .++++.++|+|+|++  +++.++|+.||++++||.  .|+||++++||||||+|||+++ 
T Consensus       281 ivG~~~~~------------~~l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~--~E~~g~~~lEAmA~G~PVV~~~-  345 (413)
T 2x0d_A          281 SVGEKHKD------------IALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMI--SPHPSYPPLEMAHFGLRVITNK-  345 (413)
T ss_dssp             EEESCCCC------------EEEETTEEEEEEESCCHHHHHHHHHHCCEEECCCS--SSSCCSHHHHHHHTTCEEEEEC-
T ss_pred             EEcCCchh------------hhcCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecC--CCCCCcHHHHHHhCCCcEEEeC-
Confidence            99997431            245677899999986  789999999999999999  8999999999999999999965 


Q ss_pred             CCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Q 017085          298 GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK  370 (377)
Q Consensus       298 ~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  370 (377)
                      +|..|++.++.+|++++++|  +++|+++|.++++|++++.+   ++++.+ ++|+|+.+.++ .++|+++.+
T Consensus       346 ~g~~e~v~~~~~G~lv~~~d--~~~la~ai~~ll~~~~~~~~---~~~~~~-~~~~W~~~~~~-~~~~~~l~~  411 (413)
T 2x0d_A          346 YENKDLSNWHSNIVSLEQLN--PENIAETLVELCMSFNNRDV---DKKESS-NMMFYINEFNE-FSFIKEIEE  411 (413)
T ss_dssp             BTTBCGGGTBTTEEEESSCS--HHHHHHHHHHHHHHTC----------CCB-SCGGGCCCC----TTHHHHHT
T ss_pred             CCcchhhhcCCCEEEeCCCC--HHHHHHHHHHHHcCHHHHHH---hHHHHH-HhCCHHHHHHH-HHHHHHHHh
Confidence            56789999999999999988  99999999999998887766   555544 57999999888 777777654

>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*

Probab=100.00  E-value=2.7e-33  Score=267.71  Aligned_cols=311  Identities=12%  Similarity=0.067  Sum_probs=222.2

Q ss_pred             cHhhH--HHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEE-----ccchhHHHhhhcccEEEEcCchhh-hHHH
Q 017085            2 ELAFL--LRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS-----AKGQETINTALKADLIVLNTAVAG-KWLD   73 (377)
Q Consensus         2 ~la~~--L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~Div~~~~~~~~-~~~~   73 (377)
                      +|++.  |.+.||+|++++....... ....    .+...+ .+..     ...+..++++.+||+||.++.... ..+.
T Consensus       226 ~l~~~L~~~~~~~~v~~~~~~~~~~~-~~~~----~~~~~~-~~~~~~~~~~~~l~~~i~~~~~Div~~~~~~~~~~~~~  299 (568)
T 2vsy_A          226 ALFEALQRRQPDLQMHLFATSGDDGS-TLRT----RLAQAS-TLHDVTALGHLATAKHIRHHGIDLLFDLRGWGGGGRPE  299 (568)
T ss_dssp             HHHHHHHHHCTTEEEEEEESSCCCSC-HHHH----HHHHTS-EEEECTTCCHHHHHHHHHHTTCSEEEECSSCTTCSSCH
T ss_pred             HHHhhccCCcccEEEEEEECCCCCcc-HHHH----HHHhcC-eEEECCCCCHHHHHHHHHhCCCCEEEECCCCCCcchHH
Confidence            46777  7788999999996532111 1111    111122 2222     223456677889999998654321 1111


Q ss_pred             HHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHH
Q 017085           74 AVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEV  153 (377)
Q Consensus        74 ~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~  153 (377)
                      .... .    ..|++.+.|+.... .... ...+..+|.++++|.....         ++   +++.+|||...+....+
T Consensus       300 ~~~~-~----~~~~~~~~~~~~~~-~~~~-~~~~~~~d~~i~~s~~~~~---------~~---~~i~~ipn~~~~~~~~~  360 (568)
T 2vsy_A          300 VFAL-R----PAPVQVNWLAYPGT-SGAP-WMDYVLGDAFALPPALEPF---------YS---EHVLRLQGAFQPSDTSR  360 (568)
T ss_dssp             HHHT-C----CSSEEEEESSSSSC-CCCT-TCCEEEECTTTSCTTTGGG---------CS---SEEEECSSCSCCCCTTC
T ss_pred             HHhc-C----CCceeEeeecCCcc-cCCC-CceEEEECCCcCCcccccC---------Cc---ceeEcCCCcCCCCCCCC
Confidence            1111 1    12455555543211 1110 0111245666666664432         22   67999999544321100


Q ss_pred             hhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEe-cCCCcccHHH
Q 017085          154 AEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIG-SDMNAQTKFE  232 (377)
Q Consensus       154 ~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G-~~~~~~~~~~  232 (377)
                      ..       .+...|+++|++++.+++ ++|++.+ ||++.+++++..+.+       +.|+++|+|+| +|     +..
T Consensus       361 ~~-------~~~~~r~~~~~~~~~~v~-~~g~~~~-K~~~~li~a~~~l~~-------~~~~~~l~i~G~~g-----~~~  419 (568)
T 2vsy_A          361 VV-------AEPPSRTQCGLPEQGVVL-CCFNNSY-KLNPQSMARMLAVLR-------EVPDSVLWLLSGPG-----EAD  419 (568)
T ss_dssp             CC-------CCCCCTGGGTCCTTSCEE-EECCCGG-GCCHHHHHHHHHHHH-------HCTTCEEEEECCST-----THH
T ss_pred             CC-------CCCCCccccCCCCCCEEE-EeCCccc-cCCHHHHHHHHHHHH-------hCCCcEEEEecCCH-----HHH
Confidence            00       012357788997776555 8999999 999999999998765       34899999999 66     578


Q ss_pred             HHHHHHHHhcCCC-CcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEE-------eCCC----
Q 017085          233 SELRNYVMQKKIQ-DRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLG-------TAAG----  298 (377)
Q Consensus       233 ~~l~~~~~~~~~~-~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~-------s~~~----  298 (377)
                      +.+++.++++|+. ++|+|+|++  +++..+|+.||++|+||.  + |+|++++|||+||+|||+       |+.+    
T Consensus       420 ~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~--~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l  496 (568)
T 2vsy_A          420 ARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHP--Y-NAHTTASDALWTGCPVLTTPGETFAARVAGSLN  496 (568)
T ss_dssp             HHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSS--S-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH
T ss_pred             HHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCC--C-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH
Confidence            8999999999998 999999998  489999999999999999  7 999999999999999999       9999    


Q ss_pred             ---CcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHH--HHhcCHHHHHHHHHHHHHHHHhccc
Q 017085          299 ---GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERV--KEIFQEHHMAERIAVVLKEVLKKSK  373 (377)
Q Consensus       299 ---~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~--~~~f~~~~~~~~~~~~~~~~~~~~~  373 (377)
                         |++|++.+          |  +++++++|.++++|++.+.++++++++.+  .++|+|+.+++++.++|++++++..
T Consensus       497 ~~~g~~e~v~~----------~--~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~~  564 (568)
T 2vsy_A          497 HHLGLDEMNVA----------D--DAAFVAKAVALASDPAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARRHG  564 (568)
T ss_dssp             HHHTCGGGBCS----------S--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHCCChhhhcC----------C--HHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence               99988854          4  99999999999999999999999999988  6789999999999999999987654

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*

Probab=100.00  E-value=2.9e-32  Score=246.22  Aligned_cols=299  Identities=14%  Similarity=0.052  Sum_probs=216.2

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEc------------------------cchhHHHhhhc
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA------------------------KGQETINTALK   57 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~   57 (377)
                      +|+++|+++||+|++++.......        ..+...|+++...                        .....++++.+
T Consensus        25 ~la~~L~~~G~~V~v~~~~~~~~~--------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~   96 (364)
T 1f0k_A           25 AVAHHLMAQGWQVRWLGTADRMEA--------DLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYK   96 (364)
T ss_dssp             HHHHHHHTTTCEEEEEECTTSTHH--------HHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHcCCEEEEEecCCcchh--------hhccccCCceEEecCCccCcCccHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            689999999999999997653211        1111224333221                        11234456679


Q ss_pred             ccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCC
Q 017085           58 ADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMP  137 (377)
Q Consensus        58 ~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  137 (377)
                      ||+||+++.........+...    ...|++.+.|+.....   ......+.+|.+++.+...             ++  
T Consensus        97 pDvv~~~~~~~~~~~~~~~~~----~~~p~v~~~~~~~~~~---~~~~~~~~~d~v~~~~~~~-------------~~--  154 (364)
T 1f0k_A           97 PDVVLGMGGYVSGPGGLAAWS----LGIPVVLHEQNGIAGL---TNKWLAKIATKVMQAFPGA-------------FP--  154 (364)
T ss_dssp             CSEEEECSSTTHHHHHHHHHH----TTCCEEEEECSSSCCH---HHHHHTTTCSEEEESSTTS-------------SS--
T ss_pred             CCEEEEeCCcCchHHHHHHHH----cCCCEEEEecCCCCcH---HHHHHHHhCCEEEecChhh-------------cC--
Confidence            999999986533322222211    1247778888653221   2223346778888766532             12  


Q ss_pred             CeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCe-EEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCe
Q 017085          138 DTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDL-LFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSV  216 (377)
Q Consensus       138 ~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~  216 (377)
                      ++.+++||++...+....           .++.++++++.+ ++++.|++.+.||.+.+++++..+.          .++
T Consensus       155 ~~~~i~n~v~~~~~~~~~-----------~~~~~~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l~----------~~~  213 (364)
T 1f0k_A          155 NAEVVGNPVRTDVLALPL-----------PQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLG----------DSV  213 (364)
T ss_dssp             SCEECCCCCCHHHHTSCC-----------HHHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHG----------GGE
T ss_pred             CceEeCCccchhhcccch-----------hhhhcccCCCCcEEEEEcCchHhHHHHHHHHHHHHHhc----------CCc
Confidence            578999999987653211           135567766665 5556679999999999999998662          157


Q ss_pred             E-EEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe
Q 017085          217 H-AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT  295 (377)
Q Consensus       217 ~-l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s  295 (377)
                      + ++++|++.      .+++++.+++++++ +|+|+|+++++.++|+.||++++||.      |++++|||++|+|||++
T Consensus       214 ~~l~i~G~~~------~~~l~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~v~~sg------~~~~~EAma~G~Pvi~~  280 (364)
T 1f0k_A          214 TIWHQSGKGS------QQSVEQAYAEAGQP-QHKVTEFIDDMAAAYAWADVVVCRSG------ALTVSEIAAAGLPALFV  280 (364)
T ss_dssp             EEEEECCTTC------HHHHHHHHHHTTCT-TSEEESCCSCHHHHHHHCSEEEECCC------HHHHHHHHHHTCCEEEC
T ss_pred             EEEEEcCCch------HHHHHHHHhhcCCC-ceEEecchhhHHHHHHhCCEEEECCc------hHHHHHHHHhCCCEEEe
Confidence            8 56678873      36788888888874 79999999999999999999999982      99999999999999999


Q ss_pred             CCCCcc--------cceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 017085          296 AAGGTT--------EIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE  367 (377)
Q Consensus       296 ~~~~~~--------e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~  367 (377)
                      +.+|.+        +++.++ .|++++++|.++++++++|.++  |++.+.++++++++.+ ++|+|+.++++++++|++
T Consensus       281 ~~~g~~~~q~~~~~~~~~~g-~g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~y~~  356 (364)
T 1f0k_A          281 PFQHKDRQQYWNALPLEKAG-AAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAAS-IPDATERVANEVSRVARA  356 (364)
T ss_dssp             CCCCTTCHHHHHHHHHHHTT-SEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTC-CTTHHHHHHHHHHHHHTT
T ss_pred             eCCCCchhHHHHHHHHHhCC-cEEEeccccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhh-ccCHHHHHHHHHHHHHHH
Confidence            998764        455444 6999987654489999999998  9999999999999876 579999999999999986


Q ss_pred             H
Q 017085          368 V  368 (377)
Q Consensus       368 ~  368 (377)
                      .
T Consensus       357 ~  357 (364)
T 1f0k_A          357 L  357 (364)
T ss_dssp             C
T ss_pred             H
Confidence            4

>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*

Probab=100.00  E-value=4.6e-31  Score=243.73  Aligned_cols=294  Identities=11%  Similarity=0.053  Sum_probs=202.6

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc--cc-h----hhhccccccceeeeeccchhhHhhhhh
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY--FK-L----DYVKHLPLVAGAMIDSHVTAEYWKNRT  128 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~--~~-~----~~~~~~~~~~~~~~~s~~~~~~~~~~~  128 (377)
                      ..+|+||+|+........ .++...+.  .|++++.|..++..  +. .    .....+-.+|.+...+......+....
T Consensus       122 ~~~DiV~vHdyhl~~l~~-~lr~~~~~--~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~  198 (482)
T 1uqt_A          122 QDDDIIWIHDYHLLPFAH-ELRKRGVN--NRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCL  198 (482)
T ss_dssp             CTTCEEEEESGGGTTHHH-HHHHTTCC--SCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHH
T ss_pred             CCCCEEEEECchHHHHHH-HHHHhCCC--CcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHH
Confidence            357999999865433333 33322222  47899999754321  10 0    001111233444444333333222111


Q ss_pred             -------------hhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHH
Q 017085          129 -------------RERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLF  195 (377)
Q Consensus       129 -------------~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~l  195 (377)
                                   .+.+| ...++.++|||||.+.|.+......... ...+|++++   ++++|+++||+++.||++.+
T Consensus       199 ~~~l~~~~~~~~~~~~~g-~~~~v~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~---~~~vil~VgRl~~~Kgi~~l  273 (482)
T 1uqt_A          199 SNLTRVTTRSAKSHTAWG-KAFRTEVYPIGIEPKEIAKQAAGPLPPK-LAQLKAELK---NVQNIFSVERLDYSKGLPER  273 (482)
T ss_dssp             HHHSCEEEETTTEEEETT-EEEEEEECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTT---TCEEEEEECCBCGGGCHHHH
T ss_pred             HHHhCCccccCCeEEECC-eEEEEEEEeccCCHHHHHHHhcCcchHH-HHHHHHHhC---CCEEEEEEeCCcccCCHHHH
Confidence                         11122 2357899999999998865432111111 456788886   56899999999999999999


Q ss_pred             HHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccH----HHHHHHHHHHhcC----CC--CcEEE-ecCc--CCHHHHHH
Q 017085          196 LHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK----FESELRNYVMQKK----IQ--DRVHF-VNKT--LTVAPYLA  262 (377)
Q Consensus       196 l~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~----~~~~l~~~~~~~~----~~--~~v~~-~g~~--~~~~~~~~  262 (377)
                      ++|++.+.+...+.   ..+++|+++|.+...+.+    +.+++++++.+++    ..  ..|++ .|..  +++..+|+
T Consensus       274 l~A~~~ll~~~p~~---~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~  350 (482)
T 1uqt_A          274 FLAYEALLEKYPQH---HGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFR  350 (482)
T ss_dssp             HHHHHHHHHHCGGG---TTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHhCccc---cCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHH
Confidence            99999886633221   135889999974322222    3455555555432    21  13665 4554  78999999


Q ss_pred             hcCEEEecCCCCCCccchHHHHHHHcCC-----cEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhh-CHHH
Q 017085          263 AIDVLVQNSQAWGECFGRITIEAMAFQL-----PVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVER  336 (377)
Q Consensus       263 ~adv~l~ps~~~~e~~~~~~~Ea~a~g~-----PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~-~~~~  336 (377)
                      .||++|+||.  .||||++++||||||+     |+|+|+.+|..+.+.   +|+++++.|  ++++|++|.++++ ++++
T Consensus       351 ~ADv~v~pS~--~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~---~g~lv~p~d--~~~lA~ai~~lL~~~~~~  423 (482)
T 1uqt_A          351 YSDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYD--RDEVAAALDRALTMSLAE  423 (482)
T ss_dssp             HCSEEEECCS--SBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTC--HHHHHHHHHHHHTCCHHH
T ss_pred             HccEEEECCC--cccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhC---CeEEECCCC--HHHHHHHHHHHHcCCHHH
Confidence            9999999999  9999999999999997     999999888777772   789999998  9999999999998 5778


Q ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 017085          337 RLTMGKRGYERVKEIFQEHHMAERIAVVLKEV  368 (377)
Q Consensus       337 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~  368 (377)
                      +.++++++++.+.+ |||+.+++++.+.|+++
T Consensus       424 r~~~~~~~~~~v~~-~s~~~~a~~~l~~l~~~  454 (482)
T 1uqt_A          424 RISRHAEMLDVIVK-NDINHWQECFISDLKQI  454 (482)
T ss_dssp             HHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHh-CCHHHHHHHHHHHHHhc
Confidence            89999999998855 99999999999999876

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*

Probab=100.00  E-value=2.6e-32  Score=248.30  Aligned_cols=290  Identities=11%  Similarity=0.064  Sum_probs=204.2

Q ss_pred             hhHHHhhhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc----cch-hhhcc-ccccceeeeeccchhh
Q 017085           49 QETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY----FKL-DYVKH-LPLVAGAMIDSHVTAE  122 (377)
Q Consensus        49 ~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~----~~~-~~~~~-~~~~~~~~~~s~~~~~  122 (377)
                      +..++++.+||+||+|+.....+...+....   ...|++.+.|+.....    +.. ..... .+.+|.+++.|....+
T Consensus        78 l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~---~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~  154 (384)
T 1vgv_A           78 LKPILAEFKPDVVLVHGDTTTTLATSLAAFY---QRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQ  154 (384)
T ss_dssp             HHHHHHHHCCSEEEEETTCHHHHHHHHHHHT---TTCCEEEESCCCCCSCTTSSTTHHHHHHHHHTTCSEEEESSHHHHH
T ss_pred             HHHHHHHhCCCEEEEeCCchHHHHHHHHHHH---HCCCEEEEecccccccccCCCchHhhHHHHHhhccEEEcCcHHHHH
Confidence            3455677899999999752222222222111   1247788888753211    111 11222 3558999999998887


Q ss_pred             HhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhC-CCC-CCeEEEEecccccc-chhHHHHHHH
Q 017085          123 YWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLG-VRN-EDLLFAIINSVSRG-KGQDLFLHSF  199 (377)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~-~~~~i~~~G~~~~~-Kg~~~ll~a~  199 (377)
                      .+.     .+|++.+++.+++||+.................+..+++.+| +++ ++++++++||+.+. ||++.+++|+
T Consensus       155 ~l~-----~~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~kg~~~li~a~  229 (384)
T 1vgv_A          155 NLL-----RENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHAL  229 (384)
T ss_dssp             HHH-----HTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCHHHHHHHHHH
T ss_pred             HHH-----HcCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCccccchHHHHHHHHH
Confidence            765     457777889999999533222211100000001235678888 754 45678899999876 9999999999


Q ss_pred             HHHHHHHhhhcccCCCeEEEEE-ecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCC
Q 017085          200 YESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGE  276 (377)
Q Consensus       200 ~~l~~~l~~~~~~~~~~~l~i~-G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e  276 (377)
                      ..+.+       +.++++++++ |.+.    ...+.+++.+..   .++|+|+|+.  +++.++|+.||++|+||     
T Consensus       230 ~~l~~-------~~~~~~l~i~~g~~~----~~~~~l~~~~~~---~~~v~~~g~~~~~~~~~~~~~ad~~v~~S-----  290 (384)
T 1vgv_A          230 ADIAT-------THQDIQIVYPVHLNP----NVREPVNRILGH---VKNVILIDPQEYLPFVWLMNHAWLILTDS-----  290 (384)
T ss_dssp             HHHHH-------HCTTEEEEEECCBCH----HHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHHCSEEEESS-----
T ss_pred             HHHHh-------hCCCeEEEEEcCCCH----HHHHHHHHHhhc---CCCEEEeCCCCHHHHHHHHHhCcEEEECC-----
Confidence            97755       3478999886 4331    245566655432   3589997654  78999999999999998     


Q ss_pred             ccchHHHHHHHcCCcEEEeCC-CCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHH
Q 017085          277 CFGRITIEAMAFQLPVLGTAA-GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEH  355 (377)
Q Consensus       277 ~~~~~~~Ea~a~g~PvI~s~~-~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~  355 (377)
                        |.+++|||++|+|||+++. ++..+++.++ +|+++++ |  +++++++|.++++|++.+.+|+++++++. +.|+|+
T Consensus       291 --g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv~~-d--~~~la~~i~~ll~d~~~~~~~~~~~~~~~-~~~~~~  363 (384)
T 1vgv_A          291 --GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-D--KQRIVEEVTRLLKDENEYQAMSRAHNPYG-DGQACS  363 (384)
T ss_dssp             --STGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEECS-S--HHHHHHHHHHHHHCHHHHHHHHSSCCTTC-CSCHHH
T ss_pred             --cchHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEeCC-C--HHHHHHHHHHHHhChHHHhhhhhccCCCc-CCCHHH
Confidence              3348999999999999986 8999999877 9999977 6  99999999999999999999999888764 679999


Q ss_pred             HHHHHHHHHHHHHHhcc
Q 017085          356 HMAERIAVVLKEVLKKS  372 (377)
Q Consensus       356 ~~~~~~~~~~~~~~~~~  372 (377)
                      ++++.+.++|+++.+..
T Consensus       364 ~i~~~~~~~~~~~~~~~  380 (384)
T 1vgv_A          364 RILEALKNNRISLGSHH  380 (384)
T ss_dssp             HHHHHHHHTCCCC----
T ss_pred             HHHHHHHHHHHhhcccc
Confidence            99999999988876544

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*

Probab=100.00  E-value=8.2e-32  Score=249.61  Aligned_cols=306  Identities=14%  Similarity=0.111  Sum_probs=209.8

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeec--------ccc--cc------h--------------hhhc
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMR--------GHY--FK------L--------------DYVK  105 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~--------~~~--~~------~--------------~~~~  105 (377)
                      .+|||+|+|.-.++..+..+... .+  ..+.|+|+|...        +..  +.      .              ..+.
T Consensus       180 ~~pdIiH~HDW~tg~~~~~Lk~~-~~--~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKa  256 (725)
T 3nb0_A          180 QHAIVAHFHEWLAGVALPLCRKR-RI--DVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERA  256 (725)
T ss_dssp             SEEEEEEEESGGGCTHHHHHHHT-TC--SCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHH
T ss_pred             CCCcEEEeCchhhhHHHHHHHHh-CC--CCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHH
Confidence            56999999987666544443322 22  358999999873        211  00      0              0112


Q ss_pred             cccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhh-hhhhhhhHHHHHHH--------hCCC-C
Q 017085          106 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAED-NVAKRVLREHVRES--------LGVR-N  175 (377)
Q Consensus       106 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~-~~~~~~~~~~~r~~--------~~~~-~  175 (377)
                      .+..+|.++++|..+++....    -++.+.+.+  ||||+|.+.|.+... .......|..+.+.        ++++ +
T Consensus       257 ga~~AD~ITTVS~~yA~Ei~~----Ll~r~~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~d  330 (725)
T 3nb0_A          257 AAHSADVFTTVSQITAFEAEH----LLKRKPDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLD  330 (725)
T ss_dssp             HHHHSSEEEESSHHHHHHHHH----HTSSCCSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGG
T ss_pred             HHHhCCEEEECCHHHHHHHHH----HhcCCCCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCC
Confidence            234889999999999987775    334454433  999999988765311 11111223333222        2555 3


Q ss_pred             CCeEEEEecccc-ccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCccc-------------------------
Q 017085          176 EDLLFAIINSVS-RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQT-------------------------  229 (377)
Q Consensus       176 ~~~~i~~~G~~~-~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~-------------------------  229 (377)
                      +.++++.+||+. .+||+|.+++|+.+|...|+..+.+..-+.|+|+..+...-.                         
T Consensus       331 k~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~  410 (725)
T 3nb0_A          331 NTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIG  410 (725)
T ss_dssp             GEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHh
Confidence            446666689998 789999999999999888876543334577777766422100                         


Q ss_pred             -----------------------------------------------------------HHHHHHHHHHHhcCCCCc---
Q 017085          230 -----------------------------------------------------------KFESELRNYVMQKKIQDR---  247 (377)
Q Consensus       230 -----------------------------------------------------------~~~~~l~~~~~~~~~~~~---  247 (377)
                                                                                 ...+.+...++++++.++   
T Consensus       411 ~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~d  490 (725)
T 3nb0_A          411 KRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSD  490 (725)
T ss_dssp             HHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTC
T ss_pred             HHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCC
Confidence                                                                       011223334455665544   


Q ss_pred             ---EEEecC-c--------CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecC-------c
Q 017085          248 ---VHFVNK-T--------LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG-------T  308 (377)
Q Consensus       248 ---v~~~g~-~--------~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~-------~  308 (377)
                         |+|++. .        .++.++|+.||++|+||.  .|+||++++||||||+|||+|+.+|+.+.+.++       .
T Consensus       491 rVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~--~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~  568 (725)
T 3nb0_A          491 RVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSY--YEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKD  568 (725)
T ss_dssp             SEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCS--SBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHH
T ss_pred             ceeEEEeccccCCCCccchhHHHHHHhhceEEEeccc--cCCCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCCC
Confidence               666652 2        368999999999999999  999999999999999999999999999998775       3


Q ss_pred             ceeeecCC-CCChhHHHHHHHHHhh-----CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccc
Q 017085          309 TGLLHPVG-KEGITPLAKNIVKLAT-----HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSK  373 (377)
Q Consensus       309 ~g~~~~~~-~~~~~~la~~i~~l~~-----~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~  373 (377)
                      +|+++.+. +.++++++++|.+++.     ++..+..++.++++.+ ++|+|++++++|+++|++++.+..
T Consensus       569 tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A-~~FSWe~iA~~Yl~~Ye~aL~~~~  638 (725)
T 3nb0_A          569 YGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALS-DLLDWKRMGLEYVKARQLALRRGY  638 (725)
T ss_dssp             TTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGG-GGGBHHHHHHHHHHHHHHHHHHHC
T ss_pred             ceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHhhcc
Confidence            79888532 1126666666655553     7888889999888755 679999999999999999986543

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*

Probab=99.97  E-value=9.2e-32  Score=245.65  Aligned_cols=238  Identities=15%  Similarity=0.161  Sum_probs=182.4

Q ss_pred             cccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecc-c------ccchhhhccccccceeeeeccchhhHhhhhhh
Q 017085           57 KADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRG-H------YFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTR  129 (377)
Q Consensus        57 ~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~-~------~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  129 (377)
                      ++|+||.+....+.+...+...     ..|++.+.|+... .      .........++.+|.++++|....+.+.+   
T Consensus       124 ~~DvIh~~~~~~~~~~~~~~~~-----~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~---  195 (406)
T 2hy7_A          124 ESDVIVFESGIAVAFIELAKRV-----NPAAKLVYRASDGLSTINVASYIEREFDRVAPTLDVIALVSPAMAAEVVS---  195 (406)
T ss_dssp             HCSEEEEESSGGGGGHHHHHHH-----CTTSEEEEEESSCHHHHTCCHHHHHHHHHHGGGCSEEEESCGGGGGGCSC---
T ss_pred             CCCEEEECCchHHHHHHHHHHh-----CCCEEEEEeccchhhcccccHHHHHHHHHHHHhCCEEEEcCHHHHHHHHh---
Confidence            7999996655444322222222     2477888886532 1      11223345568899999999998887653   


Q ss_pred             hhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhh
Q 017085          130 ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEK  209 (377)
Q Consensus       130 ~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~  209 (377)
                        .+    ++.+||||+|.+.|.+....              . .++.++++|+||+.+.||+   +.++   .+     
T Consensus       196 --~~----~i~vipngvd~~~f~~~~~~--------------~-~~~~~~i~~vGrl~~~Kg~---~~~l---~~-----  243 (406)
T 2hy7_A          196 --RD----NVFHVGHGVDHNLDQLGDPS--------------P-YAEGIHAVAVGSMLFDPEF---FVVA---SK-----  243 (406)
T ss_dssp             --ST----TEEECCCCBCTTHHHHHCSC--------------S-CCSSEEEEEECCTTBCHHH---HHHH---HH-----
T ss_pred             --cC----CEEEEcCCcChHhcCccccc--------------c-cCCCcEEEEEeccccccCH---HHHH---HH-----
Confidence              22    79999999999887643211              0 1233889999999999998   3332   22     


Q ss_pred             cccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHH-
Q 017085          210 KLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAM-  286 (377)
Q Consensus       210 ~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~-  286 (377)
                        ..++++|+|+|+|+             ++++++.++|+|+|++  +++.++|+.||++++||.  .|++|++++||| 
T Consensus       244 --~~~~~~l~ivG~g~-------------~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~--~E~~~~~~lEAm~  306 (406)
T 2hy7_A          244 --AFPQVTFHVIGSGM-------------GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYA--SEQVPVYLADSSM  306 (406)
T ss_dssp             --HCTTEEEEEESCSS-------------CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBS--CSCCCTTHHHHCH
T ss_pred             --hCCCeEEEEEeCch-------------HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCC--cccCchHHHHHHH
Confidence              23899999999872             4567888999999997  689999999999999999  999999999999 


Q ss_pred             ------HcCCcEEEeCCCCcccceecCcceee-ecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHH
Q 017085          287 ------AFQLPVLGTAAGGTTEIVVNGTTGLL-HPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAE  359 (377)
Q Consensus       287 ------a~g~PvI~s~~~~~~e~~~~~~~g~~-~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~  359 (377)
                            |||+|||+|+.      +.++.+|++ ++++|  +++|+++|.++++|++         + ...++|+|+.+++
T Consensus       307 Kl~eYla~G~PVIas~~------v~~~~~G~l~v~~~d--~~~la~ai~~ll~~~~---------~-~~~~~~sw~~~a~  368 (406)
T 2hy7_A          307 KLLQYDFFGLPAVCPNA------VVGPYKSRFGYTPGN--ADSVIAAITQALEAPR---------V-RYRQCLNWSDTTD  368 (406)
T ss_dssp             HHHHHHHHTCCEEEEGG------GTCSCSSEEEECTTC--HHHHHHHHHHHHHCCC---------C-CCSCCCBHHHHHH
T ss_pred             HHHHHhhCCCcEEEehh------cccCcceEEEeCCCC--HHHHHHHHHHHHhCcc---------h-hhhhcCCHHHHHH
Confidence                  99999999987      556789999 99988  9999999999999876         1 2346799999999


Q ss_pred             HHHHH--HHHHH
Q 017085          360 RIAVV--LKEVL  369 (377)
Q Consensus       360 ~~~~~--~~~~~  369 (377)
                      ++.++  |+++.
T Consensus       369 ~~~~~~~y~~~~  380 (406)
T 2hy7_A          369 RVLDPRAYPETR  380 (406)
T ss_dssp             HHHCGGGSGGGB
T ss_pred             HHHHhhcccccC
Confidence            99999  87654

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8

Probab=99.97  E-value=3.7e-31  Score=218.37  Aligned_cols=190  Identities=21%  Similarity=0.280  Sum_probs=162.4

Q ss_pred             EEcCChhhhHH--HhhhhhhhhhhHHHHHHHhCCCCCCeEEEEecccc-ccchhHHHHHHHHHHH--HHHhhhcccCCCe
Q 017085          142 VHLGNSKELME--VAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS-RGKGQDLFLHSFYESL--ELIKEKKLEVPSV  216 (377)
Q Consensus       142 i~ngi~~~~~~--~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~-~~Kg~~~ll~a~~~l~--~~l~~~~~~~~~~  216 (377)
                      ||||+|.+.|.  +...  .....+..+|++++++++ ++|+++|++. +.||++.+++++..+.  +       +.+++
T Consensus         2 ipngvd~~~f~~~~~~~--~~~~~~~~~r~~~~~~~~-~~i~~~G~~~~~~K~~~~li~a~~~l~~~~-------~~~~~   71 (200)
T 2bfw_A            2 SHNGIDCSFWNESYLTG--SRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKK-------EFQEM   71 (200)
T ss_dssp             ---CCCTTTSSGGGSCS--CHHHHHHHHHHHTTCCSC-EEEEEESCBCSSSSCHHHHHHHHHHHTTSG-------GGGGE
T ss_pred             CCCccChhhcccccccc--chhhHHHHHHHHcCCCCC-CEEEEeeccccccCCHHHHHHHHHHHHhhc-------cCCCe
Confidence            78999999886  4321  011225678999999754 5899999999 9999999999999764  3       33789


Q ss_pred             EEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEE-ecCcC--CHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEE
Q 017085          217 HAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHF-VNKTL--TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL  293 (377)
Q Consensus       217 ~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~-~g~~~--~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI  293 (377)
                      +|+|+|.+.+   .+.+.+++.+++++   +|+| +|+++  ++.++|+.||++++||.  .|++|++++|||++|+|||
T Consensus        72 ~l~i~G~~~~---~~~~~l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~Ea~a~G~PvI  143 (200)
T 2bfw_A           72 RFIIIGKGDP---ELEGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPI  143 (200)
T ss_dssp             EEEEECCBCH---HHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHHTTCEEE
T ss_pred             EEEEECCCCh---HHHHHHHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCC--CCCccHHHHHHHHCCCCEE
Confidence            9999999731   26788899998886   8999 99984  89999999999999999  8999999999999999999


Q ss_pred             EeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcC
Q 017085          294 GTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQ  353 (377)
Q Consensus       294 ~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~f~  353 (377)
                      +++.++..+++ ++.+|++++++|  +++++++|.++++ |++.+.++++++++.+.+ ||
T Consensus       144 ~~~~~~~~e~~-~~~~g~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~-fs  200 (200)
T 2bfw_A          144 ASAVGGLRDII-TNETGILVKAGD--PGELANAILKALELSRSDLSKFRENCKKRAMS-FS  200 (200)
T ss_dssp             EESCHHHHHHC-CTTTCEEECTTC--HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-TC
T ss_pred             EeCCCChHHHc-CCCceEEecCCC--HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-cC
Confidence            99999999999 889999999888  9999999999999 999999999999999877 75

>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A

Probab=99.97  E-value=2.3e-31  Score=241.33  Aligned_cols=277  Identities=13%  Similarity=0.081  Sum_probs=195.2

Q ss_pred             hhHHHhhhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc----cc-hhhhccc-cccceeeeeccchhh
Q 017085           49 QETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY----FK-LDYVKHL-PLVAGAMIDSHVTAE  122 (377)
Q Consensus        49 ~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~----~~-~~~~~~~-~~~~~~~~~s~~~~~  122 (377)
                      +..++++.+||+||+|+.....+........   ...|++.+.|+.....    +. ......+ +.+|.+++.|....+
T Consensus        87 l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~---~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~  163 (375)
T 3beo_A           87 LDKVMKEAKPDIVLVHGDTTTTFIASLAAFY---NQIPVGHVEAGLRTWDKYSPYPEEMNRQLTGVMADLHFSPTAKSAT  163 (375)
T ss_dssp             HHHHHHHHCCSEEEEETTSHHHHHHHHHHHH---TTCCEEEESCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred             HHHHHHHhCCCEEEEeCCchHHHHHHHHHHH---HCCCEEEEecccccccccCCChhHhhhhHHhhhhheeeCCCHHHHH
Confidence            3455677899999998763222221111111   1246666666542111    11 1112222 348999999998888


Q ss_pred             HhhhhhhhhhhccCCCeEEEEcC-ChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEecccccc-chhHHHHHHHH
Q 017085          123 YWKNRTRERLRIKMPDTYVVHLG-NSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRG-KGQDLFLHSFY  200 (377)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~vi~ng-i~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~-Kg~~~ll~a~~  200 (377)
                      .+.     .+|++.+++.+++|| +|...+.....      .+..+++++  ++++++++++||+.+. ||++.+++|+.
T Consensus       164 ~~~-----~~g~~~~~i~vi~n~~~d~~~~~~~~~------~~~~~~~~~--~~~~~vl~~~gr~~~~~K~~~~li~a~~  230 (375)
T 3beo_A          164 NLQ-----KENKDESRIFITGNTAIDALKTTVKET------YSHPVLEKL--GNNRLVLMTAHRRENLGEPMRNMFRAIK  230 (375)
T ss_dssp             HHH-----HTTCCGGGEEECCCHHHHHHHHHCCSS------CCCHHHHTT--TTSEEEEEECCCGGGTTHHHHHHHHHHH
T ss_pred             HHH-----HcCCCcccEEEECChhHhhhhhhhhhh------hhHHHHHhc--cCCCeEEEEecccccchhHHHHHHHHHH
Confidence            775     457777889999999 77665432210      012344444  3556778899999875 99999999999


Q ss_pred             HHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCcc
Q 017085          201 ESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECF  278 (377)
Q Consensus       201 ~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~  278 (377)
                      .+.+       +.+++++++ |.++.  ..+.+.+++++   +..++|+|+|+.  .++..+|+.||++++||       
T Consensus       231 ~l~~-------~~~~~~~i~-~~g~~--~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s-------  290 (375)
T 3beo_A          231 RLVD-------KHEDVQVVY-PVHMN--PVVRETANDIL---GDYGRIHLIEPLDVIDFHNVAARSYLMLTDS-------  290 (375)
T ss_dssp             HHHH-------HCTTEEEEE-ECCSC--HHHHHHHHHHH---TTCTTEEEECCCCHHHHHHHHHTCSEEEECC-------
T ss_pred             HHHh-------hCCCeEEEE-eCCCC--HHHHHHHHHHh---hccCCEEEeCCCCHHHHHHHHHhCcEEEECC-------
Confidence            7754       347888654 55531  12334444432   333689998765  58999999999999987       


Q ss_pred             chHHHHHHHcCCcEEEeC-CCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHH
Q 017085          279 GRITIEAMAFQLPVLGTA-AGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHM  357 (377)
Q Consensus       279 ~~~~~Ea~a~g~PvI~s~-~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~  357 (377)
                      |.+++|||++|+|||+++ .++.++++.++ +|+++++ |  +++++++|.++++|++.+.+|+++++++. +.|+|+++
T Consensus       291 g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v~~-d--~~~la~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~i  365 (375)
T 3beo_A          291 GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLAGT-D--EETIFSLADELLSDKEAHDKMSKASNPYG-DGRASERI  365 (375)
T ss_dssp             HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEECCS-C--HHHHHHHHHHHHHCHHHHHHHCCCCCTTC-CSCHHHHH
T ss_pred             CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEcCC-C--HHHHHHHHHHHHhChHhHhhhhhcCCCCC-CCcHHHHH
Confidence            566999999999999996 48999999877 9999975 6  99999999999999999999999888765 67999999


Q ss_pred             HHHHHHHHH
Q 017085          358 AERIAVVLK  366 (377)
Q Consensus       358 ~~~~~~~~~  366 (377)
                      ++++.++++
T Consensus       366 ~~~~~~~~~  374 (375)
T 3beo_A          366 VEAILKHFN  374 (375)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHhh
Confidence            999988764

>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*

Probab=99.96  E-value=1.8e-28  Score=223.68  Aligned_cols=287  Identities=12%  Similarity=0.052  Sum_probs=212.1

Q ss_pred             cccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc--c-------chhhhccccccceeeeeccchhhHhhhh
Q 017085           57 KADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY--F-------KLDYVKHLPLVAGAMIDSHVTAEYWKNR  127 (377)
Q Consensus        57 ~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~--~-------~~~~~~~~~~~~~~~~~s~~~~~~~~~~  127 (377)
                      .-|+|++|+........ .++...+.  .++.+..|-.++..  |       .......+-.+|.+...+...+..|.+.
T Consensus       149 ~~D~VwVhDYhL~llp~-~lR~~~~~--~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~  225 (496)
T 3t5t_A          149 ADPVYLVHDYQLVGVPA-LLREQRPD--APILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLES  225 (496)
T ss_dssp             SSCEEEEESGGGTTHHH-HHHHHCTT--SCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHH
T ss_pred             CCCEEEEeCccHhHHHH-HHHhhCCC--CeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHH
Confidence            46899999876554333 33333343  37888888654422  1       1222344568899999998888777665


Q ss_pred             hhhhh-hccC-------------CCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhH
Q 017085          128 TRERL-RIKM-------------PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQD  193 (377)
Q Consensus       128 ~~~~~-~~~~-------------~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~  193 (377)
                      ..+.+ |.+.             .++.++|+|||.+.|.+...     ..+..+|++++   ++.+|+++||+++.||++
T Consensus       226 ~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~-----~~~~~lr~~~~---~~~lIl~VgRLd~~KGi~  297 (496)
T 3t5t_A          226 VADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNP-----QLPEGIEEWAD---GHRLVVHSGRTDPIKNAE  297 (496)
T ss_dssp             HHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----C-----CCCTTHHHHHT---TSEEEEEEEESSGGGCHH
T ss_pred             HHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhH-----HHHHHHHHHhC---CceEEEEcccCccccCHH
Confidence            55444 4221             26789999999998875432     11256777776   578999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhcccCC---CeEEEEEecCCCcccH----HHHHHHHHHHhc----CCCCcEEEecCc--CCHHHH
Q 017085          194 LFLHSFYESLELIKEKKLEVP---SVHAVIIGSDMNAQTK----FESELRNYVMQK----KIQDRVHFVNKT--LTVAPY  260 (377)
Q Consensus       194 ~ll~a~~~l~~~l~~~~~~~~---~~~l~i~G~~~~~~~~----~~~~l~~~~~~~----~~~~~v~~~g~~--~~~~~~  260 (377)
                      .+++|+ ++++.       +|   ++.|+++|....++.+    +.+++++++.++    +.. .|+|+|..  +++..+
T Consensus       298 ~lL~Af-~ll~~-------~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~-~V~f~g~v~~~el~al  368 (496)
T 3t5t_A          298 RAVRAF-VLAAR-------GGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD-TVRIDNDNDVNHTIAC  368 (496)
T ss_dssp             HHHHHH-HHHHH-------TSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT-SEEEEECCCHHHHHHH
T ss_pred             HHHHHH-HHHHh-------CcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc-CEEEeCCCCHHHHHHH
Confidence            999999 87663       34   4678888754322222    344555555544    322 69999975  789999


Q ss_pred             HHhcCEEEecCCCCCCccchHHHHHHHcC---CcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhC-HHH
Q 017085          261 LAAIDVLVQNSQAWGECFGRITIEAMAFQ---LPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH-VER  336 (377)
Q Consensus       261 ~~~adv~l~ps~~~~e~~~~~~~Ea~a~g---~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~-~~~  336 (377)
                      |+.||++++||.  .||||++.+||||||   .|+|+|..+|..+.+  +.+|+++++.|  ++++|++|.+++++ +++
T Consensus       369 y~~ADv~vv~Sl--rEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l--~~~allVnP~D--~~~lA~AI~~aL~m~~~e  442 (496)
T 3t5t_A          369 FRRADLLIFNST--VDGQNLSTFEAPLVNERDADVILSETCGAAEVL--GEYCRSVNPFD--LVEQAEAISAALAAGPRQ  442 (496)
T ss_dssp             HHHCSEEEECCS--SBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHH--GGGSEEECTTB--HHHHHHHHHHHHHCCHHH
T ss_pred             HHhccEEEECcc--cccCChhHHHHHHhCCCCCCEEEeCCCCCHHHh--CCCEEEECCCC--HHHHHHHHHHHHcCCHHH
Confidence            999999999999  999999999999997   899999998888887  34799999998  99999999999995 577


Q ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Q 017085          337 RLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK  370 (377)
Q Consensus       337 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  370 (377)
                      ++++.++.++.+ ..+++..+++.+++-+...-.
T Consensus       443 r~~r~~~~~~~V-~~~d~~~W~~~fl~~L~~~~~  475 (496)
T 3t5t_A          443 RAEAAARRRDAA-RPWTLEAWVQAQLDGLAADHA  475 (496)
T ss_dssp             HHHHHHHHHHHH-TTCBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-HHCCHHHHHHHHHHHHhhccc
Confidence            888888999887 559999999999988877643

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}

Probab=99.96  E-value=3.7e-29  Score=200.01  Aligned_cols=161  Identities=13%  Similarity=0.142  Sum_probs=138.0

Q ss_pred             CeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--
Q 017085          177 DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--  254 (377)
Q Consensus       177 ~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--  254 (377)
                      +++|+|+||+.+.||++.+++++..+.        +.++++|+|+|++     +..+.++++++++++  ++.| |+.  
T Consensus         2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~--------~~~~~~l~i~G~g-----~~~~~~~~~~~~~~~--~v~~-g~~~~   65 (166)
T 3qhp_A            2 PFKIAMVGRYSNEKNQSVLIKAVALSK--------YKQDIVLLLKGKG-----PDEKKIKLLAQKLGV--KAEF-GFVNS   65 (166)
T ss_dssp             CEEEEEESCCSTTTTHHHHHHHHHTCT--------TGGGEEEEEECCS-----TTHHHHHHHHHHHTC--EEEC-CCCCH
T ss_pred             ceEEEEEeccchhcCHHHHHHHHHHhc--------cCCCeEEEEEeCC-----ccHHHHHHHHHHcCC--eEEE-eecCH
Confidence            478999999999999999999998652        2278999999998     467889999999987  7899 986  


Q ss_pred             CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCC-cEEE-eCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          255 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQL-PVLG-TAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       255 ~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~-PvI~-s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                      +++.++|+.||++++||.  .|++|++++|||++|+ |||+ ++.++..+++.++.  .+++++|  +++++++|.++++
T Consensus        66 ~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~--~~~~~~~--~~~l~~~i~~l~~  139 (166)
T 3qhp_A           66 NELLEILKTCTLYVHAAN--VESEAIACLEAISVGIVPVIANSPLSATRQFALDER--SLFEPNN--AKDLSAKIDWWLE  139 (166)
T ss_dssp             HHHHHHHTTCSEEEECCC--SCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGG--GEECTTC--HHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCEEEECCc--ccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCc--eEEcCCC--HHHHHHHHHHHHh
Confidence            789999999999999999  9999999999999998 9999 56888999997654  4777777  9999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 017085          333 HVERRLTMGKRGYERVKEIFQEHHMAER  360 (377)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~  360 (377)
                      |++.+.++++++++.+ ++|+|+.++++
T Consensus       140 ~~~~~~~~~~~~~~~~-~~~s~~~~~~~  166 (166)
T 3qhp_A          140 NKLERERMQNEYAKSA-LNYTLENSVIQ  166 (166)
T ss_dssp             CHHHHHHHHHHHHHHH-HHHC-------
T ss_pred             CHHHHHHHHHHHHHHH-HHCChhhhhcC
Confidence            9999999999999988 78999998864

>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*

Probab=99.96  E-value=4.5e-29  Score=225.15  Aligned_cols=293  Identities=9%  Similarity=0.061  Sum_probs=201.0

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCce--E-EEc---cchhHHHhhhcccEEEEcCchhhhHHHHH
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQ--V-ISA---KGQETINTALKADLIVLNTAVAGKWLDAV   75 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~---~~~~~~~~~~~~Div~~~~~~~~~~~~~~   75 (377)
                      .|+++|.+.| +|.+.+.....  ........     .++.  . ++.   ..+..+++..+||+||++....  |...+
T Consensus        58 ~L~~~L~~~~-~v~v~~~~~~~--~~~~~~~~-----~~v~~~~~~p~~~~~~l~~~l~~~~pDiv~~~~~~~--~~~~~  127 (374)
T 2xci_A           58 PILKELKREH-RILLTYFSPRA--REYLKTKS-----DFYDCLHPLPLDNPFSVKRFEELSKPKALIVVEREF--WPSLI  127 (374)
T ss_dssp             HHHHHHHHHS-CEEEEESCGGG--HHHHHTTG-----GGCSEEEECCCSSHHHHHHHHHHHCCSEEEEESCCC--CHHHH
T ss_pred             HHHHHHHhcC-CEEEEEcCCcH--HHHHHHhc-----ccccceeECCCCCHHHHHHHHHHhCCCEEEEECccC--cHHHH
Confidence            5789999989 88766543211  11111111     1222  1 122   2355667788999999864221  11111


Q ss_pred             hhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhh
Q 017085           76 LKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAE  155 (377)
Q Consensus        76 ~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~  155 (377)
                      .....     |++...+.....   ..+...++.+|.+++.|+..++.+.     .+|++  ++.+++|+.    |....
T Consensus       128 ~~~~~-----p~~~~~~~~~~~---~~~~~~~~~~d~ii~~S~~~~~~l~-----~~g~~--ki~vi~n~~----f~~~~  188 (374)
T 2xci_A          128 IFTKV-----PKILVNAYAKGS---LIEKILSKKFDLIIMRTQEDVEKFK-----TFGAK--RVFSCGNLK----FICQK  188 (374)
T ss_dssp             HHCCS-----CEEEEEECCCCC---HHHHHHHTTCSEEEESCHHHHHHHH-----TTTCC--SEEECCCGG----GCCCC
T ss_pred             HHHhC-----CEEEEEeecCch---HHHHHHHHhCCEEEECCHHHHHHHH-----HcCCC--eEEEcCCCc----cCCCc
Confidence            11111     343333322111   1344556889999999999988776     44665  899999973    11100


Q ss_pred             hhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHH
Q 017085          156 DNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESEL  235 (377)
Q Consensus       156 ~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l  235 (377)
                      ..          ++  .+  ..+++++.|+  ..||++.+++|++.+.+       +.++++|+|+|+++    ...+++
T Consensus       189 ~~----------~~--~l--~~~vi~~~~~--~~k~~~~ll~A~~~l~~-------~~p~~~lvivG~g~----~~~~~l  241 (374)
T 2xci_A          189 GK----------GI--KL--KGEFIVAGSI--HTGEVEIILKAFKEIKK-------TYSSLKLILVPRHI----ENAKIF  241 (374)
T ss_dssp             CS----------CC--CC--SSCEEEEEEE--CGGGHHHHHHHHHHHHT-------TCTTCEEEEEESSG----GGHHHH
T ss_pred             Ch----------hh--hh--cCCEEEEEeC--CCchHHHHHHHHHHHHh-------hCCCcEEEEECCCH----HHHHHH
Confidence            00          00  01  1245666664  46899999999997754       45899999999873    123678


Q ss_pred             HHHHHhcCCC--------CcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe-CCCCcccceec
Q 017085          236 RNYVMQKKIQ--------DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT-AAGGTTEIVVN  306 (377)
Q Consensus       236 ~~~~~~~~~~--------~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s-~~~~~~e~~~~  306 (377)
                      +++++++++.        ++|.+.|..+++..+|+.||++++||.. .|++|++++||||||+|||++ +.++++|++.+
T Consensus       242 ~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ss~-~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~  320 (374)
T 2xci_A          242 EKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVGGTF-VNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEF  320 (374)
T ss_dssp             HHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEECSSS-SSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHH
T ss_pred             HHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEECCcc-cCCCCcCHHHHHHhCCCEEECCCccChHHHHHH
Confidence            8999999886        4688888889999999999998887651 577899999999999999975 68899998865


Q ss_pred             C-cceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCH
Q 017085          307 G-TTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQE  354 (377)
Q Consensus       307 ~-~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~  354 (377)
                      . .+|++++++|  +++|+++|.++++| +.+.+|++++++.+.+++..
T Consensus       321 ~~~~G~l~~~~d--~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ga  366 (374)
T 2xci_A          321 LEKEGAGFEVKN--ETELVTKLTELLSV-KKEIKVEEKSREIKGCYLEK  366 (374)
T ss_dssp             HHHTTCEEECCS--HHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHCCCEEEeCC--HHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcccH
Confidence            3 5788888887  99999999999999 99999999999988775543

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3

Probab=99.95  E-value=4.2e-27  Score=213.32  Aligned_cols=272  Identities=12%  Similarity=0.027  Sum_probs=185.1

Q ss_pred             hhHHHhhhcccEEEEcCchhhhHHHHH--hhcCCCccccceeEEeeeeccccc-----chhhhcc-ccccceeeeeccch
Q 017085           49 QETINTALKADLIVLNTAVAGKWLDAV--LKEDVPRVLPNVLWWIHEMRGHYF-----KLDYVKH-LPLVAGAMIDSHVT  120 (377)
Q Consensus        49 ~~~~~~~~~~Div~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~h~~~~~~~-----~~~~~~~-~~~~~~~~~~s~~~  120 (377)
                      +..++++.+||+||+|+.....+....  ...+     .|++.+.++......     ....... ...++.+++.|...
T Consensus        83 l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~-----ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  157 (376)
T 1v4v_A           83 AARALKEMGADYVLVHGDTLTTFAVAWAAFLEG-----IPVGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFAPTPLA  157 (376)
T ss_dssp             HHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTT-----CCEEEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESSHHH
T ss_pred             HHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhC-----CCEEEEeCCCccccccCCCchHHHHHHHHHHhceeeCCCHHH
Confidence            344556789999999875433232111  2222     355543333321100     0111222 24578899999888


Q ss_pred             hhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHH
Q 017085          121 AEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFY  200 (377)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~  200 (377)
                      .+++.     ..|++.+++.+++|++.........        +..+++.+  ++++++++++||+...||++.+++|++
T Consensus       158 ~~~l~-----~~g~~~~ki~vi~n~~~d~~~~~~~--------~~~~~~~~--~~~~~vl~~~gr~~~~k~~~~ll~a~~  222 (376)
T 1v4v_A          158 KANLL-----KEGKREEGILVTGQTGVDAVLLAAK--------LGRLPEGL--PEGPYVTVTMHRRENWPLLSDLAQALK  222 (376)
T ss_dssp             HHHHH-----TTTCCGGGEEECCCHHHHHHHHHHH--------HCCCCTTC--CSSCEEEECCCCGGGGGGHHHHHHHHH
T ss_pred             HHHHH-----HcCCCcceEEEECCchHHHHhhhhh--------hhHHHHhc--CCCCEEEEEeCcccchHHHHHHHHHHH
Confidence            87776     4477778899999975322211111        01122233  245677788999988889999999999


Q ss_pred             HHHHHHhhhcccCCCeEEEEE-ecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCc
Q 017085          201 ESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGEC  277 (377)
Q Consensus       201 ~l~~~l~~~~~~~~~~~l~i~-G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~  277 (377)
                      .+.+       +.++++++++ |++.    ...+.+++++..   .++|+|+|+.  .++.++|+.||++|.||    + 
T Consensus       223 ~l~~-------~~~~~~lv~~~g~~~----~~~~~l~~~~~~---~~~v~~~g~~g~~~~~~~~~~ad~~v~~S----~-  283 (376)
T 1v4v_A          223 RVAE-------AFPHLTFVYPVHLNP----VVREAVFPVLKG---VRNFVLLDPLEYGSMAALMRASLLLVTDS----G-  283 (376)
T ss_dssp             HHHH-------HCTTSEEEEECCSCH----HHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHTEEEEEESC----H-
T ss_pred             HHHh-------hCCCeEEEEECCCCH----HHHHHHHHHhcc---CCCEEEECCCCHHHHHHHHHhCcEEEECC----c-
Confidence            7754       3478888886 6551    245666666532   3589999543  38999999999999987    2 


Q ss_pred             cchHHHHHHHcCCcEEEe-CCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHH
Q 017085          278 FGRITIEAMAFQLPVLGT-AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHH  356 (377)
Q Consensus       278 ~~~~~~Ea~a~g~PvI~s-~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~  356 (377)
                       |+ ++|||++|+|||++ +.++..+++.++ +|++++ .|  +++|+++|.++++|++.+++|++++     +.|.+..
T Consensus       284 -g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv~-~d--~~~la~~i~~ll~d~~~~~~~~~~~-----~~~~~~~  352 (376)
T 1v4v_A          284 -GL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLAG-TD--PEGVYRVVKGLLENPEELSRMRKAK-----NPYGDGK  352 (376)
T ss_dssp             -HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEECC-SC--HHHHHHHHHHHHTCHHHHHHHHHSC-----CSSCCSC
T ss_pred             -CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEECC-CC--HHHHHHHHHHHHhChHhhhhhcccC-----CCCCCCh
Confidence             33 78999999999987 578888887654 899886 35  9999999999999999999888643     4577777


Q ss_pred             HHHHHHHHHHHHHh
Q 017085          357 MAERIAVVLKEVLK  370 (377)
Q Consensus       357 ~~~~~~~~~~~~~~  370 (377)
                      .++++.+.+.+++.
T Consensus       353 ~~~~i~~~i~~~~~  366 (376)
T 1v4v_A          353 AGLMVARGVAWRLG  366 (376)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhc
Confidence            88888888888765

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8

Probab=99.95  E-value=1.4e-27  Score=192.61  Aligned_cols=145  Identities=22%  Similarity=0.297  Sum_probs=130.3

Q ss_pred             hCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHH--hcCCCCcE
Q 017085          171 LGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVM--QKKIQDRV  248 (377)
Q Consensus       171 ~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~--~~~~~~~v  248 (377)
                      +.++.++++|+|+|++.+.||++.+++++..+           ++++|+|+|.+..     .+.+++.++  +++++++|
T Consensus        17 ~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l-----------~~~~l~i~G~~~~-----~~~l~~~~~~~~~~l~~~v   80 (177)
T 2f9f_A           17 FKFKCYGDFWLSVNRIYPEKRIELQLEVFKKL-----------QDEKLYIVGWFSK-----GDHAERYARKIMKIAPDNV   80 (177)
T ss_dssp             CCCCCCCSCEEEECCSSGGGTHHHHHHHHHHC-----------TTSCEEEEBCCCT-----TSTHHHHHHHHHHHSCTTE
T ss_pred             cccCCCCCEEEEEeccccccCHHHHHHHHHhC-----------CCcEEEEEecCcc-----HHHHHHHHHhhhcccCCcE
Confidence            45667888999999999999999999999865           6799999999853     356777777  77888999


Q ss_pred             EEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHH
Q 017085          249 HFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKN  326 (377)
Q Consensus       249 ~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~  326 (377)
                      +|+|++  +++.++|+.||++++||.  .|++|++++|||++|+|||+++.++..+++.++.+|+++ +.|  +++++++
T Consensus        81 ~~~g~~~~~e~~~~~~~adi~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-~~d--~~~l~~~  155 (177)
T 2f9f_A           81 KFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-NAD--VNEIIDA  155 (177)
T ss_dssp             EEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-CSC--HHHHHHH
T ss_pred             EEeCCCCHHHHHHHHHhCCEEEeCCC--cCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-CCC--HHHHHHH
Confidence            999998  459999999999999999  999999999999999999999999999999999999999 777  9999999


Q ss_pred             HHHHhhCHHH
Q 017085          327 IVKLATHVER  336 (377)
Q Consensus       327 i~~l~~~~~~  336 (377)
                      |.++++|++.
T Consensus       156 i~~l~~~~~~  165 (177)
T 2f9f_A          156 MKKVSKNPDK  165 (177)
T ss_dssp             HHHHHHCTTT
T ss_pred             HHHHHhCHHH
Confidence            9999998875

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}

Probab=99.90  E-value=1.5e-22  Score=183.75  Aligned_cols=278  Identities=14%  Similarity=0.160  Sum_probs=181.7

Q ss_pred             chhHHHhhhcccEEEEcCchhhhHHH--HHhhcCCCccccceeEEeeeecc-cc---cch-hhhcc-ccccceeeeeccc
Q 017085           48 GQETINTALKADLIVLNTAVAGKWLD--AVLKEDVPRVLPNVLWWIHEMRG-HY---FKL-DYVKH-LPLVAGAMIDSHV  119 (377)
Q Consensus        48 ~~~~~~~~~~~Div~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~h~~~~-~~---~~~-~~~~~-~~~~~~~~~~s~~  119 (377)
                      .+..++++.+||+|++++.....+..  ++...+     .|++...++... .+   +.. ..+.. ...++.+++.++.
T Consensus       102 ~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~-----IPv~h~~ag~rs~~~~~~~~~~~~r~~~~~~a~~~~~~se~  176 (396)
T 3dzc_A          102 GMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQ-----IPVGHVEAGLRTGNIYSPWPEEGNRKLTAALTQYHFAPTDT  176 (396)
T ss_dssp             HHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTT-----CCEEEETCCCCCSCTTSSTTHHHHHHHHHHTCSEEEESSHH
T ss_pred             HHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhC-----CCEEEEECCccccccccCCcHHHHHHHHHHhcCEEECCCHH
Confidence            34556678999999999866543332  222223     355433332211 11   111 12222 2566888999998


Q ss_pred             hhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhC-CCCC-CeEEEEecccc-ccchhHHHH
Q 017085          120 TAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLG-VRNE-DLLFAIINSVS-RGKGQDLFL  196 (377)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~-~~~i~~~G~~~-~~Kg~~~ll  196 (377)
                      ..+++.     ..|++++++.+++|++.................+..+++++| ++++ ++++++.+|.. ..|+++.++
T Consensus       177 ~~~~l~-----~~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~ll  251 (396)
T 3dzc_A          177 SRANLL-----QENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERIC  251 (396)
T ss_dssp             HHHHHH-----HTTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTHHHHHH
T ss_pred             HHHHHH-----HcCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchhHHHHHH
Confidence            888776     568888899999986533222111110000111367888999 4544 44555555543 357899999


Q ss_pred             HHHHHHHHHHhhhcccCCCeEEEEE-ecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCC
Q 017085          197 HSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQA  273 (377)
Q Consensus       197 ~a~~~l~~~l~~~~~~~~~~~l~i~-G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~  273 (377)
                      +|+..+.+       +++++++++. |.++    ...+.+++.   ++..++|++.++.  .++..+|+.||+++.+|  
T Consensus       252 ~A~~~l~~-------~~~~~~~v~~~g~~~----~~~~~l~~~---~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S--  315 (396)
T 3dzc_A          252 QALITTAE-------QHPECQILYPVHLNP----NVREPVNKL---LKGVSNIVLIEPQQYLPFVYLMDRAHIILTDS--  315 (396)
T ss_dssp             HHHHHHHH-------HCTTEEEEEECCBCH----HHHHHHHHH---TTTCTTEEEECCCCHHHHHHHHHHCSEEEESC--
T ss_pred             HHHHHHHH-------hCCCceEEEEeCCCh----HHHHHHHHH---HcCCCCEEEeCCCCHHHHHHHHHhcCEEEECC--
Confidence            99997755       3478998886 5441    234444443   2445689998876  57889999999999877  


Q ss_pred             CCCccchHHHHHHHcCCcEEEe-CCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhc
Q 017085          274 WGECFGRITIEAMAFQLPVLGT-AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIF  352 (377)
Q Consensus       274 ~~e~~~~~~~Ea~a~g~PvI~s-~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f  352 (377)
                         | | ...|||++|+|||++ +.++.++.+.+| .+++++. |  .+++++++.++++|++.+.+|++++..     |
T Consensus       316 ---G-g-~~~EA~a~G~PvV~~~~~~~~~e~v~~G-~~~lv~~-d--~~~l~~ai~~ll~d~~~~~~m~~~~~~-----~  381 (396)
T 3dzc_A          316 ---G-G-IQEEAPSLGKPVLVMRETTERPEAVAAG-TVKLVGT-N--QQQICDALSLLLTDPQAYQAMSQAHNP-----Y  381 (396)
T ss_dssp             ---S-G-GGTTGGGGTCCEEECCSSCSCHHHHHHT-SEEECTT-C--HHHHHHHHHHHHHCHHHHHHHHTSCCT-----T
T ss_pred             ---c-c-HHHHHHHcCCCEEEccCCCcchHHHHcC-ceEEcCC-C--HHHHHHHHHHHHcCHHHHHHHhhccCC-----C
Confidence               1 3 338999999999999 688888888776 5677764 5  999999999999999999998876543     4


Q ss_pred             CHHHHHHHHHHHH
Q 017085          353 QEHHMAERIAVVL  365 (377)
Q Consensus       353 ~~~~~~~~~~~~~  365 (377)
                      .....++++.+++
T Consensus       382 ~~~~aa~ri~~~l  394 (396)
T 3dzc_A          382 GDGKACQRIADIL  394 (396)
T ss_dssp             CCSCHHHHHHHHH
T ss_pred             cCChHHHHHHHHH
Confidence            5555555555544

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*

Probab=99.88  E-value=1.5e-22  Score=178.48  Aligned_cols=244  Identities=10%  Similarity=0.038  Sum_probs=170.6

Q ss_pred             hhcccEEEEcCchh-h-hHHHHHhhcCCCccccceeEEeeeecccccch------hhhccccccceeeeeccchhhHhhh
Q 017085           55 ALKADLIVLNTAVA-G-KWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL------DYVKHLPLVAGAMIDSHVTAEYWKN  126 (377)
Q Consensus        55 ~~~~Div~~~~~~~-~-~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~------~~~~~~~~~~~~~~~s~~~~~~~~~  126 (377)
                      ..++|+|++++|.. + .+...++.. ++....|+++.+|++++..+..      .....++.+|.+++.|+.+.+++. 
T Consensus        72 ~~~~DvIi~q~P~~~~~~~~~~~~~~-lk~~~~k~i~~ihDl~pl~~~~~~~~~~~E~~~y~~aD~Ii~~S~~~~~~l~-  149 (339)
T 3rhz_A           72 LRHGDVVIFQTPTWNTTEFDEKLMNK-LKLYDIKIVLFIHDVVPLMFSGNFYLMDRTIAYYNKADVVVAPSQKMIDKLR-  149 (339)
T ss_dssp             CCTTCEEEEEECCSSCHHHHHHHHHH-HTTSSCEEEEEESCCHHHHCGGGGGGHHHHHHHHTTCSEEEESCHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcchhhHHHHHHHH-HHhcCCEEEEEecccHHhhCccchhhHHHHHHHHHHCCEEEECCHHHHHHHH-
Confidence            47799999998763 1 121222221 1122468999999997643321      224456899999999999998887 


Q ss_pred             hhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHH
Q 017085          127 RTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELI  206 (377)
Q Consensus       127 ~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l  206 (377)
                          ..|++..++.++++. +...  ..+               ...+.++++++|+|++.....++.+           
T Consensus       150 ----~~G~~~~ki~~~~~~-~~~~--~~~---------------~~~~~~~~~i~yaG~l~k~~~L~~l-----------  196 (339)
T 3rhz_A          150 ----DFGMNVSKTVVQGMW-DHPT--QAP---------------MFPAGLKREIHFPGNPERFSFVKEW-----------  196 (339)
T ss_dssp             ----HTTCCCSEEEECCSC-CCCC--CCC---------------CCCCEEEEEEEECSCTTTCGGGGGC-----------
T ss_pred             ----HcCCCcCceeecCCC-CccC--ccc---------------ccccCCCcEEEEeCCcchhhHHHhC-----------
Confidence                457765666444332 2110  000               0112455889999999853322211           


Q ss_pred             hhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCC-----CCCccc
Q 017085          207 KEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQA-----WGECFG  279 (377)
Q Consensus       207 ~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~-----~~e~~~  279 (377)
                            .++++|+|+|+|+.     .          .++ +|+|+|++  +++..+++.+|+.++....     ...++|
T Consensus       197 ------~~~~~f~ivG~G~~-----~----------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P  254 (339)
T 3rhz_A          197 ------KYDIPLKVYTWQNV-----E----------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCS  254 (339)
T ss_dssp             ------CCSSCEEEEESCCC-----C----------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCC
T ss_pred             ------CCCCeEEEEeCCcc-----c----------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcCh
Confidence                  17899999999953     1          244 89999987  8899999999988876220     013579


Q ss_pred             hHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHH
Q 017085          280 RITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAE  359 (377)
Q Consensus       280 ~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~  359 (377)
                      .+++||||+|+|||+++.++.++++.++++|++++  +  .++++++|..+  +++.+.+|++++++.. ++++++.+.+
T Consensus       255 ~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~~--~--~~e~~~~i~~l--~~~~~~~m~~na~~~a-~~~~~~~f~k  327 (339)
T 3rhz_A          255 YKLGSFLAAGIPVIVQEGIANQELIENNGLGWIVK--D--VEEAIMKVKNV--NEDEYIELVKNVRSFN-PILRKGFFTR  327 (339)
T ss_dssp             HHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEEES--S--HHHHHHHHHHC--CHHHHHHHHHHHHHHT-HHHHTTHHHH
T ss_pred             HHHHHHHHcCCCEEEccChhHHHHHHhCCeEEEeC--C--HHHHHHHHHHh--CHHHHHHHHHHHHHHH-HHhhccHHHH
Confidence            99999999999999999999999999999999987  3  88999999886  4677899999999865 4466666655


Q ss_pred             HHH
Q 017085          360 RIA  362 (377)
Q Consensus       360 ~~~  362 (377)
                      +.+
T Consensus       328 ~~l  330 (339)
T 3rhz_A          328 RLL  330 (339)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*

Probab=99.88  E-value=2.4e-21  Score=177.62  Aligned_cols=165  Identities=12%  Similarity=0.117  Sum_probs=127.6

Q ss_pred             CCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc
Q 017085          175 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT  254 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~  254 (377)
                      ++.++++++|++. .++.+.+.+++..+.+         .++++++++++...    .+.++      .++++|.+.|+.
T Consensus       241 ~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~---------~~~~~~~~~g~~~~----~~~l~------~~~~~v~~~~~~  300 (412)
T 3otg_A          241 ARPLVYLTLGTSS-GGTVEVLRAAIDGLAG---------LDADVLVASGPSLD----VSGLG------EVPANVRLESWV  300 (412)
T ss_dssp             TSCEEEEECTTTT-CSCHHHHHHHHHHHHT---------SSSEEEEECCSSCC----CTTCC------CCCTTEEEESCC
T ss_pred             CCCEEEEEcCCCC-cCcHHHHHHHHHHHHc---------CCCEEEEEECCCCC----hhhhc------cCCCcEEEeCCC
Confidence            4557788889886 6777777766664432         46777777665321    11111      246799999998


Q ss_pred             CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC----cccceecCcceeeecCCCCChhHHHHHHHHH
Q 017085          255 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLAKNIVKL  330 (377)
Q Consensus       255 ~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~----~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l  330 (377)
                       ++.++|+.||++|.++-      +++++|||++|+|+|+...++    ..+.+.+.+.|+++++++.++++|+++|.++
T Consensus       301 -~~~~~l~~ad~~v~~~g------~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~l  373 (412)
T 3otg_A          301 -PQAALLPHVDLVVHHGG------SGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRL  373 (412)
T ss_dssp             -CHHHHGGGCSEEEESCC------HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHH
T ss_pred             -CHHHHHhcCcEEEECCc------hHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHH
Confidence             89999999999996653      579999999999999976543    6777777889999987632399999999999


Q ss_pred             hhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 017085          331 ATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE  367 (377)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~  367 (377)
                      ++|++.+.++++.+++.. +.++++.+++.+++++.+
T Consensus       374 l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~  409 (412)
T 3otg_A          374 LAEESYRAGARAVAAEIA-AMPGPDEVVRLLPGFASR  409 (412)
T ss_dssp             HHCHHHHHHHHHHHHHHH-HSCCHHHHHTTHHHHHC-
T ss_pred             HhCHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHhcc
Confidence            999999999999988865 558999999999988754

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=99.88  E-value=1.6e-20  Score=168.69  Aligned_cols=299  Identities=14%  Similarity=0.042  Sum_probs=181.8

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEc------------------------cchhHHHhhhc
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA------------------------KGQETINTALK   57 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~   57 (377)
                      .||++|+++||+|++++...+.+..        .+...|+++...                        .....++++.+
T Consensus        21 ala~~L~~~g~~V~~vg~~~g~e~~--------~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   92 (365)
T 3s2u_A           21 ACAREFQARGYAVHWLGTPRGIEND--------LVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSLFQALRVIRQLR   92 (365)
T ss_dssp             HHHHHHHHTTCEEEEEECSSSTHHH--------HTGGGTCCEEECC--------------CHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhCCCEEEEEECCchHhhc--------hhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            4789999999999999865432111        111223322110                        01234567899


Q ss_pred             ccEEEEcCchhhhHH-HHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhhhhhhhhccC
Q 017085           58 ADLIVLNTAVAGKWL-DAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKM  136 (377)
Q Consensus        58 ~Div~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~  136 (377)
                      ||+|+++....+... .++...++     |++.  |+... ......+...+.++.++.......            ...
T Consensus        93 PDvVi~~g~~~s~p~~laA~~~~i-----P~vi--he~n~-~~G~~nr~l~~~a~~v~~~~~~~~------------~~~  152 (365)
T 3s2u_A           93 PVCVLGLGGYVTGPGGLAARLNGV-----PLVI--HEQNA-VAGTANRSLAPIARRVCEAFPDTF------------PAS  152 (365)
T ss_dssp             CSEEEECSSSTHHHHHHHHHHTTC-----CEEE--EECSS-SCCHHHHHHGGGCSEEEESSTTSS------------CC-
T ss_pred             CCEEEEcCCcchHHHHHHHHHcCC-----CEEE--Eecch-hhhhHHHhhccccceeeecccccc------------cCc
Confidence            999999986644332 22233333     5553  44311 112222223355566655443221            123


Q ss_pred             CCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCe-EEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCC
Q 017085          137 PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDL-LFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPS  215 (377)
Q Consensus       137 ~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~  215 (377)
                      .++.++.|++....+...             +...+++++++ ++++.|++...+.-+.+.+++..+.    .    ..+
T Consensus       153 ~k~~~~g~pvr~~~~~~~-------------~~~~~~~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~----~----~~~  211 (365)
T 3s2u_A          153 DKRLTTGNPVRGELFLDA-------------HARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALAQVP----L----EIR  211 (365)
T ss_dssp             --CEECCCCCCGGGCCCT-------------TSSCCCTTSCCEEEECCTTTTCSHHHHHHHHHHHTSC----T----TTC
T ss_pred             CcEEEECCCCchhhccch-------------hhhcccCCCCcEEEEECCcCCccccchhhHHHHHhcc----c----ccc
Confidence            567778888876654321             22344555554 4445577776666677777766442    1    134


Q ss_pred             eEEEE-EecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEE
Q 017085          216 VHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLG  294 (377)
Q Consensus       216 ~~l~i-~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~  294 (377)
                      +.+++ +|.+      ..+.+.+..++.+.  ++.+.++.+++.++|+.||++|..+      .++++.|+|++|+|+|.
T Consensus       212 ~~vi~~~G~~------~~~~~~~~~~~~~~--~~~v~~f~~dm~~~l~~aDlvI~ra------G~~Tv~E~~a~G~P~Il  277 (365)
T 3s2u_A          212 PAIRHQAGRQ------HAEITAERYRTVAV--EADVAPFISDMAAAYAWADLVICRA------GALTVSELTAAGLPAFL  277 (365)
T ss_dssp             CEEEEECCTT------THHHHHHHHHHTTC--CCEEESCCSCHHHHHHHCSEEEECC------CHHHHHHHHHHTCCEEE
T ss_pred             eEEEEecCcc------ccccccceeccccc--ccccccchhhhhhhhccceEEEecC------CcchHHHHHHhCCCeEE
Confidence            55544 4443      34556666666654  5788899999999999999999433      37899999999999998


Q ss_pred             eCCCCc--------ccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 017085          295 TAAGGT--------TEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVV  364 (377)
Q Consensus       295 s~~~~~--------~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~  364 (377)
                      .+.+..        ++.+.+.+.|++++..+.+++.|+++|.++++|++.+++|++++++... ....+++++.++++
T Consensus       278 ip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~~-~~aa~~ia~~i~~l  354 (365)
T 3s2u_A          278 VPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAK-PEATRTVVDACLEV  354 (365)
T ss_dssp             CC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTCC-TTHHHHHHHHHHHH
T ss_pred             eccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcCC-ccHHHHHHHHHHHH
Confidence            765432        2345566688998876656899999999999999999999999987432 23444444444444

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}

Probab=99.88  E-value=1.9e-21  Score=176.62  Aligned_cols=276  Identities=14%  Similarity=0.133  Sum_probs=180.4

Q ss_pred             chhHHHhhhcccEEEEcCchhhhHHH--HHhhcCCCccccceeEEeeeecc-cc---c-chhhhccc-cccceeeeeccc
Q 017085           48 GQETINTALKADLIVLNTAVAGKWLD--AVLKEDVPRVLPNVLWWIHEMRG-HY---F-KLDYVKHL-PLVAGAMIDSHV  119 (377)
Q Consensus        48 ~~~~~~~~~~~Div~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~h~~~~-~~---~-~~~~~~~~-~~~~~~~~~s~~  119 (377)
                      .+..++++.+||+|++++.....+..  ++...++     |++....+... ..   + ....+..+ ..++.+++.++.
T Consensus       105 ~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~I-----Pv~h~~aglrs~~~~~~~p~~~~r~~~~~~a~~~~~~se~  179 (403)
T 3ot5_A          105 GINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQK-----MLGHVEAGLRTWNKYSPFPEEMNRQLTGVMADIHFSPTKQ  179 (403)
T ss_dssp             HHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTC-----EEEEESCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESSHH
T ss_pred             HHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCC-----CEEEEECCccccccccCCcHHHHHHHHHHhcCEEECCCHH
Confidence            34556678999999999865433322  2222233     54432222211 11   1 11122223 346778888888


Q ss_pred             hhhHhhhhhhhhhhccCCCeEEEEcCC-hhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccc-cchhHHHHH
Q 017085          120 TAEYWKNRTRERLRIKMPDTYVVHLGN-SKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR-GKGQDLFLH  197 (377)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~vi~ngi-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~-~Kg~~~ll~  197 (377)
                      ..+++.     ..|++++++.+++|+. |...+....      ..+...++++  ++++++++++||... .|+++.+++
T Consensus       180 ~~~~l~-----~~Gi~~~~i~vvGn~~~D~~~~~~~~------~~~~~~~~~l--~~~~~vlv~~~r~~~~~~~l~~ll~  246 (403)
T 3ot5_A          180 AKENLL-----AEGKDPATIFVTGNTAIDALKTTVQK------DYHHPILENL--GDNRLILMTAHRRENLGEPMQGMFE  246 (403)
T ss_dssp             HHHHHH-----HTTCCGGGEEECCCHHHHHHHHHSCT------TCCCHHHHSC--TTCEEEEECCCCHHHHTTHHHHHHH
T ss_pred             HHHHHH-----HcCCCcccEEEeCCchHHHHHhhhhh------hcchHHHHhc--cCCCEEEEEeCcccccCcHHHHHHH
Confidence            888776     5688888999999864 433221110      0012345555  445566666777533 478899999


Q ss_pred             HHHHHHHHHhhhcccCCCeEEEEEe-cCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCC
Q 017085          198 SFYESLELIKEKKLEVPSVHAVIIG-SDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAW  274 (377)
Q Consensus       198 a~~~l~~~l~~~~~~~~~~~l~i~G-~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~  274 (377)
                      ++..+.+       +++++++++.+ .++    ...+.+++.   ++..++|+++++.  .++..+|+.||+++.+|   
T Consensus       247 a~~~l~~-------~~~~~~~v~~~~~~~----~~~~~l~~~---~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S---  309 (403)
T 3ot5_A          247 AVREIVE-------SREDTELVYPMHLNP----AVREKAMAI---LGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS---  309 (403)
T ss_dssp             HHHHHHH-------HCTTEEEEEECCSCH----HHHHHHHHH---HTTCTTEEEECCCCHHHHHHHHHHEEEEEECC---
T ss_pred             HHHHHHH-------hCCCceEEEecCCCH----HHHHHHHHH---hCCCCCEEEeCCCCHHHHHHHHHhcCEEEECC---
Confidence            9987765       34789998874 331    133444433   3344689999987  48999999999998766   


Q ss_pred             CCccchHHHHHHHcCCcEEEe-CCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcC
Q 017085          275 GECFGRITIEAMAFQLPVLGT-AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQ  353 (377)
Q Consensus       275 ~e~~~~~~~Ea~a~g~PvI~s-~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~  353 (377)
                          |...+||+++|+|+|++ +.++.++.+..| +|++++. |  .+++++++.++++|++.+++|+.++..     |.
T Consensus       310 ----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv~~-d--~~~l~~ai~~ll~~~~~~~~m~~~~~~-----~g  376 (403)
T 3ot5_A          310 ----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLIGT-N--KENLIKEALDLLDNKESHDKMAQAANP-----YG  376 (403)
T ss_dssp             ----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEECCS-C--HHHHHHHHHHHHHCHHHHHHHHHSCCT-----TC
T ss_pred             ----ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEcCC-C--HHHHHHHHHHHHcCHHHHHHHHhhcCc-----cc
Confidence                33448999999999999 678888888655 8888875 5  999999999999999999888765543     45


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q 017085          354 EHHMAERIAVVLKEVLKK  371 (377)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~  371 (377)
                      ....++++.+++.+.+..
T Consensus       377 ~~~aa~rI~~~l~~~l~~  394 (403)
T 3ot5_A          377 DGFAANRILAAIKSHFEE  394 (403)
T ss_dssp             CSCHHHHHHHHHHHHHTC
T ss_pred             CCcHHHHHHHHHHHHhCC
Confidence            555566666666665543

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*

Probab=99.82  E-value=1.5e-19  Score=164.83  Aligned_cols=158  Identities=11%  Similarity=0.109  Sum_probs=107.4

Q ss_pred             CCCeEEEEeccccccc----------hhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCC
Q 017085          175 NEDLLFAIINSVSRGK----------GQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI  244 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~K----------g~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~  244 (377)
                      +..++++++|++...+          .++.+++++..            .++++++++++.     ..+.+.      .+
T Consensus       226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~------------~~~~~v~~~~~~-----~~~~l~------~~  282 (398)
T 4fzr_A          226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPK------------LGFEVVVAVSDK-----LAQTLQ------PL  282 (398)
T ss_dssp             SSCEEECC----------------CCSHHHHHHHGGG------------GTCEEEECCCC-------------------C
T ss_pred             CCCEEEEEccCcccccccccccchHHHHHHHHHHHHh------------CCCEEEEEeCCc-----chhhhc------cC
Confidence            4567788889996555          34444444432            368888888763     222222      24


Q ss_pred             CCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe----CCCCcccceecCcceeeecCCCCCh
Q 017085          245 QDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT----AAGGTTEIVVNGTTGLLHPVGKEGI  320 (377)
Q Consensus       245 ~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s----~~~~~~e~~~~~~~g~~~~~~~~~~  320 (377)
                      +++|.+.|+. ++.++|..||++|..      +.+++++|||++|+|+|+.    +..+..+.+.+.+.|++++..+.+.
T Consensus       283 ~~~v~~~~~~-~~~~ll~~ad~~v~~------gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~  355 (398)
T 4fzr_A          283 PEGVLAAGQF-PLSAIMPACDVVVHH------GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGV  355 (398)
T ss_dssp             CTTEEEESCC-CHHHHGGGCSEEEEC------CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC------
T ss_pred             CCcEEEeCcC-CHHHHHhhCCEEEec------CCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCH
Confidence            6799999997 689999999999943      3478999999999999995    4456777788888999998763338


Q ss_pred             hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 017085          321 TPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAV  363 (377)
Q Consensus       321 ~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~  363 (377)
                      ++++++|.++++|++.++++++.+++.. +..+++.+++.+++
T Consensus       356 ~~l~~ai~~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~  397 (398)
T 4fzr_A          356 ESVLAACARIRDDSSYVGNARRLAAEMA-TLPTPADIVRLIEQ  397 (398)
T ss_dssp             -CHHHHHHHHHHCTHHHHHHHHHHHHHT-TSCCHHHHHHHHTC
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHH-cCCCHHHHHHHHhc
Confidence            9999999999999999999988888754 56899888877653

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}

Probab=99.81  E-value=1.2e-18  Score=160.63  Aligned_cols=167  Identities=15%  Similarity=0.164  Sum_probs=119.4

Q ss_pred             CCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEE-EEecCCCcccHHHHHHHHHHHhcCCCCcEEEecC
Q 017085          175 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAV-IIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK  253 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~-i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~  253 (377)
                      ++.++++++|++. .++.+.+..++..    +++    .++++++ ++|.+..     .+.+.      .++++|.+.|+
T Consensus       231 ~~~~v~v~~Gs~~-~~~~~~~~~~~~~----l~~----~~~~~~~~~~G~~~~-----~~~l~------~~~~~v~~~~~  290 (430)
T 2iyf_A          231 AEKVVLVSLGSAF-TKQPAFYRECVRA----FGN----LPGWHLVLQIGRKVT-----PAELG------ELPDNVEVHDW  290 (430)
T ss_dssp             CSEEEEEECTTTC-C-CHHHHHHHHHH----HTT----CTTEEEEEECC---C-----GGGGC------SCCTTEEEESS
T ss_pred             CCCeEEEEcCCCC-CCcHHHHHHHHHH----Hhc----CCCeEEEEEeCCCCC-----hHHhc------cCCCCeEEEec
Confidence            3457888899987 4444444443332    221    1468884 6787632     12221      24678999999


Q ss_pred             cCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC----cccceecCcceeeecCCCCChhHHHHHHHH
Q 017085          254 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLAKNIVK  329 (377)
Q Consensus       254 ~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~----~~e~~~~~~~g~~~~~~~~~~~~la~~i~~  329 (377)
                      .++. ++|+.||+++..+-      +++++|||++|+|+|++..++    ..+.+.+.+.|+.++.++.+.++++++|.+
T Consensus       291 ~~~~-~~l~~ad~~v~~~G------~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~  363 (430)
T 2iyf_A          291 VPQL-AILRQADLFVTHAG------AGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALA  363 (430)
T ss_dssp             CCHH-HHHTTCSEEEECCC------HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHH
T ss_pred             CCHH-HHhhccCEEEECCC------ccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHH
Confidence            8777 89999999987542      479999999999999997654    455666777899988763338999999999


Q ss_pred             HhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 017085          330 LATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVL  369 (377)
Q Consensus       330 l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  369 (377)
                      +++|++.++++++.+++.. +.++++.+++.+++++.+..
T Consensus       364 ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~  402 (430)
T 2iyf_A          364 LVDDPEVARRLRRIQAEMA-QEGGTRRAADLIEAELPARH  402 (430)
T ss_dssp             HHHCHHHHHHHHHHHHHHH-HHCHHHHHHHHHHTTSCC--
T ss_pred             HHcCHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHhhccc
Confidence            9999999999999888755 45899999999988876544

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*

Probab=99.79  E-value=8.4e-19  Score=159.52  Aligned_cols=165  Identities=11%  Similarity=0.109  Sum_probs=122.8

Q ss_pred             CCCeEEEEeccccccchh-HHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecC
Q 017085          175 NEDLLFAIINSVSRGKGQ-DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK  253 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~Kg~-~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~  253 (377)
                      ++..++++.|+....++. ..+++++.+. +       +.+++++++++++.     ..+.+.      ++++++++.|+
T Consensus       217 ~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~-------~~p~~~~v~~~~~~-----~~~~l~------~~~~~v~~~~~  277 (391)
T 3tsa_A          217 SARRVCICMGRMVLNATGPAPLLRAVAAA-T-------ELPGVEAVIAVPPE-----HRALLT------DLPDNARIAES  277 (391)
T ss_dssp             SSEEEEEECCHHHHHHHCSHHHHHHHHHH-H-------TSTTEEEEEECCGG-----GGGGCT------TCCTTEEECCS
T ss_pred             CCCEEEEEcCCCCCcccchHHHHHHHHHh-c-------cCCCeEEEEEECCc-----chhhcc------cCCCCEEEecc
Confidence            345677778988765555 7777776654 4       44689999998863     222221      34679999999


Q ss_pred             cCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC----CCCcccceecCcceeeecC--CCCChhHHHHHH
Q 017085          254 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA----AGGTTEIVVNGTTGLLHPV--GKEGITPLAKNI  327 (377)
Q Consensus       254 ~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~----~~~~~e~~~~~~~g~~~~~--~~~~~~~la~~i  327 (377)
                      . +..+++..||++|..      +.+++++|||++|+|+|+..    ..+..+.+.+.+.|.++++  .+.+.+++++++
T Consensus       278 ~-~~~~ll~~ad~~v~~------~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai  350 (391)
T 3tsa_A          278 V-PLNLFLRTCELVICA------GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSI  350 (391)
T ss_dssp             C-CGGGTGGGCSEEEEC------CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHH
T ss_pred             C-CHHHHHhhCCEEEeC------CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHH
Confidence            7 456788999999943      34578999999999999954    3456667777889999987  222399999999


Q ss_pred             HHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 017085          328 VKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK  366 (377)
Q Consensus       328 ~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  366 (377)
                      .++++|++.++++++.+++. .+..+++.+++.++++..
T Consensus       351 ~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~  388 (391)
T 3tsa_A          351 ATVLGDTGFAAAAIKLSDEI-TAMPHPAALVRTLENTAA  388 (391)
T ss_dssp             HHHHTCTHHHHHHHHHHHHH-HTSCCHHHHHHHHHHC--
T ss_pred             HHHHcCHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHh
Confidence            99999999999998888775 466899888888776654

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}

Probab=99.78  E-value=5.3e-18  Score=154.74  Aligned_cols=164  Identities=13%  Similarity=0.125  Sum_probs=116.1

Q ss_pred             CCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEE-EecCCCcccHHHHHHHHHHHhcCCCCcEEEecC
Q 017085          175 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK  253 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i-~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~  253 (377)
                      +...++++.|+....+. +.+..++.    .+.+     .++++++ +|++..     .+.+.      .+++++.+.|+
T Consensus       230 ~~~~v~v~~G~~~~~~~-~~~~~~~~----~~~~-----~~~~~~~~~g~~~~-----~~~~~------~~~~~v~~~~~  288 (402)
T 3ia7_A          230 DAPVLLVSLGNQFNEHP-EFFRACAQ----AFAD-----TPWHVVMAIGGFLD-----PAVLG------PLPPNVEAHQW  288 (402)
T ss_dssp             TCCEEEEECCSCSSCCH-HHHHHHHH----HHTT-----SSCEEEEECCTTSC-----GGGGC------SCCTTEEEESC
T ss_pred             CCCEEEEECCCCCcchH-HHHHHHHH----HHhc-----CCcEEEEEeCCcCC-----hhhhC------CCCCcEEEecC
Confidence            45677888898865542 22222222    2222     3466665 454421     11111      24679999999


Q ss_pred             cCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCC-----CCcccceecCcceeeecCCCCChhHHHHHHH
Q 017085          254 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA-----GGTTEIVVNGTTGLLHPVGKEGITPLAKNIV  328 (377)
Q Consensus       254 ~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~-----~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~  328 (377)
                      .++. ++|+.||+++..+-      ..+++|||++|+|+|+...     .+..+.+.+.+.|..++.++.+.+++++++.
T Consensus       289 ~~~~-~ll~~ad~~v~~~G------~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~  361 (402)
T 3ia7_A          289 IPFH-SVLAHARACLTHGT------TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVE  361 (402)
T ss_dssp             CCHH-HHHTTEEEEEECCC------HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHH
T ss_pred             CCHH-HHHhhCCEEEECCC------HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHH
Confidence            8777 99999999996542      4788999999999995543     4566777778899988876334899999999


Q ss_pred             HHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 017085          329 KLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE  367 (377)
Q Consensus       329 ~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~  367 (377)
                      ++++|++.++++++.+.+. .+..+++.+++.+++++.+
T Consensus       362 ~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~  399 (402)
T 3ia7_A          362 RLAADSAVRERVRRMQRDI-LSSGGPARAADEVEAYLGR  399 (402)
T ss_dssp             HHHHCHHHHHHHHHHHHHH-HTSCHHHHHHHHHHHHHHH
T ss_pred             HHHcCHHHHHHHHHHHHHH-hhCChHHHHHHHHHHHHhh
Confidence            9999999988888877764 4568888888888887754

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*

Probab=99.76  E-value=1.6e-17  Score=151.34  Aligned_cols=159  Identities=17%  Similarity=0.107  Sum_probs=118.0

Q ss_pred             CCCeEEEEecccccc-chhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecC
Q 017085          175 NEDLLFAIINSVSRG-KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK  253 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~-Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~  253 (377)
                      +.+++++++|++... ++.+.+.+++..+.+         .++++++++++...     +.+      ..++++|.+.|+
T Consensus       231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~---------~~~~~v~~~g~~~~-----~~l------~~~~~~v~~~~~  290 (398)
T 3oti_A          231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGE---------VDADFVLALGDLDI-----SPL------GTLPRNVRAVGW  290 (398)
T ss_dssp             SSCEEEECCTTTHHHHHCGGGHHHHHHHHHT---------SSSEEEEECTTSCC-----GGG------CSCCTTEEEESS
T ss_pred             CCCEEEEEcCCCccccCcHHHHHHHHHHHHc---------CCCEEEEEECCcCh-----hhh------ccCCCcEEEEcc
Confidence            455778888998654 355555555443322         46899998886421     111      134679999999


Q ss_pred             cCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEE----eCCCCcc--cceecCcceeeecCCCCChhHHHHHH
Q 017085          254 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLG----TAAGGTT--EIVVNGTTGLLHPVGKEGITPLAKNI  327 (377)
Q Consensus       254 ~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~----s~~~~~~--e~~~~~~~g~~~~~~~~~~~~la~~i  327 (377)
                      . ++.++|..||++|..      +.+.++.|||++|+|+|+    .+..+..  +.+.+.+.|+.++..+.+.+.++   
T Consensus       291 ~-~~~~ll~~ad~~v~~------~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~---  360 (398)
T 3oti_A          291 T-PLHTLLRTCTAVVHH------GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR---  360 (398)
T ss_dssp             C-CHHHHHTTCSEEEEC------CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH---
T ss_pred             C-CHHHHHhhCCEEEEC------CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH---
Confidence            8 899999999999953      346789999999999999    5667788  88888889999876532355554   


Q ss_pred             HHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017085          328 VKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL  365 (377)
Q Consensus       328 ~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~  365 (377)
                       ++++|++.++++++.+++. .+..+++.+++.++++.
T Consensus       361 -~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~  396 (398)
T 3oti_A          361 -RLIGDESLRTAAREVREEM-VALPTPAETVRRIVERI  396 (398)
T ss_dssp             -HHHHCHHHHHHHHHHHHHH-HTSCCHHHHHHHHHHHH
T ss_pred             -HHHcCHHHHHHHHHHHHHH-HhCCCHHHHHHHHHHHh
Confidence             8889999999998888774 46689999998887764

>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}

Probab=99.75  E-value=9.2e-18  Score=151.04  Aligned_cols=275  Identities=10%  Similarity=0.070  Sum_probs=172.7

Q ss_pred             chhHHHhhhcccEEEEcCchhhhHH-HHHhhcCCCccccceeEEeeeeccc--ccch-hhhccc-cccceeeeeccchhh
Q 017085           48 GQETINTALKADLIVLNTAVAGKWL-DAVLKEDVPRVLPNVLWWIHEMRGH--YFKL-DYVKHL-PLVAGAMIDSHVTAE  122 (377)
Q Consensus        48 ~~~~~~~~~~~Div~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~h~~~~~--~~~~-~~~~~~-~~~~~~~~~s~~~~~  122 (377)
                      .+..++++.+||+|++++.....+. .++...++     |++....+..+.  .+.. ..+..+ ..++.+++.++...+
T Consensus        85 ~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~I-----Pv~h~eaglrs~~~~~pee~nR~~~~~~a~~~~~~te~~~~  159 (385)
T 4hwg_A           85 KVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKI-----PIFHMEAGNRCFDQRVPEEINRKIIDHISDVNITLTEHARR  159 (385)
T ss_dssp             HHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTC-----CEEEESCCCCCSCTTSTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred             HHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCC-----CEEEEeCCCccccccCcHHHHHHHHHhhhceeecCCHHHHH
Confidence            3456667899999999986544343 22223333     544333333221  1111 122233 355678888888877


Q ss_pred             HhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEecccc---ccchhHHHHHHH
Q 017085          123 YWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS---RGKGQDLFLHSF  199 (377)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~---~~Kg~~~ll~a~  199 (377)
                      ++.     ..|++++++.++.|+.-........     ...+..+++++|+++++++++..||..   ..|+++.+++++
T Consensus       160 ~l~-----~~G~~~~~I~vtGnp~~D~~~~~~~-----~~~~~~~~~~lgl~~~~~iLvt~hr~e~~~~~~~l~~ll~al  229 (385)
T 4hwg_A          160 YLI-----AEGLPAELTFKSGSHMPEVLDRFMP-----KILKSDILDKLSLTPKQYFLISSHREENVDVKNNLKELLNSL  229 (385)
T ss_dssp             HHH-----HTTCCGGGEEECCCSHHHHHHHHHH-----HHHHCCHHHHTTCCTTSEEEEEECCC-----CHHHHHHHHHH
T ss_pred             HHH-----HcCCCcCcEEEECCchHHHHHHhhh-----hcchhHHHHHcCCCcCCEEEEEeCCchhcCcHHHHHHHHHHH
Confidence            776     5688888999999865322211111     112456788999987777777777643   347889999999


Q ss_pred             HHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhc-C-C--CCcEEEecCc--CCHHHHHHhcCEEEecCCC
Q 017085          200 YESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK-K-I--QDRVHFVNKT--LTVAPYLAAIDVLVQNSQA  273 (377)
Q Consensus       200 ~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~-~-~--~~~v~~~g~~--~~~~~~~~~adv~l~ps~~  273 (377)
                      ..+.+       ++ ++.+++....     .    +++.++++ + +  .++|.+.++.  .++..+|+.||+++.+|  
T Consensus       230 ~~l~~-------~~-~~~vv~p~~p-----~----~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~S--  290 (385)
T 4hwg_A          230 QMLIK-------EY-NFLIIFSTHP-----R----TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDS--  290 (385)
T ss_dssp             HHHHH-------HH-CCEEEEEECH-----H----HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECC--
T ss_pred             HHHHh-------cC-CeEEEEECCh-----H----HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECC--
Confidence            87754       22 5676665431     2    33444444 3 2  3589998765  46889999999999655  


Q ss_pred             CCCccchHHHHHHHcCCcEEEeCC-CCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhc
Q 017085          274 WGECFGRITIEAMAFQLPVLGTAA-GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIF  352 (377)
Q Consensus       274 ~~e~~~~~~~Ea~a~g~PvI~s~~-~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f  352 (377)
                           |....||+++|+|+|+.+. ++.+|.+..| ++.++.. |  .+++++++.++++|++.+..|+.++..++.+..
T Consensus       291 -----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv~~-d--~~~i~~ai~~ll~d~~~~~~m~~~~~~~~g~g~  361 (385)
T 4hwg_A          291 -----GTITEEASILNLPALNIREAHERPEGMDAG-TLIMSGF-K--AERVLQAVKTITEEHDNNKRTQGLVPDYNEAGL  361 (385)
T ss_dssp             -----TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEECCS-S--HHHHHHHHHHHHTTCBTTBCCSCCCHHHHTCCC
T ss_pred             -----ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEcCC-C--HHHHHHHHHHHHhChHHHHHhhccCCCCCCCCh
Confidence                 3457999999999999864 3466777655 6676653 4  899999999999998776666554443201223


Q ss_pred             CHHHHHHHHHHHH
Q 017085          353 QEHHMAERIAVVL  365 (377)
Q Consensus       353 ~~~~~~~~~~~~~  365 (377)
                      +.+++++.+.+.+
T Consensus       362 aa~rI~~~l~~~~  374 (385)
T 4hwg_A          362 VSKKILRIVLSYV  374 (385)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            4455555444443

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*

Probab=99.75  E-value=3.7e-17  Score=149.86  Aligned_cols=164  Identities=13%  Similarity=0.102  Sum_probs=114.0

Q ss_pred             CCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEE-EecCCCcccHHHHHHHHHHHhcCCCCcEEEecC
Q 017085          175 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK  253 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i-~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~  253 (377)
                      +...++++.|+.....+ + +++.+.   +.+.+     .++++++ +|.+..     .+.+.      .+++++.+.++
T Consensus       246 ~~~~v~v~~Gs~~~~~~-~-~~~~~~---~al~~-----~~~~~v~~~g~~~~-----~~~l~------~~~~~v~~~~~  304 (415)
T 3rsc_A          246 DLPVVLVSLGTTFNDRP-G-FFRDCA---RAFDG-----QPWHVVMTLGGQVD-----PAALG------DLPPNVEAHRW  304 (415)
T ss_dssp             CCCEEEEECTTTSCCCH-H-HHHHHH---HHHTT-----SSCEEEEECTTTSC-----GGGGC------CCCTTEEEESC
T ss_pred             CCCEEEEECCCCCCChH-H-HHHHHH---HHHhc-----CCcEEEEEeCCCCC-----hHHhc------CCCCcEEEEec
Confidence            45677888898754432 2 222222   12222     2377777 454421     11111      34679999999


Q ss_pred             cCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe----CCCCcccceecCcceeeecCCCCChhHHHHHHHH
Q 017085          254 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT----AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVK  329 (377)
Q Consensus       254 ~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s----~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~  329 (377)
                      .++. ++|..||++|..+      ...+++|||++|+|+|+.    +.....+.+.+.+.|..+...+.+.++++++|.+
T Consensus       305 ~~~~-~ll~~ad~~v~~~------G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~  377 (415)
T 3rsc_A          305 VPHV-KVLEQATVCVTHG------GMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGA  377 (415)
T ss_dssp             CCHH-HHHHHEEEEEESC------CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHH
T ss_pred             CCHH-HHHhhCCEEEECC------cHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHH
Confidence            8666 9999999999644      246889999999999995    4444666677777888887653348999999999


Q ss_pred             HhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 017085          330 LATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE  367 (377)
Q Consensus       330 l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~  367 (377)
                      +++|++.++++++.+.+. .+...++.+++.+++++.+
T Consensus       378 ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~  414 (415)
T 3rsc_A          378 VAADPALLARVEAMRGHV-RRAGGAARAADAVEAYLAR  414 (415)
T ss_dssp             HHTCHHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHH
T ss_pred             HHcCHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhhc
Confidence            999999888888877764 4557888888888777653

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}

Probab=99.71  E-value=1.6e-15  Score=137.42  Aligned_cols=159  Identities=12%  Similarity=0.087  Sum_probs=115.6

Q ss_pred             CCCeEEEEecccccc-------chhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCc
Q 017085          175 NEDLLFAIINSVSRG-------KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR  247 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~-------Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~  247 (377)
                      +...+++++|++...       +.++.+++++..            .++++++++++     ...+.+..      ++++
T Consensus       209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~------------~~~~~~~~~g~-----~~~~~l~~------~~~~  265 (384)
T 2p6p_A          209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVR------------WDVELIVAAPD-----TVAEALRA------EVPQ  265 (384)
T ss_dssp             SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHT------------TTCEEEEECCH-----HHHHHHHH------HCTT
T ss_pred             CCCEEEEECCCCCccccccccHHHHHHHHHHHhc------------CCcEEEEEeCC-----CCHHhhCC------CCCc
Confidence            345788889998765       456666666542            36788887654     22333322      2568


Q ss_pred             EEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC----cccceecCcceeeecCCCCChhHH
Q 017085          248 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPL  323 (377)
Q Consensus       248 v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~----~~e~~~~~~~g~~~~~~~~~~~~l  323 (377)
                      |.+ |+. +..++|..||++|..+      .+++++|||++|+|+|+....+    ..+.+.+.+.|+.++..+.+.+++
T Consensus       266 v~~-~~~-~~~~~l~~~d~~v~~~------G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l  337 (384)
T 2p6p_A          266 ARV-GWT-PLDVVAPTCDLLVHHA------GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAI  337 (384)
T ss_dssp             SEE-ECC-CHHHHGGGCSEEEECS------CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCCHHHH
T ss_pred             eEE-cCC-CHHHHHhhCCEEEeCC------cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCCHHHH
Confidence            999 987 5688999999999654      3568999999999999997643    566666667899887653348999


Q ss_pred             HHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017085          324 AKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL  365 (377)
Q Consensus       324 a~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~  365 (377)
                      +++|.++++|++.++++++.+.+.. +.-..+.+++.++++.
T Consensus       338 ~~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~  378 (384)
T 2p6p_A          338 ADSCQELQAKDTYARRAQDLSREIS-GMPLPATVVTALEQLA  378 (384)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHh
Confidence            9999999999998888888776643 4456666666655554

>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*

Probab=99.55  E-value=2.5e-13  Score=128.62  Aligned_cols=253  Identities=13%  Similarity=0.032  Sum_probs=170.0

Q ss_pred             ccceeeeeccchhhHhhhhhhh-hhhccCCCeEEEEcCChhhhH----HHhh--------------------------hh
Q 017085          109 LVAGAMIDSHVTAEYWKNRTRE-RLRIKMPDTYVVHLGNSKELM----EVAE--------------------------DN  157 (377)
Q Consensus       109 ~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~vi~ngi~~~~~----~~~~--------------------------~~  157 (377)
                      .++.+-++|....+.+++.... .+..-+.++.-|-|||++..+    .|..                          ..
T Consensus       413 ~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d  492 (796)
T 1l5w_A          413 GGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADD  492 (796)
T ss_dssp             HSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGC
T ss_pred             hcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCC
Confidence            4466777777777666542211 233345689999999988777    2211                          00


Q ss_pred             --------hhhhhhHHH----HHHHhCCC--CCCeEEEEeccccccchhHH-HHHHHHHHHHHHhhhcccCCCeEEEEEe
Q 017085          158 --------VAKRVLREH----VRESLGVR--NEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEKKLEVPSVHAVIIG  222 (377)
Q Consensus       158 --------~~~~~~~~~----~r~~~~~~--~~~~~i~~~G~~~~~Kg~~~-ll~a~~~l~~~l~~~~~~~~~~~l~i~G  222 (377)
                              ..+...|..    +++.+|++  ++.+.++++.|+..+||+++ ++..+..+.+.+.+......++++++.|
T Consensus       493 ~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~G  572 (796)
T 1l5w_A          493 AKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGA  572 (796)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEe
Confidence                    112223344    46777764  56799999999999999999 8998887764433321112469999999


Q ss_pred             cCCCcccHHHHHHHHHHHhc--------CCCC--cEEEecC-c-CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCC
Q 017085          223 SDMNAQTKFESELRNYVMQK--------KIQD--RVHFVNK-T-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQL  290 (377)
Q Consensus       223 ~~~~~~~~~~~~l~~~~~~~--------~~~~--~v~~~g~-~-~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~  290 (377)
                      .+.+... ..+.+.+++...        .+++  +|.|+.. . .-...++.+||++++||....|++|++-+=+|..|+
T Consensus       573 KA~P~y~-~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGa  651 (796)
T 1l5w_A          573 KAAPGYY-LAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGA  651 (796)
T ss_dssp             CCCTTCH-HHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTC
T ss_pred             cCChhHH-HHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCC
Confidence            9887653 344444444333        3566  7888864 3 334577899999999999889999999999999999


Q ss_pred             cEEEeCCCCcccceec--CcceeeecCCCCChhHHHHHH-------HHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 017085          291 PVLGTAAGGTTEIVVN--GTTGLLHPVGKEGITPLAKNI-------VKLATHVERRLTMGKRGYERVKEIFQEHHMAERI  361 (377)
Q Consensus       291 PvI~s~~~~~~e~~~~--~~~g~~~~~~~~~~~~la~~i-------~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~  361 (377)
                      +.|++--|...|+.+.  .+|||++.. +  ++++.+.-       .-.-.+++ .+++-.++   ....|||+.- .++
T Consensus       652 L~iGtLDGanvEi~e~vG~~NgF~FG~-~--~~ev~~l~~~~y~a~~~y~~~~~-~~~vvd~~---~~g~fs~~~~-~~y  723 (796)
T 1l5w_A          652 LTVGTLDGANVEIAEKVGEENIFIFGH-T--VEQVKAILAKGYDPVKWRKKDKV-LDAVLKEL---ESGKYSDGDK-HAF  723 (796)
T ss_dssp             EEEECSCTTHHHHHHHHCGGGSEECSC-C--HHHHHHHHHHCCCHHHHHHHCHH-HHHHHHHH---HHTTTTTTCT-TTT
T ss_pred             eeecCcCCeeeehhhccCCCcEEEecC-C--HHHHHHHHHcccCHHHHhhcCHH-HHHHHHHH---HcCCCCCCcH-HHH
Confidence            9999988888887654  469999987 3  66665322       22223553 33443333   3467999875 779


Q ss_pred             HHHHHHHHh
Q 017085          362 AVVLKEVLK  370 (377)
Q Consensus       362 ~~~~~~~~~  370 (377)
                      ..+|..++.
T Consensus       724 ~~Ly~~L~~  732 (796)
T 1l5w_A          724 DQMLHSIGK  732 (796)
T ss_dssp             HHHHHHTST
T ss_pred             HHHHHHHhc
Confidence            999988764

>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}

Probab=99.54  E-value=1.4e-13  Score=130.33  Aligned_cols=256  Identities=14%  Similarity=0.078  Sum_probs=168.8

Q ss_pred             ccceeeeeccchhhHhhhhhhh-hhhccCCCeEEEEcCChhhhH----HHhh---------------------------h
Q 017085          109 LVAGAMIDSHVTAEYWKNRTRE-RLRIKMPDTYVVHLGNSKELM----EVAE---------------------------D  156 (377)
Q Consensus       109 ~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~vi~ngi~~~~~----~~~~---------------------------~  156 (377)
                      .++.+-++|....+.+++.... .+..-+.++.-|-|||++..+    .|..                           .
T Consensus       402 ~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~  481 (796)
T 2c4m_A          402 AAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYAD  481 (796)
T ss_dssp             HCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGG
T ss_pred             hcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCC
Confidence            4566777777777766643211 223345689999999987665    1210                           0


Q ss_pred             h--------hhhhhhHHH----HHHHhCC--CCCCeEEEEeccccccchhHH-HHHHHHHHHHHHhhhcccCCCeEEEEE
Q 017085          157 N--------VAKRVLREH----VRESLGV--RNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEKKLEVPSVHAVII  221 (377)
Q Consensus       157 ~--------~~~~~~~~~----~r~~~~~--~~~~~~i~~~G~~~~~Kg~~~-ll~a~~~l~~~l~~~~~~~~~~~l~i~  221 (377)
                      .        ..+...|..    +++.+|+  +++.+.++++.|+..+||+++ ++..+..+.+.+.+......++++++.
T Consensus       482 d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~  561 (796)
T 2c4m_A          482 DKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFG  561 (796)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEE
Confidence            0        112222334    4667776  456799999999999999999 899888776433321111136999999


Q ss_pred             ecCCCcccHHHHHHHHHHHhc--------CCCC--cEEEecC-c-CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcC
Q 017085          222 GSDMNAQTKFESELRNYVMQK--------KIQD--RVHFVNK-T-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQ  289 (377)
Q Consensus       222 G~~~~~~~~~~~~l~~~~~~~--------~~~~--~v~~~g~-~-~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g  289 (377)
                      |.+.+... ..+.+.+++...        .+++  +|.|+.. . +-...++.+||++++||....|++|++-+=+|..|
T Consensus       562 GKA~P~y~-~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NG  640 (796)
T 2c4m_A          562 AKAAPGYV-RAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNG  640 (796)
T ss_dssp             CCCCTTCH-HHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTT
T ss_pred             ecCCHhHH-HHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcC
Confidence            99887653 344444444333        4567  7888864 3 33457789999999999988999999999999999


Q ss_pred             CcEEEeCCCCcccceec--CcceeeecCCCCChhHHHHH---HHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 017085          290 LPVLGTAAGGTTEIVVN--GTTGLLHPVGKEGITPLAKN---IVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVV  364 (377)
Q Consensus       290 ~PvI~s~~~~~~e~~~~--~~~g~~~~~~~~~~~~la~~---i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~  364 (377)
                      ++.|++--|...|+.+.  .+|||++.....++.++...   ..-.-.+++ .+++-.++   ....|||+.- .++..+
T Consensus       641 aL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~y~a~~~y~~~~~-~~~vvd~~---~~g~fs~~~~-~~y~~L  715 (796)
T 2c4m_A          641 ALTLGTMDGANVEIVDSVGEENAYIFGARVEELPALRESYKPYELYETVPG-LKRALDAL---DNGTLNDNNS-GLFYDL  715 (796)
T ss_dssp             CEEEEESSTHHHHHHHHHCGGGSEEESCCTTTHHHHHHTCCHHHHHHHSTT-HHHHHHTT---TSSSSCCTTC-CHHHHH
T ss_pred             CeEEeccCCeEeehhhhcCCCcEEEecCchhhHHHHHHhhChHHHhhcCHH-HHHHHHHH---HcCCCCCCCH-HHHHHH
Confidence            99999987887777654  46999998743225555543   111122332 22222222   2356898776 779999


Q ss_pred             HHHHHh
Q 017085          365 LKEVLK  370 (377)
Q Consensus       365 ~~~~~~  370 (377)
                      |..++.
T Consensus       716 y~~L~~  721 (796)
T 2c4m_A          716 KHSLIH  721 (796)
T ss_dssp             HHHHHS
T ss_pred             HHHHHh
Confidence            999874

>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A

Probab=99.53  E-value=2.4e-14  Score=132.84  Aligned_cols=273  Identities=10%  Similarity=0.017  Sum_probs=168.1

Q ss_pred             chhHHHhhhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccchhhhccccccceeeeeccchhhHhhhh
Q 017085           48 GQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNR  127 (377)
Q Consensus        48 ~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~  127 (377)
                      .....++..++||++--+..+......+.. ..|   .|+-.+.-+.. .      -.-++.+|++++.....-.  .  
T Consensus       340 ~ia~~Ir~d~IDILVdL~g~t~~~~i~~aa-~Rp---APVQvs~lGyp-~------TTGl~~iDY~i~D~~~~~~--~--  404 (631)
T 3q3e_A          340 FIRSVCESNGAAIFYMPSIGMDMTTIFASN-TRL---APIQAIALGHP-A------TTHSDFIEYVIVEDDYVGS--E--  404 (631)
T ss_dssp             HHHHHHHHHTCSEEEESCCSSSHHHHHHTT-SCC---SSEEEEECSSC-S------CCCCTTCCEEEEEGGGCCC--G--
T ss_pred             HHHHHHHhcCCCEEEECCCCCCchhHHHHh-CCC---chheEeccCCC-c------ccCcccCCEEEeCCCCCCc--c--
Confidence            445777889999998854432222111111 111   23322222211 1      1123567777776643211  1  


Q ss_pred             hhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCC--CeEEEEeccccccchhHHHHHHHHHHHHH
Q 017085          128 TRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNE--DLLFAIINSVSRGKGQDLFLHSFYESLEL  205 (377)
Q Consensus       128 ~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~  205 (377)
                         .  .-.+++..+|+..-.  +.+....        ..|..++++.+  .++|+.+++  ..|..+.++++|.+++++
T Consensus       405 ---~--~ysEklirLP~~~~~--~~p~~~~--------p~r~~~~lp~~~G~v~Fg~fn~--~~Ki~p~~l~~WarIL~~  467 (631)
T 3q3e_A          405 ---E--CFSETLLRLPKDALP--YVPSALA--------PEKVDYLLRENPEVVNIGIAST--TMKLNPYFLEALKAIRDR  467 (631)
T ss_dssp             ---G--GCSSEEEEECTTSSC--CCCCTTC--------CSSCCCCCCSCCSEEEEEEEEC--STTCCHHHHHHHHHHHHH
T ss_pred             ---c--CceeeEEECCCCccc--cCCcccC--------CccccccCCcCCCeEEEEECCc--cccCCHHHHHHHHHHHHh
Confidence               1  123677888863211  1111100        01345677664  677877776  469999999999998773


Q ss_pred             HhhhcccCCCeEEE--EEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchH
Q 017085          206 IKEKKLEVPSVHAV--IIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRI  281 (377)
Q Consensus       206 l~~~~~~~~~~~l~--i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~  281 (377)
                             .|+..++  ++|.+..    ....+.+.+.+.|+.+++.|.|..  .+..+.|+.+|++|.|+.  + +.|++
T Consensus       468 -------vP~s~L~l~~~g~~~g----~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfp--y-~GgtT  533 (631)
T 3q3e_A          468 -------AKVKVHFHFALGQSNG----ITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFP--F-GNTNG  533 (631)
T ss_dssp             -------CSSEEEEEEEESSCCG----GGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSS--S-CCSHH
T ss_pred             -------CCCcEEEEEecCCCch----hhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCc--c-cCChH
Confidence                   3666654  3564321    223333445667888899999986  567788999999999985  4 55999


Q ss_pred             HHHHHHcCCcEEEeCCCCccccee------cCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHH--hcC
Q 017085          282 TIEAMAFQLPVLGTAAGGTTEIVV------NGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKE--IFQ  353 (377)
Q Consensus       282 ~~Ea~a~g~PvI~s~~~~~~e~~~------~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~--~f~  353 (377)
                      .+|||+||+|||+.......+.+.      -|-.++++.. +  .+++++...++.+|++.+.+++++.++....  -|+
T Consensus       534 tlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~-d--~eeYv~~Av~La~D~~~l~~LR~~Lr~~~~~spLFd  610 (631)
T 3q3e_A          534 IIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIAN-T--VDEYVERAVRLAENHQERLELRRYIIENNGLNTLFT  610 (631)
T ss_dssp             HHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEES-S--HHHHHHHHHHHHHCHHHHHHHHHHHHHSCCHHHHTC
T ss_pred             HHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecC-C--HHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhCCCcc
Confidence            999999999999976555544432      1223332222 2  8999999999999999999999998876433  344


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q 017085          354 EHHMAERIAVVLKEVLKK  371 (377)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~  371 (377)
                        ...+++++.|++++.+
T Consensus       611 --~~~~~~e~~ye~~~~~  626 (631)
T 3q3e_A          611 --GDPRPMGQVFLEKLNA  626 (631)
T ss_dssp             --SCCTHHHHHHHHHHHH
T ss_pred             --hhHHHHHHHHHHHHHH
Confidence              4556666666665543

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*

Probab=99.46  E-value=1.8e-12  Score=117.99  Aligned_cols=158  Identities=10%  Similarity=0.037  Sum_probs=104.7

Q ss_pred             CCCeEEEEecccc-ccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecC
Q 017085          175 NEDLLFAIINSVS-RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK  253 (377)
Q Consensus       175 ~~~~~i~~~G~~~-~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~  253 (377)
                      ..++++++.|++. +.+....+++++..            .++++++.++.....            ..+.++++.+.++
T Consensus       220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~------------~~~~vv~~~g~~~~~------------~~~~~~~v~~~~~  275 (404)
T 3h4t_A          220 GSPPVYVGFGSGPAPAEAARVAIEAVRA------------QGRRVVLSSGWAGLG------------RIDEGDDCLVVGE  275 (404)
T ss_dssp             SSCCEEECCTTSCCCTTHHHHHHHHHHH------------TTCCEEEECTTTTCC------------CSSCCTTEEEESS
T ss_pred             CCCeEEEECCCCCCcHHHHHHHHHHHHh------------CCCEEEEEeCCcccc------------cccCCCCEEEecC
Confidence            4456777889887 56666666666653            356777765532111            1234679999999


Q ss_pred             cCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC----cccceecCcceeeecCCCCChhHHHHHHHH
Q 017085          254 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLAKNIVK  329 (377)
Q Consensus       254 ~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~----~~e~~~~~~~g~~~~~~~~~~~~la~~i~~  329 (377)
                      .+ ..++|..||++|..+      ...++.||+++|+|+|+....+    ..+.+.+.+.|..+...+.+.+++++++.+
T Consensus       276 ~~-~~~ll~~~d~~v~~g------G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~  348 (404)
T 3h4t_A          276 VN-HQVLFGRVAAVVHHG------GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALAT  348 (404)
T ss_dssp             CC-HHHHGGGSSEEEECC------CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHH
T ss_pred             CC-HHHHHhhCcEEEECC------cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHH
Confidence            74 488999999999533      3478999999999999986543    233455556888877654458999999999


Q ss_pred             HhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Q 017085          330 LATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK  370 (377)
Q Consensus       330 l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  370 (377)
                      +++ ++.++++.+.+..     +.- .-+++..+.+++++.
T Consensus       349 ll~-~~~~~~~~~~~~~-----~~~-~~~~~~~~~i~~~~~  382 (404)
T 3h4t_A          349 ALT-PGIRARAAAVAGT-----IRT-DGTTVAAKLLLEAIS  382 (404)
T ss_dssp             HTS-HHHHHHHHHHHTT-----CCC-CHHHHHHHHHHHHHH
T ss_pred             HhC-HHHHHHHHHHHHH-----Hhh-hHHHHHHHHHHHHHh
Confidence            998 7766655554433     322 334444444444443

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}

Probab=99.45  E-value=5.2e-12  Score=115.86  Aligned_cols=162  Identities=14%  Similarity=0.148  Sum_probs=108.3

Q ss_pred             CCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEE-EEecCCCcccHHHHHHHHHHHhcCCCCcEEEecC
Q 017085          175 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAV-IIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK  253 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~-i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~  253 (377)
                      +...++++.|+.. ....+.+.+++.    .+.+     .+++++ ++|.+...     +.+    .  .+++++.+.++
T Consensus       254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~----al~~-----~~~~~~~~~g~~~~~-----~~~----~--~~~~~v~~~~~  312 (424)
T 2iya_A          254 GRPVLLIALGSAF-TDHLDFYRTCLS----AVDG-----LDWHVVLSVGRFVDP-----ADL----G--EVPPNVEVHQW  312 (424)
T ss_dssp             SCCEEEEECCSSS-CCCHHHHHHHHH----HHTT-----CSSEEEEECCTTSCG-----GGG----C--SCCTTEEEESS
T ss_pred             CCCEEEEEcCCCC-cchHHHHHHHHH----HHhc-----CCcEEEEEECCcCCh-----HHh----c--cCCCCeEEecC
Confidence            3457777889876 333333333333    2221     567775 46765321     111    1  24678999999


Q ss_pred             cCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC----CcccceecCcceeeecCCCCChhHHHHHHHH
Q 017085          254 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVNGTTGLLHPVGKEGITPLAKNIVK  329 (377)
Q Consensus       254 ~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~----~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~  329 (377)
                      ..+. ++|..||++|..+      ..++++||+++|+|+|+....    ...+.+.+.+.|+.++..+.+.++++++|.+
T Consensus       313 ~~~~-~~l~~~d~~v~~~------G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~  385 (424)
T 2iya_A          313 VPQL-DILTKASAFITHA------GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLA  385 (424)
T ss_dssp             CCHH-HHHTTCSEEEECC------CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHH
T ss_pred             CCHH-HHHhhCCEEEECC------chhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHH
Confidence            8766 8999999988532      357999999999999999754    2445565667888887553338999999999


Q ss_pred             HhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017085          330 LATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL  365 (377)
Q Consensus       330 l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~  365 (377)
                      +++|++.++++++.+.+. .+....+..++.+++++
T Consensus       386 ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~  420 (424)
T 2iya_A          386 VASDPGVAERLAAVRQEI-REAGGARAAADILEGIL  420 (424)
T ss_dssp             HHHCHHHHHHHHHHHHHH-HTSCHHHHHHHHHHHHH
T ss_pred             HHcCHHHHHHHHHHHHHH-HhcCcHHHHHHHHHHHH
Confidence            999998877777766553 34455666666665554

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.42  E-value=1.9e-11  Score=111.75  Aligned_cols=158  Identities=8%  Similarity=0.018  Sum_probs=109.1

Q ss_pred             CCeEEEEeccc-cccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEE-ecCCCcccHHHHHHHHHHHhcCCCCcEEEecC
Q 017085          176 EDLLFAIINSV-SRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFVNK  253 (377)
Q Consensus       176 ~~~~i~~~G~~-~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~-G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~  253 (377)
                      ...++++.|++ .+.+..+.++++++.+            +.+++++ |.+...             ...+++++.+.++
T Consensus       238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~------------~~~~v~~~g~~~~~-------------~~~~~~~v~~~~~  292 (415)
T 1iir_A          238 PPPVYLGFGSLGAPADAVRVAIDAIRAH------------GRRVILSRGWADLV-------------LPDDGADCFAIGE  292 (415)
T ss_dssp             SCCEEEECC---CCHHHHHHHHHHHHHT------------TCCEEECTTCTTCC-------------CSSCGGGEEECSS
T ss_pred             CCeEEEeCCCCCCcHHHHHHHHHHHHHC------------CCeEEEEeCCCccc-------------ccCCCCCEEEeCc
Confidence            35678888998 4777777787777642            3566655 654210             0234568999999


Q ss_pred             cCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC----cccceecCcceeeecCCCCChhHHHHHHHH
Q 017085          254 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLAKNIVK  329 (377)
Q Consensus       254 ~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~----~~e~~~~~~~g~~~~~~~~~~~~la~~i~~  329 (377)
                      .++ .++|..||++|..+      ..++++|||++|+|+|+....+    ..+.+.+.+.|+.++..+.+.++++++|.+
T Consensus       293 ~~~-~~~l~~~d~~v~~~------G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~  365 (415)
T 1iir_A          293 VNH-QVLFGRVAAVIHHG------GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALAT  365 (415)
T ss_dssp             CCH-HHHGGGSSEEEECC------CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHH
T ss_pred             CCh-HHHHhhCCEEEeCC------ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHH
Confidence            865 57889999999533      3479999999999999986543    455566667888887654348999999999


Q ss_pred             HhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Q 017085          330 LATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKK  371 (377)
Q Consensus       330 l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  371 (377)
                      + +|++.++++.+.+.+     +....-++++.+.+++++..
T Consensus       366 l-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~~  401 (415)
T 1iir_A          366 A-LTPETHARATAVAGT-----IRTDGAAVAARLLLDAVSRE  401 (415)
T ss_dssp             H-TSHHHHHHHHHHHHH-----SCSCHHHHHHHHHHHHHHTC
T ss_pred             H-cCHHHHHHHHHHHHH-----HhhcChHHHHHHHHHHHHhc
Confidence            9 998766665554433     44455666666666666543

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*

Probab=99.40  E-value=8e-12  Score=113.66  Aligned_cols=158  Identities=13%  Similarity=0.122  Sum_probs=101.2

Q ss_pred             CCCeEEEEeccccccch-hHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecC
Q 017085          175 NEDLLFAIINSVSRGKG-QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK  253 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~Kg-~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~  253 (377)
                      +...+++..|++...++ .+.+.+++.    .+.+     .+..+++.+.+.+..           ....+++++.+.++
T Consensus       236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~----~l~~-----~~~~~v~~~~~~~~~-----------~~~~~~~~v~~~~~  295 (400)
T 4amg_A          236 GRRRIAVTLGSIDALSGGIAKLAPLFS----EVAD-----VDAEFVLTLGGGDLA-----------LLGELPANVRVVEW  295 (400)
T ss_dssp             TCCEEEECCCSCC--CCSSSTTHHHHH----HGGG-----SSSEEEEECCTTCCC-----------CCCCCCTTEEEECC
T ss_pred             CCcEEEEeCCcccccCccHHHHHHHHH----Hhhc-----cCceEEEEecCcccc-----------ccccCCCCEEEEee
Confidence            34566777788755443 333433333    2222     567777766543221           11245789999998


Q ss_pred             cCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC----CcccceecCcceeeecCCCCChhHHHHHHHH
Q 017085          254 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVNGTTGLLHPVGKEGITPLAKNIVK  329 (377)
Q Consensus       254 ~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~----~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~  329 (377)
                      . ...++|..+|+++.      .+..+++.|||++|+|+|+....    .+.+.+.+.+.|...+..    +..+++|.+
T Consensus       296 ~-p~~~lL~~~~~~v~------h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~----~~~~~al~~  364 (400)
T 4amg_A          296 I-PLGALLETCDAIIH------HGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAG----SLGAEQCRR  364 (400)
T ss_dssp             C-CHHHHHTTCSEEEE------CCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTT----TCSHHHHHH
T ss_pred             c-CHHHHhhhhhheec------cCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCC----CchHHHHHH
Confidence            7 46789999999883      33467899999999999986443    345556555677777653    456789999


Q ss_pred             HhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 017085          330 LATHVERRLTMGKRGYERVKEIFQEHHMAERIAVV  364 (377)
Q Consensus       330 l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~  364 (377)
                      +++|++.+++..+-+.+ +.+.=+....++.++++
T Consensus       365 lL~d~~~r~~a~~l~~~-~~~~~~~~~~a~~le~l  398 (400)
T 4amg_A          365 LLDDAGLREAALRVRQE-MSEMPPPAETAAXLVAL  398 (400)
T ss_dssp             HHHCHHHHHHHHHHHHH-HHTSCCHHHHHHHHHHH
T ss_pred             HHcCHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHh
Confidence            99999877665554444 44445666666666553

>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}

Probab=99.39  E-value=3.2e-12  Score=101.63  Aligned_cols=133  Identities=6%  Similarity=0.037  Sum_probs=98.5

Q ss_pred             CCCeEEEEecccc---ccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEe
Q 017085          175 NEDLLFAIINSVS---RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFV  251 (377)
Q Consensus       175 ~~~~~i~~~G~~~---~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~  251 (377)
                      +..++++++|++.   +.|.+..+++++..            .++++++++++...              ..++++|++.
T Consensus        20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~------------~~~~~~~~~g~~~~--------------~~~~~~v~~~   73 (170)
T 2o6l_A           20 ENGVVVFSLGSMVSNMTEERANVIASALAQ------------IPQKVLWRFDGNKP--------------DTLGLNTRLY   73 (170)
T ss_dssp             TTCEEEEECCSCCTTCCHHHHHHHHHHHTT------------SSSEEEEECCSSCC--------------TTCCTTEEEE
T ss_pred             CCCEEEEECCCCcccCCHHHHHHHHHHHHh------------CCCeEEEEECCcCc--------------ccCCCcEEEe
Confidence            3467888899985   56777777777642            24688887765311              0246789999


Q ss_pred             cCcCCHHHHH--HhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC----CcccceecCcceeeecCCCCChhHHHH
Q 017085          252 NKTLTVAPYL--AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVNGTTGLLHPVGKEGITPLAK  325 (377)
Q Consensus       252 g~~~~~~~~~--~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~----~~~e~~~~~~~g~~~~~~~~~~~~la~  325 (377)
                      |+..+ .+++  ..||+++..+      .+++++|||++|+|+|+....    +..+.+.+.+.|+.++..+.+.+++++
T Consensus        74 ~~~~~-~~~l~~~~ad~~I~~~------G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~  146 (170)
T 2o6l_A           74 KWIPQ-NDLLGHPKTRAFITHG------GANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLN  146 (170)
T ss_dssp             SSCCH-HHHHTSTTEEEEEECC------CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHH
T ss_pred             cCCCH-HHHhcCCCcCEEEEcC------CccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHH
Confidence            99855 5667  8999999533      368999999999999999764    346667777899998876334899999


Q ss_pred             HHHHHhhCHHHHHHH
Q 017085          326 NIVKLATHVERRLTM  340 (377)
Q Consensus       326 ~i~~l~~~~~~~~~~  340 (377)
                      +|.++++|++.++++
T Consensus       147 ~i~~ll~~~~~~~~a  161 (170)
T 2o6l_A          147 ALKRVINDPSYKENV  161 (170)
T ss_dssp             HHHHHHHCHHHHHHH
T ss_pred             HHHHHHcCHHHHHHH
Confidence            999999998744433

>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...

Probab=99.35  E-value=2.3e-11  Score=115.80  Aligned_cols=252  Identities=13%  Similarity=0.082  Sum_probs=163.7

Q ss_pred             ccceeeeeccchhhHhhhhh-hhhhhccCCCeEEEEcCChhhhH----HHhhh---------------------------
Q 017085          109 LVAGAMIDSHVTAEYWKNRT-RERLRIKMPDTYVVHLGNSKELM----EVAED---------------------------  156 (377)
Q Consensus       109 ~~~~~~~~s~~~~~~~~~~~-~~~~~~~~~~~~vi~ngi~~~~~----~~~~~---------------------------  156 (377)
                      .++.+-++|....+..++.. ...+..-++++.-|-|||++..+    .+...                           
T Consensus       437 ~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d  516 (824)
T 2gj4_A          437 GSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDD  516 (824)
T ss_dssp             TCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTC
T ss_pred             hcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhccch
Confidence            45667777777666665332 22233446789999999976655    12110                           


Q ss_pred             -hh------hhhhhHHH----HHHHhCCC--CCCeEEEEeccccccchhHHH-HHHHHHHHHHHhhhcccCCCeEEEEEe
Q 017085          157 -NV------AKRVLREH----VRESLGVR--NEDLLFAIINSVSRGKGQDLF-LHSFYESLELIKEKKLEVPSVHAVIIG  222 (377)
Q Consensus       157 -~~------~~~~~~~~----~r~~~~~~--~~~~~i~~~G~~~~~Kg~~~l-l~a~~~l~~~l~~~~~~~~~~~l~i~G  222 (377)
                       ..      .+...|..    +++..|++  ++.+.++++.|+..+||++++ +..+..+.+.+.+......++++++.|
T Consensus       517 ~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~G  596 (824)
T 2gj4_A          517 EAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGG  596 (824)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEE
Confidence             00      11222333    55667764  567999999999999999997 888887654333211001168999999


Q ss_pred             cCCCcccHHHHHHHHHHHhc--------CCCC--cEEEecC-c-CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCC
Q 017085          223 SDMNAQTKFESELRNYVMQK--------KIQD--RVHFVNK-T-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQL  290 (377)
Q Consensus       223 ~~~~~~~~~~~~l~~~~~~~--------~~~~--~v~~~g~-~-~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~  290 (377)
                      .+.+... ..+.+.+++.++        .+++  +|.|+.. . +-...++.+||++++||+...|++|++-+=+|..|+
T Consensus       597 KA~P~y~-~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGa  675 (824)
T 2gj4_A          597 KAAPGYH-MAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGA  675 (824)
T ss_dssp             CCCTTCH-HHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTC
T ss_pred             eCCHhHH-HHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCc
Confidence            9887653 333343333322        1355  6888764 3 334577899999999999889999999999999999


Q ss_pred             cEEEeCCCCccccee--cCcceeeecCCCCChhHHHHHHH-------HHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 017085          291 PVLGTAAGGTTEIVV--NGTTGLLHPVGKEGITPLAKNIV-------KLAT-HVERRLTMGKRGYERVKEIFQEHHMAER  360 (377)
Q Consensus       291 PvI~s~~~~~~e~~~--~~~~g~~~~~~~~~~~~la~~i~-------~l~~-~~~~~~~~~~~~~~~~~~~f~~~~~~~~  360 (377)
                      +.|++--|...|+.+  ..+|||++...   ++++ .++.       .+.+ +++ .+++-++   .+...|+|..- ++
T Consensus       676 LtigtlDGanvEi~e~vG~~Ngf~FG~~---~~ev-~~l~~~~~~a~~~Y~~~~~-l~~v~d~---i~~g~fs~~~~-~~  746 (824)
T 2gj4_A          676 LTIGTMDGANVEMAEEAGEENFFIFGMR---VEDV-DRLDQRGYNAQEYYDRIPE-LRQIIEQ---LSSGFFSPKQP-DL  746 (824)
T ss_dssp             EEEECSCTTHHHHHHHHCGGGSEECSCC---HHHH-HHHHHHCCCHHHHHHHCHH-HHHHHHH---HHHTTTCTTST-TT
T ss_pred             eEEEEecCccchhhhccCCCCEEEeCCc---HHHH-HHHHHcCCCHHHHhcCCHH-HHHHHHH---HHhCCCCCCCh-HH
Confidence            999987777767654  35689998864   4555 4432       1222 232 2333333   23467999877 77


Q ss_pred             HHHHHHHHHh
Q 017085          361 IAVVLKEVLK  370 (377)
Q Consensus       361 ~~~~~~~~~~  370 (377)
                      |..+|.+++.
T Consensus       747 y~~ly~~l~~  756 (824)
T 2gj4_A          747 FKDIVNMLMH  756 (824)
T ss_dssp             THHHHHHHHH
T ss_pred             HHHHHHHHHc
Confidence            8899988864

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}

Probab=99.30  E-value=8.2e-12  Score=115.12  Aligned_cols=161  Identities=11%  Similarity=0.011  Sum_probs=116.5

Q ss_pred             CCCeEEEEeccccc-----cchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEE
Q 017085          175 NEDLLFAIINSVSR-----GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH  249 (377)
Q Consensus       175 ~~~~~i~~~G~~~~-----~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~  249 (377)
                      +...+++++|++..     .+.+..+++++..            .++++++++++..     .+.+.      .++++|.
T Consensus       266 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~------------~~~~~v~~~g~~~-----~~~l~------~~~~~v~  322 (441)
T 2yjn_A          266 ERRRVCLTLGISSRENSIGQVSIEELLGAVGD------------VDAEIIATFDAQQ-----LEGVA------NIPDNVR  322 (441)
T ss_dssp             SSCEEEEEC----------CCSTTTTHHHHHT------------SSSEEEECCCTTT-----TSSCS------SCCSSEE
T ss_pred             CCCEEEEECCCCcccccChHHHHHHHHHHHHc------------CCCEEEEEECCcc-----hhhhc------cCCCCEE
Confidence            34567888999865     3777788887752            3578888766531     11111      3467999


Q ss_pred             EecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC----CcccceecCcceeeecCCCCChhHHHH
Q 017085          250 FVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVNGTTGLLHPVGKEGITPLAK  325 (377)
Q Consensus       250 ~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~----~~~e~~~~~~~g~~~~~~~~~~~~la~  325 (377)
                      +.++.++ .++|..||++|..      +.++++.|||++|+|+|+....    ...+.+.+.+.|+.++..+.+.+++++
T Consensus       323 ~~~~~~~-~~ll~~ad~~V~~------~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~  395 (441)
T 2yjn_A          323 TVGFVPM-HALLPTCAATVHH------GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRE  395 (441)
T ss_dssp             ECCSCCH-HHHGGGCSEEEEC------CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHH
T ss_pred             EecCCCH-HHHHhhCCEEEEC------CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHH
Confidence            9999865 7889999999953      3367999999999999999763    355666667789988876434899999


Q ss_pred             HHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 017085          326 NIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK  366 (377)
Q Consensus       326 ~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  366 (377)
                      +|.++++|++.++++++.+.+. .+....+.+++.+++++.
T Consensus       396 ~i~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~  435 (441)
T 2yjn_A          396 SVKRVLDDPAHRAGAARMRDDM-LAEPSPAEVVGICEELAA  435 (441)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHH-HTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHhcCHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHH
Confidence            9999999999888888877764 456788888877776653

>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*

Probab=99.22  E-value=9.2e-10  Score=106.86  Aligned_cols=185  Identities=14%  Similarity=0.150  Sum_probs=141.7

Q ss_pred             HHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCC-C
Q 017085          167 VRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI-Q  245 (377)
Q Consensus       167 ~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~-~  245 (377)
                      .|+.+|++++.++|+.+.++  .|=-+.++++|.++++       +.|+.+|++.....    ...+.+++.+++.|+ +
T Consensus       513 ~R~~~gLp~~~v~f~~fN~~--~Ki~p~~~~~W~~IL~-------~vP~S~L~Ll~~~~----~~~~~l~~~~~~~gi~~  579 (723)
T 4gyw_A          513 TRSQYGLPEDAIVYCNFNQL--YKIDPSTLQMWANILK-------RVPNSVLWLLRFPA----VGEPNIQQYAQNMGLPQ  579 (723)
T ss_dssp             EGGGGTCCTTSEEEECCSCG--GGCCHHHHHHHHHHHH-------HCSSEEEEEEETTG----GGHHHHHHHHHHTTCCG
T ss_pred             chhhcCCCCCCEEEEeCCcc--ccCCHHHHHHHHHHHH-------hCCCCeEEEEeCcH----HHHHHHHHHHHhcCCCc
Confidence            47889999999888877754  5777889999998877       34899999887653    346778888888888 4


Q ss_pred             CcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccce-----ec-CcceeeecCCC
Q 017085          246 DRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIV-----VN-GTTGLLHPVGK  317 (377)
Q Consensus       246 ~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~-----~~-~~~g~~~~~~~  317 (377)
                      ++++|.+..  ++....+..+|++|-|.   ..+.+++..||+.||+|||+-....+..-+     .. |-.-+++.  +
T Consensus       580 ~r~~f~~~~~~~~~l~~~~~~Di~LDt~---p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~--~  654 (723)
T 4gyw_A          580 NRIIFSPVAPKEEHVRRGQLADVCLDTP---LCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAK--N  654 (723)
T ss_dssp             GGEEEEECCCHHHHHHHGGGCSEEECCS---SSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCS--S
T ss_pred             CeEEECCCCCHHHHHHHhCCCeEEeCCC---CcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccC--C
Confidence            689999975  56677889999999876   356689999999999999986432222111     11 11112322  3


Q ss_pred             CChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHhc
Q 017085          318 EGITPLAKNIVKLATHVERRLTMGKRGYERVKE--IFQEHHMAERIAVVLKEVLKK  371 (377)
Q Consensus       318 ~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~--~f~~~~~~~~~~~~~~~~~~~  371 (377)
                        .++..+.-.++.+|++.+.+++..-++....  -|+...+++.+++.|+++-.+
T Consensus       655 --~~~Y~~~a~~la~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r  708 (723)
T 4gyw_A          655 --RQEYEDIAVKLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH  708 (723)
T ss_dssp             --HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence              8999999999999999999998888776654  499999999999999988653

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=98.83  E-value=3.2e-08  Score=90.34  Aligned_cols=156  Identities=11%  Similarity=0.034  Sum_probs=103.3

Q ss_pred             CCeEEEEecccc---ccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEE-ecCCCcccHHHHHHHHHHHhcCCCCcEEEe
Q 017085          176 EDLLFAIINSVS---RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFV  251 (377)
Q Consensus       176 ~~~~i~~~G~~~---~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~-G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~  251 (377)
                      +..++++.|++.   ..+..+.++++++.            .+++++++ |.+..      + .      ..+++++.+.
T Consensus       237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~------------~~~~~v~~~g~~~~------~-~------~~~~~~v~~~  291 (416)
T 1rrv_A          237 SPPVHIGFGSSSGRGIADAAKVAVEAIRA------------QGRRVILSRGWTEL------V-L------PDDRDDCFAI  291 (416)
T ss_dssp             SCCEEECCTTCCSHHHHHHHHHHHHHHHH------------TTCCEEEECTTTTC------C-C------SCCCTTEEEE
T ss_pred             CCeEEEecCCCCccChHHHHHHHHHHHHH------------CCCeEEEEeCCccc------c-c------cCCCCCEEEe
Confidence            356777789874   34555555555542            24667665 65421      0 0      2346789999


Q ss_pred             cCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC----CcccceecCcceeeecCCCCChhHHHHHH
Q 017085          252 NKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVNGTTGLLHPVGKEGITPLAKNI  327 (377)
Q Consensus       252 g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~----~~~e~~~~~~~g~~~~~~~~~~~~la~~i  327 (377)
                      ++.+ ..++|..||++|..      +..+++.||+++|+|+|+....    ...+.+.+.+.|..++..+.+.++++++|
T Consensus       292 ~~~~-~~~ll~~~d~~v~~------~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i  364 (416)
T 1rrv_A          292 DEVN-FQALFRRVAAVIHH------GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAAL  364 (416)
T ss_dssp             SSCC-HHHHGGGSSEEEEC------CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHH
T ss_pred             ccCC-hHHHhccCCEEEec------CChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHH
Confidence            9975 67899999999953      3357999999999999997653    24445656678888875443489999999


Q ss_pred             HHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH-HHHHh
Q 017085          328 VKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL-KEVLK  370 (377)
Q Consensus       328 ~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~-~~~~~  370 (377)
                      .++ +|++.++++++.+.+     +....-. +..+.+ ++++.
T Consensus       365 ~~l-~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~i~e~~~~  401 (416)
T 1rrv_A          365 TTV-LAPETRARAEAVAGM-----VLTDGAA-AAADLVLAAVGR  401 (416)
T ss_dssp             HHH-TSHHHHHHHHHHTTT-----CCCCHHH-HHHHHHHHHHHC
T ss_pred             HHh-hCHHHHHHHHHHHHH-----HhhcCcH-HHHHHHHHHHhc
Confidence            999 998877666554433     2223333 445555 55543

>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*

Probab=98.66  E-value=2.4e-06  Score=72.81  Aligned_cols=93  Identities=8%  Similarity=0.068  Sum_probs=64.7

Q ss_pred             eEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCH
Q 017085          178 LLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTV  257 (377)
Q Consensus       178 ~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~  257 (377)
                      .+++++|..++..-...+++++.       +    ... -.++.|.+.    +..+++++..++.   .++.+.++.+++
T Consensus       159 ~ILv~~GG~d~~~l~~~vl~~L~-------~----~~~-i~vv~G~~~----~~~~~l~~~~~~~---~~v~v~~~~~~m  219 (282)
T 3hbm_A          159 DFFICMGGTDIKNLSLQIASELP-------K----TKI-ISIATSSSN----PNLKKLQKFAKLH---NNIRLFIDHENI  219 (282)
T ss_dssp             EEEEECCSCCTTCHHHHHHHHSC-------T----TSC-EEEEECTTC----TTHHHHHHHHHTC---SSEEEEESCSCH
T ss_pred             eEEEEECCCchhhHHHHHHHHhh-------c----CCC-EEEEECCCc----hHHHHHHHHHhhC---CCEEEEeCHHHH
Confidence            45566776655443334444332       1    123 335677775    3467777766643   379999999999


Q ss_pred             HHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC
Q 017085          258 APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA  296 (377)
Q Consensus       258 ~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~  296 (377)
                      .++|+.||+++.+       .|.++.|++++|+|.|...
T Consensus       220 ~~~m~~aDlvI~~-------gG~T~~E~~~~g~P~i~ip  251 (282)
T 3hbm_A          220 AKLMNESNKLIIS-------ASSLVNEALLLKANFKAIC  251 (282)
T ss_dssp             HHHHHTEEEEEEE-------SSHHHHHHHHTTCCEEEEC
T ss_pred             HHHHHHCCEEEEC-------CcHHHHHHHHcCCCEEEEe
Confidence            9999999999963       2579999999999999865

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*

Probab=98.56  E-value=1.2e-05  Score=78.49  Aligned_cols=254  Identities=11%  Similarity=0.085  Sum_probs=141.3

Q ss_pred             cCceEEEccchhHHHhhhcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccc-----------------h
Q 017085           39 RGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK-----------------L  101 (377)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~-----------------~  101 (377)
                      .+++++...+...+......++++.++..+..+        .+.....++.+.|+..-..+.                 .
T Consensus       399 ~~~~~v~~~s~~~~~~l~~a~~~v~n~~~~~~~--------~k~~~~~~iq~wHG~~lK~~g~d~~~~~~~~~~~~~~~~  470 (729)
T 3l7i_A          399 GSAEKVKRNSAEYYQAYSEASHWVSNARTPLYL--------NKKENQTYIQTWHGTPLKRLANDMKVVRMPGTTTPKYKR  470 (729)
T ss_dssp             SSCEEEETTSHHHHHHHHHEEEEEESSCCCTTS--------CCCTTCEEEECCSSCCSBCCGGGCSCCCCTTCCHHHHHH
T ss_pred             CCcEEEEECCHHHHHHHhcCcEEEECCCCcccc--------ccCCCcEEEECCCCCchhhccccccccccccccCHHHHH
Confidence            355555555555444455566777665443311        112234677788876211111                 0


Q ss_pred             hhhccccccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEE
Q 017085          102 DYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFA  181 (377)
Q Consensus       102 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~  181 (377)
                      .+......+|.+++.|....+.+.+    .++++..  .++..|.+....-...  ......++.+++.+++++++.+|+
T Consensus       471 ~~~~~~~~~D~~~~~s~~~~~~~~~----~f~~~~~--~i~~~G~PR~D~l~~~--~~~~~~~~~~~~~~~~~~~kk~IL  542 (729)
T 3l7i_A          471 NFNRETSRWDYLISPNRYSTEIFRS----AFWMDEE--RILEIGYPRNDVLVNR--ANDQEYLDEIRTHLNLPSDKKVIM  542 (729)
T ss_dssp             HHHHHHTTCSEEEESSHHHHHHHHH----HTCCCGG--GEEESCCGGGHHHHHS--TTCHHHHHHHHHHTTCCSSCEEEE
T ss_pred             HHHHhhccCCEEEeCCHHHHHHHHH----HhCCCcc--eEEEcCCCchHHHhcc--cchHHHHHHHHHHhCCCCCCeEEE
Confidence            1112235679999999988877765    5666544  4556666543222111  111233567899999999999999


Q ss_pred             Eeccccccc----h-----hHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEec
Q 017085          182 IINSVSRGK----G-----QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN  252 (377)
Q Consensus       182 ~~G~~~~~K----g-----~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g  252 (377)
                      |+-.+....    |     ...-++.+.   +.|.      .++.+++-..      +...   ......+..+.+....
T Consensus       543 yaPT~r~~~~~~~~~~~~~~~~~~~~l~---~~l~------~~~~li~r~H------p~~~---~~~~~~~~~~~~~~~~  604 (729)
T 3l7i_A          543 YAPTWRDDEFVSKGKYLFELKIDLDNLY---KELG------DDYVILLRMH------YLIS---NALDLSGYENFAIDVS  604 (729)
T ss_dssp             ECCCCCGGGCCGGGSSCCCCTTCHHHHH---HHHT------TTEEEEECCC------HHHH---TTCCCTTCTTTEEECT
T ss_pred             EeeeeeCCccccccccccchhhHHHHHH---HHcC------CCeEEEEecC------cchh---ccccccccCCcEEeCC
Confidence            998775531    1     111223332   2332      5677666554      2211   1111123345566555


Q ss_pred             CcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCC-------CChhHHHH
Q 017085          253 KTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGK-------EGITPLAK  325 (377)
Q Consensus       253 ~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~-------~~~~~la~  325 (377)
                      ...++.++|..||+++.=       ++-+++|++..++|||.... ...++.. ...|+.++..+       .+.++|.+
T Consensus       605 ~~~di~~ll~~aD~lITD-------ySSv~fD~~~l~kPiif~~~-D~~~Y~~-~~rg~y~d~~~~~pg~~~~~~~eL~~  675 (729)
T 3l7i_A          605 NYNDVSELFLISDCLITD-------YSSVMFDYGILKRPQFFFAY-DIDKYDK-GLRGFYMNYMEDLPGPIYTEPYGLAK  675 (729)
T ss_dssp             TCSCHHHHHHTCSEEEES-------SCTHHHHHGGGCCCEEEECT-TTTTTTS-SCCSBSSCTTSSSSSCEESSHHHHHH
T ss_pred             CCcCHHHHHHHhCEEEee-------chHHHHhHHhhCCCEEEecC-CHHHHhh-ccCCcccChhHhCCCCeECCHHHHHH
Confidence            557899999999999832       35589999999999997731 1222221 11333332211       12788999


Q ss_pred             HHHHHhhCHH
Q 017085          326 NIVKLATHVE  335 (377)
Q Consensus       326 ~i~~l~~~~~  335 (377)
                      +|.......+
T Consensus       676 ~i~~~~~~~~  685 (729)
T 3l7i_A          676 ELKNLDKVQQ  685 (729)
T ss_dssp             HHTTHHHHHH
T ss_pred             HHhhhhccch
Confidence            8887765433

>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*

Probab=98.05  E-value=1.1e-05  Score=74.20  Aligned_cols=95  Identities=14%  Similarity=0.020  Sum_probs=69.4

Q ss_pred             CCcEEEecCcCCHHHHHH--hcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC----CcccceecC-cceeeecCCC
Q 017085          245 QDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVNG-TTGLLHPVGK  317 (377)
Q Consensus       245 ~~~v~~~g~~~~~~~~~~--~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~----~~~e~~~~~-~~g~~~~~~~  317 (377)
                      ++++.+.++..+. ++|.  ++|++|      .-+..+++.||+++|+|+|+-...    .....+.+. +.|..++.++
T Consensus       324 ~~~~~v~~w~pq~-~vL~h~~~~~fv------th~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~  396 (456)
T 2c1x_A          324 RGYGMVVPWAPQA-EVLAHEAVGAFV------THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGV  396 (456)
T ss_dssp             TTTEEEESCCCHH-HHHTSTTEEEEE------ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGS
T ss_pred             CCceEEecCCCHH-HHhcCCcCCEEE------ecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCC
Confidence            3578888987664 7888  677887      334567999999999999987543    234445555 6788776543


Q ss_pred             CChhHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 017085          318 EGITPLAKNIVKLATHVERRLTMGKRGYER  347 (377)
Q Consensus       318 ~~~~~la~~i~~l~~~~~~~~~~~~~~~~~  347 (377)
                      .+.++++++|.++++|++ .+++++++++.
T Consensus       397 ~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l  425 (456)
T 2c1x_A          397 FTKSGLMSCFDQILSQEK-GKKLRENLRAL  425 (456)
T ss_dssp             CCHHHHHHHHHHHHHSHH-HHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHCCCc-HHHHHHHHHHH
Confidence            348999999999999986 55666666553

>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}

Probab=98.00  E-value=0.0013  Score=58.15  Aligned_cols=109  Identities=17%  Similarity=0.154  Sum_probs=69.0

Q ss_pred             HHHHHhCCCCC-CeEEEEeccccccchh--HHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhc
Q 017085          166 HVRESLGVRNE-DLLFAIINSVSRGKGQ--DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK  242 (377)
Q Consensus       166 ~~r~~~~~~~~-~~~i~~~G~~~~~Kg~--~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~  242 (377)
                      .+.+..|++.+ +++.+..|.-.+.|..  +.+.+++..+.+         .+++++++|+..     ..+..++..+..
T Consensus       174 ~~l~~~g~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~---------~g~~vvl~g~~~-----e~~~~~~i~~~~  239 (349)
T 3tov_A          174 EFYSSHGLTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGR---------LGYKTVFFGGPM-----DLEMVQPVVEQM  239 (349)
T ss_dssp             HHHHHTTCCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHH---------HTCEEEECCCTT-----THHHHHHHHHTC
T ss_pred             HHHHHcCCCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHh---------CCCeEEEEeCcc-----hHHHHHHHHHhc
Confidence            34456677654 4566666754455544  456666655433         257788877642     344455555554


Q ss_pred             CCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC
Q 017085          243 KIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA  296 (377)
Q Consensus       243 ~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~  296 (377)
                      + ...+.+.|..  .++.++++.||++|.+-.      |..-+ |.++|+|+|+-=
T Consensus       240 ~-~~~~~l~g~~sl~e~~ali~~a~~~i~~Ds------G~~Hl-Aaa~g~P~v~lf  287 (349)
T 3tov_A          240 E-TKPIVATGKFQLGPLAAAMNRCNLLITNDS------GPMHV-GISQGVPIVALY  287 (349)
T ss_dssp             S-SCCEECTTCCCHHHHHHHHHTCSEEEEESS------HHHHH-HHTTTCCEEEEC
T ss_pred             c-cccEEeeCCCCHHHHHHHHHhCCEEEECCC------CHHHH-HHhcCCCEEEEE
Confidence            4 2346666754  689999999999997533      44444 899999999863

>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*

Probab=97.97  E-value=8e-05  Score=68.05  Aligned_cols=149  Identities=11%  Similarity=-0.006  Sum_probs=91.1

Q ss_pred             CCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHH-HHHHhcCCCCcEEEecC
Q 017085          175 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELR-NYVMQKKIQDRVHFVNK  253 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~-~~~~~~~~~~~v~~~g~  253 (377)
                      +...+++..|+.... ..+.+.+.+..    |.+     .+.+++++-+..     ..+.+. ....+  .++++.+.++
T Consensus       272 ~~~vVyvsfGS~~~~-~~~~~~el~~~----l~~-----~~~~flw~~~~~-----~~~~lp~~~~~~--~~~~~~vv~w  334 (454)
T 3hbf_A          272 NSSVVYISFGSVVTP-PPHELTALAES----LEE-----CGFPFIWSFRGD-----PKEKLPKGFLER--TKTKGKIVAW  334 (454)
T ss_dssp             TTCEEEEECCSSCCC-CHHHHHHHHHH----HHH-----HCCCEEEECCSC-----HHHHSCTTHHHH--TTTTEEEESS
T ss_pred             CCceEEEecCCCCcC-CHHHHHHHHHH----HHh-----CCCeEEEEeCCc-----chhcCCHhHHhh--cCCceEEEee
Confidence            455677777887542 23334333332    222     356777654431     111111 11111  2468888899


Q ss_pred             cCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC----CcccceecC-cceeeecCCCCChhHHHHHHH
Q 017085          254 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVNG-TTGLLHPVGKEGITPLAKNIV  328 (377)
Q Consensus       254 ~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~----~~~e~~~~~-~~g~~~~~~~~~~~~la~~i~  328 (377)
                      ..+ ..+++.+++.++-++    +..++++||+++|+|+|+-...    .....+.+. +.|..++.+..+.++++++|.
T Consensus       335 ~Pq-~~vL~h~~v~~fvtH----~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~  409 (454)
T 3hbf_A          335 APQ-VEILKHSSVGVFLTH----SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALE  409 (454)
T ss_dssp             CCH-HHHHHSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHH
T ss_pred             CCH-HHHHhhcCcCeEEec----CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHH
Confidence            866 589999996554444    3357899999999999987543    233445453 688887754445899999999


Q ss_pred             HHhhCHHHHHHHHHHHHH
Q 017085          329 KLATHVERRLTMGKRGYE  346 (377)
Q Consensus       329 ~l~~~~~~~~~~~~~~~~  346 (377)
                      +++++++ .+++++++++
T Consensus       410 ~ll~~~~-~~~~r~~a~~  426 (454)
T 3hbf_A          410 LTMSSEK-GGIMRQKIVK  426 (454)
T ss_dssp             HHHSSHH-HHHHHHHHHH
T ss_pred             HHHCCCh-HHHHHHHHHH
Confidence            9998853 3455555554

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10

Probab=97.88  E-value=0.00032  Score=64.95  Aligned_cols=151  Identities=15%  Similarity=0.039  Sum_probs=91.4

Q ss_pred             CCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCC--c-ccHHHHHHHHHHHhcCCCCcEEEe
Q 017085          175 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMN--A-QTKFESELRNYVMQKKIQDRVHFV  251 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~--~-~~~~~~~l~~~~~~~~~~~~v~~~  251 (377)
                      +...+++..|++.. ...+.+.+.+..+    .+     .+.+++++-....  + .....+.+.+.   .  ++++.+.
T Consensus       294 ~~~vv~vs~GS~~~-~~~~~~~~~~~~l----~~-----~~~~~l~~~~~~~~~~~~~~l~~~~~~~---~--~~~~~v~  358 (482)
T 2pq6_A          294 PGSVVYVNFGSTTV-MTPEQLLEFAWGL----AN-----CKKSFLWIIRPDLVIGGSVIFSSEFTNE---I--ADRGLIA  358 (482)
T ss_dssp             TTCEEEEECCSSSC-CCHHHHHHHHHHH----HH-----TTCEEEEECCGGGSTTTGGGSCHHHHHH---H--TTTEEEE
T ss_pred             CCceEEEecCCccc-CCHHHHHHHHHHH----Hh-----cCCcEEEEEcCCccccccccCcHhHHHh---c--CCCEEEE
Confidence            34567777787643 2334444433322    22     4577776633210  0 00011233222   2  4689999


Q ss_pred             cCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC----ccccee-cCcceeeecCCCCChhHHHHH
Q 017085          252 NKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVV-NGTTGLLHPVGKEGITPLAKN  326 (377)
Q Consensus       252 g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~----~~e~~~-~~~~g~~~~~~~~~~~~la~~  326 (377)
                      ++..+. ++|+.+++-++-+    -+..+++.||+++|+|+|+-...+    ....+. ..+.|..++ .+.+.++++++
T Consensus       359 ~~~pq~-~~L~h~~~~~~vt----h~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~~~~~~~l~~~  432 (482)
T 2pq6_A          359 SWCPQD-KVLNHPSIGGFLT----HCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKREELAKL  432 (482)
T ss_dssp             SCCCHH-HHHTSTTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SSCCHHHHHHH
T ss_pred             eecCHH-HHhcCCCCCEEEe----cCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-CCCCHHHHHHH
Confidence            998665 6887766633323    334679999999999999986432    333343 456787776 33348999999


Q ss_pred             HHHHhhCHHHHHHHHHHHHHH
Q 017085          327 IVKLATHVERRLTMGKRGYER  347 (377)
Q Consensus       327 i~~l~~~~~~~~~~~~~~~~~  347 (377)
                      |.++++|++ .+++++++++.
T Consensus       433 i~~ll~~~~-~~~~r~~a~~l  452 (482)
T 2pq6_A          433 INEVIAGDK-GKKMKQKAMEL  452 (482)
T ss_dssp             HHHHHTSHH-HHHHHHHHHHH
T ss_pred             HHHHHcCCc-HHHHHHHHHHH
Confidence            999999986 46677776654

>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7

Probab=97.65  E-value=0.00027  Score=62.49  Aligned_cols=111  Identities=12%  Similarity=0.100  Sum_probs=69.9

Q ss_pred             HHHHHHHhCCC-CCCeEEEEecc-ccccchhH--HHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHH
Q 017085          164 REHVRESLGVR-NEDLLFAIINS-VSRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYV  239 (377)
Q Consensus       164 ~~~~r~~~~~~-~~~~~i~~~G~-~~~~Kg~~--~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~  239 (377)
                      ++.+++.++++ +++++++..|. ..+.|...  .+.+++..+.+         .+++++++|+..     ..+..++..
T Consensus       167 ~~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~---------~~~~vvl~g~~~-----e~~~~~~i~  232 (348)
T 1psw_A          167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID---------EGYQVVLFGSAK-----DHEAGNEIL  232 (348)
T ss_dssp             HHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH---------TTCEEEECCCGG-----GHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHH---------CCCeEEEEeChh-----hHHHHHHHH
Confidence            34567778886 44566677776 44556554  66666665533         368888887652     233333333


Q ss_pred             HhcCC---CCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe
Q 017085          240 MQKKI---QDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT  295 (377)
Q Consensus       240 ~~~~~---~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s  295 (377)
                      +..+-   ...+.+.|..  .++.++++.||++|.+..      |.. -.|.++|+|+|+-
T Consensus       233 ~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~Ds------g~~-HlAaa~g~P~v~l  286 (348)
T 1psw_A          233 AALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDS------GLM-HVAAALNRPLVAL  286 (348)
T ss_dssp             TTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESS------HHH-HHHHHTTCCEEEE
T ss_pred             HhhhhccccceEeccCcCCHHHHHHHHHhCCEEEecCC------HHH-HHHHHcCCCEEEE
Confidence            32210   1234566754  789999999999997653      333 3399999999975

>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*

Probab=97.57  E-value=0.00088  Score=61.62  Aligned_cols=137  Identities=18%  Similarity=0.148  Sum_probs=80.7

Q ss_pred             CCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc
Q 017085          175 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT  254 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~  254 (377)
                      +...+++..|+....-+.+.+.+++..+    .+     .+++++++-+....  ...+.+.+....   ++++.+.++.
T Consensus       275 ~~~vv~vs~GS~~~~~~~~~~~~~~~~l----~~-----~~~~~l~~~~~~~~--~l~~~~~~~~~~---~~~~~v~~w~  340 (463)
T 2acv_A          275 DKSVVFLCFGSMGVSFGPSQIREIALGL----KH-----SGVRFLWSNSAEKK--VFPEGFLEWMEL---EGKGMICGWA  340 (463)
T ss_dssp             TTCEEEEECCSSCCCCCHHHHHHHHHHH----HH-----HTCEEEEECCCCGG--GSCTTHHHHHHH---HCSEEEESSC
T ss_pred             CCceEEEEeccccccCCHHHHHHHHHHH----Hh-----CCCcEEEEECCCcc--cCChhHHHhhcc---CCCEEEEccC
Confidence            4456777788876222323333333322    21     35677765443100  011222222210   2478888887


Q ss_pred             CCHHHHHH--hcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC----Ccccc-eecCcceeee-c---CC--CCChh
Q 017085          255 LTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEI-VVNGTTGLLH-P---VG--KEGIT  321 (377)
Q Consensus       255 ~~~~~~~~--~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~----~~~e~-~~~~~~g~~~-~---~~--~~~~~  321 (377)
                      .+. .+|.  ++|++|.      -+..+++.||+++|+|+|+-...    ..... +...+.|..+ .   .+  ..+.+
T Consensus       341 pq~-~vL~h~~~~~fvt------h~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~  413 (463)
T 2acv_A          341 PQV-EVLAHKAIGGFVS------HCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAE  413 (463)
T ss_dssp             CHH-HHHHSTTEEEEEE------CCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHH
T ss_pred             CHH-HHhCCCccCeEEe------cCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHH
Confidence            665 5776  6777873      34468999999999999997543    23444 3555688877 2   22  22489


Q ss_pred             HHHHHHHHHhh
Q 017085          322 PLAKNIVKLAT  332 (377)
Q Consensus       322 ~la~~i~~l~~  332 (377)
                      +++++|.++++
T Consensus       414 ~l~~ai~~ll~  424 (463)
T 2acv_A          414 EIEKGLKDLMD  424 (463)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHHHHHHHh
Confidence            99999999996

>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*

Probab=97.49  E-value=0.0023  Score=59.13  Aligned_cols=81  Identities=12%  Similarity=-0.002  Sum_probs=56.8

Q ss_pred             EEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC----Ccccce-ecCcceeeecCC---CCC
Q 017085          248 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIV-VNGTTGLLHPVG---KEG  319 (377)
Q Consensus       248 v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~----~~~e~~-~~~~~g~~~~~~---~~~  319 (377)
                      +.+.++..+. ++|+.+++.++-+.    +..++++||+++|+|+|+-...    .....+ ..-+.|..++..   ..+
T Consensus       341 ~~v~~w~Pq~-~vL~h~~v~~fvtH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~  415 (480)
T 2vch_A          341 FVIPFWAPQA-QVLAHPSTGGFLTH----CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVR  415 (480)
T ss_dssp             EEEESCCCHH-HHHHSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCC
T ss_pred             EEEeCccCHH-HHhCCCCcCeEEec----ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccC
Confidence            4555677555 89999996444443    3457899999999999997543    234443 455677776543   234


Q ss_pred             hhHHHHHHHHHhhC
Q 017085          320 ITPLAKNIVKLATH  333 (377)
Q Consensus       320 ~~~la~~i~~l~~~  333 (377)
                      .++++++|.+++++
T Consensus       416 ~~~l~~av~~vl~~  429 (480)
T 2vch_A          416 REEVARVVKGLMEG  429 (480)
T ss_dssp             HHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhcC
Confidence            89999999999983

>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*

Probab=97.46  E-value=0.013  Score=51.04  Aligned_cols=101  Identities=13%  Similarity=0.079  Sum_probs=61.5

Q ss_pred             CCCCCCeEEEEeccccccchhH--HHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEE
Q 017085          172 GVRNEDLLFAIINSVSRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH  249 (377)
Q Consensus       172 ~~~~~~~~i~~~G~~~~~Kg~~--~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~  249 (377)
                      +..+++++++..|.-.+.|...  .+.+.+.    .|.+     .+++++++++++    ...+..++..+..  + ++.
T Consensus       174 ~~~~~~~i~l~pga~~~~k~wp~~~~~~l~~----~L~~-----~~~~vvl~~g~~----~e~~~~~~i~~~~--~-~~~  237 (326)
T 2gt1_A          174 PTDAGEYAVFLHATTRDDKHWPEEHWRELIG----LLAD-----SGIRIKLPWGAP----HEEERAKRLAEGF--A-YVE  237 (326)
T ss_dssp             CTTTTSEEEEECCCSSGGGSCCHHHHHHHHH----HTTT-----TCCEEEECCSSH----HHHHHHHHHHTTC--T-TEE
T ss_pred             cccCCCEEEEEeCCCCccccCCHHHHHHHHH----HHHH-----CCCcEEEecCCH----HHHHHHHHHHhhC--C-ccc
Confidence            3445567777777655556554  4444444    4433     467888874331    2233333433332  2 456


Q ss_pred             EecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe
Q 017085          250 FVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT  295 (377)
Q Consensus       250 ~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s  295 (377)
                      +.|..  .++.++++.||++|.+-.      |..=+ |.|+|+|+|+-
T Consensus       238 l~g~~sl~el~ali~~a~l~I~~DS------G~~Hl-Aaa~g~P~v~l  278 (326)
T 2gt1_A          238 VLPKMSLEGVARVLAGAKFVVSVDT------GLSHL-TAALDRPNITV  278 (326)
T ss_dssp             ECCCCCHHHHHHHHHTCSEEEEESS------HHHHH-HHHTTCCEEEE
T ss_pred             ccCCCCHHHHHHHHHhCCEEEecCC------cHHHH-HHHcCCCEEEE
Confidence            67753  789999999999997643      44444 77899999975

>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A

Probab=97.40  E-value=0.0001  Score=60.11  Aligned_cols=73  Identities=7%  Similarity=-0.031  Sum_probs=53.3

Q ss_pred             cEEEecCcCCHHHHHH-hcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCc--------ccceecCcceeeecCCC
Q 017085          247 RVHFVNKTLTVAPYLA-AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGT--------TEIVVNGTTGLLHPVGK  317 (377)
Q Consensus       247 ~v~~~g~~~~~~~~~~-~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~--------~e~~~~~~~g~~~~~~~  317 (377)
                      ++...++.+++.++|+ .||++|.      -+...+++|++++|+|.|.-..+..        ++.+.+.+.++++   +
T Consensus       115 ~v~v~~f~~~m~~~l~~~AdlvIs------haGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~---~  185 (224)
T 2jzc_A          115 KVIGFDFSTKMQSIIRDYSDLVIS------HAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC---A  185 (224)
T ss_dssp             EEEECCSSSSHHHHHHHHCSCEEE------SSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE---C
T ss_pred             eEEEeeccchHHHHHHhcCCEEEE------CCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc---C
Confidence            5677788899999999 9999994      3457799999999999998765421        2233333345555   3


Q ss_pred             CChhHHHHHHHHH
Q 017085          318 EGITPLAKNIVKL  330 (377)
Q Consensus       318 ~~~~~la~~i~~l  330 (377)
                        ++.|+++|.++
T Consensus       186 --~~~L~~~i~~l  196 (224)
T 2jzc_A          186 --PTETGLIAGLR  196 (224)
T ss_dssp             --SCTTTHHHHHH
T ss_pred             --HHHHHHHHHHH
Confidence              67788888776

>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1

Probab=92.54  E-value=1.7  Score=31.46  Aligned_cols=110  Identities=9%  Similarity=0.096  Sum_probs=71.1

Q ss_pred             eEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh---------cCEEEecCCCCCCccchHHHHHH
Q 017085          216 VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA---------IDVLVQNSQAWGECFGRITIEAM  286 (377)
Q Consensus       216 ~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~---------adv~l~ps~~~~e~~~~~~~Ea~  286 (377)
                      .+++|+.+..    .....+....+..|....+......++..+.+..         .|++++-..- .+.-|..+++.+
T Consensus         3 ~~ilivdd~~----~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~-~~~~g~~~~~~l   77 (140)
T 1k68_A            3 KKIFLVEDNK----ADIRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNL-PKKDGREVLAEI   77 (140)
T ss_dssp             CEEEEECCCH----HHHHHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSC-SSSCHHHHHHHH
T ss_pred             CeEEEEeCCH----HHHHHHHHHHHhcCCCceEEEECCHHHHHHHHHcccccccCCCCcEEEEecCC-CcccHHHHHHHH
Confidence            4677777753    4567778888877764456666655566666653         6887764431 334566677666


Q ss_pred             H-----cCCcEEEeC-CCC---cccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          287 A-----FQLPVLGTA-AGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       287 a-----~g~PvI~s~-~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                      .     ..+|+|.-. ...   ..+.+..|..+++..+-+  .+++..+|.+++.
T Consensus        78 ~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~--~~~l~~~i~~~~~  130 (140)
T 1k68_A           78 KSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSAN--LSQLFQIVKGIEE  130 (140)
T ss_dssp             HHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSS--HHHHHHHHHHHHH
T ss_pred             HcCcccccccEEEEecCCcHHHHHHHHHhchhheecCCCC--HHHHHHHHHHHHH
Confidence            5     457777543 322   233344577889999887  9999999988753

>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0

Probab=92.38  E-value=1.6  Score=31.94  Aligned_cols=112  Identities=12%  Similarity=0.177  Sum_probs=72.2

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHHc---
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAF---  288 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a~---  288 (377)
                      ...+++|+.+..    .....+....++.|....+.......+..+.+..  .|++++-..- .+.-|..+++.+..   
T Consensus         4 ~~~~ILivdd~~----~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l-~~~~g~~~~~~lr~~~~   78 (144)
T 3kht_A            4 RSKRVLVVEDNP----DDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGL-PIANGFEVMSAVRKPGA   78 (144)
T ss_dssp             -CEEEEEECCCH----HHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTC-GGGCHHHHHHHHHSSST
T ss_pred             CCCEEEEEeCCH----HHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCC-CCCCHHHHHHHHHhccc
Confidence            357788887753    4567777788877764345555544455555543  5777764431 34456777877765   


Q ss_pred             --CCcEEEeCCC-C---cccceecCcceeeecCC-CCChhHHHHHHHHHhh
Q 017085          289 --QLPVLGTAAG-G---TTEIVVNGTTGLLHPVG-KEGITPLAKNIVKLAT  332 (377)
Q Consensus       289 --g~PvI~s~~~-~---~~e~~~~~~~g~~~~~~-~~~~~~la~~i~~l~~  332 (377)
                        ++|+|+.... .   ..+.+..|..+++..+. +  .+++.++|.++++
T Consensus        79 ~~~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~--~~~l~~~i~~~l~  127 (144)
T 3kht_A           79 NQHTPIVILTDNVSDDRAKQCMAAGASSVVDKSSNN--VTDFYGRIYAIFS  127 (144)
T ss_dssp             TTTCCEEEEETTCCHHHHHHHHHTTCSEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCc--HHHHHHHHHHHHH
Confidence              5788765322 2   22334557889999998 7  9999999988764

>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*

Probab=91.88  E-value=3.8  Score=32.22  Aligned_cols=311  Identities=12%  Similarity=0.067  Sum_probs=160.5

Q ss_pred             hHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEccchhHHHh-hhcccEEEEcCchhhhH----H---HHHh
Q 017085            5 FLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINT-ALKADLIVLNTAVAGKW----L---DAVL   76 (377)
Q Consensus         5 ~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~----~---~~~~   76 (377)
                      ..+.+.||||+++.....+-..    .-.+.-+...++++..+...+.++ -++.|++++++..+...    +   ..++
T Consensus        26 dwfiknghevtlvyakdksftr----tsshdhksfsipvilakeydkalklvndcdiliinsvpatsvqeatinnykkll  101 (401)
T 1xv5_A           26 DWFIKNGHEVTLVYAKDKSFTR----TSSHDHKSFSIPVILAKEYDKALKLVNDCDILIINSVPATSVQEATINNYKKLL  101 (401)
T ss_dssp             HHHHHTTCEEEEEEECSSCCTT----TTSSSCTTTCEEECTTTCHHHHHHHHTSCSEEEEEECCBTTSCHHHHHHHHHHH
T ss_pred             hhhhcCCcEEEEEEeccccccc----cccccCccccceeEehhhhHHHhhhhccCcEEEEccCccchhHHHHHhhHHHHH
Confidence            3466899999999866543211    112233345677777666554444 47899999987432111    1   1222


Q ss_pred             hcCCCccccceeEEeeeecccccc--hhhhccccccceeeeeccchhhHhhhhhhh-hhh----c--cCCCeEEEEcCCh
Q 017085           77 KEDVPRVLPNVLWWIHEMRGHYFK--LDYVKHLPLVAGAMIDSHVTAEYWKNRTRE-RLR----I--KMPDTYVVHLGNS  147 (377)
Q Consensus        77 ~~~~~~~~~~~v~~~h~~~~~~~~--~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~----~--~~~~~~vi~ngi~  147 (377)
                      ..-.|..  +++..-|+..-....  .......+++|-++..|..- + +.+-+++ .|.    +  +.+..-.++|--+
T Consensus       102 dnikpsi--rvvvyqhdhsvlslrrnlgleetvrradvifshsdng-d-fnkvlmkewypetvslfddieeaptvynfqp  177 (401)
T 1xv5_A          102 DNIKPSI--RVVVYQHDHSVLSLRRNLGLEETVRRADVIFSHSDNG-D-FNKVLMKEWYPETVSLFDDIEEAPTVYNFQP  177 (401)
T ss_dssp             HHSCTTS--EEEEEECCCSHHHHTTBSSHHHHHHHCSEEEESCTTS-H-HHHTHHHHHSCSSCCSSSCCCCCCCEEECCC
T ss_pred             hcCCCce--EEEEEeccchhhhhhhhcChHHhhhhhceEEecCCCC-c-HHHHHHHhhccchhhhhcchhhCCceeccCC
Confidence            2223332  566666654221111  12233446778777766532 1 1111111 121    0  0111122333221


Q ss_pred             hhhHHHhhhhhhhhhhHHHHHHHhCCCCCC---eEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecC
Q 017085          148 KELMEVAEDNVAKRVLREHVRESLGVRNED---LLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSD  224 (377)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~  224 (377)
                      +-..             -.+|..+=-+-..   -+=-++||-..+||.-.+.+.-.+.++   -     ..-.-+.-|-.
T Consensus       178 pmdi-------------vkvrstywkdvseinmninrwigrtttwkgfyqmfdfhekflk---p-----agkstvmegle  236 (401)
T 1xv5_A          178 PMDI-------------VKVRSTYWKDVSEINMNINRWIGRTTTWKGFYQMFDFHEKFLK---P-----AGKSTVMEGLE  236 (401)
T ss_dssp             CBCH-------------HHHHHHHCCCGGGCEEEEEEEECCSCGGGCHHHHHHHHHHTTT---T-----TTCEEEEECCC
T ss_pred             Ccee-------------eeeehhhhccHHHhhcchhhhhcccchhHhHHHHhhHHHHhcC---c-----cchhhhhhhhh
Confidence            1110             1122222111111   223468999999999888887765433   1     12233344432


Q ss_pred             CCcccHHHHHHHHHHHhcCCCCcEEEecC--------------------c-CCHHHHHHhcCEEEecCCC----CCCccc
Q 017085          225 MNAQTKFESELRNYVMQKKIQDRVHFVNK--------------------T-LTVAPYLAAIDVLVQNSQA----WGECFG  279 (377)
Q Consensus       225 ~~~~~~~~~~l~~~~~~~~~~~~v~~~g~--------------------~-~~~~~~~~~adv~l~ps~~----~~e~~~  279 (377)
                      .  . +..-    .+++-|++  ..+.|.                    . .++.+-|+.+.+...-|.-    .....-
T Consensus       237 r--s-pafi----aikekgip--yeyygnreidkmnlapnqpaqildcyinsemlermsksgfgyqlsklnqkylqrsle  307 (401)
T 1xv5_A          237 R--S-PAFI----AIKEKGIP--YEYYGNREIDKMNLAPNQPAQILDCYINSEMLERMSKSGFGYQLSKLNQKYLQRSLE  307 (401)
T ss_dssp             C--S-HHHH----HHHHTTCC--EEEECGGGGGGCCCSSSCCEEEESCCCHHHHHHHHHTEEEEEECCCCCGGGCSSCCC
T ss_pred             c--C-CceE----EEcccCCc--hhhcCcchhhhhcCCCCCcchhhhheecHHHHHHhhhcCcccchHHHHHHHHHhhhh
Confidence            1  1 1221    23444554  333331                    1 4566777777776654431    123456


Q ss_pred             hHHHHHHHcCCcEEEeC---------CCCcccceecCcceee-ecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q 017085          280 RITIEAMAFQLPVLGTA---------AGGTTEIVVNGTTGLL-HPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVK  349 (377)
Q Consensus       280 ~~~~Ea~a~g~PvI~s~---------~~~~~e~~~~~~~g~~-~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~  349 (377)
                      .+-+|--|||+..|--.         +...+- . ..+.|++ ++..|  .+.--+.|.++-+|+.++.+-++.|+++.-
T Consensus       308 ythlelgacgtipvfwkstgenlkfrvdntpl-t-shdsgiiwfdend--mestferikelssdralydrerekayefly  383 (401)
T 1xv5_A          308 YTHLELGACGTIPVFWKSTGENLKFRVDNTPL-T-SHDSGIIWFDEND--MESTFERIKELSSDRALYDREREKAYEFLY  383 (401)
T ss_dssp             HHHHHHHHHTSEEEEEHHHHHHSBCTTTCCBG-G-GSCCSCEEECTTC--HHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred             hheeecccccceeeeecccCcceEEEecCCcc-c-ccCCceEEecCCc--hHHHHHHHHHhccchhhhhHHHHHHHHHHH
Confidence            77899999998666421         112221 1 2235544 45444  888889999999999999999999999876


Q ss_pred             HhcCHHHH
Q 017085          350 EIFQEHHM  357 (377)
Q Consensus       350 ~~f~~~~~  357 (377)
                      ++-+..-.
T Consensus       384 qhqdssfc  391 (401)
T 1xv5_A          384 QHQDSSFC  391 (401)
T ss_dssp             HHHBHHHH
T ss_pred             hcccccch
Confidence            65444433

>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0

Probab=91.48  E-value=1.9  Score=31.95  Aligned_cols=110  Identities=13%  Similarity=0.146  Sum_probs=72.1

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH-----------hcCEEEecCCCCCCccchHHH
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA-----------AIDVLVQNSQAWGECFGRITI  283 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~-----------~adv~l~ps~~~~e~~~~~~~  283 (377)
                      ..+++|+.+..    .....+...+++.|....+.......+..+.+.           ..|++++-..- .+.-|..++
T Consensus         4 ~~~ILivddd~----~~~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l-~~~~g~~~~   78 (152)
T 3heb_A            4 SVTIVMIEDDL----GHARLIEKNIRRAGVNNEIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNL-PDMTGIDIL   78 (152)
T ss_dssp             -CEEEEECCCH----HHHHHHHHHHHHTTCCCCEEEESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBC-SSSBHHHHH
T ss_pred             CceEEEEeCCH----HHHHHHHHHHHhCCCcceEEEeCCHHHHHHHHhccccccccccCCCCEEEEeCCC-CCCcHHHHH
Confidence            46778887753    456778888888876545666665555556553           36777764331 344567777


Q ss_pred             HHHHc-----CCcEEEeC-CCC---cccceecCcceeeecCCCCChhHHHHHHHHHh
Q 017085          284 EAMAF-----QLPVLGTA-AGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLA  331 (377)
Q Consensus       284 Ea~a~-----g~PvI~s~-~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~  331 (377)
                      +.+..     ++|+|... ...   ..+....|..+++..+-+  .++|.++|.++.
T Consensus        79 ~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~KP~~--~~~l~~~i~~~~  133 (152)
T 3heb_A           79 KLVKENPHTRRSPVVILTTTDDQREIQRCYDLGANVYITKPVN--YENFANAIRQLG  133 (152)
T ss_dssp             HHHHHSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSS--HHHHHHHHHHHH
T ss_pred             HHHHhcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEeCCCC--HHHHHHHHHHHH
Confidence            77654     57777543 322   223445577899999988  999999998773

>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}

Probab=90.59  E-value=2.5  Score=30.80  Aligned_cols=112  Identities=11%  Similarity=0.101  Sum_probs=70.5

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH----hcCEEEecCCCCCCccchHHHHHHH---
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA----AIDVLVQNSQAWGECFGRITIEAMA---  287 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~----~adv~l~ps~~~~e~~~~~~~Ea~a---  287 (377)
                      ..+++|+.+..    ...+.+....++.|.  .+......++....+.    ..|++++-..- .+.-|..+++.+.   
T Consensus         3 ~~~ilivdd~~----~~~~~l~~~l~~~g~--~v~~~~~~~~a~~~~~~~~~~~dlvi~d~~l-~~~~g~~~~~~l~~~~   75 (143)
T 3jte_A            3 LAKILVIDDES----TILQNIKFLLEIDGN--EVLTASSSTEGLRIFTENCNSIDVVITDMKM-PKLSGMDILREIKKIT   75 (143)
T ss_dssp             CCEEEEECSCH----HHHHHHHHHHHHTTC--EEEEESSHHHHHHHHHHTTTTCCEEEEESCC-SSSCHHHHHHHHHHHC
T ss_pred             CCEEEEEcCCH----HHHHHHHHHHHhCCc--eEEEeCCHHHHHHHHHhCCCCCCEEEEeCCC-CCCcHHHHHHHHHHhC
Confidence            35677777753    356677777777664  3554444445555554    56887764431 3445666665554   


Q ss_pred             cCCcEEEeC-CCC---cccceecCcceeeecCCCCChhHHHHHHHHHhhCHH
Q 017085          288 FQLPVLGTA-AGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVE  335 (377)
Q Consensus       288 ~g~PvI~s~-~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~  335 (377)
                      ..+|+|... ...   ..+.+..|..+++..+.+  .+++..+|..++....
T Consensus        76 ~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~--~~~l~~~l~~~~~~~~  125 (143)
T 3jte_A           76 PHMAVIILTGHGDLDNAILAMKEGAFEYLRKPVT--AQDLSIAINNAINRKK  125 (143)
T ss_dssp             TTCEEEEEECTTCHHHHHHHHHTTCSEEEESSCC--HHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEECCCCHHHHHHHHHhCcceeEeCCCC--HHHHHHHHHHHHHHHH
Confidence            367777543 322   233455677899999988  9999999998876443

>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}

Probab=90.43  E-value=3.1  Score=30.34  Aligned_cols=115  Identities=8%  Similarity=-0.052  Sum_probs=71.5

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh-------cCEEEecCCCCCCccchHHHHHH
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA-------IDVLVQNSQAWGECFGRITIEAM  286 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~-------adv~l~ps~~~~e~~~~~~~Ea~  286 (377)
                      ...+++|+.+..    .....+....+..+....+......++..+.+..       .|++++-..- .+.-|..+++.+
T Consensus         8 ~~~~iLivdd~~----~~~~~l~~~l~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l-~~~~g~~~~~~l   82 (146)
T 3ilh_A            8 KIDSVLLIDDDD----IVNFLNTTIIRMTHRVEEIQSVTSGNAAINKLNELYAAGRWPSIICIDINM-PGINGWELIDLF   82 (146)
T ss_dssp             CEEEEEEECSCH----HHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSC-SSSCHHHHHHHH
T ss_pred             ccceEEEEeCCH----HHHHHHHHHHHhcCCCeeeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCC-CCCCHHHHHHHH
Confidence            456778887752    3456677777776643245555544556566655       6887764431 344566777665


Q ss_pred             Hc-------CCcEEEeCCCC----cccceecC-cceeeecCCCCChhHHHHHHHHHhhCHH
Q 017085          287 AF-------QLPVLGTAAGG----TTEIVVNG-TTGLLHPVGKEGITPLAKNIVKLATHVE  335 (377)
Q Consensus       287 a~-------g~PvI~s~~~~----~~e~~~~~-~~g~~~~~~~~~~~~la~~i~~l~~~~~  335 (377)
                      ..       .+|+|......    ..+....+ ..+++..+-+  .++|.++|.+......
T Consensus        83 ~~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~~l~KP~~--~~~L~~~i~~~~~~~~  141 (146)
T 3ilh_A           83 KQHFQPMKNKSIVCLLSSSLDPRDQAKAEASDWVDYYVSKPLT--ANALNNLYNKVLNEGH  141 (146)
T ss_dssp             HHHCGGGTTTCEEEEECSSCCHHHHHHHHHCSSCCEEECSSCC--HHHHHHHHHHHHCC--
T ss_pred             HHhhhhccCCCeEEEEeCCCChHHHHHHHhcCCcceeeeCCCC--HHHHHHHHHHHHHhcc
Confidence            54       56776543322    22233345 6789999988  9999999998877543

>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}

Probab=90.32  E-value=2.3  Score=31.23  Aligned_cols=110  Identities=7%  Similarity=0.128  Sum_probs=70.2

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--hcCEEEecCCCCCCccchHHHHHHHc---
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAF---  288 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~--~adv~l~ps~~~~e~~~~~~~Ea~a~---  288 (377)
                      ...+++|+.+..    .....+.......|.  .|......++....+.  ..|++++-..- .+.-|..+++.+..   
T Consensus         7 ~~~~iLivd~~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~l~~~~~dlii~d~~l-~~~~g~~~~~~l~~~~~   79 (147)
T 2zay_A            7 KWWRIMLVDTQL----PALAASISALSQEGF--DIIQCGNAIEAVPVAVKTHPHLIITEANM-PKISGMDLFNSLKKNPQ   79 (147)
T ss_dssp             -CEEEEEECTTG----GGGHHHHHHHHHHTE--EEEEESSHHHHHHHHHHHCCSEEEEESCC-SSSCHHHHHHHHHTSTT
T ss_pred             CCceEEEEeCCH----HHHHHHHHHHHHcCC--eEEEeCCHHHHHHHHHcCCCCEEEEcCCC-CCCCHHHHHHHHHcCcc
Confidence            467888888764    356667777776664  3555444445545544  36887764431 34456777877764   


Q ss_pred             --CCcEEEe-CCCCc---ccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          289 --QLPVLGT-AAGGT---TEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       289 --g~PvI~s-~~~~~---~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                        .+|+|+. .....   .+.+..|..+++..+.+  .++|..+|..++.
T Consensus        80 ~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~--~~~L~~~i~~~~~  127 (147)
T 2zay_A           80 TASIPVIALSGRATAKEEAQLLDMGFIDFIAKPVN--AIRLSARIKRVLK  127 (147)
T ss_dssp             TTTSCEEEEESSCCHHHHHHHHHHTCSEEEESSCC--HHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCC--HHHHHHHHHHHHH
Confidence              5777754 33322   22344577899999888  9999999988875

>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1

Probab=90.23  E-value=3.1  Score=30.36  Aligned_cols=112  Identities=8%  Similarity=0.077  Sum_probs=72.3

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH------------hcCEEEecCCCCCCccchH
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA------------AIDVLVQNSQAWGECFGRI  281 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~------------~adv~l~ps~~~~e~~~~~  281 (377)
                      ...+++|+.+..    .....+....++.|....+......++..+.+.            ..|++++-..- .+.-|..
T Consensus         5 ~~~~iLivdd~~----~~~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l-~~~~g~~   79 (149)
T 1k66_A            5 ATQPLLVVEDSD----EDFSTFQRLLQREGVVNPIYRCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNL-PGTDGRE   79 (149)
T ss_dssp             TTSCEEEECCCH----HHHHHHHHHHHHTTBCSCEEEECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCC-SSSCHHH
T ss_pred             CCccEEEEECCH----HHHHHHHHHHHHcCCCceEEEECCHHHHHHHHHhcccccCcccCCCCcEEEEECCC-CCCCHHH
Confidence            446777887753    456777888888776435666665556666665            35887764431 3345667


Q ss_pred             HHHHHH-----cCCcEEEeC-CCC---cccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          282 TIEAMA-----FQLPVLGTA-AGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       282 ~~Ea~a-----~g~PvI~s~-~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                      +++.+.     ..+|+|+.. ...   ..+.+..|..+++..+-+  .++|.+.|.+++.
T Consensus        80 ~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~kP~~--~~~l~~~i~~~~~  137 (149)
T 1k66_A           80 VLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIVKPLE--IDRLTETVQTFIK  137 (149)
T ss_dssp             HHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSS--HHHHHHHHHHHHH
T ss_pred             HHHHHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEeCCCC--HHHHHHHHHHHHH
Confidence            777775     456777543 322   223344577889999887  9999999988753

>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}

Probab=90.19  E-value=4  Score=29.53  Aligned_cols=110  Identities=9%  Similarity=0.005  Sum_probs=69.3

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHHc---
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAF---  288 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a~---  288 (377)
                      ...+++|+.+..    ...+.+....+..|.  .|......++..+.+..  .|++++-..- .+.-|..+++.+..   
T Consensus         6 ~~~~iLivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~l~~~~~dlii~d~~l-~~~~g~~~~~~l~~~~~   78 (142)
T 3cg4_A            6 HKGDVMIVDDDA----HVRIAVKTILSDAGF--HIISADSGGQCIDLLKKGFSGVVLLDIMM-PGMDGWDTIRAILDNSL   78 (142)
T ss_dssp             CCCEEEEECSCH----HHHHHHHHHHHHTTC--EEEEESSHHHHHHHHHTCCCEEEEEESCC-SSSCHHHHHHHHHHTTC
T ss_pred             CCCeEEEEcCCH----HHHHHHHHHHHHCCe--EEEEeCCHHHHHHHHHhcCCCEEEEeCCC-CCCCHHHHHHHHHhhcc
Confidence            457788887753    456677777777765  35555444455555543  5777754331 33456677777754   


Q ss_pred             --CCcEEEe-CC---CCcccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          289 --QLPVLGT-AA---GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       289 --g~PvI~s-~~---~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                        .+|+|.. ..   ....+.+..|..+++..+-+  .++|.++|..++.
T Consensus        79 ~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~~--~~~l~~~i~~~~~  126 (142)
T 3cg4_A           79 EQGIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFD--NEDLIEKTTFFMG  126 (142)
T ss_dssp             CTTEEEEEEECTTCCCCSSTTGGGGEEEEEESSCC--HHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHhcCccEEEeCCCC--HHHHHHHHHHHHH
Confidence              4677654 22   22344455567789999887  9999999988764

>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A

Probab=89.65  E-value=4  Score=29.10  Aligned_cols=110  Identities=12%  Similarity=0.152  Sum_probs=69.6

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH---hcCEEEecCCCCCCccchHHHHHHHc---
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA---AIDVLVQNSQAWGECFGRITIEAMAF---  288 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~---~adv~l~ps~~~~e~~~~~~~Ea~a~---  288 (377)
                      ..+++|+.+..    .....+....++.|.. .+.......+....+.   ..|++++-..- .+.-|..+++.+..   
T Consensus         5 ~~~iLivdd~~----~~~~~l~~~L~~~g~~-~v~~~~~~~~a~~~~~~~~~~dlvi~D~~~-p~~~g~~~~~~lr~~~~   78 (129)
T 3h1g_A            5 SMKLLVVDDSS----TMRRIIKNTLSRLGYE-DVLEAEHGVEAWEKLDANADTKVLITDWNM-PEMNGLDLVKKVRSDSR   78 (129)
T ss_dssp             -CCEEEECSCH----HHHHHHHHHHHHTTCC-CEEEESSHHHHHHHHHHCTTCCEEEECSCC-SSSCHHHHHHHHHTSTT
T ss_pred             CcEEEEEeCCH----HHHHHHHHHHHHcCCc-EEEEeCCHHHHHHHHHhCCCCCEEEEeCCC-CCCCHHHHHHHHHhcCC
Confidence            46778887753    4567778888887764 3444443334333332   36777754331 34457778877753   


Q ss_pred             --CCcEEEeC-CCCc---ccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          289 --QLPVLGTA-AGGT---TEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       289 --g~PvI~s~-~~~~---~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                        .+|+|... ....   .+.+..|..+++..|-+  .+++.++|..++.
T Consensus        79 ~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~--~~~L~~~l~~~l~  126 (129)
T 3h1g_A           79 FKEIPIIMITAEGGKAEVITALKAGVNNYIVKPFT--PQVLKEKLEVVLG  126 (129)
T ss_dssp             CTTCCEEEEESCCSHHHHHHHHHHTCCEEEESCCC--HHHHHHHHHHHHC
T ss_pred             CCCCeEEEEeCCCChHHHHHHHHcCccEEEeCCCC--HHHHHHHHHHHhc
Confidence              57877643 3322   23445578899999988  9999999988875

>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}

Probab=89.62  E-value=4.5  Score=29.23  Aligned_cols=111  Identities=12%  Similarity=0.061  Sum_probs=69.6

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHHc---
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAF---  288 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a~---  288 (377)
                      ...+++|+.+..    .....+....++.|.  .+......++..+.+..  .|++++-..- .+.-|..+++.+..   
T Consensus         5 ~~~~iLivdd~~----~~~~~l~~~l~~~g~--~v~~~~~~~~a~~~l~~~~~dlvi~d~~l-~~~~g~~~~~~l~~~~~   77 (140)
T 3grc_A            5 PRPRILICEDDP----DIARLLNLMLEKGGF--DSDMVHSAAQALEQVARRPYAAMTVDLNL-PDQDGVSLIRALRRDSR   77 (140)
T ss_dssp             CCSEEEEECSCH----HHHHHHHHHHHHTTC--EEEEECSHHHHHHHHHHSCCSEEEECSCC-SSSCHHHHHHHHHTSGG
T ss_pred             CCCCEEEEcCCH----HHHHHHHHHHHHCCC--eEEEECCHHHHHHHHHhCCCCEEEEeCCC-CCCCHHHHHHHHHhCcc
Confidence            345777777653    356667777777665  35544444444444433  5777764431 34456777777664   


Q ss_pred             --CCcEEEeCCCC----cc-cceecCcceeeecCCCCChhHHHHHHHHHhhC
Q 017085          289 --QLPVLGTAAGG----TT-EIVVNGTTGLLHPVGKEGITPLAKNIVKLATH  333 (377)
Q Consensus       289 --g~PvI~s~~~~----~~-e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~  333 (377)
                        .+|+|.-....    .. +....|..+++..+-+  .++|..+|.++++.
T Consensus        78 ~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~~--~~~l~~~i~~~l~~  127 (140)
T 3grc_A           78 TRDLAIVVVSANAREGELEFNSQPLAVSTWLEKPID--ENLLILSLHRAIDN  127 (140)
T ss_dssp             GTTCEEEEECTTHHHHHHHHCCTTTCCCEEECSSCC--HHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEecCCChHHHHHHhhhcCCCEEEeCCCC--HHHHHHHHHHHHHh
Confidence              67887654322    11 3445577889999887  99999999988753

>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A

Probab=89.56  E-value=3.2  Score=29.98  Aligned_cols=107  Identities=10%  Similarity=0.072  Sum_probs=64.8

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHH--c-
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMA--F-  288 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a--~-  288 (377)
                      ...+++|+.+..    .....+...++..|.  .+......++....+..  .|++++|.     .-|..+++.+.  . 
T Consensus        17 ~~~~ilivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~al~~l~~~~~dlvi~~~-----~~g~~~~~~l~~~~~   85 (137)
T 2pln_A           17 GSMRVLLIEKNS----VLGGEIEKGLNVKGF--MADVTESLEDGEYLMDIRNYDLVMVSD-----KNALSFVSRIKEKHS   85 (137)
T ss_dssp             TCSEEEEECSCH----HHHHHHHHHHHHTTC--EEEEESCHHHHHHHHHHSCCSEEEECS-----TTHHHHHHHHHHHST
T ss_pred             CCCeEEEEeCCH----HHHHHHHHHHHHcCc--EEEEeCCHHHHHHHHHcCCCCEEEEcC-----ccHHHHHHHHHhcCC
Confidence            456777777653    345666666766654  35544443444444443  57777333     33556665554  3 


Q ss_pred             CCcEEEeC-CCC---cccceecCcceeeecCC-CCChhHHHHHHHHHhhC
Q 017085          289 QLPVLGTA-AGG---TTEIVVNGTTGLLHPVG-KEGITPLAKNIVKLATH  333 (377)
Q Consensus       289 g~PvI~s~-~~~---~~e~~~~~~~g~~~~~~-~~~~~~la~~i~~l~~~  333 (377)
                      .+|+|... ...   ..+.+..|..+++..+. +  .++|..+|..++..
T Consensus        86 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~--~~~l~~~i~~~~~~  133 (137)
T 2pln_A           86 SIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRS--IKALVARIEARLRF  133 (137)
T ss_dssp             TSEEEEEESSCCHHHHHHHHHTTCSEEEESSCSC--HHHHHHHHHHHTC-
T ss_pred             CccEEEEeCCCCHHHHHHHHHcCCceeeeCCCCC--HHHHHHHHHHHHhh
Confidence            67877543 322   23334457788999987 8  99999999888753

>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}

Probab=89.40  E-value=4.7  Score=29.19  Aligned_cols=109  Identities=14%  Similarity=0.065  Sum_probs=69.3

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH---hcCEEEecCCCCCC-ccchHHHHHHH--c
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA---AIDVLVQNSQAWGE-CFGRITIEAMA--F  288 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~---~adv~l~ps~~~~e-~~~~~~~Ea~a--~  288 (377)
                      ..+++|+.+..    .....+....++.|.  .+.......+....+.   ..|++++-..- .+ .-|..+++.+.  .
T Consensus         5 ~~~ilivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l-~~~~~g~~~~~~l~~~~   77 (140)
T 3h5i_A            5 DKKILIVEDSK----FQAKTIANILNKYGY--TVEIALTGEAAVEKVSGGWYPDLILMDIEL-GEGMDGVQTALAIQQIS   77 (140)
T ss_dssp             -CEEEEECSCH----HHHHHHHHHHHHTTC--EEEEESSHHHHHHHHHTTCCCSEEEEESSC-SSSCCHHHHHHHHHHHC
T ss_pred             CcEEEEEeCCH----HHHHHHHHHHHHcCC--EEEEecChHHHHHHHhcCCCCCEEEEeccC-CCCCCHHHHHHHHHhCC
Confidence            46778887753    456777777777764  3554444445555553   35887765431 23 45666666554  4


Q ss_pred             CCcEEEeC-CC---CcccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          289 QLPVLGTA-AG---GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       289 g~PvI~s~-~~---~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                      .+|+|+-. ..   ...+....|..+++..+-+  .++|..+|.+++.
T Consensus        78 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~--~~~l~~~i~~~l~  123 (140)
T 3h5i_A           78 ELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSAT--EQVLITIVEMALR  123 (140)
T ss_dssp             CCCEEEEESSSSCCCCGGGGGSCEEEEEETTCC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHhCCCcEEEeCCCC--HHHHHHHHHHHHH
Confidence            77877542 22   2334555677899999988  9999999988875

>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A

Probab=89.15  E-value=4.5  Score=29.75  Aligned_cols=111  Identities=10%  Similarity=0.139  Sum_probs=67.0

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH---------hcCEEEecCCCCCCccchHHHH
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA---------AIDVLVQNSQAWGECFGRITIE  284 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~---------~adv~l~ps~~~~e~~~~~~~E  284 (377)
                      ...+++|+.+..    .....+....+..+....+.......+..+++.         ..|++++-..- .+.-|..+++
T Consensus         7 ~~~~ILivdd~~----~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~~~~~~~~dlillD~~l-p~~~g~~l~~   81 (149)
T 1i3c_A            7 PPKVILLVEDSK----ADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQQQGEYENSPRPNLILLDLNL-PKKDGREVLA   81 (149)
T ss_dssp             CCEEEEEECCCH----HHHHHHHHHHHSCCSCEEEEEECSHHHHHHHHTTCGGGTTCCCCSEEEECSCC-SSSCHHHHHH
T ss_pred             CCCeEEEEECCH----HHHHHHHHHHHhcCCCccEEEeCCHHHHHHHHHhccccccCCCCCEEEEeCCC-CCCcHHHHHH
Confidence            356777887752    345667777776554323444443345555554         36887764331 2334666777


Q ss_pred             HHHc-----CCcEEEe-CCCC---cccceecCcceeeecCCCCChhHHHHHHHHHh
Q 017085          285 AMAF-----QLPVLGT-AAGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLA  331 (377)
Q Consensus       285 a~a~-----g~PvI~s-~~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~  331 (377)
                      .+..     .+|+|.. ....   ..+.+..|..+++..+.+  .++|..+|.+++
T Consensus        82 ~l~~~~~~~~~piiils~~~~~~~~~~~~~~ga~~~l~KP~~--~~~L~~~i~~~~  135 (149)
T 1i3c_A           82 EIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRN--LKDLFKMVQGIE  135 (149)
T ss_dssp             HHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSS--HHHHHHHHHHHH
T ss_pred             HHHhCcCcCCCeEEEEECCCChHHHHHHHHcCCcEEEECCCC--HHHHHHHHHHHH
Confidence            6643     5677654 3332   233345577899999988  999999887764

>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A

Probab=88.28  E-value=4.8  Score=29.78  Aligned_cols=112  Identities=9%  Similarity=0.123  Sum_probs=67.2

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--hcCEEEecCCCCCCccchHHHHHHH---cC
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMA---FQ  289 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~--~adv~l~ps~~~~e~~~~~~~Ea~a---~g  289 (377)
                      ..+++|+.+..    .....+.......|.  .|......++....+.  ..|++++-..- .+.-|..+++.+.   ..
T Consensus         3 ~~~ILivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~l~~~~~dliild~~l-~~~~g~~~~~~l~~~~~~   75 (155)
T 1qkk_A            3 APSVFLIDDDR----DLRKAMQQTLELAGF--TVSSFASATEALAGLSADFAGIVISDIRM-PGMDGLALFRKILALDPD   75 (155)
T ss_dssp             -CEEEEECSCH----HHHHHHHHHHHHTTC--EEEEESCHHHHHHTCCTTCCSEEEEESCC-SSSCHHHHHHHHHHHCTT
T ss_pred             CCEEEEEeCCH----HHHHHHHHHHHHcCc--EEEEECCHHHHHHHHHhCCCCEEEEeCCC-CCCCHHHHHHHHHhhCCC
Confidence            45677777753    356677777777665  3554443333333332  35777764331 3334566666553   46


Q ss_pred             CcEEEeC-CCC---cccceecCcceeeecCCCCChhHHHHHHHHHhhCHH
Q 017085          290 LPVLGTA-AGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVE  335 (377)
Q Consensus       290 ~PvI~s~-~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~  335 (377)
                      +|+|+.. ...   ..+.+..|..+++..+.+  .+++...|..++....
T Consensus        76 ~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~--~~~L~~~i~~~~~~~~  123 (155)
T 1qkk_A           76 LPMILVTGHGDIPMAVQAIQDGAYDFIAKPFA--ADRLVQSARRAEEKRR  123 (155)
T ss_dssp             SCEEEEECGGGHHHHHHHHHTTCCEEEESSCC--HHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHhcCCCeEEeCCCC--HHHHHHHHHHHHHHHH
Confidence            8877543 222   233344577899999888  9999999998875443

>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}

Probab=88.21  E-value=4.3  Score=30.21  Aligned_cols=108  Identities=7%  Similarity=0.073  Sum_probs=62.6

Q ss_pred             eEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEE-EecCcCCHHHHHH----hcCEEEecCCCCCCccchHHHHHHH---
Q 017085          216 VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH-FVNKTLTVAPYLA----AIDVLVQNSQAWGECFGRITIEAMA---  287 (377)
Q Consensus       216 ~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~-~~g~~~~~~~~~~----~adv~l~ps~~~~e~~~~~~~Ea~a---  287 (377)
                      .+++|+.+..    ...+.+...+++.|.  .+. .....++..+.+.    ..|++++-..- .+.-|..+++.+.   
T Consensus        37 ~~Ilivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~~al~~l~~~~~~~dliilD~~l-~~~~g~~~~~~lr~~~  109 (157)
T 3hzh_A           37 FNVLIVDDSV----FTVKQLTQIFTSEGF--NIIDTAADGEEAVIKYKNHYPNIDIVTLXITM-PKMDGITCLSNIMEFD  109 (157)
T ss_dssp             CEEEEECSCH----HHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHGGGCCEEEECSSC-SSSCHHHHHHHHHHHC
T ss_pred             eEEEEEeCCH----HHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHhcCCCCCEEEEeccC-CCccHHHHHHHHHhhC
Confidence            5666666642    345566666666554  233 3333344444443    34777764431 3344566665553   


Q ss_pred             cCCcEEEeCCC-C---cccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          288 FQLPVLGTAAG-G---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       288 ~g~PvI~s~~~-~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                      ..+|+|+.... .   ..+.+..|..+++..+.+  .++|.++|.+++.
T Consensus       110 ~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~--~~~l~~~i~~~l~  156 (157)
T 3hzh_A          110 KNARVIMISALGKEQLVKDCLIKGAKTFIVKPLD--RAKVLQRVMSVFV  156 (157)
T ss_dssp             TTCCEEEEESCCCHHHHHHHHHTTCSEEEESSCC--HHHHHHHHHHTTC
T ss_pred             CCCcEEEEeccCcHHHHHHHHHcCCCEEEeCCCC--HHHHHHHHHHHhc
Confidence            36777754322 2   223345577889999888  9999999988764

>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A

Probab=88.09  E-value=5  Score=29.49  Aligned_cols=113  Identities=9%  Similarity=0.075  Sum_probs=65.0

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHHc---
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAF---  288 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a~---  288 (377)
                      ...+++|+.+..    ...+.+....++.+....+......++..+.+..  .|++++-..- .+.-|..+++.+..   
T Consensus        19 ~m~~iLivdd~~----~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l-~~~~g~~~~~~l~~~~~   93 (150)
T 4e7p_A           19 SHMKVLVAEDQS----MLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEM-PVKTGLEVLEWIRSEKL   93 (150)
T ss_dssp             -CEEEEEECSCH----HHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSC-SSSCHHHHHHHHHHTTC
T ss_pred             CccEEEEEcCCH----HHHHHHHHHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCC-CCCcHHHHHHHHHHhCC
Confidence            346677776652    3455566666554321223333333444444432  5777654331 34456666666543   


Q ss_pred             CCcEEEeC-CCC---cccceecCcceeeecCCCCChhHHHHHHHHHhhC
Q 017085          289 QLPVLGTA-AGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH  333 (377)
Q Consensus       289 g~PvI~s~-~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~  333 (377)
                      .+|+|... ...   ..+.+..|..+++..+.+  .+++.++|.+++..
T Consensus        94 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~~--~~~l~~~i~~~~~~  140 (150)
T 4e7p_A           94 ETKVVVVTTFKRAGYFERAVKAGVDAYVLKERS--IADLMQTLHTVLEG  140 (150)
T ss_dssp             SCEEEEEESCCCHHHHHHHHHTTCSEEEETTSC--HHHHHHHHHHHHTT
T ss_pred             CCeEEEEeCCCCHHHHHHHHHCCCcEEEecCCC--HHHHHHHHHHHHcC
Confidence            56776543 222   233455677899999888  99999999988763

>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}

Probab=87.87  E-value=5  Score=29.53  Aligned_cols=114  Identities=14%  Similarity=0.077  Sum_probs=68.6

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--hcCEEEecCCCCCCccchHHHHHHHc---
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAF---  288 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~--~adv~l~ps~~~~e~~~~~~~Ea~a~---  288 (377)
                      ...+++|+.+..    ...+.+....++.+....+......++..+.+.  ..|++++-..- .+.-|..+++.+..   
T Consensus        14 ~~~~iLivdd~~----~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l-~~~~g~~~~~~l~~~~~   88 (152)
T 3eul_A           14 EKVRVVVGDDHP----LFREGVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRM-PGMDGAQVAAAVRSYEL   88 (152)
T ss_dssp             CCEEEEEECSSH----HHHHHHHHHHHHHSSEEEEEEESSHHHHHHHHHHHCCSEEEEETTC-SSSCHHHHHHHHHHTTC
T ss_pred             ceEEEEEEcCCH----HHHHHHHHHHhhCCCeEEEEEeCCHHHHHHHHHhcCCCEEEEeCCC-CCCCHHHHHHHHHhcCC
Confidence            567778887753    355667777776653212323333344444443  36777764331 34456666666543   


Q ss_pred             CCcEEEeC-CCC---cccceecCcceeeecCCCCChhHHHHHHHHHhhCH
Q 017085          289 QLPVLGTA-AGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHV  334 (377)
Q Consensus       289 g~PvI~s~-~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~  334 (377)
                      .+|+|... ...   ..+.+..|..+++..+.+  .+++.++|.+++...
T Consensus        89 ~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~~--~~~l~~~i~~~~~~~  136 (152)
T 3eul_A           89 PTRVLLISAHDEPAIVYQALQQGAAGFLLKDST--RTEIVKAVLDCAKGR  136 (152)
T ss_dssp             SCEEEEEESCCCHHHHHHHHHTTCSEEEETTCC--HHHHHHHHHHHHHCC
T ss_pred             CCeEEEEEccCCHHHHHHHHHcCCCEEEecCCC--HHHHHHHHHHHHcCC
Confidence            56776543 322   223455678899999988  999999999988754

>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}

Probab=87.29  E-value=6.1  Score=28.56  Aligned_cols=110  Identities=10%  Similarity=-0.018  Sum_probs=70.8

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--------cCEEEecCCCCCCccchHHHHHH
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--------IDVLVQNSQAWGECFGRITIEAM  286 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--------adv~l~ps~~~~e~~~~~~~Ea~  286 (377)
                      ..+++|+.+..    .....+....++.|....+.......+....+..        .|++++-..- .+.-|..+++.+
T Consensus         7 ~~~ILivdd~~----~~~~~l~~~L~~~g~~~~v~~~~~~~~a~~~l~~~~~~~~~~~dlii~D~~l-~~~~g~~~~~~l   81 (143)
T 2qvg_A            7 KVDILYLEDDE----VDIQSVERVFHKISSLIKIEIAKSGNQALDMLYGRNKENKIHPKLILLDINI-PKMNGIEFLKEL   81 (143)
T ss_dssp             CCSEEEECCCH----HHHHHHHHHHHHHCTTCCEEEESSHHHHHHHHHTCTTCCCCCCSEEEEETTC-TTSCHHHHHHHH
T ss_pred             CCeEEEEeCCH----HHHHHHHHHHHHhCCCceEEEECCHHHHHHHHHhcccccCCCCCEEEEecCC-CCCCHHHHHHHH
Confidence            46777887763    4567778888877764457666665666666653        6887764331 333466777776


Q ss_pred             H-----cCCcEEEe-CCCC---cccceecCcceeeecCCCCChhHHHHHHHHHh
Q 017085          287 A-----FQLPVLGT-AAGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLA  331 (377)
Q Consensus       287 a-----~g~PvI~s-~~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~  331 (377)
                      .     ..+|+|+. ....   ..+....|..+++..+-+  .+++.+++....
T Consensus        82 ~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~--~~~L~~~~~~~~  133 (143)
T 2qvg_A           82 RDDSSFTDIEVFVLTAAYTSKDKLAFESLNIRGHLIKPLD--YGEAIKLFWILQ  133 (143)
T ss_dssp             TTSGGGTTCEEEEEESCCCHHHHHHHTTTTCCEEEESSCC--HHHHHHHHHHHH
T ss_pred             HcCccccCCcEEEEeCCCCHHHHHHHHhcCCCeEEECCCC--HHHHHHHHHHHH
Confidence            5     46777754 3222   233344577889999888  899988876543

>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}

Probab=87.13  E-value=6.7  Score=29.00  Aligned_cols=110  Identities=13%  Similarity=0.157  Sum_probs=69.1

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHH----
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMA----  287 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a----  287 (377)
                      ...+++|+.+..    .....+....++.|.  .|......++..+.+..  .|++++-..- .+.-|..+++.+.    
T Consensus         6 ~~~~ILivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~al~~l~~~~~dlii~D~~l-~~~~g~~~~~~lr~~~~   78 (154)
T 3gt7_A            6 RAGEILIVEDSP----TQAEHLKHILEETGY--QTEHVRNGREAVRFLSLTRPDLIISDVLM-PEMDGYALCRWLKGQPD   78 (154)
T ss_dssp             -CCEEEEECSCH----HHHHHHHHHHHTTTC--EEEEESSHHHHHHHHTTCCCSEEEEESCC-SSSCHHHHHHHHHHSTT
T ss_pred             CCCcEEEEeCCH----HHHHHHHHHHHHCCC--EEEEeCCHHHHHHHHHhCCCCEEEEeCCC-CCCCHHHHHHHHHhCCC
Confidence            356778887753    356677777777664  35444443444455433  5777764431 3445677777765    


Q ss_pred             -cCCcEEEeC-CCC---cccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          288 -FQLPVLGTA-AGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       288 -~g~PvI~s~-~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                       ..+|+|+.. ...   ..+.+..|..+++..+-+  .+++..+|.+++.
T Consensus        79 ~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~--~~~l~~~i~~~l~  126 (154)
T 3gt7_A           79 LRTIPVILLTILSDPRDVVRSLECGADDFITKPCK--DVVLASHVKRLLS  126 (154)
T ss_dssp             TTTSCEEEEECCCSHHHHHHHHHHCCSEEEESSCC--HHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCChHHHHHHHHCCCCEEEeCCCC--HHHHHHHHHHHHH
Confidence             357877543 222   223344577899999988  9999999998875

>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}

Probab=86.67  E-value=3.7  Score=29.74  Aligned_cols=112  Identities=8%  Similarity=-0.003  Sum_probs=70.1

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHh-cCCCCcEEEecCcCCHHHHHHh---cCEEEecCCCCC-CccchHHHHHHHc-
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQ-KKIQDRVHFVNKTLTVAPYLAA---IDVLVQNSQAWG-ECFGRITIEAMAF-  288 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~g~~~~~~~~~~~---adv~l~ps~~~~-e~~~~~~~Ea~a~-  288 (377)
                      ..+++|+.+..    .....+....++ .|.  .|......++..+.+..   .|++++-..- . +.-|..+++.+.. 
T Consensus         4 ~~~ilivdd~~----~~~~~l~~~L~~~~~~--~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l-~~~~~g~~~~~~l~~~   76 (140)
T 3lua_A            4 DGTVLLIDYFE----YEREKTKIIFDNIGEY--DFIEVENLKKFYSIFKDLDSITLIIMDIAF-PVEKEGLEVLSAIRNN   76 (140)
T ss_dssp             CCEEEEECSCH----HHHHHHHHHHHHHCCC--EEEEECSHHHHHTTTTTCCCCSEEEECSCS-SSHHHHHHHHHHHHHS
T ss_pred             CCeEEEEeCCH----HHHHHHHHHHHhccCc--cEEEECCHHHHHHHHhcCCCCcEEEEeCCC-CCCCcHHHHHHHHHhC
Confidence            45777787753    356677777777 655  35544443444444444   6888765441 2 3346666766554 


Q ss_pred             ----CCcEEEeCCCC----cccceecCcceeeecCCCCChhHHHHHHHHHhhCHH
Q 017085          289 ----QLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVE  335 (377)
Q Consensus       289 ----g~PvI~s~~~~----~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~  335 (377)
                          .+|+|......    ..+.+..|..+++..+-+  .++|.++|.+++....
T Consensus        77 ~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~--~~~l~~~i~~~~~~~~  129 (140)
T 3lua_A           77 SRTANTPVIIATKSDNPGYRHAALKFKVSDYILKPYP--TKRLENSVRSVLKICQ  129 (140)
T ss_dssp             GGGTTCCEEEEESCCCHHHHHHHHHSCCSEEEESSCC--TTHHHHHHHHHHCC--
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCC--HHHHHHHHHHHHHhcc
Confidence                68887653222    223345577899999988  9999999999887543

>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0

Probab=86.24  E-value=7.6  Score=27.97  Aligned_cols=109  Identities=11%  Similarity=-0.005  Sum_probs=61.2

Q ss_pred             eEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--hcCEEEecCCCCCCccchHHHHHHH-----c
Q 017085          216 VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMA-----F  288 (377)
Q Consensus       216 ~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~--~adv~l~ps~~~~e~~~~~~~Ea~a-----~  288 (377)
                      .+++|+.+..    .....+....++.   ..+.......+..+.+.  ..|++++-..- .+.-|..+++.+.     .
T Consensus         4 ~~iLivdd~~----~~~~~l~~~l~~~---~~v~~~~~~~~a~~~~~~~~~dlvi~D~~l-~~~~g~~~~~~l~~~~~~~   75 (140)
T 3n53_A            4 KKILIIDQQD----FSRIELKNFLDSE---YLVIESKNEKEALEQIDHHHPDLVILDMDI-IGENSPNLCLKLKRSKGLK   75 (140)
T ss_dssp             CEEEEECSCH----HHHHHHHHHHTTT---SEEEEESSHHHHHHHHHHHCCSEEEEETTC-------CHHHHHHTSTTCT
T ss_pred             CEEEEEeCCH----HHHHHHHHHHHhc---ceEEEeCCHHHHHHHHhcCCCCEEEEeCCC-CCCcHHHHHHHHHcCcccC
Confidence            4666776652    3455555555543   24444443344444443  35777754331 3344666676665     4


Q ss_pred             CCcEEEeC-C---CCcccceecCcceeeecCCCCChhHHHHHHHHHhhCH
Q 017085          289 QLPVLGTA-A---GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHV  334 (377)
Q Consensus       289 g~PvI~s~-~---~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~  334 (377)
                      ++|+|... .   ....+.+..|..+++..+.+  .++|..+|..++...
T Consensus        76 ~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~--~~~l~~~i~~~~~~~  123 (140)
T 3n53_A           76 NVPLILLFSSEHKEAIVNGLHSGADDYLTKPFN--RNDLLSRIEIHLRTQ  123 (140)
T ss_dssp             TCCEEEEECC----CTTTTTTCCCSEEEESSCC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHhcCCCeeeeCCCC--HHHHHHHHHHHHhhH
Confidence            67877542 2   22334455677889999988  999999999887544

>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}

Probab=85.54  E-value=5.3  Score=28.80  Aligned_cols=109  Identities=11%  Similarity=0.124  Sum_probs=65.2

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHHc--CC
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAF--QL  290 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a~--g~  290 (377)
                      ..+++|+.+..    .....+....+..|.  .+.......+..+.+..  .|++++-..- .+.-|..+++.+..  .+
T Consensus         4 ~~~Ilivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~al~~~~~~~~dlvllD~~l-~~~~g~~l~~~l~~~~~~   76 (136)
T 2qzj_A            4 QTKILIIDGDK----DNCQKLKGFLEEKGI--SIDLAYNCEEAIGKIFSNKYDLIFLEIIL-SDGDGWTLCKKIRNVTTC   76 (136)
T ss_dssp             CCEEEEECSCH----HHHHHHHHHHHTTTC--EEEEESSHHHHHHHHHHCCCSEEEEESEE-TTEEHHHHHHHHHTTCCC
T ss_pred             CCeEEEEcCCH----HHHHHHHHHHHHCCC--EEEEECCHHHHHHHHHhcCCCEEEEeCCC-CCCCHHHHHHHHccCCCC
Confidence            45777777753    345667777766554  34444433444444433  5777753320 22345666766643  57


Q ss_pred             cEEEeC-CCC---cccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          291 PVLGTA-AGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       291 PvI~s~-~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                      |+|... ...   ..+.+..|..+++..+-+  .+++..++..++.
T Consensus        77 ~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~--~~~L~~~l~~~~~  120 (136)
T 2qzj_A           77 PIVYMTYINEDQSILNALNSGGDDYLIKPLN--LEILYAKVKAILR  120 (136)
T ss_dssp             CEEEEESCCCHHHHHHHHHTTCCEEEESSCC--HHHHHHHHHHHHH
T ss_pred             CEEEEEcCCCHHHHHHHHHcCCcEEEECCCC--HHHHHHHHHHHHH
Confidence            777543 222   233445577899999988  9999999988764

>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}

Probab=85.43  E-value=5.7  Score=29.25  Aligned_cols=111  Identities=10%  Similarity=0.078  Sum_probs=66.0

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhc-CCCCcEEEecCcCCHHHHHHh---cCEEEecCCCCCCccchHHHHHHH---
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQK-KIQDRVHFVNKTLTVAPYLAA---IDVLVQNSQAWGECFGRITIEAMA---  287 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~~~~~~~~~~---adv~l~ps~~~~e~~~~~~~Ea~a---  287 (377)
                      ..+++|+.+..    .....+....++. |. ..+......++....+..   .|++++-..- .+.-|..+++.+.   
T Consensus         3 ~~~iLivdd~~----~~~~~l~~~L~~~~g~-~~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l-~~~~g~~~~~~l~~~~   76 (154)
T 2qsj_A            3 LTVVLIVDDHH----LIRAGAKNLLEGAFSG-MRVEGAETVSDALAFLEADNTVDLILLDVNL-PDAEAIDGLVRLKRFD   76 (154)
T ss_dssp             CEEEEEECSCH----HHHHHHHHHHHHHCTT-EEEEEESSHHHHHHHHHTTCCCSEEEECC-------CHHHHHHHHHHC
T ss_pred             ccEEEEEcCCH----HHHHHHHHHHHhCCCc-eEEEEecCHHHHHHHHhccCCCCEEEEeCCC-CCCchHHHHHHHHHhC
Confidence            46777887753    3566677777766 43 134445544556566654   6887764331 2334566666554   


Q ss_pred             cCCcEEEeCCCC----cccceecCcceeeecCCCCChhHHHHHHHHHhhC
Q 017085          288 FQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH  333 (377)
Q Consensus       288 ~g~PvI~s~~~~----~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~  333 (377)
                      .++|+|......    ..+.+..|..+++..+.+  .++|.++|..++..
T Consensus        77 ~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~--~~~L~~~l~~~~~~  124 (154)
T 2qsj_A           77 PSNAVALISGETDHELIRAALEAGADGFIPKSAD--PQVLIHAVSLILEG  124 (154)
T ss_dssp             TTSEEEEC-----CHHHHHHHHTTCCBBCCTTSC--HHHHHHHHHHHHTT
T ss_pred             CCCeEEEEeCCCCHHHHHHHHHccCCEEEeCCCC--HHHHHHHHHHHHcC
Confidence            367887643222    233344577889988887  99999999988763

>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}

Probab=85.37  E-value=8.2  Score=28.39  Aligned_cols=112  Identities=12%  Similarity=0.128  Sum_probs=67.8

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHH---c
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMA---F  288 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a---~  288 (377)
                      ...+++|+.+..    .....+....+..|.  .+.......+....+..  .|++++-..- .+.-|..+++.+.   .
T Consensus         6 ~~~~iLivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~l~~~~~dlvi~d~~l-~~~~g~~~~~~l~~~~~   78 (154)
T 2rjn_A            6 KNYTVMLVDDEQ----PILNSLKRLIKRLGC--NIITFTSPLDALEALKGTSVQLVISDMRM-PEMGGEVFLEQVAKSYP   78 (154)
T ss_dssp             SCCEEEEECSCH----HHHHHHHHHHHTTTC--EEEEESCHHHHHHHHTTSCCSEEEEESSC-SSSCHHHHHHHHHHHCT
T ss_pred             CCCeEEEEcCCH----HHHHHHHHHHHHcCC--eEEEeCCHHHHHHHHhcCCCCEEEEecCC-CCCCHHHHHHHHHHhCC
Confidence            457788887763    356667777776654  35544444455555543  5777764331 3334556666553   3


Q ss_pred             CCcEEEeC-CCC---cccceecC-cceeeecCCCCChhHHHHHHHHHhhCH
Q 017085          289 QLPVLGTA-AGG---TTEIVVNG-TTGLLHPVGKEGITPLAKNIVKLATHV  334 (377)
Q Consensus       289 g~PvI~s~-~~~---~~e~~~~~-~~g~~~~~~~~~~~~la~~i~~l~~~~  334 (377)
                      .+|+|... ...   ..+.+..+ ..+++..+.+  .+++..+|..++...
T Consensus        79 ~~~ii~ls~~~~~~~~~~~~~~g~~~~~l~kP~~--~~~L~~~i~~~~~~~  127 (154)
T 2rjn_A           79 DIERVVISGYADAQATIDAVNRGKISRFLLKPWE--DEDVFKVVEKGLQLA  127 (154)
T ss_dssp             TSEEEEEECGGGHHHHHHHHHTTCCSEEEESSCC--HHHHHHHHHHHHHHH
T ss_pred             CCcEEEEecCCCHHHHHHHHhccchheeeeCCCC--HHHHHHHHHHHHHHH
Confidence            67877543 222   22233344 6789999887  999999998887543

>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0

Probab=84.50  E-value=9.1  Score=27.36  Aligned_cols=112  Identities=12%  Similarity=0.035  Sum_probs=70.0

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--hcCEEEecCCCCCCccchHHHHHHHc---
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAF---  288 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~--~adv~l~ps~~~~e~~~~~~~Ea~a~---  288 (377)
                      ...+++|+.+..    .....+....++.+.  .+......++..+.+.  ..|++++-..- .+.-|..+++.+..   
T Consensus         6 ~~~~ilivdd~~----~~~~~l~~~L~~~~~--~v~~~~~~~~a~~~l~~~~~dlvi~d~~l-~~~~g~~~~~~l~~~~~   78 (137)
T 3hdg_A            6 VALKILIVEDDT----DAREWLSTIISNHFP--EVWSAGDGEEGERLFGLHAPDVIITDIRM-PKLGGLEMLDRIKAGGA   78 (137)
T ss_dssp             -CCCEEEECSCH----HHHHHHHHHHHTTCS--CEEEESSHHHHHHHHHHHCCSEEEECSSC-SSSCHHHHHHHHHHTTC
T ss_pred             cccEEEEEeCCH----HHHHHHHHHHHhcCc--EEEEECCHHHHHHHHhccCCCEEEEeCCC-CCCCHHHHHHHHHhcCC
Confidence            356788888763    356667777776443  3555554445545543  36777765431 34456666666553   


Q ss_pred             CCcEEEeCCCC----cccceecCcceeeecCCCCChhHHHHHHHHHhhCH
Q 017085          289 QLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHV  334 (377)
Q Consensus       289 g~PvI~s~~~~----~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~  334 (377)
                      .+|+|......    ..+.+..|..+++..+-+  .++|.++|.++++..
T Consensus        79 ~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~--~~~l~~~i~~~~~~~  126 (137)
T 3hdg_A           79 KPYVIVISAFSEMKYFIKAIELGVHLFLPKPIE--PGRLMETLEDFRHIK  126 (137)
T ss_dssp             CCEEEECCCCCCHHHHHHHHHHCCSEECCSSCC--HHHHHHHHHHHHHHH
T ss_pred             CCcEEEEecCcChHHHHHHHhCCcceeEcCCCC--HHHHHHHHHHHHHHH
Confidence            57777653322    223445577889999888  999999999887543

>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0

Probab=84.28  E-value=9.2  Score=27.27  Aligned_cols=113  Identities=12%  Similarity=0.112  Sum_probs=69.8

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh---cCEEEecCCCCCCccchHHHHHHHc--
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA---IDVLVQNSQAWGECFGRITIEAMAF--  288 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~---adv~l~ps~~~~e~~~~~~~Ea~a~--  288 (377)
                      ...+++|+.+..    .....+....++.|.  .+.......+....+..   .|++++-..- .+.-|..+++.+..  
T Consensus         6 ~~~~ilivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~~~~~~~~dlvi~D~~l-~~~~g~~~~~~l~~~~   78 (136)
T 3hdv_A            6 ARPLVLVVDDNA----VNREALILYLKSRGI--DAVGADGAEEARLYLHYQKRIGLMITDLRM-QPESGLDLIRTIRASE   78 (136)
T ss_dssp             -CCEEEEECSCH----HHHHHHHHHHHHTTC--CEEEESSHHHHHHHHHHCTTEEEEEECSCC-SSSCHHHHHHHHHTST
T ss_pred             CCCeEEEECCCH----HHHHHHHHHHHHcCc--eEEEeCCHHHHHHHHHhCCCCcEEEEeccC-CCCCHHHHHHHHHhcC
Confidence            356788888763    456777777877765  35544443444444432   5777764331 34456777777654  


Q ss_pred             --CCcEEEeC-CCC---cccceecCcceeeecCCCCChhHHHHHHHHHhhCHH
Q 017085          289 --QLPVLGTA-AGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVE  335 (377)
Q Consensus       289 --g~PvI~s~-~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~  335 (377)
                        .+|+|... ...   ..+.+..|..+++..+-+  .++|..+|.++.....
T Consensus        79 ~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~--~~~l~~~i~~~~~~~~  129 (136)
T 3hdv_A           79 RAALSIIVVSGDTDVEEAVDVMHLGVVDFLLKPVD--LGKLLELVNKELKIGE  129 (136)
T ss_dssp             TTTCEEEEEESSCCHHHHHHHHHTTCSEEEESSCC--HHHHHHHHHHHHC---
T ss_pred             CCCCCEEEEeCCCChHHHHHHHhCCcceEEeCCCC--HHHHHHHHHHHhcCch
Confidence              36777543 222   233445577899999988  9999999999876543

>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}

Probab=83.73  E-value=11  Score=27.62  Aligned_cols=112  Identities=11%  Similarity=0.078  Sum_probs=66.0

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh---cCEEEecCCCCCCccchHHHHHHH---c
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA---IDVLVQNSQAWGECFGRITIEAMA---F  288 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~---adv~l~ps~~~~e~~~~~~~Ea~a---~  288 (377)
                      ..+++|+.+..    .....+....+. +  ..+.......+..+.+..   .|++++-..- .+.-|..+++.+.   .
T Consensus         4 ~~~ILivdd~~----~~~~~l~~~L~~-~--~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l-~~~~g~~~~~~l~~~~~   75 (151)
T 3kcn_A            4 NERILLVDDDY----SLLNTLKRNLSF-D--FEVTTCESGPEALACIKKSDPFSVIMVDMRM-PGMEGTEVIQKARLISP   75 (151)
T ss_dssp             CCEEEEECSCH----HHHHHHHHHHTT-T--SEEEEESSHHHHHHHHHHSCCCSEEEEESCC-SSSCHHHHHHHHHHHCS
T ss_pred             CCeEEEEeCCH----HHHHHHHHHhcc-C--ceEEEeCCHHHHHHHHHcCCCCCEEEEeCCC-CCCcHHHHHHHHHhcCC
Confidence            45777777752    344555555543 3  245554444555555543   3887764331 3445666666554   3


Q ss_pred             CCcEEEe-CCCC---cccceecC-cceeeecCCCCChhHHHHHHHHHhhCHHH
Q 017085          289 QLPVLGT-AAGG---TTEIVVNG-TTGLLHPVGKEGITPLAKNIVKLATHVER  336 (377)
Q Consensus       289 g~PvI~s-~~~~---~~e~~~~~-~~g~~~~~~~~~~~~la~~i~~l~~~~~~  336 (377)
                      .+|+|.. ....   ..+.+..| ..+++..+-+  .+++..+|..++.....
T Consensus        76 ~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~--~~~L~~~i~~~l~~~~~  126 (151)
T 3kcn_A           76 NSVYLMLTGNQDLTTAMEAVNEGQVFRFLNKPCQ--MSDIKAAINAGIKQYDL  126 (151)
T ss_dssp             SCEEEEEECGGGHHHHHHHHHHTCCSEEEESSCC--HHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEECCCCHHHHHHHHHcCCeeEEEcCCCC--HHHHHHHHHHHHHHHHH
Confidence            6777654 3222   23334456 6789999988  99999999998865443

>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...

Probab=83.55  E-value=9.4  Score=26.82  Aligned_cols=109  Identities=13%  Similarity=0.152  Sum_probs=66.3

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--hcCEEEecCCCCCCccchHHHHHHHc----
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAF----  288 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~--~adv~l~ps~~~~e~~~~~~~Ea~a~----  288 (377)
                      ..+++++.+..    .....+....+..|.. .+.......+....+.  ..|++++-..- .+.-|..+++.+..    
T Consensus         4 ~~~ilivdd~~----~~~~~l~~~l~~~~~~-~v~~~~~~~~a~~~~~~~~~dlvi~D~~l-~~~~g~~l~~~l~~~~~~   77 (128)
T 1jbe_A            4 ELKFLVVDDFS----TMRRIVRNLLKELGFN-NVEEAEDGVDALNKLQAGGYGFVISDWNM-PNMDGLELLKTIRAXXAM   77 (128)
T ss_dssp             TCCEEEECSCH----HHHHHHHHHHHHTTCC-CEEEESSHHHHHHHHTTCCCCEEEEESCC-SSSCHHHHHHHHHC--CC
T ss_pred             ccEEEEECCCH----HHHHHHHHHHHHcCCc-EEEeeCCHHHHHHHHHhcCCCEEEEeCCC-CCCCHHHHHHHHHhhccc
Confidence            45677777752    3566677777766652 3444443344444443  35777754331 33456777777764    


Q ss_pred             -CCcEEEe-CCCC---cccceecCcceeeecCCCCChhHHHHHHHHHh
Q 017085          289 -QLPVLGT-AAGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLA  331 (377)
Q Consensus       289 -g~PvI~s-~~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~  331 (377)
                       .+|+|.. ....   ..+.+..|..+++..+-+  .+++.++|.+++
T Consensus        78 ~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~--~~~l~~~i~~~~  123 (128)
T 1jbe_A           78 SALPVLMVTAEAKKENIIAAAQAGASGYVVKPFT--AATLEEKLNKIF  123 (128)
T ss_dssp             TTCCEEEEESSCCHHHHHHHHHTTCSEEEESSCC--HHHHHHHHHHHH
T ss_pred             CCCcEEEEecCccHHHHHHHHHhCcCceeecCCC--HHHHHHHHHHHH
Confidence             5677654 3322   233344577899999888  999999998765

>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C

Probab=83.36  E-value=9.5  Score=26.71  Aligned_cols=107  Identities=10%  Similarity=0.120  Sum_probs=62.0

Q ss_pred             EEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHH-----cC
Q 017085          217 HAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMA-----FQ  289 (377)
Q Consensus       217 ~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a-----~g  289 (377)
                      +++++.+..    .....+....++.|.  .+.......+..+.+..  .|++++-..- .+.-|..+++.+.     ..
T Consensus         4 ~ILivdd~~----~~~~~l~~~l~~~g~--~v~~~~~~~~al~~l~~~~~dlvllD~~~-p~~~g~~~~~~l~~~~~~~~   76 (122)
T 3gl9_A            4 KVLLVDDSA----VLRKIVSFNLKKEGY--EVIEAENGQIALEKLSEFTPDLIVLXIMM-PVMDGFTVLKKLQEKEEWKR   76 (122)
T ss_dssp             EEEEECSCH----HHHHHHHHHHHHTTC--EEEEESSHHHHHHHHTTBCCSEEEECSCC-SSSCHHHHHHHHHTSTTTTT
T ss_pred             eEEEEeCCH----HHHHHHHHHHHHCCc--EEEEeCCHHHHHHHHHhcCCCEEEEeccC-CCCcHHHHHHHHHhcccccC
Confidence            455565542    345556666666554  34433333344444432  5777653331 3445677777774     35


Q ss_pred             CcEEEeC-CCCc---ccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          290 LPVLGTA-AGGT---TEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       290 ~PvI~s~-~~~~---~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                      +|+|... .+..   ......|..+++..|.+  .+++..++.+++.
T Consensus        77 ~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~~--~~~L~~~i~~~l~  121 (122)
T 3gl9_A           77 IPVIVLTAKGGEEDESLALSLGARKVMRKPFS--PSQFIEEVKHLLN  121 (122)
T ss_dssp             SCEEEEESCCSHHHHHHHHHTTCSEEEESSCC--HHHHHHHHHHHHC
T ss_pred             CCEEEEecCCchHHHHHHHhcChhhhccCCCC--HHHHHHHHHHHhc
Confidence            7877543 3322   22344577899999988  9999999988764

>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0

Probab=83.21  E-value=11  Score=27.11  Aligned_cols=111  Identities=13%  Similarity=0.057  Sum_probs=65.9

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHHc----
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAF----  288 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a~----  288 (377)
                      ..+++|+.+..    .....+....++.|.  .|.......+..+.+..  .|++++-..- .+.-|..+++.+..    
T Consensus         4 ~~~iLivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~al~~~~~~~~dlvl~D~~l-p~~~g~~~~~~lr~~~~~   76 (136)
T 3t6k_A            4 PHTLLIVDDDD----TVAEMLELVLRGAGY--EVRRAASGEEALQQIYKNLPDALICDVLL-PGIDGYTLCKRVRQHPLT   76 (136)
T ss_dssp             CCEEEEECSCH----HHHHHHHHHHHHTTC--EEEEESSHHHHHHHHHHSCCSEEEEESCC-SSSCHHHHHHHHHHSGGG
T ss_pred             CCEEEEEeCCH----HHHHHHHHHHHHCCC--EEEEeCCHHHHHHHHHhCCCCEEEEeCCC-CCCCHHHHHHHHHcCCCc
Confidence            34666776652    345666666666654  34444333344444433  5777754331 34456677766643    


Q ss_pred             -CCcEEEeC-CCCc---ccceecCcceeeecCCCCChhHHHHHHHHHhhCH
Q 017085          289 -QLPVLGTA-AGGT---TEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHV  334 (377)
Q Consensus       289 -g~PvI~s~-~~~~---~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~  334 (377)
                       .+|+|... .+..   .+.+..|..+++..+-+  .++|..+|.+++...
T Consensus        77 ~~~pii~~t~~~~~~~~~~~~~~ga~~~l~KP~~--~~~L~~~i~~~l~~~  125 (136)
T 3t6k_A           77 KTLPILMLTAQGDISAKIAGFEAGANDYLAKPFE--PQELVYRVKNILART  125 (136)
T ss_dssp             TTCCEEEEECTTCHHHHHHHHHHTCSEEEETTCC--HHHHHHHHHHHHHC-
T ss_pred             CCccEEEEecCCCHHHHHHHHhcCcceEEeCCCC--HHHHHHHHHHHHhcc
Confidence             57877543 3322   23344577899999988  999999999887643

>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}

Probab=83.17  E-value=11  Score=27.33  Aligned_cols=111  Identities=16%  Similarity=0.123  Sum_probs=63.9

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHH----
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMA----  287 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a----  287 (377)
                      ...+++|+.+..    .....+....++.|.  .+......++..+.+..  .|++++-..- .+.-|..+++.+.    
T Consensus        13 ~~~~iLivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~al~~~~~~~~dlvl~D~~m-p~~~g~~~~~~lr~~~~   85 (143)
T 3m6m_D           13 RSMRMLVADDHE----ANRMVLQRLLEKAGH--KVLCVNGAEQVLDAMAEEDYDAVIVDLHM-PGMNGLDMLKQLRVMQA   85 (143)
T ss_dssp             --CEEEEECSSH----HHHHHHHHHHHC--C--EEEEESSHHHHHHHHHHSCCSEEEEESCC-SSSCHHHHHHHHHHHHH
T ss_pred             ccceEEEEeCCH----HHHHHHHHHHHHcCC--eEEEeCCHHHHHHHHhcCCCCEEEEeCCC-CCCCHHHHHHHHHhchh
Confidence            346777777652    345666666666653  34444433444444443  5777753321 3445667777664    


Q ss_pred             ---cCCcEEEeCCCCc----ccceecCcceeeecCCCCChhHHHHHHHHHhhC
Q 017085          288 ---FQLPVLGTAAGGT----TEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH  333 (377)
Q Consensus       288 ---~g~PvI~s~~~~~----~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~  333 (377)
                         ..+|+|+......    .+....|..+++..+-+  .+++.++|.++...
T Consensus        86 ~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~~--~~~L~~~l~~~~~~  136 (143)
T 3m6m_D           86 SGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVV--AAKLLDTLADLAVS  136 (143)
T ss_dssp             TTCCCCCEEEEESCCCHHHHHHHHHTTCSEEEESSCC--HHHHHHHHHHHC--
T ss_pred             ccCCCCeEEEEeCCCCHHHHHHHHHcChhheeeCCCC--HHHHHHHHHHHHHh
Confidence               2367776543322    23344577899999988  99999999887643

>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}

Probab=83.11  E-value=12  Score=27.51  Aligned_cols=111  Identities=11%  Similarity=0.119  Sum_probs=62.1

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHH---cC
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMA---FQ  289 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a---~g  289 (377)
                      ..+++|+.+..    .....+....++.|.  .|......++..+.+..  .|++++-..- .+.-|..+++.+.   ..
T Consensus        14 ~~~ILivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~l~~~~~dlvi~D~~l-~~~~g~~~~~~l~~~~~~   86 (153)
T 3hv2_A           14 RPEILLVDSQE----VILQRLQQLLSPLPY--TLHFARDATQALQLLASREVDLVISAAHL-PQMDGPTLLARIHQQYPS   86 (153)
T ss_dssp             CCEEEEECSCH----HHHHHHHHHHTTSSC--EEEEESSHHHHHHHHHHSCCSEEEEESCC-SSSCHHHHHHHHHHHCTT
T ss_pred             CceEEEECCCH----HHHHHHHHHhcccCc--EEEEECCHHHHHHHHHcCCCCEEEEeCCC-CcCcHHHHHHHHHhHCCC
Confidence            34566666542    244555555555543  34444333344444433  4676654331 3444566665554   46


Q ss_pred             CcEEEeCCCC----cccceecC-cceeeecCCCCChhHHHHHHHHHhhCH
Q 017085          290 LPVLGTAAGG----TTEIVVNG-TTGLLHPVGKEGITPLAKNIVKLATHV  334 (377)
Q Consensus       290 ~PvI~s~~~~----~~e~~~~~-~~g~~~~~~~~~~~~la~~i~~l~~~~  334 (377)
                      +|+|......    ..+.+..| ..+++..+-+  .++|..+|.+++...
T Consensus        87 ~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~--~~~l~~~i~~~l~~~  134 (153)
T 3hv2_A           87 TTRILLTGDPDLKLIAKAINEGEIYRYLSKPWD--DQELLLALRQALEHQ  134 (153)
T ss_dssp             SEEEEECCCCCHHHHHHHHHTTCCSEEECSSCC--HHHHHHHHHHHHHHH
T ss_pred             CeEEEEECCCCHHHHHHHHhCCCcceEEeCCCC--HHHHHHHHHHHHHHh
Confidence            7777553322    22334445 6789999888  999999999887543

>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*

Probab=83.07  E-value=9.9  Score=26.68  Aligned_cols=109  Identities=12%  Similarity=0.171  Sum_probs=65.5

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHH---cC
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMA---FQ  289 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a---~g  289 (377)
                      +.+++++.+..    .....+.......|.  .+.......+..+.+..  .|++++-..- ...-|..+++.+.   ..
T Consensus         3 ~~~ilivdd~~----~~~~~l~~~l~~~~~--~v~~~~~~~~~~~~~~~~~~dlvi~D~~l-~~~~g~~~~~~l~~~~~~   75 (126)
T 1dbw_A            3 DYTVHIVDDEE----PVRKSLAFMLTMNGF--AVKMHQSAEAFLAFAPDVRNGVLVTDLRM-PDMSGVELLRNLGDLKIN   75 (126)
T ss_dssp             CCEEEEEESSH----HHHHHHHHHHHHTTC--EEEEESCHHHHHHHGGGCCSEEEEEECCS-TTSCHHHHHHHHHHTTCC
T ss_pred             CCEEEEEcCCH----HHHHHHHHHHHhCCc--EEEEeCCHHHHHHHHhcCCCCEEEEECCC-CCCCHHHHHHHHHhcCCC
Confidence            35677777753    356667777776654  34444433444444443  5777653320 2334566666654   36


Q ss_pred             CcEEEe-CCCC---cccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          290 LPVLGT-AAGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       290 ~PvI~s-~~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                      +|+|.. ....   ..+.+..|..+++..+.+  .+++.++|.+++.
T Consensus        76 ~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~--~~~l~~~i~~~~~  120 (126)
T 1dbw_A           76 IPSIVITGHGDVPMAVEAMKAGAVDFIEKPFE--DTVIIEAIERASE  120 (126)
T ss_dssp             CCEEEEECTTCHHHHHHHHHTTCSEEEESSCC--HHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHhCHHHheeCCCC--HHHHHHHHHHHHH
Confidence            787754 3332   233345577899999988  9999999988764

>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}

Probab=83.06  E-value=10  Score=26.78  Aligned_cols=111  Identities=14%  Similarity=0.140  Sum_probs=65.5

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHHc---
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAF---  288 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a~---  288 (377)
                      ...+++|+.+..    .....+....++.|.  .+......++..+.+..  .|++++-..- .+.-|..+++.+..   
T Consensus         6 ~~~~ilivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~l~~~~~dlvi~d~~l-~~~~g~~~~~~l~~~~~   78 (130)
T 3eod_A            6 VGKQILIVEDEQ----VFRSLLDSWFSSLGA--TTVLAADGVDALELLGGFTPDLMICDIAM-PRMNGLKLLEHIRNRGD   78 (130)
T ss_dssp             TTCEEEEECSCH----HHHHHHHHHHHHTTC--EEEEESCHHHHHHHHTTCCCSEEEECCC------CHHHHHHHHHTTC
T ss_pred             CCCeEEEEeCCH----HHHHHHHHHHHhCCc--eEEEeCCHHHHHHHHhcCCCCEEEEecCC-CCCCHHHHHHHHHhcCC
Confidence            456788887753    356677777777764  35444433444455533  5777764331 34456667766543   


Q ss_pred             CCcEEEeC-CCC---cccceecCcceeeecCC-CCChhHHHHHHHHHhhC
Q 017085          289 QLPVLGTA-AGG---TTEIVVNGTTGLLHPVG-KEGITPLAKNIVKLATH  333 (377)
Q Consensus       289 g~PvI~s~-~~~---~~e~~~~~~~g~~~~~~-~~~~~~la~~i~~l~~~  333 (377)
                      .+|+|... ...   ..+.+..|..+++..|- +  .+.+.+++.+++..
T Consensus        79 ~~~ii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~--~~~l~~~i~~~l~~  126 (130)
T 3eod_A           79 QTPVLVISATENMADIAKALRLGVEDVLLKPVKD--LNRLREMVFACLYP  126 (130)
T ss_dssp             CCCEEEEECCCCHHHHHHHHHHCCSEEEESCC-----CHHHHHHHHHHC-
T ss_pred             CCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCc--HHHHHHHHHHHhch
Confidence            56776543 222   23345567888999987 6  89999999988754

>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}

Probab=82.68  E-value=11  Score=27.00  Aligned_cols=112  Identities=17%  Similarity=0.178  Sum_probs=70.0

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHh-cCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHHc--
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQ-KKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAF--  288 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a~--  288 (377)
                      ...+++|+.+..    .....+....++ .|.. .+......++....+..  .|++++-..- .+.-|..+++.+..  
T Consensus         7 ~~~~iLivdd~~----~~~~~l~~~L~~~~~~~-~v~~~~~~~~a~~~l~~~~~dlii~d~~l-~~~~g~~~~~~l~~~~   80 (143)
T 3cnb_A            7 NDFSILIIEDDK----EFADMLTQFLENLFPYA-KIKIAYNPFDAGDLLHTVKPDVVMLDLMM-VGMDGFSICHRIKSTP   80 (143)
T ss_dssp             --CEEEEECSCH----HHHHHHHHHHHHHCTTC-EEEEECSHHHHHHHHHHTCCSEEEEETTC-TTSCHHHHHHHHHTST
T ss_pred             CCceEEEEECCH----HHHHHHHHHHHhccCcc-EEEEECCHHHHHHHHHhcCCCEEEEeccc-CCCcHHHHHHHHHhCc
Confidence            456788887753    356677777777 6652 25555544555555543  6777765431 33456677777654  


Q ss_pred             ---CCcEEEe-CCCCc---ccceecCcceeeecCCCCChhHHHHHHHHHhhC
Q 017085          289 ---QLPVLGT-AAGGT---TEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH  333 (377)
Q Consensus       289 ---g~PvI~s-~~~~~---~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~  333 (377)
                         .+|+|+. .....   .+.+..|..+++..+.+  .++|..+|.+++..
T Consensus        81 ~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~--~~~l~~~i~~~~~~  130 (143)
T 3cnb_A           81 ATANIIVIAMTGALTDDNVSRIVALGAETCFGKPLN--FTLLEKTIKQLVEQ  130 (143)
T ss_dssp             TTTTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCC--HHHHHHHHHHHHHT
T ss_pred             cccCCcEEEEeCCCCHHHHHHHHhcCCcEEEeCCCC--HHHHHHHHHHHHHh
Confidence               5677754 33322   33344577889999887  99999999988753

>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}

Probab=82.50  E-value=12  Score=27.25  Aligned_cols=111  Identities=16%  Similarity=0.199  Sum_probs=69.4

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHH----
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMA----  287 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a----  287 (377)
                      .+.+++||-+..    ..+.-+....++.|.. .+.....-.+..+.+..  .|++++=-. -.+.-|..+++.+-    
T Consensus        11 k~~rILiVDD~~----~~r~~l~~~L~~~G~~-~v~~a~~g~~al~~~~~~~~DlillD~~-MP~mdG~el~~~ir~~~~   84 (134)
T 3to5_A           11 KNMKILIVDDFS----TMRRIVKNLLRDLGFN-NTQEADDGLTALPMLKKGDFDFVVTDWN-MPGMQGIDLLKNIRADEE   84 (134)
T ss_dssp             TTCCEEEECSCH----HHHHHHHHHHHHTTCC-CEEEESSHHHHHHHHHHHCCSEEEEESC-CSSSCHHHHHHHHHHSTT
T ss_pred             CCCEEEEEeCCH----HHHHHHHHHHHHcCCc-EEEEECCHHHHHHHHHhCCCCEEEEcCC-CCCCCHHHHHHHHHhCCC
Confidence            457788887653    4567777788888764 34433332333444433  577774222 02335777777774    


Q ss_pred             -cCCcEEEeC-CCCcc---cceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          288 -FQLPVLGTA-AGGTT---EIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       288 -~g~PvI~s~-~~~~~---e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                       ..+|||.-. .+...   +....|.++++..|-+  .++|.++|.++++
T Consensus        85 ~~~ipvI~lTa~~~~~~~~~~~~~Ga~~yl~KP~~--~~~L~~~i~~~l~  132 (134)
T 3to5_A           85 LKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFT--AATLKEKLDKIFE  132 (134)
T ss_dssp             TTTCCEEEEESSCCHHHHHHHHHTTCCEEEESSCC--HHHHHHHHHHHCC
T ss_pred             CCCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCC--HHHHHHHHHHHHh
Confidence             468888543 33322   2344578899999988  9999999988763

>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}

Probab=82.33  E-value=7.2  Score=26.72  Aligned_cols=107  Identities=8%  Similarity=0.065  Sum_probs=63.2

Q ss_pred             EEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--hcCEEEecCCCCCCccchHHHHHHH-----cC
Q 017085          217 HAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMA-----FQ  289 (377)
Q Consensus       217 ~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~--~adv~l~ps~~~~e~~~~~~~Ea~a-----~g  289 (377)
                      +++++.+..    .....+....+..|.  .+......++....+.  ..|++++-... .+.-|..+++.+.     ..
T Consensus         3 ~iliv~~~~----~~~~~l~~~l~~~g~--~v~~~~~~~~~~~~l~~~~~dlii~d~~~-~~~~~~~~~~~l~~~~~~~~   75 (119)
T 2j48_A            3 HILLLEEED----EAATVVCEMLTAAGF--KVIWLVDGSTALDQLDLLQPIVILMAWPP-PDQSCLLLLQHLREHQADPH   75 (119)
T ss_dssp             EEEEECCCH----HHHHHHHHHHHHTTC--EEEEESCHHHHHHHHHHHCCSEEEEECST-TCCTHHHHHHHHHHTCCCSS
T ss_pred             EEEEEeCCH----HHHHHHHHHHHhCCc--EEEEecCHHHHHHHHHhcCCCEEEEecCC-CCCCHHHHHHHHHhccccCC
Confidence            456666652    355667777776664  4554444344444443  35777754331 3344666777765     45


Q ss_pred             CcEEEe-CCCCcccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          290 LPVLGT-AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       290 ~PvI~s-~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                      +|+|.. +.....+....|..+++..+-+  .+++...+.+++.
T Consensus        76 ~~ii~~~~~~~~~~~~~~g~~~~l~kp~~--~~~l~~~l~~~~~  117 (119)
T 2j48_A           76 PPLVLFLGEPPVDPLLTAQASAILSKPLD--PQLLLTTLQGLCP  117 (119)
T ss_dssp             CCCEEEESSCCSSHHHHHHCSEECSSCST--THHHHHHHHTTCC
T ss_pred             CCEEEEeCCCCchhhhhcCHHHhccCCCC--HHHHHHHHHHHhc
Confidence            776653 3322224555567788888877  8999988876653

>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0

Probab=82.04  E-value=11  Score=26.46  Aligned_cols=110  Identities=8%  Similarity=0.045  Sum_probs=66.5

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHHc----
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAF----  288 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a~----  288 (377)
                      ..+++|+.+..    .....+....++.|.  .|......++..+.+..  .|++++-..- .+.-|..+++.+..    
T Consensus         3 ~~~ilivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~l~~~~~dlii~D~~l-~~~~g~~~~~~l~~~~~~   75 (127)
T 3i42_A            3 LQQALIVEDYQ----AAAETFKELLEMLGF--QADYVMSGTDALHAMSTRGYDAVFIDLNL-PDTSGLALVKQLRALPME   75 (127)
T ss_dssp             CEEEEEECSCH----HHHHHHHHHHHHTTE--EEEEESSHHHHHHHHHHSCCSEEEEESBC-SSSBHHHHHHHHHHSCCS
T ss_pred             cceEEEEcCCH----HHHHHHHHHHHHcCC--CEEEECCHHHHHHHHHhcCCCEEEEeCCC-CCCCHHHHHHHHHhhhcc
Confidence            35677777753    356677777777765  35544444455455543  5777654331 34456677776643    


Q ss_pred             -CCcEEEeC-CCC--cccceecCcceeeecCCCCChhHHHHHHHHHhhC
Q 017085          289 -QLPVLGTA-AGG--TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH  333 (377)
Q Consensus       289 -g~PvI~s~-~~~--~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~  333 (377)
                       .+|+|... ...  ....+..|..+++..|-+  .++|.+++......
T Consensus        76 ~~~~ii~~s~~~~~~~~~~~~~g~~~~l~KP~~--~~~L~~~i~~~~~~  122 (127)
T 3i42_A           76 KTSKFVAVSGFAKNDLGKEACELFDFYLEKPID--IASLEPILQSIEGH  122 (127)
T ss_dssp             SCCEEEEEECC-CTTCCHHHHHHCSEEEESSCC--HHHHHHHHHHHC--
T ss_pred             CCCCEEEEECCcchhHHHHHHHhhHHheeCCCC--HHHHHHHHHHhhcc
Confidence             47777542 221  133444567889999988  99999999887654

>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}

Probab=81.96  E-value=11  Score=26.54  Aligned_cols=109  Identities=13%  Similarity=0.096  Sum_probs=64.2

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH---hcCEEEecCCCCCC-ccchHHHHHHH--
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA---AIDVLVQNSQAWGE-CFGRITIEAMA--  287 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~---~adv~l~ps~~~~e-~~~~~~~Ea~a--  287 (377)
                      ...+++|+.+..    .....+.......|.  .+......++..+.+.   ..|++++-..- .+ .-|..+++.+.  
T Consensus         4 ~~~~ilivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l-~~~~~g~~~~~~l~~~   76 (132)
T 2rdm_A            4 EAVTILLADDEA----ILLLDFESTLTDAGF--LVTAVSSGAKAIEMLKSGAAIDGVVTDIRF-CQPPDGWQVARVAREI   76 (132)
T ss_dssp             SSCEEEEECSSH----HHHHHHHHHHHHTTC--EEEEESSHHHHHHHHHTTCCCCEEEEESCC-SSSSCHHHHHHHHHHH
T ss_pred             CCceEEEEcCcH----HHHHHHHHHHHHcCC--EEEEECCHHHHHHHHHcCCCCCEEEEeeeC-CCCCCHHHHHHHHHhc
Confidence            346778887753    356667777776665  3544444345555554   35887764431 22 34566666554  


Q ss_pred             -cCCcEEEe-CCCCcc---cceecCcceeeecCCCCChhHHHHHHHHHhhC
Q 017085          288 -FQLPVLGT-AAGGTT---EIVVNGTTGLLHPVGKEGITPLAKNIVKLATH  333 (377)
Q Consensus       288 -~g~PvI~s-~~~~~~---e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~  333 (377)
                       ..+|+|.. ......   ..+..  .+++..+-+  .+++..+|.+++..
T Consensus        77 ~~~~~ii~~s~~~~~~~~~~~~~~--~~~l~kP~~--~~~l~~~i~~~~~~  123 (132)
T 2rdm_A           77 DPNMPIVYISGHAALEWASNGVPD--SIILEKPFT--SAQLITAVSQLLNA  123 (132)
T ss_dssp             CTTCCEEEEESSCCTTHHHHSCTT--CEEEESSCC--HHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCccHHHHHhhcCC--cceEeCCCC--HHHHHHHHHHHHhc
Confidence             36787754 322221   11212  268888887  99999999888763

>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A

Probab=81.75  E-value=10  Score=26.47  Aligned_cols=108  Identities=11%  Similarity=0.083  Sum_probs=66.2

Q ss_pred             eEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--hcCEEEecCCCCC-CccchHHHHHHH-----
Q 017085          216 VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWG-ECFGRITIEAMA-----  287 (377)
Q Consensus       216 ~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~--~adv~l~ps~~~~-e~~~~~~~Ea~a-----  287 (377)
                      .+++++.+..    .....+....++.|.  .+.......+..+.+.  ..|++++-..- . ..-|..+++.+.     
T Consensus         6 ~~ilivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~~~~~~~dlvi~d~~~-~~~~~g~~~~~~l~~~~~~   78 (127)
T 2gkg_A            6 KKILIVESDT----ALSATLRSALEGRGF--TVDETTDGKGSVEQIRRDRPDLVVLAVDL-SAGQNGYLICGKLKKDDDL   78 (127)
T ss_dssp             CEEEEECSCH----HHHHHHHHHHHHHTC--EEEEECCHHHHHHHHHHHCCSEEEEESBC-GGGCBHHHHHHHHHHSTTT
T ss_pred             CeEEEEeCCH----HHHHHHHHHHHhcCc--eEEEecCHHHHHHHHHhcCCCEEEEeCCC-CCCCCHHHHHHHHhcCccc
Confidence            4667777652    356667777776665  3544444344444443  35777754331 2 334566776664     


Q ss_pred             cCCcEEEeCCCCc----ccceecCcceeeecCCCCChhHHHHHHHHHhhC
Q 017085          288 FQLPVLGTAAGGT----TEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH  333 (377)
Q Consensus       288 ~g~PvI~s~~~~~----~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~  333 (377)
                      ..+|+|.. ....    .+....|..+++..+-+  .+++...|.+++..
T Consensus        79 ~~~~ii~~-~~~~~~~~~~~~~~g~~~~l~kp~~--~~~l~~~i~~~~~~  125 (127)
T 2gkg_A           79 KNVPIVII-GNPDGFAQHRKLKAHADEYVAKPVD--ADQLVERAGALIGF  125 (127)
T ss_dssp             TTSCEEEE-ECGGGHHHHHHSTTCCSEEEESSCC--HHHHHHHHHHHHCC
T ss_pred             cCCCEEEE-ecCCchhHHHHHHhCcchheeCCCC--HHHHHHHHHHHHcC
Confidence            46888876 3322    23344567889999887  99999999887653

>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}

Probab=81.39  E-value=11  Score=27.06  Aligned_cols=111  Identities=10%  Similarity=0.056  Sum_probs=66.4

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHH---cC
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMA---FQ  289 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a---~g  289 (377)
                      ..+++|+.+..    .....+....++.|.  .+.......+..+.+..  .|++++-..  .+.-|..+++.+.   ..
T Consensus         4 ~~~iLivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~l~~~~~dlvi~d~~--~~~~g~~~~~~l~~~~~~   75 (142)
T 2qxy_A            4 TPTVMVVDESR----ITFLAVKNALEKDGF--NVIWAKNEQEAFTFLRREKIDLVFVDVF--EGEESLNLIRRIREEFPD   75 (142)
T ss_dssp             CCEEEEECSCH----HHHHHHHHHHGGGTC--EEEEESSHHHHHHHHTTSCCSEEEEECT--TTHHHHHHHHHHHHHCTT
T ss_pred             CCeEEEEeCCH----HHHHHHHHHHHhCCC--EEEEECCHHHHHHHHhccCCCEEEEeCC--CCCcHHHHHHHHHHHCCC
Confidence            45677777653    356667777776664  35544443444444433  577765432  3434555565553   35


Q ss_pred             CcEEEeC-CCC---cccceecCcceeeecCCCCChhHHHHHHHHHhhCHH
Q 017085          290 LPVLGTA-AGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVE  335 (377)
Q Consensus       290 ~PvI~s~-~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~  335 (377)
                      +|+|... ...   ..+....|..+++..+.+  .++|..+|.+++....
T Consensus        76 ~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~--~~~l~~~i~~~~~~~~  123 (142)
T 2qxy_A           76 TKVAVLSAYVDKDLIINSVKAGAVDYILKPFR--LDYLLERVKKIISSTP  123 (142)
T ss_dssp             CEEEEEESCCCHHHHHHHHHHTCSCEEESSCC--HHHHHHHHHHHHHC--
T ss_pred             CCEEEEECCCCHHHHHHHHHCCcceeEeCCCC--HHHHHHHHHHHHhhcc
Confidence            7877543 322   223344577889999887  9999999999886543

>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B

Probab=80.65  E-value=13  Score=26.46  Aligned_cols=109  Identities=11%  Similarity=0.183  Sum_probs=64.4

Q ss_pred             eEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh-------cCEEEecCCCCCCccchHHHHHHHc
Q 017085          216 VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA-------IDVLVQNSQAWGECFGRITIEAMAF  288 (377)
Q Consensus       216 ~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~-------adv~l~ps~~~~e~~~~~~~Ea~a~  288 (377)
                      .+++|+.+..    .....+....+..|.. .+.......+..+.+..       .|++++=..- .+.-|..+++.+..
T Consensus         3 ~~ILivdD~~----~~~~~l~~~L~~~g~~-~v~~~~~~~~al~~~~~~~~~~~~~dlvllD~~m-p~~~G~~~~~~lr~   76 (133)
T 2r25_B            3 VKILVVEDNH----VNQEVIKRMLNLEGIE-NIELACDGQEAFDKVKELTSKGENYNMIFMDVQM-PKVDGLLSTKMIRR   76 (133)
T ss_dssp             SCEEEECSCH----HHHHHHHHHHHHTTCC-CEEEESSHHHHHHHHHHHHHHTCCCSEEEECSCC-SSSCHHHHHHHHHH
T ss_pred             ceEEEEcCCH----HHHHHHHHHHHHcCCc-eEEEECCHHHHHHHHHHHHhcCCCCCEEEEeCCC-CCCChHHHHHHHHh
Confidence            3566666652    3456667777665543 34444433344444433       5887754330 23346666766642


Q ss_pred             ----CCcEEEe-CCCCc---ccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          289 ----QLPVLGT-AAGGT---TEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       289 ----g~PvI~s-~~~~~---~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                          ..|+|.. .....   .+....|..+++..|-+  .+++.++|.+++.
T Consensus        77 ~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~KP~~--~~~L~~~l~~~~~  126 (133)
T 2r25_B           77 DLGYTSPIVALTAFADDSNIKECLESGMNGFLSKPIK--RPKLKTILTEFCA  126 (133)
T ss_dssp             HSCCCSCEEEEESCCSHHHHHHHHHTTCSEEEESSCC--HHHHHHHHHHHCT
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHcCCCEEEeCCCC--HHHHHHHHHHHHH
Confidence                4677754 33332   23344577899999988  9999999988764

>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}

Probab=80.50  E-value=11  Score=26.24  Aligned_cols=76  Identities=14%  Similarity=0.338  Sum_probs=48.3

Q ss_pred             eEEE-EEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHH--cCCcE
Q 017085          216 VHAV-IIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMA--FQLPV  292 (377)
Q Consensus       216 ~~l~-i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a--~g~Pv  292 (377)
                      .+++ ++|.|.... -..+++++.+++.|++-.|...+. .++...+..+|+++....  .. +-..-++..+  .++||
T Consensus         5 mkIlvvC~~G~~TS-ll~~kl~~~~~~~gi~~~i~~~~~-~~~~~~~~~~D~Ii~t~~--l~-~~~~~~~~~~~~~~~pv   79 (109)
T 2l2q_A            5 MNILLVCGAGMSTS-MLVQRIEKYAKSKNINATIEAIAE-TRLSEVVDRFDVVLLAPQ--SR-FNKKRLEEITKPKGIPI   79 (109)
T ss_dssp             EEEEEESSSSCSSC-HHHHHHHHHHHHHTCSEEEEEECS-TTHHHHTTTCSEEEECSC--CS-SHHHHHHHHHHHHTCCE
T ss_pred             eEEEEECCChHhHH-HHHHHHHHHHHHCCCCeEEEEecH-HHHHhhcCCCCEEEECCc--cH-HHHHHHHHHhcccCCCE
Confidence            4544 456665555 577899999999988644544443 577777889999887654  21 1123333332  58999


Q ss_pred             EEeC
Q 017085          293 LGTA  296 (377)
Q Consensus       293 I~s~  296 (377)
                      +.-+
T Consensus        80 ~~I~   83 (109)
T 2l2q_A           80 EIIN   83 (109)
T ss_dssp             EECC
T ss_pred             EEEC
Confidence            8754

>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A

Probab=80.28  E-value=5.5  Score=29.02  Aligned_cols=110  Identities=15%  Similarity=0.120  Sum_probs=63.3

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcC-CCCcEEEecCc-CCHHHHH---HhcCEEEecCCCCCCccchHHHHHHHc
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKK-IQDRVHFVNKT-LTVAPYL---AAIDVLVQNSQAWGECFGRITIEAMAF  288 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~g~~-~~~~~~~---~~adv~l~ps~~~~e~~~~~~~Ea~a~  288 (377)
                      +..+++|+.+..    .....+...+++.| .  .+...... +.+..+.   ...|++++-..- .+.-|..+++.+..
T Consensus        19 ~~~~ilivdd~~----~~~~~l~~~L~~~g~~--~v~~~~~~~~~~~~~~~~~~~~dlvi~D~~l-~~~~g~~~~~~l~~   91 (146)
T 4dad_A           19 GMINILVASEDA----SRLAHLARLVGDAGRY--RVTRTVGRAAQIVQRTDGLDAFDILMIDGAA-LDTAELAAIEKLSR   91 (146)
T ss_dssp             GGCEEEEECSCH----HHHHHHHHHHHHHCSC--EEEEECCCHHHHTTCHHHHTTCSEEEEECTT-CCHHHHHHHHHHHH
T ss_pred             CCCeEEEEeCCH----HHHHHHHHHHhhCCCe--EEEEeCCHHHHHHHHHhcCCCCCEEEEeCCC-CCccHHHHHHHHHH
Confidence            356777776652    34566666666665 3  23333322 2222222   346777764331 33345556655543


Q ss_pred             ---CCcEEEeC-CCC---cccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          289 ---QLPVLGTA-AGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       289 ---g~PvI~s~-~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                         .+|+|.-. ...   ..+.+..|..+++..+-+  .++|..+|.+++.
T Consensus        92 ~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~--~~~L~~~i~~~~~  140 (146)
T 4dad_A           92 LHPGLTCLLVTTDASSQTLLDAMRAGVRDVLRWPLE--PRALDDALKRAAA  140 (146)
T ss_dssp             HCTTCEEEEEESCCCHHHHHHHHTTTEEEEEESSCC--HHHHHHHHHHHHH
T ss_pred             hCCCCcEEEEeCCCCHHHHHHHHHhCCceeEcCCCC--HHHHHHHHHHHHh
Confidence               57777543 222   223345577889999888  9999999988765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	377
d1rzua_	477	c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte	2e-12
d2bisa1	437	c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro	5e-12
d2iw1a1	370	c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt	3e-07
d1uqta_	456	c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA	4e-05

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 66.2 bits (160), Expect = 2e-12
 Identities = 40/301 (13%), Positives = 94/301 (31%), Gaps = 34/301 (11%)

Query: 88  LWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNS 147
           + + +++      L     L  V+ +  +  +TAE+        +  +    + +  G  
Sbjct: 191 IEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEF-GMGLEGVIGSRAHVLHGIVNGID 249

Query: 148 KELMEVAEDNVA-----------KRVLREHVRESLGVRNED-LLFAIINSVSRGKGQDLF 195
            ++   A D++            + + ++ V E   + ++   LF +I+ ++  KG DL 
Sbjct: 250 ADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLM 309

Query: 196 LHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL 255
             +  E + L             V++G+        E  L     +   +  V       
Sbjct: 310 AEAVDEIVSL---------GGRLVVLGAGD---VALEGALLAAASRHHGRVGVAIGYNEP 357

Query: 256 TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPV 315
                 A  D       +  E  G   + A+ +    +    GG  + V++     L   
Sbjct: 358 LSHLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASK 415

Query: 316 GKEGIT-------PLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEV 368
              G+         L + I +   +        +     +K        A   A +  ++
Sbjct: 416 AATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSDVSWEKSAGLYAALYSQL 475

Query: 369 L 369
           +
Sbjct: 476 I 476

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

 Score = 64.8 bits (156), Expect = 5e-12
 Identities = 50/287 (17%), Positives = 85/287 (29%), Gaps = 17/287 (5%)

Query: 89  WWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTA--EYWKNRTRERLRIKMPDTYVVHLGN 146
            +     G      Y    P   G  I   VT     +        R        V  G 
Sbjct: 160 AFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGI 219

Query: 147 SKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELI 206
                  +    ++   ++ +    G+        I       KG D+ L +       I
Sbjct: 220 DCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIE-----I 274

Query: 207 KEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDV 266
              K E   +  +IIG        +    R+   +      +  +     V     ++D 
Sbjct: 275 LSSKKEFQEMRFIIIGKGDPELEGW---ARSLEEKHGNVKVITEMLSREFVRELYGSVDF 331

Query: 267 LVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKN 326
           ++  S      FG + +EAM      + +A GG  +I+ N  TG+L   G      LA  
Sbjct: 332 VIIPSYFE--PFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGD--PGELANA 386

Query: 327 IVK-LATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKS 372
           I+K L           +   +R    F     AER        + ++
Sbjct: 387 ILKALELSRSDLSKFRENCKKRAMS-FSWEKSAERYVKAYTGSIDRA 432

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

 Score = 49.1 bits (115), Expect = 3e-07
 Identities = 44/368 (11%), Positives = 104/368 (28%), Gaps = 23/368 (6%)

Query: 1   MELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA-- 58
           M +A  +   G  V   T     +  +    ++  +        +A+    +   LK   
Sbjct: 20  MRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEHP 79

Query: 59  -DLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDS 117
            D +V    + G  +           +     +++ +   Y      +      G     
Sbjct: 80  ADRVVGFNKMPGLDVYFAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKL 139

Query: 118 HVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNED 177
            +  +      ++  + +     ++  G         + +      RE  R+  G++ + 
Sbjct: 140 MMLTDKQIADFQKHYQTEPERFQILPPGI----YPDRKYSEQIPNSREIYRQKNGIKEQQ 195

Query: 178 LLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRN 237
            L   + S    KG D  + +     E ++   L            +  A+        +
Sbjct: 196 NLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVH 255

Query: 238 YVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA 297
           +   +     +      L    Y  A  +++  +   G              LPVL TA 
Sbjct: 256 FFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG--------------LPVLTTAV 301

Query: 298 GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHM 357
            G    + +   G +          L + + K  T    R+   +            + +
Sbjct: 302 CGYAHYIADANCGTVIAEPFS-QEQLNEVLRKALTQSPLRMAWAENARHYADT-QDLYSL 359

Query: 358 AERIAVVL 365
            E+ A ++
Sbjct: 360 PEKAADII 367

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

 Score = 42.9 bits (100), Expect = 4e-05
 Identities = 32/248 (12%), Positives = 72/248 (29%), Gaps = 30/248 (12%)

Query: 138 DTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRG---KGQDL 194
            T V  +G   + +           L +   E   V+        I SV R    KG   
Sbjct: 219 RTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQ-------NIFSVERLDYSKGLPE 271

Query: 195 FLHSFYESLELIKEKKLEVPSV-HAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 253
              ++   LE   +   ++     A     D+ A      +L N   +   +        
Sbjct: 272 RFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTP 331

Query: 254 TLTVAPYLAAIDVLVQNSQAWG-------ECFGRITIEAMAFQLP-----VLGTAAGGTT 301
              +  +     ++     +         +    +  E +A Q P     ++ +   G  
Sbjct: 332 LYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA 391

Query: 302 EIVVNGTTGLLHPVGKEGITPLAKNIVKLATH-VERRLTMGKRGYERVKEIFQEHHMAER 360
             + +    L+          +A  + +  T  +  R++      + + +    +H  E 
Sbjct: 392 NELTSA---LIVNPYD--RDEVAAALDRALTMSLAERISRHAEMLDVIVK-NDINHWQEC 445

Query: 361 IAVVLKEV 368
               LK++
Sbjct: 446 FISDLKQI 453

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	377
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	100.0
d2iw1a1	370	Lipopolysaccharide core biosynthesis protein RfaG	100.0
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	100.0
d2bfwa1	196	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.97
d1uqta_	456	Trehalose-6-phosphate synthase, OtsA {Escherichia	99.95
d2f9fa1	166	First mannosyl transferase WbaZ {Archaeoglobus ful	99.93
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	99.49
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	99.21
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	99.15
d1v4va_	373	UDP-N-acetylglucosamine 2-epimerase {Thermus therm	99.11
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	99.0
d1f6da_	376	UDP-N-acetylglucosamine 2-epimerase {Escherichia c	98.66
d1o6ca_	377	UDP-N-acetylglucosamine 2-epimerase {Bacillus subt	98.65
d1l5wa_	796	Maltodextrin phosphorylase (MALP) {Escherichia col	98.57
d2gj4a1	824	Glycogen phosphorylase {Rabbit (Oryctolagus cunicu	98.47
d2acva1	461	Triterpene UDP-glucosyl transferase UGT71G1 {Medic	98.39
d1ygpa_	876	Glycogen phosphorylase {Baker's yeast (Saccharomyc	97.93
d2pq6a1	473	(Iso)flavonoid glycosyltransferase {Medicago trunc	97.72
d2c1xa1	450	UDP glucose:flavonoid 3-o-glucosyltransferase {Gra	97.38
d2vcha1	471	Hydroquinone glucosyltransferase {Thale cress (Ara	96.88
d1pswa_	348	ADP-heptose LPS heptosyltransferase II {Escherichi	96.49
d1i3ca_	144	Response regulator for cyanobacterial phytochrome	91.24
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	88.83
d1k68a_	140	Response regulator for cyanobacterial phytochrome	88.78
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	86.45
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	86.41
d1k66a_	149	Response regulator for cyanobacterial phytochrome	85.96
d1w25a1	139	Response regulator PleD, receiver domain {Caulobac	85.0
d1p6qa_	129	CheY protein {Sinorhizobium meliloti, CheY2 [TaxId	84.88
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	84.06
d1jbea_	128	CheY protein {Escherichia coli [TaxId: 562]}	83.99
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	83.78
d1dbwa_	123	Transcriptional regulatory protein FixJ, receiver	83.76
d1a04a2	138	Nitrate/nitrite response regulator (NarL), receive	82.91
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	81.09
d1ny5a1	137	Transcriptional activator sigm54 (NtrC1), N-termin	80.77
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	80.22

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.7e-40  Score=308.48  Aligned_cols=292  Identities=16%  Similarity=0.123  Sum_probs=212.5

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccc-cch-------------------------hhhccccc
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-FKL-------------------------DYVKHLPL  109 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~-~~~-------------------------~~~~~~~~  109 (377)
                      .+|||||+|+..++.....+.....  ...|++.+.|+..... +..                         .....+..
T Consensus       129 ~~pDIvH~h~~~~~l~~~~~~~~~~--~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (477)
T d1rzua_         129 WRPDMVHAHDWQAAMTPVYMRYAET--PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQT  206 (477)
T ss_dssp             CCCSEEEEEHHHHTTHHHHHHHSSS--CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHH
T ss_pred             CCCCEEEecchhHHHHHHHHHHhhC--CCCCEEEEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHHh
Confidence            5899999997544433322222222  2358999999753110 000                         00112235


Q ss_pred             cceeeeeccchhhHhhhhh-----hhhhhccCCCeEEEEcCChhhhHHHhhhhh-----------hhhhhHHHHHHHhCC
Q 017085          110 VAGAMIDSHVTAEYWKNRT-----RERLRIKMPDTYVVHLGNSKELMEVAEDNV-----------AKRVLREHVRESLGV  173 (377)
Q Consensus       110 ~~~~~~~s~~~~~~~~~~~-----~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~-----------~~~~~~~~~r~~~~~  173 (377)
                      +|.++++|...++......     .........++.+|+||+|.+.|.+.....           .....+...+...++
T Consensus       207 ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  286 (477)
T d1rzua_         207 ATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRI  286 (477)
T ss_dssp             CSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTC
T ss_pred             hhhhhhccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhccc
Confidence            7788888876654332210     001112345799999999988765432110           112234566777777


Q ss_pred             CC-CCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEec
Q 017085          174 RN-EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN  252 (377)
Q Consensus       174 ~~-~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g  252 (377)
                      ++ +.++|+++||+.++||++.|++++.++.+         .+.+++++|.|..   ....++++....+  .+++.+.+
T Consensus       287 ~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~---------~~~~l~~~G~G~~---~~~~~~~~~~~~~--~~~v~~~~  352 (477)
T d1rzua_         287 DDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS---------LGGRLVVLGAGDV---ALEGALLAAASRH--HGRVGVAI  352 (477)
T ss_dssp             CCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH---------TTCEEEEEECBCH---HHHHHHHHHHHHT--TTTEEEEE
T ss_pred             ccCCccEEEEEeeeeecCCcHHHHHHHHHHHh---------hCCeEEEEecCCc---hHHHHHHHHHhhc--CCeEEEEc
Confidence            65 45789999999999999999999998765         5789999998843   2344455554444  57899888


Q ss_pred             Cc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCc---------ceeeecCCCCChh
Q 017085          253 KT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGT---------TGLLHPVGKEGIT  321 (377)
Q Consensus       253 ~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~---------~g~~~~~~~~~~~  321 (377)
                      ..  +++..+|++||++|+||.  +|+||++++|||+||+|||+|+.||++|++.++.         +|+++++.|  ++
T Consensus       353 ~~~~~~~~~~~~~aD~~v~PS~--~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d--~~  428 (477)
T d1rzua_         353 GYNEPLSHLMQAGCDAIIIPSR--FEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVT--LD  428 (477)
T ss_dssp             SCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCS--HH
T ss_pred             ccChhHHHHHHHhCccccCCcc--ccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCC--HH
Confidence            76  456678999999999999  8999999999999999999999999999998764         899999998  99


Q ss_pred             HHHHHHHHHhh---CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Q 017085          322 PLAKNIVKLAT---HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK  370 (377)
Q Consensus       322 ~la~~i~~l~~---~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  370 (377)
                      +|+++|.++++   |++.+++|++++.   .++|||+.++++++++|+++++
T Consensus       429 ~la~ai~~~l~~~~~~~~~~~~~~~a~---~~~fsw~~~a~~~~~lY~~ll~  477 (477)
T d1rzua_         429 GLKQAIRRTVRYYHDPKLWTQMQKLGM---KSDVSWEKSAGLYAALYSQLIS  477 (477)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHHHHHH---TCCCBHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhhhCCHHHHHHHHHHHH---HhhCCHHHHHHHHHHHHHHHhC
Confidence            99999998775   8999999988874   4679999999999999999874

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.7e-41  Score=300.25  Aligned_cols=233  Identities=16%  Similarity=0.166  Sum_probs=196.3

Q ss_pred             ccceeeeeccchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccc
Q 017085          109 LVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR  188 (377)
Q Consensus       109 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~  188 (377)
                      ..+.+++.+......+.+    .++.+.+++.++|||++.+.+.+...+    ..+...|+.++++++.++++++||+.+
T Consensus       135 ~~~~~~~~~~~~~~~~~~----~~~~~~~~i~vi~~gv~~~~~~~~~~~----~~~~~~r~~~~~~~~~~~i~~~gr~~~  206 (370)
T d2iw1a1         135 KSTKLMMLTDKQIADFQK----HYQTEPERFQILPPGIYPDRKYSEQIP----NSREIYRQKNGIKEQQNLLLQVGSDFG  206 (370)
T ss_dssp             CCCEEEESCHHHHHHHHH----HHCCCGGGEEECCCCCCGGGSGGGSCT----THHHHHHHHTTCCTTCEEEEEECSCTT
T ss_pred             cCceEEEecHHHHHHHHH----hcCCCcceEEEEEeecccccccccCch----hhhhhhhhccCCCccceEEEEEecccc
Confidence            456677777766655443    667788899999999998765443221    235778999999999999999999999


Q ss_pred             cchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEE
Q 017085          189 GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLV  268 (377)
Q Consensus       189 ~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l  268 (377)
                      +||++.+++|++.+.+..       ++..+.++|++.     ..+.+++++++++..++++|+|+++++.++|+.||+++
T Consensus       207 ~Kg~~~li~a~~~l~~~~-------~~~~~~ii~g~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~v  274 (370)
T d2iw1a1         207 RKGVDRSIEALASLPESL-------RHNTLLFVVGQD-----KPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLL  274 (370)
T ss_dssp             TTTHHHHHHHHHTSCHHH-------HHTEEEEEESSS-----CCHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEE
T ss_pred             ccchhhhccccccccccc-------ccceeeeccccc-----cccccccccccccccccccccccccccccccccccccc
Confidence            999999999999775533       456677676653     33567888899999999999999999999999999999


Q ss_pred             ecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeee-cCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 017085          269 QNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLH-PVGKEGITPLAKNIVKLATHVERRLTMGKRGYER  347 (377)
Q Consensus       269 ~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~-~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~  347 (377)
                      +||.  .|+||++++|||+||+|||+|+.||.+|++.++.+|+++ +++|  +++|+++|.++++|++.+.+|+++|+++
T Consensus       275 ~ps~--~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d--~~~la~~i~~ll~d~~~~~~~~~~ar~~  350 (370)
T d2iw1a1         275 HPAY--QEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFS--QEQLNEVLRKALTQSPLRMAWAENARHY  350 (370)
T ss_dssp             ECCS--CCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCC--HHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             cccc--cccccceeeecccCCeeEEEeCCCChHHHhcCCCceEEEcCCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            9998  899999999999999999999999999999999999766 5667  9999999999999999999999999998


Q ss_pred             HHHhcCHHHHHHHHHHHHH
Q 017085          348 VKEIFQEHHMAERIAVVLK  366 (377)
Q Consensus       348 ~~~~f~~~~~~~~~~~~~~  366 (377)
                      +. .|++..+.+++.++|+
T Consensus       351 ~~-~~~~~~~~~~~~~ii~  368 (370)
T d2iw1a1         351 AD-TQDLYSLPEKAADIIT  368 (370)
T ss_dssp             HH-HSCCSCHHHHHHHHHH
T ss_pred             HH-HhChhHHHHHHHHHHh
Confidence            74 5888777888877775

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=100.00  E-value=6.4e-39  Score=294.66  Aligned_cols=295  Identities=17%  Similarity=0.114  Sum_probs=219.5

Q ss_pred             hcccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeecccccchhh------------------hccccccceeeeec
Q 017085           56 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDY------------------VKHLPLVAGAMIDS  117 (377)
Q Consensus        56 ~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~------------------~~~~~~~~~~~~~s  117 (377)
                      ..||+||+|+...+.....+...    ...|+++++|+.....+....                  ......++.+++.+
T Consensus       119 ~~pDiIh~~~~~~~~~~~~~~~~----~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~  194 (437)
T d2bisa1         119 PLPDVVHFHDWHTVFAGALIKKY----FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVS  194 (437)
T ss_dssp             CCCSEEEEETGGGHHHHHHHHHH----HCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESC
T ss_pred             CCCCEEEECChhhhhHhhhhhcc----ccCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccc
Confidence            46899999987655433222221    135899999987542221110                  01112456666666


Q ss_pred             cchhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEecccc-ccchhHHHH
Q 017085          118 HVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS-RGKGQDLFL  196 (377)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~-~~Kg~~~ll  196 (377)
                      .........    .++....++.+++||+|.+.+.+..........+...++.+++. +.++++++|++. +.||++.++
T Consensus       195 ~~~~~~~~~----~~~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~G~~~~~~Kg~~~ll  269 (437)
T d2bisa1         195 RGYLIDEWG----FFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMD-EGVTFMFIGRFDRGQKGVDVLL  269 (437)
T ss_dssp             HHHHHHTHH----HHGGGTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCC-SCEEEEEESCBCSSSSCHHHHH
T ss_pred             hhhhhhhhh----hhccccCceEEEecccccccccccccchhhHHHHHhhhhhhhcc-CCceEEEeecccccchhHHHHH
Confidence            655433322    44556789999999999988766544333344566788888885 558889999986 479999999


Q ss_pred             HHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCC
Q 017085          197 HSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAW  274 (377)
Q Consensus       197 ~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~  274 (377)
                      +|+..+..+.     +.++++|+++|.+.+   .....++...+.  ..+.+.+.|..  +++..+++.||++++||.  
T Consensus       270 ~a~~~~~~~~-----~~~~~~lvi~G~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~adi~v~~s~--  337 (437)
T d2bisa1         270 KAIEILSSKK-----EFQEMRFIIIGKGDP---ELEGWARSLEEK--HGNVKVITEMLSREFVRELYGSVDFVIIPSY--  337 (437)
T ss_dssp             HHHHHHTTSG-----GGGGEEEEEECCBCH---HHHHHHHHHHHT--CTTEEEECSCCCHHHHHHHHTTCSEEEECCS--
T ss_pred             hhhccccccc-----ccccceeeeeccccc---ccccchhhhccc--cccceeccccCcHHHHHHHHhhhcccccccc--
Confidence            9998764321     237899999999853   223333343333  34566777765  679999999999999999  


Q ss_pred             CCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcC
Q 017085          275 GECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQ  353 (377)
Q Consensus       275 ~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~f~  353 (377)
                      .|++|++++|||+||+|||+|+.||..|++.+ ++|+++++.|  +++|+++|.++++ +++.+.++++++++.+ ++||
T Consensus       338 ~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~d--~~~la~~i~~ll~~~~~~~~~~~~~~~~~~-~~~s  413 (437)
T d2bisa1         338 FEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGD--PGELANAILKALELSRSDLSKFRENCKKRA-MSFS  413 (437)
T ss_dssp             CCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEECTTC--HHHHHHHHHHHHTTTTSCTHHHHHHHHHHH-HHSC
T ss_pred             ccccchHHHHHHHCCCCEEEeCCCCcHHhEEC-CcEEEECCCC--HHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HhCC
Confidence            99999999999999999999999999999875 5899999988  9999999999987 7888999999999987 4699


Q ss_pred             HHHHHHHHHHHHHHHHhccccc
Q 017085          354 EHHMAERIAVVLKEVLKKSKSH  375 (377)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~~~~~  375 (377)
                      |++++++++++|++++++..++
T Consensus       414 ~~~~a~~~~~iY~~~i~r~~~~  435 (437)
T d2bisa1         414 WEKSAERYVKAYTGSIDRAFDF  435 (437)
T ss_dssp             HHHHHHHHHHHHHTCSCCBCTT
T ss_pred             HHHHHHHHHHHHHHHHHhHhhh
Confidence            9999999999999998876553

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=99.97  E-value=3.4e-30  Score=209.50  Aligned_cols=192  Identities=20%  Similarity=0.249  Sum_probs=155.4

Q ss_pred             CChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEecccc-ccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEec
Q 017085          145 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS-RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS  223 (377)
Q Consensus       145 gi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~-~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~  223 (377)
                      |||.+.|.+..........+..++++++++ +..+|+|+||+. ++||++.++++++.+.+..     ..++++|+++|.
T Consensus         1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~-----~~~~~~l~i~G~   74 (196)
T d2bfwa1           1 GIDCSFWNESYLTGSRDERKKSLLSKFGMD-EGVTFMFIGRFDRGQKGVDVLLKAIEILSSKK-----EFQEMRFIIIGK   74 (196)
T ss_dssp             CCCTTTSSGGGSCSCHHHHHHHHHHHTTCC-SCEEEEEESCBCSSSSCHHHHHHHHHHHTTSG-----GGGGEEEEEECC
T ss_pred             CcChhhcCCCCCCchhHHHHHHHHHHhCCC-CCCEEEEEcCCCccccCHHHHHHHHHhhhccc-----CCCCeEEEEEee
Confidence            678888866544444455678889999995 667788999996 6899999999999764322     237899999998


Q ss_pred             CCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcc
Q 017085          224 DMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTT  301 (377)
Q Consensus       224 ~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~  301 (377)
                      |.+   .+...++...+.+  ...+.+.|..  +++..+|+.||++++||.  .|++|++++|||+||+|||+++.++..
T Consensus        75 g~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~di~v~ps~--~e~~~~~~~Eam~~G~pvI~~~~~~~~  147 (196)
T d2bfwa1          75 GDP---ELEGWARSLEEKH--GNVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLR  147 (196)
T ss_dssp             BCH---HHHHHHHHHHHHC--TTEEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHHTTCEEEEESCHHHH
T ss_pred             ccc---chhhhhhhhhhcc--ceeEEeeeccccccchhccccccccccccc--cccccccchhhhhcCceeeecCCCccc
Confidence            742   2333344444443  3456666665  679999999999999999  999999999999999999999999999


Q ss_pred             cceecCcceeeecCCCCChhHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcC
Q 017085          302 EIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQ  353 (377)
Q Consensus       302 e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~f~  353 (377)
                      +++.+ .+|++++++|  +++++++|.++++ +++.+.+++++|++++.+ ||
T Consensus       148 e~i~~-~~g~~~~~~~--~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~-fs  196 (196)
T d2bfwa1         148 DIITN-ETGILVKAGD--PGELANAILKALELSRSDLSKFRENCKKRAMS-FS  196 (196)
T ss_dssp             HHCCT-TTCEEECTTC--HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-TC
T ss_pred             eeecC-CceeeECCCC--HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh-CC
Confidence            98865 5999999988  9999999999888 899999999999998754 75

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.8e-26  Score=210.28  Aligned_cols=294  Identities=12%  Similarity=0.032  Sum_probs=210.0

Q ss_pred             cccEEEEcCchhhhHHHHHhhcCCCccccceeEEeeeeccccc-------chhhhccccccceeeeeccchhhHhhhhhh
Q 017085           57 KADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYF-------KLDYVKHLPLVAGAMIDSHVTAEYWKNRTR  129 (377)
Q Consensus        57 ~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~-------~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  129 (377)
                      .-|+|++|+...... ...++...+.  .+++++.|..++...       .......+-.+|.+...+...+..+.....
T Consensus       122 ~~d~iwvhDyhl~ll-p~~lR~~~~~--~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~  198 (456)
T d1uqta_         122 DDDIIWIHDYHLLPF-AHELRKRGVN--NRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLS  198 (456)
T ss_dssp             TTCEEEEESGGGTTH-HHHHHHTTCC--SCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHH
T ss_pred             CCCeEEEeccchhhh-HHHHHHhCCC--CcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHHH
Confidence            349999998654433 3333333443  478888887654221       112222334667777776666655554333


Q ss_pred             hhhhc------------cCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHH
Q 017085          130 ERLRI------------KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLH  197 (377)
Q Consensus       130 ~~~~~------------~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~  197 (377)
                      ..++.            ...++.++|+|+|++.+....... ......+++..+   .+.++|+++||+++.||++.+++
T Consensus       199 ~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~-~~~~~~~l~~~~---~~~~~il~V~Rld~~KGi~~~l~  274 (456)
T d1uqta_         199 NLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGP-LPPKLAQLKAEL---KNVQNIFSVERLDYSKGLPERFL  274 (456)
T ss_dssp             HHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSC-CCHHHHHHHHHT---TTCEEEEEECCBCGGGCHHHHHH
T ss_pred             HHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccH-HHHHHHHHHHhc---CCCeEEEEeCCCchhhchHHHHH
Confidence            22221            123678999999999886643322 122234455554   47789999999999999999999


Q ss_pred             HHHHHHHHHhhhcccCCCeEEEEEecCCCcccHH----HHHHHHHHH-------hcCCCCcEEEecCc--CCHHHHHHhc
Q 017085          198 SFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKF----ESELRNYVM-------QKKIQDRVHFVNKT--LTVAPYLAAI  264 (377)
Q Consensus       198 a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~----~~~l~~~~~-------~~~~~~~v~~~g~~--~~~~~~~~~a  264 (377)
                      |+.++++...+.   ...+.++.+|.+...+.+.    ..++.+++.       ..+..+.+.+.+..  +++..+|+.|
T Consensus       275 A~~~~l~~~p~~---~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~A  351 (456)
T d1uqta_         275 AYEALLEKYPQH---HGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS  351 (456)
T ss_dssp             HHHHHHHHCGGG---TTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHC
T ss_pred             HHHHHHHhCccc---cccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhh
Confidence            999987744331   1357788887765433222    223333332       23566778888865  7899999999


Q ss_pred             CEEEecCCCCCCccchHHHHHHHcCCc-----EEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhh-CHHHHH
Q 017085          265 DVLVQNSQAWGECFGRITIEAMAFQLP-----VLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERRL  338 (377)
Q Consensus       265 dv~l~ps~~~~e~~~~~~~Ea~a~g~P-----vI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~-~~~~~~  338 (377)
                      |++++||.  .||||++++|||+||+|     +|+|+.+|..+.+.   .|+++++.|  ++++|++|.++++ +++++.
T Consensus       352 dv~v~~s~--~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~---~g~lVnP~d--~~~~A~ai~~aL~~~~~er~  424 (456)
T d1uqta_         352 DVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYD--RDEVAAALDRALTMSLAERI  424 (456)
T ss_dssp             SEEEECCS--SBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTC--HHHHHHHHHHHHTCCHHHHH
T ss_pred             ceeecCCc--cCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHhC---CeEEECcCC--HHHHHHHHHHHHcCCHHHHH
Confidence            99999999  99999999999999999     99999999999984   489999998  9999999999998 677889


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 017085          339 TMGKRGYERVKEIFQEHHMAERIAVVLKEV  368 (377)
Q Consensus       339 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~  368 (377)
                      ++.+++++.+. +||+..+++.+++-++++
T Consensus       425 ~~~~~~~~~v~-~~~~~~W~~~fl~~l~~~  453 (456)
T d1uqta_         425 SRHAEMLDVIV-KNDINHWQECFISDLKQI  453 (456)
T ss_dssp             HHHHHHHHHHH-HTCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHH-HCCHHHHHHHHHHHHHhh
Confidence            99999999986 599999999998888764

>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: First mannosyl transferase WbaZ
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.93  E-value=2.9e-26  Score=180.79  Aligned_cols=141  Identities=23%  Similarity=0.330  Sum_probs=120.5

Q ss_pred             CCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc-
Q 017085          176 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT-  254 (377)
Q Consensus       176 ~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~-  254 (377)
                      +.+ ++|+||+.++||++.+++|++++           ++.+++|+|.+....  ..+.+.+.+.+.. .++|+|+|++ 
T Consensus        12 ~~~-~l~iGrl~~~K~~~~~i~a~~~l-----------~~~~l~ivg~~~~~~--~~~~~~~~~~~~~-~~~v~~~g~~~   76 (166)
T d2f9fa1          12 GDF-WLSVNRIYPEKRIELQLEVFKKL-----------QDEKLYIVGWFSKGD--HAERYARKIMKIA-PDNVKFLGSVS   76 (166)
T ss_dssp             CSC-EEEECCSSGGGTHHHHHHHHHHC-----------TTSCEEEEBCCCTTS--THHHHHHHHHHHS-CTTEEEEESCC
T ss_pred             CCE-EEEEecCccccCHHHHHHHHHHh-----------cCCeEEEEEeccccc--chhhhhhhhcccc-cCcEEEeeccc
Confidence            444 67999999999999999999855           678999999875432  3455555555543 4689999997 


Q ss_pred             -CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhC
Q 017085          255 -LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH  333 (377)
Q Consensus       255 -~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~  333 (377)
                       +++.++|+.||++++||.  .|++|++++|||++|+|||+|+.++..|++.++.+|++++. |  +++++++|.+++++
T Consensus        77 ~~~~~~~~~~ad~~i~ps~--~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~-d--~~~~~~~i~~l~~~  151 (166)
T d2f9fa1          77 EEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-D--VNEIIDAMKKVSKN  151 (166)
T ss_dssp             HHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECS-C--HHHHHHHHHHHHHC
T ss_pred             ccccccccccccccccccc--cccccccccccccccccceeecCCcceeeecCCcccccCCC-C--HHHHHHHHHHHHhC
Confidence             679999999999999999  99999999999999999999999999999999999998764 5  99999999999998


Q ss_pred             HHH
Q 017085          334 VER  336 (377)
Q Consensus       334 ~~~  336 (377)
                      ++.
T Consensus       152 ~~~  154 (166)
T d2f9fa1         152 PDK  154 (166)
T ss_dssp             TTT
T ss_pred             HHH
Confidence            763

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=99.49  E-value=3.4e-12  Score=111.68  Aligned_cols=111  Identities=17%  Similarity=0.066  Sum_probs=77.6

Q ss_pred             CCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC---C----cccceecCcceeeecCCC
Q 017085          245 QDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG---G----TTEIVVNGTTGLLHPVGK  317 (377)
Q Consensus       245 ~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~---~----~~e~~~~~~~g~~~~~~~  317 (377)
                      ..++...++.+++.++|+.||+++.      -+.+.++.|++++|+|+|+...+   +    .++.+.+.+.|+.++..+
T Consensus       230 ~~~~~v~~f~~~~~~lm~~adl~It------~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~  303 (351)
T d1f0ka_         230 QPQHKVTEFIDDMAAAYAWADVVVC------RSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQ  303 (351)
T ss_dssp             CTTSEEESCCSCHHHHHHHCSEEEE------CCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGG
T ss_pred             cccceeeeehhhHHHHHHhCchhhc------cccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEechhh
Confidence            4578889999999999999999984      33468999999999999986432   1    234555566888877544


Q ss_pred             CChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 017085          318 EGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVV  364 (377)
Q Consensus       318 ~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~  364 (377)
                      .+.+.+.++|..+  +++.+.+|++++++.. ..-..+++++.++++
T Consensus       304 ~~~e~l~~~l~~l--~~~~~~~~~~~~~~~~-~~~~a~~i~~~i~~l  347 (351)
T d1f0ka_         304 LSVDAVANTLAGW--SRETLLTMAERARAAS-IPDATERVANEVSRV  347 (351)
T ss_dssp             CCHHHHHHHHHTC--CHHHHHHHHHHHHHTC-CTTHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhh--CHHHHHHHHHHHHccC-CccHHHHHHHHHHHH
Confidence            3467777777664  6777888988887632 222344444444443

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.21  E-value=6.4e-10  Score=98.60  Aligned_cols=114  Identities=12%  Similarity=0.088  Sum_probs=81.1

Q ss_pred             CCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC----cccceecCcceeeecCCCC
Q 017085          243 KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKE  318 (377)
Q Consensus       243 ~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~----~~e~~~~~~~g~~~~~~~~  318 (377)
                      .+++++.+.++. ...+++..+|+++      ..|..+++.||+++|+|+|+....+    ..+.+++.+.|...+..+.
T Consensus       283 ~~~~~v~~~~~~-p~~~ll~~~~~~I------~hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~  355 (401)
T d1rrva_         283 DDRDDCFAIDEV-NFQALFRRVAAVI------HHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTP  355 (401)
T ss_dssp             CCCTTEEEESSC-CHHHHGGGSSEEE------ECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCC
T ss_pred             cCCCCEEEEecc-CcHHHhhhccEEE------ecCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEcCcCCC
Confidence            456899999997 4678899999999      4556789999999999999976554    4556666678998887665


Q ss_pred             ChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Q 017085          319 GITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK  370 (377)
Q Consensus       319 ~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  370 (377)
                      +++.|+++|.++++ ++.+    +++++ +.+.... .-+.+..+++++.+.
T Consensus       356 ~~~~L~~ai~~vl~-~~~r----~~a~~-~~~~~~~-~g~~~aa~~ie~~~~  400 (401)
T d1rrva_         356 TFESLSAALTTVLA-PETR----ARAEA-VAGMVLT-DGAAAAADLVLAAVG  400 (401)
T ss_dssp             CHHHHHHHHHHHTS-HHHH----HHHHH-HTTTCCC-CHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhC-HHHH----HHHHH-HHHHHhh-cCHHHHHHHHHHHhC
Confidence            68999999999994 5433    33333 2233432 244555666655543

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.15  E-value=1.2e-09  Score=96.43  Aligned_cols=114  Identities=11%  Similarity=0.062  Sum_probs=79.5

Q ss_pred             CCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC--------cccceecCcceeeecC
Q 017085          244 IQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG--------TTEIVVNGTTGLLHPV  315 (377)
Q Consensus       244 ~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~--------~~e~~~~~~~g~~~~~  315 (377)
                      .++++.+.++. +...++..+|+++..+      ..+++.|||++|+|+|+....+        ..+.+.+.+.|+.++.
T Consensus       268 ~~~~v~i~~~~-p~~~ll~~a~~~v~hg------G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~  340 (391)
T d1pn3a_         268 DGADCFVVGEV-NLQELFGRVAAAIHHD------SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDG  340 (391)
T ss_dssp             CCTTCCEESSC-CHHHHHTTSSCEEEES------CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECC
T ss_pred             CCCCEEEeccc-CHHHHHhhccEEEecC------chHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCc
Confidence            46789999998 5678899999999654      3578999999999999986443        3555666678998887


Q ss_pred             CCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Q 017085          316 GKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKK  371 (377)
Q Consensus       316 ~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  371 (377)
                      .+.+.++|+++|.+++++ +.    .+++++. .+.+..+ -+.+-.+.+++.+.+
T Consensus       341 ~~~~~~~l~~~i~~~l~~-~~----r~~a~~~-a~~~~~~-g~~~aa~~i~~~l~~  389 (391)
T d1pn3a_         341 PVPTIDSLSAALDTALAP-EI----RARATTV-ADTIRAD-GTTVAAQLLFDAVSL  389 (391)
T ss_dssp             SSCCHHHHHHHHHHHTST-TH----HHHHHHH-GGGSCSC-HHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhCH-HH----HHHHHHH-HHHHHhc-CHHHHHHHHHHHHHh
Confidence            665689999999999964 32    3344432 2334333 334444555555544

>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Thermus thermophilus [TaxId: 274]

Probab=99.11  E-value=3.8e-09  Score=92.43  Aligned_cols=315  Identities=14%  Similarity=0.058  Sum_probs=181.2

Q ss_pred             HhhHHHh-cCceEEEEEecCCCcchhHhhhhhhhhcccCce------EEE------------ccchhHHHhhhcccEEEE
Q 017085            3 LAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQ------VIS------------AKGQETINTALKADLIVL   63 (377)
Q Consensus         3 la~~L~~-~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~------------~~~~~~~~~~~~~Div~~   63 (377)
                      +.++|++ .++++.++.++...+..  .    ..+...|+.      +..            ......++.+.+||+|++
T Consensus        21 li~~l~~~~~~~~~li~tG~H~~~~--~----~~~~~~~i~~d~~l~~~~~~~s~~~~~~~~~~~~~~~l~~~kPD~vlv   94 (373)
T d1v4va_          21 VYLALRGIPGLKPLVLLTGQHREQL--R----QALSLFGIQEDRNLDVMQERQALPDLAARILPQAARALKEMGADYVLV   94 (373)
T ss_dssp             HHHHHHTSTTEEEEEEECSSCHHHH--H----HHHHTTTCCCSEECCCCSSCCCHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred             HHHHHHhCCCCCEEEEEccCChhhh--h----CcchhcCCCccccCCCCCCCCCHHHHHHHHHHHHhhhhhhcCcccccc
Confidence            5677876 58999998877652211  1    111111221      100            013345667899999999


Q ss_pred             cCchhhhHHHHH--hhcCCCccccceeEEeee-ecccc-----cchhhhccc-cccceeeeeccchhhHhhhhhhhhhhc
Q 017085           64 NTAVAGKWLDAV--LKEDVPRVLPNVLWWIHE-MRGHY-----FKLDYVKHL-PLVAGAMIDSHVTAEYWKNRTRERLRI  134 (377)
Q Consensus        64 ~~~~~~~~~~~~--~~~~~~~~~~~~v~~~h~-~~~~~-----~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~  134 (377)
                      ++.....+..+.  ....+     |+ .++|+ ..+.-     .....+... +.++..++.+....+.+.     ..|.
T Consensus        95 ~GDr~e~la~a~aa~~~~i-----pi-~HiegG~rsg~~~~~~~de~~R~~iskls~~hf~~t~~~~~~L~-----~~Ge  163 (373)
T d1v4va_          95 HGDTLTTFAVAWAAFLEGI-----PV-GHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFAPTPLAKANLL-----KEGK  163 (373)
T ss_dssp             ESSCHHHHHHHHHHHHTTC-----CE-EEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESSHHHHHHHH-----TTTC
T ss_pred             cccCccchhHHHHHHHhhh-----hh-eeecccccccccccCcchhhhhhhhccccceeeecchhhhhhhh-----hhcc
Confidence            986533333222  22233     32 23443 21111     122233333 355667777777767666     5677


Q ss_pred             cCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHhCCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCC
Q 017085          135 KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVP  214 (377)
Q Consensus       135 ~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~  214 (377)
                      ++.++.++.++.- +.+...         ....+.....+.++++++..-|....+....+.+++..+.+       ...
T Consensus       164 ~~~~I~~vG~p~~-D~i~~~---------~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~-------~~~  226 (373)
T d1v4va_         164 REEGILVTGQTGV-DAVLLA---------AKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAE-------AFP  226 (373)
T ss_dssp             CGGGEEECCCHHH-HHHHHH---------HHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHH-------HCT
T ss_pred             cccceeecccchh-hHHHhh---------hhhcccccccccccceeEEeccccccchHHHHHHHHHHHhh-------hcc
Confidence            8888888876542 222111         01112223455667777777766656666777777766544       235


Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcE
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPV  292 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~Pv  292 (377)
                      ++.+++.....+   .....+.+.   .....++.++.+.  .+...+++.|++++-.|       |..+.||.++|+|+
T Consensus       227 ~~~~i~p~~~~~---~~~~~~~~~---~~~~~n~~~~~~l~~~~~l~ll~~s~~vignS-------ssgi~Ea~~lg~P~  293 (373)
T d1v4va_         227 HLTFVYPVHLNP---VVREAVFPV---LKGVRNFVLLDPLEYGSMAALMRASLLLVTDS-------GGLQEEGAALGVPV  293 (373)
T ss_dssp             TSEEEEECCSCH---HHHHHHHHH---HTTCTTEEEECCCCHHHHHHHHHTEEEEEESC-------HHHHHHHHHTTCCE
T ss_pred             cceeeeeecccc---cchhhhhhh---hcccccceeeccchHHHHHHHhhhceeEeccc-------chhhhcchhhcCcE
Confidence            666665544321   222333332   3334588888876  67888899999988555       55688999999999


Q ss_pred             EEe-CCCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Q 017085          293 LGT-AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKK  371 (377)
Q Consensus       293 I~s-~~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  371 (377)
                      |.- +.|.-++-+..+.+ .++.. |  .+++.+++..+++++..+..+...     ..-|---+.++++.+.+.+-++.
T Consensus       294 Inir~~~eRqeg~~~g~n-vlv~~-d--~~~I~~~i~~~l~~~~~~~~~~~~-----~npYGdG~as~rI~~~L~~~~~~  364 (373)
T d1v4va_         294 VVLRNVTERPEGLKAGIL-KLAGT-D--PEGVYRVVKGLLENPEELSRMRKA-----KNPYGDGKAGLMVARGVAWRLGL  364 (373)
T ss_dssp             EECSSSCSCHHHHHHTSE-EECCS-C--HHHHHHHHHHHHTCHHHHHHHHHS-----CCSSCCSCHHHHHHHHHHHHTTS
T ss_pred             EEeCCCccCHHHHhcCee-EEcCC-C--HHHHHHHHHHHHcCHHHHhhcccC-----CCCCCCCHHHHHHHHHHHHHhCC
Confidence            988 45766666655533 44433 4  899999999999999876655331     11133345556666666655544


Q ss_pred             cc
Q 017085          372 SK  373 (377)
Q Consensus       372 ~~  373 (377)
                      .+
T Consensus       365 ~~  366 (373)
T d1v4va_         365 GP  366 (373)
T ss_dssp             SC
T ss_pred             CC
Confidence            33

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.00  E-value=1.1e-08  Score=90.24  Aligned_cols=84  Identities=10%  Similarity=-0.028  Sum_probs=66.9

Q ss_pred             CCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC----cccceecCcceeeecCCCC
Q 017085          243 KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKE  318 (377)
Q Consensus       243 ~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~----~~e~~~~~~~g~~~~~~~~  318 (377)
                      ..++++++.++.+ ..++|..+|++|      ..|..+++.||+++|+|+|+....+    ....+.+.+.|+..+..+.
T Consensus       282 ~~~~nv~~~~~~p-~~~~l~~~~~~V------~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~  354 (401)
T d1iira_         282 DDGADCFAIGEVN-HQVLFGRVAAVI------HHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIP  354 (401)
T ss_dssp             SCGGGEEECSSCC-HHHHGGGSSEEE------ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred             cCCCCEEEEeccC-HHHHHhhcCEEE------ecCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcCcCCC
Confidence            3467899999974 678899999999      4566889999999999999975433    4555666668988877655


Q ss_pred             ChhHHHHHHHHHhhC
Q 017085          319 GITPLAKNIVKLATH  333 (377)
Q Consensus       319 ~~~~la~~i~~l~~~  333 (377)
                      ++++++++|.+++++
T Consensus       355 ~~~~l~~ai~~~l~~  369 (401)
T d1iira_         355 TFDSLSAALATALTP  369 (401)
T ss_dssp             CHHHHHHHHHHHTSH
T ss_pred             CHHHHHHHHHHHhCH
Confidence            599999999999953

>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.66  E-value=3.9e-06  Score=72.81  Aligned_cols=278  Identities=12%  Similarity=0.119  Sum_probs=149.5

Q ss_pred             hhHHHhhhcccEEEEcCchhhhHHHHHhh--cCCCccccceeEEeeee-cc-cc----cchhhhccc-cccceeeeeccc
Q 017085           49 QETINTALKADLIVLNTAVAGKWLDAVLK--EDVPRVLPNVLWWIHEM-RG-HY----FKLDYVKHL-PLVAGAMIDSHV  119 (377)
Q Consensus        49 ~~~~~~~~~~Div~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~h~~-~~-~~----~~~~~~~~~-~~~~~~~~~s~~  119 (377)
                      +..++.+.+||+|++++-....+..+...  ..+     | +.++|+- .+ ..    .....+... +.++..++.++.
T Consensus        78 ~~~~~~~~kPD~v~v~GDr~e~la~a~aa~~~~i-----p-i~HiegG~~s~~~~~~~pde~~R~~iskls~~hf~~~~~  151 (376)
T d1f6da_          78 LKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRI-----P-VGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTET  151 (376)
T ss_dssp             HHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTC-----C-EEEESCCCCCSCTTSSTTHHHHHHHHHHTCSEEEESSHH
T ss_pred             hHHHHHhccCcceeeeccccchhhHHHHHHhhCc-----e-EEEEecccccccccccCchhhhhhhhccceeEEEeccHH
Confidence            34455779999999998654333333222  233     2 3345542 11 11    123344444 455666677776


Q ss_pred             hhhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHh-hhhh-hhhhhHHHHHHHhCCCCC-CeEEEEeccc-cccchhHHH
Q 017085          120 TAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVA-EDNV-AKRVLREHVRESLGVRNE-DLLFAIINSV-SRGKGQDLF  195 (377)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~-~~~~-~~~~~~~~~r~~~~~~~~-~~~i~~~G~~-~~~Kg~~~l  195 (377)
                      ..+.+.     +.|.++.++.++.++.- +.+... .... .....+....+...++.+ +++++..=|. ...+....+
T Consensus       152 ~~~~L~-----~~G~~~~~I~~vG~~~~-D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~~~~~i  225 (376)
T d1f6da_         152 SRQNLL-----RENVADSRIFITGNTVI-DALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEI  225 (376)
T ss_dssp             HHHHHH-----HTTCCGGGEEECCCHHH-HHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCHHHHHH
T ss_pred             HHhHHH-----hcCCCccccceecCchH-HHHHHHHhhhhccchhhhhhhccccccCCCCceEEEecccchhhhhhHHHH
Confidence            666665     66888888999887542 222111 1100 001111222222233333 3444333332 234455556


Q ss_pred             HHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCC
Q 017085          196 LHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQA  273 (377)
Q Consensus       196 l~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~  273 (377)
                      +.++..+.+       ...++.+++.....+   .......+.   +....++.+....  .+...+++.|++++--|  
T Consensus       226 ~~~l~~~~~-------~~~~~~ii~p~~~~~---~~~~~~~~~---~~~~~ni~~~~~l~~~~fl~ll~~a~~vignS--  290 (376)
T d1f6da_         226 CHALADIAT-------THQDIQIVYPVHLNP---NVREPVNRI---LGHVKNVILIDPQEYLPFVWLMNHAWLILTDS--  290 (376)
T ss_dssp             HHHHHHHHH-------HCTTEEEEEECCBCH---HHHHHHHHH---HTTCTTEEEECCCCHHHHHHHHHHCSEEEESS--
T ss_pred             HHHHhhhhh-------hcceeEEecccccch---hhhhhHhhh---hcccccceeeccccHHHHHHHHhhceEEEecC--
Confidence            666655433       225666665543211   122222222   3344689998875  66788999999998665  


Q ss_pred             CCCccchHHHHHHHcCCcEEEeC-CCCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhc
Q 017085          274 WGECFGRITIEAMAFQLPVLGTA-AGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIF  352 (377)
Q Consensus       274 ~~e~~~~~~~Ea~a~g~PvI~s~-~~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~f  352 (377)
                           |..+.||-.+|+|+|.-. .+.-++-+..+ +-.++.. |  .+++.+++.++++++.....+..     ...-|
T Consensus       291 -----ssgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~v~~-~--~~~I~~ai~~~l~~~~~~~~~~~-----~~npY  356 (376)
T d1f6da_         291 -----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-D--KQRIVEEVTRLLKDENEYQAMSR-----AHNPY  356 (376)
T ss_dssp             -----SGGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEECCS-S--HHHHHHHHHHHHHCHHHHHHHHH-----SCCTT
T ss_pred             -----cchHhhHHHhCCCEEEcCCCccCccceecC-eeEECCC-C--HHHHHHHHHHHHhChHhhhhhcc-----CCCCC
Confidence                 345779999999999763 33455555444 4345443 4  89999999999988765433221     11113


Q ss_pred             CHHHHHHHHHHHHHH
Q 017085          353 QEHHMAERIAVVLKE  367 (377)
Q Consensus       353 ~~~~~~~~~~~~~~~  367 (377)
                      --.+.++++.++++.
T Consensus       357 GdG~as~rI~~iLk~  371 (376)
T d1f6da_         357 GDGQACSRILEALKN  371 (376)
T ss_dssp             CCSCHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHh
Confidence            333456666665543

>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Bacillus subtilis [TaxId: 1423]

Probab=98.65  E-value=6.1e-07  Score=78.20  Aligned_cols=248  Identities=13%  Similarity=0.098  Sum_probs=131.5

Q ss_pred             hHHHhhhcccEEEEcCchhhhHHHHHh--hcCCCccccceeEEeeee-ccc-c----cchhhhccc-cccceeeeeccch
Q 017085           50 ETINTALKADLIVLNTAVAGKWLDAVL--KEDVPRVLPNVLWWIHEM-RGH-Y----FKLDYVKHL-PLVAGAMIDSHVT  120 (377)
Q Consensus        50 ~~~~~~~~~Div~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~h~~-~~~-~----~~~~~~~~~-~~~~~~~~~s~~~  120 (377)
                      ..++.+.+||+|++++.....+..+..  ...+     |+ .++|+- .+. .    .....+... ..++..++.++..
T Consensus        81 ~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~I-----pi-~HiegG~~s~~~~~~~~de~~R~~iskls~~hf~~t~~~  154 (377)
T d1o6ca_          81 DELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQI-----AV-GHVEAGLRTGNKYSPFPEELNRQMTGAIADLHFAPTGQA  154 (377)
T ss_dssp             HHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTC-----EE-EEESCCCCCSCTTTTTTHHHHHHHHHHHCSEEEESSHHH
T ss_pred             hhhhhhcccceeEeeecccccchhhhhhhhccc-----eE-EEEecccccccccccCchhhhccccccceeEEeecchhh
Confidence            455677999999999865443332222  2333     33 334432 111 1    122334444 4666777777777


Q ss_pred             hhHhhhhhhhhhhccCCCeEEEEcCChhhhHHHhhhhhhhhhhHHHHHHHh-CCCCCCeEEEEecccccc-chhHHHHHH
Q 017085          121 AEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESL-GVRNEDLLFAIINSVSRG-KGQDLFLHS  198 (377)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~r~~~-~~~~~~~~i~~~G~~~~~-Kg~~~ll~a  198 (377)
                      .+.+.     +.|.++.++.++.++.-..........        .....+ .+..+.++++..-|.... +.....+..
T Consensus       155 ~~~L~-----~~G~~~~~I~~vG~~~~D~i~~~~~~~--------~~~~~~~~~~~~~~ilvt~Hr~~~~~~~~~~~~~~  221 (377)
T d1o6ca_         155 KDNLL-----KENKKADSIFVTGNTAIDALNTTVRDG--------YSHPVLDQVGEDKMILLTAHRRENLGEPMENMFKA  221 (377)
T ss_dssp             HHHHH-----HTTCCGGGEEECCCHHHHHHHHHCCSS--------CCCSTTTTTTTSEEEEECC----------HHHHHH
T ss_pred             hhhhh-----hhccccceEeeccchhHHHHHHHHHHH--------HhhhhhhhccCCceEEEEeccccccccchHHHHHH
Confidence            77766     567788889998876432221111000        000111 112344555544443222 222333333


Q ss_pred             HHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCC
Q 017085          199 FYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGE  276 (377)
Q Consensus       199 ~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e  276 (377)
                      +..+.   .    ...++.+++......   .....+   .+.+...+++.+..+.  .+...+++.|++++--|     
T Consensus       222 ~~~~~---~----~~~~~~~i~~~~~~~---~~~~~~---~~~~~~~~ni~~~~~l~~~~fl~llk~s~~vIgnS-----  283 (377)
T d1o6ca_         222 IRRIV---G----EFEDVQVVYPVHLNP---VVREAA---HKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTDS-----  283 (377)
T ss_dssp             HHHHH---H----HCTTEEEEEC----C---HHHHHH---HHC--CCSSEEECCCCCHHHHHHHHHHCSEEEEC------
T ss_pred             HHhhc---c----ccccccccccccccc---ccchhh---hhccccccceEeccccchHHHHHHHhhhheeeccc-----
Confidence            33332   2    225566554433211   112222   2234445789999986  67889999999998555     


Q ss_pred             ccchHHHHHHHcCCcEEEeCC-CCcccceecCcceeeecCCCCChhHHHHHHHHHhhCHHHHHHH
Q 017085          277 CFGRITIEAMAFQLPVLGTAA-GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTM  340 (377)
Q Consensus       277 ~~~~~~~Ea~a~g~PvI~s~~-~~~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~~~~~~~  340 (377)
                        |..+.||-.+|+|+|.-.. +.-++-+..+ +-.++.. |  .+++.+++.++++++..+..+
T Consensus       284 --ss~i~Ea~~lg~P~Inir~~tERqe~~~~g-~nilv~~-~--~~~I~~~i~~~l~~~~~~~~~  342 (377)
T d1o6ca_         284 --GGVQEEAPSLGKPVLVLRDTTERPEGVEAG-TLKLAGT-D--EENIYQLAKQLLTDPDEYKKM  342 (377)
T ss_dssp             ---CHHHHGGGGTCCEEEECSCCC---CTTTT-SSEEECS-C--HHHHHHHHHHHHHCHHHHHHH
T ss_pred             --chhHHhhhhhhceEEEeCCCCcCcchhhcC-eeEECCC-C--HHHHHHHHHHHHhChHHHhhh
Confidence              3358899999999998743 4455555444 4455554 4  899999999999998766554

>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Maltodextrin phosphorylase (MALP)
species: Escherichia coli [TaxId: 562]

Probab=98.57  E-value=1e-06  Score=82.28  Aligned_cols=143  Identities=15%  Similarity=0.088  Sum_probs=107.0

Q ss_pred             CCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhc-ccCCCeEEEEEecCCCcccHHHHHHHHHHHhcC-------
Q 017085          172 GVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKK-LEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK-------  243 (377)
Q Consensus       172 ~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~-~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~-------  243 (377)
                      .++++.++++++-|+...|+.++++.-...+...|++.. ....++++++.|...|.+. ..+++.+.+.+..       
T Consensus       521 ~ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~-~gK~iIk~I~~va~~in~dp  599 (796)
T d1l5wa_         521 EINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY-LAKNIIFAINKVADVINNDP  599 (796)
T ss_dssp             CCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCH-HHHHHHHHHHHHHHHHHTCT
T ss_pred             ccChhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchH-HHHHHHHHHHHHHHHhcCCh
Confidence            466888999999999999999997766666666666531 0112589999999877663 3444444333211       


Q ss_pred             -C--CCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceec--CcceeeecC
Q 017085          244 -I--QDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN--GTTGLLHPV  315 (377)
Q Consensus       244 -~--~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~--~~~g~~~~~  315 (377)
                       +  ..+|.|+..-  +-...++.+|||.+..+....|.+|++-+-||.-|.+.+++--|...|+..+  ++|||++..
T Consensus       600 ~~~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f~fG~  678 (796)
T d1l5wa_         600 LVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGH  678 (796)
T ss_dssp             TTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSC
T ss_pred             hhccceeEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHhcCccceEEecC
Confidence             1  1268898864  3345677999999988887799999999999999999999998998888764  779998854

>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Glycogen phosphorylase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.47  E-value=3.1e-06  Score=79.03  Aligned_cols=144  Identities=17%  Similarity=0.112  Sum_probs=104.5

Q ss_pred             CCCCCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhc-ccCCCeEEEEEecCCCcccHHHHHHHHHHHhc----C---
Q 017085          172 GVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKK-LEVPSVHAVIIGSDMNAQTKFESELRNYVMQK----K---  243 (377)
Q Consensus       172 ~~~~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~-~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~----~---  243 (377)
                      .++++.+.++++-|+...|+..+.+.-+-.+..++++.. ....++++++.|...|.+. ..+++.+++.+.    +   
T Consensus       545 ~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~IFaGKAhP~d~-~gK~iIk~I~~va~~in~dp  623 (824)
T d2gj4a1         545 HINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYH-MAKMIIKLITAIGDVVNHDP  623 (824)
T ss_dssp             CCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCH-HHHHHHHHHHHHHHHHTTCT
T ss_pred             CCCcchhhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEEEeCCCCCccH-HHHHHHHHHHHHHHHHhcCh
Confidence            477888999999999999999884433322333333321 1234689999999877663 445555544432    1   


Q ss_pred             -C--CCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCCcccceec--CcceeeecCC
Q 017085          244 -I--QDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN--GTTGLLHPVG  316 (377)
Q Consensus       244 -~--~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~~~e~~~~--~~~g~~~~~~  316 (377)
                       +  ..+|.|+..-  .-...++.+|||.+..|....|.+|++-+-+|.-|.+.+++--|...|+.++  +.|||.+...
T Consensus       624 ~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~fG~~  703 (824)
T d2gj4a1         624 VVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMR  703 (824)
T ss_dssp             TTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCC
T ss_pred             hhccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHhcCcccEEEeCCC
Confidence             1  1268888864  3455678999999998887799999999999999999999998998888764  6789988543

>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Triterpene UDP-glucosyl transferase UGT71G1
species: Medicago truncatula [TaxId: 3880]

Probab=98.39  E-value=1.6e-06  Score=77.52  Aligned_cols=83  Identities=17%  Similarity=0.090  Sum_probs=57.2

Q ss_pred             CCcEEEecCcC-CHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCC----CCcccce-ecCcceeeecCCC-
Q 017085          245 QDRVHFVNKTL-TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA----GGTTEIV-VNGTTGLLHPVGK-  317 (377)
Q Consensus       245 ~~~v~~~g~~~-~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~----~~~~e~~-~~~~~g~~~~~~~-  317 (377)
                      ++++.+..+.. .....+..+|++|      .-|..+++.||+.+|+|+|+...    ...+..+ +..+.|+..+... 
T Consensus       329 ~~n~~v~~~~pq~~~l~~p~~~~fI------tHGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~  402 (461)
T d2acva1         329 EGKGMICGWAPQVEVLAHKAIGGFV------SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR  402 (461)
T ss_dssp             HCSEEEESSCCHHHHHHSTTEEEEE------ECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCC
T ss_pred             CCCeEEEecCCHHHHHhcccCCEEE------ecCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeecccc
Confidence            35677766642 2223457889998      44556799999999999999753    3344443 4556787765431 


Q ss_pred             -----CChhHHHHHHHHHhhC
Q 017085          318 -----EGITPLAKNIVKLATH  333 (377)
Q Consensus       318 -----~~~~~la~~i~~l~~~  333 (377)
                           .+.++++++|.+++++
T Consensus       403 ~~~~~~t~~~l~~a~~~vl~~  423 (461)
T d2acva1         403 KGSDVVAAEEIEKGLKDLMDK  423 (461)
T ss_dssp             TTCCCCCHHHHHHHHHHHTCT
T ss_pred             ccCCccCHHHHHHHHHHHhhC
Confidence                 2378999999999974

>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: (Iso)flavonoid glycosyltransferase
species: Medicago truncatula [TaxId: 3880]

Probab=97.72  E-value=0.00039  Score=61.57  Aligned_cols=93  Identities=17%  Similarity=0.111  Sum_probs=68.0

Q ss_pred             CCcEEEecCcCCHHHHH--HhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCC----CCcccce-ecCcceeeecCCC
Q 017085          245 QDRVHFVNKTLTVAPYL--AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA----GGTTEIV-VNGTTGLLHPVGK  317 (377)
Q Consensus       245 ~~~v~~~g~~~~~~~~~--~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~----~~~~e~~-~~~~~g~~~~~~~  317 (377)
                      ++|+.+..+.. ..+++  ..++++|      .-|..+++.||+.+|+|+|+...    ......+ +..+.|...+. +
T Consensus       345 ~~Nv~~~~~~P-q~~lL~hp~~~~fI------tHGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~~-~  416 (473)
T d2pq6a1         345 ADRGLIASWCP-QDKVLNHPSIGGFL------THCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDT-N  416 (473)
T ss_dssp             TTTEEEESCCC-HHHHHTSTTEEEEE------ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCS-S
T ss_pred             cCceEEeeeCC-HHHHhcCCcCcEEE------ecCCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeCC-C
Confidence            46899998864 44567  5778888      44556799999999999999853    3344444 34468888774 3


Q ss_pred             CChhHHHHHHHHHhhCHHHHHHHHHHHHH
Q 017085          318 EGITPLAKNIVKLATHVERRLTMGKRGYE  346 (377)
Q Consensus       318 ~~~~~la~~i~~l~~~~~~~~~~~~~~~~  346 (377)
                      .+.++++++|.++++|+.. ++++++|.+
T Consensus       417 ~t~~~l~~ai~~vl~d~~~-~~~r~~a~~  444 (473)
T d2pq6a1         417 VKREELAKLINEVIAGDKG-KKMKQKAME  444 (473)
T ss_dssp             CCHHHHHHHHHHHHTSHHH-HHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHcCChH-HHHHHHHHH
Confidence            4589999999999999862 456666655

>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]

Probab=97.38  E-value=0.00057  Score=60.25  Aligned_cols=94  Identities=15%  Similarity=0.062  Sum_probs=67.0

Q ss_pred             CCcEEEecCcCCHHHHH--HhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCCC----cccceec-CcceeeecCCC
Q 017085          245 QDRVHFVNKTLTVAPYL--AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVN-GTTGLLHPVGK  317 (377)
Q Consensus       245 ~~~v~~~g~~~~~~~~~--~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~~----~~e~~~~-~~~g~~~~~~~  317 (377)
                      +.++.+..+..+ .+++  ..+++++      .-|...++.||+.+|+|+|+....+    ....+.+ .+.|...+...
T Consensus       318 ~~nv~~~~~~pq-~~lL~hp~~~~fI------tHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~  390 (450)
T d2c1xa1         318 RGYGMVVPWAPQ-AEVLAHEAVGAFV------THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGV  390 (450)
T ss_dssp             TTTEEEESCCCH-HHHHTSTTEEEEE------ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGS
T ss_pred             cccccccccCCh-HhhhccCceeEEE------ccCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCCC
Confidence            468888888633 3556  5677777      3455679999999999999986442    3444543 47898887765


Q ss_pred             CChhHHHHHHHHHhhCHHHHHHHHHHHHH
Q 017085          318 EGITPLAKNIVKLATHVERRLTMGKRGYE  346 (377)
Q Consensus       318 ~~~~~la~~i~~l~~~~~~~~~~~~~~~~  346 (377)
                      .+.+++.++|.++++|+.. +++.+++.+
T Consensus       391 ~t~~~l~~ai~~vL~d~~y-~~~~~r~~~  418 (450)
T d2c1xa1         391 FTKSGLMSCFDQILSQEKG-KKLRENLRA  418 (450)
T ss_dssp             CCHHHHHHHHHHHHHSHHH-HHHHHHHHH
T ss_pred             cCHHHHHHHHHHHhcCcHH-HHHHHHHHH
Confidence            5589999999999999863 344444443

>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Hydroquinone glucosyltransferase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.88  E-value=0.0015  Score=57.56  Aligned_cols=85  Identities=12%  Similarity=0.053  Sum_probs=60.8

Q ss_pred             CCCcEEEecCcCCHHHHH--HhcCEEEecCCCCCCccchHHHHHHHcCCcEEEeCCC----Ccccce-ecCcceeeecCC
Q 017085          244 IQDRVHFVNKTLTVAPYL--AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIV-VNGTTGLLHPVG  316 (377)
Q Consensus       244 ~~~~v~~~g~~~~~~~~~--~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~~~----~~~e~~-~~~~~g~~~~~~  316 (377)
                      .++||.+.++..+. ++|  ..++++|      .-|..+++.||+.+|+|+|+....    .....+ +.-+.|......
T Consensus       332 ~~~nv~~~~w~Pq~-~lL~hp~~~~fV------tHGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~  404 (471)
T d2vcha1         332 KKRGFVIPFWAPQA-QVLAHPSTGGFL------THCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAG  404 (471)
T ss_dssp             TTTEEEEESCCCHH-HHHHSTTEEEEE------ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCC
T ss_pred             cCCCeeecccCCHH-HHhcCccCCEEE------ecCCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecC
Confidence            35789999997443 677  4677888      445567999999999999998543    234434 333577766443


Q ss_pred             C---CChhHHHHHHHHHhhCHH
Q 017085          317 K---EGITPLAKNIVKLATHVE  335 (377)
Q Consensus       317 ~---~~~~~la~~i~~l~~~~~  335 (377)
                      +   .+.++++++|.++++|++
T Consensus       405 ~~~~~t~~~l~~ai~~vl~~~~  426 (471)
T d2vcha1         405 DDGLVRREEVARVVKGLMEGEE  426 (471)
T ss_dssp             TTSCCCHHHHHHHHHHHHTSTH
T ss_pred             CCCcCCHHHHHHHHHHHhCCcH
Confidence            2   247999999999999864

>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: ADP-heptose LPS heptosyltransferase II
domain: ADP-heptose LPS heptosyltransferase II
species: Escherichia coli [TaxId: 562]

Probab=96.49  E-value=0.027  Score=47.26  Aligned_cols=111  Identities=13%  Similarity=0.127  Sum_probs=65.5

Q ss_pred             HHHHHHHhCCCCCCeEEE-Eec-cccccch--hHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHH
Q 017085          164 REHVRESLGVRNEDLLFA-IIN-SVSRGKG--QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYV  239 (377)
Q Consensus       164 ~~~~r~~~~~~~~~~~i~-~~G-~~~~~Kg--~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~  239 (377)
                      +....+++++..+...++ ..| +..+.|.  .+...+.+..+.+         .+.+++++|...     ..+......
T Consensus       167 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~---------~~~~ivl~g~~~-----e~~~~~~~~  232 (348)
T d1pswa_         167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID---------EGYQVVLFGSAK-----DHEAGNEIL  232 (348)
T ss_dssp             HHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH---------TTCEEEECCCGG-----GHHHHHHHH
T ss_pred             HHHHHHHhccccCCCeEEeccccchhhccccchHHHhhhHHHHhh---------cCCccccccccc-----hHHHHHHHH
Confidence            345566777766665444 443 3233343  4445555554433         457788888752     233333322


Q ss_pred             HhcC---CCCcEEEecCc--CCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEEEe
Q 017085          240 MQKK---IQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT  295 (377)
Q Consensus       240 ~~~~---~~~~v~~~g~~--~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s  295 (377)
                      +...   ...-+.+.|..  .++..+++.||++|.+..      | .+--|.++|+|+|+-
T Consensus       233 ~~~~~~~~~~~~~l~g~~sl~el~~li~~a~l~I~~Dt------g-~~HlAaa~g~p~i~l  286 (348)
T d1pswa_         233 AALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDS------G-LMHVAAALNRPLVAL  286 (348)
T ss_dssp             TTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESS------H-HHHHHHHTTCCEEEE
T ss_pred             HhhhcccccccccccCCccHHHHHHHHhcceeEeecCc------c-HHHHHHHcCCCEEEE
Confidence            2211   12234555643  788899999999997764      2 456799999999976

>d1i3ca_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Response regulator for cyanobacterial phytochrome
species: Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]

Probab=91.24  E-value=1.5  Score=30.79  Aligned_cols=112  Identities=10%  Similarity=0.143  Sum_probs=68.7

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh---------cCEEEecCCCCCCccchHHHH
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA---------IDVLVQNSQAWGECFGRITIE  284 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~---------adv~l~ps~~~~e~~~~~~~E  284 (377)
                      |.-+++|+-+..    .....+....++.|+...|.....-.+..++++.         -|++++=.. -.+.-|..+++
T Consensus         2 ppk~ILiVdD~~----~~~~~l~~~L~~~g~~~~v~~a~~g~~Al~~l~~~~~~~~~~~pdlIllD~~-mP~~~G~el~~   76 (144)
T d1i3ca_           2 PPKVILLVEDSK----ADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQQQGEYENSPRPNLILLDLN-LPKKDGREVLA   76 (144)
T ss_dssp             CCEEEEEECCCH----HHHHHHHHHHHSCCSCEEEEEECSHHHHHHHHTTCGGGTTCCCCSEEEECSC-CSSSCHHHHHH
T ss_pred             CCCEEEEEECCH----HHHHHHHHHHHHcCCCeEEEEECCHHHHHHHHHhchhhhccCCCCEEEEECc-cccccchHHHH
Confidence            555677776542    3456666777777765456555544455556543         367664322 13445777777


Q ss_pred             HHH-----cCCcEEEeC-CCC---cccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          285 AMA-----FQLPVLGTA-AGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       285 a~a-----~g~PvI~s~-~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                      .+-     ..+|||.-. .+.   ..+..+-|.++++..+-+  .++|.+.|..+..
T Consensus        77 ~ir~~~~~~~iPvi~lT~~~~~~~~~~a~~~Ga~~yl~KP~~--~~~L~~~i~~l~~  131 (144)
T d1i3ca_          77 EIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRN--LKDLFKMVQGIES  131 (144)
T ss_dssp             HHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSS--HHHHHHHHHHHHH
T ss_pred             HHHhCcccCCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCC--HHHHHHHHHHHHH
Confidence            763     357877543 332   233344578899999988  9999988877643

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=88.83  E-value=0.68  Score=30.13  Aligned_cols=68  Identities=16%  Similarity=0.249  Sum_probs=42.8

Q ss_pred             cHhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEccchhHHHhhhcccEEEEcCch--hhhHHHHHhhcC
Q 017085            2 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAV--AGKWLDAVLKED   79 (377)
Q Consensus         2 ~la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~--~~~~~~~~~~~~   79 (377)
                      .||+.|.++||+|+---....        .....+...|+.+........+   .++|+|+..+..  ....+..+...+
T Consensus        23 ~LA~~L~~~G~~VsGSD~~~~--------~~~~~L~~~Gi~v~~g~~~~~i---~~~d~vV~S~AI~~~npel~~A~~~g   91 (96)
T d1p3da1          23 GIAEILLNEGYQISGSDIADG--------VVTQRLAQAGAKIYIGHAEEHI---EGASVVVVSSAIKDDNPELVTSKQKR   91 (96)
T ss_dssp             HHHHHHHHHTCEEEEEESCCS--------HHHHHHHHTTCEEEESCCGGGG---TTCSEEEECTTSCTTCHHHHHHHHTT
T ss_pred             HHHHHHHhCCCEEEEEeCCCC--------hhhhHHHHCCCeEEECCccccC---CCCCEEEECCCcCCCCHHHHHHHHcC
Confidence            379999999999997643321        2334555688888765544433   468999887643  333444444445


Q ss_pred             C
Q 017085           80 V   80 (377)
Q Consensus        80 ~   80 (377)
                      +
T Consensus        92 i   92 (96)
T d1p3da1          92 I   92 (96)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d1k68a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpA [TaxId: 1188]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Response regulator for cyanobacterial phytochrome
species: Calothrix sp. pcc 7601, RcpA [TaxId: 1188]

Probab=88.78  E-value=2.5  Score=29.38  Aligned_cols=108  Identities=9%  Similarity=0.111  Sum_probs=63.0

Q ss_pred             EEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh---------cCEEEecCCCCCCccchHHHHHHH
Q 017085          217 HAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA---------IDVLVQNSQAWGECFGRITIEAMA  287 (377)
Q Consensus       217 ~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~---------adv~l~ps~~~~e~~~~~~~Ea~a  287 (377)
                      +++++-+..    .....+....++.|....|.....-.+..+++..         -|++++=..= .+.-|..+++.+-
T Consensus         4 rILiVDD~~----~~~~~l~~~L~~~g~~~~v~~a~~g~eAl~~l~~~~~~~~~~~pdlillD~~m-P~~dG~el~~~ir   78 (140)
T d1k68a_           4 KIFLVEDNK----ADIRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGEYANASRPDLILLDLNL-PKKDGREVLAEIK   78 (140)
T ss_dssp             EEEEECCCH----HHHHHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSC-SSSCHHHHHHHHH
T ss_pred             cEEEEECCH----HHHHHHHHHHHHcCCCeEEEEECCHHHHHHHHHHhHHhhccCCCCEEEEeecc-ccccChHHHHHHH
Confidence            455555432    3455566666666655455555443455555533         3676643220 2334667776663


Q ss_pred             -----cCCcEEEeCC-CCc---ccceecCcceeeecCCCCChhHHHHHHHHHh
Q 017085          288 -----FQLPVLGTAA-GGT---TEIVVNGTTGLLHPVGKEGITPLAKNIVKLA  331 (377)
Q Consensus       288 -----~g~PvI~s~~-~~~---~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~  331 (377)
                           ..+|||.-.. ...   .+..+-|.++++..|-+  .++|.+.|..++
T Consensus        79 ~~~~~~~iPvI~ls~~~~~~~~~~a~~~Ga~~yl~KP~~--~~~L~~~i~~i~  129 (140)
T d1k68a_          79 SDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSAN--LSQLFQIVKGIE  129 (140)
T ss_dssp             HSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSS--HHHHHHHHHHHH
T ss_pred             hCcccCCCcEEEEeCCCCHHHHHHHHHCCCCEEEECCCC--HHHHHHHHHHHH
Confidence                 3578876543 322   23334577899999988  999999988764

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=86.45  E-value=0.53  Score=30.16  Aligned_cols=68  Identities=18%  Similarity=0.211  Sum_probs=42.4

Q ss_pred             HhhHHHhcCceEEEEEecCCCcchhHhhhhhhhhcccCceEEEccchhHHHhhhcccEEEEcCch--hhhHHHHHhhcCC
Q 017085            3 LAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAV--AGKWLDAVLKEDV   80 (377)
Q Consensus         3 la~~L~~~G~eV~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~--~~~~~~~~~~~~~   80 (377)
                      ||+.|+++||+|+---....        .....++..|+++........+   .++|+|+..+..  ....+..+...++
T Consensus        17 LA~~L~~~G~~VsGSD~~~~--------~~t~~L~~~Gi~i~~gh~~~~i---~~~d~vV~SsAI~~~npel~~A~~~gI   85 (89)
T d1j6ua1          17 VALHEFSNGNDVYGSNIEET--------ERTAYLRKLGIPIFVPHSADNW---YDPDLVIKTPAVRDDNPEIVRARMERV   85 (89)
T ss_dssp             HHHHHHHTTCEEEEECSSCC--------HHHHHHHHTTCCEESSCCTTSC---CCCSEEEECTTCCTTCHHHHHHHHTTC
T ss_pred             HHHHHHhCCCeEEEEeCCCC--------hhHHHHHHCCCeEEeeeccccc---CCCCEEEEecCcCCCCHHHHHHHHcCC
Confidence            79999999999987642221        1334577889888653332222   468999888643  3344555555555


Q ss_pred             C
Q 017085           81 P   81 (377)
Q Consensus        81 ~   81 (377)
                      |
T Consensus        86 p   86 (89)
T d1j6ua1          86 P   86 (89)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.41  E-value=2.3  Score=31.18  Aligned_cols=72  Identities=13%  Similarity=0.090  Sum_probs=48.3

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--hcCEEEecCCCCCCccchHHHHHHHcCCc
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLP  291 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~--~adv~l~ps~~~~e~~~~~~~Ea~a~g~P  291 (377)
                      ++++++-+.+.      ..+..+..+++++++....+..   ++.++++  ..|+++..+.  ...-.-.+.+++..|++
T Consensus        24 ~~~~i~ai~d~------~~~~~~~~~~~~~~~~~~~~~~---~~~~ll~~~~iD~v~I~tp--~~~h~~~~~~~l~~g~~   92 (184)
T d1ydwa1          24 PNATISGVASR------SLEKAKAFATANNYPESTKIHG---SYESLLEDPEIDALYVPLP--TSLHVEWAIKAAEKGKH   92 (184)
T ss_dssp             TTEEEEEEECS------SHHHHHHHHHHTTCCTTCEEES---SHHHHHHCTTCCEEEECCC--GGGHHHHHHHHHTTTCE
T ss_pred             CCCEEEEEEeC------CccccccchhccccccceeecC---cHHHhhhccccceeeeccc--chhhcchhhhhhhccce
Confidence            67777655443      2355667778888776666554   4555553  4678887775  44444567899999999


Q ss_pred             EEEeC
Q 017085          292 VLGTA  296 (377)
Q Consensus       292 vI~s~  296 (377)
                      |++-.
T Consensus        93 v~~EK   97 (184)
T d1ydwa1          93 ILLEK   97 (184)
T ss_dssp             EEECS
T ss_pred             eeccc
Confidence            99864

>d1k66a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpB [TaxId: 1188]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Response regulator for cyanobacterial phytochrome
species: Calothrix sp. pcc 7601, RcpB [TaxId: 1188]

Probab=85.96  E-value=3.9  Score=28.71  Aligned_cols=109  Identities=8%  Similarity=0.083  Sum_probs=68.0

Q ss_pred             EEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh------------cCEEEecCCCCCCccchHHHH
Q 017085          217 HAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA------------IDVLVQNSQAWGECFGRITIE  284 (377)
Q Consensus       217 ~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~------------adv~l~ps~~~~e~~~~~~~E  284 (377)
                      +++||-+..    .....++...++.|+...|.....-.+..+++..            .|++++=.. -.+.-|..+++
T Consensus         8 ~ILiVDD~~----~~~~~l~~~L~~~g~~~~v~~a~~g~eAl~~l~~~~~~~~~~~~~~pdlillD~~-mP~~~G~el~~   82 (149)
T d1k66a_           8 PLLVVEDSD----EDFSTFQRLLQREGVVNPIYRCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLN-LPGTDGREVLQ   82 (149)
T ss_dssp             CEEEECCCH----HHHHHHHHHHHHTTBCSCEEEECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSC-CSSSCHHHHHH
T ss_pred             cEEEEECCH----HHHHHHHHHHHHcCCceEEEEECChHHHHHHHHhhccccccccccCCCeEEcccc-ccCCCcHHHHH
Confidence            456665542    4566777778887775556554443455566643            466664222 02334777777


Q ss_pred             HHH-----cCCcEEEeC-CCCc---ccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          285 AMA-----FQLPVLGTA-AGGT---TEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       285 a~a-----~g~PvI~s~-~~~~---~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                      .+-     ..+|||+-. .+..   ......|.++++..|-+  .++|.+.|.+++.
T Consensus        83 ~ir~~~~~~~ipiI~lT~~~~~~~~~~~~~~Ga~~~l~KP~~--~~~L~~~i~~~l~  137 (149)
T d1k66a_          83 EIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIVKPLE--IDRLTETVQTFIK  137 (149)
T ss_dssp             HHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSS--HHHHHHHHHHHHH
T ss_pred             HHHhccccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEECCCC--HHHHHHHHHHHHH
Confidence            763     368887643 3322   23344578899999987  9999999988774

>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Response regulator PleD, receiver domain
species: Caulobacter crescentus [TaxId: 155892]

Probab=85.00  E-value=4.4  Score=27.96  Aligned_cols=107  Identities=13%  Similarity=0.066  Sum_probs=64.4

Q ss_pred             EEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHH-----cC
Q 017085          217 HAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMA-----FQ  289 (377)
Q Consensus       217 ~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a-----~g  289 (377)
                      +++|+-+.+    ...+.+....++.|.  .|.....-.+..+.+..  .|++++-..- .+.-|..+++.+-     ..
T Consensus         3 rILiVDD~~----~~~~~l~~~L~~~g~--~v~~a~~~~eal~~~~~~~~dlil~D~~~-p~~~G~~~~~~ir~~~~~~~   75 (139)
T d1w25a1           3 RILVVDDIE----ANVRLLEAKLTAEYY--EVSTAMDGPTALAMAARDLPDIILLDVMM-PGMDGFTVCRKLKDDPTTRH   75 (139)
T ss_dssp             EEEEECSST----THHHHHHHHHHHTTC--EEEEESSHHHHHHHHHHHCCSEEEEESCC-SSSCHHHHHHHHHHSTTTTT
T ss_pred             EEEEEECCH----HHHHHHHHHHHHCCC--EEEEEccchhhhhhhhcccceeeeeeccc-cCCCchHHHHHhhhcccccC
Confidence            556665543    356667777777665  35554443444444433  6777654321 3334566665543     45


Q ss_pred             CcEEEe-CCCCcc---cceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          290 LPVLGT-AAGGTT---EIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       290 ~PvI~s-~~~~~~---e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                      +|||.. ..+...   +.+..|.++++..|-+  .++|...|..++.
T Consensus        76 ~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~--~~~L~~~i~~~lr  120 (139)
T d1w25a1          76 IPVVLITALDGRGDRIQGLESGASDFLTKPID--DVMLFARVRSLTR  120 (139)
T ss_dssp             SCEEEEECSSCHHHHHHHHHHTCCEEEESSCC--HHHHHHHHHHHHH
T ss_pred             CCEEEEEcCCCHHHHHHHHHcCCCEEEECCCC--HHHHHHHHHHHHH
Confidence            788764 333322   2345588999999988  9999999887764

>d1p6qa_ c.23.1.1 (A:) CheY protein {Sinorhizobium meliloti, CheY2 [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Sinorhizobium meliloti, CheY2 [TaxId: 382]

Probab=84.88  E-value=3.7  Score=27.97  Aligned_cols=111  Identities=11%  Similarity=0.089  Sum_probs=69.7

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHH----
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMA----  287 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a----  287 (377)
                      ..++++|+-+..    .....+.+..++.|.. .|.....-++..+++..  .|++++=.. -.+.-|..+++.+-    
T Consensus         5 ~~~kILiVDD~~----~~~~~l~~~L~~~g~~-~v~~a~~~~~al~~l~~~~~dlii~D~~-mP~~~G~el~~~lr~~~~   78 (129)
T d1p6qa_           5 EKIKVLIVDDQV----TSRLLLGDALQQLGFK-QITAAGDGEQGMKIMAQNPHHLVISDFN-MPKMDGLGLLQAVRANPA   78 (129)
T ss_dssp             SCCCEEEECSSH----HHHHHHHHHHHTTTCS-CEECCSSHHHHHHHHHTSCCSEEEECSS-SCSSCHHHHHHHHTTCTT
T ss_pred             CCCEEEEEECCH----HHHHHHHHHHHHCCCe-EEEEECCHHHHHHHHHhCCCCeEEeeee-cCCCChHHHHHHHHhCcc
Confidence            346777776542    4566677777877763 35555443455556654  477664322 14445778888773    


Q ss_pred             -cCCcEEEeCCCCcc----cceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          288 -FQLPVLGTAAGGTT----EIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       288 -~g~PvI~s~~~~~~----e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                       ..+|+|.....+-.    +...-|.++++..|-+  .++|..+|.+++.
T Consensus        79 ~~~~pii~lt~~~~~~~~~~a~~~G~~~~l~KP~~--~~~L~~~i~~vl~  126 (129)
T d1p6qa_          79 TKKAAFIILTAQGDRALVQKAAALGANNVLAKPFT--IEKMKAAIEAVFG  126 (129)
T ss_dssp             STTCEEEECCSCCCHHHHHHHHHHTCSCEECCCSS--HHHHHHHHHHHHH
T ss_pred             cCCCeEEEEEecCCHHHHHHHHHCCCCEEEECCCC--HHHHHHHHHHHHH
Confidence             45787764322222    2334477889999988  9999999988764

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.06  E-value=0.47  Score=32.53  Aligned_cols=47  Identities=19%  Similarity=0.288  Sum_probs=32.1

Q ss_pred             CcHhhHHHhcCceEEEEEecCC--CcchhHhhhhhhhhcccCceEEEcc
Q 017085            1 MELAFLLRGVGTKVNWITIQKP--SEEDEVIYSLEHKMWDRGVQVISAK   47 (377)
Q Consensus         1 ~~la~~L~~~G~eV~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   47 (377)
                      +|+|..|++.|.+|+++....-  .........+...+++.|++++...
T Consensus        33 ~E~A~~l~~lG~~Vtii~~~~~l~~~D~~~~~~l~~~l~~~Gv~i~~~~   81 (122)
T d1h6va2          33 LECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQF   81 (122)
T ss_dssp             HHHHHHHHHTTCCEEEEESSSSSTTSCHHHHHHHHHHHHHTTEEEEESC
T ss_pred             HHHHHHHhhcCCeEEEEEechhhccCCHHHHHHHHHHHHHCCCEEEECC
Confidence            4789999999999999974321  2223344456677777888886643

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=83.78  E-value=1.8  Score=32.94  Aligned_cols=98  Identities=10%  Similarity=0.057  Sum_probs=59.8

Q ss_pred             CCCeEEEEeccccccchhHHHHHHHHHHHHHHhhhcccCCCeEEEEEecCCCcccHHHHHHHHHHHhcCCCC-cEEEecC
Q 017085          175 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQD-RVHFVNK  253 (377)
Q Consensus       175 ~~~~~i~~~G~~~~~Kg~~~ll~a~~~l~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~-~v~~~g~  253 (377)
                      ..++.|+.+|-  ..-+...++.++.           ..++++++-+-+.      ..+..+..+++++++. .+.... 
T Consensus        31 ~~~iriaiIG~--G~~~~~~~~~~~~-----------~~~~~~ivav~d~------~~~~a~~~~~~~~i~~~~~~~~~-   90 (221)
T d1h6da1          31 DRRFGYAIVGL--GKYALNQILPGFA-----------GCQHSRIEALVSG------NAEKAKIVAAEYGVDPRKIYDYS-   90 (221)
T ss_dssp             CCCEEEEEECC--SHHHHHTHHHHTT-----------TCSSEEEEEEECS------CHHHHHHHHHHTTCCGGGEECSS-
T ss_pred             CCCEEEEEEcC--cHHHHHHHHHHHH-----------hCCCceEEEEecC------CHHHHHHHHHhhccccccccccC-
Confidence            45688888883  2222223444433           2367888744443      2466677788888753 233332 


Q ss_pred             cCCHHHHHH--hcCEEEecCCCCCCccchHHHHHHHcCCcEEEeC
Q 017085          254 TLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA  296 (377)
Q Consensus       254 ~~~~~~~~~--~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI~s~  296 (377)
                        ++.+++.  ..|+++..+.  ...-.-.+.+||..|++|++-.
T Consensus        91 --d~~ell~~~~iD~V~I~tp--~~~H~~~~~~al~~gk~v~~EK  131 (221)
T d1h6da1          91 --NFDKIAKDPKIDAVYIILP--NSLHAEFAIRAFKAGKHVMCEK  131 (221)
T ss_dssp             --SGGGGGGCTTCCEEEECSC--GGGHHHHHHHHHHTTCEEEECS
T ss_pred             --chhhhcccccceeeeeccc--hhhhhhHHHHhhhcchhhhcCC
Confidence              3444554  4677877665  4444567889999999999864

>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein FixJ, receiver domain
species: Rhizobium meliloti [TaxId: 382]

Probab=83.76  E-value=4.6  Score=27.16  Aligned_cols=109  Identities=12%  Similarity=0.168  Sum_probs=67.1

Q ss_pred             CeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHH---cC
Q 017085          215 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMA---FQ  289 (377)
Q Consensus       215 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a---~g  289 (377)
                      +.+++|+-+..    ...+.+....+..|.  .|......++..+++..  .|++++=.. -.+.-|..+++.+.   ..
T Consensus         3 ~~~ILiVDDd~----~~~~~l~~~L~~~g~--~v~~a~~~~~al~~~~~~~~dlvi~D~~-mp~~~G~e~~~~lr~~~~~   75 (123)
T d1dbwa_           3 DYTVHIVDDEE----PVRKSLAFMLTMNGF--AVKMHQSAEAFLAFAPDVRNGVLVTDLR-MPDMSGVELLRNLGDLKIN   75 (123)
T ss_dssp             CCEEEEEESSH----HHHHHHHHHHHHTTC--EEEEESCHHHHHHHGGGCCSEEEEEECC-STTSCHHHHHHHHHHTTCC
T ss_pred             CCEEEEEECCH----HHHHHHHHHHHHCCC--EEEEECCHHHHHHHHhhcCCcEEEEecc-CccccchHHHHHHHhcCCC
Confidence            46777776652    456777777777765  35544443444455443  366653222 13445777776654   46


Q ss_pred             CcEEEeC-CCCc---ccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          290 LPVLGTA-AGGT---TEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       290 ~PvI~s~-~~~~---~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                      +|+|.-. .+..   .+.++.|..+++..|-+  .++|.++|.++++
T Consensus        76 ~~iI~lt~~~~~~~~~~a~~~Ga~~yl~KP~~--~~~L~~~i~~a~e  120 (123)
T d1dbwa_          76 IPSIVITGHGDVPMAVEAMKAGAVDFIEKPFE--DTVIIEAIERASE  120 (123)
T ss_dssp             CCEEEEECTTCHHHHHHHHHTTCSEEEESSCC--HHHHHHHHHHHHT
T ss_pred             CeEEEEEeeCCHHHHHHHHHCCCCEEEECCCC--HHHHHHHHHHHHH
Confidence            7777543 3332   23344577889999988  9999999988764

>d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator (NarL), receiver domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Nitrate/nitrite response regulator (NarL), receiver domain
species: Escherichia coli [TaxId: 562]

Probab=82.91  E-value=5.5  Score=27.38  Aligned_cols=107  Identities=10%  Similarity=0.101  Sum_probs=58.8

Q ss_pred             eEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCc---CCHHHHHH--hcCEEEecCCCCCCccchHHHHHHHc--
Q 017085          216 VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT---LTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAF--  288 (377)
Q Consensus       216 ~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~---~~~~~~~~--~adv~l~ps~~~~e~~~~~~~Ea~a~--  288 (377)
                      ++++|+-+.+    ...+.++...+..+   .+...+..   .+..+.+.  ..|++++=..- .+.-|+.+++.+-.  
T Consensus         3 i~VLiVDD~~----~~r~~l~~~L~~~~---~~~~v~~a~~~~~al~~~~~~~~DlvllD~~m-P~~~G~el~~~ir~~~   74 (138)
T d1a04a2           3 ATILLIDDHP----MLRTGVKQLISMAP---DITVVGEASNGEQGIELAESLDPDLILLDLNM-PGMNGLETLDKLREKS   74 (138)
T ss_dssp             EEEEEECSCH----HHHHHHHHHHTTCT---TEEEEEEESSHHHHHHHHHHHCCSEEEEETTS-TTSCHHHHHHHHHHSC
T ss_pred             CEEEEECCCH----HHHHHHHHHHHhCC---CcEEEEEECCHHHHHHHHHhcCCCEEEEecCC-CCCCHHHHHHHHHhhC
Confidence            5666666542    23444554444332   23333322   23333333  36776653221 34456777766643  


Q ss_pred             -CCcEEEeC-CCC---cccceecCcceeeecCCCCChhHHHHHHHHHhh
Q 017085          289 -QLPVLGTA-AGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT  332 (377)
Q Consensus       289 -g~PvI~s~-~~~---~~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~  332 (377)
                       .+|+|... .+.   ..+.++.|..|++..+.+  .++|.++|.+++.
T Consensus        75 ~~~~vivlt~~~~~~~~~~a~~~Ga~~yl~Kp~~--~~~L~~~i~~v~~  121 (138)
T d1a04a2          75 LSGRIVVFSVSNHEEDVVTALKRGADGYLLKDME--PEDLLKALHQAAA  121 (138)
T ss_dssp             CCSEEEEEECCCCHHHHHHHHHTTCSEEEETTCC--HHHHHHHHHHHHH
T ss_pred             CCCCEEEEEEECCHHHHHHHHHcCCCEEEECCCC--HHHHHHHHHHHHC
Confidence             45555432 222   223344588999999988  9999999998765

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=81.09  E-value=5.1  Score=28.49  Aligned_cols=68  Identities=9%  Similarity=-0.028  Sum_probs=42.5

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEE
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL  293 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI  293 (377)
                      +++.++-+-+...      +......++++.+    +   .+++.++....|+++..+.  ...-.-.+..|+..|++|+
T Consensus        25 ~~~~i~~v~d~~~------~~~~~~~~~~~~~----~---~~~~~~l~~~~D~V~I~tp--~~~h~~~~~~al~~gk~V~   89 (164)
T d1tlta1          25 SDWTLQGAWSPTR------AKALPICESWRIP----Y---ADSLSSLAASCDAVFVHSS--TASHFDVVSTLLNAGVHVC   89 (164)
T ss_dssp             SSEEEEEEECSSC------TTHHHHHHHHTCC----B---CSSHHHHHTTCSEEEECSC--TTHHHHHHHHHHHTTCEEE
T ss_pred             CCcEEEEEEechh------Hhhhhhhhccccc----c---cccchhhhhhccccccccc--chhccccccccccccceee
Confidence            7888775544322      2233445555542    2   2456666788998887765  3444455678999999998


Q ss_pred             EeC
Q 017085          294 GTA  296 (377)
Q Consensus       294 ~s~  296 (377)
                      +-.
T Consensus        90 ~EK   92 (164)
T d1tlta1          90 VDK   92 (164)
T ss_dssp             EES
T ss_pred             ccc
Confidence            754

>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional activator sigm54 (NtrC1), N-terminal domain
species: Aquifex aeolicus [TaxId: 63363]

Probab=80.77  E-value=6.6  Score=26.91  Aligned_cols=100  Identities=18%  Similarity=0.201  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHh--cCEEEecCCCCCCccchHHHHHHH---cCCcEEE-eCCCC---c
Q 017085          230 KFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMA---FQLPVLG-TAAGG---T  300 (377)
Q Consensus       230 ~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~--adv~l~ps~~~~e~~~~~~~Ea~a---~g~PvI~-s~~~~---~  300 (377)
                      ...+.+....+..|.  .|......++..+.+..  .|++++-.. -.+.-|.-+++.+.   ..+|||. |..+.   .
T Consensus        11 ~~~~~l~~~L~~~g~--~v~~a~~~~eAl~~l~~~~~dlvilD~~-mp~~~G~e~~~~lr~~~~~~piI~lT~~~~~~~~   87 (137)
T d1ny5a1          11 VFRGLLEEYLSMKGI--KVESAERGKEAYKLLSEKHFNVVLLDLL-LPDVNGLEILKWIKERSPETEVIVITGHGTIKTA   87 (137)
T ss_dssp             HHHHHHHHHHHHHTC--EEEEESSHHHHHHHHHHSCCSEEEEESB-CSSSBHHHHHHHHHHHCTTSEEEEEEETTCHHHH
T ss_pred             HHHHHHHHHHHHCCC--EEEEECCHHHHHHHhhccccccchHHHh-hhhhhHHHHHHHHHHhCCCCCEEEEECCCCHHHH
Confidence            345566666666654  24444433444444433  566664322 14455666665553   4588775 33333   2


Q ss_pred             ccceecCcceeeecCCCCChhHHHHHHHHHhhCH
Q 017085          301 TEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHV  334 (377)
Q Consensus       301 ~e~~~~~~~g~~~~~~~~~~~~la~~i~~l~~~~  334 (377)
                      .+.+..|..+++..|-+  .+++...+.+++...
T Consensus        88 ~~a~~~Ga~dyl~KP~~--~~~L~~~i~~~l~~~  119 (137)
T d1ny5a1          88 VEAMKMGAYDFLTKPCM--LEEIELTINKAIEHR  119 (137)
T ss_dssp             HHHHTTTCCEEEEESCC--HHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCEEEeCCCC--HHHHHHHHHHHHHHH
Confidence            33455688899999988  999999998887543

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=80.22  E-value=4.6  Score=28.84  Aligned_cols=69  Identities=9%  Similarity=0.193  Sum_probs=43.9

Q ss_pred             CCeEEEEEecCCCcccHHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHhcCEEEecCCCCCCccchHHHHHHHcCCcEE
Q 017085          214 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL  293 (377)
Q Consensus       214 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~l~ps~~~~e~~~~~~~Ea~a~g~PvI  293 (377)
                      +++.++++...       .+..+...++++.+.  .+ ...+++.+  ...|+++..+.  ...---.+.+++-.|++|+
T Consensus        25 ~~~~~~~~d~~-------~~~~~~~~~~~~~~~--~~-~~~~~ll~--~~iD~V~I~tp--~~~H~~~~~~al~~gk~V~   90 (167)
T d1xeaa1          25 PDIELVLCTRN-------PKVLGTLATRYRVSA--TC-TDYRDVLQ--YGVDAVMIHAA--TDVHSTLAAFFLHLGIPTF   90 (167)
T ss_dssp             TTEEEEEECSC-------HHHHHHHHHHTTCCC--CC-SSTTGGGG--GCCSEEEECSC--GGGHHHHHHHHHHTTCCEE
T ss_pred             CCcEEEEEECC-------HHHHHHHHHhccccc--cc-ccHHHhcc--cccceeccccc--ccccccccccccccccccc
Confidence            77887765443       355667777776542  12 22234332  35798888776  4444456778999999999


Q ss_pred             EeC
Q 017085          294 GTA  296 (377)
Q Consensus       294 ~s~  296 (377)
                      +-.
T Consensus        91 ~EK   93 (167)
T d1xeaa1          91 VDK   93 (167)
T ss_dssp             EES
T ss_pred             cCC
Confidence            754