Citrus Sinensis ID: 017180
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 376 | ||||||
| 225457425 | 378 | PREDICTED: uncharacterized protein LOC10 | 0.986 | 0.981 | 0.782 | 1e-170 | |
| 356562836 | 373 | PREDICTED: uncharacterized protein LOC10 | 0.981 | 0.989 | 0.774 | 1e-167 | |
| 388497748 | 424 | unknown [Lotus japonicus] | 0.981 | 0.870 | 0.766 | 1e-166 | |
| 357477571 | 373 | hypothetical protein MTR_4g108630 [Medic | 0.986 | 0.994 | 0.764 | 1e-165 | |
| 388499866 | 373 | unknown [Medicago truncatula] | 0.986 | 0.994 | 0.762 | 1e-165 | |
| 449439268 | 374 | PREDICTED: uncharacterized protein LOC10 | 0.994 | 1.0 | 0.726 | 1e-160 | |
| 297733979 | 369 | unnamed protein product [Vitis vinifera] | 0.938 | 0.956 | 0.747 | 1e-158 | |
| 224127476 | 373 | predicted protein [Populus trichocarpa] | 0.984 | 0.991 | 0.705 | 1e-153 | |
| 18410661 | 370 | putative alpha/beta-hydrolase-like prote | 0.928 | 0.943 | 0.740 | 1e-152 | |
| 297839333 | 1221 | hypothetical protein ARALYDRAFT_339650 [ | 0.928 | 0.285 | 0.726 | 1e-150 |
| >gi|225457425|ref|XP_002284929.1| PREDICTED: uncharacterized protein LOC100260374 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 292/373 (78%), Positives = 335/373 (89%), Gaps = 2/373 (0%)
Query: 1 MAFSATFSISSSSSFTLSRKIYRPFLSQNVHSLKPTSLKASSSTSVDYSTASVVEKQSTP 60
MA SA S SSS LSRKI RP S + P SL +STS+DYS SV++K + P
Sbjct: 5 MASSAILHFSPSSSLLLSRKICRP--SVFTAAQFPRSLTIKASTSLDYSNVSVIDKSAAP 62
Query: 61 SKTGNWQWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVG 120
SKT NW+WKF++NSINIYYE++E+ES DP K+ILMIPTISDVSTVEEWRLVA+DIVQRVG
Sbjct: 63 SKTNNWKWKFEDNSINIYYEEYEKESSDPPKDILMIPTISDVSTVEEWRLVARDIVQRVG 122
Query: 121 KVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAA 180
KVNWRATI+DWPGLGYSDRPK+DYNADV+EKF+VD ++APD P+S +++DLV+FGGGHAA
Sbjct: 123 KVNWRATIIDWPGLGYSDRPKIDYNADVLEKFLVDFMSAPDCPISQTKNDLVVFGGGHAA 182
Query: 181 TLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYN 240
T+T+RAAKK LVKP AIAAVAPTWAGPLPIVFGRDS METRYGLLRGTLRAP VGWMMYN
Sbjct: 183 TITIRAAKKGLVKPAAIAAVAPTWAGPLPIVFGRDSDMETRYGLLRGTLRAPAVGWMMYN 242
Query: 241 MLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 300
MLVSNEKAIQSQYKSHVY++P+NVTP IVESRYALTKRKGARYVPAAFLTGLLDPVNSRE
Sbjct: 243 MLVSNEKAIQSQYKSHVYADPNNVTPSIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 302
Query: 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMV 360
EFL+LFA LEG++P+LVVST+GSP+RSKAEMEAL+GAKGV+KFVE+PGALLPQEEYPA+V
Sbjct: 303 EFLELFAALEGQIPVLVVSTKGSPKRSKAEMEALRGAKGVSKFVELPGALLPQEEYPAVV 362
Query: 361 AQELYQFLQQTFE 373
A+ELY+FLQ+ FE
Sbjct: 363 AEELYRFLQENFE 375
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356562836|ref|XP_003549674.1| PREDICTED: uncharacterized protein LOC100811912 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 288/372 (77%), Positives = 318/372 (85%), Gaps = 3/372 (0%)
Query: 1 MAFSATFSISSSSSFTLSRKIYRPFLSQNVHSLKPTSLKASSSTSVDYSTASVVEKQSTP 60
MA S TF SS L KI RPF +V L P LK +ST++DYS S +K S P
Sbjct: 1 MALSTTFMPPSSPKLNLYSKIRRPFYPHSVRFLNP--LKIRASTTLDYSNVSTNDK-SPP 57
Query: 61 SKTGNWQWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVG 120
KT NWQWKFK+N INIYYE+H +ESP+PS+NILM+PTISDVSTVEEWRLVA DI QR G
Sbjct: 58 LKTSNWQWKFKDNLINIYYEEHVKESPEPSQNILMMPTISDVSTVEEWRLVAGDIAQRNG 117
Query: 121 KVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAA 180
NWRATIVDWPGLGYSDRPKMDYNADV+EKF+VD IN+P+ P+ E+DL+IFGGGHAA
Sbjct: 118 NTNWRATIVDWPGLGYSDRPKMDYNADVLEKFLVDFINSPNGPMKQPENDLIIFGGGHAA 177
Query: 181 TLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYN 240
++ RAAKK LVKP AIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL+AP VGWMMYN
Sbjct: 178 SIVARAAKKGLVKPKAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLKAPAVGWMMYN 237
Query: 241 MLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 300
MLVSNE AIQSQYKSHVY+NPDNVTPGIVESRYALTKRKGARY+PAAFLTG LDPV SRE
Sbjct: 238 MLVSNENAIQSQYKSHVYANPDNVTPGIVESRYALTKRKGARYLPAAFLTGQLDPVTSRE 297
Query: 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMV 360
EFL+LF LEGK P+LVVST+GSP+RSKAEMEALKGAKGVTKFVEVPGALLPQEEYPA+V
Sbjct: 298 EFLELFTALEGKTPVLVVSTKGSPKRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPALV 357
Query: 361 AQELYQFLQQTF 372
A+ELYQFLQ+ F
Sbjct: 358 AEELYQFLQEYF 369
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388497748|gb|AFK36940.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust.
Identities = 285/372 (76%), Positives = 323/372 (86%), Gaps = 3/372 (0%)
Query: 1 MAFSATFSISSSSSFTLSRKIYRPFLSQNVHSLKPTSLKASSSTSVDYSTASVVEKQSTP 60
MA SATF + SS S L KI RPFLS +V+ + P LK +ST++DYS SV +K S P
Sbjct: 52 MALSATFMLPSSPSSNLCTKIRRPFLSHSVNLITP--LKIRASTTLDYSNVSVNDKPS-P 108
Query: 61 SKTGNWQWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVG 120
KTGNWQ KFK+NS+NIYYE+H +ES +P +NILM+PTISDVSTVEEWR VA DI QR G
Sbjct: 109 LKTGNWQRKFKDNSVNIYYEEHVKESTEPYQNILMMPTISDVSTVEEWRSVAGDIAQRNG 168
Query: 121 KVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAA 180
NWRATIVDWPGLGYSDRPK+DYNADV+EKF+VD IN+P+ P+ SESDLVIFGGGHAA
Sbjct: 169 SRNWRATIVDWPGLGYSDRPKIDYNADVLEKFLVDFINSPNGPIKQSESDLVIFGGGHAA 228
Query: 181 TLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYN 240
++ + AAKK LVKP AIAAVAPTWAG LPIVFGRDSSMETRYGLLRGTL+AP VGWMMYN
Sbjct: 229 SIVLHAAKKGLVKPKAIAAVAPTWAGLLPIVFGRDSSMETRYGLLRGTLKAPAVGWMMYN 288
Query: 241 MLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 300
MLVSNE AIQSQYKSHVY+NPDNV+P VESRYALTKRKGARY+PAAFLTGLLDPV SRE
Sbjct: 289 MLVSNENAIQSQYKSHVYANPDNVSPEFVESRYALTKRKGARYLPAAFLTGLLDPVKSRE 348
Query: 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMV 360
EFL+LF D EGK+P+LVVST+GSP+RSKAEMEALKGAKGV+KFVEVPGALLPQEEYP++V
Sbjct: 349 EFLELFVDFEGKIPVLVVSTKGSPKRSKAEMEALKGAKGVSKFVEVPGALLPQEEYPSVV 408
Query: 361 AQELYQFLQQTF 372
A+ELYQFLQ+ F
Sbjct: 409 AEELYQFLQEYF 420
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Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357477571|ref|XP_003609071.1| hypothetical protein MTR_4g108630 [Medicago truncatula] gi|355510126|gb|AES91268.1| hypothetical protein MTR_4g108630 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 286/374 (76%), Positives = 324/374 (86%), Gaps = 3/374 (0%)
Query: 1 MAFSATFSISSSSSFTLSRKIYRPFLSQNVHSLKPTSLKASSSTSVDYSTASVVEKQSTP 60
MA SATF S SS L K +PFLS +V+ LKP ++AS T++DYS S +S+P
Sbjct: 1 MALSATFITPSPSSSNLYTKFRKPFLSHSVYLLKPFKIRAS--TTLDYSNVSS-SDKSSP 57
Query: 61 SKTGNWQWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVG 120
KT NWQWKFK+N INIYYE+H +ES +PS+NILM+PTISDVSTVEEWRLVA+DI QR G
Sbjct: 58 LKTSNWQWKFKDNLINIYYEEHVKESSEPSQNILMMPTISDVSTVEEWRLVAEDIAQRSG 117
Query: 121 KVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAA 180
VN+R TIVDWPGLGYSDRPK+DYNADV+EKF+VD IN+P+ PV ++DLVI GGGHAA
Sbjct: 118 SVNYRTTIVDWPGLGYSDRPKIDYNADVLEKFLVDFINSPNGPVKQPDNDLVIIGGGHAA 177
Query: 181 TLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYN 240
++ VRAAKK LVKP AIAAVAPTW+GPLPIVFGRDSSMETRYGLLRGTL+AP VGWM+YN
Sbjct: 178 SIVVRAAKKGLVKPKAIAAVAPTWSGPLPIVFGRDSSMETRYGLLRGTLKAPAVGWMVYN 237
Query: 241 MLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 300
MLVSNE AIQSQYKSHVY+NPDNVTP IVESRYALTKR+GARY+PAAFLTGLLDPV SRE
Sbjct: 238 MLVSNENAIQSQYKSHVYANPDNVTPAIVESRYALTKRQGARYLPAAFLTGLLDPVTSRE 297
Query: 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMV 360
EFLQLFADLEGK+P+ VVST+GSP+RSKAEMEAL GAKGV KFVEVPGALLPQEEYPA+V
Sbjct: 298 EFLQLFADLEGKIPVFVVSTKGSPKRSKAEMEALNGAKGVCKFVEVPGALLPQEEYPALV 357
Query: 361 AQELYQFLQQTFEP 374
A+ELYQFLQQ F P
Sbjct: 358 AEELYQFLQQYFSP 371
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Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388499866|gb|AFK37999.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 285/374 (76%), Positives = 323/374 (86%), Gaps = 3/374 (0%)
Query: 1 MAFSATFSISSSSSFTLSRKIYRPFLSQNVHSLKPTSLKASSSTSVDYSTASVVEKQSTP 60
MA SATF S SS L K +PFLS +V+ LKP ++AS T++DYS S +S+P
Sbjct: 1 MALSATFITPSPSSSNLYTKFRKPFLSHSVYLLKPFKIRAS--TTLDYSNVSS-SDKSSP 57
Query: 61 SKTGNWQWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVG 120
KT NWQWKFK+N INIYYE+H +ES +PS+NILM+PTISDVSTVEEWRLVA+DI QR G
Sbjct: 58 LKTSNWQWKFKDNLINIYYEEHVKESSEPSQNILMMPTISDVSTVEEWRLVAEDIAQRSG 117
Query: 121 KVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAA 180
VN+R TIVDWPGLGYSDRPK+DYNADV+EKF+VD IN+P+ PV ++DLVI GGGHAA
Sbjct: 118 SVNYRTTIVDWPGLGYSDRPKIDYNADVLEKFLVDFINSPNGPVKQPDNDLVIIGGGHAA 177
Query: 181 TLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYN 240
++ VRAAKK LVKP AIAAVAPTW+GPLPIVFGRDSSMETRYGLLRGTL+AP VGWM+YN
Sbjct: 178 SIVVRAAKKGLVKPKAIAAVAPTWSGPLPIVFGRDSSMETRYGLLRGTLKAPAVGWMVYN 237
Query: 241 MLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 300
MLVSNE AIQSQYKSHVY+NPDNVTP IVESRYALTKR+GARY+PAAFLTGLLDPV SRE
Sbjct: 238 MLVSNENAIQSQYKSHVYANPDNVTPAIVESRYALTKRQGARYLPAAFLTGLLDPVTSRE 297
Query: 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMV 360
EFLQLFADLEGK+P+ VVST+GSP+RSKAEMEAL GAKGV KFVEVPGAL PQEEYPA+V
Sbjct: 298 EFLQLFADLEGKIPVFVVSTKGSPKRSKAEMEALNGAKGVCKFVEVPGALFPQEEYPALV 357
Query: 361 AQELYQFLQQTFEP 374
A+ELYQFLQQ F P
Sbjct: 358 AEELYQFLQQYFSP 371
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449439268|ref|XP_004137408.1| PREDICTED: uncharacterized protein LOC101217261 [Cucumis sativus] gi|449487002|ref|XP_004157467.1| PREDICTED: uncharacterized LOC101217261 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 273/376 (72%), Positives = 319/376 (84%), Gaps = 2/376 (0%)
Query: 1 MAFSATFSISSSSSFTLSRKIYRPFLSQNVHSLKPTSLKASSSTSVDYSTASVVEKQSTP 60
MAFSA S S S K RPF + LKP +++AS T++DYS S K STP
Sbjct: 1 MAFSAKLHPISPPSLVFSCKSRRPFSPHYAYFLKPLTIRAS--TTLDYSKTSSDPKSSTP 58
Query: 61 SKTGNWQWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVG 120
K NWQWKFK++ INIYYE++E +S D K+ILMIPTISDVSTVEEWR+VA+++VQ+
Sbjct: 59 LKASNWQWKFKDSLINIYYEEYEGQSSDSPKDILMIPTISDVSTVEEWRIVARELVQKDS 118
Query: 121 KVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAA 180
KVNWRATIVDWPGLG+SDRPKMDYNADVMEKF+VDLINAPD P+SSS+ DLV+FGGGHAA
Sbjct: 119 KVNWRATIVDWPGLGFSDRPKMDYNADVMEKFLVDLINAPDGPLSSSKDDLVVFGGGHAA 178
Query: 181 TLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYN 240
LT+RA K LVKP IAAVAPTWAGPLPIVFGRDS+ME+RYG LRGTLRAP VGWMMYN
Sbjct: 179 ALTIRATNKGLVKPRGIAAVAPTWAGPLPIVFGRDSTMESRYGFLRGTLRAPAVGWMMYN 238
Query: 241 MLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 300
+LVSNE AI+SQYKSHVY+NP+NVTP I+ESRYALTKR GARYVPAAFLTGLLDPV SRE
Sbjct: 239 ILVSNENAIESQYKSHVYANPENVTPEIIESRYALTKRDGARYVPAAFLTGLLDPVKSRE 298
Query: 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMV 360
EF+++FA L+GK+P+LVVSTE SP+RSKAEMEAL+GAKGV+KFVE+PGALLPQEEYP +V
Sbjct: 299 EFVEMFAGLDGKIPILVVSTEKSPKRSKAEMEALRGAKGVSKFVELPGALLPQEEYPTIV 358
Query: 361 AQELYQFLQQTFEPSD 376
A+EL+QFL++ FE +D
Sbjct: 359 AEELHQFLKENFEAAD 374
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297733979|emb|CBI15226.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 279/373 (74%), Positives = 317/373 (84%), Gaps = 20/373 (5%)
Query: 1 MAFSATFSISSSSSFTLSRKIYRPFLSQNVHSLKPTSLKASSSTSVDYSTASVVEKQSTP 60
MA SA S SSS LSRKI RP S + P SL +STS+DYS SV++K + P
Sbjct: 1 MASSAILHFSPSSSLLLSRKICRP--SVFTAAQFPRSLTIKASTSLDYSNVSVIDKSAAP 58
Query: 61 SKTGNWQWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVG 120
SKT NW+WKF++NSINIYYE++E+ES DP K+ILMIPTISDVSTVEEWRLVA+DIVQRVG
Sbjct: 59 SKTNNWKWKFEDNSINIYYEEYEKESSDPPKDILMIPTISDVSTVEEWRLVARDIVQRVG 118
Query: 121 KVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAA 180
KVNWRATI+DWPGLGYSDRPK+DYNADV+EKF+VD ++APD P+S +++DLV+FGGGHAA
Sbjct: 119 KVNWRATIIDWPGLGYSDRPKIDYNADVLEKFLVDFMSAPDCPISQTKNDLVVFGGGHAA 178
Query: 181 TLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYN 240
T+T+RAAKK LVKP AIAAVAPTWAGPLPIVFGRDS METRYGLLRGTLRAP VGWMMYN
Sbjct: 179 TITIRAAKKGLVKPAAIAAVAPTWAGPLPIVFGRDSDMETRYGLLRGTLRAPAVGWMMYN 238
Query: 241 MLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 300
MLVSNEKAIQSQYKSHVY++P+NVTP IVESRYALTKRKGARYVPAAFLTGLLDPVNSRE
Sbjct: 239 MLVSNEKAIQSQYKSHVYADPNNVTPSIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 298
Query: 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMV 360
EFL+LFA SKAEMEAL+GAKGV+KFVE+PGALLPQEEYPA+V
Sbjct: 299 EFLELFA------------------ASKAEMEALRGAKGVSKFVELPGALLPQEEYPAVV 340
Query: 361 AQELYQFLQQTFE 373
A+ELY+FLQ+ FE
Sbjct: 341 AEELYRFLQENFE 353
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127476|ref|XP_002329287.1| predicted protein [Populus trichocarpa] gi|222870741|gb|EEF07872.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 263/373 (70%), Positives = 311/373 (83%), Gaps = 3/373 (0%)
Query: 1 MAFSATFSISSSSSFTLSRKIYRPFLSQNVHSLKPTSLKASSSTSVDYSTASVVEKQSTP 60
MA ++ F ISSS SFTL K Y + Q + LKP SLKA+S++ T S+ KQ +P
Sbjct: 1 MAMASLF-ISSSPSFTLPPKTYTKY--QTAYFLKPFSLKAASTSVDQQPTISLAGKQPSP 57
Query: 61 SKTGNWQWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVG 120
K +WQWKF++ + IYYE+H +ESP+P+KNILM+P+ISDVSTVEEWR VA +IVQR
Sbjct: 58 FKANSWQWKFQDKVLTIYYEEHGKESPEPTKNILMLPSISDVSTVEEWRSVAGNIVQRAS 117
Query: 121 KVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAA 180
K+NWRA IVDWPGLGYSDRPK+DYN DVMEKF+ D I+APD P+ +DLVIFGGGHA
Sbjct: 118 KINWRAVIVDWPGLGYSDRPKLDYNVDVMEKFLTDFISAPDGPMKHFGNDLVIFGGGHAP 177
Query: 181 TLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYN 240
T+T+ AAKK LVK AIAAVAPTWAGPLPIVFGRDS++E RYGLLR TLR PGVGWMMYN
Sbjct: 178 TITLCAAKKGLVKLAAIAAVAPTWAGPLPIVFGRDSTIEMRYGLLRDTLRTPGVGWMMYN 237
Query: 241 MLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 300
+ VSNEKAI SQY+SHVY+NPDNVTP +V+SR ALTKRKGARY PA+FLTGLLDPV S+E
Sbjct: 238 VFVSNEKAIASQYRSHVYANPDNVTPDVVDSRIALTKRKGARYAPASFLTGLLDPVKSQE 297
Query: 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMV 360
EFL+LFADL+GK+P+LVVST+ SP+RSKA M+ALKGAKGV+KFVEVPGALLPQEEYP M+
Sbjct: 298 EFLELFADLDGKVPVLVVSTKSSPKRSKAVMQALKGAKGVSKFVEVPGALLPQEEYPTMI 357
Query: 361 AQELYQFLQQTFE 373
A+ELYQFLQ+ FE
Sbjct: 358 AEELYQFLQENFE 370
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18410661|ref|NP_565087.1| putative alpha/beta-hydrolase-like protein [Arabidopsis thaliana] gi|20465628|gb|AAM20145.1| unknown protein [Arabidopsis thaliana] gi|21436071|gb|AAM51236.1| unknown protein [Arabidopsis thaliana] gi|21593094|gb|AAM65043.1| unknown [Arabidopsis thaliana] gi|332197496|gb|AEE35617.1| putative alpha/beta-hydrolase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/358 (74%), Positives = 306/358 (85%), Gaps = 9/358 (2%)
Query: 17 LSRKIYRPFLSQNVHSLKPTSLKAS-SSTSVDYSTASVVEKQSTPSKTGNWQWKFKENSI 75
+ KI RPFL KP S++AS SS S+D EK +KT NWQWKFK NSI
Sbjct: 17 FTTKIRRPFLLLTPKYPKPVSVRASVSSISID-------EKLPVQTKTSNWQWKFKGNSI 69
Query: 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLG 135
IYYE+HERE + +KNILMIPTISDVSTVEEWR VA+DIVQR G VNWRATIVDWPGLG
Sbjct: 70 GIYYEEHEREKCESAKNILMIPTISDVSTVEEWRSVAKDIVQRDGDVNWRATIVDWPGLG 129
Query: 136 YSDRPKMDYNADVMEKFVVDLINAPDSPVS-SSESDLVIFGGGHAATLTVRAAKKNLVKP 194
YS RPKMDY+ DVMEKFVVD +N+P+SP+S S DLVI GGGHAATL +RA ++ L+KP
Sbjct: 130 YSARPKMDYDTDVMEKFVVDFMNSPESPMSQSGNDDLVIIGGGHAATLALRATQRGLLKP 189
Query: 195 TAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYK 254
+AIAAVAPTWAGPLPIVFGRDSSM +RYG+LRGTLRAPGVGWMMYNMLVSNEK+I+SQYK
Sbjct: 190 SAIAAVAPTWAGPLPIVFGRDSSMVSRYGMLRGTLRAPGVGWMMYNMLVSNEKSIESQYK 249
Query: 255 SHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLP 314
SHVY++ NVT I++SRY LTK+KG+RYVPAAFLTGLLDPV+SREEFLQLFADLEGKLP
Sbjct: 250 SHVYADQTNVTDAIIQSRYELTKQKGSRYVPAAFLTGLLDPVSSREEFLQLFADLEGKLP 309
Query: 315 LLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTF 372
++V+ST+G+P+RSKAEMEAL+GAKGV+KFVEV GALLPQEEYP++VAQELY FLQ+TF
Sbjct: 310 VMVMSTKGAPKRSKAEMEALRGAKGVSKFVEVEGALLPQEEYPSLVAQELYNFLQETF 367
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp. lyrata] gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/358 (72%), Positives = 302/358 (84%), Gaps = 9/358 (2%)
Query: 17 LSRKIYRPFLSQNVHSLKPTSLKASS-STSVDYSTASVVEKQSTPSKTGNWQWKFKENSI 75
S K RPFL K S++AS S S+D +K +KT WQWKFK NSI
Sbjct: 868 FSCKTRRPFLLLTPKYPKLVSVRASVPSISID-------DKSPVQTKTSTWQWKFKGNSI 920
Query: 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLG 135
IYYE+H RE + +KNILMIPTISDVSTVEEWR VA+DIVQR G+VNWRATIVDWPGLG
Sbjct: 921 GIYYEEHGREKCESAKNILMIPTISDVSTVEEWRSVAKDIVQRDGEVNWRATIVDWPGLG 980
Query: 136 YSDRPKMDYNADVMEKFVVDLINAPDSPVS-SSESDLVIFGGGHAATLTVRAAKKNLVKP 194
YS RPKMDY+ DVMEKFVVD +N+P+SP+S S DLVI GGGHAATL +RA ++ L+KP
Sbjct: 981 YSARPKMDYDTDVMEKFVVDFMNSPESPMSQSGNDDLVIMGGGHAATLAIRATQRGLLKP 1040
Query: 195 TAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYK 254
+AIAAVAPTWAGPLPIVFGRDSSM +RYG+LRGTLRAPGVGWMMYNMLVSNEK+I+SQYK
Sbjct: 1041 SAIAAVAPTWAGPLPIVFGRDSSMVSRYGMLRGTLRAPGVGWMMYNMLVSNEKSIESQYK 1100
Query: 255 SHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLP 314
SHVY++ NVT I++SRY LTK+KG+RYVPAAFLTGLLDPV+SREEFLQLFADLEGKLP
Sbjct: 1101 SHVYADQTNVTDAIIQSRYELTKQKGSRYVPAAFLTGLLDPVSSREEFLQLFADLEGKLP 1160
Query: 315 LLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTF 372
++V+ST+G+P+RSKAEMEAL+GAKGV+KFVEV GALLPQEEYP++VAQELY FLQ+TF
Sbjct: 1161 VMVMSTKGAPKRSKAEMEALRGAKGVSKFVEVEGALLPQEEYPSLVAQELYNFLQETF 1218
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 376 | ||||||
| TAIR|locus:2019170 | 370 | AT1G74640 "AT1G74640" [Arabido | 0.922 | 0.937 | 0.731 | 7.4e-137 |
| TAIR|locus:2019170 AT1G74640 "AT1G74640" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1340 (476.8 bits), Expect = 7.4e-137, P = 7.4e-137
Identities = 259/354 (73%), Positives = 298/354 (84%)
Query: 20 KIYRPFLSQNVHSLKPTSLKXXXXXXXXXXXXXXXEKQSTPSKTGNWQWKFKENSINIYY 79
KI RPFL KP S++ EK +KT NWQWKFK NSI IYY
Sbjct: 20 KIRRPFLLLTPKYPKPVSVRASVSSISID------EKLPVQTKTSNWQWKFKGNSIGIYY 73
Query: 80 EKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR 139
E+HERE + +KNILMIPTISDVSTVEEWR VA+DIVQR G VNWRATIVDWPGLGYS R
Sbjct: 74 EEHEREKCESAKNILMIPTISDVSTVEEWRSVAKDIVQRDGDVNWRATIVDWPGLGYSAR 133
Query: 140 PKMDYNADVMEKFVVDLINAPDSPVSSS-ESDLVIFGGGHAATLTVRAAKKNLVKPTAIA 198
PKMDY+ DVMEKFVVD +N+P+SP+S S DLVI GGGHAATL +RA ++ L+KP+AIA
Sbjct: 134 PKMDYDTDVMEKFVVDFMNSPESPMSQSGNDDLVIIGGGHAATLALRATQRGLLKPSAIA 193
Query: 199 AVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVY 258
AVAPTWAGPLPIVFGRDSSM +RYG+LRGTLRAPGVGWMMYNMLVSNEK+I+SQYKSHVY
Sbjct: 194 AVAPTWAGPLPIVFGRDSSMVSRYGMLRGTLRAPGVGWMMYNMLVSNEKSIESQYKSHVY 253
Query: 259 SNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVV 318
++ NVT I++SRY LTK+KG+RYVPAAFLTGLLDPV+SREEFLQLFADLEGKLP++V+
Sbjct: 254 ADQTNVTDAIIQSRYELTKQKGSRYVPAAFLTGLLDPVSSREEFLQLFADLEGKLPVMVM 313
Query: 319 STEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTF 372
ST+G+P+RSKAEMEAL+GAKGV+KFVEV GALLPQEEYP++VAQELY FLQ+TF
Sbjct: 314 STKGAPKRSKAEMEALRGAKGVSKFVEVEGALLPQEEYPSLVAQELYNFLQETF 367
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.132 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 376 344 0.00097 116 3 11 22 0.44 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 592 (63 KB)
Total size of DFA: 223 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.77u 0.16s 28.93t Elapsed: 00:00:01
Total cpu time: 28.77u 0.16s 28.93t Elapsed: 00:00:01
Start: Fri May 10 19:31:34 2013 End: Fri May 10 19:31:35 2013
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 376 | |||
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 4e-05 | |
| PLN02679 | 360 | PLN02679, PLN02679, hydrolase, alpha/beta fold fam | 0.001 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 0.002 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 4e-05
Identities = 49/249 (19%), Positives = 72/249 (28%), Gaps = 33/249 (13%)
Query: 124 WRATIVDWPGLGYSDRPKM--DYNADVMEKFVVDLINA-PDSPVSSSESDLVIF--GGGH 178
+ D G G S PK DY D + + + L++A V+ LV GG
Sbjct: 1 FDVIAFDLRGFGRSSPPKDFADYRFDDLAEDLEALLDALGLDKVN-----LVGHSMGGLI 55
Query: 179 AATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMM 238
A + + VK A+ V P T G L G L +
Sbjct: 56 ALAYAAKYPDR--VK--ALVLVGT----VHPAGLSSP---LTPRGNLLGLLLDNFFNRLY 104
Query: 239 --YNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPV 296
L+ S+ R+ T + A L V
Sbjct: 105 DSVEALLGRAIKQFQALGRPFVSDFLKQFELSSLIRFGET-LALDGLLGYALGYDL---V 160
Query: 297 NSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGAL-LPQEE 355
R L+ P L++ + P E L + V + A L Q E
Sbjct: 161 WDRSAALKDIDV-----PTLIIWGDDDPLVPPDASEKLAALFPNAQLVVIDDAGHLAQLE 215
Query: 356 YPAMVAQEL 364
P VA+ +
Sbjct: 216 KPDEVAELI 224
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|178283 PLN02679, PLN02679, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 27/197 (13%)
Query: 2 AFSATFSISSSSSFTLSRKIYRPFLSQNVHSLKPTSLKASSSTSVDYSTASVVEKQSTPS 61
A F +SSS+S + +R+I V + S SSS V A + E
Sbjct: 8 AMHHHFMLSSSTSASTTRRIGLRRDRACVRATASGSTAVSSSGGV---EAELEEIYERCK 64
Query: 62 KTGNWQWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGK 121
K W+WK E SIN Y K E +L++ +++ WR + +
Sbjct: 65 K---WKWK-GEYSIN-YLVKGSPEVTSSGPPVLLVHGFG--ASIPHWRRNIGVLAK---- 113
Query: 122 VNWRATIVDWPGLGYSDRPK-----MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGG 176
N+ +D G G SD+P M+ A+++ F+ +++ P + +S L
Sbjct: 114 -NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQKPTVLIGNSVGSL----- 167
Query: 177 GHAATLTVRAAKKNLVK 193
A + + ++LV+
Sbjct: 168 --ACVIAASESTRDLVR 182
|
Length = 360 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 39.6 bits (91), Expect = 0.002
Identities = 52/304 (17%), Positives = 87/304 (28%), Gaps = 36/304 (11%)
Query: 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWP 132
+ + + Y RE+ ++++ S+V WR V + + +R D
Sbjct: 8 DGVRLAY----REAGGGGPPLVLLHGFPGSSSV--WRPVFKVLPALAA--RYRVIAPDLR 59
Query: 133 GLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFG---GGHAATLTVRAAKK 189
G G SD Y+ + L++A +V+ G GG A
Sbjct: 60 GHGRSD--PAGYSLSAYADDLAALLDALGLE------KVVLVGHSMGGAVALALALRHPD 111
Query: 190 NLVKPTAIAAVAPTWAG-PLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKA 248
+ I P + + LL G A + L++ A
Sbjct: 112 RVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAA 171
Query: 249 IQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308
+ P A A L + + + A
Sbjct: 172 AARAGLAEALRAPL--------------LGAAAAAFARAARADLAAALLALLDRDLRAAL 217
Query: 309 LEGKLPLLVVSTEGSPRRSKAEMEALKGA-KGVTKFVEVPGAL-LPQEEYPAMVAQELYQ 366
+P L++ E P L A + V +PGA P E P A L
Sbjct: 218 ARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLA 277
Query: 367 FLQQ 370
FL++
Sbjct: 278 FLER 281
|
Length = 282 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 376 | |||
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| PLN02578 | 354 | hydrolase | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 100.0 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 100.0 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 100.0 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 100.0 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 100.0 | |
| PLN02965 | 255 | Probable pheophorbidase | 100.0 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 100.0 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.98 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.98 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.98 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.97 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.97 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.97 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.97 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.97 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.97 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.97 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.97 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.97 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.97 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.97 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.97 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.97 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.96 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.96 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.96 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.96 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.96 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.96 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.96 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.95 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.95 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.95 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.95 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.94 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.94 | |
| PLN02511 | 388 | hydrolase | 99.93 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.93 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.92 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.92 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.91 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.91 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.9 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.9 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.89 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.87 | |
| PRK10566 | 249 | esterase; Provisional | 99.85 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.85 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.85 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.84 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.84 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.83 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.82 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.81 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.8 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.78 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.78 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.78 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.77 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.75 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.75 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.74 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.73 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.72 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.71 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.7 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.69 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.68 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.68 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.67 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.64 | |
| PLN00021 | 313 | chlorophyllase | 99.63 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.62 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.58 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.56 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.56 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.55 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.54 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.54 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.53 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.52 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.5 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.5 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.49 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.48 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.46 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.42 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.42 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.41 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.39 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.38 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.33 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.33 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.33 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.3 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.29 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.29 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.29 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.24 | |
| PRK10115 | 686 | protease 2; Provisional | 99.22 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.18 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.16 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.14 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.11 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.05 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.04 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 99.02 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.0 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 99.0 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 98.98 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 98.96 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.96 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 98.96 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 98.95 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 98.94 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 98.93 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.9 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.86 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.84 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 98.83 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 98.8 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 98.8 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.8 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 98.78 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.77 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.69 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 98.66 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.66 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.65 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 98.63 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.62 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.59 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.56 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.51 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 98.5 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.48 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 98.47 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.46 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 98.44 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.41 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 98.39 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 98.37 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 98.35 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 98.33 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.3 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.3 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.29 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 98.24 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.22 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 98.21 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 98.08 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.07 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 98.05 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 98.04 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.01 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 97.99 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 97.94 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 97.88 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 97.83 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.8 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 97.76 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 97.68 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 97.64 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 97.62 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 97.55 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 97.53 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 97.51 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 97.44 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 97.44 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 97.41 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 97.4 | |
| PLN02209 | 437 | serine carboxypeptidase | 97.36 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 97.22 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 97.06 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 97.02 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 96.99 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 96.94 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 96.81 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 96.8 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 96.7 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 96.65 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 96.62 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 96.59 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 96.48 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 96.46 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 96.45 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 96.41 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 96.3 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 96.15 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 96.04 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 96.03 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 95.83 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 95.74 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 95.69 | |
| PLN02454 | 414 | triacylglycerol lipase | 95.67 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 95.57 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 95.53 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 95.46 | |
| PLN02571 | 413 | triacylglycerol lipase | 95.19 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 95.07 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 95.02 | |
| PLN02162 | 475 | triacylglycerol lipase | 95.01 | |
| PLN00413 | 479 | triacylglycerol lipase | 94.63 | |
| PLN02408 | 365 | phospholipase A1 | 94.61 | |
| PLN02934 | 515 | triacylglycerol lipase | 94.21 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 94.12 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 94.11 | |
| PLN02310 | 405 | triacylglycerol lipase | 94.03 | |
| PLN02324 | 415 | triacylglycerol lipase | 93.94 | |
| PLN02802 | 509 | triacylglycerol lipase | 93.69 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 93.54 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 93.16 | |
| PLN02753 | 531 | triacylglycerol lipase | 93.14 | |
| PLN02761 | 527 | lipase class 3 family protein | 93.05 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 92.87 | |
| PLN02719 | 518 | triacylglycerol lipase | 92.77 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 92.1 | |
| PLN02847 | 633 | triacylglycerol lipase | 91.71 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 91.47 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 91.35 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 91.18 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 90.69 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 89.95 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 88.24 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 88.16 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 87.17 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 86.67 | |
| PF09949 | 100 | DUF2183: Uncharacterized conserved protein (DUF218 | 86.22 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 85.63 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 83.21 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 82.48 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 82.38 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 82.38 |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=271.67 Aligned_cols=276 Identities=19% Similarity=0.300 Sum_probs=188.1
Q ss_pred ccceEEeecCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-
Q 017180 63 TGNWQWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK- 141 (376)
Q Consensus 63 ~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~- 141 (376)
.+++.+. |.+++|...|++ +++|||+||++ ++...|+.+++.|++ .|+|+++|+||||.|+.+.
T Consensus 10 ~~~~~~~----~~~i~y~~~G~~----~~~vlllHG~~--~~~~~w~~~~~~L~~-----~~~vi~~DlpG~G~S~~~~~ 74 (294)
T PLN02824 10 TRTWRWK----GYNIRYQRAGTS----GPALVLVHGFG--GNADHWRKNTPVLAK-----SHRVYAIDLLGYGYSDKPNP 74 (294)
T ss_pred CceEEEc----CeEEEEEEcCCC----CCeEEEECCCC--CChhHHHHHHHHHHh-----CCeEEEEcCCCCCCCCCCcc
Confidence 4455665 899999998853 67899999999 999999999999998 6899999999999998653
Q ss_pred ------CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCC
Q 017180 142 ------MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRD 215 (376)
Q Consensus 142 ------~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~ 215 (376)
..++++++++++.+++++++ .++++++||||||.+++.+|.++|++|+++|++++...+. .. ....
T Consensus 75 ~~~~~~~~~~~~~~a~~l~~~l~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~-~~-~~~~ 146 (294)
T PLN02824 75 RSAPPNSFYTFETWGEQLNDFCSDVV------GDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGL-HI-KKQP 146 (294)
T ss_pred ccccccccCCHHHHHHHHHHHHHHhc------CCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccc-cc-cccc
Confidence 36899999999999999997 6899999999999999999999999999999999753111 00 0000
Q ss_pred CchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCC
Q 017180 216 SSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDP 295 (376)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (376)
.........+...+.........+... .....++..+. ..+.+.....++..+.+............+..+... ...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 223 (294)
T PLN02824 147 WLGRPFIKAFQNLLRETAVGKAFFKSV-ATPETVKNILC-QCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISY-SGG 223 (294)
T ss_pred hhhhHHHHHHHHHHhchhHHHHHHHhh-cCHHHHHHHHH-HhccChhhccHHHHHHHHhccCCchHHHHHHHHhcc-ccc
Confidence 000111111111111111111111111 11222222222 223223334444444433221111111112222211 111
Q ss_pred CCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 296 VNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 296 ~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
....+.++++ ++|+|+|+|++|.+++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+|+++
T Consensus 224 ----~~~~~~l~~i--~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 224 ----PLPEELLPAV--KCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred ----cchHHHHhhc--CCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 0134567888 99999999999999999999998888888999999998 999999999999999999976
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=275.01 Aligned_cols=283 Identities=18% Similarity=0.309 Sum_probs=189.0
Q ss_pred CCccceEEeecCCce-eEEEEecccCCC-CCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC
Q 017180 61 SKTGNWQWKFKENSI-NIYYEKHERESP-DPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD 138 (376)
Q Consensus 61 ~~~~~~~~~~~~~g~-~l~y~~~g~~~~-~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~ 138 (376)
...+++.|+ |. +++|.+.|++.. ..+|+|||+||++ ++...|.+++..|.+ +|+|+++|+||||.|+
T Consensus 61 ~~~~~~~~~----g~~~i~Y~~~G~g~~~~~gp~lvllHG~~--~~~~~w~~~~~~L~~-----~~~via~Dl~G~G~S~ 129 (360)
T PLN02679 61 ERCKKWKWK----GEYSINYLVKGSPEVTSSGPPVLLVHGFG--ASIPHWRRNIGVLAK-----NYTVYAIDLLGFGASD 129 (360)
T ss_pred ccCceEEEC----CceeEEEEEecCcccCCCCCeEEEECCCC--CCHHHHHHHHHHHhc-----CCEEEEECCCCCCCCC
Confidence 345667776 66 999999987410 0158999999999 999999999999988 8999999999999998
Q ss_pred CCC-CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH-hCCCCcceEEEeccCCCCCCCcccCCCC
Q 017180 139 RPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK-KNLVKPTAIAAVAPTWAGPLPIVFGRDS 216 (376)
Q Consensus 139 ~~~-~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~-~~p~~v~~lvl~~p~~~~~~~~~~~~~~ 216 (376)
.+. ..++.+++++++.+++++++ .++++|+||||||.+++.++. .+|++|+++|++++........... .
T Consensus 130 ~~~~~~~~~~~~a~~l~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~--~ 201 (360)
T PLN02679 130 KPPGFSYTMETWAELILDFLEEVV------QKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVD--D 201 (360)
T ss_pred CCCCccccHHHHHHHHHHHHHHhc------CCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccc--h
Confidence 663 47899999999999999987 688999999999999999887 5799999999998743111000000 0
Q ss_pred chhh----hhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhcc
Q 017180 217 SMET----RYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGL 292 (376)
Q Consensus 217 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (376)
.... ....+......+.....++... .....++..+. ..+.+....+++..+.+............+..+....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (360)
T PLN02679 202 WRIKLLLPLLWLIDFLLKQRGIASALFNRV-KQRDNLKNILL-SVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGP 279 (360)
T ss_pred HHHhhhcchHHHHHHHhhchhhHHHHHHHh-cCHHHHHHHHH-HhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcC
Confidence 0000 0000011111111111111111 11223332222 2333334455555554433322222222223222221
Q ss_pred CCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHH-----HHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHH
Q 017180 293 LDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAE-----MEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQ 366 (376)
Q Consensus 293 ~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~ 366 (376)
.... ..+.++++ ++|||+|+|++|.++|.+. .+.+.+..+++++++++++ |++++|+|+++++.|.+
T Consensus 280 ~~~~-----~~~~l~~i--~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~ 352 (360)
T PLN02679 280 PGPN-----PIKLIPRI--SLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLP 352 (360)
T ss_pred CCCC-----HHHHhhhc--CCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHH
Confidence 1111 34567788 9999999999999998763 3456677899999999999 99999999999999999
Q ss_pred HHHhh
Q 017180 367 FLQQT 371 (376)
Q Consensus 367 fl~~~ 371 (376)
||.+.
T Consensus 353 FL~~~ 357 (360)
T PLN02679 353 WLAQL 357 (360)
T ss_pred HHHhc
Confidence 99875
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-35 Score=257.22 Aligned_cols=269 Identities=16% Similarity=0.170 Sum_probs=180.0
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
+|.+++|...|+ +++|||+||++ ++...|+.+++.|.+ .++||++|+||||.|+.+...++.+++++|
T Consensus 15 ~g~~i~y~~~G~-----g~~vvllHG~~--~~~~~w~~~~~~L~~-----~~~via~D~~G~G~S~~~~~~~~~~~~a~d 82 (295)
T PRK03592 15 LGSRMAYIETGE-----GDPIVFLHGNP--TSSYLWRNIIPHLAG-----LGRCLAPDLIGMGASDKPDIDYTFADHARY 82 (295)
T ss_pred CCEEEEEEEeCC-----CCEEEEECCCC--CCHHHHHHHHHHHhh-----CCEEEEEcCCCCCCCCCCCCCCCHHHHHHH
Confidence 388999999985 67999999999 999999999999998 579999999999999977677999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
+.+++++++ .++++++||||||.+|+.+|.++|++|+++|++++... +. ..... ......... .+..+
T Consensus 83 l~~ll~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~-~~-~~~~~---~~~~~~~~~-~~~~~ 150 (295)
T PRK03592 83 LDAWFDALG------LDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVR-PM-TWDDF---PPAVRELFQ-ALRSP 150 (295)
T ss_pred HHHHHHHhC------CCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCC-Cc-chhhc---chhHHHHHH-HHhCc
Confidence 999999997 68899999999999999999999999999999997321 10 00000 000111111 11111
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCC--C----CcHHHHHHHH
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDP--V----NSREEFLQLF 306 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~ 306 (376)
.....+.. .....+...+. ... ....+++....+......+........+....... . .........+
T Consensus 151 ~~~~~~~~---~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 224 (295)
T PRK03592 151 GEGEEMVL---EENVFIERVLP-GSI--LRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWL 224 (295)
T ss_pred cccccccc---chhhHHhhccc-Ccc--cccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHh
Confidence 11110000 00111121111 111 11344444444443333222222222221111000 0 0011234556
Q ss_pred hcccCCCcEEEEEeCCCCCCCH-HHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 307 ADLEGKLPLLVVSTEGSPRRSK-AEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 307 ~~i~~~~Pvlii~G~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
.++ ++|+|+|+|++|.++++ ...+.+.+..+++++++++++ |++++|+|+++++.|.+|+++...
T Consensus 225 ~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 225 ATS--DVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred ccC--CCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 778 99999999999999944 444444566788999999998 999999999999999999998743
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=260.04 Aligned_cols=279 Identities=20% Similarity=0.264 Sum_probs=187.6
Q ss_pred ccceEEeecCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC
Q 017180 63 TGNWQWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM 142 (376)
Q Consensus 63 ~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~ 142 (376)
...+.|+ |.+++|...|+ +++|||+||++ ++...|..+++.|++ +|+|+++|+||||.|+++..
T Consensus 68 ~~~~~~~----~~~i~Y~~~g~-----g~~vvliHG~~--~~~~~w~~~~~~l~~-----~~~v~~~D~~G~G~S~~~~~ 131 (354)
T PLN02578 68 YNFWTWR----GHKIHYVVQGE-----GLPIVLIHGFG--ASAFHWRYNIPELAK-----KYKVYALDLLGFGWSDKALI 131 (354)
T ss_pred ceEEEEC----CEEEEEEEcCC-----CCeEEEECCCC--CCHHHHHHHHHHHhc-----CCEEEEECCCCCCCCCCccc
Confidence 3456666 88999999885 67899999999 999999999999988 79999999999999998777
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCC------C
Q 017180 143 DYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRD------S 216 (376)
Q Consensus 143 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~------~ 216 (376)
.|+.+.+++++.++++++. .++++++|||+||.+++.+|.++|++|+++|++++......+...... .
T Consensus 132 ~~~~~~~a~~l~~~i~~~~------~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~ 205 (354)
T PLN02578 132 EYDAMVWRDQVADFVKEVV------KEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEET 205 (354)
T ss_pred ccCHHHHHHHHHHHHHHhc------cCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccc
Confidence 8999999999999999986 688999999999999999999999999999999875311110000000 0
Q ss_pred chhh-hhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCC
Q 017180 217 SMET-RYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDP 295 (376)
Q Consensus 217 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (376)
.... ............ .....+... ..+..++. .....+.+....++...+........+.....+...+......
T Consensus 206 ~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (354)
T PLN02578 206 VLTRFVVKPLKEWFQRV-VLGFLFWQA-KQPSRIES-VLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFN 282 (354)
T ss_pred hhhHHHhHHHHHHHHHH-HHHHHHHHh-cCHHHHHH-HHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcC
Confidence 0000 000000000000 000000000 11222222 1222333333444444444433333333322222222211100
Q ss_pred CCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHHHHH
Q 017180 296 VNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 296 ~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~ 369 (376)
. ......+.+.++ ++|+++|+|++|.+++.+..+.+.+..++.++++++.+|++++|+|+++++.|.+|++
T Consensus 283 ~-~~~~~~~~l~~i--~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 283 Q-SRYTLDSLLSKL--SCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNLQAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred C-CCCCHHHHhhcC--CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCccccCHHHHHHHHHHHHh
Confidence 0 001145667888 9999999999999999999999999999999999954499999999999999999986
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-35 Score=254.32 Aligned_cols=259 Identities=14% Similarity=0.131 Sum_probs=174.5
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK 151 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 151 (376)
.+|.+++|...+.++. +++|||+||++ ++...|..+++.|.+ +|+||++|+||||.|+.+...++.+.+++
T Consensus 9 ~~~~~~~~~~~~~~~~--~~plvllHG~~--~~~~~w~~~~~~L~~-----~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~ 79 (276)
T TIGR02240 9 LDGQSIRTAVRPGKEG--LTPLLIFNGIG--ANLELVFPFIEALDP-----DLEVIAFDVPGVGGSSTPRHPYRFPGLAK 79 (276)
T ss_pred cCCcEEEEEEecCCCC--CCcEEEEeCCC--cchHHHHHHHHHhcc-----CceEEEECCCCCCCCCCCCCcCcHHHHHH
Confidence 3488899977532221 47899999999 999999999999988 79999999999999997767789999999
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
++.+++++++ .++++||||||||.+++.+|.++|++|+++|++++....... ... ...... . ..
T Consensus 80 ~~~~~i~~l~------~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~----~~~~~~---~-~~ 143 (276)
T TIGR02240 80 LAARMLDYLD------YGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMV--PGK----PKVLMM---M-AS 143 (276)
T ss_pred HHHHHHHHhC------cCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccC--CCc----hhHHHH---h-cC
Confidence 9999999996 678999999999999999999999999999999985321000 000 000000 0 00
Q ss_pred CchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccC
Q 017180 232 PGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEG 311 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 311 (376)
. ... ...... ..... ..+.......++........................ .... ..+.++++
T Consensus 144 ~--~~~-~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~l~~i-- 206 (276)
T TIGR02240 144 P--RRY-IQPSHG-IHIAP-----DIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAG-LGWT-----SIHWLHKI-- 206 (276)
T ss_pred c--hhh-hccccc-cchhh-----hhccceeeccchhhhhhhhhcccCCCchHHHHHHHH-cCCc-----hhhHhhcC--
Confidence 0 000 000000 00000 000000001111111111111111111111111111 1111 23457788
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhhc
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
++|+|+|+|++|++++++..+++.+..+++++++++++|++++|+|+++++.|.+|+.+..
T Consensus 207 ~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 207 QQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDDGHLFLITRAEAVAPIIMKFLAEER 267 (276)
T ss_pred CCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcCCCchhhccHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999986799999999999999999998764
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=237.80 Aligned_cols=282 Identities=17% Similarity=0.176 Sum_probs=187.1
Q ss_pred CccceEEeecCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC
Q 017180 62 KTGNWQWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK 141 (376)
Q Consensus 62 ~~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~ 141 (376)
..++.+++ |++++|.+.|.++ +|.|+|+||++ .++..|+.++..|+.+ ||+|+|+|+||||.|+.|.
T Consensus 23 ~hk~~~~~----gI~~h~~e~g~~~---gP~illlHGfP--e~wyswr~q~~~la~~----~~rviA~DlrGyG~Sd~P~ 89 (322)
T KOG4178|consen 23 SHKFVTYK----GIRLHYVEGGPGD---GPIVLLLHGFP--ESWYSWRHQIPGLASR----GYRVIAPDLRGYGFSDAPP 89 (322)
T ss_pred ceeeEEEc----cEEEEEEeecCCC---CCEEEEEccCC--ccchhhhhhhhhhhhc----ceEEEecCCCCCCCCCCCC
Confidence 34455555 7999999999876 89999999999 9999999999999997 8999999999999999665
Q ss_pred --CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchh
Q 017180 142 --MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSME 219 (376)
Q Consensus 142 --~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~ 219 (376)
..|++..++.|+..++++++ .++++++||+||+++|..+|..+|++|+++|.++.... .|..-.......
T Consensus 90 ~~~~Yt~~~l~~di~~lld~Lg------~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~--~p~~~~~~~~~~ 161 (322)
T KOG4178|consen 90 HISEYTIDELVGDIVALLDHLG------LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP--NPKLKPLDSSKA 161 (322)
T ss_pred CcceeeHHHHHHHHHHHHHHhc------cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC--Ccccchhhhhcc
Confidence 58999999999999999998 89999999999999999999999999999999986432 111100000000
Q ss_pred hhhH-HHHhhhccCchhhHHhhhhhccHHHHHHHHHhccc----C------CCCCCChHHHHHHHHHHhccCCCchhHHH
Q 017180 220 TRYG-LLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVY----S------NPDNVTPGIVESRYALTKRKGARYVPAAF 288 (376)
Q Consensus 220 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (376)
.... +.--.+..+......+... ..+.....+..+... . .+...+++.++.+.......+ ......+
T Consensus 162 ~f~~~~y~~~fQ~~~~~E~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g-~~gplNy 239 (322)
T KOG4178|consen 162 IFGKSYYICLFQEPGKPETELSKD-DTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDG-FTGPLNY 239 (322)
T ss_pred ccCccceeEeccccCcchhhhccc-hhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhcccccc-ccccchh
Confidence 0000 0000111222222211111 001111111111111 0 011244555555554443222 2222222
Q ss_pred hhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHH-HHHHHhcccCCc-eEEEeCCC-CCCCCCChHHHHHHHH
Q 017180 289 LTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKA-EMEALKGAKGVT-KFVEVPGA-LLPQEEYPAMVAQELY 365 (376)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~-~~~~~~~~-H~~~~e~pe~~~~~i~ 365 (376)
...+.. ..+...-.+.++ ++|+++|+|+.|.+.+.. ..+.+++..++. +.++++++ |+++.|+|++++++|.
T Consensus 240 yrn~~r---~w~a~~~~~~~i--~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~ 314 (322)
T KOG4178|consen 240 YRNFRR---NWEAAPWALAKI--TIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAIL 314 (322)
T ss_pred hHHHhh---Cchhcccccccc--ccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHH
Confidence 111111 000123345667 999999999999988765 455556666665 67888998 9999999999999999
Q ss_pred HHHHhh
Q 017180 366 QFLQQT 371 (376)
Q Consensus 366 ~fl~~~ 371 (376)
+|+++.
T Consensus 315 ~f~~~~ 320 (322)
T KOG4178|consen 315 GFINSF 320 (322)
T ss_pred HHHHhh
Confidence 999875
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=246.63 Aligned_cols=257 Identities=12% Similarity=0.138 Sum_probs=169.2
Q ss_pred eeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHHHH
Q 017180 75 INIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKF 152 (376)
Q Consensus 75 ~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~~~ 152 (376)
.+++|.+.|+++ +++|||+||++ ++...|..+++.|.+. ||+|+++|+||||.|+.+. ..++.++++++
T Consensus 34 ~~i~y~~~G~~~---~~~lvliHG~~--~~~~~w~~~~~~L~~~----gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~ 104 (302)
T PRK00870 34 LRMHYVDEGPAD---GPPVLLLHGEP--SWSYLYRKMIPILAAA----GHRVIAPDLIGFGRSDKPTRREDYTYARHVEW 104 (302)
T ss_pred EEEEEEecCCCC---CCEEEEECCCC--CchhhHHHHHHHHHhC----CCEEEEECCCCCCCCCCCCCcccCCHHHHHHH
Confidence 689999998754 68999999999 9999999999999864 8999999999999998654 46899999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
+.+++++++ .++++++||||||.+++.+|.++|++|+++|++++........ .......+.......+
T Consensus 105 l~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 172 (302)
T PRK00870 105 MRSWFEQLD------LTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGP------MPDAFWAWRAFSQYSP 172 (302)
T ss_pred HHHHHHHcC------CCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCcccc------chHHHhhhhcccccCc
Confidence 999999987 6789999999999999999999999999999998742110000 0000000000000000
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCc---hhHHHhhcc-CCCC-CcHHHHHHHHh
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARY---VPAAFLTGL-LDPV-NSREEFLQLFA 307 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~-~~~~~~~~~~~ 307 (376)
. ..+...+... . .....++....+........... ......... .... .........+.
T Consensus 173 ~-------------~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 236 (302)
T PRK00870 173 V-------------LPVGRLVNGG-T--VRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLE 236 (302)
T ss_pred h-------------hhHHHHhhcc-c--cccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhh
Confidence 0 0000000000 0 00122222222111000000000 000000000 0000 01111234567
Q ss_pred cccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCce---EEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 308 DLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTK---FVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 308 ~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
++ ++|+++|+|++|.+++.+. +.+.+..++++ +++++++ |++++|+|+++++.|.+||++.
T Consensus 237 ~i--~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 237 RW--DKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred cC--CCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 88 9999999999999999766 77888888766 8899998 9999999999999999999764
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=243.18 Aligned_cols=260 Identities=15% Similarity=0.190 Sum_probs=166.7
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKF 152 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~~~~ 152 (376)
|.+++|...|. +++|||+||++ .+...|+.+++.|.+ +|+|+++|+||||.|+.+. ..++.++++++
T Consensus 23 ~~~i~y~~~G~-----~~~iv~lHG~~--~~~~~~~~~~~~l~~-----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 90 (286)
T PRK03204 23 RGRIHYIDEGT-----GPPILLCHGNP--TWSFLYRDIIVALRD-----RFRCVAPDYLGFGLSERPSGFGYQIDEHARV 90 (286)
T ss_pred CcEEEEEECCC-----CCEEEEECCCC--ccHHHHHHHHHHHhC-----CcEEEEECCCCCCCCCCCCccccCHHHHHHH
Confidence 78999999885 67899999999 999999999999988 8999999999999999654 46889999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
+.+++++++ .++++++||||||.+++.++..+|++|+++|++++... +. .. .. ...........
T Consensus 91 ~~~~~~~~~------~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~---~~----~~-~~--~~~~~~~~~~~ 154 (286)
T PRK03204 91 IGEFVDHLG------LDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFW---PA----DT-LA--MKAFSRVMSSP 154 (286)
T ss_pred HHHHHHHhC------CCCEEEEEECccHHHHHHHHHhChhheeEEEEECcccc---CC----Cc-hh--HHHHHHHhccc
Confidence 999999987 67899999999999999999999999999999876421 00 00 00 00000011000
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCC
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGK 312 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 312 (376)
.....+.. ........+..... ...+++....+......+......................+...+.+..++
T Consensus 155 ~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T PRK03204 155 PVQYAILR----RNFFVERLIPAGTE---HRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGT 227 (286)
T ss_pred cchhhhhh----hhHHHHHhcccccc---CCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCC
Confidence 00000000 00111111111100 122233222222111111111111110000000000001111112111117
Q ss_pred CcEEEEEeCCCCCCCH-HHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHH
Q 017180 313 LPLLVVSTEGSPRRSK-AEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFL 368 (376)
Q Consensus 313 ~Pvlii~G~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl 368 (376)
+||++|+|++|.++++ ...+.+.+..++.++++++++ |++++|+|+++++.|.+||
T Consensus 228 ~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 228 KPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred CCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 8999999999998754 467888899999999999999 9999999999999999997
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-32 Score=241.97 Aligned_cols=267 Identities=16% Similarity=0.188 Sum_probs=178.0
Q ss_pred EeecCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC----C
Q 017180 68 WKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM----D 143 (376)
Q Consensus 68 ~~~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~----~ 143 (376)
.....+|++++|.+.|+++ +++|||+||++ .+...|+.+++.|++ +|+||++|+||||.|+.+.. .
T Consensus 108 ~~~~~~~~~~~y~~~G~~~---~~~ivllHG~~--~~~~~w~~~~~~L~~-----~~~Via~DlpG~G~S~~p~~~~~~~ 177 (383)
T PLN03084 108 SQASSDLFRWFCVESGSNN---NPPVLLIHGFP--SQAYSYRKVLPVLSK-----NYHAIAFDWLGFGFSDKPQPGYGFN 177 (383)
T ss_pred eEEcCCceEEEEEecCCCC---CCeEEEECCCC--CCHHHHHHHHHHHhc-----CCEEEEECCCCCCCCCCCccccccc
Confidence 3456779999999999754 68999999999 999999999999988 89999999999999996642 6
Q ss_pred CCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhH
Q 017180 144 YNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYG 223 (376)
Q Consensus 144 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~ 223 (376)
++.+++++++.+++++++ .++++|+|||+||.+++.+|.++|++|+++|+++|...... . . ......
T Consensus 178 ys~~~~a~~l~~~i~~l~------~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~----~--~-~p~~l~ 244 (383)
T PLN03084 178 YTLDEYVSSLESLIDELK------SDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEH----A--K-LPSTLS 244 (383)
T ss_pred CCHHHHHHHHHHHHHHhC------CCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCcccc----c--c-chHHHH
Confidence 899999999999999997 67899999999999999999999999999999998531100 0 0 000000
Q ss_pred HHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCc-hhHHHhhccCCCC-CcHHH
Q 017180 224 LLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARY-VPAAFLTGLLDPV-NSREE 301 (376)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~ 301 (376)
.+... ..... +... ........+.. ......+++....+.......+... ....+........ ...++
T Consensus 245 ~~~~~----l~~~~-~~~~--~~~~~~~~~~~---~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~ 314 (383)
T PLN03084 245 EFSNF----LLGEI-FSQD--PLRASDKALTS---CGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEE 314 (383)
T ss_pred HHHHH----Hhhhh-hhcc--hHHHHhhhhcc---cCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHH
Confidence 00000 00000 0000 00000001110 1112233343333333322222111 1111111111100 01111
Q ss_pred HHHHH--hcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 302 FLQLF--ADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 302 ~~~~~--~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+...+ .++ ++|+++|+|++|.+++.+..+.+.+. ++.++++++++ |++++|+|+++++.|.+||.+
T Consensus 315 l~~~l~~~~i--~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 315 MRSILTDKNW--KTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred HHhhhccccC--CCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 22222 356 89999999999999999988888776 48899999998 999999999999999999864
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-32 Score=235.71 Aligned_cols=263 Identities=14% Similarity=0.162 Sum_probs=173.4
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC-CCCHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM-DYNADVMEK 151 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~-~~~~~~~~~ 151 (376)
+|.+++|.+.|+.. +++|||+||++ ++...|+.+++.|++ +|+|+++|+||||.|+.+.. .++.+.+++
T Consensus 14 ~~~~~~~~~~g~~~---~~~vv~~hG~~--~~~~~~~~~~~~l~~-----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 83 (278)
T TIGR03056 14 GPFHWHVQDMGPTA---GPLLLLLHGTG--ASTHSWRDLMPPLAR-----SFRVVAPDLPGHGFTRAPFRFRFTLPSMAE 83 (278)
T ss_pred CCEEEEEEecCCCC---CCeEEEEcCCC--CCHHHHHHHHHHHhh-----CcEEEeecCCCCCCCCCccccCCCHHHHHH
Confidence 38899999988754 68999999999 999999999999988 89999999999999986544 789999999
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
++.+++++++ .++++|+||||||.+++.+|.++|++++++|++++.... ........ .. .........
T Consensus 84 ~l~~~i~~~~------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~-~~~~~~~~--~~---~~~~~~~~~ 151 (278)
T TIGR03056 84 DLSALCAAEG------LSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMP-FEGMAGTL--FP---YMARVLACN 151 (278)
T ss_pred HHHHHHHHcC------CCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccc-cccccccc--cc---hhhHhhhhc
Confidence 9999999986 678999999999999999999999999999999874311 11000000 00 000000001
Q ss_pred CchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccC
Q 017180 232 PGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEG 311 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 311 (376)
+.......... .....+....... ....++.....+.................... ........++++
T Consensus 152 ~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i-- 219 (278)
T TIGR03056 152 PFTPPMMSRGA-ADQQRVERLIRDT----GSLLDKAGMTYYGRLIRSPAHVDGALSMMAQW-----DLAPLNRDLPRI-- 219 (278)
T ss_pred ccchHHHHhhc-ccCcchhHHhhcc----ccccccchhhHHHHhhcCchhhhHHHHHhhcc-----cccchhhhcccC--
Confidence 11111000000 0001111111100 00111111111111111110000011111100 001133456778
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
++|+++|+|++|..++.+..+.+.+..++++++.++++ |++++|.|+++++.|.+|++
T Consensus 220 ~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 220 TIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred CCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 99999999999999999999999988999999999998 99999999999999999984
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-31 Score=234.17 Aligned_cols=258 Identities=16% Similarity=0.154 Sum_probs=165.3
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHH---HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCC-CCHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRL---VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMD-YNADVM 149 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~---~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~-~~~~~~ 149 (376)
|.+++|...|+ +++|||+||++ .+...|.. .+..+.+. +|+|+++|+||||+|+.+..+ .....+
T Consensus 19 ~~~~~y~~~g~-----~~~ivllHG~~--~~~~~~~~~~~~~~~l~~~----~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 87 (282)
T TIGR03343 19 NFRIHYNEAGN-----GEAVIMLHGGG--PGAGGWSNYYRNIGPFVDA----GYRVILKDSPGFNKSDAVVMDEQRGLVN 87 (282)
T ss_pred ceeEEEEecCC-----CCeEEEECCCC--CchhhHHHHHHHHHHHHhC----CCEEEEECCCCCCCCCCCcCcccccchh
Confidence 57799998875 67899999999 87777754 34455543 899999999999999854321 122256
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhh
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (376)
++++.++++.++ .++++++||||||.+++.+|.++|++++++|+++|..... ..... ......... ....
T Consensus 88 ~~~l~~~l~~l~------~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~--~~~~~-~~~~~~~~~-~~~~ 157 (282)
T TIGR03343 88 ARAVKGLMDALD------IEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGP--SLFAP-MPMEGIKLL-FKLY 157 (282)
T ss_pred HHHHHHHHHHcC------CCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCc--ccccc-CchHHHHHH-HHHh
Confidence 889999999997 7889999999999999999999999999999998743111 00000 000000000 0000
Q ss_pred ccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcc
Q 017180 230 RAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADL 309 (376)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 309 (376)
..+. ......... ....+....+++..+......... ......+...............+.++++
T Consensus 158 ~~~~------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~i 222 (282)
T TIGR03343 158 AEPS------------YETLKQMLN-VFLFDQSLITEELLQGRWENIQRQ--PEHLKNFLISSQKAPLSTWDVTARLGEI 222 (282)
T ss_pred cCCC------------HHHHHHHHh-hCccCcccCcHHHHHhHHHHhhcC--HHHHHHHHHhccccccccchHHHHHhhC
Confidence 0000 111111111 111112223333322211111100 0001111110000000111245567888
Q ss_pred cCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 310 EGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 310 ~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
++|+|+|+|++|.+++++..+++.+..+++++++++++ |+++.|+|+++++.|.+||+
T Consensus 223 --~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 223 --KAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred --CCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999998 99999999999999999996
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-32 Score=234.05 Aligned_cols=250 Identities=13% Similarity=0.123 Sum_probs=160.0
Q ss_pred eEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHH
Q 017180 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVD 155 (376)
Q Consensus 76 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~ 155 (376)
.++|...|.+ .++||||||++ ++...|+.+++.|.+ +|+|+++|+||||.|+.+. .++.+++++++.+
T Consensus 3 ~~~y~~~G~g----~~~ivllHG~~--~~~~~w~~~~~~L~~-----~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l~~ 70 (256)
T PRK10349 3 NIWWQTKGQG----NVHLVLLHGWG--LNAEVWRCIDEELSS-----HFTLHLVDLPGFGRSRGFG-ALSLADMAEAVLQ 70 (256)
T ss_pred ccchhhcCCC----CCeEEEECCCC--CChhHHHHHHHHHhc-----CCEEEEecCCCCCCCCCCC-CCCHHHHHHHHHh
Confidence 4678888863 34699999999 999999999999998 7999999999999998553 5777777666553
Q ss_pred HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchh
Q 017180 156 LINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVG 235 (376)
Q Consensus 156 ~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (376)
+. .++++++||||||.+++.+|.++|++|+++|++++........ ...... .........
T Consensus 71 ----~~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~--~~~~~~---~~~~~~~~~----- 130 (256)
T PRK10349 71 ----QA------PDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARD--EWPGIK---PDVLAGFQQ----- 130 (256)
T ss_pred ----cC------CCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCC--CCCccc---HHHHHHHHH-----
Confidence 33 5789999999999999999999999999999998742110000 000000 000000000
Q ss_pred hHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhc-cCCCc-hhHHHhhccCCCCCcHHHHHHHHhcccCCC
Q 017180 236 WMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKR-KGARY-VPAAFLTGLLDPVNSREEFLQLFADLEGKL 313 (376)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 313 (376)
.+... ....+..++....+. ......+.. ........ ..... ............ ++.+.+.++ ++
T Consensus 131 -~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~i--~~ 197 (256)
T PRK10349 131 -QLSDD---FQRTVERFLALQTMG-TETARQDAR-ALKKTVLALPMPEVDVLNGGLEILKTV-----DLRQPLQNV--SM 197 (256)
T ss_pred -HHHhc---hHHHHHHHHHHHHcc-CchHHHHHH-HHHHHhhccCCCcHHHHHHHHHHHHhC-----ccHHHHhhc--CC
Confidence 00000 011111111111110 011111111 11111111 10000 000000100011 145567788 99
Q ss_pred cEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 314 PLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 314 Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
|||+|+|++|.+++.+..+.+.+.++++++++++++ |++++|+|++|++.|.+|-++
T Consensus 198 P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 198 PFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred CeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999 999999999999999999654
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=235.85 Aligned_cols=246 Identities=12% Similarity=0.037 Sum_probs=159.7
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
.+|||+||++ .+...|+.+++.|.+. +|+|+++|+||||.|+.+. ..++.+++++|+.+++++++ ..+
T Consensus 4 ~~vvllHG~~--~~~~~w~~~~~~L~~~----~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~-----~~~ 72 (255)
T PLN02965 4 IHFVFVHGAS--HGAWCWYKLATLLDAA----GFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLP-----PDH 72 (255)
T ss_pred eEEEEECCCC--CCcCcHHHHHHHHhhC----CceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcC-----CCC
Confidence 4599999999 9999999999999654 8999999999999998543 46899999999999999986 235
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhcc--HH
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSN--EK 247 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 247 (376)
+++++||||||.+++.+|.++|++|+++|++++.... +.. ............... ............. ..
T Consensus 73 ~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~--~~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 144 (255)
T PLN02965 73 KVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVK--PGS----IISPRLKNVMEGTEK--IWDYTFGEGPDKPPTGI 144 (255)
T ss_pred CEEEEecCcchHHHHHHHHhCchheeEEEEEccccCC--CCC----CccHHHHhhhhcccc--ceeeeeccCCCCCcchh
Confidence 8999999999999999999999999999999874210 000 000000000000000 0000000000000 00
Q ss_pred HHHH-HHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCC
Q 017180 248 AIQS-QYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRR 326 (376)
Q Consensus 248 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~ 326 (376)
.++. ......+. . ...+......... .+....... ...++...+.++ ++|+++|+|++|.++
T Consensus 145 ~~~~~~~~~~~~~-~--~~~~~~~~~~~~~-~~~~~~~~~-----------~~~~~~~~~~~i--~vP~lvi~g~~D~~~ 207 (255)
T PLN02965 145 MMKPEFVRHYYYN-Q--SPLEDYTLSSKLL-RPAPVRAFQ-----------DLDKLPPNPEAE--KVPRVYIKTAKDNLF 207 (255)
T ss_pred hcCHHHHHHHHhc-C--CCHHHHHHHHHhc-CCCCCcchh-----------hhhhccchhhcC--CCCEEEEEcCCCCCC
Confidence 0000 00000111 0 1111111111111 111000000 000122234567 999999999999999
Q ss_pred CHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 327 SKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
+++..+.+.+..+++++++++++ |++++|+|++|++.|.+|++++.
T Consensus 208 ~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 208 DPVRQDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred CHHHHHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHHHHHHhc
Confidence 99999999999999999999998 99999999999999999998764
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-31 Score=239.45 Aligned_cols=276 Identities=13% Similarity=0.146 Sum_probs=170.4
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHH-HHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHH
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRL-VAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADV 148 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~-~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~ 148 (376)
..+|.+++|...|+.....+++|||+||++ ++...|.. ++..|.+.. +.+|+|+++|+||||.|+.+. ..++.++
T Consensus 182 ~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~--~s~~~W~~~~~~~L~~~~-~~~yrVia~Dl~G~G~S~~p~~~~ytl~~ 258 (481)
T PLN03087 182 SSSNESLFVHVQQPKDNKAKEDVLFIHGFI--SSSAFWTETLFPNFSDAA-KSTYRLFAVDLLGFGRSPKPADSLYTLRE 258 (481)
T ss_pred eeCCeEEEEEEecCCCCCCCCeEEEECCCC--ccHHHHHHHHHHHHHHHh-hCCCEEEEECCCCCCCCcCCCCCcCCHHH
Confidence 345689999999976533357999999999 99999985 446665310 018999999999999999653 5689999
Q ss_pred HHHHHH-HHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHh
Q 017180 149 MEKFVV-DLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRG 227 (376)
Q Consensus 149 ~~~~l~-~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (376)
+++++. .++++++ .++++++||||||.+++.+|.++|++|+++|+++|.... .+. .. .........
T Consensus 259 ~a~~l~~~ll~~lg------~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~-~~~-----~~-~~~~~~~~~ 325 (481)
T PLN03087 259 HLEMIERSVLERYK------VKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYP-VPK-----GV-QATQYVMRK 325 (481)
T ss_pred HHHHHHHHHHHHcC------CCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccc-ccc-----ch-hHHHHHHHH
Confidence 999995 8899987 788999999999999999999999999999999874311 110 00 000000000
Q ss_pred hhccCc-----hhhHH---hhhhhc--------cHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhc
Q 017180 228 TLRAPG-----VGWMM---YNMLVS--------NEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTG 291 (376)
Q Consensus 228 ~~~~~~-----~~~~~---~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (376)
...... ..... +..... ...... .+... .. .........+.+..... .........+...
T Consensus 326 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~l-~~-~~~~~~~l~~~~~~~~~-~~~~~~l~~~i~~ 401 (481)
T PLN03087 326 VAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWE-FLTRL-LT-RNRMRTFLIEGFFCHTH-NAAWHTLHNIICG 401 (481)
T ss_pred hcccccCCccccchhHHHHHHHHHhhhhcccccchHHHH-HHHHH-hh-hhhhhHHHHHHHHhccc-hhhHHHHHHHHhc
Confidence 000000 00000 000000 000000 00000 00 00000001100000000 0000000111111
Q ss_pred cCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCC-CChHHHHHHHHHHHH
Q 017180 292 LLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQE-EYPAMVAQELYQFLQ 369 (376)
Q Consensus 292 ~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~-e~pe~~~~~i~~fl~ 369 (376)
.... ..+.+....++| ++|+|+|+|++|.++|.+..+.+++.+|++++++++++ |++++ |+|+++++.|.+|..
T Consensus 402 ~~~~--l~~~l~~l~~~I--~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~ 477 (481)
T PLN03087 402 SGSK--LDGYLDHVRDQL--KCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWR 477 (481)
T ss_pred hhhh--hhhHHHHHHHhC--CCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhh
Confidence 0000 011133344568 99999999999999999999999999999999999999 99885 999999999999986
Q ss_pred h
Q 017180 370 Q 370 (376)
Q Consensus 370 ~ 370 (376)
.
T Consensus 478 ~ 478 (481)
T PLN03087 478 R 478 (481)
T ss_pred c
Confidence 5
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.1e-31 Score=227.31 Aligned_cols=252 Identities=13% Similarity=0.146 Sum_probs=163.0
Q ss_pred eEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHH
Q 017180 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVD 155 (376)
Q Consensus 76 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~ 155 (376)
+++|...+...+..+|+|||+||++ ++...|..++..|.+ +|+|+++|+||||.|+.+ ..++.+++++|+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~--~~~~~~~~~~~~l~~-----~~~vi~~D~~G~G~s~~~-~~~~~~~~~~d~~~ 73 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLF--GSLDNLGVLARDLVN-----DHDIIQVDMRNHGLSPRD-PVMNYPAMAQDLLD 73 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCC--CchhHHHHHHHHHhh-----CCeEEEECCCCCCCCCCC-CCCCHHHHHHHHHH
Confidence 3455554333222278999999999 999999999999988 899999999999999865 45899999999999
Q ss_pred HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchh
Q 017180 156 LINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVG 235 (376)
Q Consensus 156 ~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (376)
++++++ .++++|+||||||.+++.+|.++|++|+++|++++...... .. ........+.......
T Consensus 74 ~l~~l~------~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~-----~~-~~~~~~~~~~~~~~~~--- 138 (255)
T PRK10673 74 TLDALQ------IEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYH-----VR-RHDEIFAAINAVSEAG--- 138 (255)
T ss_pred HHHHcC------CCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCcc-----ch-hhHHHHHHHHHhhhcc---
Confidence 999986 67899999999999999999999999999999975321100 00 0000000000000000
Q ss_pred hHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcE
Q 017180 236 WMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPL 315 (376)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pv 315 (376)
. .........+... . ............................... ....+.++++ ++|+
T Consensus 139 ------~-~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~P~ 198 (255)
T PRK10673 139 ------A-TTRQQAAAIMRQH-L-----NEEGVIQFLLKSFVDGEWRFNVPVLWDQYPH-----IVGWEKIPAW--PHPA 198 (255)
T ss_pred ------c-ccHHHHHHHHHHh-c-----CCHHHHHHHHhcCCcceeEeeHHHHHHhHHH-----HhCCcccCCC--CCCe
Confidence 0 0000000000000 0 0001111110000000000000000000000 0001234566 8999
Q ss_pred EEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 316 LVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 316 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
|+|+|++|..++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+||.+
T Consensus 199 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 199 LFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred EEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999 999999999999999999975
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.8e-31 Score=237.07 Aligned_cols=271 Identities=17% Similarity=0.115 Sum_probs=164.2
Q ss_pred CceeEEEEecccCCC----CCCCcEEEecCCCCCccchHhH--HHHHHH--------HhhhCCcceEEEEeCCCCCcCCC
Q 017180 73 NSINIYYEKHERESP----DPSKNILMIPTISDVSTVEEWR--LVAQDI--------VQRVGKVNWRATIVDWPGLGYSD 138 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~----~~~~~vvllHG~~~~~~~~~~~--~~~~~L--------~~~~~~~~~~Vi~~D~~G~G~S~ 138 (376)
+|.+++|...|++.. +.+|+|||+||++ ++...|. .+...| .+ +|+||++|+||||.|+
T Consensus 48 ~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~--~~~~~~~~~~~~~~l~~~~~~l~~~-----~~~Via~Dl~GhG~S~ 120 (360)
T PRK06489 48 PELRLHYTTLGTPHRNADGEIDNAVLVLHGTG--GSGKSFLSPTFAGELFGPGQPLDAS-----KYFIILPDGIGHGKSS 120 (360)
T ss_pred CCceEEEEecCCCCcccccCCCCeEEEeCCCC--CchhhhccchhHHHhcCCCCccccc-----CCEEEEeCCCCCCCCC
Confidence 488999999986421 1147899999999 8887775 454444 44 7999999999999998
Q ss_pred CCCC-------CCCHHHHHHHHHHHH-hCCCCCCCCCCCcEE-EEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCC
Q 017180 139 RPKM-------DYNADVMEKFVVDLI-NAPDSPVSSSESDLV-IFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLP 209 (376)
Q Consensus 139 ~~~~-------~~~~~~~~~~l~~~l-~~l~~~~~~~~~~~~-lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~ 209 (376)
.+.. .++++++++++.+++ ++++ .++++ |+||||||.+|+.+|.++|++|+++|++++..... .
T Consensus 121 ~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lg------i~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~-~ 193 (360)
T PRK06489 121 KPSDGLRAAFPRYDYDDMVEAQYRLVTEGLG------VKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEM-S 193 (360)
T ss_pred CCCcCCCCCCCcccHHHHHHHHHHHHHHhcC------CCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccc-c
Confidence 6542 488999999888754 7786 56775 89999999999999999999999999998642100 0
Q ss_pred cccCCCCchhhhhHHHHhhhccCchhhHHhhhh-hccHHHHHH--HHHhc---ccCCCCCCCh----HHHHHHHHHHhcc
Q 017180 210 IVFGRDSSMETRYGLLRGTLRAPGVGWMMYNML-VSNEKAIQS--QYKSH---VYSNPDNVTP----GIVESRYALTKRK 279 (376)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~ 279 (376)
.. ......................+... ......... ..... .+.. ..... ...+.........
T Consensus 194 ---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 267 (360)
T PRK06489 194 ---GR--NWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQA-QAPTRAAADKLVDERLAAPVTA 267 (360)
T ss_pred ---HH--HHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHH-hcCChHHHHHHHHHHHHhhhhc
Confidence 00 00000000000000000000000000 000000000 00000 0000 00111 1111111111111
Q ss_pred CCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHH--HHHhcccCCceEEEeCC-----CCCC
Q 017180 280 GARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEM--EALKGAKGVTKFVEVPG-----ALLP 352 (376)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~--~~~~~~~~~~~~~~~~~-----~H~~ 352 (376)
....+........... ..+.+++| ++|||+|+|++|.+++.+.. +.+.+.+|+++++++++ ||++
T Consensus 268 -~~~~~~~~~~~~~~~d-----~~~~L~~I--~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~ 339 (360)
T PRK06489 268 -DANDFLYQWDSSRDYN-----PSPDLEKI--KAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGT 339 (360)
T ss_pred -CHHHHHHHHHHhhccC-----hHHHHHhC--CCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCccc
Confidence 1111111111111111 45678888 99999999999999998865 77888999999999998 4999
Q ss_pred CCCChHHHHHHHHHHHHhhc
Q 017180 353 QEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 353 ~~e~pe~~~~~i~~fl~~~~ 372 (376)
+ |+|++|++.|.+||+++.
T Consensus 340 ~-e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 340 T-GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred c-cCHHHHHHHHHHHHHhcc
Confidence 7 899999999999998764
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.5e-31 Score=236.79 Aligned_cols=268 Identities=15% Similarity=0.129 Sum_probs=169.6
Q ss_pred ecCCceeEEEEecccCCCCCCCcEEEecCCCCCccch-HhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHH
Q 017180 70 FKENSINIYYEKHERESPDPSKNILMIPTISDVSTVE-EWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNAD 147 (376)
Q Consensus 70 ~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~-~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~ 147 (376)
...+|.+|+|..+++.+.+++++|||+||++ .+.. .|..++..|++. ||+|+++|+||||.|+.+. ...+.+
T Consensus 67 ~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~--~~~~~~~~~~~~~l~~~----g~~v~~~D~~G~G~S~~~~~~~~~~~ 140 (349)
T PLN02385 67 VNSRGVEIFSKSWLPENSRPKAAVCFCHGYG--DTCTFFFEGIARKIASS----GYGVFAMDYPGFGLSEGLHGYIPSFD 140 (349)
T ss_pred EcCCCCEEEEEEEecCCCCCCeEEEEECCCC--CccchHHHHHHHHHHhC----CCEEEEecCCCCCCCCCCCCCcCCHH
Confidence 3456999999998865433467899999999 7765 468889999876 8999999999999998653 245889
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHh
Q 017180 148 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRG 227 (376)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (376)
++++|+.++++.+.........+++|+||||||.+++.++.++|++++++|+++|....... .... .........+..
T Consensus 141 ~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~-~~~~-~~~~~~~~~~~~ 218 (349)
T PLN02385 141 DLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADD-VVPP-PLVLQILILLAN 218 (349)
T ss_pred HHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccccccc-ccCc-hHHHHHHHHHHH
Confidence 99999999987764211112347999999999999999999999999999999984311000 0000 000000000000
Q ss_pred hhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHH--Hhc--cCCCchhHHHhhccCCCCCcHHHHH
Q 017180 228 TLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYAL--TKR--KGARYVPAAFLTGLLDPVNSREEFL 303 (376)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (376)
.. +.. .. .....+... .+........... ... ..........+. ....+.
T Consensus 219 ~~--p~~-----~~-----------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~~~~~~ 272 (349)
T PLN02385 219 LL--PKA-----KL-----------VPQKDLAEL-AFRDLKKRKMAEYNVIAYKDKPRLRTAVELLR-------TTQEIE 272 (349)
T ss_pred HC--CCc-----ee-----------cCCCccccc-cccCHHHHHHhhcCcceeCCCcchHHHHHHHH-------HHHHHH
Confidence 00 000 00 000000000 0000000000000 000 000000011110 111245
Q ss_pred HHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc--CCceEEEeCCC-CCCCCCChHH----HHHHHHHHHHhhcC
Q 017180 304 QLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK--GVTKFVEVPGA-LLPQEEYPAM----VAQELYQFLQQTFE 373 (376)
Q Consensus 304 ~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~-H~~~~e~pe~----~~~~i~~fl~~~~~ 373 (376)
..+.++ ++|+|+|+|++|.+++.+..+.+.+.. +++++++++++ |++++|+|++ +.+.|.+||.+...
T Consensus 273 ~~l~~i--~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 273 MQLEEV--SLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HhcccC--CCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 567788 999999999999999999998887654 57899999999 9999999987 88889999998753
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=223.44 Aligned_cols=249 Identities=15% Similarity=0.247 Sum_probs=169.0
Q ss_pred EEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHH
Q 017180 77 IYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDL 156 (376)
Q Consensus 77 l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~ 156 (376)
++|...|+.+. +|+|||+||++ .+...|..+++.|.+ +|+|+++|+||||.|+.+...++.+++++++.++
T Consensus 2 ~~~~~~g~~~~--~~~li~~hg~~--~~~~~~~~~~~~l~~-----~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~ 72 (251)
T TIGR02427 2 LHYRLDGAADG--APVLVFINSLG--TDLRMWDPVLPALTP-----DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLAL 72 (251)
T ss_pred ceEEeecCCCC--CCeEEEEcCcc--cchhhHHHHHHHhhc-----ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 56777776522 67899999999 999999999999987 8999999999999998766788999999999999
Q ss_pred HhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhh
Q 017180 157 INAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGW 236 (376)
Q Consensus 157 l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (376)
++.++ .++++++||||||.+++.+|.++|++++++|++++......+ ............. .
T Consensus 73 i~~~~------~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~---------~~~~~~~~~~~~~-~--- 133 (251)
T TIGR02427 73 LDHLG------IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTP---------ESWNARIAAVRAE-G--- 133 (251)
T ss_pred HHHhC------CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCch---------hhHHHHHhhhhhc-c---
Confidence 99986 678999999999999999999999999999999864211000 0000000000000 0
Q ss_pred HHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEE
Q 017180 237 MMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLL 316 (376)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvl 316 (376)
..... ...+..++... +. .......+.+......... ..+.......... ...+.++++ ++|++
T Consensus 134 -~~~~~---~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~--~~Pvl 197 (251)
T TIGR02427 134 -LAALA---DAVLERWFTPG-FR---EAHPARLDLYRNMLVRQPP-DGYAGCCAAIRDA-----DFRDRLGAI--AVPTL 197 (251)
T ss_pred -HHHHH---HHHHHHHcccc-cc---cCChHHHHHHHHHHHhcCH-HHHHHHHHHHhcc-----cHHHHhhhc--CCCeE
Confidence 00000 11111111111 10 1111122222221111110 1111111111111 144567778 99999
Q ss_pred EEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 317 VVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 317 ii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
+++|++|.+++.+..+.+.+..++.++++++++ |++++++|+++.+.|.+|++
T Consensus 198 ii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 198 CIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred EEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 999999999999998988888899999999988 99999999999999999974
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-30 Score=222.69 Aligned_cols=254 Identities=12% Similarity=0.118 Sum_probs=164.0
Q ss_pred EEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHHHHHHHH
Q 017180 78 YYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKFVVDL 156 (376)
Q Consensus 78 ~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~~l~~~ 156 (376)
+|...|+.++ .+|+|||+||++ ++...|..++..|.+ +|+|+++|+||||.|+.+ ...++.+++++++.++
T Consensus 2 ~~~~~~~~~~-~~~~iv~lhG~~--~~~~~~~~~~~~l~~-----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 73 (257)
T TIGR03611 2 HYELHGPPDA-DAPVVVLSSGLG--GSGSYWAPQLDVLTQ-----RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQL 73 (257)
T ss_pred EEEEecCCCC-CCCEEEEEcCCC--cchhHHHHHHHHHHh-----ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHH
Confidence 5677775322 267899999999 999999999999987 899999999999999843 4578999999999999
Q ss_pred HhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhh
Q 017180 157 INAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGW 236 (376)
Q Consensus 157 l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (376)
+++++ .++++++||||||.+++.+|.++|++++++|++++..... +. ...................
T Consensus 74 i~~~~------~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~ 139 (257)
T TIGR03611 74 LDALN------IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPD-PH-------TRRCFDVRIALLQHAGPEA 139 (257)
T ss_pred HHHhC------CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCC-hh-------HHHHHHHHHHHHhccCcch
Confidence 99986 6789999999999999999999999999999998632110 00 0000000000000000000
Q ss_pred HHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEE
Q 017180 237 MMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLL 316 (376)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvl 316 (376)
.... .... .....+.. .......+.......................... ....+.++ ++|++
T Consensus 140 ~~~~----~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i--~~P~l 202 (257)
T TIGR03611 140 YVHA----QALF---LYPADWIS---ENAARLAADEAHALAHFPGKANVLRRINALEAFD-----VSARLDRI--QHPVL 202 (257)
T ss_pred hhhh----hhhh---hccccHhh---ccchhhhhhhhhcccccCccHHHHHHHHHHHcCC-----cHHHhccc--CccEE
Confidence 0000 0000 00000000 0000000000000000000000010011111111 33456777 99999
Q ss_pred EEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 317 VVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 317 ii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+++|++|..++.+..+.+.+..++++++.++++ |++++++|+++++.|.+||++
T Consensus 203 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 203 LIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred EEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 999999999999999999888899999999998 999999999999999999863
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-29 Score=219.22 Aligned_cols=257 Identities=17% Similarity=0.164 Sum_probs=159.7
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVME 150 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~~ 150 (376)
.+|.+|+|+.+-++. .+++.|+|+||++ ++...|..++..|.+. ||+|+++|+||||.|+... ...+...+.
T Consensus 8 ~~g~~l~~~~~~~~~-~~~~~v~llHG~~--~~~~~~~~~~~~l~~~----g~~via~D~~G~G~S~~~~~~~~~~~~~~ 80 (276)
T PHA02857 8 LDNDYIYCKYWKPIT-YPKALVFISHGAG--EHSGRYEELAENISSL----GILVFSHDHIGHGRSNGEKMMIDDFGVYV 80 (276)
T ss_pred CCCCEEEEEeccCCC-CCCEEEEEeCCCc--cccchHHHHHHHHHhC----CCEEEEccCCCCCCCCCccCCcCCHHHHH
Confidence 358899998875532 2245566669999 9999999999999886 8999999999999998532 223555666
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
+|+.++++.+.... ...+++|+||||||.+|+.+|.++|++++++|+++|.... ..................
T Consensus 81 ~d~~~~l~~~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~------~~~~~~~~~~~~~~~~~~ 152 (276)
T PHA02857 81 RDVVQHVVTIKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNA------EAVPRLNLLAAKLMGIFY 152 (276)
T ss_pred HHHHHHHHHHHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccc------ccccHHHHHHHHHHHHhC
Confidence 66666665432111 2468999999999999999999999999999999984310 000000000000000000
Q ss_pred -cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCC--chhHHHhhccCCCCCcHHHHHHHHh
Q 017180 231 -APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGAR--YVPAAFLTGLLDPVNSREEFLQLFA 307 (376)
Q Consensus 231 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (376)
....... .+....+...+. ......+... .....+...... ......+.+.
T Consensus 153 ~~~~~~~~----------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~ 206 (276)
T PHA02857 153 PNKIVGKL----------------------CPESVSRDMDEV-YKYQYDPLVNHEKIKAGFASQVLK---ATNKVRKIIP 206 (276)
T ss_pred CCCccCCC----------------------CHhhccCCHHHH-HHHhcCCCccCCCccHHHHHHHHH---HHHHHHHhcc
Confidence 0000000 000000000000 0000000000 000000000000 0112455677
Q ss_pred cccCCCcEEEEEeCCCCCCCHHHHHHHhccc-CCceEEEeCCC-CCCCCCCh---HHHHHHHHHHHHhh
Q 017180 308 DLEGKLPLLVVSTEGSPRRSKAEMEALKGAK-GVTKFVEVPGA-LLPQEEYP---AMVAQELYQFLQQT 371 (376)
Q Consensus 308 ~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~-H~~~~e~p---e~~~~~i~~fl~~~ 371 (376)
++ ++|+|+|+|++|.++|.+..+++.+.. +++++++++++ |+++.|.+ +++.+.+.+||.+.
T Consensus 207 ~i--~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 207 KI--KTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred cC--CCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 88 999999999999999999999987654 57899999999 99998876 57899999999885
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-30 Score=226.17 Aligned_cols=259 Identities=19% Similarity=0.249 Sum_probs=164.5
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCC-CCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPK-MDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~-~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
+++||++|||+ ++...|+.++..|.+.. |++|+++|++|||.|+ .+. ..|+..++.+.+..++.+..
T Consensus 58 ~~pvlllHGF~--~~~~~w~~~~~~L~~~~---~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~------ 126 (326)
T KOG1454|consen 58 KPPVLLLHGFG--ASSFSWRRVVPLLSKAK---GLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVF------ 126 (326)
T ss_pred CCcEEEecccc--CCcccHhhhcccccccc---ceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhc------
Confidence 88999999999 99999999999999841 3999999999999554 433 46999999999999999987
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEE---EeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhc
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIA---AVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVS 244 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lv---l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (376)
..++++||||+||.+|..+|+.+|+.|+++| ++++.... ...........+................ .
T Consensus 127 ~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~ 197 (326)
T KOG1454|consen 127 VEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYS-------TPKGIKGLRRLLDKFLSALELLIPLSLT--E 197 (326)
T ss_pred CcceEEEEeCcHHHHHHHHHHhCcccccceeeeccccccccc-------CCcchhHHHHhhhhhccHhhhcCccccc--c
Confidence 7789999999999999999999999999999 55543210 0111111111111111110000000000 0
Q ss_pred cHHHHHHHHHh---cccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeC
Q 017180 245 NEKAIQSQYKS---HVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTE 321 (376)
Q Consensus 245 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~ 321 (376)
........... ..+.+.....+...............+.....+...... ..+.....++++. +||+|+++|+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~-~~pvlii~G~ 273 (326)
T KOG1454|consen 198 PVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLG---FDENLLSLIKKIW-KCPVLIIWGD 273 (326)
T ss_pred chhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccC---ccchHHHhhcccc-CCceEEEEcC
Confidence 00000000110 111111111111111111100000111111111111111 1122445667772 4999999999
Q ss_pred CCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 322 GSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 322 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
+|.++|.+..+.+++..|++++++++++ |.+++|.||++++.|..|+++..
T Consensus 274 ~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 274 KDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred cCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 9999999999999888899999999998 99999999999999999998764
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=227.82 Aligned_cols=280 Identities=13% Similarity=0.032 Sum_probs=163.3
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHH---HHHHhhhCCcceEEEEeCCCCCcCCCCCCC---CCCH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVA---QDIVQRVGKVNWRATIVDWPGLGYSDRPKM---DYNA 146 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~---~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~---~~~~ 146 (376)
+|++++|...|+..+...++||++||++ ++...|..++ +.|... +|+||++|+||||.|+.+.. .++.
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~--~~~~~~~~~~~~~~~l~~~----~~~vi~~D~~G~G~S~~~~~~~~~~~~ 97 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYS--GTHQDNEWLIGPGRALDPE----KYFIIIPNMFGNGLSSSPSNTPAPFNA 97 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCC--CCcccchhhccCCCccCcC----ceEEEEecCCCCCCCCCCCCCCCCCCC
Confidence 3789999999974322135566667777 6666665443 356533 79999999999999985532 3554
Q ss_pred HH-----HHHHHHH----HHhCCCCCCCCCCCc-EEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCC
Q 017180 147 DV-----MEKFVVD----LINAPDSPVSSSESD-LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDS 216 (376)
Q Consensus 147 ~~-----~~~~l~~----~l~~l~~~~~~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~ 216 (376)
+. +++++.+ ++++++ .++ ++||||||||.+|+.+|.++|++|+++|++++... ..+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~l~~~lg------i~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~-~~~~------ 164 (339)
T PRK07581 98 ARFPHVTIYDNVRAQHRLLTEKFG------IERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAK-TTPH------ 164 (339)
T ss_pred CCCCceeHHHHHHHHHHHHHHHhC------CCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCC-CCHH------
Confidence 43 4666655 677887 677 57999999999999999999999999999986421 0000
Q ss_pred chhhhhHHHHhhhccCch--------h-hHHhhhhh--ccHHHHHHHHHhcccCCCCCCC-hHHHHHHHHHHhccCCCch
Q 017180 217 SMETRYGLLRGTLRAPGV--------G-WMMYNMLV--SNEKAIQSQYKSHVYSNPDNVT-PGIVESRYALTKRKGARYV 284 (376)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 284 (376)
...........+...+.. . ..+..... ........++....+....... ++....+............
T Consensus 165 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (339)
T PRK07581 165 NFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNN 244 (339)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCccc
Confidence 000000000000000000 0 00000000 0000000011101000000000 1222222221111111111
Q ss_pred hHHHhh----c-cCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCC-C-CCCCCCCh
Q 017180 285 PAAFLT----G-LLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPG-A-LLPQEEYP 357 (376)
Q Consensus 285 ~~~~~~----~-~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~-H~~~~e~p 357 (376)
....+. . .........+..+.+++| ++|||+|+|++|..++.+..+.+.+.+++++++++++ + |++++|+|
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I--~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~ 322 (339)
T PRK07581 245 LLAMLWTWQRGDISRNPAYGGDLAAALGSI--TAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQN 322 (339)
T ss_pred HHHHHHHhhhcccccCcccCCCHHHHHhcC--CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCc
Confidence 222111 0 000000001256678888 9999999999999999999999998999999999998 7 99999999
Q ss_pred HHHHHHHHHHHHhhcC
Q 017180 358 AMVAQELYQFLQQTFE 373 (376)
Q Consensus 358 e~~~~~i~~fl~~~~~ 373 (376)
++++..|.+||++.++
T Consensus 323 ~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 323 PADIAFIDAALKELLA 338 (339)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999875
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=217.25 Aligned_cols=238 Identities=14% Similarity=0.150 Sum_probs=149.6
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+|+|||+||++ ++...|+.+++.| + +|+|+++|+||||.|+.+. ..+.+.+++++.+++++++ .+
T Consensus 2 ~p~vvllHG~~--~~~~~w~~~~~~l-~-----~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~l~~~l~~~~------~~ 66 (242)
T PRK11126 2 LPWLVFLHGLL--GSGQDWQPVGEAL-P-----DYPRLYIDLPGHGGSAAIS-VDGFADVSRLLSQTLQSYN------IL 66 (242)
T ss_pred CCEEEEECCCC--CChHHHHHHHHHc-C-----CCCEEEecCCCCCCCCCcc-ccCHHHHHHHHHHHHHHcC------CC
Confidence 67899999999 9999999999988 4 6999999999999998664 3589999999999999986 78
Q ss_pred cEEEEecchHHHHHHHHHHhCCCC-cceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHH
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVK-PTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKA 248 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (376)
+++++||||||.+++.+|.++|+. |++++++++... .. .. ......+. ........+... .....
T Consensus 67 ~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~--~~---~~---~~~~~~~~----~~~~~~~~~~~~--~~~~~ 132 (242)
T PRK11126 67 PYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPG--LQ---NA---EERQARWQ----NDRQWAQRFRQE--PLEQV 132 (242)
T ss_pred CeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCC--CC---CH---HHHHHHHh----hhHHHHHHhccC--cHHHH
Confidence 999999999999999999998765 999999876321 10 00 00000000 000000000000 00111
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCH
Q 017180 249 IQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSK 328 (376)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~ 328 (376)
+..++....+. ...++....+...... ............... . ...++.+.+.++ ++|+++|+|++|..+.
T Consensus 133 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~-~~~~~~~~l~~i--~~P~lii~G~~D~~~~- 203 (242)
T PRK11126 133 LADWYQQPVFA---SLNAEQRQQLVAKRSN-NNGAAVAAMLEATSL-A-KQPDLRPALQAL--TFPFYYLCGERDSKFQ- 203 (242)
T ss_pred HHHHHhcchhh---ccCccHHHHHHHhccc-CCHHHHHHHHHhcCc-c-cCCcHHHHhhcc--CCCeEEEEeCCcchHH-
Confidence 11111111111 1122222211111110 001111111111100 0 111245677888 9999999999998553
Q ss_pred HHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 329 AEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
. +.+. .++++++++++ |++++|+|+++++.|.+|+.+
T Consensus 204 ~----~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 204 A----LAQQ-LALPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred H----HHHH-hcCeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 2 2222 37899999998 999999999999999999976
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=208.08 Aligned_cols=263 Identities=12% Similarity=0.103 Sum_probs=163.6
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC----CCCHHHHHHHHHHHHhCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM----DYNADVMEKFVVDLINAPDSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~----~~~~~~~~~~l~~~l~~l~~~~~ 165 (376)
+.|+|||||+| ++...|-..++.|++ .++|+++|++|+|+|++|.. ......+.+-++++-.+.+
T Consensus 90 ~~plVliHGyG--Ag~g~f~~Nf~~La~-----~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~---- 158 (365)
T KOG4409|consen 90 KTPLVLIHGYG--AGLGLFFRNFDDLAK-----IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMG---- 158 (365)
T ss_pred CCcEEEEeccc--hhHHHHHHhhhhhhh-----cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcC----
Confidence 67999999999 999999999999999 79999999999999998763 2333468888888888887
Q ss_pred CCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCC-cccCCCCchhhhhHHHHhhhccCchhhHHhhhhhc
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLP-IVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVS 244 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (376)
.++.+|||||+||.++..||.+||++|+.|||++|.+...-+ ...............+.... ...-.....+.+..
T Consensus 159 --L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~-~~~nPl~~LR~~Gp 235 (365)
T KOG4409|consen 159 --LEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVA-TNFNPLALLRLMGP 235 (365)
T ss_pred --CcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhh-hcCCHHHHHHhccc
Confidence 789999999999999999999999999999999996533222 11111111111111000000 00000011111100
Q ss_pred c-HHHHHHHHHhcccC-CCCCCChHHHHH-HHHHHh-ccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEe
Q 017180 245 N-EKAIQSQYKSHVYS-NPDNVTPGIVES-RYALTK-RKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVST 320 (376)
Q Consensus 245 ~-~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G 320 (376)
- +..+.. +....+. -+....++.+-. .+.... .+.+..++...+....- .+.-+.+.+..+...||+++|+|
T Consensus 236 ~Gp~Lv~~-~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~---Ar~Pm~~r~~~l~~~~pv~fiyG 311 (365)
T KOG4409|consen 236 LGPKLVSR-LRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGW---ARRPMIQRLRELKKDVPVTFIYG 311 (365)
T ss_pred cchHHHhh-hhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccch---hhhhHHHHHHhhccCCCEEEEec
Confidence 0 111111 1111111 111233444233 333322 22333333333322111 22235566666623499999999
Q ss_pred CCCCCCCHHHHHHHhc--ccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 321 EGSPRRSKAEMEALKG--AKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 321 ~~D~~~~~~~~~~~~~--~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
++|-+-. ....++.. ....++.++++++ |.+++++|+.|++.|.+++++.
T Consensus 312 ~~dWmD~-~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 312 DRDWMDK-NAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred Ccccccc-hhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 9995444 44444433 3446899999999 9999999999999999999864
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=224.98 Aligned_cols=273 Identities=14% Similarity=0.082 Sum_probs=166.2
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC------CCC
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK------MDY 144 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~------~~~ 144 (376)
..+|.+++|..++++.+ +++|||+||++ .+...|..++..|.+. ||+|+++|+||||.|+.+. ..+
T Consensus 37 ~~~g~~l~~~~~~~~~~--~~~vll~HG~~--~~~~~y~~~~~~l~~~----g~~v~~~D~~G~G~S~~~~~~~~~~~~~ 108 (330)
T PRK10749 37 GVDDIPIRFVRFRAPHH--DRVVVICPGRI--ESYVKYAELAYDLFHL----GYDVLIIDHRGQGRSGRLLDDPHRGHVE 108 (330)
T ss_pred cCCCCEEEEEEccCCCC--CcEEEEECCcc--chHHHHHHHHHHHHHC----CCeEEEEcCCCCCCCCCCCCCCCcCccc
Confidence 45688999999886432 67899999999 9999999999888776 9999999999999998542 125
Q ss_pred CHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHH
Q 017180 145 NADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGL 224 (376)
Q Consensus 145 ~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (376)
+.+++++|+.++++++.... ...+++++||||||.+++.+|.++|+.++++|+++|......+. .. ......
T Consensus 109 ~~~~~~~d~~~~~~~~~~~~--~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~-~~-----~~~~~~ 180 (330)
T PRK10749 109 RFNDYVDDLAAFWQQEIQPG--PYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL-PS-----WMARRI 180 (330)
T ss_pred cHHHHHHHHHHHHHHHHhcC--CCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC-Cc-----HHHHHH
Confidence 88999999999998752111 25789999999999999999999999999999999843111000 00 000000
Q ss_pred HHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHh-ccCCC--chhHHHhhccCCCCCcHHH
Q 017180 225 LRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTK-RKGAR--YVPAAFLTGLLDPVNSREE 301 (376)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~ 301 (376)
.......+..... +... ... +.......+.-...++.......... .+... .....+...... ....
T Consensus 181 ~~~~~~~~~~~~~-~~~~--~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 250 (330)
T PRK10749 181 LNWAEGHPRIRDG-YAIG--TGR----WRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESIL---AGEQ 250 (330)
T ss_pred HHHHHHhcCCCCc-CCCC--CCC----CCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHH---HHHH
Confidence 0000000000000 0000 000 00000000000011222111111111 11100 001111110000 0011
Q ss_pred HHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc-------CCceEEEeCCC-CCCCCCCh---HHHHHHHHHHHHh
Q 017180 302 FLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK-------GVTKFVEVPGA-LLPQEEYP---AMVAQELYQFLQQ 370 (376)
Q Consensus 302 ~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~-------~~~~~~~~~~~-H~~~~e~p---e~~~~~i~~fl~~ 370 (376)
+...+.++ ++|+|+|+|++|.+++.+..+.+.+.. +++++++++++ |.++.|.+ +.+.+.|.+||++
T Consensus 251 ~~~~~~~i--~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 251 VLAGAGDI--TTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred HHhhccCC--CCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 23455677 899999999999999998888775533 45689999999 99998876 6788999999986
Q ss_pred h
Q 017180 371 T 371 (376)
Q Consensus 371 ~ 371 (376)
.
T Consensus 329 ~ 329 (330)
T PRK10749 329 H 329 (330)
T ss_pred c
Confidence 4
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-29 Score=222.31 Aligned_cols=265 Identities=11% Similarity=0.091 Sum_probs=164.6
Q ss_pred CCceeEEEEecccCCC-CCCCcEEEecCCCCCccc-hHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHH
Q 017180 72 ENSINIYYEKHERESP-DPSKNILMIPTISDVSTV-EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADV 148 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~-~~~~~vvllHG~~~~~~~-~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~ 148 (376)
.+|.+|+|+.+++... .++++|||+||++ .+. ..|..+...|.++ ||+|+++|+||||.|+.+. ...+.+.
T Consensus 40 ~dg~~l~~~~~~~~~~~~~~~~VvllHG~~--~~~~~~~~~~~~~L~~~----Gy~V~~~D~rGhG~S~~~~~~~~~~~~ 113 (330)
T PLN02298 40 PRGLSLFTRSWLPSSSSPPRALIFMVHGYG--NDISWTFQSTAIFLAQM----GFACFALDLEGHGRSEGLRAYVPNVDL 113 (330)
T ss_pred CCCCEEEEEEEecCCCCCCceEEEEEcCCC--CCcceehhHHHHHHHhC----CCEEEEecCCCCCCCCCccccCCCHHH
Confidence 4699999988765422 2256799999998 653 4566777788876 9999999999999998433 3467889
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
+++|+.++++.+.........+++|+||||||.+++.++.++|++|+++|+++|...... .. ................
T Consensus 114 ~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~-~~~~~~~~~~~~~~~~ 191 (330)
T PLN02298 114 VVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISD-KI-RPPWPIPQILTFVARF 191 (330)
T ss_pred HHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCc-cc-CCchHHHHHHHHHHHH
Confidence 999999999887522111235799999999999999999999999999999998431100 00 0000000000000000
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCC---Cc---hhHHHhhccCCCCCcHHHH
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGA---RY---VPAAFLTGLLDPVNSREEF 302 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~ 302 (376)
........ ...... . ............ ..+.. .. ....... ..+..
T Consensus 192 ~~~~~~~~-----------------~~~~~~-~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-------~~~~~ 243 (330)
T PLN02298 192 LPTLAIVP-----------------TADLLE-K-SVKVPAKKIIAK--RNPMRYNGKPRLGTVVELLR-------VTDYL 243 (330)
T ss_pred CCCCcccc-----------------CCCccc-c-cccCHHHHHHHH--hCccccCCCccHHHHHHHHH-------HHHHH
Confidence 00000000 000000 0 000000000000 00000 00 0001110 01123
Q ss_pred HHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc--CCceEEEeCCC-CCCCCCChH----HHHHHHHHHHHhhcCC
Q 017180 303 LQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK--GVTKFVEVPGA-LLPQEEYPA----MVAQELYQFLQQTFEP 374 (376)
Q Consensus 303 ~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~-H~~~~e~pe----~~~~~i~~fl~~~~~~ 374 (376)
.+.+.++ ++|+|+|+|++|.+++.+..+.+.+.. +++++++++++ |.++.++|+ ++.+.|.+||.+..++
T Consensus 244 ~~~l~~i--~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~ 320 (330)
T PLN02298 244 GKKLKDV--SIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTG 320 (330)
T ss_pred HHhhhhc--CCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccC
Confidence 4567788 999999999999999999999886654 47899999999 999998885 4677889999987654
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=226.76 Aligned_cols=264 Identities=12% Similarity=0.060 Sum_probs=160.9
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccch------------HhHHHHH---HH-HhhhCCcceEEEEeCCCCCcC
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVE------------EWRLVAQ---DI-VQRVGKVNWRATIVDWPGLGY 136 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~------------~~~~~~~---~L-~~~~~~~~~~Vi~~D~~G~G~ 136 (376)
+|.+++|...|++ ++|+||+||+. ++.. .|..++. .| .+ +|+||++|+||||.
T Consensus 44 ~~~~l~y~~~G~~----~~p~vll~g~~--~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~-----~~~Vi~~Dl~G~g~ 112 (343)
T PRK08775 44 EDLRLRYELIGPA----GAPVVFVAGGI--SAHRHVAATATFPEKGWWEGLVGSGRALDPA-----RFRLLAFDFIGADG 112 (343)
T ss_pred CCceEEEEEeccC----CCCEEEEecCC--CcccccccccCCCCCCcchhccCCCCccCcc-----ccEEEEEeCCCCCC
Confidence 4889999999863 44688887766 5544 6888886 56 35 79999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCc-EEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCC
Q 017180 137 SDRPKMDYNADVMEKFVVDLINAPDSPVSSSESD-LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRD 215 (376)
Q Consensus 137 S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~ 215 (376)
|.. ..++.+++++|+.+++++++ .++ ++|+||||||.+|+.+|.++|++|+++|++++..... +.
T Consensus 113 s~~--~~~~~~~~a~dl~~ll~~l~------l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~-~~----- 178 (343)
T PRK08775 113 SLD--VPIDTADQADAIALLLDALG------IARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAH-PY----- 178 (343)
T ss_pred CCC--CCCCHHHHHHHHHHHHHHcC------CCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCC-HH-----
Confidence 852 35788999999999999997 544 5799999999999999999999999999998743110 00
Q ss_pred CchhhhhHHHHhhh--c-c---Cchh-----hHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHH---HHhccCC
Q 017180 216 SSMETRYGLLRGTL--R-A---PGVG-----WMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYA---LTKRKGA 281 (376)
Q Consensus 216 ~~~~~~~~~~~~~~--~-~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 281 (376)
............ . . .... ....... .....+...+..................... .......
T Consensus 179 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 255 (343)
T PRK08775 179 --AAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSY-RTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTP 255 (343)
T ss_pred --HHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHc-CCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcC
Confidence 000000000000 0 0 0000 0000000 0011111111100000000001111111110 0000111
Q ss_pred CchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc-CCceEEEeCC-C-CCCCCCChH
Q 017180 282 RYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK-GVTKFVEVPG-A-LLPQEEYPA 358 (376)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~-~-H~~~~e~pe 358 (376)
...+..+...... ....+.+| ++|+|+|+|++|.+++.+..+.+.+.. ++++++++++ + |++++|+|+
T Consensus 256 ~~~~~~~~~~~~~-------~~~~l~~I--~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe 326 (343)
T PRK08775 256 VNAYLRLSESIDL-------HRVDPEAI--RVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETD 326 (343)
T ss_pred hhHHHHHHHHHhh-------cCCChhcC--CCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHH
Confidence 1111111110000 01125677 999999999999999998888887766 7899999984 6 999999999
Q ss_pred HHHHHHHHHHHhhcC
Q 017180 359 MVAQELYQFLQQTFE 373 (376)
Q Consensus 359 ~~~~~i~~fl~~~~~ 373 (376)
+|++.|.+||.+..+
T Consensus 327 ~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 327 RIDAILTTALRSTGE 341 (343)
T ss_pred HHHHHHHHHHHhccc
Confidence 999999999988754
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-28 Score=225.60 Aligned_cols=252 Identities=19% Similarity=0.290 Sum_probs=169.0
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFV 153 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l 153 (376)
+.+++|...|+++ +++|||+||++ ++...|..+...|.+ +|+|+++|+||||.|.......+.+++++++
T Consensus 118 ~~~i~~~~~g~~~---~~~vl~~HG~~--~~~~~~~~~~~~l~~-----~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~ 187 (371)
T PRK14875 118 GRTVRYLRLGEGD---GTPVVLIHGFG--GDLNNWLFNHAALAA-----GRPVIALDLPGHGASSKAVGAGSLDELAAAV 187 (371)
T ss_pred CcEEEEecccCCC---CCeEEEECCCC--CccchHHHHHHHHhc-----CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHH
Confidence 6778898888654 67899999999 999999999999988 7999999999999997555678899999999
Q ss_pred HHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCc
Q 017180 154 VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPG 233 (376)
Q Consensus 154 ~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (376)
.++++.++ ..+++++|||+||.+++.+|.++|+++.++|+++|..... ... ..+...+....
T Consensus 188 ~~~~~~~~------~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~--~~~---------~~~~~~~~~~~- 249 (371)
T PRK14875 188 LAFLDALG------IERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGP--EIN---------GDYIDGFVAAE- 249 (371)
T ss_pred HHHHHhcC------CccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCc--ccc---------hhHHHHhhccc-
Confidence 99999986 6789999999999999999999999999999998743111 000 00000000000
Q ss_pred hhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCC
Q 017180 234 VGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKL 313 (376)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 313 (376)
....+..++. ..+.+........................+..+............+....+.++ +|
T Consensus 250 -----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~ 315 (371)
T PRK14875 250 -----------SRRELKPVLE-LLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASL--AI 315 (371)
T ss_pred -----------chhHHHHHHH-HHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcC--CC
Confidence 0000000010 011111122222222222111111111111111111111111122355567788 99
Q ss_pred cEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 314 PLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 314 Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
|+|+++|++|.+++.+..+.+. +++++.+++++ |++++++|+++++.|.+||++
T Consensus 316 Pvlii~g~~D~~vp~~~~~~l~---~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 316 PVLVIWGEQDRIIPAAHAQGLP---DGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred CEEEEEECCCCccCHHHHhhcc---CCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 9999999999999987765543 46889999988 999999999999999999975
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-29 Score=212.71 Aligned_cols=238 Identities=12% Similarity=0.079 Sum_probs=151.0
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
++|||+||++ ++...|+.++..|.+ +|+|+++|+||||.|+.. ..++.+++++++.+++ .++
T Consensus 5 ~~iv~~HG~~--~~~~~~~~~~~~l~~-----~~~vi~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~----------~~~ 66 (245)
T TIGR01738 5 VHLVLIHGWG--MNAEVFRCLDEELSA-----HFTLHLVDLPGHGRSRGF-GPLSLADAAEAIAAQA----------PDP 66 (245)
T ss_pred ceEEEEcCCC--CchhhHHHHHHhhcc-----CeEEEEecCCcCccCCCC-CCcCHHHHHHHHHHhC----------CCC
Confidence 7899999999 999999999999988 899999999999998754 3467777766665432 357
Q ss_pred EEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHH
Q 017180 171 LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQ 250 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (376)
++++||||||.+++.+|.++|++++++|++++........... ...... ....+.. .+.. .....+.
T Consensus 67 ~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~-~~~~~~---~~~~~~~------~~~~---~~~~~~~ 133 (245)
T TIGR01738 67 AIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWP-EGIKPD---VLTGFQQ------QLSD---DYQRTIE 133 (245)
T ss_pred eEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCccc-ccCCHH---HHHHHHH------Hhhh---hHHHHHH
Confidence 9999999999999999999999999999998743110000000 000000 0000000 0000 0000111
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHHHhccCCC--chhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCH
Q 017180 251 SQYKSHVYSNPDNVTPGIVESRYALTKRKGAR--YVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSK 328 (376)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~ 328 (376)
.+........ ....+............... ......+...... +....+.++ ++|+++|+|++|.+++.
T Consensus 134 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~i--~~Pvlii~g~~D~~~~~ 204 (245)
T TIGR01738 134 RFLALQTLGT--PTARQDARALKQTLLARPTPNVQVLQAGLEILATV-----DLRQPLQNI--SVPFLRLYGYLDGLVPA 204 (245)
T ss_pred HHHHHHHhcC--CccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcc-----cHHHHHhcC--CCCEEEEeecCCcccCH
Confidence 1111111110 11111111111111111100 1111111111111 145567788 99999999999999999
Q ss_pred HHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHH
Q 017180 329 AEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFL 368 (376)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl 368 (376)
+..+.+.+..+++++++++++ |++++|+|+++++.|.+|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 205 KVVPYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred HHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 999989888999999999998 9999999999999999995
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-28 Score=222.59 Aligned_cols=280 Identities=13% Similarity=0.057 Sum_probs=166.6
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchH-------------hHHHH----HHHHhhhCCcceEEEEeCCCCC-c
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEE-------------WRLVA----QDIVQRVGKVNWRATIVDWPGL-G 135 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~-------------~~~~~----~~L~~~~~~~~~~Vi~~D~~G~-G 135 (376)
|.+++|...|+.+.+.+|+|||+||++ ++... |..++ ..+.+ +|+||++|+||+ |
T Consensus 32 ~~~~~y~~~G~~~~~~~p~vvl~HG~~--~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~-----~~~vi~~Dl~G~~~ 104 (379)
T PRK00175 32 PVELAYETYGTLNADRSNAVLICHALT--GDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTD-----RYFVICSNVLGGCK 104 (379)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCcC--CchhhcccccccCCCCcchhhccCCCCccCcc-----ceEEEeccCCCCCC
Confidence 788999999964322268899999999 87764 66665 23355 899999999993 5
Q ss_pred CCCCCC--------------CCCCHHHHHHHHHHHHhCCCCCCCCCCCc-EEEEecchHHHHHHHHHHhCCCCcceEEEe
Q 017180 136 YSDRPK--------------MDYNADVMEKFVVDLINAPDSPVSSSESD-LVIFGGGHAATLTVRAAKKNLVKPTAIAAV 200 (376)
Q Consensus 136 ~S~~~~--------------~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~ 200 (376)
.|+.+. ..++++++++++.+++++++ .++ ++++||||||.+++.+|.++|++|+++|++
T Consensus 105 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~ 178 (379)
T PRK00175 105 GSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALG------ITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVI 178 (379)
T ss_pred CCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhC------CCCceEEEEECHHHHHHHHHHHhChHhhhEEEEE
Confidence 554221 15899999999999999997 666 589999999999999999999999999999
Q ss_pred ccCCCCCCCcccCCCCch-hhhhHHHHhhhc-----------cCchhhHHhhh----hhccHHHHHHHHHhcccCCCC--
Q 017180 201 APTWAGPLPIVFGRDSSM-ETRYGLLRGTLR-----------APGVGWMMYNM----LVSNEKAIQSQYKSHVYSNPD-- 262 (376)
Q Consensus 201 ~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-- 262 (376)
++..... + ....+ ......+..... .+.......+. .......+...+.........
T Consensus 179 ~~~~~~~-~----~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~ 253 (379)
T PRK00175 179 ASSARLS-A----QNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPF 253 (379)
T ss_pred CCCcccC-H----HHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCcccccccccc
Confidence 8742110 0 00000 000011100000 00000000000 000011111111111110000
Q ss_pred CC-ChHHHHHHHH----HHhccCCCchhH---HHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHH
Q 017180 263 NV-TPGIVESRYA----LTKRKGARYVPA---AFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEAL 334 (376)
Q Consensus 263 ~~-~~~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~ 334 (376)
.. .....+.+.. ..........+. ..+...........++.+.+++| ++|+|+|+|++|.+++++..+.+
T Consensus 254 ~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I--~~PtLvI~G~~D~~~p~~~~~~l 331 (379)
T PRK00175 254 GFDVEFQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARI--KARFLVVSFTSDWLFPPARSREI 331 (379)
T ss_pred CCCccchHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcC--CCCEEEEEECCccccCHHHHHHH
Confidence 00 0011111110 001011111111 11111000000001256788899 99999999999999999999999
Q ss_pred hcccCCc----eEEEeC-CC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 335 KGAKGVT----KFVEVP-GA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 335 ~~~~~~~----~~~~~~-~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
.+.++++ ++++++ ++ |++++|+|+++++.|.+||.+...
T Consensus 332 a~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 332 VDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred HHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhhh
Confidence 8888776 777775 77 999999999999999999998754
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=221.62 Aligned_cols=277 Identities=16% Similarity=0.094 Sum_probs=162.4
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccch-----------HhHHHHH---HHHhhhCCcceEEEEeCCCC--CcCC
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVE-----------EWRLVAQ---DIVQRVGKVNWRATIVDWPG--LGYS 137 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~-----------~~~~~~~---~L~~~~~~~~~~Vi~~D~~G--~G~S 137 (376)
|.+|+|..+|+.+...+++|||+||++ ++.. .|+.++. .|... +|+||++|+|| ||.|
T Consensus 15 ~~~~~y~~~g~~~~~~~~~vll~Hg~~--~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~----~~~vi~~D~~G~~~g~s 88 (351)
T TIGR01392 15 DVRVAYETYGTLNAERSNAVLVCHALT--GDAHVAGYHDDGDPGWWDDLIGPGRAIDTD----RYFVVCSNVLGGCYGST 88 (351)
T ss_pred CceEEEEeccccCCCCCCEEEEcCCcC--cchhhcccCCCCCCCchhhccCCCCCcCCC----ceEEEEecCCCCCCCCC
Confidence 789999999964322257899999999 7553 4777652 44332 89999999999 5555
Q ss_pred CCC----C--------CCCCHHHHHHHHHHHHhCCCCCCCCCCCc-EEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 138 DRP----K--------MDYNADVMEKFVVDLINAPDSPVSSSESD-LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 138 ~~~----~--------~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
... . ..++++++++++.+++++++ .++ ++++||||||.+++.+|.++|++|+++|++++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 89 GPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLG------IEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred CCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcC------CCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCC
Confidence 421 1 25889999999999999997 666 9999999999999999999999999999998742
Q ss_pred CCCCCcccCCCCchhhhhHHHHhhhcc----------CchhhHHhhhh----hccHHHHHHHHHhcccCCCCC----CCh
Q 017180 205 AGPLPIVFGRDSSMETRYGLLRGTLRA----------PGVGWMMYNML----VSNEKAIQSQYKSHVYSNPDN----VTP 266 (376)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~ 266 (376)
... +. . ..........+...... +.......... ......+...+.......... ...
T Consensus 163 ~~~-~~--~-~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 238 (351)
T TIGR01392 163 RHS-AW--C-IAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTR 238 (351)
T ss_pred cCC-HH--H-HHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCcc
Confidence 110 00 0 00000000000000000 00000000000 000111111111110000000 000
Q ss_pred HHHHHHH-----HHHhccCCCc--hhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC
Q 017180 267 GIVESRY-----ALTKRKGARY--VPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG 339 (376)
Q Consensus 267 ~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~ 339 (376)
...+.+. .......... .....+.. .+......++.+.+++| ++|+|+|+|++|.++|++..+.+.+.++
T Consensus 239 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~-~d~~~~~~~~~~~l~~I--~~P~Lvi~G~~D~~~p~~~~~~~a~~i~ 315 (351)
T TIGR01392 239 FQVESYLRYQGDKFVDRFDANSYLYLTRALDT-HDLGRGRGSLTEALSRI--KAPFLVVSITSDWLFPPAESRELAKALP 315 (351)
T ss_pred chHHHHHHHHHHHHHhhcCcchHHHHHHHHHh-cCCcCCCCCHHHHHhhC--CCCEEEEEeCCccccCHHHHHHHHHHHh
Confidence 0011111 0111111100 11111111 01000012256788889 9999999999999999999999998888
Q ss_pred CceEE-----EeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 340 VTKFV-----EVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 340 ~~~~~-----~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
+.+++ +++++ |++++|+|++|++.|.+||+
T Consensus 316 ~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 316 AAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred hcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 87765 55677 99999999999999999984
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-29 Score=215.07 Aligned_cols=259 Identities=15% Similarity=0.131 Sum_probs=162.3
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEK 151 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~ 151 (376)
+|-+++|.+-+.. +|+|||+||++ .+...|..++..|.+. ||+|+++|+||||.|... ...++++++++
T Consensus 5 ~~~~~~~~~~~~~----~p~vvliHG~~--~~~~~w~~~~~~L~~~----g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~ 74 (273)
T PLN02211 5 NGEEVTDMKPNRQ----PPHFVLIHGIS--GGSWCWYKIRCLMENS----GYKVTCIDLKSAGIDQSDADSVTTFDEYNK 74 (273)
T ss_pred cccccccccccCC----CCeEEEECCCC--CCcCcHHHHHHHHHhC----CCEEEEecccCCCCCCCCcccCCCHHHHHH
Confidence 4777888773222 78899999999 9999999999999875 899999999999998633 33589999999
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
++.++++++. ..++++||||||||.+++.++.++|++|+++|++++.... ..+.....+......+......
T Consensus 75 ~l~~~i~~l~-----~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~ 146 (273)
T PLN02211 75 PLIDFLSSLP-----ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLK---LGFQTDEDMKDGVPDLSEFGDV 146 (273)
T ss_pred HHHHHHHhcC-----CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCC---CCCCHHHHHhccccchhhhccc
Confidence 9999999984 2478999999999999999999999999999999764210 0000000000000000000000
Q ss_pred -C-chhh-HH---hhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHH
Q 017180 232 -P-GVGW-MM---YNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQL 305 (376)
Q Consensus 232 -~-~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (376)
. .... .. .... -...... ...+. ..+++..... .....+.....+ .... ..+.
T Consensus 147 ~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~---~~~~~~~~~~-~~~~~~~~~~~~-------~~~~-----~~~~ 205 (273)
T PLN02211 147 YELGFGLGPDQPPTSAI-IKKEFRR----KILYQ---MSPQEDSTLA-AMLLRPGPILAL-------RSAR-----FEEE 205 (273)
T ss_pred eeeeeccCCCCCCceee-eCHHHHH----HHHhc---CCCHHHHHHH-HHhcCCcCcccc-------cccc-----cccc
Confidence 0 0000 00 0000 0000000 00111 1111111111 111111110000 0000 1111
Q ss_pred HhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhh
Q 017180 306 FADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 306 ~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
..++. ++|+++|.|++|..+|++..+.+.+..+..+++.++.+|.+++++|+++++.|.++....
T Consensus 206 ~~~~~-~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 206 TGDID-KVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELESDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred ccccC-ccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEECCCCCccccCHHHHHHHHHHHHHHh
Confidence 22221 679999999999999999999999888888999998559999999999999999887654
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=209.74 Aligned_cols=263 Identities=13% Similarity=0.111 Sum_probs=158.1
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccc-hHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-C--CCCHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTV-EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-M--DYNADVM 149 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~-~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~--~~~~~~~ 149 (376)
|.++.|...+.... +++|||+||++ ++. ..|..+...+.+. ||+|+++|+||||.|+.+. . .++.+.+
T Consensus 11 ~~~~~~~~~~~~~~--~~~vl~~hG~~--g~~~~~~~~~~~~l~~~----g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 82 (288)
T TIGR01250 11 GGYHLFTKTGGEGE--KIKLLLLHGGP--GMSHEYLENLRELLKEE----GREVIMYDQLGCGYSDQPDDSDELWTIDYF 82 (288)
T ss_pred CCeEEEEeccCCCC--CCeEEEEcCCC--CccHHHHHHHHHHHHhc----CCEEEEEcCCCCCCCCCCCcccccccHHHH
Confidence 55677877775432 67899999976 544 4455555666654 7999999999999998553 2 3889999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhh
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (376)
++++.+++++++ .++++++||||||.+++.+|..+|++++++|++++... .+.. ........ ..+
T Consensus 83 ~~~~~~~~~~~~------~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~--~~~~------~~~~~~~~-~~~ 147 (288)
T TIGR01250 83 VDELEEVREKLG------LDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDS--APEY------VKELNRLR-KEL 147 (288)
T ss_pred HHHHHHHHHHcC------CCcEEEEEeehHHHHHHHHHHhCccccceeeEeccccc--chHH------HHHHHHHH-hhc
Confidence 999999999986 67799999999999999999999999999999986321 0000 00000000 000
Q ss_pred ccCchhhHHhhhh----hccH---HHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhc--c-CCCCCcH
Q 017180 230 RAPGVGWMMYNML----VSNE---KAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTG--L-LDPVNSR 299 (376)
Q Consensus 230 ~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~ 299 (376)
.. .....+.... .... ..+....... .... ...+......... .....+..+... . .......
T Consensus 148 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 220 (288)
T TIGR01250 148 PP-EVRAAIKRCEASGDYDNPEYQEAVEVFYHHL-LCRT-RKWPEALKHLKSG----MNTNVYNIMQGPNEFTITGNLKD 220 (288)
T ss_pred Ch-hHHHHHHHHHhccCcchHHHHHHHHHHHHHh-hccc-ccchHHHHHHhhc----cCHHHHhcccCCccccccccccc
Confidence 00 0000000000 0000 0011000000 0000 0111111111000 000000000000 0 0000001
Q ss_pred HHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 300 EEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 300 ~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
.+..+.+.++ ++|+++++|++|.+ +++..+.+.+..+++++++++++ |++++|+|+++++.|.+||+
T Consensus 221 ~~~~~~l~~i--~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 221 WDITDKLSEI--KVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred cCHHHHhhcc--CCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 1244567788 99999999999985 56778888888899999999998 99999999999999999984
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-27 Score=214.71 Aligned_cols=276 Identities=11% Similarity=0.081 Sum_probs=159.1
Q ss_pred eEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCC-H----HHHH
Q 017180 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYN-A----DVME 150 (376)
Q Consensus 76 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~-~----~~~~ 150 (376)
++++........ +|+|||+||++ .+...|...+..|.+ +|+|+++|+||||.|+.+...++ . +.++
T Consensus 93 ~~~~~~~~~~~~--~p~vvllHG~~--~~~~~~~~~~~~L~~-----~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~ 163 (402)
T PLN02894 93 FINTVTFDSKED--APTLVMVHGYG--ASQGFFFRNFDALAS-----RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFI 163 (402)
T ss_pred eEEEEEecCCCC--CCEEEEECCCC--cchhHHHHHHHHHHh-----CCEEEEECCCCCCCCCCCCcccccHHHHHHHHH
Confidence 555444332221 68999999999 888999999999988 79999999999999986643221 1 2356
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhh-hhHHHHhhh
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMET-RYGLLRGTL 229 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 229 (376)
+++.++++.++ .++++|+||||||.+++.+|.++|++|+++|+++|......+.... ..... ...+...++
T Consensus 164 ~~i~~~~~~l~------~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~ 235 (402)
T PLN02894 164 DSFEEWRKAKN------LSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKS--EWLTKFRATWKGAVL 235 (402)
T ss_pred HHHHHHHHHcC------CCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhH--HHHhhcchhHHHHHH
Confidence 67778888776 6689999999999999999999999999999998853211110000 00000 000000000
Q ss_pred ----ccCchhhHHhhhhhc-cHHHHHHHHHhcccC--CCCCCChHHH----HHHHHHHhccCCCchhHHHhhccCCCCCc
Q 017180 230 ----RAPGVGWMMYNMLVS-NEKAIQSQYKSHVYS--NPDNVTPGIV----ESRYALTKRKGARYVPAAFLTGLLDPVNS 298 (376)
Q Consensus 230 ----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (376)
............... ....+.......... .....+++.. +.................+...... . .
T Consensus 236 ~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 313 (402)
T PLN02894 236 NHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGA-F-A 313 (402)
T ss_pred HHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCch-h-h
Confidence 000000000100000 001111111110000 0001121111 1111111111111111112211110 0 1
Q ss_pred HHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhc-ccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 299 REEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKG-AKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 299 ~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
.......+.+| ++|+++|+|++|.+.+ ...+.+.+ ..+.+++++++++ |+++.|+|++|++.|.+|++..+.
T Consensus 314 ~~~~~~~l~~I--~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~ 387 (402)
T PLN02894 314 RKPLLESASEW--KVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLS 387 (402)
T ss_pred cchHhhhcccC--CCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhcc
Confidence 11245567788 9999999999998776 44444443 3346889999999 999999999999999999987654
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-29 Score=209.34 Aligned_cols=225 Identities=18% Similarity=0.272 Sum_probs=151.8
Q ss_pred EEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 93 ILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 93 vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
|||+||++ ++...|..+++.|++ ||+|+++|+||||.|+.+. ..++.+++++++.+++++++ .++
T Consensus 1 vv~~hG~~--~~~~~~~~~~~~l~~-----~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~------~~~ 67 (228)
T PF12697_consen 1 VVFLHGFG--GSSESWDPLAEALAR-----GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALG------IKK 67 (228)
T ss_dssp EEEE-STT--TTGGGGHHHHHHHHT-----TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTT------TSS
T ss_pred eEEECCCC--CCHHHHHHHHHHHhC-----CCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccc------ccc
Confidence 79999999 999999999999975 9999999999999999654 46889999999999999997 588
Q ss_pred EEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHH
Q 017180 171 LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQ 250 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (376)
++++|||+||.+++.++.++|++|+++|+++|........ . ......++......... .. .....
T Consensus 68 ~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~---~~------~~~~~ 132 (228)
T PF12697_consen 68 VILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSP----S--RSFGPSFIRRLLAWRSR---SL------RRLAS 132 (228)
T ss_dssp EEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHH----C--HHHHHHHHHHHHHHHHH---HH------HHHHH
T ss_pred ccccccccccccccccccccccccccceeecccccccccc----c--ccccchhhhhhhhcccc---cc------ccccc
Confidence 9999999999999999999999999999999853100000 0 00000111111100000 00 00000
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHH
Q 017180 251 SQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAE 330 (376)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~ 330 (376)
..+... ...+........ ....+..+.... ....++...++++ ++|+++++|++|.+++.+.
T Consensus 133 ~~~~~~-------~~~~~~~~~~~~-----~~~~~~~~~~~~----~~~~~~~~~~~~~--~~pvl~i~g~~D~~~~~~~ 194 (228)
T PF12697_consen 133 RFFYRW-------FDGDEPEDLIRS-----SRRALAEYLRSN----LWQADLSEALPRI--KVPVLVIHGEDDPIVPPES 194 (228)
T ss_dssp HHHHHH-------HTHHHHHHHHHH-----HHHHHHHHHHHH----HHHHHHHHHHHGS--SSEEEEEEETTSSSSHHHH
T ss_pred cccccc-------cccccccccccc-----cccccccccccc----ccccccccccccc--CCCeEEeecCCCCCCCHHH
Confidence 000000 011111111100 000001111000 0122356678888 9999999999999999999
Q ss_pred HHHHhcccCCceEEEeCCC-CCCCCCChHHHHHH
Q 017180 331 MEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQE 363 (376)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~ 363 (376)
.+.+.+..+++++++++++ |++++|+|++++++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 195 AEELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred HHHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 9999988899999999998 99999999999864
|
... |
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=205.04 Aligned_cols=246 Identities=13% Similarity=0.146 Sum_probs=156.8
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHHHH-HHHHHhCCCCCCCCC
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKF-VVDLINAPDSPVSSS 167 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~~~-l~~~l~~l~~~~~~~ 167 (376)
|+|||+||++ ++...|..+++.|++ +|+|+++|+||||.|+.+. ..++.++++++ +..+++.++
T Consensus 2 ~~vv~~hG~~--~~~~~~~~~~~~L~~-----~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 68 (251)
T TIGR03695 2 PVLVFLHGFL--GSGADWQALIELLGP-----HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLG------ 68 (251)
T ss_pred CEEEEEcCCC--CchhhHHHHHHHhcc-----cCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcC------
Confidence 6799999999 999999999999985 8999999999999998543 46788888888 777888875
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEK 247 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (376)
.++++++|||+||.+++.+|.++|++|++++++++........ ..... ..........+... ....
T Consensus 69 ~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~--------~~~~~----~~~~~~~~~~~~~~--~~~~ 134 (251)
T TIGR03695 69 IEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEE--------ERAAR----RQNDEQLAQRFEQE--GLEA 134 (251)
T ss_pred CCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchH--------hhhhh----hhcchhhhhHHHhc--CccH
Confidence 6789999999999999999999999999999998742110000 00000 00000000000000 0011
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCC
Q 017180 248 AIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRS 327 (376)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~ 327 (376)
....+.....+......+++.............. ......+...... ........+.++ ++|+++|+|++|..++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~--~~P~l~i~g~~D~~~~ 209 (251)
T TIGR03695 135 FLDDWYQQPLFASQKNLPPEQRQALRAKRLANNP-EGLAKMLRATGLG--KQPSLWPKLQAL--TIPVLYLCGEKDEKFV 209 (251)
T ss_pred HHHHHhcCceeeecccCChHHhHHHHHhcccccc-hHHHHHHHHhhhh--cccchHHHhhCC--CCceEEEeeCcchHHH
Confidence 1111111111111111222222222221111111 1111111110000 011134556778 9999999999998764
Q ss_pred HHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 328 KAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
+..+.+.+..+++++++++++ |++++|+|+++++.|.+||+
T Consensus 210 -~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 210 -QIAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred -HHHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 566778888899999999997 99999999999999999983
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-27 Score=213.45 Aligned_cols=265 Identities=11% Similarity=0.130 Sum_probs=165.1
Q ss_pred eecCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHH
Q 017180 69 KFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNAD 147 (376)
Q Consensus 69 ~~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~ 147 (376)
..+.+|..++|..+.+...+++++|||+||++ ++...|..++..|.+. ||+|+++|+||||.|+... ...+.+
T Consensus 115 ~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~--~~~~~~~~~a~~L~~~----Gy~V~~~D~rGhG~S~~~~~~~~~~~ 188 (395)
T PLN02652 115 FYGARRNALFCRSWAPAAGEMRGILIIIHGLN--EHSGRYLHFAKQLTSC----GFGVYAMDWIGHGGSDGLHGYVPSLD 188 (395)
T ss_pred EECCCCCEEEEEEecCCCCCCceEEEEECCch--HHHHHHHHHHHHHHHC----CCEEEEeCCCCCCCCCCCCCCCcCHH
Confidence 34556778888888764333357899999999 9989999999999876 9999999999999998543 345788
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCC---CCcceEEEeccCCCCCCCcccCCCCchhhhhHH
Q 017180 148 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNL---VKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGL 224 (376)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p---~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (376)
.+.+|+.++++.+.... ...+++++||||||.+++.++. +| ++++++|+.+|..... + . .. ....
T Consensus 189 ~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~-~---~----~~-~~~~ 256 (395)
T PLN02652 189 YVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVK-P---A----HP-IVGA 256 (395)
T ss_pred HHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccc-c---c----hH-HHHH
Confidence 88999999988875221 2357999999999999998765 55 4799999998843100 0 0 00 0000
Q ss_pred HHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCc-hh-HHHhhccCCCCCcHHHH
Q 017180 225 LRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARY-VP-AAFLTGLLDPVNSREEF 302 (376)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~ 302 (376)
.... ...+ . +.. . .............+++..... ...+.... .. ......... ..+.+
T Consensus 257 ~~~l----------~~~~-~-p~~-~-~~~~~~~~~~~s~~~~~~~~~---~~dp~~~~g~i~~~~~~~~~~---~~~~l 316 (395)
T PLN02652 257 VAPI----------FSLV-A-PRF-Q-FKGANKRGIPVSRDPAALLAK---YSDPLVYTGPIRVRTGHEILR---ISSYL 316 (395)
T ss_pred HHHH----------HHHh-C-CCC-c-ccCcccccCCcCCCHHHHHHH---hcCCCcccCCchHHHHHHHHH---HHHHH
Confidence 0000 0000 0 000 0 000000000000011111110 11110000 00 000000000 01113
Q ss_pred HHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc--CCceEEEeCCC-CCCCCC-ChHHHHHHHHHHHHhhcC
Q 017180 303 LQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK--GVTKFVEVPGA-LLPQEE-YPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 303 ~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~-H~~~~e-~pe~~~~~i~~fl~~~~~ 373 (376)
.+.+.++ ++|+|++||++|.+++.+..+.+.+.. +++++++++++ |.++.| .++++.+.|.+||.+..+
T Consensus 317 ~~~L~~I--~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 317 TRNFKSV--TVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HhhcccC--CCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 4556778 999999999999999999999886553 35789999999 998666 799999999999997653
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-26 Score=197.92 Aligned_cols=270 Identities=12% Similarity=0.103 Sum_probs=168.6
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC--CCCCCCCHHH
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD--RPKMDYNADV 148 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~--~~~~~~~~~~ 148 (376)
..+|.+++|..+-...+. ..+||++||++ .+...|..++..|..+ ||.|+++|+||||.|. ......++++
T Consensus 16 ~~d~~~~~~~~~~~~~~~-~g~Vvl~HG~~--Eh~~ry~~la~~l~~~----G~~V~~~D~RGhG~S~r~~rg~~~~f~~ 88 (298)
T COG2267 16 GADGTRLRYRTWAAPEPP-KGVVVLVHGLG--EHSGRYEELADDLAAR----GFDVYALDLRGHGRSPRGQRGHVDSFAD 88 (298)
T ss_pred cCCCceEEEEeecCCCCC-CcEEEEecCch--HHHHHHHHHHHHHHhC----CCEEEEecCCCCCCCCCCCcCCchhHHH
Confidence 445889999888765431 25799999999 9999999999999997 9999999999999996 3334455889
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
+.+|+..+++....+. ...+++++||||||.|++.++.+++..++++||.+|...... ........ .
T Consensus 89 ~~~dl~~~~~~~~~~~--~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~---------~~~~~~~~--~ 155 (298)
T COG2267 89 YVDDLDAFVETIAEPD--PGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG---------AILRLILA--R 155 (298)
T ss_pred HHHHHHHHHHHHhccC--CCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh---------hHHHHHHH--H
Confidence 9999999998875321 368999999999999999999999999999999999642110 00000000 0
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHh-ccCCCc--hhHHHhhccCCCCCcHHHHHHH
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTK-RKGARY--VPAAFLTGLLDPVNSREEFLQL 305 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 305 (376)
................ . . . ......+....+++..+.+..... ..+... ++......... .....
T Consensus 156 ~~~~~~~~~~p~~~~~-~-~---~-~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~------~~~~~ 223 (298)
T COG2267 156 LALKLLGRIRPKLPVD-S-N---L-LEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRV------PALRD 223 (298)
T ss_pred HhcccccccccccccC-c-c---c-ccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcc------cchhc
Confidence 0000000000000000 0 0 0 000000001112222222221111 111111 11111111000 01222
Q ss_pred HhcccCCCcEEEEEeCCCCCCC-HHHHHHHh--cccCCceEEEeCCC-CCCCCCC-h--HHHHHHHHHHHHhhcCC
Q 017180 306 FADLEGKLPLLVVSTEGSPRRS-KAEMEALK--GAKGVTKFVEVPGA-LLPQEEY-P--AMVAQELYQFLQQTFEP 374 (376)
Q Consensus 306 ~~~i~~~~Pvlii~G~~D~~~~-~~~~~~~~--~~~~~~~~~~~~~~-H~~~~e~-p--e~~~~~i~~fl~~~~~~ 374 (376)
...+ ++|+|+++|++|.+++ .+...++. ...+++++++++++ |-++.|. . +++.+.+.+|+.+....
T Consensus 224 ~~~~--~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 224 APAI--ALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALPS 297 (298)
T ss_pred cccc--cCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhccC
Confidence 3445 8999999999999999 56655553 34667899999999 9976664 5 78999999999987643
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-26 Score=238.54 Aligned_cols=270 Identities=16% Similarity=0.191 Sum_probs=167.5
Q ss_pred eecCCcee--EEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-----
Q 017180 69 KFKENSIN--IYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK----- 141 (376)
Q Consensus 69 ~~~~~g~~--l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~----- 141 (376)
+...+|.+ ++|...|..+. +++|||+||++ ++...|..++..|.+ +|+|+++|+||||.|+.+.
T Consensus 1350 ~v~~~~~~~~i~~~~~G~~~~--~~~vVllHG~~--~s~~~w~~~~~~L~~-----~~rVi~~Dl~G~G~S~~~~~~~~~ 1420 (1655)
T PLN02980 1350 RVDVDGFSCLIKVHEVGQNAE--GSVVLFLHGFL--GTGEDWIPIMKAISG-----SARCISIDLPGHGGSKIQNHAKET 1420 (1655)
T ss_pred EEccCceEEEEEEEecCCCCC--CCeEEEECCCC--CCHHHHHHHHHHHhC-----CCEEEEEcCCCCCCCCCccccccc
Confidence 44444543 45666665322 67999999999 999999999999988 7999999999999997432
Q ss_pred ---CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCch
Q 017180 142 ---MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSM 218 (376)
Q Consensus 142 ---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~ 218 (376)
..++++.+++++.+++++++ .++++|+||||||.+++.+|.++|++|+++|++++... .. .
T Consensus 1421 ~~~~~~si~~~a~~l~~ll~~l~------~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~--~~---~----- 1484 (1655)
T PLN02980 1421 QTEPTLSVELVADLLYKLIEHIT------PGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPG--LK---D----- 1484 (1655)
T ss_pred cccccCCHHHHHHHHHHHHHHhC------CCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCc--cC---c-----
Confidence 35789999999999999986 67899999999999999999999999999999986321 00 0
Q ss_pred hhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCc
Q 017180 219 ETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNS 298 (376)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (376)
... ........ ......+... ........++...... .....+...+........ .........+...... .
T Consensus 1485 ~~~-~~~~~~~~-~~~~~~l~~~--g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~--~ 1556 (1655)
T PLN02980 1485 EVA-RKIRSAKD-DSRARMLIDH--GLEIFLENWYSGELWK-SLRNHPHFNKIVASRLLH-KDVPSLAKLLSDLSIG--R 1556 (1655)
T ss_pred hHH-HHHHhhhh-hHHHHHHHhh--hHHHHHHHhccHHHhh-hhccCHHHHHHHHHHHhc-CCHHHHHHHHHHhhhc--c
Confidence 000 00000000 0000000000 0001111111000000 000111111111111111 1111111111111000 1
Q ss_pred HHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCC------------ceEEEeCCC-CCCCCCChHHHHHHHH
Q 017180 299 REEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGV------------TKFVEVPGA-LLPQEEYPAMVAQELY 365 (376)
Q Consensus 299 ~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~------------~~~~~~~~~-H~~~~e~pe~~~~~i~ 365 (376)
..++.+.++++ ++|+|+|+|++|..++ +..+++.+.+++ +++++++++ |++++|+|+++++.|.
T Consensus 1557 ~~dl~~~L~~I--~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~ 1633 (1655)
T PLN02980 1557 QPSLWEDLKQC--DTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALR 1633 (1655)
T ss_pred cchHHHHHhhC--CCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHH
Confidence 11245678888 9999999999999875 555556554443 589999999 9999999999999999
Q ss_pred HHHHhhcCC
Q 017180 366 QFLQQTFEP 374 (376)
Q Consensus 366 ~fl~~~~~~ 374 (376)
+||.+....
T Consensus 1634 ~FL~~~~~~ 1642 (1655)
T PLN02980 1634 KFLTRLHNS 1642 (1655)
T ss_pred HHHHhcccc
Confidence 999987654
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-27 Score=227.97 Aligned_cols=268 Identities=12% Similarity=0.119 Sum_probs=158.4
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVME 150 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~ 150 (376)
+|.+++|...|++. +|+|||+||++ ++...|+.+++.|.+ +|+|+++|+||||.|+.+. ..++.++++
T Consensus 11 ~g~~l~~~~~g~~~---~~~ivllHG~~--~~~~~w~~~~~~L~~-----~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a 80 (582)
T PRK05855 11 DGVRLAVYEWGDPD---RPTVVLVHGYP--DNHEVWDGVAPLLAD-----RFRVVAYDVRGAGRSSAPKRTAAYTLARLA 80 (582)
T ss_pred CCEEEEEEEcCCCC---CCeEEEEcCCC--chHHHHHHHHHHhhc-----ceEEEEecCCCCCCCCCCCcccccCHHHHH
Confidence 48899999998654 78999999999 999999999999976 8999999999999998543 468999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccCCCCCCCcccCCCC---chhhhhHHH
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPTWAGPLPIVFGRDS---SMETRYGLL 225 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~~~~~~~~~~~~~~---~~~~~~~~~ 225 (376)
+|+.+++++++ ..++++|+||||||.+++.++.+ .+.++..++.+++.............. .........
T Consensus 81 ~dl~~~i~~l~-----~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (582)
T PRK05855 81 DDFAAVIDAVS-----PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARAL 155 (582)
T ss_pred HHHHHHHHHhC-----CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHH
Confidence 99999999986 34569999999999999988775 234444444443211000000000000 000000000
Q ss_pred Hhhhc--------cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCC
Q 017180 226 RGTLR--------APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVN 297 (376)
Q Consensus 226 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (376)
..... .+.......... ....+..... .. ...... .................+........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~- 224 (582)
T PRK05855 156 GQLLRSWYIYLFHLPVLPELLWRLG--LGRAWPRLLR-RV----EGTPVD---PIPTQTTLSDGAHGVKLYRANMIRSL- 224 (582)
T ss_pred HHHhhhHHHHHHhCCCCcHHHhccc--hhhHHHHhhh-hc----cCCCcc---hhhhhhhhccccchHHHHHhhhhhhh-
Confidence 00000 000000000000 0000000000 00 000000 00000000000000011100000000
Q ss_pred cHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhhc
Q 017180 298 SREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 298 ~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
.......+ ++|+++|+|++|.+++.+..+.+.+..++.++++++++|+++.|+|+++++.|.+|+.+..
T Consensus 225 ----~~~~~~~~--~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 225 ----SRPRERYT--DVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIKAGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred ----ccCccCCc--cCceEEEEeCCCcccCHHHhccccccCCcceEEEccCCCcchhhChhHHHHHHHHHHHhcc
Confidence 11113346 8999999999999999999998888888888888876699999999999999999998754
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.4e-26 Score=187.03 Aligned_cols=261 Identities=13% Similarity=0.120 Sum_probs=166.8
Q ss_pred ceeEEEEecccCC-CCCCCcEEEecCCCCCccc-hHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHHHH
Q 017180 74 SINIYYEKHERES-PDPSKNILMIPTISDVSTV-EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVME 150 (376)
Q Consensus 74 g~~l~y~~~g~~~-~~~~~~vvllHG~~~~~~~-~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~~ 150 (376)
|.++++..+-+.+ .++...|+++||++ ... ..|..++..|+.. ||.|+++|++|||.|+.-. ..-+++..+
T Consensus 37 G~~lft~~W~p~~~~~pr~lv~~~HG~g--~~~s~~~~~~a~~l~~~----g~~v~a~D~~GhG~SdGl~~yi~~~d~~v 110 (313)
T KOG1455|consen 37 GAKLFTQSWLPLSGTEPRGLVFLCHGYG--EHSSWRYQSTAKRLAKS----GFAVYAIDYEGHGRSDGLHAYVPSFDLVV 110 (313)
T ss_pred CCEeEEEecccCCCCCCceEEEEEcCCc--ccchhhHHHHHHHHHhC----CCeEEEeeccCCCcCCCCcccCCcHHHHH
Confidence 7788887776633 24455788889999 765 7888899999997 9999999999999999433 456788889
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
+|+..+.+....+..-.+.+.+++||||||+|++.++.+.|...+++|+++|...- .+.+ ..
T Consensus 111 ~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i-~~~~-----------------kp 172 (313)
T KOG1455|consen 111 DDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKI-SEDT-----------------KP 172 (313)
T ss_pred HHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeeccccc-CCcc-----------------CC
Confidence 99998887644332335778999999999999999999999999999999984310 0000 00
Q ss_pred cCchhhHHhhhhhccHHHHHHH--HHhcccCCCCCCChHHHHHHHH-HHhccCCCc--hhHHHhhccCCCCCcHHHHHHH
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQ--YKSHVYSNPDNVTPGIVESRYA-LTKRKGARY--VPAAFLTGLLDPVNSREEFLQL 305 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 305 (376)
.+..... ...+ ...+..+ ....-..+...-+++..+.... +....+... ....++. ...++.+.
T Consensus 173 ~p~v~~~-l~~l---~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr-------~~~~le~~ 241 (313)
T KOG1455|consen 173 HPPVISI-LTLL---SKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLR-------VTADLEKN 241 (313)
T ss_pred CcHHHHH-HHHH---HHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHH-------HHHHHHHh
Confidence 0000000 0000 0000000 0000000000011111111111 111111111 1111121 12337778
Q ss_pred HhcccCCCcEEEEEeCCCCCCCHHHHHHHhcc--cCCceEEEeCCC-CCCCC----CChHHHHHHHHHHHHhh
Q 017180 306 FADLEGKLPLLVVSTEGSPRRSKAEMEALKGA--KGVTKFVEVPGA-LLPQE----EYPAMVAQELYQFLQQT 371 (376)
Q Consensus 306 ~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~-H~~~~----e~pe~~~~~i~~fl~~~ 371 (376)
+.++ ++|.+|+||++|.++.++..+.+.+. ..+.++..+||+ |.++. |+-+.+...|.+||++.
T Consensus 242 l~~v--tvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 242 LNEV--TVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cccc--cccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 8888 99999999999999999999998654 457899999999 99775 34467888899999863
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.9e-27 Score=180.18 Aligned_cols=243 Identities=18% Similarity=0.195 Sum_probs=167.4
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK 151 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 151 (376)
.+|.+|+|...|.+ ...|+++.|.-+ +....|.+++..|.+.+ .++|++.|.||||.|.+|......+.+.+
T Consensus 28 vng~ql~y~~~G~G----~~~iLlipGalG-s~~tDf~pql~~l~k~l---~~TivawDPpGYG~SrPP~Rkf~~~ff~~ 99 (277)
T KOG2984|consen 28 VNGTQLGYCKYGHG----PNYILLIPGALG-SYKTDFPPQLLSLFKPL---QVTIVAWDPPGYGTSRPPERKFEVQFFMK 99 (277)
T ss_pred ecCceeeeeecCCC----CceeEecccccc-cccccCCHHHHhcCCCC---ceEEEEECCCCCCCCCCCcccchHHHHHH
Confidence 34889999999986 346888888540 55678988888887752 49999999999999998887777766555
Q ss_pred H---HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 152 F---VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 152 ~---l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
| ..+++++|. .+++.++|+|-||..|+.+|+++++.|.++|+.+...
T Consensus 100 Da~~avdLM~aLk------~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~a------------------------ 149 (277)
T KOG2984|consen 100 DAEYAVDLMEALK------LEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAA------------------------ 149 (277)
T ss_pred hHHHHHHHHHHhC------CCCeeEeeecCCCeEEEEeeccChhhhhhheeecccc------------------------
Confidence 5 457788886 8899999999999999999999999999999886531
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHh--cccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHH
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKS--HVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLF 306 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (376)
.....+...++.+ ++.-+ +..+ ..+. ..+..+.....+....+ +...+.. .-+.. -.+-.+
T Consensus 150 -yvn~~~~ma~kgi---Rdv~k-Ws~r~R~P~e--~~Yg~e~f~~~wa~wvD-----~v~qf~~-~~dG~----fCr~~l 212 (277)
T KOG2984|consen 150 -YVNHLGAMAFKGI---RDVNK-WSARGRQPYE--DHYGPETFRTQWAAWVD-----VVDQFHS-FCDGR----FCRLVL 212 (277)
T ss_pred -eecchhHHHHhch---HHHhh-hhhhhcchHH--HhcCHHHHHHHHHHHHH-----HHHHHhh-cCCCc----hHhhhc
Confidence 0000111111111 01000 0000 0000 01112222211111110 0001111 11111 045578
Q ss_pred hcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 307 ADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 307 ~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
+++ +||+||+||++|++++......+....+.+++.+++.| |..++..+++|++.+.+||++.
T Consensus 213 p~v--kcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 213 PQV--KCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred ccc--cCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 888 99999999999999999999888888899999999999 9999999999999999999875
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-25 Score=197.61 Aligned_cols=115 Identities=15% Similarity=0.163 Sum_probs=94.5
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVME 150 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~ 150 (376)
+|.+++|...|.++ +++|||+||++ ++...+ .+...+... +|+|+++|+||||.|+.+. ..++.++++
T Consensus 13 ~~~~l~y~~~g~~~---~~~lvllHG~~--~~~~~~-~~~~~~~~~----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 82 (306)
T TIGR01249 13 DNHQLYYEQSGNPD---GKPVVFLHGGP--GSGTDP-GCRRFFDPE----TYRIVLFDQRGCGKSTPHACLEENTTWDLV 82 (306)
T ss_pred CCcEEEEEECcCCC---CCEEEEECCCC--CCCCCH-HHHhccCcc----CCEEEEECCCCCCCCCCCCCcccCCHHHHH
Confidence 47889999988654 67899999988 554433 333344333 7999999999999998543 356788999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
+++..++++++ .++++++||||||.+++.++.++|++|+++|++++.
T Consensus 83 ~dl~~l~~~l~------~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (306)
T TIGR01249 83 ADIEKLREKLG------IKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIF 129 (306)
T ss_pred HHHHHHHHHcC------CCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccc
Confidence 99999999986 678999999999999999999999999999999864
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-25 Score=201.48 Aligned_cols=247 Identities=10% Similarity=0.103 Sum_probs=143.9
Q ss_pred CCcEEEecCCCCCccch--HhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVE--EWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~--~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
+|+||++||++ ++.. .+..++..+.+. ||+|+++|+||||.|+.....+....+.+|+.+++++++... .
T Consensus 100 ~p~vvllHG~~--g~s~~~y~~~~~~~~~~~----g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~ 171 (388)
T PLN02511 100 APVLILLPGLT--GGSDDSYVRHMLLRARSK----GWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRY--P 171 (388)
T ss_pred CCEEEEECCCC--CCCCCHHHHHHHHHHHHC----CCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHC--C
Confidence 67899999997 4432 335566655554 999999999999999854333334566778888887775322 2
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCC--cceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhcc
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVK--PTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSN 245 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~--v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (376)
..+++++||||||.+++.++.++|++ |.+++++++.+.. . .....+...+. ......+...+
T Consensus 172 ~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l--~----------~~~~~~~~~~~-~~y~~~~~~~l--- 235 (388)
T PLN02511 172 SANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDL--V----------IADEDFHKGFN-NVYDKALAKAL--- 235 (388)
T ss_pred CCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCH--H----------HHHHHHhccHH-HHHHHHHHHHH---
Confidence 46899999999999999999999987 8888888763210 0 00000000000 00000000000
Q ss_pred HHHHHHHHHhcccCC-CCCCChHH------HHHHHHHHhccC-CCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEE
Q 017180 246 EKAIQSQYKSHVYSN-PDNVTPGI------VESRYALTKRKG-ARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLV 317 (376)
Q Consensus 246 ~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvli 317 (376)
...+.. . ...+.. ...++... +..+.+...... .......++.. ......+++| ++|+|+
T Consensus 236 ~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~--------~s~~~~L~~I--~vPtLi 303 (388)
T PLN02511 236 RKIFAK-H-ALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSN--------SSSSDSIKHV--RVPLLC 303 (388)
T ss_pred HHHHHH-H-HHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHH--------cCchhhhccC--CCCeEE
Confidence 000000 0 000000 00011110 001111111110 00000111100 0023467788 999999
Q ss_pred EEeCCCCCCCHHHH-HHHhcccCCceEEEeCCC-CCCCCCChHH------HHHHHHHHHHhhc
Q 017180 318 VSTEGSPRRSKAEM-EALKGAKGVTKFVEVPGA-LLPQEEYPAM------VAQELYQFLQQTF 372 (376)
Q Consensus 318 i~G~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~-H~~~~e~pe~------~~~~i~~fl~~~~ 372 (376)
|+|++|++++.+.. ..+.+..++++++++++| |+.++|.|+. +.+.|.+||....
T Consensus 304 I~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 304 IQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred EEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHH
Confidence 99999999987654 345677899999999998 9999999976 4899999998753
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-24 Score=191.47 Aligned_cols=263 Identities=9% Similarity=0.046 Sum_probs=152.1
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccch-Hh-------------------------HHHHHHHHhhhCCcceEE
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVE-EW-------------------------RLVAQDIVQRVGKVNWRA 126 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~-~~-------------------------~~~~~~L~~~~~~~~~~V 126 (376)
+|.+|++..+...++ +.+||++||++ .+.. .+ ..+++.|.++ ||+|
T Consensus 6 ~g~~l~~~~~~~~~~--kg~v~i~HG~~--eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~----G~~V 77 (332)
T TIGR01607 6 DGLLLKTYSWIVKNA--IGIIVLIHGLK--SHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKN----GYSV 77 (332)
T ss_pred CCCeEEEeeeeccCC--eEEEEEECCCc--hhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHC----CCcE
Confidence 578888887765433 56899999999 7664 21 3568888886 9999
Q ss_pred EEeCCCCCcCCCCCC----CCCCHHHHHHHHHHHHhCCCCC------------------CCCCCCcEEEEecchHHHHHH
Q 017180 127 TIVDWPGLGYSDRPK----MDYNADVMEKFVVDLINAPDSP------------------VSSSESDLVIFGGGHAATLTV 184 (376)
Q Consensus 127 i~~D~~G~G~S~~~~----~~~~~~~~~~~l~~~l~~l~~~------------------~~~~~~~~~lvG~S~Gg~ia~ 184 (376)
+++|+||||+|+... ...+.+++++|+.++++.+... ......|++|+||||||.+++
T Consensus 78 ~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~ 157 (332)
T TIGR01607 78 YGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIAL 157 (332)
T ss_pred EEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHH
Confidence 999999999998431 1247888999999988765320 000146899999999999999
Q ss_pred HHHHhCCC--------CcceEEEeccCCCCCCCcccCCCCchhh-hhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHh
Q 017180 185 RAAKKNLV--------KPTAIAAVAPTWAGPLPIVFGRDSSMET-RYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKS 255 (376)
Q Consensus 185 ~~a~~~p~--------~v~~lvl~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (376)
.++.++++ .++++|+++|.+.-........ ..... ....+.. +..+...
T Consensus 158 ~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~-~~~~~~~~~l~~~---------------------~~~~~p~ 215 (332)
T TIGR01607 158 RLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDS-FKFKYFYLPVMNF---------------------MSRVFPT 215 (332)
T ss_pred HHHHHhccccccccccccceEEEeccceEEecccCCCc-chhhhhHHHHHHH---------------------HHHHCCc
Confidence 99876542 5889999988531100000000 00000 0000000 0000000
Q ss_pred cccCC--CCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHH
Q 017180 256 HVYSN--PDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEA 333 (376)
Q Consensus 256 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~ 333 (376)
..... .....+...+.+.......... ....+...... ..+.+...+..+..++|+|+|+|++|.+++.+..+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~Dp~~~~~~-~s~~~~~~l~~---~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~ 291 (332)
T TIGR01607 216 FRISKKIRYEKSPYVNDIIKFDKFRYDGG-ITFNLASELIK---ATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVS 291 (332)
T ss_pred ccccCccccccChhhhhHHhcCccccCCc-ccHHHHHHHHH---HHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHH
Confidence 00000 0001111111111100000000 00111111000 001122233334225899999999999999988888
Q ss_pred Hhcc--cCCceEEEeCCC-CCCCCCC-hHHHHHHHHHHHH
Q 017180 334 LKGA--KGVTKFVEVPGA-LLPQEEY-PAMVAQELYQFLQ 369 (376)
Q Consensus 334 ~~~~--~~~~~~~~~~~~-H~~~~e~-pe~~~~~i~~fl~ 369 (376)
+.+. .+++++++++++ |.++.|. ++++.+.|.+||.
T Consensus 292 ~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 292 FYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred HHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 7643 357899999999 9988875 7899999999985
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-23 Score=186.37 Aligned_cols=274 Identities=12% Similarity=0.051 Sum_probs=163.6
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccch-------------HhHHHHHH---HHhhhCCcceEEEEeCCCCCcCC
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVE-------------EWRLVAQD---IVQRVGKVNWRATIVDWPGLGYS 137 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~-------------~~~~~~~~---L~~~~~~~~~~Vi~~D~~G~G~S 137 (376)
.++|+|+.+|.-++.....||++|++. ++.. -|..++.. |.- ..|.||++|..|-|.|
T Consensus 40 ~~~~~Y~t~G~ln~~~~n~vlv~h~~t--g~~h~~~~~~~~~~~~gww~~~iG~g~~lDt----~~yfvi~~n~lG~~~~ 113 (389)
T PRK06765 40 DVQMGYETYGTLNRAKSNVILITHYFS--ATSHAAGKYTADDEESGYWDGLIGPGKAIDT----NKYFVISTDTLCNVQV 113 (389)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCCC--CchhhcccccccCCCcccHHhccCCCCCcCC----CceEEEEecccCCCcC
Confidence 568999999986654456788889998 5331 25444421 222 2699999999998763
Q ss_pred CC------------CC---------CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEE-EEecchHHHHHHHHHHhCCCCcc
Q 017180 138 DR------------PK---------MDYNADVMEKFVVDLINAPDSPVSSSESDLV-IFGGGHAATLTVRAAKKNLVKPT 195 (376)
Q Consensus 138 ~~------------~~---------~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-lvG~S~Gg~ia~~~a~~~p~~v~ 195 (376)
+. |. ..++++++++++.+++++++ .++++ ++||||||++++.+|.++|++|+
T Consensus 114 ~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lg------i~~~~~vvG~SmGG~ial~~a~~~P~~v~ 187 (389)
T PRK06765 114 KDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLG------IARLHAVMGPSMGGMQAQEWAVHYPHMVE 187 (389)
T ss_pred CCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcC------CCCceEEEEECHHHHHHHHHHHHChHhhh
Confidence 21 11 24899999999999999997 67775 99999999999999999999999
Q ss_pred eEEEeccCCCCCCCcccCCCCchh--hhhH-HHHhhhccCc-------------hhhHHhh----hhhccHHHHHHHHHh
Q 017180 196 AIAAVAPTWAGPLPIVFGRDSSME--TRYG-LLRGTLRAPG-------------VGWMMYN----MLVSNEKAIQSQYKS 255 (376)
Q Consensus 196 ~lvl~~p~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~-------------~~~~~~~----~~~~~~~~~~~~~~~ 255 (376)
++|+++..... ..+. .... +...+...+. .+..... ........+...+.+
T Consensus 188 ~lv~ia~~~~~---------~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r 258 (389)
T PRK06765 188 RMIGVIGNPQN---------DAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPR 258 (389)
T ss_pred eEEEEecCCCC---------ChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCc
Confidence 99999764211 0010 0111 1111111111 0000000 000011121111111
Q ss_pred cccCCCC----CCChHHHHHHHHH----HhccCCCchhHHHhhc--cCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCC
Q 017180 256 HVYSNPD----NVTPGIVESRYAL----TKRKGARYVPAAFLTG--LLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPR 325 (376)
Q Consensus 256 ~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~ 325 (376)
....... ......++.+... .....-...+...... ..+......++.+.+.++ ++|+|+|+|++|.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I--~~PtLvI~G~~D~l 336 (389)
T PRK06765 259 NASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNI--EANVLMIPCKQDLL 336 (389)
T ss_pred CccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcC--CCCEEEEEeCCCCC
Confidence 1000000 0001112222211 1111111111111111 111100111367788889 99999999999999
Q ss_pred CCHHHHHHHhcccC----CceEEEeCC-C-CCCCCCChHHHHHHHHHHHHh
Q 017180 326 RSKAEMEALKGAKG----VTKFVEVPG-A-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 326 ~~~~~~~~~~~~~~----~~~~~~~~~-~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+|.+..+.+.+..+ +++++++++ + |++++|+|+++++.|.+||++
T Consensus 337 ~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 337 QPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 99998888877664 689999985 6 999999999999999999975
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-22 Score=184.68 Aligned_cols=218 Identities=15% Similarity=0.204 Sum_probs=140.3
Q ss_pred CCcEEEecCCCCCccc-hHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTV-EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~-~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|+||++||++ +.. ..|..++..|.++ ||+|+++|+||||.|.............+.+.+++.... .+..
T Consensus 194 ~P~Vli~gG~~--~~~~~~~~~~~~~La~~----Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~---~vd~ 264 (414)
T PRK05077 194 FPTVLVCGGLD--SLQTDYYRLFRDYLAPR----GIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVP---WVDH 264 (414)
T ss_pred ccEEEEeCCcc--cchhhhHHHHHHHHHhC----CCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCc---ccCc
Confidence 55666666666 543 5788888899887 999999999999999743223334444455656665542 1235
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHH
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKA 248 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (376)
.++.++||||||.+++.+|..+|++++++|+++|.... .+.. . .. ...+ +..
T Consensus 265 ~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~----~~~~----~---~~--------------~~~~---p~~ 316 (414)
T PRK05077 265 TRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHT----LLTD----P---KR--------------QQQV---PEM 316 (414)
T ss_pred ccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccch----hhcc----h---hh--------------hhhc---hHH
Confidence 78999999999999999999999999999999874211 0000 0 00 0000 000
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHH-hcccCCCcEEEEEeCCCCCCC
Q 017180 249 IQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLF-ADLEGKLPLLVVSTEGSPRRS 327 (376)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~Pvlii~G~~D~~~~ 327 (376)
....+... .... ..+.+.+... +..+.. . ....+ +++ ++|+|+|+|++|+++|
T Consensus 317 ~~~~la~~-lg~~-~~~~~~l~~~----------------l~~~sl---~---~~~~l~~~i--~~PvLiI~G~~D~ivP 370 (414)
T PRK05077 317 YLDVLASR-LGMH-DASDEALRVE----------------LNRYSL---K---VQGLLGRRC--PTPMLSGYWKNDPFSP 370 (414)
T ss_pred HHHHHHHH-hCCC-CCChHHHHHH----------------hhhccc---h---hhhhhccCC--CCcEEEEecCCCCCCC
Confidence 01011110 0000 1111111100 000000 0 01112 457 8999999999999999
Q ss_pred HHHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhhc
Q 017180 328 KAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
.+..+.+.+..++.++++++++ ++++.++++.+.|.+||.+.+
T Consensus 371 ~~~a~~l~~~~~~~~l~~i~~~--~~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 371 EEDSRLIASSSADGKLLEIPFK--PVYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred HHHHHHHHHhCCCCeEEEccCC--CccCCHHHHHHHHHHHHHHHh
Confidence 9999998888899999999997 456799999999999998764
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.2e-23 Score=172.30 Aligned_cols=249 Identities=12% Similarity=0.097 Sum_probs=161.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
.|+++++||+. ++...|+.+...|++.+ +..|+++|.|-||.|... ..++.+.+++|+..||+..+... ...
T Consensus 52 ~Pp~i~lHGl~--GS~~Nw~sv~k~Ls~~l---~~~v~~vd~RnHG~Sp~~-~~h~~~~ma~dv~~Fi~~v~~~~--~~~ 123 (315)
T KOG2382|consen 52 APPAIILHGLL--GSKENWRSVAKNLSRKL---GRDVYAVDVRNHGSSPKI-TVHNYEAMAEDVKLFIDGVGGST--RLD 123 (315)
T ss_pred CCceEEecccc--cCCCCHHHHHHHhcccc---cCceEEEecccCCCCccc-cccCHHHHHHHHHHHHHHccccc--ccC
Confidence 78999999999 99999999999999864 579999999999999854 45668999999999999985221 257
Q ss_pred cEEEEecchHH-HHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCch-------h---hHH
Q 017180 170 DLVIFGGGHAA-TLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGV-------G---WMM 238 (376)
Q Consensus 170 ~~~lvG~S~Gg-~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~ 238 (376)
+++++|||||| .+++..+...|+.+.++|+++-+.. ..+. ........+..+...... . +.+
T Consensus 124 ~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~-~~~~------~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l 196 (315)
T KOG2382|consen 124 PVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPG-GVGR------SYGEYRELIKAMIQLDLSIGVSRGRKEALKSL 196 (315)
T ss_pred CceecccCcchHHHHHHHHHhcCcccceeEEEecCCc-cCCc------ccchHHHHHHHHHhccccccccccHHHHHHHH
Confidence 89999999999 7777778899999999999864321 1111 111222333333322211 0 001
Q ss_pred hhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHH--hcccCCCcEE
Q 017180 239 YNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLF--ADLEGKLPLL 316 (376)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~Pvl 316 (376)
.... .+..+..++....-..... ... .-.........++..+... .++..+ ... ..||+
T Consensus 197 ~~~~--~d~~~~~fi~~nl~~~~~~--~s~--------~w~~nl~~i~~~~~~~~~~-----s~~~~l~~~~~--~~pvl 257 (315)
T KOG2382|consen 197 IEVG--FDNLVRQFILTNLKKSPSD--GSF--------LWRVNLDSIASLLDEYEIL-----SYWADLEDGPY--TGPVL 257 (315)
T ss_pred HHHh--cchHHHHHHHHhcCcCCCC--Cce--------EEEeCHHHHHHHHHHHHhh-----ccccccccccc--cccee
Confidence 1100 0111221222111100000 000 0000000111111110000 011112 333 78999
Q ss_pred EEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 317 VVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 317 ii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
+++|.++..++.+...++.+.+|++++++++++ |++|.|+|+++.+.|.+|+.+..
T Consensus 258 fi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 258 FIKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred EEecCCCCCcChhHHHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 999999999999999999999999999999977 99999999999999999998653
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.2e-23 Score=162.00 Aligned_cols=223 Identities=10% Similarity=0.118 Sum_probs=151.6
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+..||||||+. ++....+.+...|.+. ||.|.+|.+||||.....-...+.++|-+++.+..+.|... .-+
T Consensus 15 ~~AVLllHGFT--Gt~~Dvr~Lgr~L~e~----GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~---gy~ 85 (243)
T COG1647 15 NRAVLLLHGFT--GTPRDVRMLGRYLNEN----GYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA---GYD 85 (243)
T ss_pred CEEEEEEeccC--CCcHHHHHHHHHHHHC----CceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc---CCC
Confidence 34699999999 9999999999999997 99999999999998764445788899988887666555311 267
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHH
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAI 249 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (376)
.|.++|.||||.+++.+|.++| ++++|.++++... .....+ . ...+
T Consensus 86 eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~----------------------k~~~~i----i------e~~l 131 (243)
T COG1647 86 EIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNV----------------------KSWRII----I------EGLL 131 (243)
T ss_pred eEEEEeecchhHHHHHHHhhCC--ccceeeecCCccc----------------------ccchhh----h------HHHH
Confidence 8999999999999999999998 6799988874210 000000 0 0111
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHHHhccCC--CchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCC
Q 017180 250 QSQYKSHVYSNPDNVTPGIVESRYALTKRKGA--RYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRS 327 (376)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~ 327 (376)
+.+-...-+ ...+++..+..+........ ...+..+ .......+..| ..|++++.|.+|+.++
T Consensus 132 ~y~~~~kk~---e~k~~e~~~~e~~~~~~~~~~~~~~~~~~----------i~~~~~~~~~I--~~pt~vvq~~~D~mv~ 196 (243)
T COG1647 132 EYFRNAKKY---EGKDQEQIDKEMKSYKDTPMTTTAQLKKL----------IKDARRSLDKI--YSPTLVVQGRQDEMVP 196 (243)
T ss_pred HHHHHhhhc---cCCCHHHHHHHHHHhhcchHHHHHHHHHH----------HHHHHhhhhhc--ccchhheecccCCCCC
Confidence 100000000 12233333333322221100 0000111 11245567777 9999999999999999
Q ss_pred HHHHHHHhcc--cCCceEEEeCCC-CCC-CCCChHHHHHHHHHHHHh
Q 017180 328 KAEMEALKGA--KGVTKFVEVPGA-LLP-QEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 328 ~~~~~~~~~~--~~~~~~~~~~~~-H~~-~~e~pe~~~~~i~~fl~~ 370 (376)
.+.++.+... ..+.++.+++++ |.+ +.+..|.+.+.|..||++
T Consensus 197 ~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 197 AESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 9999988654 346789999999 995 555689999999999974
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.5e-22 Score=169.24 Aligned_cols=221 Identities=11% Similarity=0.132 Sum_probs=133.0
Q ss_pred ceeEEEEecccC--CCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC-cCCCCCCCCCCHHHHH
Q 017180 74 SINIYYEKHERE--SPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-GYSDRPKMDYNADVME 150 (376)
Q Consensus 74 g~~l~y~~~g~~--~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~-G~S~~~~~~~~~~~~~ 150 (376)
|.+|+-+..-++ ..++.++||+.||++ .....+..++..|.++ ||.|+.+|.||| |+|+......+.....
T Consensus 19 G~~L~Gwl~~P~~~~~~~~~~vIi~HGf~--~~~~~~~~~A~~La~~----G~~vLrfD~rg~~GeS~G~~~~~t~s~g~ 92 (307)
T PRK13604 19 GQSIRVWETLPKENSPKKNNTILIASGFA--RRMDHFAGLAEYLSSN----GFHVIRYDSLHHVGLSSGTIDEFTMSIGK 92 (307)
T ss_pred CCEEEEEEEcCcccCCCCCCEEEEeCCCC--CChHHHHHHHHHHHHC----CCEEEEecCCCCCCCCCCccccCcccccH
Confidence 556654444332 223357899999999 8777799999999997 999999999988 9997544344444456
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
+|+..+++.+... ...++.|+||||||.+++..|... .++.+|+.+|... ....++..+.
T Consensus 93 ~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~---------------l~d~l~~~~~ 152 (307)
T PRK13604 93 NSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVN---------------LRDTLERALG 152 (307)
T ss_pred HHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCccc---------------HHHHHHHhhh
Confidence 6776555555321 256799999999999997777643 3889999998420 0000000000
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhcc--CCCCCcHHHHHHHHhc
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGL--LDPVNSREEFLQLFAD 308 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 308 (376)
. .+...... ... +.++ ..+.......|+... .+.. ......+.+++
T Consensus 153 ~--------------------~~~~~p~~---~lp-~~~d-------~~g~~l~~~~f~~~~~~~~~~-~~~s~i~~~~~ 200 (307)
T PRK13604 153 Y--------------------DYLSLPID---ELP-EDLD-------FEGHNLGSEVFVTDCFKHGWD-TLDSTINKMKG 200 (307)
T ss_pred c--------------------ccccCccc---ccc-cccc-------cccccccHHHHHHHHHhcCcc-ccccHHHHHhh
Confidence 0 00000000 000 0000 000000000011000 0000 01113445667
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhccc--CCceEEEeCCC-CCCCC
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKGAK--GVTKFVEVPGA-LLPQE 354 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~-H~~~~ 354 (376)
+ ++|+|+|||++|.++|.+..+.+.+.. .+++++.++|+ |...+
T Consensus 201 l--~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 201 L--DIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred c--CCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCc
Confidence 7 899999999999999999999887654 47999999999 98654
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.8e-22 Score=176.37 Aligned_cols=247 Identities=10% Similarity=0.069 Sum_probs=139.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCC---CHHHHHHHHHHHHhCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDY---NADVMEKFVVDLINAPDSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~---~~~~~~~~l~~~l~~l~~~~~ 165 (376)
+|+||++||+++......+..++..|.++ ||+|+++|+||||.|... ...+ ..++..+.+..+.++++
T Consensus 58 ~p~vll~HG~~g~~~~~~~~~~~~~l~~~----G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~---- 129 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYAHGLLEAAQKR----GWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFG---- 129 (324)
T ss_pred CCEEEEeCCCCCCCcCHHHHHHHHHHHHC----CCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCC----
Confidence 67899999998322233456788888886 999999999999987532 1222 22333333333333343
Q ss_pred CCCCcEEEEecchHHHHHHHHHHhCCCC--cceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhh
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKKNLVK--PTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLV 243 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~~p~~--v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (376)
..+++++||||||.+++.++.++++. +.++|++++.... ......+..... ......+...+
T Consensus 130 --~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~------------~~~~~~~~~~~~-~~~~~~l~~~l- 193 (324)
T PRK10985 130 --HVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLML------------EACSYRMEQGFS-RVYQRYLLNLL- 193 (324)
T ss_pred --CCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCH------------HHHHHHHhhhHH-HHHHHHHHHHH-
Confidence 56899999999999988888876544 8888888874310 000000000000 00111111111
Q ss_pred ccHHHHHHHHHhcccCCCCCCChHHHHH------HHHHHhcc-CCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEE
Q 017180 244 SNEKAIQSQYKSHVYSNPDNVTPGIVES------RYALTKRK-GARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLL 316 (376)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvl 316 (376)
...+...... +......+.+.+.. +.+....+ ........++.. . ...+.++++ ++|++
T Consensus 194 --~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~---~-----~~~~~l~~i--~~P~l 259 (324)
T PRK10985 194 --KANAARKLAA--YPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQ---C-----SALPLLNQI--RKPTL 259 (324)
T ss_pred --HHHHHHHHHh--ccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHH---C-----ChHHHHhCC--CCCEE
Confidence 0111111111 11111112221111 11111111 111111111111 0 134567788 99999
Q ss_pred EEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCCh-----HHHHHHHHHHHHhhcCC
Q 017180 317 VVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYP-----AMVAQELYQFLQQTFEP 374 (376)
Q Consensus 317 ii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~p-----e~~~~~i~~fl~~~~~~ 374 (376)
+|+|++|++++.+..+.+.+..+++++++++++ |+.++|.. -..-+.+.+|+....++
T Consensus 260 ii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~~~ 323 (324)
T PRK10985 260 IIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYLEA 323 (324)
T ss_pred EEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhhcC
Confidence 999999999998888877777889999999998 99888742 34577788888776543
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-21 Score=168.20 Aligned_cols=234 Identities=15% Similarity=0.169 Sum_probs=138.1
Q ss_pred CCcEEEecCCCCC--ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDV--STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~--~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
+++||++||++.. ++...|..+++.|+++ ||+|+++|+||||.|+.. ..+.+++.+|+.++++.+.... ..
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~----G~~v~~~Dl~G~G~S~~~--~~~~~~~~~d~~~~~~~l~~~~-~g 98 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEA----GFPVLRFDYRGMGDSEGE--NLGFEGIDADIAAAIDAFREAA-PH 98 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHC----CCEEEEeCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHhhC-CC
Confidence 5678888876521 2334567788899886 999999999999999743 2466777888888877763111 01
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEK 247 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (376)
.++++++||||||.+++.+|.. +.+|+++|+++|.....-. ... ..+. ........+ ..
T Consensus 99 ~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~-------~~~---~~~~---------~~~~~~~~~-~~ 157 (274)
T TIGR03100 99 LRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAA-------QAA---SRIR---------HYYLGQLLS-AD 157 (274)
T ss_pred CCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCccc-------chH---HHHH---------HHHHHHHhC-hH
Confidence 3679999999999999999865 4689999999984211000 000 0000 000100000 11
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHH--h-ccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCC
Q 017180 248 AIQSQYKSHVYSNPDNVTPGIVESRYALT--K-RKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSP 324 (376)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~ 324 (376)
..+..+ .....+ .+....+.... . ......... ....++...+.++ ++|+++++|++|.
T Consensus 158 ~~~~~~-----~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~--~~P~ll~~g~~D~ 219 (274)
T TIGR03100 158 FWRKLL-----SGEVNL-GSSLRGLGDALLKARQKGDEVAHG----------GLAERMKAGLERF--QGPVLFILSGNDL 219 (274)
T ss_pred HHHHhc-----CCCccH-HHHHHHHHHHHHhhhhcCCCcccc----------hHHHHHHHHHHhc--CCcEEEEEcCcch
Confidence 111000 000001 11111111100 0 000000000 0123355667788 9999999999998
Q ss_pred CCCHHHH------HHHhccc--CCceEEEeCCC-CCCC-CCChHHHHHHHHHHHHh
Q 017180 325 RRSKAEM------EALKGAK--GVTKFVEVPGA-LLPQ-EEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 325 ~~~~~~~------~~~~~~~--~~~~~~~~~~~-H~~~-~e~pe~~~~~i~~fl~~ 370 (376)
..+ +.. ..+.+.. ++++++.++++ |++. .+.++++.+.|.+||++
T Consensus 220 ~~~-~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 220 TAQ-EFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred hHH-HHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 764 332 3344433 78999999999 9984 45569999999999963
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-20 Score=154.01 Aligned_cols=185 Identities=10% Similarity=0.072 Sum_probs=122.5
Q ss_pred CcEEEecCCCCCccchHhHH--HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 91 KNILMIPTISDVSTVEEWRL--VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~--~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
|+|||+||++ ++...|.. +...+.+... +|+|+++|+|||| +++++++.+++++++ .
T Consensus 2 p~illlHGf~--ss~~~~~~~~~~~~l~~~~~--~~~v~~~dl~g~~-----------~~~~~~l~~l~~~~~------~ 60 (190)
T PRK11071 2 STLLYLHGFN--SSPRSAKATLLKNWLAQHHP--DIEMIVPQLPPYP-----------ADAAELLESLVLEHG------G 60 (190)
T ss_pred CeEEEECCCC--CCcchHHHHHHHHHHHHhCC--CCeEEeCCCCCCH-----------HHHHHHHHHHHHHcC------C
Confidence 4799999999 88888874 3455554211 6999999999985 467889999999986 6
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHH
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKA 248 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (376)
++++++||||||.+++.+|.++|. ++|+++|... + ...+......
T Consensus 61 ~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~---~------------~~~~~~~~~~----------------- 105 (190)
T PRK11071 61 DPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVR---P------------FELLTDYLGE----------------- 105 (190)
T ss_pred CCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCC---H------------HHHHHHhcCC-----------------
Confidence 789999999999999999999883 4688888320 0 0000000000
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCH
Q 017180 249 IQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSK 328 (376)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~ 328 (376)
...........++.+.++..... + +.+ +. . .+|+++|+|++|.++|.
T Consensus 106 ----~~~~~~~~~~~~~~~~~~d~~~~------------------~-------~~~-i~-~--~~~v~iihg~~De~V~~ 152 (190)
T PRK11071 106 ----NENPYTGQQYVLESRHIYDLKVM------------------Q-------IDP-LE-S--PDLIWLLQQTGDEVLDY 152 (190)
T ss_pred ----cccccCCCcEEEcHHHHHHHHhc------------------C-------Ccc-CC-C--hhhEEEEEeCCCCcCCH
Confidence 00000000001111111111000 0 111 11 3 77999999999999999
Q ss_pred HHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 329 AEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
+...++.+. ++.+.+++| |.. ...+++.+.|.+|+.
T Consensus 153 ~~a~~~~~~---~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 153 RQAVAYYAA---CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred HHHHHHHHh---cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 999988774 467788999 986 444889999999975
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-19 Score=155.95 Aligned_cols=220 Identities=14% Similarity=0.069 Sum_probs=126.9
Q ss_pred EEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHH-------HH
Q 017180 77 IYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNAD-------VM 149 (376)
Q Consensus 77 l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~-------~~ 149 (376)
++|...+..+ ++.|+||++||++ ++...|..++..|.++ ||+|+++|+||||.+.......... ..
T Consensus 15 ~~~~p~~~~~-~~~p~vv~~HG~~--~~~~~~~~~~~~l~~~----G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~ 87 (249)
T PRK10566 15 LHAFPAGQRD-TPLPTVFFYHGFT--SSKLVYSYFAVALAQA----GFRVIMPDAPMHGARFSGDEARRLNHFWQILLQN 87 (249)
T ss_pred EEEcCCCCCC-CCCCEEEEeCCCC--cccchHHHHHHHHHhC----CCEEEEecCCcccccCCCccccchhhHHHHHHHH
Confidence 4555544321 1267999999999 8888899999999886 9999999999999864221111111 11
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhh
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (376)
.+++.++++.+........++++++|||+||.+++.++.++|+....++++.+.+ ...... ..
T Consensus 88 ~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~----------------~~~~~~-~~ 150 (249)
T PRK10566 88 MQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGY----------------FTSLAR-TL 150 (249)
T ss_pred HHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHH----------------HHHHHH-Hh
Confidence 2333333333221111235789999999999999999998886433334433210 000000 00
Q ss_pred ccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcc
Q 017180 230 RAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADL 309 (376)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 309 (376)
+....... .........+..... .. + ....+.++
T Consensus 151 -----------------------~~~~~~~~--~~~~~~~~~~~~~~~----------------~~--~---~~~~~~~i 184 (249)
T PRK10566 151 -----------------------FPPLIPET--AAQQAEFNNIVAPLA----------------EW--E---VTHQLEQL 184 (249)
T ss_pred -----------------------cccccccc--cccHHHHHHHHHHHh----------------hc--C---hhhhhhhc
Confidence 00000000 000000000000000 00 0 11223343
Q ss_pred cCCCcEEEEEeCCCCCCCHHHHHHHhcccC------CceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 310 EGKLPLLVVSTEGSPRRSKAEMEALKGAKG------VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 310 ~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~------~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
. ++|+|+++|++|.+++.+..+.+.+..+ +++++.++++ |... + +..+.+.+||++.
T Consensus 185 ~-~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~~ 248 (249)
T PRK10566 185 A-DRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQH 248 (249)
T ss_pred C-CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---H-HHHHHHHHHHHhh
Confidence 1 5899999999999999998888765432 3677889998 9853 4 4678889999875
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-21 Score=166.79 Aligned_cols=222 Identities=15% Similarity=0.147 Sum_probs=131.0
Q ss_pred eEEEEeCCCCCcCCCC---C-CCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEE
Q 017180 124 WRATIVDWPGLGYSDR---P-KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAA 199 (376)
Q Consensus 124 ~~Vi~~D~~G~G~S~~---~-~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl 199 (376)
|+|+++|+||+|.|++ . ...++.+++++++..++++++ .++++++||||||.+++.+|.++|++|+++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALG------IKKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHT------TSSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhC------CCCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 7999999999999994 2 468999999999999999997 67799999999999999999999999999999
Q ss_pred eccCCCCCCCcccCCCCchhhhhH-HHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHH-HHHHh
Q 017180 200 VAPTWAGPLPIVFGRDSSMETRYG-LLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESR-YALTK 277 (376)
Q Consensus 200 ~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 277 (376)
+++.. ..+..... ..... ............ ...... ......... ...........+..... .....
T Consensus 75 ~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 143 (230)
T PF00561_consen 75 ISPPP--DLPDGLWN----RIWPRGNLQGQLLDNFFN-FLSDPI---KPLLGRWPK-QFFAYDREFVEDFLKQFQSQQYA 143 (230)
T ss_dssp ESESS--HHHHHHHH----HCHHHHHHHHHHHHHHHH-HHHHHH---HHHHHHHHH-HHHHHHHHHHHTHHHHHHHHHHH
T ss_pred Eeeec--cchhhhhH----HHHhhhhhhhhHHHhhhc-cccccc---hhhhhhhhh-heeeccCccccchhhccchhhhh
Confidence 98731 00000000 00000 000000000000 000000 000000000 00000000000000000 00000
Q ss_pred ccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCC
Q 017180 278 RKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEY 356 (376)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~ 356 (376)
.............. .............+.++ ++|+++++|++|.++|.+....+.+..|+.++++++++ |+.+++.
T Consensus 144 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~i--~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~ 220 (230)
T PF00561_consen 144 RFAETDAFDNMFWN-ALGYFSVWDPSPALSNI--KVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEG 220 (230)
T ss_dssp HTCHHHHHHHHHHH-HHHHHHHHHHHHHHTTT--TSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHS
T ss_pred HHHHHHHHhhhccc-ccccccccccccccccc--CCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcC
Confidence 00000000000000 00000122245566778 99999999999999999999999999999999999997 9999999
Q ss_pred hHHHHHHHH
Q 017180 357 PAMVAQELY 365 (376)
Q Consensus 357 pe~~~~~i~ 365 (376)
|+++++.|.
T Consensus 221 ~~~~~~~i~ 229 (230)
T PF00561_consen 221 PDEFNEIII 229 (230)
T ss_dssp HHHHHHHHH
T ss_pred HHhhhhhhc
Confidence 999999875
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-20 Score=153.80 Aligned_cols=104 Identities=13% Similarity=0.209 Sum_probs=88.2
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+|.++|+||.| .+...|..++..|.... ..+|+++|+||||+|. .+..+.+.+.++.|+.++++++-.. ..
T Consensus 74 gpil~l~HG~G--~S~LSfA~~a~el~s~~---~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge---~~ 145 (343)
T KOG2564|consen 74 GPILLLLHGGG--SSALSFAIFASELKSKI---RCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGE---LP 145 (343)
T ss_pred ccEEEEeecCc--ccchhHHHHHHHHHhhc---ceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhcc---CC
Confidence 88889999999 99999999999998752 5889999999999998 6667899999999999999887421 25
Q ss_pred CcEEEEecchHHHHHHHHHH--hCCCCcceEEEecc
Q 017180 169 SDLVIFGGGHAATLTVRAAK--KNLVKPTAIAAVAP 202 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~--~~p~~v~~lvl~~p 202 (376)
.+++||||||||.||...|. .-|. +.++++++-
T Consensus 146 ~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 146 PQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred CceEEEeccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 67999999999999998877 3344 788888764
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-19 Score=168.62 Aligned_cols=245 Identities=12% Similarity=0.031 Sum_probs=145.1
Q ss_pred CCcEEEecCCCCCccchHhH-----HHHHHHHhhhCCcceEEEEeCCCCCcCCCCC--CCCCCHHHHHHHHHHHHhCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWR-----LVAQDIVQRVGKVNWRATIVDWPGLGYSDRP--KMDYNADVMEKFVVDLINAPDS 162 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~-----~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~--~~~~~~~~~~~~l~~~l~~l~~ 162 (376)
++|||++||+. ...+.|+ .++..|.++ ||+|+++|+||+|.|... ..+|..+.+.+.+..+++..+
T Consensus 188 ~~PlLiVp~~i--~k~yilDL~p~~Slv~~L~~q----Gf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g- 260 (532)
T TIGR01838 188 KTPLLIVPPWI--NKYYILDLRPQNSLVRWLVEQ----GHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITG- 260 (532)
T ss_pred CCcEEEECccc--ccceeeecccchHHHHHHHHC----CcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcC-
Confidence 67999999998 8877775 788999886 999999999999998743 235555666777778877776
Q ss_pred CCCCCCCcEEEEecchHHHHHH----HHHHhC-CCCcceEEEeccCCCCCCCcccCC---CCchhhhhHHHHhhhccCc-
Q 017180 163 PVSSSESDLVIFGGGHAATLTV----RAAKKN-LVKPTAIAAVAPTWAGPLPIVFGR---DSSMETRYGLLRGTLRAPG- 233 (376)
Q Consensus 163 ~~~~~~~~~~lvG~S~Gg~ia~----~~a~~~-p~~v~~lvl~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~- 233 (376)
.++++++||||||.++. .++..+ +++|+++++++....-.-+..... ..............-..+.
T Consensus 261 -----~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~ 335 (532)
T TIGR01838 261 -----EKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGR 335 (532)
T ss_pred -----CCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHH
Confidence 78899999999999862 245555 788999999976432111100000 0000001111111000010
Q ss_pred hhhHHhhhhhccHHHHHHHHHhc-------------ccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHH
Q 017180 234 VGWMMYNMLVSNEKAIQSQYKSH-------------VYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 300 (376)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (376)
.-...+..+..........+... +..+...++.+....+.+.....+... . +.. ...
T Consensus 336 ~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~-~-----G~~----~v~ 405 (532)
T TIGR01838 336 QMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALT-T-----GGL----EVC 405 (532)
T ss_pred HHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCc-C-----Cee----EEC
Confidence 01111333311111111111100 111222333333333332222221110 0 000 000
Q ss_pred HHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChH
Q 017180 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPA 358 (376)
Q Consensus 301 ~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe 358 (376)
.....+.+| ++|+++|+|++|.++|.+..+.+.+..++.+..+++++ |++++++|.
T Consensus 406 g~~~dL~~I--~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 406 GVRLDLSKV--KVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CEecchhhC--CCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 123456777 99999999999999999999998888888888899988 999998875
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-19 Score=161.22 Aligned_cols=100 Identities=12% Similarity=0.153 Sum_probs=79.4
Q ss_pred CCcEEEecCCCCCccchHh-----HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH-HHH----HHhC
Q 017180 90 SKNILMIPTISDVSTVEEW-----RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF-VVD----LINA 159 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~-----~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~-l~~----~l~~ 159 (376)
++|||++||+. .+...+ +.++..|.+. ||+|+++|++|+|.|+.. .+.+++..+ +.+ +.+.
T Consensus 62 ~~pvl~v~~~~--~~~~~~d~~~~~~~~~~L~~~----G~~V~~~D~~g~g~s~~~---~~~~d~~~~~~~~~v~~l~~~ 132 (350)
T TIGR01836 62 KTPLLIVYALV--NRPYMLDLQEDRSLVRGLLER----GQDVYLIDWGYPDRADRY---LTLDDYINGYIDKCVDYICRT 132 (350)
T ss_pred CCcEEEecccc--ccceeccCCCCchHHHHHHHC----CCeEEEEeCCCCCHHHhc---CCHHHHHHHHHHHHHHHHHHH
Confidence 56799999987 555444 6789999887 999999999999987633 456666533 444 4444
Q ss_pred CCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 160 PDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 160 l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
.+ .++++++||||||.+++.++..+|++|+++|++++..
T Consensus 133 ~~------~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~ 171 (350)
T TIGR01836 133 SK------LDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPV 171 (350)
T ss_pred hC------CCcccEEEECHHHHHHHHHHHhCchheeeEEEecccc
Confidence 43 6789999999999999999999999999999998754
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-18 Score=150.74 Aligned_cols=264 Identities=18% Similarity=0.244 Sum_probs=150.8
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFV 153 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l 153 (376)
+..+.|...+.. +++|+|+||++ .+...|......+..... .|+|+++|+||||.|. .. .+....+++++
T Consensus 9 ~~~~~~~~~~~~----~~~i~~~hg~~--~~~~~~~~~~~~~~~~~~--~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~ 78 (282)
T COG0596 9 GVRLAYREAGGG----GPPLVLLHGFP--GSSSVWRPVFKVLPALAA--RYRVIAPDLRGHGRSD-PA-GYSLSAYADDL 78 (282)
T ss_pred CeEEEEeecCCC----CCeEEEeCCCC--CchhhhHHHHHHhhcccc--ceEEEEecccCCCCCC-cc-cccHHHHHHHH
Confidence 445667777654 45899999999 998899875455554311 2899999999999997 21 34555668999
Q ss_pred HHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCc
Q 017180 154 VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPG 233 (376)
Q Consensus 154 ~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (376)
..++++++ ..+++++|||+||.+++.++.++|++++++|++++...............................
T Consensus 79 ~~~~~~~~------~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (282)
T COG0596 79 AALLDALG------LEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLD 152 (282)
T ss_pred HHHHHHhC------CCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccc
Confidence 99999987 566999999999999999999999999999999875320000000000000000000000000000
Q ss_pred hhhHHhhhhhccHHHHHHHH-HhcccC-----CCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHh
Q 017180 234 VGWMMYNMLVSNEKAIQSQY-KSHVYS-----NPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFA 307 (376)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (376)
... ......... ...... ...................... ............. .....+.
T Consensus 153 ----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~ 218 (282)
T COG0596 153 ----AAA----FAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAAR-ADLAAALLALLDR-----DLRAALA 218 (282)
T ss_pred ----hhh----hhhhhhcccccccccccchhccccccccccchhHhhhhhhhcc-cccchhhhccccc-----ccchhhc
Confidence 000 000000000 000000 0000000000111000000000 0000000000000 1233455
Q ss_pred cccCCCcEEEEEeCCCCCCCHHHHHHHhcccCC-ceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 308 DLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGV-TKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 308 ~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
.+ .+|+++++|++|.+.+......+.+..++ .++++++++ |+++.++|+.+.+.+.+|+.
T Consensus 219 ~~--~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 219 RI--TVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred cC--CCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 66 89999999999977776666666666664 899999998 99999999999999988543
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-18 Score=157.59 Aligned_cols=268 Identities=10% Similarity=0.058 Sum_probs=147.1
Q ss_pred CCcEEEecCCCCCccchHhH------HHHHHHHhhhCCcceEEEEeCCCCCcCCCC-------CC--CCCCHHHHH-HHH
Q 017180 90 SKNILMIPTISDVSTVEEWR------LVAQDIVQRVGKVNWRATIVDWPGLGYSDR-------PK--MDYNADVME-KFV 153 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~------~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~-------~~--~~~~~~~~~-~~l 153 (376)
+++|||+||++ .+...|. .+...|+++ ||+|+++|+||+|.|.. +. ..++.++++ .|+
T Consensus 74 ~~~Vll~HGl~--~ss~~w~~~~~~~sla~~La~~----GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl 147 (395)
T PLN02872 74 GPPVLLQHGLF--MAGDAWFLNSPEQSLGFILADH----GFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDL 147 (395)
T ss_pred CCeEEEeCccc--ccccceeecCcccchHHHHHhC----CCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHH
Confidence 67899999999 8777773 345567776 99999999999886531 11 257888888 799
Q ss_pred HHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCC---CcceEEEeccCCC-CCCCcccCCCCchh-hhhH-HHHh
Q 017180 154 VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV---KPTAIAAVAPTWA-GPLPIVFGRDSSME-TRYG-LLRG 227 (376)
Q Consensus 154 ~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~p~~~-~~~~~~~~~~~~~~-~~~~-~~~~ 227 (376)
.++++.+... ..++++++||||||.+++.++ .+|+ +|+.+++++|... ..... ... .... .+..
T Consensus 148 ~a~id~i~~~---~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~------~~~~~~~~~~~~~ 217 (395)
T PLN02872 148 AEMIHYVYSI---TNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHVTA------PLVLRMVFMHLDQ 217 (395)
T ss_pred HHHHHHHHhc---cCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccCCC------HHHHHHHHHhHHH
Confidence 9998886311 147899999999999998554 5676 5888888888531 11100 000 0000 0000
Q ss_pred h---hccCc---hhhHHhhhh---hccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHH---h-hc-cC
Q 017180 228 T---LRAPG---VGWMMYNML---VSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAF---L-TG-LL 293 (376)
Q Consensus 228 ~---~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~-~~ 293 (376)
+ +.... ....+.... ..........+......+ ..+....+..+...............+ . .+ +.
T Consensus 218 ~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~-~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~ 296 (395)
T PLN02872 218 MVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTN-CCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFA 296 (395)
T ss_pred HHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCC-cccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcc
Confidence 0 00000 000000000 000000000000000111 123333333222211000000000000 0 00 00
Q ss_pred CCC-CcHHHH---------HHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCC-ceEEEeCCC-CC---CCCCChH
Q 017180 294 DPV-NSREEF---------LQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGV-TKFVEVPGA-LL---PQEEYPA 358 (376)
Q Consensus 294 ~~~-~~~~~~---------~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~-H~---~~~e~pe 358 (376)
..+ +..... .=.+++++.++|+++++|++|.+++++..+++.+..++ .+++.+++. |. ...+.|+
T Consensus 297 ~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape 376 (395)
T PLN02872 297 HYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKE 376 (395)
T ss_pred cCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHH
Confidence 000 001111 00133442247999999999999999988888877776 688899998 95 5668899
Q ss_pred HHHHHHHHHHHhhcCC
Q 017180 359 MVAQELYQFLQQTFEP 374 (376)
Q Consensus 359 ~~~~~i~~fl~~~~~~ 374 (376)
++.+.|.+||++..+.
T Consensus 377 ~V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 377 DVYNHMIQFFRSLGKS 392 (395)
T ss_pred HHHHHHHHHHHHhhhc
Confidence 9999999999987543
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.8e-19 Score=143.26 Aligned_cols=192 Identities=16% Similarity=0.163 Sum_probs=131.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.++|++.||+. ....+.-.+...|..++ +++|+.+|++|+|.|. +|......++..+..+.+-+..| ..
T Consensus 60 ~~~lly~hGNa--~Dlgq~~~~~~~l~~~l---n~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g-----~~ 129 (258)
T KOG1552|consen 60 HPTLLYSHGNA--ADLGQMVELFKELSIFL---NCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYG-----SP 129 (258)
T ss_pred ceEEEEcCCcc--cchHHHHHHHHHHhhcc---cceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcC-----CC
Confidence 47899999997 77776667777776642 6999999999999999 44444333333322223333332 36
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHH
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKA 248 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (376)
++++|+|+|+|...++.+|.+.| ++++||.+|...+ .+.++..
T Consensus 130 ~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~----------------------------~rv~~~~------- 172 (258)
T KOG1552|consen 130 ERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSG----------------------------MRVAFPD------- 172 (258)
T ss_pred ceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhh----------------------------hhhhccC-------
Confidence 88999999999999999999998 8999999994200 0000000
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCH
Q 017180 249 IQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSK 328 (376)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~ 328 (376)
.....+.+ .+. ..+.++.+ +||+|++||++|.+++.
T Consensus 173 ----~~~~~~~d------------------------------~f~--------~i~kI~~i--~~PVLiiHgtdDevv~~ 208 (258)
T KOG1552|consen 173 ----TKTTYCFD------------------------------AFP--------NIEKISKI--TCPVLIIHGTDDEVVDF 208 (258)
T ss_pred ----cceEEeec------------------------------ccc--------ccCcceec--cCCEEEEecccCceecc
Confidence 00000000 000 12234556 99999999999999999
Q ss_pred HHHHHHhcccCC-ceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 329 AEMEALKGAKGV-TKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 329 ~~~~~~~~~~~~-~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
....++-+..++ .+..++.|+ |.-.+-.| ++.+.+..|+.....
T Consensus 209 sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~-~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 209 SHGKALYERCKEKVEPLWVKGAGHNDIELYP-EYIEHLRRFISSVLP 254 (258)
T ss_pred cccHHHHHhccccCCCcEEecCCCcccccCH-HHHHHHHHHHHHhcc
Confidence 999998766554 477788888 98666656 488999999987654
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.8e-19 Score=138.27 Aligned_cols=203 Identities=14% Similarity=0.153 Sum_probs=136.6
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
.|+++++||.. ++..++-.++..+-.++ +.+|+.+++||||.|+..+..... .-|-..+++.+-.+......
T Consensus 78 ~pTlLyfh~NA--GNmGhr~~i~~~fy~~l---~mnv~ivsYRGYG~S~GspsE~GL---~lDs~avldyl~t~~~~dkt 149 (300)
T KOG4391|consen 78 RPTLLYFHANA--GNMGHRLPIARVFYVNL---KMNVLIVSYRGYGKSEGSPSEEGL---KLDSEAVLDYLMTRPDLDKT 149 (300)
T ss_pred CceEEEEccCC--CcccchhhHHHHHHHHc---CceEEEEEeeccccCCCCccccce---eccHHHHHHHHhcCccCCcc
Confidence 78999999999 88888878777776643 799999999999999944332222 22333444444333344578
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHH
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAI 249 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (376)
++++.|.|+||++|+.+|.+..+++.++|+-+... ..|.+ ..+. .+... ...+
T Consensus 150 kivlfGrSlGGAvai~lask~~~ri~~~ivENTF~--SIp~~------------------~i~~----v~p~~---~k~i 202 (300)
T KOG4391|consen 150 KIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFL--SIPHM------------------AIPL----VFPFP---MKYI 202 (300)
T ss_pred eEEEEecccCCeeEEEeeccchhheeeeeeechhc--cchhh------------------hhhe----eccch---hhHH
Confidence 89999999999999999999999999999988632 01100 0000 00000 0111
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHH
Q 017180 250 QSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKA 329 (376)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~ 329 (376)
..+.-+..+. -...+++- +.|.|+|.|.+|.++|+.
T Consensus 203 ~~lc~kn~~~------------------------------------------S~~ki~~~--~~P~LFiSGlkDelVPP~ 238 (300)
T KOG4391|consen 203 PLLCYKNKWL------------------------------------------SYRKIGQC--RMPFLFISGLKDELVPPV 238 (300)
T ss_pred HHHHHHhhhc------------------------------------------chhhhccc--cCceEEeecCccccCCcH
Confidence 1110000000 01122333 789999999999999999
Q ss_pred HHHHHhcccC--CceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 330 EMEALKGAKG--VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 330 ~~~~~~~~~~--~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
+.+.+.+..| +.++.++|+| |.-.+-. +-+.++|.+||.+..
T Consensus 239 ~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~-dGYfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 239 MMRQLYELCPSRTKRLAEFPDGTHNDTWIC-DGYFQAIEDFLAEVV 283 (300)
T ss_pred HHHHHHHhCchhhhhheeCCCCccCceEEe-ccHHHHHHHHHHHhc
Confidence 9999987765 5689999999 9844432 458899999999864
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.6e-18 Score=146.53 Aligned_cols=107 Identities=16% Similarity=0.126 Sum_probs=86.1
Q ss_pred CCcEEEecCCCCC--ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDV--STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~--~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
.++|||+||++.. .+...|..+++.|++. ||+|+++|+||||.|+......+.+.+.+|+.++++.+... .
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~----Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~---~ 97 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAG----GFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ---G 97 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHC----CCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc---C
Confidence 5689999999822 1235677788899876 99999999999999985544567788888887765444211 1
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
..+++|+||||||.+++.+|.++|++++++|+++|.
T Consensus 98 ~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~ 133 (266)
T TIGR03101 98 HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPV 133 (266)
T ss_pred CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccc
Confidence 578999999999999999999999999999999984
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.8e-18 Score=132.41 Aligned_cols=143 Identities=17% Similarity=0.365 Sum_probs=109.3
Q ss_pred cEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcE
Q 017180 92 NILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDL 171 (376)
Q Consensus 92 ~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~ 171 (376)
+|||+||++ .+...|..++..|++. ||.|+.+|+||+|.+.... ...+.+.++.+... ...++
T Consensus 1 ~vv~~HG~~--~~~~~~~~~~~~l~~~----G~~v~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-----~~~~i 63 (145)
T PF12695_consen 1 VVVLLHGWG--GSRRDYQPLAEALAEQ----GYAVVAFDYPGHGDSDGAD------AVERVLADIRAGYP-----DPDRI 63 (145)
T ss_dssp EEEEECTTT--TTTHHHHHHHHHHHHT----TEEEEEESCTTSTTSHHSH------HHHHHHHHHHHHHC-----TCCEE
T ss_pred CEEEECCCC--CCHHHHHHHHHHHHHC----CCEEEEEecCCCCccchhH------HHHHHHHHHHhhcC-----CCCcE
Confidence 589999999 8899999999999997 9999999999999874211 22222222211111 26789
Q ss_pred EEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHH
Q 017180 172 VIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQS 251 (376)
Q Consensus 172 ~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (376)
+++|||+||.+++.++.+. .+++++|+++|.. .
T Consensus 64 ~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~---------------------------------------~------- 96 (145)
T PF12695_consen 64 ILIGHSMGGAIAANLAARN-PRVKAVVLLSPYP---------------------------------------D------- 96 (145)
T ss_dssp EEEEETHHHHHHHHHHHHS-TTESEEEEESESS---------------------------------------G-------
T ss_pred EEEEEccCcHHHHHHhhhc-cceeEEEEecCcc---------------------------------------c-------
Confidence 9999999999999999988 7899999998710 0
Q ss_pred HHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHH
Q 017180 252 QYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEM 331 (376)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~ 331 (376)
.+.+.+. +.|+++++|++|..++.+..
T Consensus 97 ---------------------------------------------------~~~~~~~--~~pv~~i~g~~D~~~~~~~~ 123 (145)
T PF12695_consen 97 ---------------------------------------------------SEDLAKI--RIPVLFIHGENDPLVPPEQV 123 (145)
T ss_dssp ---------------------------------------------------CHHHTTT--TSEEEEEEETT-SSSHHHHH
T ss_pred ---------------------------------------------------hhhhhcc--CCcEEEEEECCCCcCCHHHH
Confidence 0012233 78999999999999999999
Q ss_pred HHHhcccC-CceEEEeCCC-CC
Q 017180 332 EALKGAKG-VTKFVEVPGA-LL 351 (376)
Q Consensus 332 ~~~~~~~~-~~~~~~~~~~-H~ 351 (376)
+++.+..+ +.++++++++ |+
T Consensus 124 ~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 124 RRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp HHHHHHHCSSEEEEEETTS-TT
T ss_pred HHHHHHcCCCcEEEEeCCCcCc
Confidence 98866554 6899999999 96
|
... |
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-17 Score=167.81 Aligned_cols=268 Identities=12% Similarity=0.136 Sum_probs=150.7
Q ss_pred CCcEEEecCCCCCccchHhHHH-----HHHHHhhhCCcceEEEEeCCCCCcCCCCCCC--CCCHHHHHHHHHHHHhCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLV-----AQDIVQRVGKVNWRATIVDWPGLGYSDRPKM--DYNADVMEKFVVDLINAPDS 162 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~-----~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~--~~~~~~~~~~l~~~l~~l~~ 162 (376)
++||||+||++ .+...|+.+ ++.|.+. ||+|+++| +|.|+.+.. ..++++++..+.+.++.+..
T Consensus 67 ~~plllvhg~~--~~~~~~d~~~~~s~v~~L~~~----g~~v~~~d---~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~ 137 (994)
T PRK07868 67 GPPVLMVHPMM--MSADMWDVTRDDGAVGILHRA----GLDPWVID---FGSPDKVEGGMERNLADHVVALSEAIDTVKD 137 (994)
T ss_pred CCcEEEECCCC--CCccceecCCcccHHHHHHHC----CCEEEEEc---CCCCChhHcCccCCHHHHHHHHHHHHHHHHH
Confidence 68999999999 999999875 7888776 89999999 477765432 45777777666666654210
Q ss_pred CCCCCCCcEEEEecchHHHHHHHHHHhC-CCCcceEEEeccCCCC--CCCc-ccCCC--Cchhhhh-HHHHhhhccCc-h
Q 017180 163 PVSSSESDLVIFGGGHAATLTVRAAKKN-LVKPTAIAAVAPTWAG--PLPI-VFGRD--SSMETRY-GLLRGTLRAPG-V 234 (376)
Q Consensus 163 ~~~~~~~~~~lvG~S~Gg~ia~~~a~~~-p~~v~~lvl~~p~~~~--~~~~-~~~~~--~~~~~~~-~~~~~~~~~~~-~ 234 (376)
. ..++++++||||||.+++.++..+ +++|+++|++++.... ..+. .+... ....... ..... ...|. .
T Consensus 138 ~---~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~ 213 (994)
T PRK07868 138 V---TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNR-LDIPGWM 213 (994)
T ss_pred h---hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhc-CCCCHHH
Confidence 0 146799999999999999998744 5689999988764311 1010 00000 0000000 00111 11111 1
Q ss_pred hhHHhhhhhccHHHHHH--HHHhcccCCCCCCChHHHHHHHHHH---hccCC--CchhHHHhh--ccCCCCCcHHHHHHH
Q 017180 235 GWMMYNMLVSNEKAIQS--QYKSHVYSNPDNVTPGIVESRYALT---KRKGA--RYVPAAFLT--GLLDPVNSREEFLQL 305 (376)
Q Consensus 235 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~ 305 (376)
....+..+.. ...+.. .+...........+++....+.... ..++. ......+.. ...........-...
T Consensus 214 ~~~~~~~l~p-~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~ 292 (994)
T PRK07868 214 ARTGFQMLDP-VKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVT 292 (994)
T ss_pred HHHHHHhcCh-hHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcc
Confidence 1111211100 001110 1111222212223333333333222 11110 111111111 000000000000123
Q ss_pred HhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceE-EEeCCC-CCCCC---CChHHHHHHHHHHHHhhcC
Q 017180 306 FADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKF-VEVPGA-LLPQE---EYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 306 ~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~-H~~~~---e~pe~~~~~i~~fl~~~~~ 373 (376)
+++| ++|+|+|+|++|.+++++..+.+.+..++.++ .+++++ |+.++ ..++++...|.+||.+..+
T Consensus 293 L~~i--~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 293 LADI--TCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred hhhC--CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhcc
Confidence 6777 99999999999999999999999988999987 577887 99655 3578899999999998654
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.8e-17 Score=138.76 Aligned_cols=242 Identities=11% Similarity=0.103 Sum_probs=135.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|.||++||+.++.....-+.++..+.++ ||.|++++.||||.+.... .-|+ .-+.+|+..+++.+..+. ..
T Consensus 75 ~P~vVl~HGL~G~s~s~y~r~L~~~~~~r----g~~~Vv~~~Rgcs~~~n~~p~~yh-~G~t~D~~~~l~~l~~~~--~~ 147 (345)
T COG0429 75 KPLVVLFHGLEGSSNSPYARGLMRALSRR----GWLVVVFHFRGCSGEANTSPRLYH-SGETEDIRFFLDWLKARF--PP 147 (345)
T ss_pred CceEEEEeccCCCCcCHHHHHHHHHHHhc----CCeEEEEecccccCCcccCcceec-ccchhHHHHHHHHHHHhC--CC
Confidence 67899999998666666667788888887 9999999999999987432 2222 222355555555442111 47
Q ss_pred CcEEEEecchHH-HHHHHHHHhCC--CCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCch----hhHHhhh
Q 017180 169 SDLVIFGGGHAA-TLTVRAAKKNL--VKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGV----GWMMYNM 241 (376)
Q Consensus 169 ~~~~lvG~S~Gg-~ia~~~a~~~p--~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 241 (376)
+++..||.|+|| +++..++.+.- ..-.++++.+|.-. ......+..... ...+.+.
T Consensus 148 r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl-----------------~~~~~~l~~~~s~~ly~r~l~~~ 210 (345)
T COG0429 148 RPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDL-----------------EACAYRLDSGFSLRLYSRYLLRN 210 (345)
T ss_pred CceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHH-----------------HHHHHHhcCchhhhhhHHHHHHH
Confidence 899999999999 55555555322 22334444454210 011111111111 1111111
Q ss_pred hhccHHHHHHHHHhcccCCCCCCChH---HHHHHHHHHhcc--------CCCchhHHHhhccCCCCCcHHHHHHHHhccc
Q 017180 242 LVSNEKAIQSQYKSHVYSNPDNVTPG---IVESRYALTKRK--------GARYVPAAFLTGLLDPVNSREEFLQLFADLE 310 (376)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 310 (376)
+ ...+...+. .+ ....... .++.+.....-. +...+...+-.. .-.+.+++|
T Consensus 211 L---~~~~~~kl~--~l--~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~a---------Ss~~~L~~I- 273 (345)
T COG0429 211 L---KRNAARKLK--EL--EPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQA---------SSLPLLPKI- 273 (345)
T ss_pred H---HHHHHHHHH--hc--CcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhc---------ccccccccc-
Confidence 1 111111111 11 1111111 111111111100 111111111111 123456777
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHhc-ccCCceEEEeCCC-CCCCCC----ChH-HHHHHHHHHHHhhcC
Q 017180 311 GKLPLLVVSTEGSPRRSKAEMEALKG-AKGVTKFVEVPGA-LLPQEE----YPA-MVAQELYQFLQQTFE 373 (376)
Q Consensus 311 ~~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~-H~~~~e----~pe-~~~~~i~~fl~~~~~ 373 (376)
.+|+|||+..+|++++.+....... ..|++.+...+.| |+-++. +|. ..-+.|.+||+...+
T Consensus 274 -r~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 274 -RKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred -ccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 9999999999999999988887765 7889999999888 997776 443 456788899887643
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.6e-16 Score=130.22 Aligned_cols=116 Identities=14% Similarity=0.328 Sum_probs=99.2
Q ss_pred eEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC-CCCCCCHHHHHHHHH
Q 017180 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR-PKMDYNADVMEKFVV 154 (376)
Q Consensus 76 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~-~~~~~~~~~~~~~l~ 154 (376)
+-.|.+..+... +..+||-+||-+ ++...|+.+.+.|.+. |.|+|.+.+||+|.++. +...|+-++-..-+.
T Consensus 22 ~a~y~D~~~~gs-~~gTVv~~hGsP--GSH~DFkYi~~~l~~~----~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~ 94 (297)
T PF06342_consen 22 QAVYEDSLPSGS-PLGTVVAFHGSP--GSHNDFKYIRPPLDEA----GIRFIGINYPGFGFTPGYPDQQYTNEERQNFVN 94 (297)
T ss_pred EEEEEecCCCCC-CceeEEEecCCC--CCccchhhhhhHHHHc----CeEEEEeCCCCCCCCCCCcccccChHHHHHHHH
Confidence 446777654321 033799999999 9999999999999997 99999999999999994 456899999999999
Q ss_pred HHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCC
Q 017180 155 DLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWA 205 (376)
Q Consensus 155 ~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~ 205 (376)
++++.++ ..++++.+|||.||-.|+.+|..+| +.++++++|.+.
T Consensus 95 ~ll~~l~-----i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 95 ALLDELG-----IKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred HHHHHcC-----CCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 9999998 4678999999999999999999886 569999999763
|
|
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.75 E-value=3e-16 Score=129.55 Aligned_cols=261 Identities=16% Similarity=0.124 Sum_probs=168.3
Q ss_pred eEEEEecccCCCCCCCcEEEecCCCCCccchH-hHHH-----HHHHHhhhCCcceEEEEeCCCCCcCCC--CCC--CCCC
Q 017180 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEE-WRLV-----AQDIVQRVGKVNWRATIVDWPGLGYSD--RPK--MDYN 145 (376)
Q Consensus 76 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~-~~~~-----~~~L~~~~~~~~~~Vi~~D~~G~G~S~--~~~--~~~~ 145 (376)
.++....|+.+. ++|+||-.|.++ -+... |..+ +..+.+ +|-|+.+|.|||-.-. -|. .-.+
T Consensus 33 ~v~V~V~Gd~~~-~kpaiiTyhDlg--lN~~scFq~ff~~p~m~ei~~-----~fcv~HV~~PGqe~gAp~~p~~y~yPs 104 (326)
T KOG2931|consen 33 VVHVTVYGDPKG-NKPAIITYHDLG--LNHKSCFQGFFNFPDMAEILE-----HFCVYHVDAPGQEDGAPSFPEGYPYPS 104 (326)
T ss_pred cEEEEEecCCCC-CCceEEEecccc--cchHhHhHHhhcCHhHHHHHh-----heEEEecCCCccccCCccCCCCCCCCC
Confidence 567888887664 367788889999 65544 5433 445555 6999999999996544 232 2568
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHH
Q 017180 146 ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLL 225 (376)
Q Consensus 146 ~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~ 225 (376)
.++++++|..++++++ .+.++-+|-..|+.|..++|..||++|.+|||+++... ..++.+. .
T Consensus 105 md~LAd~l~~VL~~f~------lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~--------a~gwiew----~ 166 (326)
T KOG2931|consen 105 MDDLADMLPEVLDHFG------LKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPC--------AKGWIEW----A 166 (326)
T ss_pred HHHHHHHHHHHHHhcC------cceEEEecccccHHHHHHHHhcChhheeEEEEEecCCC--------CchHHHH----H
Confidence 9999999999999997 78899999999999999999999999999999988421 1111111 1
Q ss_pred HhhhccCchhhHHhhhhhccHHHHHHHHHhcccC-CCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHH
Q 017180 226 RGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYS-NPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQ 304 (376)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (376)
.. .+....++... ....+...+....+. +...-..++++.|...+...........|+.++.....-..+...
T Consensus 167 ~~----K~~s~~l~~~G--mt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~ 240 (326)
T KOG2931|consen 167 YN----KVSSNLLYYYG--MTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPK 240 (326)
T ss_pred HH----HHHHHHHHhhc--hhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCC
Confidence 10 11111111110 011222222222222 222346778888887776655545555555554332210000111
Q ss_pred HHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 305 LFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 305 ~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
....+ +||+|++.|++.+.+..-..-.-+-...+..+..+.++ -++.+++|.++++.+.-|++.
T Consensus 241 ~~~tl--kc~vllvvGd~Sp~~~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 241 LGTTL--KCPVLLVVGDNSPHVSAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred cCccc--cccEEEEecCCCchhhhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 11145 79999999999987763222211222346788999998 999999999999999999975
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.8e-16 Score=132.02 Aligned_cols=279 Identities=15% Similarity=0.108 Sum_probs=168.4
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchH--------h-HHHHHHHHhhhCCcceEEEEeCCCCCc-CCCCCC--
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEE--------W-RLVAQDIVQRVGKVNWRATIVDWPGLG-YSDRPK-- 141 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~--------~-~~~~~~L~~~~~~~~~~Vi~~D~~G~G-~S~~~~-- 141 (376)
..+|.|+.+|.-+.+....||++||+.+..+... | +.++.. .+......|.||++|-.|.+ .|+.|.
T Consensus 35 ~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGp-G~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 35 DARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGP-GKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred CcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCC-CCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 5678999999876644557888899994333322 3 333211 00011126999999999987 454332
Q ss_pred -----------CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEE-EEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCC
Q 017180 142 -----------MDYNADVMEKFVVDLINAPDSPVSSSESDLV-IFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLP 209 (376)
Q Consensus 142 -----------~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~ 209 (376)
..+++.+++..-..++++++ .+++. |||.||||+.++.++..+|++|.++|.++.+..
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LG------I~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r---- 183 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDALG------IKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAAR---- 183 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhcC------cceEeeeeccChHHHHHHHHHHhChHHHhhhheeccccc----
Confidence 24788898888888999998 56655 899999999999999999999999999876421
Q ss_pred cccCCCCchhhh-hHHHH-hhhccCch-------------hhHHhhhh----hccHHHHHHHHHhcccCCCCCC--ChHH
Q 017180 210 IVFGRDSSMETR-YGLLR-GTLRAPGV-------------GWMMYNML----VSNEKAIQSQYKSHVYSNPDNV--TPGI 268 (376)
Q Consensus 210 ~~~~~~~~~~~~-~~~~~-~~~~~~~~-------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~ 268 (376)
...+... ....+ .+...|.+ +-.+.+.+ ...+..+...+.+....++... ....
T Consensus 184 -----~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~ 258 (368)
T COG2021 184 -----LSAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFA 258 (368)
T ss_pred -----CCHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHH
Confidence 0111110 11111 11111111 11111110 0112222222322221111111 1233
Q ss_pred HHHHHHHHhcc----CCCchhHHHhh--ccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCce
Q 017180 269 VESRYALTKRK----GARYVPAAFLT--GLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTK 342 (376)
Q Consensus 269 ~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~ 342 (376)
++.|.+..... --...+..+.. ...+......++.+.++++ +.|+|++.-+.|...|++..+.+.+.++.+.
T Consensus 259 vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i--~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~ 336 (368)
T COG2021 259 VESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARI--KAPVLVVGITSDWLFPPELQRALAEALPAAG 336 (368)
T ss_pred HHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcC--ccCEEEEEecccccCCHHHHHHHHHhccccC
Confidence 44443322211 11112222211 2233333345678889999 9999999999999999999999988887766
Q ss_pred -EEEeCCC--CCCCCCChHHHHHHHHHHHHh
Q 017180 343 -FVEVPGA--LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 343 -~~~~~~~--H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+++++.- |-.++...+.+...|..||..
T Consensus 337 ~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 337 ALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred ceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 7777753 998888888899999999975
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.2e-15 Score=131.22 Aligned_cols=133 Identities=16% Similarity=0.151 Sum_probs=87.3
Q ss_pred ccceEEeecCCceeEEEEecccCC--CCCCCcEEEecCCCCCccchHhHH--HHHHHHhhhCCcceEEEEeCC--CCCcC
Q 017180 63 TGNWQWKFKENSINIYYEKHERES--PDPSKNILMIPTISDVSTVEEWRL--VAQDIVQRVGKVNWRATIVDW--PGLGY 136 (376)
Q Consensus 63 ~~~~~~~~~~~g~~l~y~~~g~~~--~~~~~~vvllHG~~~~~~~~~~~~--~~~~L~~~~~~~~~~Vi~~D~--~G~G~ 136 (376)
..++.+.-...+.++.|...-++. .++.|+|+|+||++ ++...|.. .+..+++. .|+.|+++|. +|+|.
T Consensus 13 ~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~--~~~~~~~~~~~~~~la~~---~g~~Vv~Pd~~~~g~~~ 87 (275)
T TIGR02821 13 QGFYRHKSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLT--CTHENFMIKAGAQRFAAE---HGLALVAPDTSPRGTGI 87 (275)
T ss_pred EEEEEEeccccCCceEEEEEcCCCccCCCCCEEEEccCCC--CCccHHHhhhHHHHHHhh---cCcEEEEeCCCCCcCCC
Confidence 344445444445565565554321 22368899999999 77777743 23445432 1799999998 56554
Q ss_pred CCCC--------------------CCCCCHHH-HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcc
Q 017180 137 SDRP--------------------KMDYNADV-MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPT 195 (376)
Q Consensus 137 S~~~--------------------~~~~~~~~-~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~ 195 (376)
+... ...+.... ..+++..++++.. ....++++++||||||.+++.++.++|+.++
T Consensus 88 ~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~ 164 (275)
T TIGR02821 88 AGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQF---PLDGERQGITGHSMGGHGALVIALKNPDRFK 164 (275)
T ss_pred CCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhC---CCCCCceEEEEEChhHHHHHHHHHhCcccce
Confidence 3211 01223333 3567777776621 0125689999999999999999999999999
Q ss_pred eEEEeccC
Q 017180 196 AIAAVAPT 203 (376)
Q Consensus 196 ~lvl~~p~ 203 (376)
++++++|.
T Consensus 165 ~~~~~~~~ 172 (275)
T TIGR02821 165 SVSAFAPI 172 (275)
T ss_pred EEEEECCc
Confidence 99999884
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.1e-16 Score=123.38 Aligned_cols=216 Identities=12% Similarity=0.080 Sum_probs=137.9
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
...+|++||+-..-+......++..|.+. |+.++.+|++|.|+|+..-..-.....++||..+++.+... ...
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~----gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~---nr~ 105 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEKE----GISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNS---NRV 105 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHhc----CceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccC---ceE
Confidence 45799999999444455667788888887 99999999999999985432222333458999999887511 112
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHH
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAI 249 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (376)
--+++|||-||.+++.+|.++.+ ++.+|-+++-+.. ...+.. + + .+..+
T Consensus 106 v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl------------------------~~~I~e---R-l--g~~~l 154 (269)
T KOG4667|consen 106 VPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDL------------------------KNGINE---R-L--GEDYL 154 (269)
T ss_pred EEEEEeecCccHHHHHHHHhhcC-chheEEcccccch------------------------hcchhh---h-h--cccHH
Confidence 24668999999999999999887 6777777653210 011100 0 0 12223
Q ss_pred HHHHHhcccCCC-------CCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCC
Q 017180 250 QSQYKSHVYSNP-------DNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEG 322 (376)
Q Consensus 250 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~ 322 (376)
.+.....++..+ ...+++.+.... +. ++.+...+|..+||||-+||..
T Consensus 155 ~~ike~Gfid~~~rkG~y~~rvt~eSlmdrL--------------------nt-----d~h~aclkId~~C~VLTvhGs~ 209 (269)
T KOG4667|consen 155 ERIKEQGFIDVGPRKGKYGYRVTEESLMDRL--------------------NT-----DIHEACLKIDKQCRVLTVHGSE 209 (269)
T ss_pred HHHHhCCceecCcccCCcCceecHHHHHHHH--------------------hc-----hhhhhhcCcCccCceEEEeccC
Confidence 321222222111 112222111110 10 1334444565699999999999
Q ss_pred CCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 323 SPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 323 D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
|.++|.+.++++++.+++.++.++||+ |.....+-+ .......|..
T Consensus 210 D~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~q~~-l~~lgl~f~k 256 (269)
T KOG4667|consen 210 DEIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGHQSQ-LVSLGLEFIK 256 (269)
T ss_pred CceeechhHHHHHHhccCCceEEecCCCcCccchhhh-HhhhcceeEE
Confidence 999999999999999999999999999 986554433 4444444443
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-16 Score=134.38 Aligned_cols=107 Identities=11% Similarity=0.051 Sum_probs=69.0
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-----------CCCCC---HHHHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-----------KMDYN---ADVMEKFVVD 155 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-----------~~~~~---~~~~~~~l~~ 155 (376)
.+.|||+||++ ++...|..+++.|.+. ++++..++++|...+... ..... ++...+.+.+
T Consensus 16 ~~~vIlLHG~G--~~~~~~~~l~~~l~~~----~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 16 QQLLLLFHGVG--DNPVAMGEIGSWFAPA----FPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred CcEEEEEeCCC--CChHHHHHHHHHHHHH----CCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHH
Confidence 67899999999 9999999999999875 555555556665322100 00111 1222222333
Q ss_pred HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 156 LINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 156 ~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
+++.+..+.....++++++|+|+||.+++.++.++|+.+.+++.+++
T Consensus 90 ~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg 136 (232)
T PRK11460 90 TVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSG 136 (232)
T ss_pred HHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecc
Confidence 33322111112356899999999999999999999988777776654
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.4e-16 Score=131.42 Aligned_cols=256 Identities=19% Similarity=0.191 Sum_probs=146.7
Q ss_pred eEEEEecccCCCCCCCcEEEecCCCCCccchH-hHHH-----HHHHHhhhCCcceEEEEeCCCCCcCCC--CCC--CCCC
Q 017180 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEE-WRLV-----AQDIVQRVGKVNWRATIVDWPGLGYSD--RPK--MDYN 145 (376)
Q Consensus 76 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~-~~~~-----~~~L~~~~~~~~~~Vi~~D~~G~G~S~--~~~--~~~~ 145 (376)
.+++...|+.+. .+|+||-.|-.| -+... |..+ +..+.+ +|-|+-+|.||+..-. -|. ...|
T Consensus 10 ~v~V~v~G~~~~-~kp~ilT~HDvG--lNh~scF~~ff~~~~m~~i~~-----~f~i~Hi~aPGqe~ga~~~p~~y~yPs 81 (283)
T PF03096_consen 10 SVHVTVQGDPKG-NKPAILTYHDVG--LNHKSCFQGFFNFEDMQEILQ-----NFCIYHIDAPGQEEGAATLPEGYQYPS 81 (283)
T ss_dssp EEEEEEESS--T-TS-EEEEE--TT----HHHHCHHHHCSHHHHHHHT-----TSEEEEEE-TTTSTT-----TT-----
T ss_pred EEEEEEEecCCC-CCceEEEecccc--ccchHHHHHHhcchhHHHHhh-----ceEEEEEeCCCCCCCcccccccccccC
Confidence 677888887653 267888899999 66554 5443 455666 7999999999997654 222 3568
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHH
Q 017180 146 ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLL 225 (376)
Q Consensus 146 ~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~ 225 (376)
++++++++.+++++++ .+.++.+|-..|+.|..++|..+|++|.++||++|.. ...++.+.....+
T Consensus 82 md~LAe~l~~Vl~~f~------lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~--------~~~gw~Ew~~~K~ 147 (283)
T PF03096_consen 82 MDQLAEMLPEVLDHFG------LKSVIGFGVGAGANILARFALKHPERVLGLILVNPTC--------TAAGWMEWFYQKL 147 (283)
T ss_dssp HHHHHCTHHHHHHHHT---------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES-----------S---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCC------ccEEEEEeeccchhhhhhccccCccceeEEEEEecCC--------CCccHHHHHHHHH
Confidence 9999999999999998 7889999999999999999999999999999999853 1112222221111
Q ss_pred H-hhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHH
Q 017180 226 R-GTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQ 304 (376)
Q Consensus 226 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (376)
. ..+....+..... +..+...+.+... ....++++.+...............|+..+.. +.++..
T Consensus 148 ~~~~L~~~gmt~~~~------d~Ll~h~Fg~~~~----~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~----R~DL~~ 213 (283)
T PF03096_consen 148 SSWLLYSYGMTSSVK------DYLLWHYFGKEEE----ENNSDLVQTYRQHLDERINPKNLALFLNSYNS----RTDLSI 213 (283)
T ss_dssp H-------CTTS-HH------HHHHHHHS-HHHH----HCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT---------S
T ss_pred hcccccccccccchH------Hhhhhcccccccc----cccHHHHHHHHHHHhcCCCHHHHHHHHHHHhc----cccchh
Confidence 1 0111111111111 1111111211111 12455677776666554443444555444322 223555
Q ss_pred HHhcccCCCcEEEEEeCCCCCCCHHHHHHHh-cc-cCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 305 LFADLEGKLPLLVVSTEGSPRRSKAEMEALK-GA-KGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 305 ~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~-~~-~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
..+.. .||+|++.|++.+..... .++. +. ..+.++..++++ =++.+|+|+++++.+.-||+..
T Consensus 214 ~~~~~--~c~vLlvvG~~Sp~~~~v--v~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 214 ERPSL--GCPVLLVVGDNSPHVDDV--VEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp ECTTC--CS-EEEEEETTSTTHHHH--HHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred hcCCC--CCCeEEEEecCCcchhhH--HHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 56666 899999999999876532 2332 22 236789999999 9999999999999999999853
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.3e-15 Score=120.71 Aligned_cols=223 Identities=13% Similarity=0.127 Sum_probs=143.1
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhC-CCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA-PDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~-l~~~~~~~~ 168 (376)
+..++++|=.| ++...|+.....|.. .+.++++++||+|.--......+++.+++.|..-+.. . ..
T Consensus 7 ~~~L~cfP~AG--Gsa~~fr~W~~~lp~-----~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~------~d 73 (244)
T COG3208 7 RLRLFCFPHAG--GSASLFRSWSRRLPA-----DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPL------LD 73 (244)
T ss_pred CceEEEecCCC--CCHHHHHHHHhhCCc-----hhheeeecCCCcccccCCcccccHHHHHHHHHHHhcccc------CC
Confidence 56789998888 888888888888887 6999999999999765444567888998888877773 3 37
Q ss_pred CcEEEEecchHHHHHHHHHHhC---CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhcc
Q 017180 169 SDLVIFGGGHAATLTVRAAKKN---LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSN 245 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~---p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (376)
+++.++||||||++|.++|.+. -..+..+.+.+... |..... ...... +.
T Consensus 74 ~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~a----P~~~~~---------------------~~i~~~--~D 126 (244)
T COG3208 74 APFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRA----PHYDRG---------------------KQIHHL--DD 126 (244)
T ss_pred CCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCC----CCCccc---------------------CCccCC--CH
Confidence 8999999999999999999831 12255666554321 110000 000000 11
Q ss_pred HHHHHHHHHhcccCCCC-CCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCC
Q 017180 246 EKAIQSQYKSHVYSNPD-NVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSP 324 (376)
Q Consensus 246 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~ 324 (376)
..++.. +.......+. .-++|+++........ . ......+.-. .-..+ .||+.++.|++|.
T Consensus 127 ~~~l~~-l~~lgG~p~e~led~El~~l~LPilRA-D-----~~~~e~Y~~~---------~~~pl--~~pi~~~~G~~D~ 188 (244)
T COG3208 127 ADFLAD-LVDLGGTPPELLEDPELMALFLPILRA-D-----FRALESYRYP---------PPAPL--ACPIHAFGGEKDH 188 (244)
T ss_pred HHHHHH-HHHhCCCChHHhcCHHHHHHHHHHHHH-H-----HHHhcccccC---------CCCCc--CcceEEeccCcch
Confidence 222221 1111111111 1223333333222211 0 0001111100 01244 8999999999999
Q ss_pred CCCHHHHHHHhcccC-CceEEEeCCCCCCCCCChHHHHHHHHHHHHh
Q 017180 325 RRSKAEMEALKGAKG-VTKFVEVPGALLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 325 ~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~ 370 (376)
.+..+....+++... ..+++.++|+|+...++.+++...|.+.+..
T Consensus 189 ~vs~~~~~~W~~~t~~~f~l~~fdGgHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 189 EVSRDELGAWREHTKGDFTLRVFDGGHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred hccHHHHHHHHHhhcCCceEEEecCcceehhhhHHHHHHHHHHHhhh
Confidence 999999998876544 7899999999999999999999999998863
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.8e-15 Score=129.54 Aligned_cols=247 Identities=13% Similarity=0.136 Sum_probs=136.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|.||++||+.+.+....-+.++..+.+. ||+|+++..||+|.|. ..+..|+. .+.+|+.++++++..++ +.
T Consensus 125 ~P~vvilpGltg~S~~~YVr~lv~~a~~~----G~r~VVfN~RG~~g~~LtTpr~f~a-g~t~Dl~~~v~~i~~~~--P~ 197 (409)
T KOG1838|consen 125 DPIVVILPGLTGGSHESYVRHLVHEAQRK----GYRVVVFNHRGLGGSKLTTPRLFTA-GWTEDLREVVNHIKKRY--PQ 197 (409)
T ss_pred CcEEEEecCCCCCChhHHHHHHHHHHHhC----CcEEEEECCCCCCCCccCCCceeec-CCHHHHHHHHHHHHHhC--CC
Confidence 68999999988555555566777777776 9999999999999998 33333332 34566776666665444 46
Q ss_pred CcEEEEecchHHHHHHHHHHhC---CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhcc
Q 017180 169 SDLVIFGGGHAATLTVRAAKKN---LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSN 245 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~---p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (376)
.++..||.||||.+...|..+- ...+.++++++|.-.- .....+..+......-+.+...
T Consensus 198 a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~-----------------~~~~~~~~~~~~~~y~~~l~~~ 260 (409)
T KOG1838|consen 198 APLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLL-----------------AASRSIETPLYRRFYNRALTLN 260 (409)
T ss_pred CceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhh-----------------hhhhHHhcccchHHHHHHHHHh
Confidence 7899999999999999998743 3345666666662100 0111111111111111111000
Q ss_pred -HHHHHHHHHhcccCCCCCC----ChHHHHHHHHHHhcc-CCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEE
Q 017180 246 -EKAIQSQYKSHVYSNPDNV----TPGIVESRYALTKRK-GARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVS 319 (376)
Q Consensus 246 -~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~ 319 (376)
...+. ......+.+.... ....+..+.+....+ .+......++.. ....+.+.+| ++|+|+|+
T Consensus 261 l~~~~~-~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~--------aSs~~~v~~I--~VP~L~in 329 (409)
T KOG1838|consen 261 LKRIVL-RHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKK--------ASSSNYVDKI--KVPLLCIN 329 (409)
T ss_pred HHHHHh-hhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhh--------cchhhhcccc--cccEEEEe
Confidence 00000 0000011110000 001111111111111 111111111111 1134466777 99999999
Q ss_pred eCCCCCCCHHHHH-HHhcccCCceEEEeCCC-CCCCCCC----hHHHHHH-HHHHHHhh
Q 017180 320 TEGSPRRSKAEME-ALKGAKGVTKFVEVPGA-LLPQEEY----PAMVAQE-LYQFLQQT 371 (376)
Q Consensus 320 G~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~-H~~~~e~----pe~~~~~-i~~fl~~~ 371 (376)
..+|+++|.+..- .....+|++-+++-..| |..++|. +....+. +.+|+...
T Consensus 330 a~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 330 AADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNA 388 (409)
T ss_pred cCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHH
Confidence 9999999985433 33566788888877777 9988776 2334444 77777654
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.6e-15 Score=128.50 Aligned_cols=102 Identities=22% Similarity=0.236 Sum_probs=70.7
Q ss_pred CCcEEEecCCCCCccchHhHH---HHHHHHhhhCCcceEEEEeCCCCCcC-----CCC---------------CC-----
Q 017180 90 SKNILMIPTISDVSTVEEWRL---VAQDIVQRVGKVNWRATIVDWPGLGY-----SDR---------------PK----- 141 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~---~~~~L~~~~~~~~~~Vi~~D~~G~G~-----S~~---------------~~----- 141 (376)
-|+|+|+||++ ++...|.. +...+... |+.|+++|..++|. ++. +.
T Consensus 47 ~Pvv~~lHG~~--~~~~~~~~~~~~~~~~~~~----g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (283)
T PLN02442 47 VPVLYWLSGLT--CTDENFIQKSGAQRAAAAR----GIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWR 120 (283)
T ss_pred CCEEEEecCCC--cChHHHHHhhhHHHHHhhc----CeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccc
Confidence 67899999999 77766643 33455554 89999999887761 110 00
Q ss_pred -CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 142 -MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 142 -~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
..+-.+++.+.+..+.+.+. .++++|+||||||..|+.++.++|+++++++.++|.
T Consensus 121 ~~~~~~~~l~~~i~~~~~~~~------~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 121 MYDYVVKELPKLLSDNFDQLD------TSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred hhhhHHHHHHHHHHHHHHhcC------CCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 01112233333334334443 577999999999999999999999999999999884
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=7e-15 Score=141.67 Aligned_cols=238 Identities=16% Similarity=0.079 Sum_probs=147.0
Q ss_pred CccceEEeecCCceeEEEEecccCCCCC---CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC
Q 017180 62 KTGNWQWKFKENSINIYYEKHERESPDP---SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD 138 (376)
Q Consensus 62 ~~~~~~~~~~~~g~~l~y~~~g~~~~~~---~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~ 138 (376)
..+.+.+. ..+|.+++....-+.+.++ =|.||++||.+.......|...++.|+.+ ||.|+.+++||.+.-.
T Consensus 364 ~~e~~~~~-~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~----G~~V~~~n~RGS~GyG 438 (620)
T COG1506 364 EPEPVTYK-SNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASA----GYAVLAPNYRGSTGYG 438 (620)
T ss_pred CceEEEEE-cCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcC----CeEEEEeCCCCCCccH
Confidence 33444444 4568788776665543321 27899999998444445577778888887 9999999999765421
Q ss_pred -----CC---CCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCc
Q 017180 139 -----RP---KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPI 210 (376)
Q Consensus 139 -----~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~ 210 (376)
.. ......++..+.+. ++++.+ ....+++.++|||.||.+++..+.+.| .+++.+...+...
T Consensus 439 ~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~---~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~----- 508 (620)
T COG1506 439 REFADAIRGDWGGVDLEDLIAAVD-ALVKLP---LVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVD----- 508 (620)
T ss_pred HHHHHhhhhccCCccHHHHHHHHH-HHHhCC---CcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcch-----
Confidence 11 12345566655565 555544 233568999999999999999999888 6677666655210
Q ss_pred ccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhh
Q 017180 211 VFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLT 290 (376)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (376)
++. +... ....... ........ +.. ..+... .
T Consensus 509 -------------~~~------------~~~~-~~~~~~~-~~~~~~~~-~~~-~~~~~~---~---------------- 540 (620)
T COG1506 509 -------------WLL------------YFGE-STEGLRF-DPEENGGG-PPE-DREKYE---D---------------- 540 (620)
T ss_pred -------------hhh------------hccc-cchhhcC-CHHHhCCC-ccc-ChHHHH---h----------------
Confidence 000 0000 0000000 00000000 000 000000 0
Q ss_pred ccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHh----cccCCceEEEeCCC-CCCCC-CChHHHHHHH
Q 017180 291 GLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALK----GAKGVTKFVEVPGA-LLPQE-EYPAMVAQEL 364 (376)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~~~~~-H~~~~-e~pe~~~~~i 364 (376)
. .......++ ++|+|+|||++|..|+.+...++. ....+++++++|+. |.+.- ++-..+.+.+
T Consensus 541 ~---------sp~~~~~~i--~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~ 609 (620)
T COG1506 541 R---------SPIFYADNI--KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEI 609 (620)
T ss_pred c---------Chhhhhccc--CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHH
Confidence 0 022345567 999999999999999988877764 34557899999999 99655 5567789999
Q ss_pred HHHHHhhcC
Q 017180 365 YQFLQQTFE 373 (376)
Q Consensus 365 ~~fl~~~~~ 373 (376)
.+|+++.++
T Consensus 610 ~~~~~~~~~ 618 (620)
T COG1506 610 LDWFKRHLK 618 (620)
T ss_pred HHHHHHHhc
Confidence 999998764
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-15 Score=137.23 Aligned_cols=113 Identities=16% Similarity=0.207 Sum_probs=83.4
Q ss_pred CCcEEEecCCCCCccchHhHH-HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRL-VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~-~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+|++|+||||+.......|.. +...|..... +++||++|++|+|.|..+........+++++.++++.+........
T Consensus 41 ~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~--d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 41 TKTFIVIHGWTVTGMFESWVPKLVAALYEREP--SANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCeEEEECCCCcCCcchhhHHHHHHHHHhccC--CCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 689999999983222356765 5555542111 5999999999999987554334446777777777776521111236
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
++++||||||||.+|..++...|++|.++++++|..
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 789999999999999999999999999999999854
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.3e-14 Score=127.32 Aligned_cols=105 Identities=13% Similarity=0.071 Sum_probs=74.5
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH---HHHHHHhCCCC-CCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK---FVVDLINAPDS-PVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~---~l~~~l~~l~~-~~~ 165 (376)
.|+|||+||++ .+...|..++..|+++ ||.|+++|++|++.+.. ....++..+ .+.+.++.+.. ...
T Consensus 52 ~PvVv~lHG~~--~~~~~y~~l~~~Las~----G~~VvapD~~g~~~~~~---~~~i~d~~~~~~~l~~~l~~~l~~~~~ 122 (313)
T PLN00021 52 YPVLLFLHGYL--LYNSFYSQLLQHIASH----GFIVVAPQLYTLAGPDG---TDEIKDAAAVINWLSSGLAAVLPEGVR 122 (313)
T ss_pred CCEEEEECCCC--CCcccHHHHHHHHHhC----CCEEEEecCCCcCCCCc---hhhHHHHHHHHHHHHhhhhhhcccccc
Confidence 68899999999 8888899999999987 89999999999764321 122333222 22222212110 001
Q ss_pred CCCCcEEEEecchHHHHHHHHHHhCCC-----CcceEEEeccC
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKKNLV-----KPTAIAAVAPT 203 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~~p~-----~v~~lvl~~p~ 203 (376)
...++++++||||||.+++.+|.++++ +++++|+++|.
T Consensus 123 ~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 123 PDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred cChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 134689999999999999999998764 57889998883
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.62 E-value=8.7e-15 Score=122.83 Aligned_cols=197 Identities=16% Similarity=0.112 Sum_probs=114.6
Q ss_pred hHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC----CCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHH
Q 017180 108 WRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP----KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLT 183 (376)
Q Consensus 108 ~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~----~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia 183 (376)
|......|+++ ||.|+.+|+||.+..... ..........+|+.+.++.+........+++.++|+|+||.++
T Consensus 3 f~~~~~~la~~----Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a 78 (213)
T PF00326_consen 3 FNWNAQLLASQ----GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLA 78 (213)
T ss_dssp -SHHHHHHHTT----T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHH
T ss_pred eeHHHHHHHhC----CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEccccccccc
Confidence 33566788776 999999999998854311 0111112334444444444321112346789999999999999
Q ss_pred HHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCC
Q 017180 184 VRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDN 263 (376)
Q Consensus 184 ~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
+.++.++|++++++|..+|........ ..... +.. .... . +..+.
T Consensus 79 ~~~~~~~~~~f~a~v~~~g~~d~~~~~------------------~~~~~-----~~~----~~~~----~---~~~~~- 123 (213)
T PF00326_consen 79 LLAATQHPDRFKAAVAGAGVSDLFSYY------------------GTTDI-----YTK----AEYL----E---YGDPW- 123 (213)
T ss_dssp HHHHHHTCCGSSEEEEESE-SSTTCSB------------------HHTCC-----HHH----GHHH----H---HSSTT-
T ss_pred chhhcccceeeeeeeccceecchhccc------------------ccccc-----ccc----cccc----c---cCccc-
Confidence 999999999999999998843110000 00000 000 0000 0 00000
Q ss_pred CChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc--ccCCCcEEEEEeCCCCCCCHHHHHHHh----cc
Q 017180 264 VTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD--LEGKLPLLVVSTEGSPRRSKAEMEALK----GA 337 (376)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~Pvlii~G~~D~~~~~~~~~~~~----~~ 337 (376)
..++..... . ....+.+ + ++|+|++||++|..+|.+....+. +.
T Consensus 124 ~~~~~~~~~-s---------------------------~~~~~~~~~~--~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~ 173 (213)
T PF00326_consen 124 DNPEFYREL-S---------------------------PISPADNVQI--KPPVLIIHGENDPRVPPSQSLRLYNALRKA 173 (213)
T ss_dssp TSHHHHHHH-H---------------------------HGGGGGGCGG--GSEEEEEEETTBSSSTTHHHHHHHHHHHHT
T ss_pred hhhhhhhhh-c---------------------------cccccccccC--CCCEEEEccCCCCccCHHHHHHHHHHHHhc
Confidence 011111000 0 0011222 4 789999999999999988777663 34
Q ss_pred cCCceEEEeCCC-CCCC-CCChHHHHHHHHHHHHhhcC
Q 017180 338 KGVTKFVEVPGA-LLPQ-EEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 338 ~~~~~~~~~~~~-H~~~-~e~pe~~~~~i~~fl~~~~~ 373 (376)
..+++++++|++ |... .+...+..+.+.+|+++.++
T Consensus 174 g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 174 GKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp TSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 456899999999 9643 45566889999999998764
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.9e-14 Score=118.62 Aligned_cols=107 Identities=10% Similarity=-0.040 Sum_probs=71.5
Q ss_pred CCcEEEecCCCCCccchHhH---HHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CC---C--CCHHHHHHHHHHHHhCC
Q 017180 90 SKNILMIPTISDVSTVEEWR---LVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KM---D--YNADVMEKFVVDLINAP 160 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~---~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~---~--~~~~~~~~~l~~~l~~l 160 (376)
.|.||++||.+ .+...+. .+...+.+. ||.|+++|++|+|.+... .. . ........++.++++.+
T Consensus 13 ~P~vv~lHG~~--~~~~~~~~~~~~~~~a~~~----g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 86 (212)
T TIGR01840 13 RALVLALHGCG--QTASAYVIDWGWKAAADRY----GFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAV 86 (212)
T ss_pred CCEEEEeCCCC--CCHHHHhhhcChHHHHHhC----CeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHH
Confidence 67899999999 7666554 233344444 899999999999865421 00 0 00011223334444333
Q ss_pred CCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 161 DSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 161 ~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
........++++|+|||+||.+++.++.++|+.+.+++.+++
T Consensus 87 ~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g 128 (212)
T TIGR01840 87 KANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAG 128 (212)
T ss_pred HHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecC
Confidence 222222356899999999999999999999999999988876
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.56 E-value=9e-13 Score=113.44 Aligned_cols=111 Identities=14% Similarity=0.170 Sum_probs=92.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhh-CCcceEEEEeCCCCCcCCCCC------CCCCCHHHHHHHHHHHHhCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRV-GKVNWRATIVDWPGLGYSDRP------KMDYNADVMEKFVVDLINAPDS 162 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~-~~~~~~Vi~~D~~G~G~S~~~------~~~~~~~~~~~~l~~~l~~l~~ 162 (376)
+..||||+|++ +-...|..++..|.+.+ + ++.|+++.+.||-.++.. ...++.++..+--.++++++..
T Consensus 2 ~~li~~IPGNP--Glv~fY~~Fl~~L~~~l~~--~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 2 RPLIVFIPGNP--GLVEFYEEFLSALYEKLNP--QFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIP 77 (266)
T ss_pred cEEEEEECCCC--ChHHHHHHHHHHHHHhCCC--CCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhh
Confidence 45789999999 99999999999999763 3 799999999999877633 3688999998888888877753
Q ss_pred CCCCCCCcEEEEecchHHHHHHHHHHhCC---CCcceEEEeccCC
Q 017180 163 PVSSSESDLVIFGGGHAATLTVRAAKKNL---VKPTAIAAVAPTW 204 (376)
Q Consensus 163 ~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p---~~v~~lvl~~p~~ 204 (376)
+......+++++|||+|+.+++++..+.+ .+|.+++++-|+.
T Consensus 78 ~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 78 QKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred hhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 21113678999999999999999999998 8899999999864
|
|
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.6e-15 Score=127.90 Aligned_cols=109 Identities=17% Similarity=0.209 Sum_probs=78.2
Q ss_pred CCcEEEecCCCCCccc-hHhHH-HHHHH-HhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTV-EEWRL-VAQDI-VQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSS 166 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~-~~~~~-~~~~L-~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 166 (376)
+|++|+||||+ ++. ..|.. +...+ .+. +++||++|++|++.+..+....+.+..++++.++++.+......
T Consensus 36 ~p~vilIHG~~--~~~~~~~~~~l~~~ll~~~----~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~ 109 (275)
T cd00707 36 RPTRFIIHGWT--SSGEESWISDLRKAYLSRG----DYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGL 109 (275)
T ss_pred CCcEEEEcCCC--CCCCCcHHHHHHHHHHhcC----CCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCC
Confidence 67899999999 666 56644 34434 333 79999999999854433323344555556666666554211111
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
..+++++|||||||.+|..++.+.|++|.++++++|..
T Consensus 110 ~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 110 SLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred ChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 35789999999999999999999999999999999864
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.6e-13 Score=113.42 Aligned_cols=180 Identities=16% Similarity=0.098 Sum_probs=113.2
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcC---CCCCCC--------CCCHHHHHHHHHHHHh
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGY---SDRPKM--------DYNADVMEKFVVDLIN 158 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~---S~~~~~--------~~~~~~~~~~l~~~l~ 158 (376)
.|.||++|++. +-....+.+++.|++. ||.|+++|+-+-.. ++.... ....+...+++.+.++
T Consensus 14 ~~~Vvv~~d~~--G~~~~~~~~ad~lA~~----Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 87 (218)
T PF01738_consen 14 RPAVVVIHDIF--GLNPNIRDLADRLAEE----GYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVD 87 (218)
T ss_dssp EEEEEEE-BTT--BS-HHHHHHHHHHHHT----T-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCC--CCchHHHHHHHHHHhc----CCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 68899999988 6667778889999997 99999999754433 111110 0013455566655555
Q ss_pred CCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHH
Q 017180 159 APDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMM 238 (376)
Q Consensus 159 ~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (376)
.+........+++.++|+|+||.+++.+|.+. ..+++.|..-|..
T Consensus 88 ~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~---------------------------------- 132 (218)
T PF01738_consen 88 YLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGS---------------------------------- 132 (218)
T ss_dssp HHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SS----------------------------------
T ss_pred HHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCC----------------------------------
Confidence 54322112357899999999999999999876 5788888765410
Q ss_pred hhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEE
Q 017180 239 YNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVV 318 (376)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii 318 (376)
.. .. ......++ ++|++++
T Consensus 133 --~~---~~------------------------------------------------------~~~~~~~~--~~P~l~~ 151 (218)
T PF01738_consen 133 --PP---PP------------------------------------------------------PLEDAPKI--KAPVLIL 151 (218)
T ss_dssp --SG---GG------------------------------------------------------HHHHGGG----S-EEEE
T ss_pred --CC---Cc------------------------------------------------------chhhhccc--CCCEeec
Confidence 00 00 11233445 8999999
Q ss_pred EeCCCCCCCHHHHHHHh----cccCCceEEEeCCC-CCCCCCCh--------HHHHHHHHHHHHhh
Q 017180 319 STEGSPRRSKAEMEALK----GAKGVTKFVEVPGA-LLPQEEYP--------AMVAQELYQFLQQT 371 (376)
Q Consensus 319 ~G~~D~~~~~~~~~~~~----~~~~~~~~~~~~~~-H~~~~e~p--------e~~~~~i~~fl~~~ 371 (376)
+|++|+.++.+..+.+. +.....++++++++ |....... ++-.+.+.+||++.
T Consensus 152 ~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 152 FGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp EETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred CccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 99999999988655553 44578899999999 98655432 34566777888765
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=9.2e-13 Score=117.05 Aligned_cols=104 Identities=8% Similarity=-0.016 Sum_probs=72.8
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHH---HhCCCCCCC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDL---INAPDSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~---l~~l~~~~~ 165 (376)
.|.||++||.+.. ++...|..++..|++. .|+.|+++|+|...+..-| ...++..+.+..+ .+.++
T Consensus 81 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~---~g~~Vv~vdYrlape~~~p---~~~~D~~~a~~~l~~~~~~~~---- 150 (318)
T PRK10162 81 QATLFYLHGGGFILGNLDTHDRIMRLLASY---SGCTVIGIDYTLSPEARFP---QAIEEIVAVCCYFHQHAEDYG---- 150 (318)
T ss_pred CCEEEEEeCCcccCCCchhhhHHHHHHHHH---cCCEEEEecCCCCCCCCCC---CcHHHHHHHHHHHHHhHHHhC----
Confidence 5789999997632 4556788888888873 2799999999976543322 2344444443333 33343
Q ss_pred CCCCcEEEEecchHHHHHHHHHHhC------CCCcceEEEeccC
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKKN------LVKPTAIAAVAPT 203 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~~------p~~v~~lvl~~p~ 203 (376)
....+++|+|+|+||.+++.++.+. +.++.+++++.|.
T Consensus 151 ~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 194 (318)
T PRK10162 151 INMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGL 194 (318)
T ss_pred CChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCc
Confidence 1256899999999999999988742 3678999999874
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.8e-13 Score=127.77 Aligned_cols=123 Identities=15% Similarity=0.038 Sum_probs=88.5
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccch---Hh-HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVE---EW-RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADV 148 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~---~~-~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~ 148 (376)
||.+|++...-+...++.|+||++||++ .+.. .+ ......|.++ ||.|+++|+||+|.|+.....++ ..
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg--~~~~~~~~~~~~~~~~l~~~----Gy~vv~~D~RG~g~S~g~~~~~~-~~ 77 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYG--KDAGLRWGLDKTEPAWFVAQ----GYAVVIQDTRGRGASEGEFDLLG-SD 77 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCC--CchhhccccccccHHHHHhC----CcEEEEEeccccccCCCceEecC-cc
Confidence 4777875554332222368899999999 6542 12 2234566665 99999999999999985433333 45
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.++|+.++++.+..+. ....++.++|+|+||.+++.+|..+|+.++++|..++.
T Consensus 78 ~~~D~~~~i~~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~ 131 (550)
T TIGR00976 78 EAADGYDLVDWIAKQP-WCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGV 131 (550)
T ss_pred cchHHHHHHHHHHhCC-CCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcc
Confidence 6677777777664221 12468999999999999999999999999999988764
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.7e-14 Score=95.94 Aligned_cols=78 Identities=14% Similarity=0.266 Sum_probs=66.6
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKF 152 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~~ 152 (376)
|.+|+|+.+.++++ ++.+|+++||++ .++..|..+++.|++. ||.|+++|+||||+|+.. ....+.+++.+|
T Consensus 1 G~~L~~~~w~p~~~-~k~~v~i~HG~~--eh~~ry~~~a~~L~~~----G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D 73 (79)
T PF12146_consen 1 GTKLFYRRWKPENP-PKAVVVIVHGFG--EHSGRYAHLAEFLAEQ----GYAVFAYDHRGHGRSEGKRGHIDSFDDYVDD 73 (79)
T ss_pred CcEEEEEEecCCCC-CCEEEEEeCCcH--HHHHHHHHHHHHHHhC----CCEEEEECCCcCCCCCCcccccCCHHHHHHH
Confidence 56788888877654 366888889999 9999999999999997 999999999999999943 345688999999
Q ss_pred HHHHHh
Q 017180 153 VVDLIN 158 (376)
Q Consensus 153 l~~~l~ 158 (376)
+..+++
T Consensus 74 ~~~~~~ 79 (79)
T PF12146_consen 74 LHQFIQ 79 (79)
T ss_pred HHHHhC
Confidence 998874
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.1e-13 Score=117.87 Aligned_cols=215 Identities=16% Similarity=0.190 Sum_probs=116.2
Q ss_pred CCcEEEecCCCCCccchHhH-HHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWR-LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~-~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|+||++-|+- +....+. .+.+.|..+ |+.++++|.||.|.|..-....+.+.+-+.+.+.+.... .+..
T Consensus 190 ~P~VIv~gGlD--s~qeD~~~l~~~~l~~r----GiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p---~VD~ 260 (411)
T PF06500_consen 190 YPTVIVCGGLD--SLQEDLYRLFRDYLAPR----GIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRP---WVDH 260 (411)
T ss_dssp EEEEEEE--TT--S-GGGGHHHHHCCCHHC----T-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHST---TEEE
T ss_pred CCEEEEeCCcc--hhHHHHHHHHHHHHHhC----CCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCC---ccCh
Confidence 56667767777 6665544 444667776 999999999999999733232333455556666665553 2235
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHH
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKA 248 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (376)
.+|.++|.|+||.+|.++|..++.+++++|..+|. ...++.. + ..... .+..
T Consensus 261 ~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~----vh~~ft~-----------------~----~~~~~---~P~m 312 (411)
T PF06500_consen 261 TRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAP----VHHFFTD-----------------P----EWQQR---VPDM 312 (411)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES-------SCGGH------------------H----HHHTT---S-HH
T ss_pred hheEEEEeccchHHHHHHHHhcccceeeEeeeCch----Hhhhhcc-----------------H----HHHhc---CCHH
Confidence 68999999999999999999888999999999873 1211110 0 00000 0111
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHH--hcccCCCcEEEEEeCCCCCC
Q 017180 249 IQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLF--ADLEGKLPLLVVSTEGSPRR 326 (376)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~Pvlii~G~~D~~~ 326 (376)
....+....... ..+++.+...... ..+. ....+ .+. ++|+|.+.|++|+++
T Consensus 313 y~d~LA~rlG~~--~~~~~~l~~el~~---------------~SLk-------~qGlL~~rr~--~~plL~i~~~~D~v~ 366 (411)
T PF06500_consen 313 YLDVLASRLGMA--AVSDESLRGELNK---------------FSLK-------TQGLLSGRRC--PTPLLAINGEDDPVS 366 (411)
T ss_dssp HHHHHHHHCT-S--CE-HHHHHHHGGG---------------GSTT-------TTTTTTSS-B--SS-EEEEEETT-SSS
T ss_pred HHHHHHHHhCCc--cCCHHHHHHHHHh---------------cCcc-------hhccccCCCC--CcceEEeecCCCCCC
Confidence 111111111100 1111111110000 0000 00122 344 889999999999999
Q ss_pred CHHHHHHHhcccCCceEEEeCCC--CCCCCCChHHHHHHHHHHHHhh
Q 017180 327 SKAEMEALKGAKGVTKFVEVPGA--LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~--H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
|.+..+.+.....+.+...++.. |.-+ +.-...+.+||++.
T Consensus 367 P~eD~~lia~~s~~gk~~~~~~~~~~~gy----~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 367 PIEDSRLIAESSTDGKALRIPSKPLHMGY----PQALDEIYKWLEDK 409 (411)
T ss_dssp -HHHHHHHHHTBTT-EEEEE-SSSHHHHH----HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCceeecCCCccccch----HHHHHHHHHHHHHh
Confidence 99999988887777777777754 6544 24567788888765
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-12 Score=111.31 Aligned_cols=98 Identities=13% Similarity=0.248 Sum_probs=81.6
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcc-eEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVN-WRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~-~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
++|+|+|+.+ ++...|..+++.|.. . +.|++++++|.+.... ...+++++++...+.|.... ..+
T Consensus 1 ~~lf~~p~~g--G~~~~y~~la~~l~~-----~~~~v~~i~~~~~~~~~~--~~~si~~la~~y~~~I~~~~-----~~g 66 (229)
T PF00975_consen 1 RPLFCFPPAG--GSASSYRPLARALPD-----DVIGVYGIEYPGRGDDEP--PPDSIEELASRYAEAIRARQ-----PEG 66 (229)
T ss_dssp -EEEEESSTT--CSGGGGHHHHHHHTT-----TEEEEEEECSTTSCTTSH--EESSHHHHHHHHHHHHHHHT-----SSS
T ss_pred CeEEEEcCCc--cCHHHHHHHHHhCCC-----CeEEEEEEecCCCCCCCC--CCCCHHHHHHHHHHHhhhhC-----CCC
Confidence 3699999999 999999999999998 5 9999999999983332 34789999998888777765 345
Q ss_pred cEEEEecchHHHHHHHHHH---hCCCCcceEEEecc
Q 017180 170 DLVIFGGGHAATLTVRAAK---KNLVKPTAIAAVAP 202 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~---~~p~~v~~lvl~~p 202 (376)
+++|+|||+||.+|..+|. ..-..+..|+++++
T Consensus 67 p~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~ 102 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDS 102 (229)
T ss_dssp SEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESC
T ss_pred CeeehccCccHHHHHHHHHHHHHhhhccCceEEecC
Confidence 9999999999999999998 34456889999985
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-12 Score=120.33 Aligned_cols=104 Identities=10% Similarity=0.199 Sum_probs=82.4
Q ss_pred CCcEEEecCCCCCccchHh-----HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEW-----RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPV 164 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~-----~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~ 164 (376)
+.|||+++.+- ...+.+ +.++..|.++ ||+|+++|+++-+..+ ...+++++++.+.+.++.+...
T Consensus 215 ~~PLLIVPp~I--NK~YIlDL~P~~SlVr~lv~q----G~~VflIsW~nP~~~~---r~~~ldDYv~~i~~Ald~V~~~- 284 (560)
T TIGR01839 215 ARPLLVVPPQI--NKFYIFDLSPEKSFVQYCLKN----QLQVFIISWRNPDKAH---REWGLSTYVDALKEAVDAVRAI- 284 (560)
T ss_pred CCcEEEechhh--hhhheeecCCcchHHHHHHHc----CCeEEEEeCCCCChhh---cCCCHHHHHHHHHHHHHHHHHh-
Confidence 57899999988 666666 4788899887 9999999999977654 4578889888777766665211
Q ss_pred CCCCCcEEEEecchHHHHHHH----HHHhCCC-CcceEEEeccCC
Q 017180 165 SSSESDLVIFGGGHAATLTVR----AAKKNLV-KPTAIAAVAPTW 204 (376)
Q Consensus 165 ~~~~~~~~lvG~S~Gg~ia~~----~a~~~p~-~v~~lvl~~p~~ 204 (376)
...+++.++|+|+||.+++. +++++++ +|++++++....
T Consensus 285 -tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatpl 328 (560)
T TIGR01839 285 -TGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLL 328 (560)
T ss_pred -cCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeeccc
Confidence 02678999999999999997 7888886 799999886543
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.8e-13 Score=113.53 Aligned_cols=121 Identities=16% Similarity=0.248 Sum_probs=99.5
Q ss_pred cCCceeEEEEecccCCC---CCCCcEEEecCCCCCccchHhHHHHHHHHhh--hC-C--cceEEEEeCCCCCcCCCCCC-
Q 017180 71 KENSINIYYEKHERESP---DPSKNILMIPTISDVSTVEEWRLVAQDIVQR--VG-K--VNWRATIVDWPGLGYSDRPK- 141 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~---~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~--~~-~--~~~~Vi~~D~~G~G~S~~~~- 141 (376)
..+|++|||...-++.. +.-.||+++|||+ ++...|-.+++.|.+. .+ . --|.||++.+||||.|+.+.
T Consensus 130 eIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwP--Gsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk 207 (469)
T KOG2565|consen 130 EIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWP--GSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSK 207 (469)
T ss_pred hhcceeEEEEEecCCccccCCcccceEEecCCC--chHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCcc
Confidence 34599999977654422 2235899999999 9999999999999763 11 1 12899999999999999664
Q ss_pred CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEE
Q 017180 142 MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAA 199 (376)
Q Consensus 142 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl 199 (376)
...+....|..+..++=.++ -.++.|-|..||+.|+..+|..+|+.|.++=+
T Consensus 208 ~GFn~~a~ArvmrkLMlRLg------~nkffiqGgDwGSiI~snlasLyPenV~GlHl 259 (469)
T KOG2565|consen 208 TGFNAAATARVMRKLMLRLG------YNKFFIQGGDWGSIIGSNLASLYPENVLGLHL 259 (469)
T ss_pred CCccHHHHHHHHHHHHHHhC------cceeEeecCchHHHHHHHHHhhcchhhhHhhh
Confidence 57888899999999999998 78899999999999999999999999988644
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.1e-12 Score=108.46 Aligned_cols=179 Identities=17% Similarity=0.194 Sum_probs=102.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCC------CcC---CC------CCCC---CCCHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPG------LGY---SD------RPKM---DYNADVMEK 151 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G------~G~---S~------~~~~---~~~~~~~~~ 151 (376)
.+.|||+||+| ++...|..+...... .. +.+++.+.-|- .|. +- .+.. ...++..++
T Consensus 14 ~~lvi~LHG~G--~~~~~~~~~~~~~~~-~~--~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 14 KPLVILLHGYG--DSEDLFALLAELNLA-LP--NTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp SEEEEEE--TT--S-HHHHHHHHHHHTC-ST--TEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred ceEEEEECCCC--CCcchhHHHHhhccc-CC--ceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 67899999999 888777554442111 11 68888776542 232 11 0101 111222333
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
.+.++++..... ....+++++.|+|.||.+++.++.++|..+.++|.+++.. +.
T Consensus 89 ~l~~li~~~~~~-~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~----~~--------------------- 142 (216)
T PF02230_consen 89 RLDELIDEEVAY-GIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYL----PP--------------------- 142 (216)
T ss_dssp HHHHHHHHHHHT-T--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES-------TT---------------------
T ss_pred HHHHHHHHHHHc-CCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccc----cc---------------------
Confidence 444554432110 0246789999999999999999999999999999998731 00
Q ss_pred CchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccC
Q 017180 232 PGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEG 311 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 311 (376)
.. . .. .......
T Consensus 143 --------~~--~--------~~-------------------------------------------------~~~~~~~- 154 (216)
T PF02230_consen 143 --------ES--E--------LE-------------------------------------------------DRPEALA- 154 (216)
T ss_dssp --------GC--C--------CH-------------------------------------------------CCHCCCC-
T ss_pred --------cc--c--------cc-------------------------------------------------ccccccC-
Confidence 00 0 00 0001110
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHH----hcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEAL----KGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~----~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
++|++++||++|+++|.+..+.. ++...+++++.++++ |-.. .+..+.+.+||.+.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 56999999999999998766654 344557899999977 9764 45667788999875
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.8e-12 Score=103.61 Aligned_cols=237 Identities=12% Similarity=0.072 Sum_probs=130.7
Q ss_pred cEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC---CCCCHHHHHH-HHHHHHhCCCCCCCCC
Q 017180 92 NILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK---MDYNADVMEK-FVVDLINAPDSPVSSS 167 (376)
Q Consensus 92 ~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~---~~~~~~~~~~-~l~~~l~~l~~~~~~~ 167 (376)
.|+.--+.+ .....|++++..+.+. ||.|+.+|+||.|.|+... ..+...+++. |+.+.++.++... .
T Consensus 32 ~~~va~a~G--v~~~fYRrfA~~a~~~----Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~--~ 103 (281)
T COG4757 32 RLVVAGATG--VGQYFYRRFAAAAAKA----GFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKAL--P 103 (281)
T ss_pred cEEecccCC--cchhHhHHHHHHhhcc----CceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhC--C
Confidence 355556666 6677888899888887 9999999999999998543 2355555554 4555454443111 3
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEK 247 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (376)
..+...||||+||.+.-.+.+. + ++....... ...+--+++... .-+............+ .
T Consensus 104 ~~P~y~vgHS~GGqa~gL~~~~-~-k~~a~~vfG-~gagwsg~m~~~--------~~l~~~~l~~lv~p~l--------t 164 (281)
T COG4757 104 GHPLYFVGHSFGGQALGLLGQH-P-KYAAFAVFG-SGAGWSGWMGLR--------ERLGAVLLWNLVGPPL--------T 164 (281)
T ss_pred CCceEEeeccccceeecccccC-c-ccceeeEec-cccccccchhhh--------hcccceeeccccccch--------h
Confidence 7889999999999877666553 4 333333222 211111111000 0000000000000000 0
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCC
Q 017180 248 AIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRS 327 (376)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~ 327 (376)
.....+.+......+..+.............+... ..+-....+.+.++++ ++|++.+...+|+.+|
T Consensus 165 ~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~-----------fddp~~~~~~q~yaaV--rtPi~~~~~~DD~w~P 231 (281)
T COG4757 165 FWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYY-----------FDDPAMRNYRQVYAAV--RTPITFSRALDDPWAP 231 (281)
T ss_pred hccccCcHhhcCCCccCcchHHHHHHHHhcCcccc-----------ccChhHhHHHHHHHHh--cCceeeeccCCCCcCC
Confidence 00001111222212223222222222222211110 0000122256778888 9999999999999999
Q ss_pred HHHHHHHhcccCCceEEE--eC-----CCCCCCCCCh-HHHHHHHHHHH
Q 017180 328 KAEMEALKGAKGVTKFVE--VP-----GALLPQEEYP-AMVAQELYQFL 368 (376)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~--~~-----~~H~~~~e~p-e~~~~~i~~fl 368 (376)
....+.+.+..+|+.+.. ++ -||+-..-+| |.+.+.+++|+
T Consensus 232 ~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 232 PASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 999999987776655433 32 1399888887 88888888775
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.9e-11 Score=105.01 Aligned_cols=213 Identities=14% Similarity=0.066 Sum_probs=111.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcC-CCCC------C----CCCCH---------HHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGY-SDRP------K----MDYNA---------DVM 149 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~-S~~~------~----~~~~~---------~~~ 149 (376)
-|.||.+||.+ .....|...+..-.. ||-|+++|.||+|. |... . ..... ..+
T Consensus 83 ~Pavv~~hGyg--~~~~~~~~~~~~a~~-----G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~ 155 (320)
T PF05448_consen 83 LPAVVQFHGYG--GRSGDPFDLLPWAAA-----GYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRV 155 (320)
T ss_dssp EEEEEEE--TT----GGGHHHHHHHHHT-----T-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHH
T ss_pred cCEEEEecCCC--CCCCCcccccccccC-----CeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHH
Confidence 57889999999 877777665554444 99999999999993 3211 0 01111 122
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhh
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (376)
..|....++.+.....+..+++.+.|.|.||.+++.+|+-.+ +|++++...|.... ....+....
T Consensus 156 ~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d--------------~~~~~~~~~ 220 (320)
T PF05448_consen 156 YLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD--------------FRRALELRA 220 (320)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS--------------HHHHHHHT-
T ss_pred HHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc--------------hhhhhhcCC
Confidence 334433333322222234678999999999999999999765 69999999885311 000000000
Q ss_pred -ccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 230 -RAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 230 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
..+. ..+..++... ....+..+...+.+ .+.+ .....++
T Consensus 221 ~~~~y-------------~~~~~~~~~~------d~~~~~~~~v~~~L--------------~Y~D-------~~nfA~r 260 (320)
T PF05448_consen 221 DEGPY-------------PEIRRYFRWR------DPHHEREPEVFETL--------------SYFD-------AVNFARR 260 (320)
T ss_dssp -STTT-------------HHHHHHHHHH------SCTHCHHHHHHHHH--------------HTT--------HHHHGGG
T ss_pred ccccH-------------HHHHHHHhcc------CCCcccHHHHHHHH--------------hhhh-------HHHHHHH
Confidence 0000 0111111100 00000000000000 1111 4556677
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhcccC-CceEEEeCCC-CCCCCCChHHH-HHHHHHHHHh
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKGAKG-VTKFVEVPGA-LLPQEEYPAMV-AQELYQFLQQ 370 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~-H~~~~e~pe~~-~~~i~~fl~~ 370 (376)
| +||+++-.|-.|.++|+...-.....++ .+++++++.. |-.. .++ .+...+||.+
T Consensus 261 i--~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~----~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 261 I--KCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYG----PEFQEDKQLNFLKE 319 (320)
T ss_dssp ----SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTT----HHHHHHHHHHHHHH
T ss_pred c--CCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCch----hhHHHHHHHHHHhc
Confidence 8 9999999999999999988887765544 6889999988 7543 334 6778888875
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.5e-11 Score=97.92 Aligned_cols=87 Identities=15% Similarity=0.167 Sum_probs=64.5
Q ss_pred EEEecCCCCCccchH--hHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 93 ILMIPTISDVSTVEE--WRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 93 vvllHG~~~~~~~~~--~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
|++|||+. ++... ...+.+.+.+... ..+++++|++ ...+...+.+.+++++.. .+.
T Consensus 2 ilYlHGF~--Ssp~S~Ka~~l~~~~~~~~~--~~~~~~p~l~-----------~~p~~a~~~l~~~i~~~~------~~~ 60 (187)
T PF05728_consen 2 ILYLHGFN--SSPQSFKAQALKQYFAEHGP--DIQYPCPDLP-----------PFPEEAIAQLEQLIEELK------PEN 60 (187)
T ss_pred eEEecCCC--CCCCCHHHHHHHHHHHHhCC--CceEECCCCC-----------cCHHHHHHHHHHHHHhCC------CCC
Confidence 89999999 65544 3445566666411 3567777776 345667788888998886 555
Q ss_pred EEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 171 LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
+.|||.||||..|..+|.+++. .+ ||++|.
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~--~a-vLiNPa 90 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGL--PA-VLINPA 90 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCC--CE-EEEcCC
Confidence 9999999999999999998753 33 999995
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.41 E-value=9.4e-12 Score=96.90 Aligned_cols=171 Identities=15% Similarity=0.158 Sum_probs=111.3
Q ss_pred CCcEEEecCCC---CCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHHHHHHHHHhCCCCCC
Q 017180 90 SKNILMIPTIS---DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKFVVDLINAPDSPV 164 (376)
Q Consensus 90 ~~~vvllHG~~---~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~~~l~~~l~~l~~~~ 164 (376)
.|..|.+|--+ ++.+...-..++..|.++ ||.++.||+||-|+|...- ..-..++....+ +++++..
T Consensus 28 ~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~----G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aal-dW~~~~h--- 99 (210)
T COG2945 28 APIALICHPHPLFGGTMNNKVVQTLARALVKR----GFATLRFNFRGVGRSQGEFDNGIGELEDAAAAL-DWLQARH--- 99 (210)
T ss_pred CceEEecCCCccccCccCCHHHHHHHHHHHhC----CceEEeecccccccccCcccCCcchHHHHHHHH-HHHHhhC---
Confidence 45556666533 224444555667777776 9999999999999998542 122233333333 3333332
Q ss_pred CCCCCc-EEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhh
Q 017180 165 SSSESD-LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLV 243 (376)
Q Consensus 165 ~~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (376)
...+ ..+.|+|+|+.|++.+|.+.|+. ...+.+.|..
T Consensus 100 --p~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~--------------------------------------- 137 (210)
T COG2945 100 --PDSASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPI--------------------------------------- 137 (210)
T ss_pred --CCchhhhhcccchHHHHHHHHHHhcccc-cceeeccCCC---------------------------------------
Confidence 2333 36789999999999999997753 3344443310
Q ss_pred ccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCC
Q 017180 244 SNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGS 323 (376)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D 323 (376)
. ... + ..+... .+|.++|+|+.|
T Consensus 138 -~--~~d-f---------------------------------------------------s~l~P~--P~~~lvi~g~~D 160 (210)
T COG2945 138 -N--AYD-F---------------------------------------------------SFLAPC--PSPGLVIQGDAD 160 (210)
T ss_pred -C--chh-h---------------------------------------------------hhccCC--CCCceeEecChh
Confidence 0 000 0 001111 779999999999
Q ss_pred CCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 324 PRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
.+++.+..-++.+. ...++++++++ ||.+-.-. .+.+.|.+||.
T Consensus 161 dvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~gKl~-~l~~~i~~~l~ 205 (210)
T COG2945 161 DVVDLVAVLKWQES-IKITVITIPGADHFFHGKLI-ELRDTIADFLE 205 (210)
T ss_pred hhhcHHHHHHhhcC-CCCceEEecCCCceecccHH-HHHHHHHHHhh
Confidence 99888777777665 45678899999 99776654 58999999995
|
|
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.1e-12 Score=122.81 Aligned_cols=111 Identities=14% Similarity=0.024 Sum_probs=82.5
Q ss_pred CceeEEEEecccCC-----C-CCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC------
Q 017180 73 NSINIYYEKHERES-----P-DPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP------ 140 (376)
Q Consensus 73 ~g~~l~y~~~g~~~-----~-~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~------ 140 (376)
++.++.|...|.+. + ...|+|||+||++ ++...|..++..|.+. ||+|+++|+||||+|...
T Consensus 426 ~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~--g~~~~~~~lA~~La~~----Gy~VIaiDlpGHG~S~~~~~~~~~ 499 (792)
T TIGR03502 426 NGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGIT--GAKENALAFAGTLAAA----GVATIAIDHPLHGARSFDANASGV 499 (792)
T ss_pred CcchhhhhhcccccccccCCCCCCcEEEEeCCCC--CCHHHHHHHHHHHHhC----CcEEEEeCCCCCCccccccccccc
Confidence 35555665554431 1 1135899999999 9999999999999875 999999999999999421
Q ss_pred ----CC-------------CCCHHHHHHHHHHHHhCCC------CC----CCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 141 ----KM-------------DYNADVMEKFVVDLINAPD------SP----VSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 141 ----~~-------------~~~~~~~~~~l~~~l~~l~------~~----~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
.. +.++.+.+.|+..+...+. .+ ......+++++||||||.+++.++..
T Consensus 500 ~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 500 NATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 11 1367888888888777664 11 01235689999999999999999884
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.38 E-value=9.9e-12 Score=99.17 Aligned_cols=154 Identities=13% Similarity=0.191 Sum_probs=97.4
Q ss_pred EEEecCCCCCccchHhHHHH-HHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcE
Q 017180 93 ILMIPTISDVSTVEEWRLVA-QDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDL 171 (376)
Q Consensus 93 vvllHG~~~~~~~~~~~~~~-~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~ 171 (376)
|+++||++++.. .+|.... ..|.+ .++|-.+|+ +. .+.++|.+.+.+.+... .+++
T Consensus 1 v~IvhG~~~s~~-~HW~~wl~~~l~~-----~~~V~~~~~------~~----P~~~~W~~~l~~~i~~~-------~~~~ 57 (171)
T PF06821_consen 1 VLIVHGYGGSPP-DHWQPWLERQLEN-----SVRVEQPDW------DN----PDLDEWVQALDQAIDAI-------DEPT 57 (171)
T ss_dssp EEEE--TTSSTT-TSTHHHHHHHHTT-----SEEEEEC--------TS------HHHHHHHHHHCCHC--------TTTE
T ss_pred CEEeCCCCCCCc-cHHHHHHHHhCCC-----CeEEecccc------CC----CCHHHHHHHHHHHHhhc-------CCCe
Confidence 688999994433 5665543 33333 488888777 22 35678888888877775 5679
Q ss_pred EEEecchHHHHHHHHH-HhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHH
Q 017180 172 VIFGGGHAATLTVRAA-KKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQ 250 (376)
Q Consensus 172 ~lvG~S~Gg~ia~~~a-~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (376)
++||||+|+..+++++ .....+|.+++|++|.... ... .....
T Consensus 58 ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~---------------------------------~~~-~~~~~-- 101 (171)
T PF06821_consen 58 ILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPD---------------------------------DPE-PFPPE-- 101 (171)
T ss_dssp EEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCG---------------------------------CHH-CCTCG--
T ss_pred EEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcc---------------------------------ccc-chhhh--
Confidence 9999999999999999 7788899999999984200 000 00000
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHH
Q 017180 251 SQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAE 330 (376)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~ 330 (376)
. ..+. . . -...+ .+|.++|.+++|+++|.+.
T Consensus 102 ---~-~~f~----------------------------------~-------~--p~~~l--~~~~~viaS~nDp~vp~~~ 132 (171)
T PF06821_consen 102 ---L-DGFT----------------------------------P-------L--PRDPL--PFPSIVIASDNDPYVPFER 132 (171)
T ss_dssp ---G-CCCT----------------------------------T-------S--HCCHH--HCCEEEEEETTBSSS-HHH
T ss_pred ---c-cccc----------------------------------c-------C--ccccc--CCCeEEEEcCCCCccCHHH
Confidence 0 0000 0 0 00112 5688999999999999999
Q ss_pred HHHHhcccCCceEEEeCCC-CCCCCC
Q 017180 331 MEALKGAKGVTKFVEVPGA-LLPQEE 355 (376)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~-H~~~~e 355 (376)
.+++++.. +++++.++++ |+.-.+
T Consensus 133 a~~~A~~l-~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 133 AQRLAQRL-GAELIILGGGGHFNAAS 157 (171)
T ss_dssp HHHHHHHH-T-EEEEETS-TTSSGGG
T ss_pred HHHHHHHc-CCCeEECCCCCCccccc
Confidence 99998877 6889999998 996554
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.33 E-value=4e-11 Score=102.10 Aligned_cols=104 Identities=16% Similarity=0.162 Sum_probs=62.9
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCC----CCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWP----GLGYSDRPKMDYNADVMEKFVVDLINAPDSPV 164 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~----G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~ 164 (376)
...||||.|++.. .+......+++.|.+. +|.|+-+-++ |+|- .+++.-++||.++++.+....
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~----~wsl~q~~LsSSy~G~G~-------~SL~~D~~eI~~~v~ylr~~~ 101 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEET----GWSLFQVQLSSSYSGWGT-------SSLDRDVEEIAQLVEYLRSEK 101 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-T----T-EEEEE--GGGBTTS-S---------HHHHHHHHHHHHHHHHHHS
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccC----CeEEEEEEecCccCCcCc-------chhhhHHHHHHHHHHHHHHhh
Confidence 4579999999843 2334455667777554 8999998765 4554 356667777777776553110
Q ss_pred C--CCCCcEEEEecchHHHHHHHHHHhC-----CCCcceEEEeccCC
Q 017180 165 S--SSESDLVIFGGGHAATLTVRAAKKN-----LVKPTAIAAVAPTW 204 (376)
Q Consensus 165 ~--~~~~~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~p~~ 204 (376)
. ...++|+|+|||.|+.-+++|.... ...|++.||-+|..
T Consensus 102 ~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVS 148 (303)
T PF08538_consen 102 GGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVS 148 (303)
T ss_dssp ------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE--
T ss_pred ccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCC
Confidence 0 0256899999999999999998843 26799999999854
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.1e-10 Score=91.18 Aligned_cols=225 Identities=11% Similarity=0.121 Sum_probs=112.2
Q ss_pred CceeEEEEecccCCC--CCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC-cCCCCCCCCCCHHHH
Q 017180 73 NSINIYYEKHERESP--DPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-GYSDRPKMDYNADVM 149 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~--~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~-G~S~~~~~~~~~~~~ 149 (376)
+|.+|+..+.-+.+. +..++||+..|++ ....+|..++.+|+.. ||+||.+|--.| |.|+..-..++++..
T Consensus 11 ~~~~I~vwet~P~~~~~~~~~tiliA~Gf~--rrmdh~agLA~YL~~N----GFhViRyDsl~HvGlSsG~I~eftms~g 84 (294)
T PF02273_consen 11 DGRQIRVWETRPKNNEPKRNNTILIAPGFA--RRMDHFAGLAEYLSAN----GFHVIRYDSLNHVGLSSGDINEFTMSIG 84 (294)
T ss_dssp TTEEEEEEEE---TTS---S-EEEEE-TT---GGGGGGHHHHHHHHTT----T--EEEE---B-------------HHHH
T ss_pred CCCEEEEeccCCCCCCcccCCeEEEecchh--HHHHHHHHHHHHHhhC----CeEEEeccccccccCCCCChhhcchHHh
Confidence 466777666554433 2247889999999 9999999999999997 999999997776 999977788999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhh
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (376)
.+++..+++.+..+ ...++-|+.-|+.|.+|...|.+- .+.-+|...+.. ..+..+.+.+
T Consensus 85 ~~sL~~V~dwl~~~---g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVV---------------nlr~TLe~al 144 (294)
T PF02273_consen 85 KASLLTVIDWLATR---GIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVV---------------NLRDTLEKAL 144 (294)
T ss_dssp HHHHHHHHHHHHHT---T---EEEEEETTHHHHHHHHTTTS----SEEEEES--S----------------HHHHHHHHH
T ss_pred HHHHHHHHHHHHhc---CCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeee---------------eHHHHHHHHh
Confidence 99988776665421 267799999999999999999853 466777665411 0111111111
Q ss_pred ccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChH-HHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 230 RAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPG-IVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
..-.++..... +....-.....+..+ ++..+ +....+ +.+...+.++.
T Consensus 145 ~~Dyl~~~i~~------------lp~dldfeGh~l~~~vFv~dc----------------~e~~w~---~l~ST~~~~k~ 193 (294)
T PF02273_consen 145 GYDYLQLPIEQ------------LPEDLDFEGHNLGAEVFVTDC----------------FEHGWD---DLDSTINDMKR 193 (294)
T ss_dssp SS-GGGS-GGG--------------SEEEETTEEEEHHHHHHHH----------------HHTT-S---SHHHHHHHHTT
T ss_pred ccchhhcchhh------------CCCcccccccccchHHHHHHH----------------HHcCCc---cchhHHHHHhh
Confidence 11111100000 000000000000000 00111 111111 33335566778
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhc--ccCCceEEEeCCC-CCCCCCCh
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKG--AKGVTKFVEVPGA-LLPQEEYP 357 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~--~~~~~~~~~~~~~-H~~~~e~p 357 (376)
+ .+|++.+++++|.++.......+.. ..+.++++.++|+ |-+. |+|
T Consensus 194 l--~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~-enl 242 (294)
T PF02273_consen 194 L--SIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG-ENL 242 (294)
T ss_dssp ----S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT-SSH
T ss_pred C--CCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh-hCh
Confidence 8 9999999999999999888887765 3456889999999 9865 344
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.5e-10 Score=103.88 Aligned_cols=100 Identities=10% Similarity=0.214 Sum_probs=78.8
Q ss_pred CcEEEecCCCCCccchHh-HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 91 KNILMIPTISDVSTVEEW-RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~-~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
|+||++.-+. +..... +.+++.|.+ |+.|+..|+.--+..+.....++++++++-+.+++++++ .+
T Consensus 103 ~pvLiV~Pl~--g~~~~L~RS~V~~Ll~-----g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G------~~ 169 (406)
T TIGR01849 103 PAVLIVAPMS--GHYATLLRSTVEALLP-----DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLG------PD 169 (406)
T ss_pred CcEEEEcCCc--hHHHHHHHHHHHHHhC-----CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhC------CC
Confidence 7899998877 544433 456666666 999999999988765444567899999999999999986 44
Q ss_pred cEEEEecchHHHHHHHHHHh-----CCCCcceEEEeccCC
Q 017180 170 DLVIFGGGHAATLTVRAAKK-----NLVKPTAIAAVAPTW 204 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~-----~p~~v~~lvl~~p~~ 204 (376)
++++|+++||..++.+++. .|.++++++++.+..
T Consensus 170 -v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PI 208 (406)
T TIGR01849 170 -IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPI 208 (406)
T ss_pred -CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCc
Confidence 9999999999998776663 367899999987644
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.1e-10 Score=94.48 Aligned_cols=181 Identities=14% Similarity=0.107 Sum_probs=128.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC-cCCC-CCC------C----CCCHHHHHHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-GYSD-RPK------M----DYNADVMEKFVVDLI 157 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~-G~S~-~~~------~----~~~~~~~~~~l~~~l 157 (376)
.|.||++|++. +-....+.+...|++. ||-|+++|+-+. |.+. ... . ..+..+...|+.+.+
T Consensus 27 ~P~VIv~hei~--Gl~~~i~~~a~rlA~~----Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~ 100 (236)
T COG0412 27 FPGVIVLHEIF--GLNPHIRDVARRLAKA----GYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAAL 100 (236)
T ss_pred CCEEEEEeccc--CCchHHHHHHHHHHhC----CcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHH
Confidence 37899999999 7778999999999997 999999998763 4333 110 0 122356667777777
Q ss_pred hCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhH
Q 017180 158 NAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWM 237 (376)
Q Consensus 158 ~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (376)
+.+..+.....+++.++|+||||.+++.++.+.| .+++.+..-|....
T Consensus 101 ~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~------------------------------- 148 (236)
T COG0412 101 DYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIA------------------------------- 148 (236)
T ss_pred HHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCC-------------------------------
Confidence 7664222234678999999999999999999887 67888776552100
Q ss_pred HhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEE
Q 017180 238 MYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLV 317 (376)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvli 317 (376)
.. .....++ ++|+|+
T Consensus 149 --~~-------------------------------------------------------------~~~~~~~--~~pvl~ 163 (236)
T COG0412 149 --DD-------------------------------------------------------------TADAPKI--KVPVLL 163 (236)
T ss_pred --Cc-------------------------------------------------------------ccccccc--cCcEEE
Confidence 00 0001233 899999
Q ss_pred EEeCCCCCCCHHHHHHHhcc----cCCceEEEeCCC-CCCCCCC-----------hHHHHHHHHHHHHhhcC
Q 017180 318 VSTEGSPRRSKAEMEALKGA----KGVTKFVEVPGA-LLPQEEY-----------PAMVAQELYQFLQQTFE 373 (376)
Q Consensus 318 i~G~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~-H~~~~e~-----------pe~~~~~i~~fl~~~~~ 373 (376)
++|+.|..++....+.+.+. ...+++.+++++ |..+.+. .+.-.+.+.+|+++.+.
T Consensus 164 ~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 164 HLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred EecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999998877766533 236788999999 9876442 23457788889888764
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.8e-11 Score=97.45 Aligned_cols=171 Identities=13% Similarity=0.103 Sum_probs=110.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCC--CCcCC----CCCCCCCCHHH-------HHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWP--GLGYS----DRPKMDYNADV-------MEKFVVDL 156 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~--G~G~S----~~~~~~~~~~~-------~~~~l~~~ 156 (376)
.|.||++||+| ++...+-+....+.. ++.++.+-=+ -.|.- ......++.++ +++.+...
T Consensus 18 ~~~iilLHG~G--gde~~~~~~~~~~~P-----~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~ 90 (207)
T COG0400 18 APLLILLHGLG--GDELDLVPLPELILP-----NATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEEL 90 (207)
T ss_pred CcEEEEEecCC--CChhhhhhhhhhcCC-----CCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHH
Confidence 56799999999 888888775555554 5666654211 01100 01112233333 33334444
Q ss_pred HhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhh
Q 017180 157 INAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGW 236 (376)
Q Consensus 157 l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (376)
.++.+ ....+++++|+|-|+.+++.+..++|..++++|+.+|...
T Consensus 91 ~~~~g----i~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~------------------------------- 135 (207)
T COG0400 91 AEEYG----IDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLP------------------------------- 135 (207)
T ss_pred HHHhC----CChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCC-------------------------------
Confidence 44444 3457899999999999999999999999999999987310
Q ss_pred HHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEE
Q 017180 237 MMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLL 316 (376)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvl 316 (376)
. . .. . ...++ ..|++
T Consensus 136 -----~-~-~~------~------------------------------------------------~~~~~----~~pil 150 (207)
T COG0400 136 -----L-E-PE------L------------------------------------------------LPDLA----GTPIL 150 (207)
T ss_pred -----C-C-Cc------c------------------------------------------------ccccC----CCeEE
Confidence 0 0 00 0 00011 67999
Q ss_pred EEEeCCCCCCCHHHHHHHhc----ccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhh
Q 017180 317 VVSTEGSPRRSKAEMEALKG----AKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 317 ii~G~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
++||+.|+++|.....++.+ ..-+++++.+++||-...| -.+.+.+|+.+.
T Consensus 151 l~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i~~e----~~~~~~~wl~~~ 205 (207)
T COG0400 151 LSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIPPE----ELEAARSWLANT 205 (207)
T ss_pred EeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcCCHH----HHHHHHHHHHhc
Confidence 99999999999887777653 3457888899866876543 445566687764
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.3e-11 Score=97.65 Aligned_cols=215 Identities=20% Similarity=0.238 Sum_probs=127.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC----CC-----------------CCCCHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR----PK-----------------MDYNADV 148 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~----~~-----------------~~~~~~~ 148 (376)
-|.||-.||++ +....|......-.. ||.|+.+|-||.|.|+. +. ..|-...
T Consensus 83 ~P~vV~fhGY~--g~~g~~~~~l~wa~~-----Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~ 155 (321)
T COG3458 83 LPAVVQFHGYG--GRGGEWHDMLHWAVA-----GYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRG 155 (321)
T ss_pred cceEEEEeecc--CCCCCcccccccccc-----ceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEee
Confidence 67888889999 888888776655555 99999999999998832 11 1111222
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
...|+..+++.+-.-..+..+++.+.|.|.||.+++.++.-.| ++++++.+-|.... .+ +++...
T Consensus 156 v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~d-f~-------------r~i~~~ 220 (321)
T COG3458 156 VFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSD-FP-------------RAIELA 220 (321)
T ss_pred ehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccccccccc-ch-------------hheeec
Confidence 3334444444433222345788999999999999999988655 78999988875311 00 011000
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
...+ -..+..++... .+.. +..++.+ ++ .+ +.....+
T Consensus 221 ~~~~-------------ydei~~y~k~h--------~~~e-~~v~~TL----------~y----fD-------~~n~A~R 257 (321)
T COG3458 221 TEGP-------------YDEIQTYFKRH--------DPKE-AEVFETL----------SY----FD-------IVNLAAR 257 (321)
T ss_pred ccCc-------------HHHHHHHHHhc--------CchH-HHHHHHH----------hh----hh-------hhhHHHh
Confidence 0000 11111111110 0000 0000000 00 11 4445566
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhcccC-CceEEEeCCCCCCCCCChHHHHHHHHHHHHhhcC
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKGAKG-VTKFVEVPGALLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
+ ++|+|+..|--|+++|+...-.+.++.+ ..++.+++.- .|++-|.-..+.+..|++....
T Consensus 258 i--K~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~--aHe~~p~~~~~~~~~~l~~l~~ 319 (321)
T COG3458 258 I--KVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYF--AHEGGPGFQSRQQVHFLKILFG 319 (321)
T ss_pred h--ccceEEeecccCCCCCChhhHHHhhcccCCceEEEeecc--ccccCcchhHHHHHHHHHhhcc
Confidence 7 9999999999999999887776665554 4556666653 2455566566668888887654
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.4e-11 Score=127.41 Aligned_cols=99 Identities=8% Similarity=0.071 Sum_probs=86.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+++++|+||++ ++...|..+...|.. +++|+++|+||+|.+. ...++++++++++.+.++.+. ...
T Consensus 1068 ~~~l~~lh~~~--g~~~~~~~l~~~l~~-----~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~-----~~~ 1133 (1296)
T PRK10252 1068 GPTLFCFHPAS--GFAWQFSVLSRYLDP-----QWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQ-----PHG 1133 (1296)
T ss_pred CCCeEEecCCC--CchHHHHHHHHhcCC-----CCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhC-----CCC
Confidence 57899999999 999999999999987 7999999999998663 345899999999999998865 356
Q ss_pred cEEEEecchHHHHHHHHHHh---CCCCcceEEEecc
Q 017180 170 DLVIFGGGHAATLTVRAAKK---NLVKPTAIAAVAP 202 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~---~p~~v~~lvl~~p 202 (376)
+++++||||||.+|..+|.+ .++++..++++++
T Consensus 1134 p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1134 PYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred CEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 89999999999999999984 6788999999876
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.1e-09 Score=82.55 Aligned_cols=180 Identities=13% Similarity=0.173 Sum_probs=124.3
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC-----cCCCCCCC-CCCHHHHHHHHHHHHhCCCCCC
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-----GYSDRPKM-DYNADVMEKFVVDLINAPDSPV 164 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~-----G~S~~~~~-~~~~~~~~~~l~~~l~~l~~~~ 164 (376)
-+|||-||.++...+.....++..|+.+ |+.|..|+++-. |.-.+|+. ..--..+...+.++...+.
T Consensus 15 ~tilLaHGAGasmdSt~m~~~a~~la~~----G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~--- 87 (213)
T COG3571 15 VTILLAHGAGASMDSTSMTAVAAALARR----GWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLA--- 87 (213)
T ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHhC----ceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhccc---
Confidence 3677889999667777888999999987 999999998743 32222322 2233467777788888775
Q ss_pred CCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhc
Q 017180 165 SSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVS 244 (376)
Q Consensus 165 ~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (376)
..+.++=|+||||.++..+|......|++|++++=.+ ..+ .
T Consensus 88 ---~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPf-------------------------hpp-----------G 128 (213)
T COG3571 88 ---EGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPF-------------------------HPP-----------G 128 (213)
T ss_pred ---CCceeeccccccchHHHHHHHhhcCCcceEEEecCcc-------------------------CCC-----------C
Confidence 7799999999999999999997666688988875210 000 0
Q ss_pred cHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCC
Q 017180 245 NEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSP 324 (376)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~ 324 (376)
.++.++ .+.+..| +.|+||.+|+.|+
T Consensus 129 KPe~~R----------------------------------------------------t~HL~gl--~tPtli~qGtrD~ 154 (213)
T COG3571 129 KPEQLR----------------------------------------------------TEHLTGL--KTPTLITQGTRDE 154 (213)
T ss_pred Ccccch----------------------------------------------------hhhccCC--CCCeEEeeccccc
Confidence 011111 2245556 8999999999999
Q ss_pred CCCHHHHHHHhcccCCceEEEeCCC-CCCCC----------CChHHHHHHHHHHHHhh
Q 017180 325 RRSKAEMEALKGAKGVTKFVEVPGA-LLPQE----------EYPAMVAQELYQFLQQT 371 (376)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~----------e~pe~~~~~i~~fl~~~ 371 (376)
+-..+....+ ...+..++++++++ |-+-- ++-...++.|..|+.++
T Consensus 155 fGtr~~Va~y-~ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 155 FGTRDEVAGY-ALSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARRL 211 (213)
T ss_pred ccCHHHHHhh-hcCCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhhc
Confidence 8876655332 23456899999999 96432 22345577777787664
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.1e-09 Score=104.72 Aligned_cols=125 Identities=14% Similarity=0.049 Sum_probs=89.1
Q ss_pred cCCceeEEE-EecccC--CCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC--------
Q 017180 71 KENSINIYY-EKHERE--SPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR-------- 139 (376)
Q Consensus 71 ~~~g~~l~y-~~~g~~--~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~-------- 139 (376)
..||.+|.+ ....+. ..++.|.||++||..+......|......|.++ ||-|+.++.||-|+=.+
T Consensus 423 s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~r----G~~v~~~n~RGs~g~G~~w~~~g~~ 498 (686)
T PRK10115 423 ARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDR----GFVYAIVHVRGGGELGQQWYEDGKF 498 (686)
T ss_pred CCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHC----CcEEEEEEcCCCCccCHHHHHhhhh
Confidence 456777765 222111 112268889999977444444566666777776 99999999999765431
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 140 PKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 140 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.....+++++.+.+..++++- .....++.+.|.|.||.++..++.++|++++++|...|.
T Consensus 499 ~~k~~~~~D~~a~~~~Lv~~g----~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~ 558 (686)
T PRK10115 499 LKKKNTFNDYLDACDALLKLG----YGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPF 558 (686)
T ss_pred hcCCCcHHHHHHHHHHHHHcC----CCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCc
Confidence 113356777777777776653 234678999999999999999999999999999998884
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.8e-09 Score=93.99 Aligned_cols=124 Identities=14% Similarity=0.054 Sum_probs=76.3
Q ss_pred CceeEEEEeccc--CCCCCCCcEEEecCCCCCccc-hHhHHH---------HHHHHhhhCCcceEEEEeCCCCCcCCCCC
Q 017180 73 NSINIYYEKHER--ESPDPSKNILMIPTISDVSTV-EEWRLV---------AQDIVQRVGKVNWRATIVDWPGLGYSDRP 140 (376)
Q Consensus 73 ~g~~l~y~~~g~--~~~~~~~~vvllHG~~~~~~~-~~~~~~---------~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~ 140 (376)
||++|+....-+ ...++-|+||..|+++ ... ...... ...+.++ ||-|+..|.||.|.|+..
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~--~~~~~~~~~~~~~~~~~~~~~~~~~~----GY~vV~~D~RG~g~S~G~ 74 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYG--KGDQTASDLAGANPGPPSARRPFAER----GYAVVVQDVRGTGGSEGE 74 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESST--CTC-HHHHHHTTCHHSHGGGHHHHHT----T-EEEEEE-TTSTTS-S-
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcC--CCCCcccchhhhhcccchhHHHHHhC----CCEEEEECCcccccCCCc
Confidence 466766554433 3333357778889998 543 111111 1127776 999999999999999844
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 141 KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 141 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
.... ...-++|..++|+-+..+ .....+|-++|.|.+|..++.+|...|..+++++...+..
T Consensus 75 ~~~~-~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~ 136 (272)
T PF02129_consen 75 FDPM-SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWS 136 (272)
T ss_dssp B-TT-SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-S
T ss_pred cccC-ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCC
Confidence 2222 333345555554444211 1245689999999999999999998888999999887643
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=3e-09 Score=104.39 Aligned_cols=88 Identities=15% Similarity=0.067 Sum_probs=63.3
Q ss_pred HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCC--------------CCCCCCcEEEEec
Q 017180 111 VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSP--------------VSSSESDLVIFGG 176 (376)
Q Consensus 111 ~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~--------------~~~~~~~~~lvG~ 176 (376)
..+.+.++ ||.|+..|.||.|.|+.....+..+ -.+|..++|+.+..+ ......+|.++|.
T Consensus 271 ~~~~~~~r----GYaVV~~D~RGtg~SeG~~~~~~~~-E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~ 345 (767)
T PRK05371 271 LNDYFLPR----GFAVVYVSGIGTRGSDGCPTTGDYQ-EIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGK 345 (767)
T ss_pred HHHHHHhC----CeEEEEEcCCCCCCCCCcCccCCHH-HHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEE
Confidence 44667776 9999999999999999543333332 234544444444311 1123578999999
Q ss_pred chHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 177 GHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 177 S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
|+||.+++.+|...|..++++|.+++.
T Consensus 346 SY~G~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 346 SYLGTLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred cHHHHHHHHHHhhCCCcceEEEeeCCC
Confidence 999999999999989899999988763
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.9e-10 Score=94.45 Aligned_cols=103 Identities=16% Similarity=0.178 Sum_probs=62.4
Q ss_pred EEEecCCCCC-ccchHhHHHHHHHHh-hhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 93 ILMIPTISDV-STVEEWRLVAQDIVQ-RVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 93 vvllHG~~~~-~~~~~~~~~~~~L~~-~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
||++||.+-. ++......+...+++ . |+.|+.+|||=..+. .....+++..+.+..+++... ......++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~----g~~v~~~~Yrl~p~~---~~p~~~~D~~~a~~~l~~~~~-~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAER----GFVVVSIDYRLAPEA---PFPAALEDVKAAYRWLLKNAD-KLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHH----TSEEEEEE---TTTS---STTHHHHHHHHHHHHHHHTHH-HHTEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhc----cEEEEEeeccccccc---cccccccccccceeeeccccc-cccccccc
Confidence 7899997744 233334455666665 5 899999999944221 122334444445555555510 00013678
Q ss_pred EEEEecchHHHHHHHHHHhCC----CCcceEEEeccC
Q 017180 171 LVIFGGGHAATLTVRAAKKNL----VKPTAIAAVAPT 203 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~~p----~~v~~lvl~~p~ 203 (376)
++|+|+|.||.+++.++.+.. ..++++++++|.
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPW 109 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCH
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhccccc
Confidence 999999999999999988322 248999999983
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.8e-09 Score=90.86 Aligned_cols=227 Identities=10% Similarity=0.089 Sum_probs=126.5
Q ss_pred CCcEEEecCCCCCccchHhHH--HHHHHHhhhCCcceEEEEeCCCCCcCCCCCC----CCCCHHHHH----------HHH
Q 017180 90 SKNILMIPTISDVSTVEEWRL--VAQDIVQRVGKVNWRATIVDWPGLGYSDRPK----MDYNADVME----------KFV 153 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~--~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~----~~~~~~~~~----------~~l 153 (376)
+|.+|.+.|.| .+....+. ++..|.+. |+..+.+..|-||.-.+.. .-.+..++. ..|
T Consensus 92 rp~~IhLagTG--Dh~f~rR~~l~a~pLl~~----gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~L 165 (348)
T PF09752_consen 92 RPVCIHLAGTG--DHGFWRRRRLMARPLLKE----GIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRAL 165 (348)
T ss_pred CceEEEecCCC--ccchhhhhhhhhhHHHHc----CcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHH
Confidence 67888899988 65443332 25666665 9999999999998754322 111222211 112
Q ss_pred HHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCc
Q 017180 154 VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPG 233 (376)
Q Consensus 154 ~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (376)
..+++..+ ..++.+.|.||||.+|...|...|..+..+-.+++..+... +....+....
T Consensus 166 l~Wl~~~G------~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~v---------------Ft~Gvls~~i 224 (348)
T PF09752_consen 166 LHWLEREG------YGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVV---------------FTEGVLSNSI 224 (348)
T ss_pred HHHHHhcC------CCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcc---------------hhhhhhhcCC
Confidence 23334445 67999999999999999999999988777767766432100 0001111110
Q ss_pred hhhHHhhhhhccHHHHHHHHHhcccC---------CCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHH
Q 017180 234 VGWMMYNMLVSNEKAIQSQYKSHVYS---------NPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQ 304 (376)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (376)
.-..+.... . .............. .....+.+.+ .++....+. ..
T Consensus 225 ~W~~L~~q~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~-----------------~~m~~~md~-------~T 278 (348)
T PF09752_consen 225 NWDALEKQF-E-DTVYEEEISDIPAQNKSLPLDSMEERRRDREAL-----------------RFMRGVMDS-------FT 278 (348)
T ss_pred CHHHHHHHh-c-ccchhhhhcccccCcccccchhhccccchHHHH-----------------HHHHHHHHh-------hc
Confidence 000000000 0 00000000000000 0000111111 111110000 00
Q ss_pred HHhccc---CCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCCCC-CCCCChHHHHHHHHHHHH
Q 017180 305 LFADLE---GKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALL-PQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 305 ~~~~i~---~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~e~pe~~~~~i~~fl~ 369 (376)
.+.+.+ ..-.+.++.+++|.++|......+.+..|++++..+++||. .++-+.+.|.++|.+=+.
T Consensus 279 ~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 279 HLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred cccccCCCCCCCcEEEEEecCceEechhhcchHHHhCCCCeEEEecCCcEEEeeechHHHHHHHHHHhh
Confidence 111110 13467888999999999988889999999999999999998 677788899999988664
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.9e-08 Score=89.37 Aligned_cols=123 Identities=15% Similarity=0.156 Sum_probs=78.7
Q ss_pred ceeEEEEecccC-CCCCCCcEEEecCCCCCccchHhHHHH------------------HHHHhhhCCcceEEEEeCCC-C
Q 017180 74 SINIYYEKHERE-SPDPSKNILMIPTISDVSTVEEWRLVA------------------QDIVQRVGKVNWRATIVDWP-G 133 (376)
Q Consensus 74 g~~l~y~~~g~~-~~~~~~~vvllHG~~~~~~~~~~~~~~------------------~~L~~~~~~~~~~Vi~~D~~-G 133 (376)
+.+++|.-.... +++..|.||+++|.+ +++..+..+. ..+.+ ..+|+.+|.| |
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGP--G~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-----~~~~l~iDqP~G 132 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGP--GCSSMFALLAENGPCLMNETTGDIYNNTYSWNN-----EAYVIYVDQPAG 132 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCC--cHHHHHhhhccCCCeEEeCCCCceeECCccccc-----ccCeEEEeCCCC
Confidence 456666655432 223378999999998 6655442211 01122 4789999975 8
Q ss_pred CcCCCC--CCCCCCHHHHHHHHHHHHhCCCCCC-CCCCCcEEEEecchHHHHHHHHHHhC----------CCCcceEEEe
Q 017180 134 LGYSDR--PKMDYNADVMEKFVVDLINAPDSPV-SSSESDLVIFGGGHAATLTVRAAKKN----------LVKPTAIAAV 200 (376)
Q Consensus 134 ~G~S~~--~~~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~lvG~S~Gg~ia~~~a~~~----------p~~v~~lvl~ 200 (376)
+|.|-. .....+.++.++|+.++++..-... .....+++|+|||+||.++..+|.+- .-.++++++.
T Consensus 133 ~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IG 212 (462)
T PTZ00472 133 VGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVG 212 (462)
T ss_pred cCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEe
Confidence 888862 2234556778888888876431000 01258899999999999998887731 1346788887
Q ss_pred ccC
Q 017180 201 APT 203 (376)
Q Consensus 201 ~p~ 203 (376)
+|.
T Consensus 213 Ng~ 215 (462)
T PTZ00472 213 NGL 215 (462)
T ss_pred ccc
Confidence 764
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=4.3e-08 Score=86.16 Aligned_cols=109 Identities=8% Similarity=0.000 Sum_probs=77.5
Q ss_pred CCCcEEEecCCCCC---ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhC-CCCCC
Q 017180 89 PSKNILMIPTISDV---STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA-PDSPV 164 (376)
Q Consensus 89 ~~~~vvllHG~~~~---~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~-l~~~~ 164 (376)
..|.|||+||.|.. .....++.+...+++. ++.-|+.+|||=--+.. .+...++-.+.+..+.+. +. ..
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~---~~~vvvSVdYRLAPEh~---~Pa~y~D~~~Al~w~~~~~~~-~~ 161 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAE---LNCVVVSVDYRLAPEHP---FPAAYDDGWAALKWVLKNSWL-KL 161 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHH---cCeEEEecCcccCCCCC---CCccchHHHHHHHHHHHhHHH-Hh
Confidence 36889999998733 2356788888888765 37999999999544333 334556666666666654 10 00
Q ss_pred CCCCCcEEEEecchHHHHHHHHHHh------CCCCcceEEEeccCC
Q 017180 165 SSSESDLVIFGGGHAATLTVRAAKK------NLVKPTAIAAVAPTW 204 (376)
Q Consensus 165 ~~~~~~~~lvG~S~Gg~ia~~~a~~------~p~~v~~lvl~~p~~ 204 (376)
....++++|+|-|.||.||..+|.+ .+.++++.|++-|..
T Consensus 162 ~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~ 207 (336)
T KOG1515|consen 162 GADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFF 207 (336)
T ss_pred CCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEeccc
Confidence 1246779999999999999998883 246789999999965
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.6e-09 Score=89.50 Aligned_cols=111 Identities=10% Similarity=0.114 Sum_probs=70.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhh----hCCcceEEEEeCCCCCcCCCCCCC-CCCHHHHHHHHHHHHhCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQR----VGKVNWRATIVDWPGLGYSDRPKM-DYNADVMEKFVVDLINAPDSPV 164 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~----~~~~~~~Vi~~D~~G~G~S~~~~~-~~~~~~~~~~l~~~l~~l~~~~ 164 (376)
+.|||||||.+ ++...|+.+...+.+. .....++++++|+......-.... ....+...+.+..+++.....
T Consensus 4 g~pVlFIhG~~--Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~- 80 (225)
T PF07819_consen 4 GIPVLFIHGNA--GSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSN- 80 (225)
T ss_pred CCEEEEECcCC--CCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhc-
Confidence 67899999999 8888888887777321 112258899999877532211111 111222333444444444100
Q ss_pred CCCCCcEEEEecchHHHHHHHHHHhC---CCCcceEEEeccC
Q 017180 165 SSSESDLVIFGGGHAATLTVRAAKKN---LVKPTAIAAVAPT 203 (376)
Q Consensus 165 ~~~~~~~~lvG~S~Gg~ia~~~a~~~---p~~v~~lvl~~p~ 203 (376)
....+++++|||||||.+|..+.... ++.|+.+|.++.+
T Consensus 81 ~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 81 RPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred cCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 11478899999999999998887643 3578899888653
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.5e-08 Score=77.07 Aligned_cols=173 Identities=18% Similarity=0.149 Sum_probs=107.2
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
+.+|.+||+.+++ ..+|+.. +.+++ -.+-.+++. ....-..++|.+.+.+.+... .++
T Consensus 3 ~~~lIVpG~~~Sg-~~HWq~~---we~~l----~~a~rveq~-------~w~~P~~~dWi~~l~~~v~a~-------~~~ 60 (181)
T COG3545 3 TDVLIVPGYGGSG-PNHWQSR---WESAL----PNARRVEQD-------DWEAPVLDDWIARLEKEVNAA-------EGP 60 (181)
T ss_pred ceEEEecCCCCCC-hhHHHHH---HHhhC----ccchhcccC-------CCCCCCHHHHHHHHHHHHhcc-------CCC
Confidence 4589999988333 4667542 22221 111112211 113456788888888777776 567
Q ss_pred EEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHH
Q 017180 171 LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQ 250 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (376)
++||+||+|+..+++++.+....|.++.|++|.-.. ++....
T Consensus 61 ~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~--------------------------------------~~~~~~ 102 (181)
T COG3545 61 VVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVS--------------------------------------RPEIRP 102 (181)
T ss_pred eEEEEecccHHHHHHHHHhhhhccceEEEecCCCcc--------------------------------------ccccch
Confidence 999999999999999999766699999999984200 000000
Q ss_pred HHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHH
Q 017180 251 SQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAE 330 (376)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~ 330 (376)
... ..+. + . -...+ .-|.+++..++|++++.+.
T Consensus 103 -~~~-~tf~-----------------------------------~-------~-p~~~l--pfps~vvaSrnDp~~~~~~ 135 (181)
T COG3545 103 -KHL-MTFD-----------------------------------P-------I-PREPL--PFPSVVVASRNDPYVSYEH 135 (181)
T ss_pred -hhc-cccC-----------------------------------C-------C-ccccC--CCceeEEEecCCCCCCHHH
Confidence 000 0000 0 0 00112 5599999999999999999
Q ss_pred HHHHhcccCCceEEEeCCC-CCCCC---CChHHHHHHHHHHHHhh
Q 017180 331 MEALKGAKGVTKFVEVPGA-LLPQE---EYPAMVAQELYQFLQQT 371 (376)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~-H~~~~---e~pe~~~~~i~~fl~~~ 371 (376)
++.+++..+.. ++....+ |+--. ....+....+.+|+.+.
T Consensus 136 a~~~a~~wgs~-lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~~ 179 (181)
T COG3545 136 AEDLANAWGSA-LVDVGEGGHINAESGFGPWPEGYALLAQLLSRA 179 (181)
T ss_pred HHHHHHhccHh-heecccccccchhhcCCCcHHHHHHHHHHhhhh
Confidence 99999887654 4555555 88433 23344666677777654
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.1e-08 Score=86.55 Aligned_cols=111 Identities=11% Similarity=0.068 Sum_probs=71.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHH-hhhCCcceEEEEeCCCCC----cC-C---CCCC------C-C-CCHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIV-QRVGKVNWRATIVDWPGL----GY-S---DRPK------M-D-YNADVMEKF 152 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~-~~~~~~~~~Vi~~D~~G~----G~-S---~~~~------~-~-~~~~~~~~~ 152 (376)
..|.|||||++ ++...+..++..+. +.......=++-++--|+ |. + ..|- . . .+....++.
T Consensus 11 ~tPTifihG~~--gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 11 TTPTIFIHGYG--GTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp -EEEEEE--TT--GGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred CCcEEEECCCC--CChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 45799999999 99999999999997 542211222344444443 22 1 1221 1 2 356778888
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCC-----CCcceEEEeccCC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNL-----VKPTAIAAVAPTW 204 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p-----~~v~~lvl~~p~~ 204 (376)
+..++..|..++ ..+++-+|||||||..++.++..+. ..+.++|.++.++
T Consensus 89 l~~vl~~L~~~Y--~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pf 143 (255)
T PF06028_consen 89 LKKVLKYLKKKY--HFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPF 143 (255)
T ss_dssp HHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--T
T ss_pred HHHHHHHHHHhc--CCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEecccc
Confidence 888887775444 4788999999999999999988642 2579999998754
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.98 E-value=5.4e-08 Score=86.63 Aligned_cols=107 Identities=11% Similarity=0.037 Sum_probs=69.1
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|.||++||.+.. ++......+...+... .|+.|+.+|||---+-. ....+++..+.+..+.++.. ......
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~---~g~~vv~vdYrlaPe~~---~p~~~~d~~~a~~~l~~~~~-~~g~dp 151 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAA---AGAVVVSVDYRLAPEHP---FPAALEDAYAAYRWLRANAA-ELGIDP 151 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHH---cCCEEEecCCCCCCCCC---CCchHHHHHHHHHHHHhhhH-hhCCCc
Confidence 6899999997744 2333332444444432 28999999999654432 33455554444444444421 111236
Q ss_pred CcEEEEecchHHHHHHHHHHhCC----CCcceEEEeccC
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNL----VKPTAIAAVAPT 203 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p----~~v~~lvl~~p~ 203 (376)
++++|+|+|.||.+++.++..-. ......+++.|.
T Consensus 152 ~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~ 190 (312)
T COG0657 152 SRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPL 190 (312)
T ss_pred cceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 78999999999999999988433 256788999884
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.6e-08 Score=87.56 Aligned_cols=255 Identities=11% Similarity=0.084 Sum_probs=135.1
Q ss_pred CCcEEEecCCCCCccchHhH-----HHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHH-HH----HHHHHhC
Q 017180 90 SKNILMIPTISDVSTVEEWR-----LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVME-KF----VVDLINA 159 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~-----~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~-~~----l~~~l~~ 159 (376)
++|++++|-+- ..-+.|+ .++..|.+. |+.|+.+|+++=..+.. ..+.+++. +. +..+.+.
T Consensus 107 ~~PlLiVpP~i--Nk~yi~Dl~~~~s~V~~l~~~----g~~vfvIsw~nPd~~~~---~~~~edYi~e~l~~aid~v~~i 177 (445)
T COG3243 107 KRPLLIVPPWI--NKFYILDLSPEKSLVRWLLEQ----GLDVFVISWRNPDASLA---AKNLEDYILEGLSEAIDTVKDI 177 (445)
T ss_pred CCceEeecccc--CceeEEeCCCCccHHHHHHHc----CCceEEEeccCchHhhh---hccHHHHHHHHHHHHHHHHHHH
Confidence 67899999987 6555543 456666665 99999999997766653 34555555 34 4444444
Q ss_pred CCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCC-cceEEEeccCCCCCCCcc---cCCCCchhhhhHHHHhhhccCc-h
Q 017180 160 PDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVK-PTAIAAVAPTWAGPLPIV---FGRDSSMETRYGLLRGTLRAPG-V 234 (376)
Q Consensus 160 l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~ 234 (376)
.+ .+++.++|++.||.++..+++.++.+ |++++++.....-..+.. +......+....-+......+. .
T Consensus 178 tg------~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ 251 (445)
T COG3243 178 TG------QKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWY 251 (445)
T ss_pred hC------ccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHH
Confidence 44 68899999999999999999988877 999988754331111110 1111001111110000001111 1
Q ss_pred hhHHhhhhhccHHHHHHHHHhcccCC--------------CCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHH
Q 017180 235 GWMMYNMLVSNEKAIQSQYKSHVYSN--------------PDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 300 (376)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (376)
....|.++ +....+...+.+..... ....+......+.+.....+.. ..+.....+
T Consensus 252 ma~~F~mL-rpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l------~~g~~~v~G--- 321 (445)
T COG3243 252 MAIVFFLL-RPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRL------IRGGLEVSG--- 321 (445)
T ss_pred HHHHHHhc-CccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChh------hccceEECC---
Confidence 11122222 11222222222222211 1122222222222111111000 000000000
Q ss_pred HHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCC-ceEEEeCCCCCCCCCCh-H----H----HHHHHHHHHHh
Q 017180 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGV-TKFVEVPGALLPQEEYP-A----M----VAQELYQFLQQ 370 (376)
Q Consensus 301 ~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~H~~~~e~p-e----~----~~~~i~~fl~~ 370 (376)
..-.+.+| +||++++.|++|.+.|.+.........++ ++++..+.||....-+| . . .-..+.+|+.+
T Consensus 322 -~~VdL~~I--t~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~ 398 (445)
T COG3243 322 -TMVDLGDI--TCPVYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLSRSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSG 398 (445)
T ss_pred -EEechhhc--ccceEEEeecccccCCHHHHHHHHHhcCCceEEEEecCceEEEEeCCcchhhhhcCCCCcchHHHHHHh
Confidence 01124566 99999999999999999888888777666 77888877798554432 1 1 12356677765
Q ss_pred hc
Q 017180 371 TF 372 (376)
Q Consensus 371 ~~ 372 (376)
..
T Consensus 399 a~ 400 (445)
T COG3243 399 AK 400 (445)
T ss_pred hc
Confidence 53
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.96 E-value=7.6e-09 Score=81.87 Aligned_cols=99 Identities=9% Similarity=0.057 Sum_probs=74.3
Q ss_pred cEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcE
Q 017180 92 NILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDL 171 (376)
Q Consensus 92 ~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~ 171 (376)
.+||+-|=+ +....=..++..|++. |+.|+.+|-+=|=.+. .+.++.++|+..+++....+. ..+++
T Consensus 4 ~~v~~SGDg--Gw~~~d~~~a~~l~~~----G~~VvGvdsl~Yfw~~-----rtP~~~a~Dl~~~i~~y~~~w--~~~~v 70 (192)
T PF06057_consen 4 LAVFFSGDG--GWRDLDKQIAEALAKQ----GVPVVGVDSLRYFWSE-----RTPEQTAADLARIIRHYRARW--GRKRV 70 (192)
T ss_pred EEEEEeCCC--CchhhhHHHHHHHHHC----CCeEEEechHHHHhhh-----CCHHHHHHHHHHHHHHHHHHh--CCceE
Confidence 467777766 5544445778888887 9999999977665554 456788888888887664333 36789
Q ss_pred EEEecchHHHHHHHHHHhCC----CCcceEEEeccC
Q 017180 172 VIFGGGHAATLTVRAAKKNL----VKPTAIAAVAPT 203 (376)
Q Consensus 172 ~lvG~S~Gg~ia~~~a~~~p----~~v~~lvl~~p~ 203 (376)
+|+|+|+|+-+.-....+-| ++|..++|++|.
T Consensus 71 vLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 71 VLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred EEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 99999999988777666544 478899999884
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.3e-09 Score=82.40 Aligned_cols=192 Identities=13% Similarity=0.081 Sum_probs=110.7
Q ss_pred EEEecccCCCCCCCcEEEecCCC-CCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHHHHHHH
Q 017180 78 YYEKHERESPDPSKNILMIPTIS-DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKFVVD 155 (376)
Q Consensus 78 ~y~~~g~~~~~~~~~vvllHG~~-~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~~l~~ 155 (376)
....+|+.+. .+..|||||.- ..++...-..++..+.++ ||+|..++ ||.+... ...-++.+...-+.-
T Consensus 57 ~VDIwg~~~~--~klfIfIHGGYW~~g~rk~clsiv~~a~~~----gY~vasvg---Y~l~~q~htL~qt~~~~~~gv~f 127 (270)
T KOG4627|consen 57 LVDIWGSTNQ--AKLFIFIHGGYWQEGDRKMCLSIVGPAVRR----GYRVASVG---YNLCPQVHTLEQTMTQFTHGVNF 127 (270)
T ss_pred EEEEecCCCC--ccEEEEEecchhhcCchhcccchhhhhhhc----CeEEEEec---cCcCcccccHHHHHHHHHHHHHH
Confidence 4566775544 67889999832 112222222334444444 99999985 4555432 223344455555555
Q ss_pred HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH-hCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCch
Q 017180 156 LINAPDSPVSSSESDLVIFGGGHAATLTVRAAK-KNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGV 234 (376)
Q Consensus 156 ~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~-~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (376)
+++... ..+.+.+-|||.|+.+|+.+.. .+-.+|.++++.++..
T Consensus 128 ilk~~~-----n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY------------------------------ 172 (270)
T KOG4627|consen 128 ILKYTE-----NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVY------------------------------ 172 (270)
T ss_pred HHHhcc-----cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHh------------------------------
Confidence 566654 3455777799999999998766 4455788888776521
Q ss_pred hhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCc
Q 017180 235 GWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLP 314 (376)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~P 314 (376)
. ++. +....+.+.-..+.+..+.. .+ ....+..+ +.|
T Consensus 173 -----~--------l~E-L~~te~g~dlgLt~~~ae~~---------------------Sc------dl~~~~~v--~~~ 209 (270)
T KOG4627|consen 173 -----D--------LRE-LSNTESGNDLGLTERNAESV---------------------SC------DLWEYTDV--TVW 209 (270)
T ss_pred -----h--------HHH-HhCCccccccCcccchhhhc---------------------Cc------cHHHhcCc--eee
Confidence 0 000 00000100001111110000 00 12235566 899
Q ss_pred EEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCC
Q 017180 315 LLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEY 356 (376)
Q Consensus 315 vlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~ 356 (376)
+|++.|++|..--.+.-+.+......+++..+++. |+-.+|+
T Consensus 210 ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 210 ILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred eeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHHH
Confidence 99999999976666777777777777899999997 9955544
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=98.95 E-value=5.7e-08 Score=80.40 Aligned_cols=109 Identities=9% Similarity=0.049 Sum_probs=69.8
Q ss_pred CCcEEEecCCCCCccchHhHHH--HHHHHhhhCCcceEEEEeCCCCCcCCC---C--CCCCCCHHHHHHHHHHHHhCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLV--AQDIVQRVGKVNWRATIVDWPGLGYSD---R--PKMDYNADVMEKFVVDLINAPDS 162 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~--~~~L~~~~~~~~~~Vi~~D~~G~G~S~---~--~~~~~~~~~~~~~l~~~l~~l~~ 162 (376)
.|.||++||.+ .+...+... +..|+++ .||-|+.|+........ . ......-..-...|.++++++..
T Consensus 16 ~PLVv~LHG~~--~~a~~~~~~s~~~~lAd~---~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~ 90 (220)
T PF10503_consen 16 VPLVVVLHGCG--QSAEDFAAGSGWNALADR---EGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAA 90 (220)
T ss_pred CCEEEEeCCCC--CCHHHHHhhcCHHHHhhc---CCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhh
Confidence 57788889999 877766442 3456653 37999999854211100 0 00000001112334444444433
Q ss_pred CCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 163 PVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 163 ~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
++.+...+|++.|+|.||+++..++..+|+.+.++..+++.
T Consensus 91 ~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 91 RYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred hcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccc
Confidence 33456789999999999999999999999999999888763
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.2e-08 Score=85.43 Aligned_cols=105 Identities=12% Similarity=0.118 Sum_probs=77.6
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCC----CC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSP----VS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~----~~ 165 (376)
=|.|||+||+. .....|..++.++++. ||-|+++|+...+.. ......+..++.+..+.+.+... ..
T Consensus 17 yPVv~f~~G~~--~~~s~Ys~ll~hvASh----GyIVV~~d~~~~~~~---~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~ 87 (259)
T PF12740_consen 17 YPVVLFLHGFL--LINSWYSQLLEHVASH----GYIVVAPDLYSIGGP---DDTDEVASAAEVIDWLAKGLESKLPLGVK 87 (259)
T ss_pred cCEEEEeCCcC--CCHHHHHHHHHHHHhC----ceEEEEecccccCCC---CcchhHHHHHHHHHHHHhcchhhcccccc
Confidence 46788889999 7777799999999998 999999997765432 22233444444455444433311 11
Q ss_pred CCCCcEEEEecchHHHHHHHHHHhC-----CCCcceEEEeccC
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKKN-----LVKPTAIAAVAPT 203 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~p~ 203 (376)
....++.|+|||-||-+|..++..+ ..+++++++++|.
T Consensus 88 ~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 88 PDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred ccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 2456899999999999999999976 5689999999994
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.93 E-value=7.8e-09 Score=87.23 Aligned_cols=99 Identities=13% Similarity=0.119 Sum_probs=85.4
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
|||.++|+.+ +....|..+...|.. ...|+.++.||+|.-. ....+++++++...+.|.... +..+
T Consensus 1 ~pLF~fhp~~--G~~~~~~~L~~~l~~-----~~~v~~l~a~g~~~~~--~~~~~l~~~a~~yv~~Ir~~Q-----P~GP 66 (257)
T COG3319 1 PPLFCFHPAG--GSVLAYAPLAAALGP-----LLPVYGLQAPGYGAGE--QPFASLDDMAAAYVAAIRRVQ-----PEGP 66 (257)
T ss_pred CCEEEEcCCC--CcHHHHHHHHHHhcc-----CceeeccccCcccccc--cccCCHHHHHHHHHHHHHHhC-----CCCC
Confidence 4799999999 999999999999998 6999999999998633 245789999999998888887 5789
Q ss_pred EEEEecchHHHHHHHHHHh---CCCCcceEEEeccC
Q 017180 171 LVIFGGGHAATLTVRAAKK---NLVKPTAIAAVAPT 203 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~---~p~~v~~lvl~~p~ 203 (376)
++|+|+|+||.+|..+|.+ .-+.|..|+++++.
T Consensus 67 y~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~ 102 (257)
T COG3319 67 YVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAV 102 (257)
T ss_pred EEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccC
Confidence 9999999999999999983 34578999999874
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.2e-07 Score=74.08 Aligned_cols=250 Identities=10% Similarity=0.046 Sum_probs=145.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC---------CCCCCCCHHHHHHHHHHHHhCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD---------RPKMDYNADVMEKFVVDLINAP 160 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~---------~~~~~~~~~~~~~~l~~~l~~l 160 (376)
++-|++|.|++ +....|.+++..|-..+++ .++|+.+-.-||-.-. .....++.++.++-=.+|+++.
T Consensus 29 ~~li~~IpGNP--G~~gFY~~F~~~L~~~l~~-r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 29 KPLIVWIPGNP--GLLGFYTEFARHLHLNLID-RLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred ceEEEEecCCC--CchhHHHHHHHHHHHhccc-ccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHh
Confidence 67788899999 9999999999988875331 2668888888875432 1124678888888777888776
Q ss_pred CCCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccCCCC----CCCcccCCCCchhhhhHHHHhhhccCch
Q 017180 161 DSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPTWAG----PLPIVFGRDSSMETRYGLLRGTLRAPGV 234 (376)
Q Consensus 161 ~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (376)
- ..+.+++++|||.|+.+.+..... ---.|.+.+++-|+... +.-..... ...++.... +.
T Consensus 106 ~----Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~------~l~~~~hv~---~l 172 (301)
T KOG3975|consen 106 V----PKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTK------VLRYLPHVV---SL 172 (301)
T ss_pred C----CCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeee------eeeeehhhh---he
Confidence 4 237889999999999999998773 22357888888775311 00000000 000000000 00
Q ss_pred hhH-HhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHH----HHHHHhcc
Q 017180 235 GWM-MYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREE----FLQLFADL 309 (376)
Q Consensus 235 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i 309 (376)
... .+.. -+.+++..+.+.... .....++............ ..+..+ .+.+ ...++ ..+..++-
T Consensus 173 t~yi~~~~---lp~~ir~~Li~~~l~-~~n~p~e~l~tal~l~h~~----v~rn~v-~la~--qEm~eV~~~d~e~~een 241 (301)
T KOG3975|consen 173 TSYIYWIL---LPGFIRFILIKFMLC-GSNGPQEFLSTALFLTHPQ----VVRNSV-GLAA--QEMEEVTTRDIEYCEEN 241 (301)
T ss_pred eeeeeeec---ChHHHHHHHHHHhcc-cCCCcHHHHhhHHHhhcHH----HHHHHh-hhch--HHHHHHHHhHHHHHHhc
Confidence 000 1111 145555433332222 2234444443222211110 000000 0000 00000 12233333
Q ss_pred cCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEe-CCC-CCCCCCChHHHHHHHHHHH
Q 017180 310 EGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEV-PGA-LLPQEEYPAMVAQELYQFL 368 (376)
Q Consensus 310 ~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~-~~~-H~~~~e~pe~~~~~i~~fl 368 (376)
.+-+.+..|..|.+||.+....+++..|..++..- ++. |.....+.+..+..+.+.+
T Consensus 242 --~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 242 --LDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDEDKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred --CcEEEEEccCCCCCcchHHHHHHhhhcchhceeeccccCCcceeecccHHHHHHHHHhh
Confidence 56789999999999999999999998886655544 456 9998888888888888765
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.8e-08 Score=84.13 Aligned_cols=165 Identities=16% Similarity=0.146 Sum_probs=89.9
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC-----cCCC------------CCC-----------
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-----GYSD------------RPK----------- 141 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~-----G~S~------------~~~----------- 141 (376)
++.||+|||++ ++...++.....|.+.+.+.++..+.+|-|-- |-.. .+.
T Consensus 4 k~riLcLHG~~--~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 4 KPRILCLHGYG--QNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp --EEEEE--TT----HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CceEEEeCCCC--cCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 66799999999 99999988887777754422588888775522 1110 110
Q ss_pred CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh--------CCCCcceEEEeccCCCCCCCcccC
Q 017180 142 MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK--------NLVKPTAIAAVAPTWAGPLPIVFG 213 (376)
Q Consensus 142 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--------~p~~v~~lvl~~p~~~~~~~~~~~ 213 (376)
....+++..+.|.+++++.+ .=.-|+|+|.||.+|..++.. ....++-+|++++...
T Consensus 82 ~~~~~~~sl~~l~~~i~~~G-------PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p-------- 146 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENG-------PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPP-------- 146 (212)
T ss_dssp GG---HHHHHHHHHHHHHH----------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES------------
T ss_pred cccCHHHHHHHHHHHHHhcC-------CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCC--------
Confidence 02234555556666666654 135689999999999988862 1234677888876310
Q ss_pred CCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccC
Q 017180 214 RDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLL 293 (376)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (376)
. . .. .. ..
T Consensus 147 --------------------------~---~-~~-----~~-~~------------------------------------ 154 (212)
T PF03959_consen 147 --------------------------P---D-PD-----YQ-EL------------------------------------ 154 (212)
T ss_dssp --------------------------E---E-E------GT-TT------------------------------------
T ss_pred --------------------------C---c-hh-----hh-hh------------------------------------
Confidence 0 0 00 00 00
Q ss_pred CCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCC-ceEEEeCCCCCCCCC
Q 017180 294 DPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGV-TKFVEVPGALLPQEE 355 (376)
Q Consensus 294 ~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~H~~~~e 355 (376)
+ .-..| ++|+|-|+|++|.+++.+..+.+.+...+ .+++..++||.+...
T Consensus 155 --------~--~~~~i--~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~gGH~vP~~ 205 (212)
T PF03959_consen 155 --------Y--DEPKI--SIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHDGGHHVPRK 205 (212)
T ss_dssp --------T----TT-----EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEESSSSS----
T ss_pred --------h--ccccC--CCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEECCCCcCcCC
Confidence 0 11234 78999999999999999988988877766 889999999775544
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.84 E-value=9.3e-09 Score=94.03 Aligned_cols=94 Identities=14% Similarity=0.143 Sum_probs=70.4
Q ss_pred ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC--CCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHH
Q 017180 103 STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM--DYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAA 180 (376)
Q Consensus 103 ~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~--~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg 180 (376)
.....|..+++.|.+. ||.+ ..|++|+|.+.+... ....+.+.+.++++.++.+ .++++|+||||||
T Consensus 105 ~~~~~~~~li~~L~~~----GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g------~~kV~LVGHSMGG 173 (440)
T PLN02733 105 DEVYYFHDMIEQLIKW----GYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASG------GKKVNIISHSMGG 173 (440)
T ss_pred chHHHHHHHHHHHHHc----CCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcC------CCCEEEEEECHhH
Confidence 5568999999999996 7755 899999999875432 1223444444445555554 6799999999999
Q ss_pred HHHHHHHHhCCCC----cceEEEeccCCCCC
Q 017180 181 TLTVRAAKKNLVK----PTAIAAVAPTWAGP 207 (376)
Q Consensus 181 ~ia~~~a~~~p~~----v~~lvl~~p~~~~~ 207 (376)
.+++.++..+|+. |+++|.+++++.+.
T Consensus 174 lva~~fl~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 174 LLVKCFMSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHHHHHHHHCCHhHHhHhccEEEECCCCCCC
Confidence 9999999887764 78899998866443
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.6e-07 Score=71.69 Aligned_cols=54 Identities=9% Similarity=-0.110 Sum_probs=37.7
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcccCCc-eEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAKGVT-KFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
.-..+++..+.|.+.+.+.+.... .++ ++++.+|| |-. +.=+.....|.+|+++
T Consensus 124 p~r~~vllq~gDEvLDyr~a~~~y---~~~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 124 RDRCLVILSRNDEVLDSQRTAEEL---HPYYEIVWDEEQTHKF--KNISPHLQRIKAFKTL 179 (180)
T ss_pred cccEEEEEeCCCcccCHHHHHHHh---ccCceEEEECCCCCCC--CCHHHHHHHHHHHHhc
Confidence 345699999999999876555433 233 57888999 862 3344578888899853
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.80 E-value=4e-07 Score=73.25 Aligned_cols=58 Identities=17% Similarity=0.194 Sum_probs=49.2
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhh
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
++|.|-|.|+.|.+++.+..+.+.+.+++..+...++||++.-.. .+.+.|.+||+..
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~HpggH~VP~~~--~~~~~i~~fi~~~ 220 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFKDATVLEHPGGHIVPNKA--KYKEKIADFIQSF 220 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcCCCeEEecCCCccCCCch--HHHHHHHHHHHHH
Confidence 899999999999999999999999999999888888889976555 4666677777654
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.80 E-value=7.6e-07 Score=80.10 Aligned_cols=103 Identities=16% Similarity=0.199 Sum_probs=77.2
Q ss_pred CCcEEEecCCCCCccchHhH------HHHHHHHhhhCCcceEEEEeCCCCCcCCCC-----C-----CCCCCHHHHHH-H
Q 017180 90 SKNILMIPTISDVSTVEEWR------LVAQDIVQRVGKVNWRATIVDWPGLGYSDR-----P-----KMDYNADVMEK-F 152 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~------~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~-----~-----~~~~~~~~~~~-~ 152 (376)
+|+|+|.||+. .++..|- .+.-.|+++ ||.|..-..||--.|.+ + -.+++..+++. |
T Consensus 73 rp~Vll~HGLl--~sS~~Wv~n~p~~sLaf~Lada----GYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yD 146 (403)
T KOG2624|consen 73 RPVVLLQHGLL--ASSSSWVLNGPEQSLAFLLADA----GYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYD 146 (403)
T ss_pred CCcEEEeeccc--cccccceecCccccHHHHHHHc----CCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcC
Confidence 78899999999 8888874 345667776 99999999999766642 1 13455555443 4
Q ss_pred HHH----HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCC---CcceEEEeccCC
Q 017180 153 VVD----LINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV---KPTAIAAVAPTW 204 (376)
Q Consensus 153 l~~----~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~p~~ 204 (376)
|-+ +++.-+ .++++.||||.|+..........|+ +|+..++++|..
T Consensus 147 LPA~IdyIL~~T~------~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 147 LPAMIDYILEKTG------QEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HHHHHHHHHHhcc------ccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 444 444443 6889999999999999988887665 799999999964
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.80 E-value=2e-07 Score=77.69 Aligned_cols=88 Identities=16% Similarity=0.242 Sum_probs=67.7
Q ss_pred ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHH
Q 017180 103 STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATL 182 (376)
Q Consensus 103 ~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~i 182 (376)
++...|..+...|.. +++|+++|++|+|.+... ..+.+.+++.+.+.+.... ...+++++|||+||.+
T Consensus 10 ~~~~~~~~~~~~l~~-----~~~v~~~~~~g~~~~~~~--~~~~~~~~~~~~~~l~~~~-----~~~~~~l~g~s~Gg~~ 77 (212)
T smart00824 10 SGPHEYARLAAALRG-----RRDVSALPLPGFGPGEPL--PASADALVEAQAEAVLRAA-----GGRPFVLVGHSSGGLL 77 (212)
T ss_pred CcHHHHHHHHHhcCC-----CccEEEecCCCCCCCCCC--CCCHHHHHHHHHHHHHHhc-----CCCCeEEEEECHHHHH
Confidence 566789999999987 799999999999876643 2456676666555544332 2578999999999999
Q ss_pred HHHHHHh---CCCCcceEEEecc
Q 017180 183 TVRAAKK---NLVKPTAIAAVAP 202 (376)
Q Consensus 183 a~~~a~~---~p~~v~~lvl~~p 202 (376)
+...+.+ .++.+.+++++++
T Consensus 78 a~~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 78 AHAVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred HHHHHHHHHhCCCCCcEEEEEcc
Confidence 9988884 4567889988875
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.78 E-value=5.1e-08 Score=78.29 Aligned_cols=176 Identities=14% Similarity=0.141 Sum_probs=112.0
Q ss_pred CCcEEEecCCCCCccch-HhHHHHHHHHhhhCCcceEEEEeCC-CCCcCCCC-CC-------CCCCHHHHHHHHHHHHhC
Q 017180 90 SKNILMIPTISDVSTVE-EWRLVAQDIVQRVGKVNWRATIVDW-PGLGYSDR-PK-------MDYNADVMEKFVVDLINA 159 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~-~~~~~~~~L~~~~~~~~~~Vi~~D~-~G~G~S~~-~~-------~~~~~~~~~~~l~~~l~~ 159 (376)
+..||+|--+. +... .-+..++.++.. ||.|++||+ +|=-.|.. +. ...+.+..-.++..+++.
T Consensus 39 ~~~li~i~Dvf--G~~~~n~r~~Adk~A~~----Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~ 112 (242)
T KOG3043|consen 39 KKVLIVIQDVF--GFQFPNTREGADKVALN----GYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKW 112 (242)
T ss_pred CeEEEEEEeee--ccccHHHHHHHHHHhcC----CcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHH
Confidence 34566665544 3333 356677788876 999999995 44112221 11 234444445555555555
Q ss_pred CCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHh
Q 017180 160 PDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMY 239 (376)
Q Consensus 160 l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (376)
+... ....++-++|..|||.++..+....| ++.+.+..-|+.
T Consensus 113 lk~~--g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~----------------------------------- 154 (242)
T KOG3043|consen 113 LKNH--GDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSF----------------------------------- 154 (242)
T ss_pred HHHc--CCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCc-----------------------------------
Confidence 4311 13678999999999999988887766 667777665521
Q ss_pred hhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEE
Q 017180 240 NMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVS 319 (376)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~ 319 (376)
. + .+..+++ ++|+|++.
T Consensus 155 --~-------------------------------------------------------d----~~D~~~v--k~Pilfl~ 171 (242)
T KOG3043|consen 155 --V-------------------------------------------------------D----SADIANV--KAPILFLF 171 (242)
T ss_pred --C-------------------------------------------------------C----hhHHhcC--CCCEEEEe
Confidence 0 0 0123344 89999999
Q ss_pred eCCCCCCCHHHHHHHhcc---cC--CceEEEeCCC-CCCC-----CCCh------HHHHHHHHHHHHhhc
Q 017180 320 TEGSPRRSKAEMEALKGA---KG--VTKFVEVPGA-LLPQ-----EEYP------AMVAQELYQFLQQTF 372 (376)
Q Consensus 320 G~~D~~~~~~~~~~~~~~---~~--~~~~~~~~~~-H~~~-----~e~p------e~~~~~i~~fl~~~~ 372 (376)
|+.|..+|++....+.+. .+ ..++.++++. |..+ .+.| |+..+.+..|+.+.+
T Consensus 172 ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 172 AELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred ecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 999999998877766543 23 2468999998 8754 3444 455667778887654
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.2e-08 Score=82.30 Aligned_cols=105 Identities=13% Similarity=0.101 Sum_probs=73.5
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHH---HhCC-CCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDL---INAP-DSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~---l~~l-~~~~~ 165 (376)
=|.|+|+||+. -....|..++.+++.. ||-|+++++-.- . .+.....++..++.+.++ ++++ -....
T Consensus 46 yPVilF~HG~~--l~ns~Ys~lL~HIASH----GfIVVAPQl~~~--~-~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~ 116 (307)
T PF07224_consen 46 YPVILFLHGFN--LYNSFYSQLLAHIASH----GFIVVAPQLYTL--F-PPDGQDEIKSAASVINWLPEGLQHVLPENVE 116 (307)
T ss_pred ccEEEEeechh--hhhHHHHHHHHHHhhc----CeEEEechhhcc--c-CCCchHHHHHHHHHHHHHHhhhhhhCCCCcc
Confidence 46788889999 8889999999999998 999999998643 1 122222223322222222 2222 12233
Q ss_pred CCCCcEEEEecchHHHHHHHHHHhCC--CCcceEEEeccC
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKKNL--VKPTAIAAVAPT 203 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~~p--~~v~~lvl~~p~ 203 (376)
....++.++|||.||-.|..+|..+. -.+++||.++|.
T Consensus 117 ~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 117 ANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPV 156 (307)
T ss_pred cccceEEEeecCCccHHHHHHHhcccccCchhheeccccc
Confidence 35678999999999999999999653 347889999884
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.2e-07 Score=79.97 Aligned_cols=109 Identities=10% Similarity=0.108 Sum_probs=68.1
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+..+||+||+. .+...-..-+..+...++. .-.++.+.||..|.-. -.....+...-...+.++++.+.... ..
T Consensus 18 ~~vlvfVHGyn--~~f~~a~~r~aql~~~~~~-~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~--~~ 92 (233)
T PF05990_consen 18 KEVLVFVHGYN--NSFEDALRRAAQLAHDLGF-PGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAP--GI 92 (233)
T ss_pred CeEEEEEeCCC--CCHHHHHHHHHHHHHHhCC-CceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhcc--CC
Confidence 56899999999 6654432323333332211 2389999999888532 11112233334445556665554211 26
Q ss_pred CcEEEEecchHHHHHHHHHHh----CC-----CCcceEEEeccC
Q 017180 169 SDLVIFGGGHAATLTVRAAKK----NL-----VKPTAIAAVAPT 203 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~----~p-----~~v~~lvl~~p~ 203 (376)
++++|++||||+.+.+..... .+ .++..+|+++|.
T Consensus 93 ~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 93 KRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred ceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 889999999999999987552 22 367889999884
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.6e-07 Score=82.38 Aligned_cols=102 Identities=12% Similarity=0.145 Sum_probs=59.8
Q ss_pred CCcEEEecCCCCCccchH--------------h----HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-----CCCCH
Q 017180 90 SKNILMIPTISDVSTVEE--------------W----RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-----MDYNA 146 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~--------------~----~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-----~~~~~ 146 (376)
-|.||++||-+ ...+. + ......|+++ ||-|+++|.+|+|+..... ..++.
T Consensus 115 ~PAVL~lHgHg--~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~----GYVvla~D~~g~GER~~~e~~~~~~~~~~ 188 (390)
T PF12715_consen 115 FPAVLCLHGHG--GGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKR----GYVVLAPDALGFGERGDMEGAAQGSNYDC 188 (390)
T ss_dssp EEEEEEE--TT----HHHHCT---SSGCG--STTSTTT-HHHHHHTT----TSEEEEE--TTSGGG-SSCCCTTTTS--H
T ss_pred CCEEEEeCCCC--CCcccccCCcccccccchhhccccccHHHHHHhC----CCEEEEEccccccccccccccccccchhH
Confidence 67899999876 43322 1 1346788887 9999999999999876332 11222
Q ss_pred HHHHHHH------------------HHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEec
Q 017180 147 DVMEKFV------------------VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVA 201 (376)
Q Consensus 147 ~~~~~~l------------------~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~ 201 (376)
+.++..+ .++++.+. .+..++|.++|+||||..++.+|+.- ++|+..|..+
T Consensus 189 ~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slp---eVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~ 257 (390)
T PF12715_consen 189 QALARNLLMLGRSLAGLMAWDDMRALDFLASLP---EVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANG 257 (390)
T ss_dssp HHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-T---TEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES
T ss_pred HHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCc---ccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhh
Confidence 2222211 23444432 44567899999999999999999864 3787777654
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.66 E-value=5.6e-09 Score=92.34 Aligned_cols=114 Identities=14% Similarity=0.240 Sum_probs=62.3
Q ss_pred CCcEEEecCCCCCccchHh-HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEW-RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~-~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+|++|++|||........| ..+...+.+.. ..+++||++|+...-...-...........+.|..+|..|........
T Consensus 71 ~pt~iiiHGw~~~~~~~~~~~~~~~all~~~-~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~ 149 (331)
T PF00151_consen 71 KPTVIIIHGWTGSGSSESWIQDMIKALLQKD-TGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPP 149 (331)
T ss_dssp SEEEEEE--TT-TT-TTTHHHHHHHHHHCC---S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---G
T ss_pred CCeEEEEcCcCCcccchhHHHHHHHHHHhhc-cCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCCh
Confidence 7899999999943312344 44445443310 017999999996432211000111122333444444444321111246
Q ss_pred CcEEEEecchHHHHHHHHHHhCCC--CcceEEEeccCC
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLV--KPTAIAAVAPTW 204 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~p~~ 204 (376)
++++|||||+|+.+|-.++..... +|.+++.++|+.
T Consensus 150 ~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 150 ENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp GGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred hHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 889999999999999999997666 899999999964
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.5e-07 Score=76.24 Aligned_cols=50 Identities=18% Similarity=0.263 Sum_probs=36.5
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
+...+++.... .+..+++.|+|.|.||-+|+.+|..+| .|+++|.++|..
T Consensus 7 e~Ai~~L~~~p---~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 7 EEAIDWLKSHP---EVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHCST---TB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--S
T ss_pred HHHHHHHHhCC---CCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCce
Confidence 34444444442 123578999999999999999999999 899999999853
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.63 E-value=9.8e-07 Score=86.72 Aligned_cols=221 Identities=15% Similarity=0.097 Sum_probs=130.7
Q ss_pred CceeEEEEecccCCC--CCC-CcEEEecCCCCC-----ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC----
Q 017180 73 NSINIYYEKHERESP--DPS-KNILMIPTISDV-----STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP---- 140 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~--~~~-~~vvllHG~~~~-----~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~---- 140 (376)
+|+..++...-+++- ..+ |.||.+||.+.+ ...-.|..+ ..... |+-|+.+|.||-|.....
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~----g~~v~~vd~RGs~~~G~~~~~~ 579 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSR----GFAVLQVDGRGSGGYGWDFRSA 579 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccC----CeEEEEEcCCCcCCcchhHHHH
Confidence 577777766544321 113 455666998831 223345333 34444 899999999999876421
Q ss_pred --C--CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceE-EEeccCCCCCCCcccCCC
Q 017180 141 --K--MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAI-AAVAPTWAGPLPIVFGRD 215 (376)
Q Consensus 141 --~--~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~l-vl~~p~~~~~~~~~~~~~ 215 (376)
. .....++....+..+++..- ...+++.++|+|.||.+++..+...|+.+-+. +.++|..
T Consensus 580 ~~~~lG~~ev~D~~~~~~~~~~~~~----iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVt----------- 644 (755)
T KOG2100|consen 580 LPRNLGDVEVKDQIEAVKKVLKLPF----IDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVT----------- 644 (755)
T ss_pred hhhhcCCcchHHHHHHHHHHHhccc----ccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEeccee-----------
Confidence 1 24566666666666766652 34678999999999999999999988555544 8888842
Q ss_pred CchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCC
Q 017180 216 SSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDP 295 (376)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (376)
... ++... -..+.+ . ...+....|.+..
T Consensus 645 --------------d~~-----~yds~-~terym----g---------~p~~~~~~y~e~~------------------- 672 (755)
T KOG2100|consen 645 --------------DWL-----YYDST-YTERYM----G---------LPSENDKGYEESS------------------- 672 (755)
T ss_pred --------------eee-----eeccc-ccHhhc----C---------CCccccchhhhcc-------------------
Confidence 100 00000 000000 0 0000000000000
Q ss_pred CCcHHHHHHHHhcccCCCc-EEEEEeCCCCCCCHHHHHHHh----cccCCceEEEeCCC-CCCCCCCh-HHHHHHHHHHH
Q 017180 296 VNSREEFLQLFADLEGKLP-LLVVSTEGSPRRSKAEMEALK----GAKGVTKFVEVPGA-LLPQEEYP-AMVAQELYQFL 368 (376)
Q Consensus 296 ~~~~~~~~~~~~~i~~~~P-vlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~~~~~-H~~~~e~p-e~~~~~i~~fl 368 (376)
....+..+ +.| .|++||+.|..+..+....+. ...-..+..++|+. |....-.. ..+...+..|+
T Consensus 673 ------~~~~~~~~--~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~ 744 (755)
T KOG2100|consen 673 ------VSSPANNI--KTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFL 744 (755)
T ss_pred ------ccchhhhh--ccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHH
Confidence 11223334 444 499999999998766555443 33223889999999 99766543 56788899999
Q ss_pred HhhcCC
Q 017180 369 QQTFEP 374 (376)
Q Consensus 369 ~~~~~~ 374 (376)
...+..
T Consensus 745 ~~~~~~ 750 (755)
T KOG2100|consen 745 RDCFGS 750 (755)
T ss_pred HHHcCc
Confidence 977654
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.5e-08 Score=83.60 Aligned_cols=86 Identities=10% Similarity=0.167 Sum_probs=52.3
Q ss_pred CcEEEecCCCCCc-cchHhHHHHHHHHhhhCCcceE---EEEeCCCCCcCCCCCCC-C---CCHHHHHHHHHHHHhCCCC
Q 017180 91 KNILMIPTISDVS-TVEEWRLVAQDIVQRVGKVNWR---ATIVDWPGLGYSDRPKM-D---YNADVMEKFVVDLINAPDS 162 (376)
Q Consensus 91 ~~vvllHG~~~~~-~~~~~~~~~~~L~~~~~~~~~~---Vi~~D~~G~G~S~~~~~-~---~~~~~~~~~l~~~l~~l~~ 162 (376)
.||||+||.+ + ....|..+.+.|.++ ||. |+++++-....+..... . .+..++++.+..+++.-+
T Consensus 2 ~PVVlVHG~~--~~~~~~w~~~~~~l~~~----GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TG- 74 (219)
T PF01674_consen 2 RPVVLVHGTG--GNAYSNWSTLAPYLKAA----GYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTG- 74 (219)
T ss_dssp --EEEE--TT--TTTCGGCCHHHHHHHHT----T--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT-
T ss_pred CCEEEECCCC--cchhhCHHHHHHHHHHc----CCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhC-
Confidence 3699999999 7 668899999999997 999 89999965544331111 1 111233444444444544
Q ss_pred CCCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 163 PVSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 163 ~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
. +|-||||||||.++..+..-
T Consensus 75 -----a-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 75 -----A-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp --------EEEEEETCHHHHHHHHHHH
T ss_pred -----C-EEEEEEcCCcCHHHHHHHHH
Confidence 4 89999999999999988774
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.8e-07 Score=78.59 Aligned_cols=100 Identities=16% Similarity=0.108 Sum_probs=68.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHH-HhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDL-INAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~-l~~l~~~~~~~~ 168 (376)
+..|+++-|..+.-... ++..-.+. ||.|+.+.+|||+.|...+........++.+.++ |+.++ ...
T Consensus 243 q~LvIC~EGNAGFYEvG----~m~tP~~l----gYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lg----f~~ 310 (517)
T KOG1553|consen 243 QDLVICFEGNAGFYEVG----VMNTPAQL----GYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLG----FRQ 310 (517)
T ss_pred ceEEEEecCCccceEee----eecChHHh----CceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcC----CCc
Confidence 34567778876221111 22222333 8999999999999998544333333334444444 66676 246
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
+.+++.|+|.||.-++.+|..+|+ |+++||-+.
T Consensus 311 edIilygWSIGGF~~~waAs~YPd-VkavvLDAt 343 (517)
T KOG1553|consen 311 EDIILYGWSIGGFPVAWAASNYPD-VKAVVLDAT 343 (517)
T ss_pred cceEEEEeecCCchHHHHhhcCCC-ceEEEeecc
Confidence 789999999999999999999996 788888765
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.5e-06 Score=72.97 Aligned_cols=59 Identities=22% Similarity=0.343 Sum_probs=42.4
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHh----ccc-CCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALK----GAK-GVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~----~~~-~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
+.|++|.+|..|.++|....+.+. +.. .+++++.++++ |....-. -......||.+.++
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~---~~~~a~~Wl~~rf~ 283 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFA---SAPDALAWLDDRFA 283 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhc---CcHHHHHHHHHHHC
Confidence 789999999999999987776663 445 57888999988 9853211 11335578877654
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.1e-06 Score=75.64 Aligned_cols=110 Identities=15% Similarity=0.216 Sum_probs=73.6
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHh------HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEW------RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNA 146 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~------~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~ 146 (376)
|++.|--..-..+..+++..||+.-|.+ ..-+.. +..+..+++. .+.+|+.+.+||.|.|..+. +.
T Consensus 120 D~~~IDt~~I~~~~a~~~RWiL~s~GNg--~~~E~~~~~~~~~~~~~~~ak~---~~aNvl~fNYpGVg~S~G~~---s~ 191 (365)
T PF05677_consen 120 DGVKIDTMAIHQPEAKPQRWILVSNGNG--ECYENRAMLDYKDDWIQRFAKE---LGANVLVFNYPGVGSSTGPP---SR 191 (365)
T ss_pred CCEEEEEEEeeCCCCCCCcEEEEEcCCh--HHhhhhhhhccccHHHHHHHHH---cCCcEEEECCCccccCCCCC---CH
Confidence 4666544443333334478999999988 554441 1224444443 27999999999999998553 45
Q ss_pred HHHHHHHHHHHhCCCC-CCCCCCCcEEEEecchHHHHHHHHHHhC
Q 017180 147 DVMEKFVVDLINAPDS-PVSSSESDLVIFGGGHAATLTVRAAKKN 190 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~-~~~~~~~~~~lvG~S~Gg~ia~~~a~~~ 190 (376)
++++.+-.+.++.+.. ......+.+++.|||+||.++..+..++
T Consensus 192 ~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 192 KDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 7888887777766642 1112347799999999999999866654
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.50 E-value=5e-06 Score=68.24 Aligned_cols=109 Identities=10% Similarity=0.023 Sum_probs=75.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhh--CCcceEEEEeCCCCC----cCCC----CCC-------CCCCHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRV--GKVNWRATIVDWPGL----GYSD----RPK-------MDYNADVMEKF 152 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~--~~~~~~Vi~~D~~G~----G~S~----~~~-------~~~~~~~~~~~ 152 (376)
.-|.|||||.+ ++.......+..|.... ++ .-=++.+|--|- |.=+ .|. ...+..++...
T Consensus 45 ~iPTIfIhGsg--G~asS~~~Mv~ql~~~~~~~~-e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~w 121 (288)
T COG4814 45 AIPTIFIHGSG--GTASSLNGMVNQLLPDYKAGT-ESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKW 121 (288)
T ss_pred ccceEEEecCC--CChhHHHHHHHHhhhcccccc-cceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHH
Confidence 45789999999 88888888888888731 00 123566676662 2111 121 34566777888
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCC-----CCcceEEEeccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNL-----VKPTAIAAVAPT 203 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p-----~~v~~lvl~~p~ 203 (376)
+..++..|+..+ ...++.+|||||||.-...|+..+. ..++++|.++..
T Consensus 122 lk~~msyL~~~Y--~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 122 LKKAMSYLQKHY--NIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred HHHHHHHHHHhc--CCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 888887776555 4778999999999999999888432 247888888764
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.6e-07 Score=81.81 Aligned_cols=95 Identities=13% Similarity=0.113 Sum_probs=62.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC--cCCCCCCCC---CCHH---HHHHHHHHHHhCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL--GYSDRPKMD---YNAD---VMEKFVVDLINAPD 161 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~--G~S~~~~~~---~~~~---~~~~~l~~~l~~l~ 161 (376)
-|.|||-||.| +....|..+++.+++. ||-|.++|.||- |..+..... +... +-..|+..+++.|.
T Consensus 71 ~PlvvlshG~G--s~~~~f~~~A~~lAs~----Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~ 144 (365)
T COG4188 71 LPLVVLSHGSG--SYVTGFAWLAEHLASY----GFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALL 144 (365)
T ss_pred CCeEEecCCCC--CCccchhhhHHHHhhC----ceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHH
Confidence 46667779999 8888898999999997 999999999993 444321111 2211 11123332222221
Q ss_pred -------CCCCCCCCcEEEEecchHHHHHHHHHHhC
Q 017180 162 -------SPVSSSESDLVIFGGGHAATLTVRAAKKN 190 (376)
Q Consensus 162 -------~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~ 190 (376)
........+|.++|||+||..++..+...
T Consensus 145 ~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~ 180 (365)
T COG4188 145 QLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAE 180 (365)
T ss_pred HhhcCcccccccCccceEEEecccccHHHHHhcccc
Confidence 11122456899999999999999998743
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.8e-06 Score=71.28 Aligned_cols=122 Identities=9% Similarity=-0.034 Sum_probs=69.2
Q ss_pred CCceeEEEEecccCC---CCCC-CcEEEecCCCCCccchHhHHHHHHHHh-------hhCCcceEEEEeCCC-CCcCCCC
Q 017180 72 ENSINIYYEKHERES---PDPS-KNILMIPTISDVSTVEEWRLVAQDIVQ-------RVGKVNWRATIVDWP-GLGYSDR 139 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~---~~~~-~~vvllHG~~~~~~~~~~~~~~~~L~~-------~~~~~~~~Vi~~D~~-G~G~S~~ 139 (376)
..|.+|.|+..-+.. .+.- |.|||+||.+ ..+..-+. .+.+ ...+-++-|++|.+- =+-.++.
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgag--q~g~dn~~---~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~ 243 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAG--QGGSDNDK---VLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE 243 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCC--CCCchhhh---hhhcCccceeeecccCceEEEccccccccccccc
Confidence 346677777665421 1112 6789999988 54443322 3333 000012344444421 1222222
Q ss_pred CCCCCCHHHHHHHHH-HHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 140 PKMDYNADVMEKFVV-DLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 140 ~~~~~~~~~~~~~l~-~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
... .-.....+.+. .+.++.+ ....+++++|.|+||.-++.++.++|+.+.+.+++++.
T Consensus 244 ~t~-~~l~~~idli~~vlas~yn----ID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 244 KTL-LYLIEKIDLILEVLASTYN----IDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred ccc-hhHHHHHHHHHHHHhhccC----cccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 111 11222333333 2334443 34678999999999999999999999999999999873
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.46 E-value=7.6e-07 Score=80.58 Aligned_cols=106 Identities=7% Similarity=0.118 Sum_probs=57.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCC-C-C---------C-------C------CCC-
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYS-D-R---------P-------K------MDY- 144 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S-~-~---------~-------~------~~~- 144 (376)
=|.|||-||++ ++...+..++..|+.+ ||=|+++|.|..-.+ . . . . ...
T Consensus 100 ~PvvIFSHGlg--g~R~~yS~~~~eLAS~----GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (379)
T PF03403_consen 100 FPVVIFSHGLG--GSRTSYSAICGELASH----GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFD 173 (379)
T ss_dssp EEEEEEE--TT----TTTTHHHHHHHHHT----T-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----
T ss_pred CCEEEEeCCCC--cchhhHHHHHHHHHhC----CeEEEEeccCCCceeEEEeccCCCccccccccccccccceecccccc
Confidence 46788889999 9999999999999998 999999999954211 0 0 0 0 000
Q ss_pred CHHH----------HHHHHHHHH---hCCC--CC---------------CCCCCCcEEEEecchHHHHHHHHHHhCCCCc
Q 017180 145 NADV----------MEKFVVDLI---NAPD--SP---------------VSSSESDLVIFGGGHAATLTVRAAKKNLVKP 194 (376)
Q Consensus 145 ~~~~----------~~~~l~~~l---~~l~--~~---------------~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v 194 (376)
..+. -++++..++ +.++ .. ..+...++.++|||+||..++..+.+. .++
T Consensus 174 ~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~ 252 (379)
T PF03403_consen 174 PEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRF 252 (379)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT-
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCc
Confidence 0001 111222222 2111 00 001234699999999999999887765 578
Q ss_pred ceEEEecc
Q 017180 195 TAIAAVAP 202 (376)
Q Consensus 195 ~~lvl~~p 202 (376)
++.|+++|
T Consensus 253 ~~~I~LD~ 260 (379)
T PF03403_consen 253 KAGILLDP 260 (379)
T ss_dssp -EEEEES-
T ss_pred ceEEEeCC
Confidence 99999987
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=98.44 E-value=5.2e-05 Score=65.02 Aligned_cols=104 Identities=8% Similarity=0.025 Sum_probs=67.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
..|||+.||+++..+...+..+.+.+.+.- ++.+..+- .|-|. ....-....+.++.+.+-+..... ...
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~---~~pg~~v~-ig~~~--~~s~~~~~~~Qv~~vce~l~~~~~----L~~ 95 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHS---GYPGTCVE-IGNGV--QDSLFMPLRQQASIACEKIKQMKE----LSE 95 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCC---CCCeEEEE-ECCCc--ccccccCHHHHHHHHHHHHhcchh----hcC
Confidence 457999999996666667878887775210 44444443 22221 111223445555555555544221 134
Q ss_pred cEEEEecchHHHHHHHHHHhCCC--CcceEEEeccC
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLV--KPTAIAAVAPT 203 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~p~ 203 (376)
-+.++|+|-||.++-.++.+.|+ .|+.+|.+++.
T Consensus 96 G~naIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 96 GYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred ceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 59999999999999999999887 59999988753
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.41 E-value=2.2e-05 Score=72.93 Aligned_cols=123 Identities=17% Similarity=0.195 Sum_probs=73.1
Q ss_pred ceeEEEEecccCC-CCCCCcEEEecCCCCCccchHhHHHHH-------------------HHHhhhCCcceEEEEeCCC-
Q 017180 74 SINIYYEKHERES-PDPSKNILMIPTISDVSTVEEWRLVAQ-------------------DIVQRVGKVNWRATIVDWP- 132 (376)
Q Consensus 74 g~~l~y~~~g~~~-~~~~~~vvllHG~~~~~~~~~~~~~~~-------------------~L~~~~~~~~~~Vi~~D~~- 132 (376)
+.+++|.-....+ ++..|.||.+.|.+ +++..|..+.+ .+.+ ..+|+-+|.|
T Consensus 23 ~~~lfyw~~~s~~~~~~~Pl~~wlnGGP--G~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~-----~an~l~iD~Pv 95 (415)
T PF00450_consen 23 NAHLFYWFFESRNDPEDDPLILWLNGGP--GCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNK-----FANLLFIDQPV 95 (415)
T ss_dssp TEEEEEEEEE-SSGGCSS-EEEEEE-TT--TB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGG-----TSEEEEE--ST
T ss_pred CcEEEEEEEEeCCCCCCccEEEEecCCc--eeccccccccccCceEEeeccccccccccccccc-----ccceEEEeecC
Confidence 4466665544322 23378899999999 77666632211 1112 4779999955
Q ss_pred CCcCCCCCC---CCCCHHHHHHHHHHHHhCCCCCC-CCCCCcEEEEecchHHHHHHHHHH----hC------CCCcceEE
Q 017180 133 GLGYSDRPK---MDYNADVMEKFVVDLINAPDSPV-SSSESDLVIFGGGHAATLTVRAAK----KN------LVKPTAIA 198 (376)
Q Consensus 133 G~G~S~~~~---~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~lvG~S~Gg~ia~~~a~----~~------p~~v~~lv 198 (376)
|-|.|-... ...+.++.++++.++|...-... .....+++|.|-|.||..+-.+|. .. +-.+++++
T Consensus 96 GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~ 175 (415)
T PF00450_consen 96 GTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIA 175 (415)
T ss_dssp TSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEE
T ss_pred ceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccce
Confidence 999997322 24577888888887775431000 012568999999999998877766 22 45588999
Q ss_pred EeccC
Q 017180 199 AVAPT 203 (376)
Q Consensus 199 l~~p~ 203 (376)
+.+|.
T Consensus 176 IGng~ 180 (415)
T PF00450_consen 176 IGNGW 180 (415)
T ss_dssp EESE-
T ss_pred ecCcc
Confidence 98874
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.8e-06 Score=71.58 Aligned_cols=105 Identities=14% Similarity=0.094 Sum_probs=70.9
Q ss_pred CCcEEEecCCCCCccchHhHHHH--HHHHhhhCCcceEEEEeC-CCCC------cCCCCCC----CCCCHHHHHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVA--QDIVQRVGKVNWRATIVD-WPGL------GYSDRPK----MDYNADVMEKFVVDL 156 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~--~~L~~~~~~~~~~Vi~~D-~~G~------G~S~~~~----~~~~~~~~~~~l~~~ 156 (376)
.|.||.+||-. ++....+... +.|+++ .||-|+.+| ++++ |.+-.|. .......+++.+..+
T Consensus 61 apLvv~LHG~~--~sgag~~~~sg~d~lAd~---~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l 135 (312)
T COG3509 61 APLVVVLHGSG--GSGAGQLHGTGWDALADR---EGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKL 135 (312)
T ss_pred CCEEEEEecCC--CChHHhhcccchhhhhcc---cCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHH
Confidence 46788889999 7776666554 667664 379999995 2221 2221121 122223333444444
Q ss_pred HhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 157 INAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 157 l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
+.+.+ +...+|++.|.|-||.++..++..+|+.+.++..++..
T Consensus 136 ~~~~g----idp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~ 178 (312)
T COG3509 136 VNEYG----IDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGL 178 (312)
T ss_pred HHhcC----cCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecc
Confidence 44444 44678999999999999999999999999999988764
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.3e-06 Score=68.47 Aligned_cols=105 Identities=12% Similarity=0.105 Sum_probs=67.2
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC------------------CCCCCCCHHHHHHH
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD------------------RPKMDYNADVMEKF 152 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~------------------~~~~~~~~~~~~~~ 152 (376)
.+||++||.+ .+...|..++..|.-. +..-|+|-.|=.-.+. .+...-.....++.
T Consensus 4 atIi~LHglG--Dsg~~~~~~~~~l~l~----NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~ 77 (206)
T KOG2112|consen 4 ATIIFLHGLG--DSGSGWAQFLKQLPLP----NIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADN 77 (206)
T ss_pred EEEEEEecCC--CCCccHHHHHHcCCCC----CeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHH
Confidence 4699999999 8888887777666554 6777777444221111 01122233444555
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
+..++++.-... ....++.+-|.|+||.+++..+..+|..+.+++-..+
T Consensus 78 i~~Li~~e~~~G-i~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~ 126 (206)
T KOG2112|consen 78 IANLIDNEPANG-IPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSG 126 (206)
T ss_pred HHHHHHHHHHcC-CCccceeEcccCchHHHHHHHHhccccccceeecccc
Confidence 566665532110 1245688899999999999999998877777766554
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.8e-05 Score=67.82 Aligned_cols=104 Identities=8% Similarity=-0.028 Sum_probs=69.0
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
..|+|+.||+|+..+......+.+.+.+ .. |..|.++.. |.+.....-....+.++.+.+-+..... ...
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~-~~--g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~----l~~ 94 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTN-LS--GSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKE----LSQ 94 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHh-CC--CCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchh----hhC
Confidence 4579999999966555566666666643 11 566666543 4433333344555555555555544321 134
Q ss_pred cEEEEecchHHHHHHHHHHhCCC--CcceEEEeccC
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLV--KPTAIAAVAPT 203 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~p~ 203 (376)
-++++|+|-||.++-.++.+.|+ .|+.+|.+++.
T Consensus 95 G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 95 GYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred cEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 59999999999999999999987 59999988753
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.5e-05 Score=73.69 Aligned_cols=206 Identities=14% Similarity=0.030 Sum_probs=126.9
Q ss_pred CCcEEEecCCCCCc---cchHhHH--HHHHHHhhhCCcceEEEEeCCCCCcCCC-C-------CCCCCCHHHHHHHHHHH
Q 017180 90 SKNILMIPTISDVS---TVEEWRL--VAQDIVQRVGKVNWRATIVDWPGLGYSD-R-------PKMDYNADVMEKFVVDL 156 (376)
Q Consensus 90 ~~~vvllHG~~~~~---~~~~~~~--~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~-------~~~~~~~~~~~~~l~~~ 156 (376)
=|+++++-|.+... +...|.. =+..|+.. ||-|+.+|-||.-.-. + .-....+++.++-+.-+
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~Lasl----Gy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~L 717 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASL----GYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQML 717 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhc----ceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHH
Confidence 47899999988441 2222211 13456665 9999999999975432 1 11355678888888888
Q ss_pred HhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhh
Q 017180 157 INAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGW 236 (376)
Q Consensus 157 l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (376)
.++.+ ....++|.|-|+|.||.+++....++|+-++..|.-+|.. .+
T Consensus 718 aeq~g---fidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT------------------------------~W 764 (867)
T KOG2281|consen 718 AEQTG---FIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVT------------------------------DW 764 (867)
T ss_pred HHhcC---cccchheeEeccccccHHHHHHhhcCcceeeEEeccCcce------------------------------ee
Confidence 88876 2246789999999999999999999998777666655521 00
Q ss_pred HHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccC-CCcE
Q 017180 237 MMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEG-KLPL 315 (376)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~Pv 315 (376)
..+... -..+.+. .++.....| ..+ + +...+++++. +...
T Consensus 765 ~~YDTg-YTERYMg-------------~P~~nE~gY----------------~ag------S---V~~~VeklpdepnRL 805 (867)
T KOG2281|consen 765 RLYDTG-YTERYMG-------------YPDNNEHGY----------------GAG------S---VAGHVEKLPDEPNRL 805 (867)
T ss_pred eeeccc-chhhhcC-------------CCccchhcc----------------cch------h---HHHHHhhCCCCCceE
Confidence 001100 0011111 000000000 000 0 2222333321 4468
Q ss_pred EEEEeCCCCCCCHHHHHHH----hcccCCceEEEeCCC-CCC-CCCChHHHHHHHHHHHHhh
Q 017180 316 LVVSTEGSPRRSKAEMEAL----KGAKGVTKFVEVPGA-LLP-QEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 316 lii~G~~D~~~~~~~~~~~----~~~~~~~~~~~~~~~-H~~-~~e~pe~~~~~i~~fl~~~ 371 (376)
|++||--|.-|-..+..++ .++...-+++++|+- |.+ ..|..+-+-..|..||++.
T Consensus 806 lLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~~ 867 (867)
T KOG2281|consen 806 LLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQEN 867 (867)
T ss_pred EEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhhC
Confidence 9999999987765555544 456677899999999 996 4555666788899999863
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.30 E-value=0.00021 Score=63.58 Aligned_cols=103 Identities=10% Similarity=0.136 Sum_probs=65.9
Q ss_pred CCcEEEecCCCCCccchHhHHH---HHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLV---AQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFVVDLINAPDSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~---~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~ 165 (376)
+|.||++||.|.. ......+ +..+.+... ...++++|+.-..--+ .-.-+.-+.+..+....+++..+
T Consensus 122 DpVlIYlHGGGY~--l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G---- 193 (374)
T PF10340_consen 122 DPVLIYLHGGGYF--LGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEG---- 193 (374)
T ss_pred CcEEEEEcCCeeE--ecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccC----
Confidence 7899999998833 2222112 222222222 4689999987553000 11123445566666677776666
Q ss_pred CCCCcEEEEecchHHHHHHHHHH--hC---CCCcceEEEecc
Q 017180 166 SSESDLVIFGGGHAATLTVRAAK--KN---LVKPTAIAAVAP 202 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~--~~---p~~v~~lvl~~p 202 (376)
.+.++|+|-|.||.+++.+.+ +. ....+++||++|
T Consensus 194 --~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISP 233 (374)
T PF10340_consen 194 --NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISP 233 (374)
T ss_pred --CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECC
Confidence 678999999999999998876 11 234689999998
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.30 E-value=0.00017 Score=65.66 Aligned_cols=101 Identities=6% Similarity=-0.034 Sum_probs=68.9
Q ss_pred CCcEEEe-----cCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCC
Q 017180 90 SKNILMI-----PTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPV 164 (376)
Q Consensus 90 ~~~vvll-----HG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~ 164 (376)
++|+|.+ ||-|-.+-+. =..+-..|.. |+.|+.+... ..|...-|+++.......|++++....
T Consensus 68 krP~vViDPRAGHGpGIGGFK~-dSevG~AL~~-----GHPvYFV~F~-----p~P~pgQTl~DV~~ae~~Fv~~V~~~h 136 (581)
T PF11339_consen 68 KRPFVVIDPRAGHGPGIGGFKP-DSEVGVALRA-----GHPVYFVGFF-----PEPEPGQTLEDVMRAEAAFVEEVAERH 136 (581)
T ss_pred CCCeEEeCCCCCCCCCccCCCc-ccHHHHHHHc-----CCCeEEEEec-----CCCCCCCcHHHHHHHHHHHHHHHHHhC
Confidence 5566666 5533112221 1244556666 8998887654 334455688888888888887765222
Q ss_pred CCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 165 SSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 165 ~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
. ...+.+|+|..-||+.++.+|+.+|+++.-+|+...
T Consensus 137 p-~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGa 173 (581)
T PF11339_consen 137 P-DAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGA 173 (581)
T ss_pred C-CCCCceEEeccHHHHHHHHHHhcCcCccCceeecCC
Confidence 1 123899999999999999999999999988887643
|
Their function is unknown. |
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.2e-06 Score=76.51 Aligned_cols=100 Identities=5% Similarity=0.092 Sum_probs=79.6
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceE---EEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWR---ATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSS 166 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~---Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 166 (376)
.-++|++||++ .+...|..+...+... |+. ++.+++++- ... -......+++.+-+.+++...+
T Consensus 59 ~~pivlVhG~~--~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~-~~~-~~~~~~~~ql~~~V~~~l~~~g----- 125 (336)
T COG1075 59 KEPIVLVHGLG--GGYGNFLPLDYRLAIL----GWLTNGVYAFELSGG-DGT-YSLAVRGEQLFAYVDEVLAKTG----- 125 (336)
T ss_pred CceEEEEccCc--CCcchhhhhhhhhcch----HHHhccccccccccc-CCC-ccccccHHHHHHHHHHHHhhcC-----
Confidence 44899999998 8889998888887775 777 999999876 211 1234456667777777777776
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCC--CCcceEEEeccC
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNL--VKPTAIAAVAPT 203 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p--~~v~~lvl~~p~ 203 (376)
.+++.++||||||.+...++...+ .+|+.++.+++.
T Consensus 126 -a~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 126 -AKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred -CCceEEEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 688999999999999999988777 889999998763
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.24 E-value=6.9e-06 Score=67.70 Aligned_cols=59 Identities=8% Similarity=0.050 Sum_probs=51.6
Q ss_pred EEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCCCC-CCCCChHHHHHHHHHHHHhhcC
Q 017180 315 LLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALL-PQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 315 vlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
+.++.+++|..+|......+++..|++++..+++||. .++-+-+.+..+|.+-|++...
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~egGHVsayl~k~dlfRR~I~d~L~R~~k 368 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLEGGHVSAYLFKQDLFRRAIVDGLDRLDK 368 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEeecCceeeeehhchHHHHHHHHHHHhhhh
Confidence 4667889999999988889999999999999998888 6777888999999999988753
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.3e-06 Score=71.65 Aligned_cols=90 Identities=10% Similarity=0.089 Sum_probs=50.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH----HHHHHHhCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK----FVVDLINAPDSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~----~l~~~l~~l~~~~~ 165 (376)
.-.|||+||+. ++...|..+...+..... ++.--.+...++.... .....+++..++ .|.+.++...
T Consensus 4 ~hLvV~vHGL~--G~~~d~~~~~~~l~~~~~--~~~~~~i~~~~~~~n~-~~T~~gI~~~g~rL~~eI~~~~~~~~---- 74 (217)
T PF05057_consen 4 VHLVVFVHGLW--GNPADMRYLKNHLEKIPE--DLPNARIVVLGYSNNE-FKTFDGIDVCGERLAEEILEHIKDYE---- 74 (217)
T ss_pred CEEEEEeCCCC--CCHHHHHHHHHHHHHhhh--hcchhhhhhhcccccc-cccchhhHHHHHHHHHHHHHhccccc----
Confidence 45789999999 888889877777766100 1211122222221111 111233444444 4444444433
Q ss_pred CCCCcEEEEecchHHHHHHHHHH
Q 017180 166 SSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
....++++|||||||.++-.+..
T Consensus 75 ~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 75 SKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred cccccceEEEecccHHHHHHHHH
Confidence 11358999999999999876555
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.00029 Score=62.20 Aligned_cols=119 Identities=12% Similarity=0.235 Sum_probs=70.1
Q ss_pred EEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCC--CcCCCC--------------C
Q 017180 77 IYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPG--LGYSDR--------------P 140 (376)
Q Consensus 77 l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G--~G~S~~--------------~ 140 (376)
.-|+....+.. .-.||+|||.+ .+. .|-.++..|.+.+.+.||.++++.+|. ...... .
T Consensus 76 aL~~~~~~~~~--~G~vIilp~~g--~~~-d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~ 150 (310)
T PF12048_consen 76 ALWRPANSAKP--QGAVIILPDWG--EHP-DWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQ 150 (310)
T ss_pred EEEecccCCCC--ceEEEEecCCC--CCC-CcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCC
Confidence 34444444332 44799999998 553 344444455444444599999999987 111100 0
Q ss_pred CCC-------------CC----HHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCC-CCcceEEEecc
Q 017180 141 KMD-------------YN----ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNL-VKPTAIAAVAP 202 (376)
Q Consensus 141 ~~~-------------~~----~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p-~~v~~lvl~~p 202 (376)
... .. .+.+.+-|.+.+..+... ...+++|+||+.|+..++.+..+.+ ..++++|++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~---~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a 227 (310)
T PF12048_consen 151 LSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ---GGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINA 227 (310)
T ss_pred cCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeC
Confidence 000 00 112222333333333211 2556999999999999999988665 45899999998
Q ss_pred C
Q 017180 203 T 203 (376)
Q Consensus 203 ~ 203 (376)
.
T Consensus 228 ~ 228 (310)
T PF12048_consen 228 Y 228 (310)
T ss_pred C
Confidence 3
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.7e-05 Score=72.71 Aligned_cols=91 Identities=11% Similarity=0.018 Sum_probs=64.1
Q ss_pred HHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-------CCCCHHHHHHHHHHHHhCCCCCC-CCCCCcEEEEecchHHH
Q 017180 110 LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-------MDYNADVMEKFVVDLINAPDSPV-SSSESDLVIFGGGHAAT 181 (376)
Q Consensus 110 ~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-------~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~lvG~S~Gg~ 181 (376)
.++..|+++. |--||++.+|-||+|.+.. .-.|.++..+|+..|++.+.... .....|++++|.|.||+
T Consensus 49 ~~~~~lA~~~---~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~ 125 (434)
T PF05577_consen 49 GFMWELAKEF---GALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGA 125 (434)
T ss_dssp HHHHHHHHHH---TEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHH
T ss_pred ChHHHHHHHc---CCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhH
Confidence 3566777753 6899999999999997432 35788999999999887764221 11356899999999999
Q ss_pred HHHHHHHhCCCCcceEEEeccC
Q 017180 182 LTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 182 ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
+|.-+-.++|+.+.+.+.-++.
T Consensus 126 Laaw~r~kyP~~~~ga~ASSap 147 (434)
T PF05577_consen 126 LAAWFRLKYPHLFDGAWASSAP 147 (434)
T ss_dssp HHHHHHHH-TTT-SEEEEET--
T ss_pred HHHHHHhhCCCeeEEEEeccce
Confidence 9999999999999998887653
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00012 Score=60.03 Aligned_cols=79 Identities=11% Similarity=0.087 Sum_probs=51.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceE-EEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWR-ATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~-Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+..|||+.||| .+...+.++. +.+ ++. ++++|||-.-. .. + + . ..
T Consensus 11 ~~LilfF~GWg--~d~~~f~hL~--~~~-----~~D~l~~yDYr~l~~--------d~-----~---~-~--------~y 56 (213)
T PF04301_consen 11 KELILFFAGWG--MDPSPFSHLI--LPE-----NYDVLICYDYRDLDF--------DF-----D---L-S--------GY 56 (213)
T ss_pred CeEEEEEecCC--CChHHhhhcc--CCC-----CccEEEEecCccccc--------cc-----c---c-c--------cC
Confidence 34789999999 8877776542 122 344 55688873321 10 1 1 1 15
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
+.+.||++|||-.+|.++.... .++.-|.++++.
T Consensus 57 ~~i~lvAWSmGVw~A~~~l~~~--~~~~aiAINGT~ 90 (213)
T PF04301_consen 57 REIYLVAWSMGVWAANRVLQGI--PFKRAIAINGTP 90 (213)
T ss_pred ceEEEEEEeHHHHHHHHHhccC--CcceeEEEECCC
Confidence 6799999999999998876543 356777787653
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00027 Score=65.92 Aligned_cols=123 Identities=13% Similarity=-0.002 Sum_probs=78.3
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccc-hHh--HHHHH---HHHhhhCCcceEEEEeCCCCCcCCCCCCC-CC-
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTV-EEW--RLVAQ---DIVQRVGKVNWRATIVDWPGLGYSDRPKM-DY- 144 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~-~~~--~~~~~---~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~-~~- 144 (376)
||++|+...+-+...++.|+++..+-++..... ..+ ....+ .++.+ ||-|+..|.||.|.|+..-. .+
T Consensus 28 DGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~----GYavV~qDvRG~~~SeG~~~~~~~ 103 (563)
T COG2936 28 DGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQ----GYAVVNQDVRGRGGSEGVFDPESS 103 (563)
T ss_pred CCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecC----ceEEEEecccccccCCcccceecc
Confidence 588887666655443336777777833311221 011 11222 34554 99999999999999995432 22
Q ss_pred -CHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 145 -NADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 145 -~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
..++-.+.|..+.++- -...+|..+|.|++|...+.+|+..|..++.++...+..
T Consensus 104 ~E~~Dg~D~I~Wia~Qp-----WsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~ 159 (563)
T COG2936 104 REAEDGYDTIEWLAKQP-----WSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLV 159 (563)
T ss_pred ccccchhHHHHHHHhCC-----ccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccc
Confidence 2333333333333322 247889999999999999999998888888888776643
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.1e-05 Score=69.51 Aligned_cols=109 Identities=9% Similarity=-0.031 Sum_probs=62.0
Q ss_pred CCcEEEecCCCCCccchHh--HHHHHHHHhhhCCcceEEEEeCCCCCcCCC-----------CCCCCCCHHH----HHHH
Q 017180 90 SKNILMIPTISDVSTVEEW--RLVAQDIVQRVGKVNWRATIVDWPGLGYSD-----------RPKMDYNADV----MEKF 152 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~--~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-----------~~~~~~~~~~----~~~~ 152 (376)
=|+|+++||.. .....+ ...++.+.+...-...-|++++..+.+.-. ........+. +.++
T Consensus 24 ~PvlylldG~~--~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e 101 (251)
T PF00756_consen 24 YPVLYLLDGQS--GWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEE 101 (251)
T ss_dssp EEEEEEESHTT--HHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTH
T ss_pred CEEEEEccCCc--cccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhcc
Confidence 46777789964 333333 233444444210001456667766555110 0011111222 3344
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
|..+|++.- .....+..|+|+||||..|+.++.++|+.+.+++.++|.
T Consensus 102 l~p~i~~~~---~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 102 LIPYIEANY---RTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHHHHHS---SEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred chhHHHHhc---ccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 455554432 011222799999999999999999999999999999984
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00091 Score=57.07 Aligned_cols=57 Identities=11% Similarity=0.098 Sum_probs=46.9
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhc----ccCCceEEEeCCC-CCCCC-CChHHHHHHHHHHH
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKG----AKGVTKFVEVPGA-LLPQE-EYPAMVAQELYQFL 368 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~-H~~~~-e~pe~~~~~i~~fl 368 (376)
.+|-|+|.++.|.+++.+..+++.+ ..-+++...++++ |+.|. ++|+++.+++.+|+
T Consensus 178 ~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 178 RCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 7899999999999999887776642 3335788889999 99665 57999999999885
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.99 E-value=3.1e-05 Score=67.32 Aligned_cols=104 Identities=16% Similarity=0.244 Sum_probs=65.6
Q ss_pred CCcEEEecCCCCCccch-HhHHHHHHHHhhhCCcceEEEEeCCCCCcCC-----CCCCCCCCHHHHHHHHHHHHhCCCCC
Q 017180 90 SKNILMIPTISDVSTVE-EWRLVAQDIVQRVGKVNWRATIVDWPGLGYS-----DRPKMDYNADVMEKFVVDLINAPDSP 163 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~-~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S-----~~~~~~~~~~~~~~~l~~~l~~l~~~ 163 (376)
+..+||+||++ .+-. .-.+.++....... ....+.+-||--|.- ++....++...++..|..+.+...
T Consensus 116 k~vlvFvHGfN--ntf~dav~R~aqI~~d~g~--~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~-- 189 (377)
T COG4782 116 KTVLVFVHGFN--NTFEDAVYRTAQIVHDSGN--DGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKP-- 189 (377)
T ss_pred CeEEEEEcccC--CchhHHHHHHHHHHhhcCC--CcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCC--
Confidence 66889999998 4321 11223333333211 467888999976642 222234555555544554544443
Q ss_pred CCCCCCcEEEEecchHHHHHHHHHHh--------CCCCcceEEEeccC
Q 017180 164 VSSSESDLVIFGGGHAATLTVRAAKK--------NLVKPTAIAAVAPT 203 (376)
Q Consensus 164 ~~~~~~~~~lvG~S~Gg~ia~~~a~~--------~p~~v~~lvl~~p~ 203 (376)
.++++|++||||.++++....+ -+.+++-+||.+|.
T Consensus 190 ----~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 190 ----VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred ----CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 6789999999999999987662 34567888888884
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00022 Score=65.87 Aligned_cols=43 Identities=21% Similarity=0.173 Sum_probs=37.0
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhccc-CCceEEEeCCC-CCCCC
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAK-GVTKFVEVPGA-LLPQE 354 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~-H~~~~ 354 (376)
+.|+|+|.|.+|..++++..+.+++.. ...+++++.++ |-+-.
T Consensus 304 k~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 304 KQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAI 348 (784)
T ss_pred CCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccC
Confidence 889999999999999999999987654 45789999999 98654
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00088 Score=54.15 Aligned_cols=105 Identities=11% Similarity=0.017 Sum_probs=70.7
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+.-||||-|++.. -....-..+...|.+. +|.++-+-++-+- ..-...++.+-++||..++++++... ..
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~----~wslVq~q~~Ssy---~G~Gt~slk~D~edl~~l~~Hi~~~~--fS 106 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDEN----SWSLVQPQLRSSY---NGYGTFSLKDDVEDLKCLLEHIQLCG--FS 106 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhc----cceeeeeeccccc---cccccccccccHHHHHHHHHHhhccC--cc
Confidence 3468999998822 1233445666777775 8999998876321 00123456667889999999776211 13
Q ss_pred CcEEEEecchHHHHHHHHHH--hCCCCcceEEEeccC
Q 017180 169 SDLVIFGGGHAATLTVRAAK--KNLVKPTAIAAVAPT 203 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~--~~p~~v~~lvl~~p~ 203 (376)
..++|+|||.|+.=.+.|.. ..+..+.+.|+.+|.
T Consensus 107 t~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApV 143 (299)
T KOG4840|consen 107 TDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPV 143 (299)
T ss_pred cceEEEecCccchHHHHHHHhccchHHHHHHHHhCcc
Confidence 48999999999998888874 234467777777774
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0002 Score=60.88 Aligned_cols=41 Identities=2% Similarity=0.073 Sum_probs=36.6
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCC
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYS 137 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S 137 (376)
|.|||-||++ ++...|..+...|+.+ ||-|.++..|-+..+
T Consensus 119 PvvvFSHGLg--gsRt~YSa~c~~LASh----G~VVaavEHRD~SA~ 159 (399)
T KOG3847|consen 119 PVVVFSHGLG--GSRTLYSAYCTSLASH----GFVVAAVEHRDRSAC 159 (399)
T ss_pred cEEEEecccc--cchhhHHHHhhhHhhC----ceEEEEeecccCcce
Confidence 6778889999 9999999999999998 999999999987544
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.80 E-value=8.7e-05 Score=67.87 Aligned_cols=86 Identities=8% Similarity=0.066 Sum_probs=61.0
Q ss_pred HhHHHHHHHHhhhCCcceE----EE--EeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHH
Q 017180 107 EWRLVAQDIVQRVGKVNWR----AT--IVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAA 180 (376)
Q Consensus 107 ~~~~~~~~L~~~~~~~~~~----Vi--~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg 180 (376)
.|..+++.|.+. ||. ++ -+|+|=-- ...+.+...|..+|+..... ..++++||||||||
T Consensus 66 ~~~~li~~L~~~----GY~~~~~l~~~pYDWR~~~--------~~~~~~~~~lk~~ie~~~~~---~~~kv~li~HSmGg 130 (389)
T PF02450_consen 66 YFAKLIENLEKL----GYDRGKDLFAAPYDWRLSP--------AERDEYFTKLKQLIEEAYKK---NGKKVVLIAHSMGG 130 (389)
T ss_pred hHHHHHHHHHhc----CcccCCEEEEEeechhhch--------hhHHHHHHHHHHHHHHHHHh---cCCcEEEEEeCCCc
Confidence 899999999875 544 22 26777211 13446666777776665311 26899999999999
Q ss_pred HHHHHHHHhCCC------CcceEEEeccCCCCC
Q 017180 181 TLTVRAAKKNLV------KPTAIAAVAPTWAGP 207 (376)
Q Consensus 181 ~ia~~~a~~~p~------~v~~lvl~~p~~~~~ 207 (376)
.++..+....+. .|+++|.+++++.|.
T Consensus 131 l~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 131 LVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred hHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 999998886543 599999999876554
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00043 Score=63.63 Aligned_cols=112 Identities=10% Similarity=0.015 Sum_probs=62.0
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC-cCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-GYSD-RPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~-G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
-|.|+|+||-........+ ..++.|.+.....-.-|+.+|-.+- .++. -+....-.+.+.++|.-++++.- +....
T Consensus 209 ~PvlyllDG~~w~~~~~~~-~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y-~~~~d 286 (411)
T PRK10439 209 RPLAILLDGQFWAESMPVW-PALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIA-PFSDD 286 (411)
T ss_pred CCEEEEEECHHhhhcCCHH-HHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhC-CCCCC
Confidence 5777888995411222222 3444554431000134677775321 1111 11111111223344444554431 11112
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.+..+|+|+||||..|+.++.++|+.+.+++..+|.
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 456889999999999999999999999999999984
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00022 Score=54.95 Aligned_cols=87 Identities=16% Similarity=0.169 Sum_probs=61.6
Q ss_pred EEEecCCCCCccchHhHHHH--HHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 93 ILMIPTISDVSTVEEWRLVA--QDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 93 vvllHG~~~~~~~~~~~~~~--~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
||+||||. ++......+. +.+.. |.|-.+.|. |.....+...++.+..++.+++ .+.
T Consensus 2 ilYlHGFn--SSP~shka~l~~q~~~~------------~~~~i~y~~-p~l~h~p~~a~~ele~~i~~~~------~~~ 60 (191)
T COG3150 2 ILYLHGFN--SSPGSHKAVLLLQFIDE------------DVRDIEYST-PHLPHDPQQALKELEKAVQELG------DES 60 (191)
T ss_pred eEEEecCC--CCcccHHHHHHHHHHhc------------cccceeeec-CCCCCCHHHHHHHHHHHHHHcC------CCC
Confidence 89999999 7776665432 22222 333333343 2344667888899999999987 666
Q ss_pred EEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 171 LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
..|||.|+||..|..++.++-- +-|+++|.
T Consensus 61 p~ivGssLGGY~At~l~~~~Gi---rav~~NPa 90 (191)
T COG3150 61 PLIVGSSLGGYYATWLGFLCGI---RAVVFNPA 90 (191)
T ss_pred ceEEeecchHHHHHHHHHHhCC---hhhhcCCC
Confidence 8999999999999999998643 34667774
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00027 Score=51.37 Aligned_cols=61 Identities=18% Similarity=0.174 Sum_probs=53.5
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
..|+|+|.++.|+..|.+..+.+.+.+++++++.+++. |..+...-.-+.+.+.+||.+-.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G~ 95 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDGT 95 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHcCC
Confidence 57999999999999999999999999999999999998 99876444557888999998653
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00032 Score=61.69 Aligned_cols=68 Identities=22% Similarity=0.297 Sum_probs=50.3
Q ss_pred HHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC--CceEEEeCCC-CCCCCCChH---HHHHHHHHHHHhhc
Q 017180 304 QLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG--VTKFVEVPGA-LLPQEEYPA---MVAQELYQFLQQTF 372 (376)
Q Consensus 304 ~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~-H~~~~e~pe---~~~~~i~~fl~~~~ 372 (376)
..+.++. .+|+|+++|++|..+|....+.+..... +.+...++++ |......+. +....+.+|+.+.+
T Consensus 225 ~~~~~i~-~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 225 DDAEKIS-PRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred hhHhhcC-CcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 3445551 2799999999999999888887754333 4677888888 997754433 68888999998764
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00019 Score=68.27 Aligned_cols=107 Identities=13% Similarity=0.091 Sum_probs=62.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHh------------hhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQ------------RVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLI 157 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~------------~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l 157 (376)
|-||+||+|.. ++..+-+.++..... ......|+.+++|+-+= = ..-...+..+.++-+.+.|
T Consensus 89 GIPVLFIPGNA--GSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe--~-tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 89 GIPVLFIPGNA--GSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE--F-TAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CceEEEecCCC--CchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch--h-hhhccHhHHHHHHHHHHHH
Confidence 77999999999 888888777665552 01112466777776430 0 0012334555555555444
Q ss_pred hCC----CC---CCCCCCCcEEEEecchHHHHHHHHHH---hCCCCcceEEEec
Q 017180 158 NAP----DS---PVSSSESDLVIFGGGHAATLTVRAAK---KNLVKPTAIAAVA 201 (376)
Q Consensus 158 ~~l----~~---~~~~~~~~~~lvG~S~Gg~ia~~~a~---~~p~~v~~lvl~~ 201 (376)
+.. .. ........|++|||||||.+|...+. ..+..|.-++..+
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITls 217 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLS 217 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhc
Confidence 322 11 11122556999999999999987665 2344455555443
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00024 Score=67.62 Aligned_cols=107 Identities=8% Similarity=-0.017 Sum_probs=65.8
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCC----CCcCCCCC--CCCCCHHHHHHHHHHH---HhC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWP----GLGYSDRP--KMDYNADVMEKFVVDL---INA 159 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~----G~G~S~~~--~~~~~~~~~~~~l~~~---l~~ 159 (376)
.|.||+|||.+.. ++...+ ....|....+ ++-|+.+++| |++.+... .....+.+....+..+ ++.
T Consensus 95 ~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~--~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 95 LPVMVWIHGGGFMFGSGSLY--PGDGLAREGD--NVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCEEEEEcCCccccCCCCCC--ChHHHHhcCC--CEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 6889999996522 122222 2344544311 3999999999 34333211 1234445554444433 444
Q ss_pred CCCCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccCC
Q 017180 160 PDSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPTW 204 (376)
Q Consensus 160 l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~~ 204 (376)
.+ +...+|.|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 171 fg----gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 171 FG----GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred hC----CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 44 346789999999999999888774 345688889887643
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.012 Score=49.41 Aligned_cols=102 Identities=7% Similarity=-0.044 Sum_probs=70.2
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
.|+|++||+++..+......+.+.+.+ +. |..|+++|. |-| .+...-....+.++...+.++... ...+-
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~-~~--g~~v~~lei-g~g--~~~s~l~pl~~Qv~~~ce~v~~m~----~lsqG 93 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEE-LP--GSPVYCLEI-GDG--IKDSSLMPLWEQVDVACEKVKQMP----ELSQG 93 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHh-CC--CCeeEEEEe-cCC--cchhhhccHHHHHHHHHHHHhcch----hccCc
Confidence 579999999955444558888888887 33 899999986 333 111223345566666666665432 12456
Q ss_pred EEEEecchHHHHHHHHHHhCCC-CcceEEEecc
Q 017180 171 LVIFGGGHAATLTVRAAKKNLV-KPTAIAAVAP 202 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~p 202 (376)
+.++|.|-||.++-.++...++ .|..+|.+++
T Consensus 94 ynivg~SQGglv~Raliq~cd~ppV~n~ISL~g 126 (296)
T KOG2541|consen 94 YNIVGYSQGGLVARALIQFCDNPPVKNFISLGG 126 (296)
T ss_pred eEEEEEccccHHHHHHHHhCCCCCcceeEeccC
Confidence 9999999999999999995443 4778888765
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00049 Score=63.79 Aligned_cols=124 Identities=17% Similarity=0.084 Sum_probs=82.6
Q ss_pred cCCceeEEEEecccC-CCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC--------CC
Q 017180 71 KENSINIYYEKHERE-SPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR--------PK 141 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~-~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~--------~~ 141 (376)
..||.+|.|...+.+ ..++.|++|+--|.....-.-.|...+...-++ |.-.+.-..||=|+=.+ .+
T Consensus 401 SkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLer----Gg~~v~ANIRGGGEfGp~WH~Aa~k~n 476 (648)
T COG1505 401 SKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLER----GGVFVLANIRGGGEFGPEWHQAGMKEN 476 (648)
T ss_pred cCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhc----CCeEEEEecccCCccCHHHHHHHhhhc
Confidence 557999988777522 112367776664433122233454555555554 77778889999876531 12
Q ss_pred CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 142 MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 142 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
.....+++.+...++++.-. ...+++.+.|.|=||.+.-....++|+.+.++|.-.|
T Consensus 477 rq~vfdDf~AVaedLi~rgi----tspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evP 533 (648)
T COG1505 477 KQNVFDDFIAVAEDLIKRGI----TSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVP 533 (648)
T ss_pred chhhhHHHHHHHHHHHHhCC----CCHHHhhhccCCCCceEEEeeeccChhhhCceeeccc
Confidence 34556677777777776643 2356789999999999998888899999998887776
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00078 Score=59.61 Aligned_cols=105 Identities=13% Similarity=0.044 Sum_probs=76.2
Q ss_pred CcEEEecCCCCCccchHhHH---HHHHHHhhhCCcceEEEEeCCCCCcCCCCCC----------CCCCHHHHHHHHHHHH
Q 017180 91 KNILMIPTISDVSTVEEWRL---VAQDIVQRVGKVNWRATIVDWPGLGYSDRPK----------MDYNADVMEKFVVDLI 157 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~---~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~----------~~~~~~~~~~~l~~~l 157 (376)
-||+|--|.- ++.+.|.. ++..++.+ .+.-+|-...|=||+|-+-. .-.+.++-.+|...++
T Consensus 81 gPIffYtGNE--Gdie~Fa~ntGFm~D~Ap~---~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll 155 (492)
T KOG2183|consen 81 GPIFFYTGNE--GDIEWFANNTGFMWDLAPE---LKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELL 155 (492)
T ss_pred CceEEEeCCc--ccHHHHHhccchHHhhhHh---hCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHH
Confidence 4699999988 76666543 23334432 26789999999999996321 2356677777777777
Q ss_pred hCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEe
Q 017180 158 NAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAV 200 (376)
Q Consensus 158 ~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~ 200 (376)
..+.........+|+++|.|.||+++.-+=.++|..|.+....
T Consensus 156 ~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAa 198 (492)
T KOG2183|consen 156 TFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAA 198 (492)
T ss_pred HHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhc
Confidence 7776433334678999999999999999999999987775544
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.015 Score=52.18 Aligned_cols=33 Identities=15% Similarity=0.060 Sum_probs=28.9
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEec
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVA 201 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~ 201 (376)
-|++++|+|.||.+|...|.-.|-.+++++=-+
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns 216 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNS 216 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecC
Confidence 489999999999999999999999888776444
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.077 Score=49.27 Aligned_cols=58 Identities=9% Similarity=0.021 Sum_probs=44.3
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhccc------------------------CC-ceEEEeCCC-CCCCCCChHHHHHHHH
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAK------------------------GV-TKFVEVPGA-LLPQEEYPAMVAQELY 365 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~~~~~-H~~~~e~pe~~~~~i~ 365 (376)
..+|||..|+.|.+|+.-..+.+.+.+ .+ .+++.+.++ |++. .+|+...+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 469999999999988865555432111 22 677888888 9986 58999999999
Q ss_pred HHHHh
Q 017180 366 QFLQQ 370 (376)
Q Consensus 366 ~fl~~ 370 (376)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99965
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.027 Score=52.24 Aligned_cols=58 Identities=12% Similarity=0.099 Sum_probs=44.8
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcc------------------------cCC-ceEEEeCCC-CCCCCCChHHHHHHHH
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGA------------------------KGV-TKFVEVPGA-LLPQEEYPAMVAQELY 365 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~------------------------~~~-~~~~~~~~~-H~~~~e~pe~~~~~i~ 365 (376)
.++||+..|+.|.+|+.-..+.+... ..+ .+++.+.++ |++. .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 46999999999998886555544211 133 678888888 9985 59999999999
Q ss_pred HHHHh
Q 017180 366 QFLQQ 370 (376)
Q Consensus 366 ~fl~~ 370 (376)
.|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00046 Score=58.85 Aligned_cols=108 Identities=6% Similarity=-0.028 Sum_probs=57.5
Q ss_pred CCcEEEecCCCCCc-cchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVS-TVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~-~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
..|||+.||+|+.. +...+..+...+.+... |--|..+++-.-..++ ....-..+.+.++.+.+.++.... .
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~P--G~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~----L 78 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHP--GTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLANDPE----L 78 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHST--T--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GG----G
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCC--CceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhhChh----h
Confidence 45899999999432 23356665555555433 7788888873222112 111123345555555555544210 1
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCC-CcceEEEeccC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLV-KPTAIAAVAPT 203 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~p~ 203 (376)
..-++++|+|-||.++-.++.+++. .|+.+|.+++.
T Consensus 79 ~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 79 ANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp TT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred hcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 2459999999999999999998864 58999988753
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0095 Score=50.27 Aligned_cols=37 Identities=11% Similarity=0.047 Sum_probs=33.8
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
..++-.++|||+||.+++.....+|+.+...++++|.
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 3556899999999999999999999999999999994
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.011 Score=50.61 Aligned_cols=125 Identities=8% Similarity=0.017 Sum_probs=69.7
Q ss_pred eeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHH
Q 017180 75 INIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFV 153 (376)
Q Consensus 75 ~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l 153 (376)
..+.|...|.....+-|.++++||-....+...++-+-..+.+. .-..--+|.+|.-- .. +....+..+++.+.|
T Consensus 83 ~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g-~i~pai~vgid~~d---~~~R~~~~~~n~~~~~~L 158 (299)
T COG2382 83 RRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAG-EIPPAILVGIDYID---VKKRREELHCNEAYWRFL 158 (299)
T ss_pred eEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcC-CCCCceEEecCCCC---HHHHHHHhcccHHHHHHH
Confidence 34566666654444457788889954224445554433333331 11135566666532 11 111122333333333
Q ss_pred H-HHHhCCCCCCC--CCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 154 V-DLINAPDSPVS--SSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 154 ~-~~l~~l~~~~~--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
. +++-.+...+. .....-+|+|.|+||.+++..+..+|+.+-.++..+|.
T Consensus 159 ~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps 211 (299)
T COG2382 159 AQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGS 211 (299)
T ss_pred HHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCc
Confidence 2 33322221110 11344688999999999999999999999999999885
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.019 Score=51.58 Aligned_cols=62 Identities=16% Similarity=0.091 Sum_probs=49.5
Q ss_pred HhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC-CceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 306 FADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG-VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 306 ~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
..++ .+|.++|.|..|.+..+.....+...+| ...+..+|++ |.... ..+.+.|..|+....
T Consensus 258 ~~rL--~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~ 321 (367)
T PF10142_consen 258 RDRL--TMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRIQ 321 (367)
T ss_pred HHhc--CccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHHH
Confidence 3566 8899999999999887777777765555 5678899999 99766 567888999988753
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0023 Score=58.43 Aligned_cols=106 Identities=13% Similarity=0.031 Sum_probs=65.9
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcc-eEEEEeCCCC--CcCCC--------CCCCCCCHHHHHHHH---H
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVN-WRATIVDWPG--LGYSD--------RPKMDYNADVMEKFV---V 154 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~-~~Vi~~D~~G--~G~S~--------~~~~~~~~~~~~~~l---~ 154 (376)
.|++|+|||.+.. ++...-..--..|+++ | +-|+.+++|= +|.=+ .......+.+....| .
T Consensus 94 ~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~----g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~ 169 (491)
T COG2272 94 LPVMVYIHGGGYIMGSGSEPLYDGSALAAR----GDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVR 169 (491)
T ss_pred CcEEEEEeccccccCCCcccccChHHHHhc----CCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHH
Confidence 6899999996633 2333322334567765 5 8888888772 22211 111123444544443 4
Q ss_pred HHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH--hCCCCcceEEEeccC
Q 017180 155 DLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK--KNLVKPTAIAAVAPT 203 (376)
Q Consensus 155 ~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~--~~p~~v~~lvl~~p~ 203 (376)
+-|++.| ...+.|.|+|+|-|++.++.+.+ .....++++|+.++.
T Consensus 170 ~NIe~FG----GDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~ 216 (491)
T COG2272 170 DNIEAFG----GDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGA 216 (491)
T ss_pred HHHHHhC----CCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCC
Confidence 5567776 34678999999999998887765 233457778888874
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.12 Score=47.73 Aligned_cols=122 Identities=12% Similarity=0.040 Sum_probs=73.0
Q ss_pred EEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhC--------------CcceEEEEeC-CCCCcCCC--C
Q 017180 77 IYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVG--------------KVNWRATIVD-WPGLGYSD--R 139 (376)
Q Consensus 77 l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~--------------~~~~~Vi~~D-~~G~G~S~--~ 139 (376)
.+|.-.++..+...|.|+.+.|.+ +++..|-.+.+.=..+.+ ...-.++-+| .-|-|.|. .
T Consensus 88 ffy~fe~~ndp~~rPvi~wlNGGP--GcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~ 165 (498)
T COG2939 88 FFYTFESPNDPANRPVIFWLNGGP--GCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALG 165 (498)
T ss_pred EEEEecCCCCCCCCceEEEecCCC--ChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccc
Confidence 355555544444478899999999 877777554321100000 0024688999 66888887 3
Q ss_pred CCCCCCHHHHHHHHHHHHh-------CCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCC---CcceEEEeccCC
Q 017180 140 PKMDYNADVMEKFVVDLIN-------APDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV---KPTAIAAVAPTW 204 (376)
Q Consensus 140 ~~~~~~~~~~~~~l~~~l~-------~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~p~~ 204 (376)
....-+.....+|+..+.+ +.. ....+.+|+|-|.||..+..+|..-.+ ..++++++.+..
T Consensus 166 ~e~~~d~~~~~~D~~~~~~~f~~~fp~~~----r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 166 DEKKKDFEGAGKDVYSFLRLFFDKFPHYA----RLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred cccccchhccchhHHHHHHHHHHHHHHHh----hhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 3333444444555544332 222 124589999999999999998884222 356777765543
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0068 Score=58.39 Aligned_cols=107 Identities=9% Similarity=-0.093 Sum_probs=61.9
Q ss_pred CCcEEEecCCCCCccch--HhHHHHHHHHhhhCCcceEEEEeCCCC----CcCCCC---CCCCCCHHHHHHHHH---HHH
Q 017180 90 SKNILMIPTISDVSTVE--EWRLVAQDIVQRVGKVNWRATIVDWPG----LGYSDR---PKMDYNADVMEKFVV---DLI 157 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~--~~~~~~~~L~~~~~~~~~~Vi~~D~~G----~G~S~~---~~~~~~~~~~~~~l~---~~l 157 (376)
-|++|+|||.+....+. ....-...+.+. +.=||.+.||= |-.+.. +...+.+.|+...|. +-|
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~----~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI 200 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASK----DVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNI 200 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHH----TSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHG
T ss_pred cceEEEeecccccCCCcccccccccccccCC----CEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhh
Confidence 48899999966332222 222233444454 89999999883 222221 113455556555555 345
Q ss_pred hCCCCCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccCC
Q 017180 158 NAPDSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPTW 204 (376)
Q Consensus 158 ~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~~ 204 (376)
...| +..++|.|+|||.||..+..+... ....+++.|+.++..
T Consensus 201 ~~FG----GDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 201 AAFG----GDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp GGGT----EEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhcc----cCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 5565 335679999999999999887773 345799999998753
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.025 Score=45.66 Aligned_cols=109 Identities=17% Similarity=0.171 Sum_probs=64.4
Q ss_pred CCcEEEecCCCCCccchHhHH--HHHHHHhhhCCcceEEEEeCC--CCC---cCCCCCC--------CCCCHHHHHH---
Q 017180 90 SKNILMIPTISDVSTVEEWRL--VAQDIVQRVGKVNWRATIVDW--PGL---GYSDRPK--------MDYNADVMEK--- 151 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~--~~~~L~~~~~~~~~~Vi~~D~--~G~---G~S~~~~--------~~~~~~~~~~--- 151 (376)
-|++.++-|+. .+...|-. -.+..+.. .|+-|+++|- ||. |+++.-+ ...+.|-|++
T Consensus 44 ~P~lf~LSGLT--CT~~Nfi~Ksg~qq~As~---hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yr 118 (283)
T KOG3101|consen 44 CPVLFYLSGLT--CTHENFIEKSGFQQQASK---HGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYR 118 (283)
T ss_pred CceEEEecCCc--ccchhhHhhhhHHHhHhh---cCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhh
Confidence 47788889998 77665522 22222222 2899999994 553 2222000 1122222222
Q ss_pred ----HHHHHHhCCC-CCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 152 ----FVVDLINAPD-SPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 152 ----~l~~~l~~l~-~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
...++.+.+. ....+...++.+.||||||.=|+..+.++|.+.+++-..+|.
T Consensus 119 MYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI 175 (283)
T KOG3101|consen 119 MYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPI 175 (283)
T ss_pred HHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccc
Confidence 1223333332 111223556899999999999999999999998888777763
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.56 Score=43.55 Aligned_cols=126 Identities=16% Similarity=0.119 Sum_probs=72.6
Q ss_pred CceeEEEEecccC-CCCCCCcEEEecCCCCCccchHhHHHHHHHHh----hhC----------CcceEEEEeCCC-CCcC
Q 017180 73 NSINIYYEKHERE-SPDPSKNILMIPTISDVSTVEEWRLVAQDIVQ----RVG----------KVNWRATIVDWP-GLGY 136 (376)
Q Consensus 73 ~g~~l~y~~~g~~-~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~----~~~----------~~~~~Vi~~D~~-G~G~ 136 (376)
.+..++|.-.... +++.+|.||.+-|.+ +++..- -++.++.- ..| +.-.+++-+|.| |-|.
T Consensus 55 ~~~~LFYwf~eS~~~P~~dPlvLWLnGGP--GCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGF 131 (454)
T KOG1282|consen 55 EGRQLFYWFFESENNPETDPLVLWLNGGP--GCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGF 131 (454)
T ss_pred CCceEEEEEEEccCCCCCCCEEEEeCCCC--Cccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCc
Confidence 3677887655442 334478999999999 554332 22222210 000 002568888866 6777
Q ss_pred CC-CCCC--CCCHHHHHHHHHHHH----hCCCCCCCCCCCcEEEEecchHHHHHHHHHH----hC------CCCcceEEE
Q 017180 137 SD-RPKM--DYNADVMEKFVVDLI----NAPDSPVSSSESDLVIFGGGHAATLTVRAAK----KN------LVKPTAIAA 199 (376)
Q Consensus 137 S~-~~~~--~~~~~~~~~~l~~~l----~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~----~~------p~~v~~lvl 199 (376)
|= .... ..+-+..++|+..++ ++.-+ ...++++|.|-|.+|...-.+|. .. +..++++++
T Consensus 132 SYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPe---y~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~I 208 (454)
T KOG1282|consen 132 SYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPE---YKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAI 208 (454)
T ss_pred cccCCCCcCcCCcHHHHHHHHHHHHHHHHhChh---hcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEe
Confidence 64 2111 223344555555444 43321 13678999999999987777766 21 245788888
Q ss_pred eccCC
Q 017180 200 VAPTW 204 (376)
Q Consensus 200 ~~p~~ 204 (376)
-+|..
T Consensus 209 GNg~t 213 (454)
T KOG1282|consen 209 GNGLT 213 (454)
T ss_pred cCccc
Confidence 77743
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0036 Score=48.32 Aligned_cols=37 Identities=22% Similarity=0.259 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
+...+.+..++++.. ..++++.|||+||.+|..++..
T Consensus 48 ~~~~~~l~~~~~~~~------~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 48 DQILDALKELVEKYP------DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHST------TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccc------CccchhhccchHHHHHHHHHHh
Confidence 344556666666654 5789999999999999998883
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0059 Score=48.00 Aligned_cols=35 Identities=11% Similarity=0.095 Sum_probs=27.3
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCC----CcceEEEecc
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLV----KPTAIAAVAP 202 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~----~v~~lvl~~p 202 (376)
..+++++|||+||.+|..++..... .+..++..++
T Consensus 27 ~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~ 65 (153)
T cd00741 27 DYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGP 65 (153)
T ss_pred CCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCC
Confidence 6789999999999999999886543 4555666655
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0043 Score=56.27 Aligned_cols=88 Identities=10% Similarity=0.161 Sum_probs=55.1
Q ss_pred hHhHHHHHHHHhhhCCcceE------EEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchH
Q 017180 106 EEWRLVAQDIVQRVGKVNWR------ATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHA 179 (376)
Q Consensus 106 ~~~~~~~~~L~~~~~~~~~~------Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~G 179 (376)
..|..+++.|..- ||. -..+|+|=.= ......+..+..+..-++...+.-+ ++|++|++||||
T Consensus 124 ~~w~~~i~~lv~~----GYe~~~~l~ga~YDwRls~-~~~e~rd~yl~kLK~~iE~~~~~~G------~kkVvlisHSMG 192 (473)
T KOG2369|consen 124 WYWHELIENLVGI----GYERGKTLFGAPYDWRLSY-HNSEERDQYLSKLKKKIETMYKLNG------GKKVVLISHSMG 192 (473)
T ss_pred HHHHHHHHHHHhh----CcccCceeeccccchhhcc-CChhHHHHHHHHHHHHHHHHHHHcC------CCceEEEecCCc
Confidence 4899999999885 776 4557877311 1111122233333333333333333 599999999999
Q ss_pred HHHHHHHHHhCCC--------CcceEEEeccCC
Q 017180 180 ATLTVRAAKKNLV--------KPTAIAAVAPTW 204 (376)
Q Consensus 180 g~ia~~~a~~~p~--------~v~~lvl~~p~~ 204 (376)
+.+.+.+...+++ .+++.+-++..+
T Consensus 193 ~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 193 GLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred cHHHHHHHhcccccchhHHHHHHHHHHccCchh
Confidence 9999999987766 255555555444
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.015 Score=53.17 Aligned_cols=108 Identities=16% Similarity=0.134 Sum_probs=75.8
Q ss_pred CCcEEEecCCCCCccchHhH----HHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-------CCCCHHHHHHHHHHHHh
Q 017180 90 SKNILMIPTISDVSTVEEWR----LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-------MDYNADVMEKFVVDLIN 158 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~----~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-------~~~~~~~~~~~l~~~l~ 158 (376)
+|.-|+|-|=+ .....|- .....++++. |-.|+-+.+|=||.|.+.. .-.+.++...|+..||+
T Consensus 86 gPiFLmIGGEg--p~~~~wv~~~~~~~~~~Akkf---gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~ 160 (514)
T KOG2182|consen 86 GPIFLMIGGEG--PESDKWVGNENLTWLQWAKKF---GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIK 160 (514)
T ss_pred CceEEEEcCCC--CCCCCccccCcchHHHHHHHh---CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHH
Confidence 56667776655 3333331 1223333321 7899999999999986322 24577888899999999
Q ss_pred CCCCCCCCCC-CcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 159 APDSPVSSSE-SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 159 ~l~~~~~~~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
+++....... .+++.+|.|.-|.++.-+=+.+|+.+.+-|.-+.
T Consensus 161 ~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSa 205 (514)
T KOG2182|consen 161 AMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSA 205 (514)
T ss_pred HHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccc
Confidence 8864332222 3899999999999999999999999888776543
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.013 Score=48.86 Aligned_cols=105 Identities=9% Similarity=0.047 Sum_probs=59.0
Q ss_pred CCcEEEecCCC-CCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTIS-DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~-~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.-.|-|+-|.. +..-.-.|+.+.+.|+++ ||.|++.-+. .|.-.......-.+.+...+..+.+..+... ..
T Consensus 17 ~gvihFiGGaf~ga~P~itYr~lLe~La~~----Gy~ViAtPy~-~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~--~~ 89 (250)
T PF07082_consen 17 KGVIHFIGGAFVGAAPQITYRYLLERLADR----GYAVIATPYV-VTFDHQAIAREVWERFERCLRALQKRGGLDP--AY 89 (250)
T ss_pred CEEEEEcCcceeccCcHHHHHHHHHHHHhC----CcEEEEEecC-CCCcHHHHHHHHHHHHHHHHHHHHHhcCCCc--cc
Confidence 33566666633 123345788999999997 9999997664 1211000000011112222222222221110 12
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEec
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVA 201 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~ 201 (376)
-+++-+|||+|+.+-+.+...+...-++.|+++
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred CCeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 467889999999999998877665556777775
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.072 Score=50.34 Aligned_cols=106 Identities=18% Similarity=0.132 Sum_probs=71.9
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC---C-----CCCCCHHHHHHHHHHHHhCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR---P-----KMDYNADVMEKFVVDLINAPD 161 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~---~-----~~~~~~~~~~~~l~~~l~~l~ 161 (376)
+|.+|..||.-+.+-.-.|+.--..|.++ |+-....|.||=|+-.. . ....+++++..-.+-+++.--
T Consensus 470 ~P~LLygYGay~isl~p~f~~srl~lld~----G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gy 545 (712)
T KOG2237|consen 470 KPLLLYGYGAYGISLDPSFRASRLSLLDR----GWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGY 545 (712)
T ss_pred CceEEEEecccceeeccccccceeEEEec----ceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCC
Confidence 45555556533222223454333334444 88888889999775431 1 135567777777777776542
Q ss_pred CCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 162 SPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 162 ~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
....+..+.|.|-||.++..+..++|+++.++|+-.|.
T Consensus 546 ----t~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpf 583 (712)
T KOG2237|consen 546 ----TQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPF 583 (712)
T ss_pred ----CCccceeEecccCccchhHHHhccCchHhhhhhhcCcc
Confidence 34678999999999999999999999999999988774
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0043 Score=58.23 Aligned_cols=93 Identities=10% Similarity=0.027 Sum_probs=56.1
Q ss_pred hHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC--CCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHH
Q 017180 106 EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR--PKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLT 183 (376)
Q Consensus 106 ~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia 183 (376)
..|..+++.|.+. ||. -.|+.|...-=+ +......+.+-..|..+|+..-... ..++++|+||||||.++
T Consensus 156 ~vw~kLIe~L~~i----GY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~ 227 (642)
T PLN02517 156 FVWAVLIANLARI----GYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYF 227 (642)
T ss_pred eeHHHHHHHHHHc----CCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHH
Confidence 3678999999986 775 334433322110 1111122445555666655431000 26899999999999999
Q ss_pred HHHHHhC-----------C----CCcceEEEeccCCCC
Q 017180 184 VRAAKKN-----------L----VKPTAIAAVAPTWAG 206 (376)
Q Consensus 184 ~~~a~~~-----------p----~~v~~lvl~~p~~~~ 206 (376)
+.+...- + ..|++.|.+++.+.+
T Consensus 228 lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 228 LHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 9876521 1 247889999887644
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.13 Score=48.98 Aligned_cols=106 Identities=16% Similarity=0.105 Sum_probs=72.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC--------CCCCCCHHHHHHHHHHHHhCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR--------PKMDYNADVMEKFVVDLINAPD 161 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~--------~~~~~~~~~~~~~l~~~l~~l~ 161 (376)
+|.+|.--|.-+.+..-.|....-.|.++ |+---+.--||=|+=.. -....|+.++.+....++++--
T Consensus 448 ~p~lLygYGaYG~s~~p~Fs~~~lSLlDR----GfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~ 523 (682)
T COG1770 448 APLLLYGYGAYGISMDPSFSIARLSLLDR----GFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGY 523 (682)
T ss_pred CcEEEEEeccccccCCcCcccceeeeecC----ceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCc
Confidence 55555555533222233444444455555 77666666777665321 1246788888888888877643
Q ss_pred CCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 162 SPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 162 ~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
...+.++++|.|.||++.-..+.+.|+.++++|+-.|+
T Consensus 524 ----~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPF 561 (682)
T COG1770 524 ----TSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPF 561 (682)
T ss_pred ----CCccceEEeccCchhHHHHHHHhhChhhhhheeecCCc
Confidence 13457999999999999999999999999999998884
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.065 Score=43.36 Aligned_cols=104 Identities=13% Similarity=0.136 Sum_probs=60.1
Q ss_pred CCcEEEecCCCCCccchHhHH-H-----------HHHHHhhhCCcceEEEEeCCC---CCcCCC-CCC-CCCCHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRL-V-----------AQDIVQRVGKVNWRATIVDWP---GLGYSD-RPK-MDYNADVMEKF 152 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~-~-----------~~~L~~~~~~~~~~Vi~~D~~---G~G~S~-~~~-~~~~~~~~~~~ 152 (376)
...+|||||.|.+ -..+|.+ + ++.+.+ ..+.||.|++..-- -+-.+. .|. ...+..+.+.-
T Consensus 101 ~kLlVLIHGSGvV-rAGQWARrLIIN~~Ld~GTQiPyi~r-Av~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 101 QKLLVLIHGSGVV-RAGQWARRLIINEDLDSGTQIPYIKR-AVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred cceEEEEecCceE-ecchHhhhhhhccccccCCcChHHHH-HHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 4579999998733 2345532 1 122211 11229999998653 122222 222 12244444443
Q ss_pred HH-HHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCC--cceEEEec
Q 017180 153 VV-DLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVK--PTAIAAVA 201 (376)
Q Consensus 153 l~-~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~--v~~lvl~~ 201 (376)
+. .++.-.. ...+.+|.||.||...+.+..+.|+. |.++.+.+
T Consensus 179 vw~~~v~pa~------~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTD 224 (297)
T KOG3967|consen 179 VWKNIVLPAK------AESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTD 224 (297)
T ss_pred HHHHHhcccC------cceEEEEEeccCChhHHHHHHhcCCccceEEEEeec
Confidence 33 4444443 67899999999999999999988754 55555544
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.013 Score=42.88 Aligned_cols=39 Identities=13% Similarity=0.271 Sum_probs=22.9
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHH
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVA 112 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~ 112 (376)
..+|++||+...-+..++ ..||||+|||+ ++-..|..++
T Consensus 74 ~I~g~~iHFih~rs~~~~-aiPLll~HGWP--gSf~Ef~~vI 112 (112)
T PF06441_consen 74 EIDGLDIHFIHVRSKRPN-AIPLLLLHGWP--GSFLEFLKVI 112 (112)
T ss_dssp EETTEEEEEEEE--S-TT--EEEEEE--SS----GGGGHHHH
T ss_pred EEeeEEEEEEEeeCCCCC-CeEEEEECCCC--ccHHhHHhhC
Confidence 345999998765543321 57899999999 9888887653
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.015 Score=49.19 Aligned_cols=35 Identities=14% Similarity=0.088 Sum_probs=25.4
Q ss_pred CCcEEEEecchHHHHHHHHHHhC-----CCCcceEEEecc
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKN-----LVKPTAIAAVAP 202 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~p 202 (376)
..++++.|||+||.+|..++... +..+..+..-+|
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P 166 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQP 166 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCC
Confidence 67899999999999999988842 334554444444
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.018 Score=51.14 Aligned_cols=89 Identities=11% Similarity=0.001 Sum_probs=65.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
...-||+-|=| +....=+.+...|.++ |+.|+.+|-.=|=.|+ .+.++.++|+..+++....++ ...
T Consensus 260 d~~av~~SGDG--GWr~lDk~v~~~l~~~----gvpVvGvdsLRYfW~~-----rtPe~~a~Dl~r~i~~y~~~w--~~~ 326 (456)
T COG3946 260 DTVAVFYSGDG--GWRDLDKEVAEALQKQ----GVPVVGVDSLRYFWSE-----RTPEQIAADLSRLIRFYARRW--GAK 326 (456)
T ss_pred ceEEEEEecCC--chhhhhHHHHHHHHHC----CCceeeeehhhhhhcc-----CCHHHHHHHHHHHHHHHHHhh--Ccc
Confidence 34557777766 6555556777888876 9999999955454554 457889999999988776443 367
Q ss_pred cEEEEecchHHHHHHHHHHhCC
Q 017180 170 DLVIFGGGHAATLTVRAAKKNL 191 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p 191 (376)
+++|+|+|+|+-+.-....+-|
T Consensus 327 ~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 327 RVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred eEEEEeecccchhhHHHHHhCC
Confidence 8999999999988766555433
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.017 Score=50.94 Aligned_cols=34 Identities=12% Similarity=0.028 Sum_probs=31.5
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.-.++||||||.=|+.+|.++|+++..+...+|.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~ 186 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGI 186 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceecccccc
Confidence 6789999999999999999999999999988874
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.025 Score=51.25 Aligned_cols=19 Identities=32% Similarity=0.340 Sum_probs=17.6
Q ss_pred cEEEEecchHHHHHHHHHH
Q 017180 170 DLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~ 188 (376)
++++.|||+||.+|+.+|.
T Consensus 229 sI~vTGHSLGGALAtLaA~ 247 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAF 247 (414)
T ss_pred eEEEEecCHHHHHHHHHHH
Confidence 4999999999999999986
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.034 Score=46.59 Aligned_cols=46 Identities=9% Similarity=0.104 Sum_probs=33.8
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhC----CCCcceEEEecc
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN----LVKPTAIAAVAP 202 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~----p~~v~~lvl~~p 202 (376)
.+-+..+++.. ..++++.|||.||.+|..+|... .++|.++...++
T Consensus 72 ~~yl~~~~~~~-------~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 72 LAYLKKIAKKY-------PGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHhC-------CCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence 34455566655 34699999999999999998863 356778877665
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.029 Score=45.89 Aligned_cols=63 Identities=6% Similarity=0.012 Sum_probs=46.6
Q ss_pred ceEEEEeCCCCCcCCC-C----C----CCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhC
Q 017180 123 NWRATIVDWPGLGYSD-R----P----KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN 190 (376)
Q Consensus 123 ~~~Vi~~D~~G~G~S~-~----~----~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~ 190 (376)
-.+|++|=||--.... . . .......+..+....+|++.+ .+++++|+|||-|+.++.++..+.
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-----~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-----NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-----CCCCEEEEEeChHHHHHHHHHHHH
Confidence 5899999888654322 1 1 123455666667778888886 578999999999999999998853
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.053 Score=43.39 Aligned_cols=57 Identities=12% Similarity=0.173 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 146 ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 146 ~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.+.-+.+|..|++.+.... .....+.++|||+|+.++-..+...+..++.+|++..+
T Consensus 87 A~~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 4566778888888876222 23457999999999999999888867789999998654
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.033 Score=50.56 Aligned_cols=39 Identities=23% Similarity=0.200 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
+++.+++..+++.... ...++++.||||||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~----e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKD----EEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCc----ccccEEEeccchHHHHHHHHHHH
Confidence 4455666666766530 12368999999999999998874
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.11 Score=40.53 Aligned_cols=35 Identities=11% Similarity=0.027 Sum_probs=31.4
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
..+.++-|.||||..|+.+.-++|+...++|.+++
T Consensus 100 pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSG 134 (227)
T COG4947 100 PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSG 134 (227)
T ss_pred CCCccccccchhhhhhhhhheeChhHhhhheeecc
Confidence 45567789999999999999999999999999887
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.02 E-value=1.2 Score=39.80 Aligned_cols=62 Identities=13% Similarity=0.153 Sum_probs=49.4
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHh----cccCCceEEEeCCC-CCCCC-CChHHHHHHHHHHHHhhcC
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALK----GAKGVTKFVEVPGA-LLPQE-EYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~~~~~-H~~~~-e~pe~~~~~i~~fl~~~~~ 373 (376)
..+.+.+.++.|.+++.+..+++. +..-+++-+-+.++ |..+. ..|..+.+...+|+.+...
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhccc
Confidence 468899999999999998888873 23345666777788 99766 4699999999999998654
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.04 Score=50.49 Aligned_cols=36 Identities=8% Similarity=0.146 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
....+.+.+++++.. ..++++.|||+||++|..+|.
T Consensus 262 ~~I~~~L~~lL~k~p------~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 262 YTIRQMLRDKLARNK------NLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHhCC------CceEEEEecChHHHHHHHHHH
Confidence 344556666666653 678999999999999999765
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.061 Score=49.47 Aligned_cols=35 Identities=9% Similarity=0.246 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 148 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
+..+.+.++++... ..++++.|||+||++|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p------~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNP------TSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCC------CCeEEEEecCHHHHHHHHHHH
Confidence 45566777777653 678999999999999999885
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.059 Score=48.21 Aligned_cols=37 Identities=19% Similarity=0.211 Sum_probs=26.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
..+.|..+++.... ...++++.|||+||.+|..+|..
T Consensus 184 Vl~eI~~ll~~y~~----~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 184 VREEIARLLQSYGD----EPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHhcCC----CCceEEEeccchHHHHHHHHHHH
Confidence 44555666666530 12369999999999999998873
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.075 Score=49.27 Aligned_cols=35 Identities=11% Similarity=0.232 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 148 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
...+.+.+++++.. ..++++.|||+||++|..+|.
T Consensus 306 ~v~~~lk~ll~~~p------~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHK------NAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCC------CCeEEEeccccHHHHHHHHHH
Confidence 45556667777653 678999999999999999875
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.067 Score=47.86 Aligned_cols=89 Identities=7% Similarity=0.066 Sum_probs=51.4
Q ss_pred CCcEEEecCCCCCc-cchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVS-TVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~-~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+--+|+.||+- + +...|...+......-. +..++..+..|.=.........--+..++++.+.+.... .
T Consensus 80 ~HLvVlthGi~--~~~~~~~~~~~~~~~kk~p--~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~s------i 149 (405)
T KOG4372|consen 80 KHLVVLTHGLH--GADMEYWKEKIEQMTKKMP--DKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYS------I 149 (405)
T ss_pred ceEEEeccccc--cccHHHHHHHHHhhhcCCC--cceEeeeccccchhhccccceeeecccHHHHhhhhhccc------c
Confidence 45788999988 5 67888888888777311 333333333322111111122222334444444444432 5
Q ss_pred CcEEEEecchHHHHHHHHHH
Q 017180 169 SDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~ 188 (376)
.++-.||||+||.++..+..
T Consensus 150 ~kISfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 150 EKISFVGHSLGGLVARYAIG 169 (405)
T ss_pred ceeeeeeeecCCeeeeEEEE
Confidence 78999999999988765433
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.046 Score=49.04 Aligned_cols=103 Identities=14% Similarity=0.034 Sum_probs=77.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC---CCCCHHHHHHHHHHHHhCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK---MDYNADVMEKFVVDLINAPDSPVSS 166 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~ 166 (376)
.|+|+..-|++ .+..-.+. .+.+.+ +-+-+.+.+|-||.|.+.+ ...++++-+.|...+++++..-+
T Consensus 63 rPtV~~T~GY~--~~~~p~r~---Ept~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY-- 132 (448)
T PF05576_consen 63 RPTVLYTEGYN--VSTSPRRS---EPTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIY-- 132 (448)
T ss_pred CCeEEEecCcc--cccCcccc---chhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhc--
Confidence 67888889998 54332322 233321 3678899999999998433 36789999999999888876333
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCCCCcceEEE-eccC
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAA-VAPT 203 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl-~~p~ 203 (376)
.++++--|.|=||+.++.+=.-+|+.|++.|. ++|.
T Consensus 133 -~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 133 -PGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred -cCCceecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 67888899999999999998889999999875 4553
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.081 Score=47.93 Aligned_cols=40 Identities=20% Similarity=0.193 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
++..+.+..+++..... ....++++.|||+||.+|+..|.
T Consensus 189 ~qVl~eV~~L~~~y~~~--~e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGK--GEEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred HHHHHHHHHHHHhhccc--CCcceEEEEcccHHHHHHHHHHH
Confidence 34455566666654210 02357999999999999999886
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.072 Score=48.32 Aligned_cols=37 Identities=16% Similarity=0.206 Sum_probs=26.0
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
..+.|..+++... ....++++.|||+||.+|+..|..
T Consensus 199 Vl~eV~~L~~~Yp----~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYK----NEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCC----CCCceEEEecCcHHHHHHHHHHHH
Confidence 4445556666553 012469999999999999998863
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.69 E-value=0.11 Score=48.27 Aligned_cols=38 Identities=18% Similarity=0.187 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 148 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
+..+.+..+++... ....++++.|||+||.+|..+|..
T Consensus 313 qVl~eV~~Ll~~Y~----~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYK----GEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCC----CCcceEEEeccchHHHHHHHHHHH
Confidence 34455666666553 012468999999999999998873
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.12 Score=48.07 Aligned_cols=39 Identities=23% Similarity=0.179 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 148 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
+..++|..+++..... ....+++|.|||+||.+|+..|.
T Consensus 299 QVl~eV~rLv~~Yk~~--ge~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 299 QVMEEVKRLVNFFKDR--GEEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred HHHHHHHHHHHhcccc--CCcceEEEeccCHHHHHHHHHHH
Confidence 3445666777655310 02357999999999999999886
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.16 E-value=0.54 Score=48.05 Aligned_cols=93 Identities=12% Similarity=0.204 Sum_probs=64.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+|++.|+|-.- +...... .|+++ ...|-||.-. +.....++++.++-...-+++++ +.
T Consensus 2123 ~~~~Ffv~pIE--G~tt~l~----~la~r----------le~PaYglQ~T~~vP~dSies~A~~yirqirkvQ-----P~ 2181 (2376)
T KOG1202|consen 2123 EPPLFFVHPIE--GFTTALE----SLASR----------LEIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQ-----PE 2181 (2376)
T ss_pred CCceEEEeccc--cchHHHH----HHHhh----------cCCcchhhhccccCCcchHHHHHHHHHHHHHhcC-----CC
Confidence 78899999987 5544443 44442 2235566432 33345677888887777778876 67
Q ss_pred CcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccC
Q 017180 169 SDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPT 203 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~ 203 (376)
.|..++|+|+|+.++..+|.. ..+....+|++++.
T Consensus 2182 GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2182 GPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred CCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 899999999999999998872 23345568888763
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.14 E-value=0.15 Score=47.58 Aligned_cols=39 Identities=15% Similarity=0.210 Sum_probs=25.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
..+.|..+++..... .....++++.|||+||.+|+..|.
T Consensus 293 Vl~eVkrLl~~Y~~e-~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 293 ILTEVKRLVEEHGDD-DDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHcccc-cCCCceEEEEccCHHHHHHHHHHH
Confidence 344455566554310 001458999999999999999986
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=93.05 E-value=0.11 Score=48.36 Aligned_cols=41 Identities=17% Similarity=0.137 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 148 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
+..+.|..+++...........++++.|||+||.+|...|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 34445555655542000012357999999999999999886
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=92.87 E-value=0.16 Score=41.02 Aligned_cols=87 Identities=14% Similarity=0.103 Sum_probs=44.7
Q ss_pred HHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh--
Q 017180 112 AQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK-- 189 (376)
Q Consensus 112 ~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~-- 189 (376)
.+.+.+..+.....+..++||--.... ....+...-++++...++....+ =+..+++|+|+|.|+.++..++..
T Consensus 28 ~~~l~~~~g~~~~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~--CP~~kivl~GYSQGA~V~~~~~~~~~ 103 (179)
T PF01083_consen 28 ADALQAQPGGTSVAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAAR--CPNTKIVLAGYSQGAMVVGDALSGDG 103 (179)
T ss_dssp HHHHHHHCTTCEEEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHH--STTSEEEEEEETHHHHHHHHHHHHTT
T ss_pred HHHHHhhcCCCeeEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHh--CCCCCEEEEecccccHHHHHHHHhcc
Confidence 344444322224777778877543221 11112233333344433322100 036789999999999999998776
Q ss_pred ----CCCCcceEEEecc
Q 017180 190 ----NLVKPTAIAAVAP 202 (376)
Q Consensus 190 ----~p~~v~~lvl~~p 202 (376)
..++|.+++++.-
T Consensus 104 l~~~~~~~I~avvlfGd 120 (179)
T PF01083_consen 104 LPPDVADRIAAVVLFGD 120 (179)
T ss_dssp SSHHHHHHEEEEEEES-
T ss_pred CChhhhhhEEEEEEecC
Confidence 2356788888753
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.77 E-value=0.18 Score=46.97 Aligned_cols=39 Identities=18% Similarity=0.171 Sum_probs=25.5
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
..+.|..+++..... .....++++.|||+||.+|...|.
T Consensus 279 Vl~eV~rL~~~Ypd~-~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 279 VLTEVKRLVERYGDE-EGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHCCcc-cCCcceEEEecCcHHHHHHHHHHH
Confidence 444455555544200 002357999999999999999886
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.10 E-value=0.24 Score=44.43 Aligned_cols=36 Identities=17% Similarity=0.111 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
+.+.+++..+++... .-++.+-|||+||.+|..+|.
T Consensus 155 ~~~~~~~~~L~~~~~------~~~i~vTGHSLGgAlA~laa~ 190 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP------NYSIWVTGHSLGGALASLAAL 190 (336)
T ss_pred HHHHHHHHHHHHhcC------CcEEEEecCChHHHHHHHHHH
Confidence 567778888888875 778999999999999999887
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.71 E-value=0.3 Score=46.31 Aligned_cols=21 Identities=10% Similarity=0.061 Sum_probs=19.1
Q ss_pred CCcEEEEecchHHHHHHHHHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
.-+++++|||+||.+|..++.
T Consensus 250 dYkLVITGHSLGGGVAALLAi 270 (633)
T PLN02847 250 DFKIKIVGHSLGGGTAALLTY 270 (633)
T ss_pred CCeEEEeccChHHHHHHHHHH
Confidence 568999999999999999877
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=91.47 E-value=8.7 Score=33.24 Aligned_cols=110 Identities=12% Similarity=0.230 Sum_probs=69.7
Q ss_pred ecccCCCCCCCcEEEecCCCCCcc-chHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhC
Q 017180 81 KHERESPDPSKNILMIPTISDVST-VEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA 159 (376)
Q Consensus 81 ~~g~~~~~~~~~vvllHG~~~~~~-~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~ 159 (376)
..+.....+.|.||++--.. ++ ....+...+.|-. ...|++-|+-.--.-.-....+.++++.+-+.+++..
T Consensus 94 r~~~~~r~pdPkvLivapms--GH~aTLLR~TV~alLp-----~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~ 166 (415)
T COG4553 94 RDMPDARKPDPKVLIVAPMS--GHYATLLRGTVEALLP-----YHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINF 166 (415)
T ss_pred hccccccCCCCeEEEEeccc--ccHHHHHHHHHHHhcc-----ccceeEeeccccceeecccCCccHHHHHHHHHHHHHH
Confidence 33333333356677665555 33 3344555666666 6889999986543333233578899999999999999
Q ss_pred CCCCCCCCCCcEEEEecc-----hHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 160 PDSPVSSSESDLVIFGGG-----HAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 160 l~~~~~~~~~~~~lvG~S-----~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
+| .. +++++.. .=+.+++..+...|.....++++.+..
T Consensus 167 ~G-----p~--~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPI 209 (415)
T COG4553 167 LG-----PD--AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPI 209 (415)
T ss_pred hC-----CC--CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcc
Confidence 97 22 4444433 344555555556787888999987643
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=91.35 E-value=0.43 Score=30.88 Aligned_cols=19 Identities=11% Similarity=0.445 Sum_probs=10.7
Q ss_pred CCCCcEEEecCCCCCccchHh
Q 017180 88 DPSKNILMIPTISDVSTVEEW 108 (376)
Q Consensus 88 ~~~~~vvllHG~~~~~~~~~~ 108 (376)
..+|+|+|.||+. +++..|
T Consensus 41 ~~k~pVll~HGL~--~ss~~w 59 (63)
T PF04083_consen 41 KKKPPVLLQHGLL--QSSDDW 59 (63)
T ss_dssp TT--EEEEE--TT----GGGG
T ss_pred CCCCcEEEECCcc--cChHHH
Confidence 3378899999999 988888
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.18 E-value=0.61 Score=45.13 Aligned_cols=106 Identities=7% Similarity=-0.060 Sum_probs=60.0
Q ss_pred CCcEEEecCCCCCccc-hHh--HHHHHHHHhhhCCcceEEEEeCCC----CCcCC--CCCCCCCCHHHHHHHHHHH---H
Q 017180 90 SKNILMIPTISDVSTV-EEW--RLVAQDIVQRVGKVNWRATIVDWP----GLGYS--DRPKMDYNADVMEKFVVDL---I 157 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~-~~~--~~~~~~L~~~~~~~~~~Vi~~D~~----G~G~S--~~~~~~~~~~~~~~~l~~~---l 157 (376)
-|++|+|||.+..... ..+ ......+..+ +.=|+.+.+| |+.-. +.....+.+.++...+..+ |
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~----~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I 187 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLK----DVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNI 187 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccC----CEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHH
Confidence 4789999997733222 122 1122222222 4556666666 22211 1223456666666555543 4
Q ss_pred hCCCCCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccC
Q 017180 158 NAPDSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPT 203 (376)
Q Consensus 158 ~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~ 203 (376)
...+ +...+|.|+|||.||..+..+... ....+.+.|..++.
T Consensus 188 ~~FG----Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 188 PSFG----GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred HhcC----CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 4444 346789999999999999887662 12356666766653
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=90.69 E-value=2.1 Score=33.24 Aligned_cols=78 Identities=10% Similarity=0.100 Sum_probs=51.2
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcce-EEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNW-RATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~-~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
-.||++-||+ .....+..++ +.+ ++ -++++|+...- .+..... -+
T Consensus 12 ~LIvyFaGwg--tpps~v~HLi--lpe-----N~dl~lcYDY~dl~------ldfDfsA-------------------y~ 57 (214)
T COG2830 12 HLIVYFAGWG--TPPSAVNHLI--LPE-----NHDLLLCYDYQDLN------LDFDFSA-------------------YR 57 (214)
T ss_pred EEEEEEecCC--CCHHHHhhcc--CCC-----CCcEEEEeehhhcC------cccchhh-------------------hh
Confidence 3688889999 8777665542 333 44 46678887442 1222211 23
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
.+.||.+|||-.+|-++.+.. ++++.+.+++++
T Consensus 58 hirlvAwSMGVwvAeR~lqg~--~lksatAiNGTg 90 (214)
T COG2830 58 HIRLVAWSMGVWVAERVLQGI--RLKSATAINGTG 90 (214)
T ss_pred hhhhhhhhHHHHHHHHHHhhc--cccceeeecCCC
Confidence 467899999999999987754 456777887754
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=89.95 E-value=1.4 Score=37.03 Aligned_cols=63 Identities=17% Similarity=0.269 Sum_probs=42.7
Q ss_pred ceEEEEeCCCCC--cCC--CCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 123 NWRATIVDWPGL--GYS--DRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 123 ~~~Vi~~D~~G~--G~S--~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
|+++..+++|.. ..+ .......+.++-++.|.+.++.... ..++++++|+|.|+.++...+.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~----~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA----AGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc----CCCCEEEEEECHHHHHHHHHHHH
Confidence 678888888871 111 1123455666666677766665321 36889999999999999987763
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=88.24 E-value=1 Score=40.21 Aligned_cols=35 Identities=9% Similarity=0.062 Sum_probs=27.1
Q ss_pred CCcEEEEecchHHHHHHHHHHhC-----CCCcceEEEecc
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKN-----LVKPTAIAAVAP 202 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~p 202 (376)
.+|+.|||||+|+.+.......- -..|+.++++..
T Consensus 219 ~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Ga 258 (345)
T PF05277_consen 219 ERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGA 258 (345)
T ss_pred CCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecC
Confidence 67999999999999988776632 234788888864
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=88.16 E-value=1.5 Score=39.18 Aligned_cols=58 Identities=9% Similarity=0.021 Sum_probs=43.5
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhccc------------------------CC-ceEEEeCCC-CCCCCCChHHHHHHHH
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAK------------------------GV-TKFVEVPGA-LLPQEEYPAMVAQELY 365 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~~~~~-H~~~~e~pe~~~~~i~ 365 (376)
.++|||..|+.|.+|+.-..+.+.+.+ .+ .+++.+.++ |++. .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 469999999999888764444432111 23 677788888 9986 59999999999
Q ss_pred HHHHh
Q 017180 366 QFLQQ 370 (376)
Q Consensus 366 ~fl~~ 370 (376)
.||..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99965
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=87.17 E-value=1.8 Score=38.65 Aligned_cols=76 Identities=14% Similarity=0.161 Sum_probs=47.2
Q ss_pred eEEEEeCCC-CCcCCCCCC-CCCCH-HHHHHHHHH----HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh----C--
Q 017180 124 WRATIVDWP-GLGYSDRPK-MDYNA-DVMEKFVVD----LINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK----N-- 190 (376)
Q Consensus 124 ~~Vi~~D~~-G~G~S~~~~-~~~~~-~~~~~~l~~----~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~----~-- 190 (376)
.+|+-+|.| |-|.|-... ..++. +..++|+.. |.+... .....+++|.|-|.||..+-.+|.. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p---~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHP---QYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCc---ccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 478999998 888885221 12221 223344444 444332 1136789999999999988777762 1
Q ss_pred ----CCCcceEEEecc
Q 017180 191 ----LVKPTAIAAVAP 202 (376)
Q Consensus 191 ----p~~v~~lvl~~p 202 (376)
+-.++++++-+|
T Consensus 79 ~~~~~inLkGi~IGNg 94 (319)
T PLN02213 79 CCEPPINLQGYMLGNP 94 (319)
T ss_pred ccCCceeeeEEEeCCC
Confidence 235677777775
|
|
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.67 E-value=2.8 Score=39.69 Aligned_cols=101 Identities=14% Similarity=0.045 Sum_probs=58.4
Q ss_pred cEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhC---CCCCCCCC
Q 017180 92 NILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA---PDSPVSSS 167 (376)
Q Consensus 92 ~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~---l~~~~~~~ 167 (376)
.|+-+||.|.+ .++..........++.+ ++.|+.+||-=--+.. .+...++.--...++|+. +| ..
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEaP---FPRaleEv~fAYcW~inn~allG----~T 467 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEAP---FPRALEEVFFAYCWAINNCALLG----ST 467 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCCC---CCcHHHHHHHHHHHHhcCHHHhC----cc
Confidence 45666998855 23333444445555542 7999999984332221 223334333333344432 33 23
Q ss_pred CCcEEEEecchHHHHHHHHHH----hCCCCcceEEEecc
Q 017180 168 ESDLVIFGGGHAATLTVRAAK----KNLVKPTAIAAVAP 202 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~----~~p~~v~~lvl~~p 202 (376)
+++++++|-|.||.+.+-.|. .+--..+++++.-+
T Consensus 468 gEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ 506 (880)
T KOG4388|consen 468 GERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYP 506 (880)
T ss_pred cceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecC
Confidence 688999999999986655544 33334578888744
|
|
| >PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function | Back alignment and domain information |
|---|
Probab=86.22 E-value=4.1 Score=29.20 Aligned_cols=85 Identities=11% Similarity=0.074 Sum_probs=55.8
Q ss_pred chHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCH-HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHH--
Q 017180 105 VEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNA-DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAAT-- 181 (376)
Q Consensus 105 ~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~-~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~-- 181 (376)
+..|..+.+.+... |+..=.+.++.+|.+-..-..... +--.+.|..+++..- ..++++||-|--.-
T Consensus 10 wnly~~l~~Fl~~~----~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP------~~kfiLIGDsgq~Dpe 79 (100)
T PF09949_consen 10 WNLYPFLRDFLRRN----GFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFP------ERKFILIGDSGQHDPE 79 (100)
T ss_pred HHHHHHHHHHHHhc----CCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCC------CCcEEEEeeCCCcCHH
Confidence 44555566666664 688778888888766422111112 344566788888874 78999999775543
Q ss_pred HHHHHHHhCCCCcceEEE
Q 017180 182 LTVRAAKKNLVKPTAIAA 199 (376)
Q Consensus 182 ia~~~a~~~p~~v~~lvl 199 (376)
+-..+|.++|++|.++.+
T Consensus 80 iY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 80 IYAEIARRFPGRILAIYI 97 (100)
T ss_pred HHHHHHHHCCCCEEEEEE
Confidence 333467799999988754
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=85.63 E-value=2.4 Score=40.15 Aligned_cols=85 Identities=18% Similarity=0.100 Sum_probs=56.3
Q ss_pred HHHHHHhhhCCcceEEEEeCCCCCcCCCC---CCCCCCH-----------HHHHHHHHHHHhCCCCCCCCCCCcEEEEec
Q 017180 111 VAQDIVQRVGKVNWRATIVDWPGLGYSDR---PKMDYNA-----------DVMEKFVVDLINAPDSPVSSSESDLVIFGG 176 (376)
Q Consensus 111 ~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~---~~~~~~~-----------~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~ 176 (376)
+...+.+ ||-++.=|- ||..+.. ....... ..++..-.++++..-. ...+.-+..|.
T Consensus 52 ~~~~~~~-----G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg---~~p~~sY~~Gc 122 (474)
T PF07519_consen 52 MATALAR-----GYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYG---KAPKYSYFSGC 122 (474)
T ss_pred cchhhhc-----CeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhC---CCCCceEEEEe
Confidence 4556776 999999996 4544421 1111222 2222222344444321 12566888999
Q ss_pred chHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 177 GHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 177 S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
|-||.-++..|+++|+..++++.-+|.+
T Consensus 123 S~GGRqgl~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 123 STGGRQGLMAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred CCCcchHHHHHHhChhhcCeEEeCCchH
Confidence 9999999999999999999999999864
|
It also includes several bacterial homologues of unknown function. |
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=83.21 E-value=1.3 Score=41.87 Aligned_cols=22 Identities=14% Similarity=0.196 Sum_probs=18.3
Q ss_pred CCCcEEEEecchHHHHHHHHHH
Q 017180 167 SESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
.+++++.+||||||.++-.+..
T Consensus 524 ~~RPivwI~HSmGGLl~K~lLl 545 (697)
T KOG2029|consen 524 DDRPIVWIGHSMGGLLAKKLLL 545 (697)
T ss_pred CCCceEEEecccchHHHHHHHH
Confidence 4788999999999988876654
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=82.48 E-value=44 Score=31.44 Aligned_cols=99 Identities=12% Similarity=0.027 Sum_probs=59.2
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|..|++-|+-....-+.+ ..+..|.. =-.+.=|.|=-|.+=-- ...+ -+...+.|.+-++.|+ ...
T Consensus 289 PPL~VYFSGyR~aEGFEgy-~MMk~Lg~------PfLL~~DpRleGGaFYlGs~ey-E~~I~~~I~~~L~~Lg----F~~ 356 (511)
T TIGR03712 289 PPLNVYFSGYRPAEGFEGY-FMMKRLGA------PFLLIGDPRLEGGAFYLGSDEY-EQGIINVIQEKLDYLG----FDH 356 (511)
T ss_pred CCeEEeeccCcccCcchhH-HHHHhcCC------CeEEeeccccccceeeeCcHHH-HHHHHHHHHHHHHHhC----CCH
Confidence 3456899998732222222 22333322 23445577766655211 1112 2345556667778887 345
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
..++|-|-|||..=|+.++++- ...++|+.-|
T Consensus 357 ~qLILSGlSMGTfgAlYYga~l--~P~AIiVgKP 388 (511)
T TIGR03712 357 DQLILSGLSMGTFGALYYGAKL--SPHAIIVGKP 388 (511)
T ss_pred HHeeeccccccchhhhhhcccC--CCceEEEcCc
Confidence 6799999999999999999863 3446776666
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.38 E-value=3.1 Score=35.67 Aligned_cols=34 Identities=9% Similarity=0.105 Sum_probs=25.7
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
+..++.|-|||+||.+|..+..++. +-.+..-+|
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 4678999999999999999887652 334555555
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=82.38 E-value=3.1 Score=35.67 Aligned_cols=34 Identities=9% Similarity=0.105 Sum_probs=25.7
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
+..++.|-|||+||.+|..+..++. +-.+..-+|
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 4678999999999999999887652 334555555
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 2e-12
Identities = 47/335 (14%), Positives = 100/335 (29%), Gaps = 75/335 (22%)
Query: 59 TPSKTGNWQWKF-KENSINIYYEKHERESPDPSKNILMI----PTISDVSTVEEWRLVAQ 113
+ + +F + Y E P +++I + WR V
Sbjct: 9 SEKSERAYVERFVNAGGVETRY--LEAGKGQP---VILIHGGGA---GAESEGNWRNVIP 60
Query: 114 DIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA--PDSPVSSSESDL 171
+ + +R +D G G + +P ++Y D + + D I A D VS
Sbjct: 61 ILARH-----YRVIAMDMLGFGKTAKPDIEYTQDRRIRHLHDFIKAMNFDGKVS------ 109
Query: 172 VI---FGGGHAATLTVRAAK--KNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLR 226
++ GG ++V ++ LV A + L + D + E +
Sbjct: 110 IVGNSMGGATGLGVSVLHSELVNALV-LMGSAGLVVEIHEDLRPIINYDFTREG----MV 164
Query: 227 GTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPA 286
++A + ++ + ++ SRY + R
Sbjct: 165 HLVKA-------------------------LTNDGFKIDDAMINSRYTYATDEATR---K 196
Query: 287 AFLTGLLDPVNSREEFLQLFADLEG-KLPLLVVSTEG----SPRRSKAEMEALKGAKGVT 341
A++ + F + ++P LVV + + ++ + +
Sbjct: 197 AYVATMQWIREQGGLFY-DPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDS---- 251
Query: 342 KFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFEPS 375
+P E+P A FL + +
Sbjct: 252 WGYIIPHCGHWAMIEHPEDFANATLSFLSLRVDIT 286
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 2e-11
Identities = 49/296 (16%), Positives = 86/296 (29%), Gaps = 76/296 (25%)
Query: 101 DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINA 159
VS WRL + + +R D G G++DRP+ +Y+ D ++ +++A
Sbjct: 37 GVSAYANWRLTIPALSKF-----YRVIAPDMVGFGFTDRPENYNYSKDSWVDHIIGIMDA 91
Query: 160 PDSPVSSSESDLVI---------FGGGHAATLTV----RAAKKNLVKPTAIAAVAPTWAG 206
L I FGGG A + R + L+ A
Sbjct: 92 -----------LEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGA---AGTRFDVTE 137
Query: 207 PLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTP 266
L V+G S+E +R L + VT
Sbjct: 138 GLNAVWGYTPSIEN----MRNLLDI-------------------------FAYDRSLVTD 168
Query: 267 GIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKL--PLLVVSTE--- 321
+ RY + + G + +F + +P + L + L L++
Sbjct: 169 ELARLRYEASIQPGFQ---ESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQ 225
Query: 322 -GSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFEPS 375
S E + A + Q E + + +F + P
Sbjct: 226 VVPLSSSLRLGELIDRA----QLHVFGRCGHWTQIEQTDRFNRLVVEFFNEANTPK 277
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 5e-10
Identities = 36/281 (12%), Positives = 79/281 (28%), Gaps = 46/281 (16%)
Query: 100 SDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMD-YNADVMEKFVVDLIN 158
++ + + + + VD PG G+SD+ + L +
Sbjct: 47 PGAASWTNFSRNIAVLARH-----FHVLAVDQPGYGHSDKRAEHGQFNRYAAMALKGLFD 101
Query: 159 APDSPVSSSESDLVI--FGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDS 216
+ LV GGG A + + + P G +F D
Sbjct: 102 Q----LGLGRVPLVGNALGGGTAVRFALDYPA--RAG--RLVLMGP--GGLSINLFAPDP 151
Query: 217 SMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALT 276
+ + L AP + + + + + +TP +V+ R+AL
Sbjct: 152 TEGVK--RLSKFSVAPTRENLEAFL-------------RVMVYDKNLITPELVDQRFALA 196
Query: 277 KRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEG-KLPLLVVSTE----GSPRRSKAEM 331
+ A + E ++ ++ + P+L++ + +
Sbjct: 197 STPESL---TATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVAL 253
Query: 332 EALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371
+ + A + Q E + +FL
Sbjct: 254 KTIPRA----QLHVFGQCGHWVQVEKFDEFNKLTIEFLGGG 290
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 1e-07
Identities = 37/317 (11%), Positives = 92/317 (29%), Gaps = 70/317 (22%)
Query: 73 NSINIYYEKHERESPDPSKNILMI---PTISDVSTVEEWRLVAQDIVQRVGKVNWRATIV 129
++ I++ + + ++++ + + +V+ +R ++
Sbjct: 23 KTLRIHF----NDCGQGDETVVLLHGSG--PGATGWANFSRNIDPLVEA----GYRVILL 72
Query: 130 DWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLVI---------FGGGHA 179
D PG G SD +D+ + + +++ L I GG +
Sbjct: 73 DCPGWGKSDSVVNSGSRSDLNARILKSVVDQ-----------LDIAKIHLLGNSMGGHSS 121
Query: 180 ATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMY 239
T++ P + + G L + G+ +
Sbjct: 122 VAFTLKW-------PERVGKLVLMGGGTG-------------GMSLFTPMPTEGIKRLNQ 161
Query: 240 NMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRY-ALTKRKGARYVPAAFLTGLLDPVNS 298
+ ++ V+ + ++T + E+R + R+ F+ L
Sbjct: 162 LYRQPTIENLKLMMDIFVF-DTSDLTDALFEARLNNMLSRRDHL---ENFVKSLEANPKQ 217
Query: 299 REEFLQLFADLEGKLPLLVVSTEG----SPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQ 353
+F A++ K L+V + + G++ Q
Sbjct: 218 FPDFGPRLAEI--KAQTLIVWGRNDRFVPMDAGLRLLSGIAGSE----LHIFRDCGHWAQ 271
Query: 354 EEYPAMVAQELYQFLQQ 370
E+ Q + FL +
Sbjct: 272 WEHADAFNQLVLNFLAR 288
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 2e-07
Identities = 35/281 (12%), Positives = 77/281 (27%), Gaps = 49/281 (17%)
Query: 100 SDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMD-YNADVMEKFVVDLIN 158
+ V +R + D PG SD MD V + V L++
Sbjct: 44 PGAGGWSNYYRNVGPFVDA----GYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMD 99
Query: 159 APD-SPVSSSESDLVI---FGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGR 214
A D ++ GG A + + + + + P G P +F
Sbjct: 100 ALDIDRAH------LVGNAMGGATALNFALEYPDR--IG--KLILMGP--GGLGPSMFA- 146
Query: 215 DSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYA 274
+ G+ + + + ++ + +Y + +T +++ R+
Sbjct: 147 -------------PMPMEGIKLLFKLYAEPSYETLKQMLQVFLY-DQSLITEELLQGRWE 192
Query: 275 LTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTE----GSPRRSKAE 330
+R+ FL S + ++ K +
Sbjct: 193 AIQRQPEHL--KNFLISAQKAPLSTWDVTARLGEI--KAKTFITWGRDDRFVPLDHGLKL 248
Query: 331 MEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370
+ + A+ Q E+ + + FL+
Sbjct: 249 LWNIDDAR----LHVFSKCGAWAQWEHADEFNRLVIDFLRH 285
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 1e-06
Identities = 39/269 (14%), Positives = 76/269 (28%), Gaps = 29/269 (10%)
Query: 108 WRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR-PKMDYNADVMEKFVVDLINAPDSPVSS 166
W + I+ RV R +D G + D +A+ M K V +++ A
Sbjct: 54 WAVFTAAIISRVQ---CRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVEAMYG---D 107
Query: 167 SESDLVIFG---GGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYG 223
+++ G GG A T + + + V A D+ +
Sbjct: 108 LPPPIMLIGHSMGGAIAVHTASSNLVPSLLGLCMIDVVEGTA--------MDALNSMQNF 159
Query: 224 LLRGTLRAPGVGWMMYNMLVSN-EKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGAR 282
L + + + S + ++S S V + +K+
Sbjct: 160 LRGRPKTFKSLENAIEWSVKSGQIRNLESARVSM----VGQVKQCEGITSPEGSKKDHPY 215
Query: 283 YVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTK 342
LF P L++ + ++G +
Sbjct: 216 TWRIELAKTEKYWDGWFRGLSNLFLSCPI--PKLLLLAGVDRLDKDLTIGQMQGK---FQ 270
Query: 343 FVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370
+P E+ P VA+ + FL +
Sbjct: 271 MQVLPQCGHAVHEDAPDKVAEAVATFLIR 299
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 1e-06
Identities = 41/294 (13%), Positives = 70/294 (23%), Gaps = 74/294 (25%)
Query: 100 SDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-----KMDYNADVMEKFVV 154
WR + D+ + + D G G S+ P + + + ++
Sbjct: 40 PGAHAASNWRPIIPDLAEN-----FFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQIL 94
Query: 155 DLINAPDSPVSSSESDLVI---------FGGGHAATLTV----RAAKKNLVKPTAIAAVA 201
L+N I GG L V R K L+ A
Sbjct: 95 GLMNH-----------FGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNA 143
Query: 202 PTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNP 261
+ F D + L+ +Y+ +
Sbjct: 144 RPPELARLLAFYADPRLTPYRELIH---------SFVYD-------------PENF---- 177
Query: 262 DNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEG-KLPLLVVST 320
IV+SR+ + R E + A L +LV
Sbjct: 178 -PGMEEIVKSRFEVANDPEVR---RIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHG 233
Query: 321 EG----SPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369
S + LK A + V + Q E + L + +
Sbjct: 234 RQDRIVPLDTSLYLTKHLKHA----ELVVLDRCGHWAQLERWDAMGPMLMEHFR 283
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A Length = 318 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 2e-05
Identities = 34/254 (13%), Positives = 71/254 (27%), Gaps = 24/254 (9%)
Query: 124 WRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINA--PDSPVSSSESDLVI--FGGGH 178
R I D G+G S + Y K++ + V +G
Sbjct: 70 ARCIIPDLIGMGKSGKSGNGSYRLLDHYKYLTAWFELLNLPKKII-----FVGHDWGAA- 123
Query: 179 AATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMM 238
L A ++ I A+ + ++ D + + +++ M+
Sbjct: 124 ---LAFHYAYEH---QDRIKAIVHM-ESVVDVIESWDEWPDIEEDI--ALIKSEEGEKMV 174
Query: 239 YNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNS 298
E + S+ + P+ + + R+ P +
Sbjct: 175 LENNFFVETVLPSKIMRKL--EPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDV 232
Query: 299 REEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALK-GAKGVTKFVEVPGALLPQEEYP 357
+ A L L + E P + FV+V G QE+ P
Sbjct: 233 VQIVRNYNAYLRASDDLPKLFIESDPGFFSNAIVEGAKKFPNTE-FVKVKGLHFLQEDAP 291
Query: 358 AMVAQELYQFLQQT 371
+ + + F+++
Sbjct: 292 DEMGKYIKSFVERV 305
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 2e-05
Identities = 39/273 (14%), Positives = 71/273 (26%), Gaps = 77/273 (28%)
Query: 123 NWRATI-----------VDWPGLGYSDRP-KMDYNADVMEKFVVDLINAPDSPVSSSESD 170
W I VD G P + +++D+ +
Sbjct: 82 MWYPNIADWSSKYRTYAVDIIGDKNKSIPENVSGTRTDYANWLLDVFDN----------- 130
Query: 171 LVI---------FGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETR 221
L I GG H +R VK AI + A T+ + +
Sbjct: 131 LGIEKSHMIGLSLGGLHTMNFLLRMP--ERVKSAAILSPAETFLPFHHDFYKYALGLTAS 188
Query: 222 YGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGA 281
G+ + WMM + + + P V+ A +
Sbjct: 189 NGV------ETFLNWMMND--------------------QNVLHPIFVKQFKAGVMWQDG 222
Query: 282 RYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEG----SPRRSKAEM-EALKG 336
P G + EE ++P+L++ E P + +
Sbjct: 223 SRNPNPNADGFPYVF-TDEELRSA------RVPILLLLGEHEVIYDPHSALHRASSFVPD 275
Query: 337 AKGVTKFVEVPGAL-LPQEEYPAMVAQELYQFL 368
+ + A + E P V + + +F
Sbjct: 276 IE----AEVIKNAGHVLSMEQPTYVNERVMRFF 304
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 44.4 bits (104), Expect = 4e-05
Identities = 32/285 (11%), Positives = 79/285 (27%), Gaps = 27/285 (9%)
Query: 106 EEWRLVAQDIVQRVGKVNWRAT---IVDWPGLGYSDRP-----KMDYNADVMEKFVVDLI 157
W +V + N+ ++D G S ++N + V+ +
Sbjct: 66 VVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIA 125
Query: 158 NAPDSPVSSSESDLVIFG---GGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGR 214
+ S + V+ G GG A + + + P I GR
Sbjct: 126 TCELGSIDSHPALNVVIGHSMGGFQA---LACDVLQPNLFHLLILIEPVVITRKAIGAGR 182
Query: 215 DSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDN------VTPGI 268
+ + + + + + ++ ++N + +
Sbjct: 183 PGLPPDSPQIPENLYNS--LRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFER 240
Query: 269 VESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEG-KLPLLVVSTEGSPRRS 327
++ R LL +N + L ++++ + + + S
Sbjct: 241 TKASGDDEDGGPVR-TKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCP 299
Query: 328 KAEMEALKGAKGVTKFVEVPGA--LLPQEEYPAMVAQELYQFLQQ 370
L+ +PG L+ E P +V + + + +
Sbjct: 300 PQNQLFLQKTLQNYHLDVIPGGSHLVNVEA-PDLVIERINHHIHE 343
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 36/266 (13%), Positives = 68/266 (25%), Gaps = 34/266 (12%)
Query: 108 WRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKFVVDLINAPDSPVS 165
+R ++ R D G G SD+P Y + ++ ++A
Sbjct: 62 YR----KMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVYTFGFHRRSLLAFLDALQ---- 113
Query: 166 SSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLL 225
+ + L + P + + L + E+ +
Sbjct: 114 --LERVTLVCQDWGGILGLTLPVDR---PQLVDRLIVM-NTALAVGLSPGKGFESWRDFV 167
Query: 226 RGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVP 285
+ VG +M + A + Y + + P+ + G R P
Sbjct: 168 ANSPDLD-VGKLMQRAIPGITDAEVAAYDA-PFPGPEF--------------KAGVRRFP 211
Query: 286 AAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALK-GAKGVTKFV 344
A F + P + P M L+ +G + +
Sbjct: 212 AIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLGPEVMGMLRQAIRGCPEPM 271
Query: 345 EVPGAL-LPQEEYPAMVAQELYQFLQ 369
V QE + L F Q
Sbjct: 272 IVEAGGHFVQEHGEPIARAALAAFGQ 297
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 39/273 (14%), Positives = 76/273 (27%), Gaps = 54/273 (19%)
Query: 108 WRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA--PDSPVS 165
+ + + R + VD G G SD+P+ Y A+ + LI +
Sbjct: 84 FEPLMIRLSDR-----FTTIAVDQRGHGLSDKPETGYEANDYADDIAGLIRTLARGHAI- 137
Query: 166 SSESDLVI---FGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRY 222
++ G ++ T + LV ++ A+ T + ++ +
Sbjct: 138 ------LVGHSLGARNSVTAAAKYPD--LV--RSVVAIDFTPYIETEALDALEARVNAGS 187
Query: 223 GLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGAR 282
L V + P+ I + +
Sbjct: 188 QLFE---DIKAVEAYLAGRY------------------PNIPADAIRIRAESGYQPVDGG 226
Query: 283 YVPAAFLTGLLDPVNSREEFLQLFADLEGKL--PLLVVSTEGS---PRRSKAEMEALKGA 337
P A + + + P+L+V E S + A+ L
Sbjct: 227 LRPLASSAAMAQ---TARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRL--R 281
Query: 338 KGVTKFVEVPGAL-LPQEEYPAMVAQELYQFLQ 369
+ V VPGA E P + + + F+
Sbjct: 282 PDLP-VVVVPGADHYVNEVSPEITLKAITNFID 313
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} Length = 309 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 52/276 (18%), Positives = 90/276 (32%), Gaps = 34/276 (12%)
Query: 108 WRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167
WR +I+ V +RA D G+G S +P ++Y ++ I+A
Sbjct: 45 WR----NIIPYVVAAGYRAVAPDLIGMGDSAKPDIEYRLQDHVAYMDGFIDALG------ 94
Query: 168 ESDLVIFG---GGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDS--SMETRY 222
D+V+ G R A+ N P +AAVA +P S +M +
Sbjct: 95 LDDMVLVIHDWGSVIGM---RHARLN---PDRVAAVAFM-EALVPPALPMPSYEAMGPQL 147
Query: 223 GLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVES-RYALTK---R 278
G L LR VG M V + + +++ + + R R
Sbjct: 148 GPLFRDLRTADVGEKM----VLDGNFFVETILPEMGV-VRSLSEAEMAAYRAPFPTRQSR 202
Query: 279 KGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALK-GA 337
P G E + +P L+ E K ++ L
Sbjct: 203 LPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASPIPKLLFHAEPGALAPKPVVDYLSENV 262
Query: 338 KGVTKFVEVPGAL-LPQEEYPAMVAQELYQFLQQTF 372
+ V QE++P ++ Q + +L++
Sbjct: 263 PNLE-VRFVGAGTHFLQEDHPHLIGQGIADWLRRNK 297
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 3e-04
Identities = 37/274 (13%), Positives = 82/274 (29%), Gaps = 54/274 (19%)
Query: 108 WRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA----PDSP 163
++ + Q++ +R + +W G G S D+ K +++++ P
Sbjct: 43 YKYLIQELDAD-----FRVIVPNWRGHGLSPSEVPDFGYQEQVKDALEILDQLGVETFLP 97
Query: 164 VSSSESDLVIFGGGHAATLTVRAA----KKNLVKPTAIAAVAPTWAGPLPIVFGRDSSME 219
VS S GG L +A + ++ + A P +A L ++ + E
Sbjct: 98 VSHS------HGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKDPERWRE 151
Query: 220 TRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRK 279
+GL L + ++ + + Y R
Sbjct: 152 GTHGLFDVWLDGHDEKRV-----------------------RHHLLEEMADYGYDCWGRS 188
Query: 280 GARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEAL-KGAK 338
G A G + A+L P+ + ++ + + +
Sbjct: 189 GRVIEDAYGRNGSPMQM---------MANLTKTRPIRHIFSQPTEPEYEKINSDFAEQHP 239
Query: 339 GVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371
+ + ++ G P + P A + +F
Sbjct: 240 WFS-YAKLGGPTHFPAIDVPDRAAVHIREFATAI 272
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 4e-04
Identities = 27/279 (9%), Positives = 68/279 (24%), Gaps = 64/279 (22%)
Query: 108 WRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167
L + + ++ +D PG+G SD + +V+E + +
Sbjct: 37 TCLFFEPLSNVGQ---YQRIYLDLPGMGNSDPISPSTSDNVLETLIEAIEEI-------- 85
Query: 168 ESDLVI---------FGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSM 218
+ +GG A + + + P
Sbjct: 86 ---IGARRFILYGHSYGGYLAQAIAFHLK--DQTL--GVFLTCPVITADHSKRLTGKHIN 138
Query: 219 ETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKR 278
+ + ++ N++++N+ Y
Sbjct: 139 ILEEDINPVENKEYFADFLSMNVIINNQAWH----------------------DYQNLII 176
Query: 279 KGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEG------SPRRSKAEME 332
G + F+ L + N F + ++ + P ++ G + +
Sbjct: 177 PGLQKEDKTFIDQLQN--NYSFTFEEKLKNINYQFPFKIMV--GRNDQVVGYQEQLKLIN 232
Query: 333 ALKGAKGVTKFVEVPGAL-LPQEEYPAMVAQELYQFLQQ 370
+ + V + + V FL +
Sbjct: 233 HNENG----EIVLLNRTGHNLMIDQREAVGFHFDLFLDE 267
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 4e-04
Identities = 37/279 (13%), Positives = 64/279 (22%), Gaps = 45/279 (16%)
Query: 108 WRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSS 166
W + +R VD G S +P Y+ + L+
Sbjct: 62 WERTIDVLADA----GYRVIAVDQVGFCKSSKPAHYQYSFQQLAANTHALLERLG----- 112
Query: 167 SESDLVI----FGGGHAATLTVRAAK--KNLVKPTAIAAVAPTWAGPLPIVFGRDSSMET 220
+ + GG A + + + LV + + L + +
Sbjct: 113 -VARASVIGHSMGGMLATRYALLYPRQVERLV---LVNPIGLEDWKALGVPWRSVDDWYR 168
Query: 221 RYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKG 280
R Y E Q ++ +Y + +
Sbjct: 169 RDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGR--ESVAWNSALTYDMIF 226
Query: 281 ARYVPAAF---------LTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEM 331
+ V L G D ++ L + K
Sbjct: 227 TQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAP---------AELKARLGNYAQLGKDAA 277
Query: 332 EALKGAKGVTKFVEVPGAL-LPQEEYPAMVAQELYQFLQ 369
+ A VE P PQ + P Q L + LQ
Sbjct: 278 RRIPQA----TLVEFPDLGHTPQIQAPERFHQALLEGLQ 312
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 376 | |||
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 100.0 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 100.0 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 100.0 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 100.0 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 100.0 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 100.0 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 100.0 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 100.0 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 100.0 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 100.0 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 100.0 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 100.0 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.98 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.97 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.97 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.97 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.97 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.97 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.97 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.97 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.97 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.97 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.97 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.97 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.97 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.95 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.97 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.97 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.97 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.97 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.97 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.97 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.97 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.97 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.97 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.97 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.97 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.96 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.96 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.96 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.96 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.96 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.96 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.96 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.96 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.95 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.95 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.95 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.95 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.95 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.94 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.93 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.93 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.93 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.93 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.93 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.93 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.92 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.92 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.92 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.92 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.92 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.92 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.92 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.91 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.91 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.91 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.91 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.91 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.91 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.9 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.9 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.9 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.9 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.9 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.9 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.9 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.9 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.89 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.89 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.89 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.88 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.88 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.88 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.88 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.87 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.87 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.87 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.87 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.87 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.87 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.86 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.86 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.86 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.86 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.86 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.86 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.85 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.85 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.85 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.85 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.85 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.85 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.85 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.85 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.84 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.84 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.83 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.83 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.83 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.83 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.83 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.83 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.83 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.83 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.82 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.82 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.82 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.82 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.81 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.81 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.8 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.8 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.8 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.8 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.79 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.79 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.79 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.79 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.79 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.79 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.79 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.79 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.78 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.78 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.78 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.76 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.76 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.76 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.76 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.75 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.75 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.74 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.73 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.73 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.72 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.71 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.71 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.7 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.69 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.69 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.69 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.68 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.68 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.67 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.66 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.64 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.63 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.63 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.63 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.63 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.63 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.61 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.6 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.59 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.59 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.56 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.56 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.55 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.54 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.54 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.53 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.48 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.44 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.43 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.42 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.4 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.32 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.28 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.25 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.14 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.12 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.68 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.62 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.61 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.58 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 98.49 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.4 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 98.34 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 98.34 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 98.24 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.23 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.16 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 98.14 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 98.14 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 98.1 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.08 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.01 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 97.99 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 97.96 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 97.95 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 97.79 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.68 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 97.63 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.62 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 97.59 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 97.58 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 97.57 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 97.47 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.47 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 97.23 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.14 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.07 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 96.54 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 96.21 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 96.12 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 95.84 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 95.75 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 95.52 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 95.32 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 95.15 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 95.13 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 95.0 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 94.97 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 94.85 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 94.64 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 94.04 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 92.45 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 91.47 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 90.96 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 89.08 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 88.98 | |
| 3pa8_A | 254 | Toxin B; CLAN CD cysteine protease, protease, toxi | 83.26 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 81.49 |
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=274.64 Aligned_cols=255 Identities=14% Similarity=0.160 Sum_probs=178.3
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHH
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVME 150 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 150 (376)
..+|.+|+|...|++. +|+|||+||++ .+...|+.+++.|++ +|+||++|+||||.|+.+...++.++++
T Consensus 11 ~~~g~~l~y~~~G~~~---~p~lvl~hG~~--~~~~~w~~~~~~L~~-----~~~vi~~D~rG~G~S~~~~~~~~~~~~a 80 (266)
T 3om8_A 11 TSDGASLAYRLDGAAE---KPLLALSNSIG--TTLHMWDAQLPALTR-----HFRVLRYDARGHGASSVPPGPYTLARLG 80 (266)
T ss_dssp CTTSCEEEEEEESCTT---SCEEEEECCTT--CCGGGGGGGHHHHHT-----TCEEEEECCTTSTTSCCCCSCCCHHHHH
T ss_pred ccCCcEEEEEecCCCC---CCEEEEeCCCc--cCHHHHHHHHHHhhc-----CcEEEEEcCCCCCCCCCCCCCCCHHHHH
Confidence 4569999999999754 78899999999 999999999999998 8999999999999999777789999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
+|+.+++++++ .++++|+||||||.+|+.+|.++|++|+++|++++..... .. ......+.....
T Consensus 81 ~dl~~~l~~l~------~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~------~~---~~~~~~~~~~~~ 145 (266)
T 3om8_A 81 EDVLELLDALE------VRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLG------PA---AQWDERIAAVLQ 145 (266)
T ss_dssp HHHHHHHHHTT------CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCC------CS---HHHHHHHHHHHH
T ss_pred HHHHHHHHHhC------CCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCC------ch---hHHHHHHHHHHc
Confidence 99999999997 7889999999999999999999999999999998743110 00 000011111111
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhccc
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLE 310 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 310 (376)
........ ...+..++..... ...++..+.+....... ....+...+....... ..+.+.+|
T Consensus 146 ~~~~~~~~-------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d-----~~~~l~~i- 207 (266)
T 3om8_A 146 AEDMSETA-------AGFLGNWFPPALL----ERAEPVVERFRAMLMAT-NRHGLAGSFAAVRDTD-----LRAQLARI- 207 (266)
T ss_dssp CSSSHHHH-------HHHHHHHSCHHHH----HSCCHHHHHHHHHHHTS-CHHHHHHHHHHHHTCB-----CTTTGGGC-
T ss_pred cccHHHHH-------HHHHHHhcChhhh----hcChHHHHHHHHHHHhC-CHHHHHHHHHHhhccc-----hhhHhcCC-
Confidence 00000000 0011111100000 01112222222221111 1111111111111111 23457788
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHHHHH
Q 017180 311 GKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 311 ~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~ 369 (376)
++|+|+|+|++|.+++.+..+.+.+.+|++++++++++|++++|+|++|++.|.+||.
T Consensus 208 -~~P~Lvi~G~~D~~~~~~~~~~l~~~ip~a~~~~i~~gH~~~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 208 -ERPTLVIAGAYDTVTAASHGELIAASIAGARLVTLPAVHLSNVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp -CSCEEEEEETTCSSSCHHHHHHHHHHSTTCEEEEESCCSCHHHHCHHHHHHHHHHHHT
T ss_pred -CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCccccCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999984499999999999999999985
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=274.73 Aligned_cols=273 Identities=12% Similarity=0.099 Sum_probs=182.9
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
+|.+++|...|++. +++|||+||++ ++...|+.+++.|++ +|+||++|+||||.|+.+...|+++++++|
T Consensus 15 ~g~~l~y~~~G~g~---~~pvvllHG~~--~~~~~w~~~~~~L~~-----~~~via~Dl~G~G~S~~~~~~~~~~~~a~d 84 (316)
T 3afi_E 15 LGSSMAYRETGAQD---APVVLFLHGNP--TSSHIWRNILPLVSP-----VAHCIAPDLIGFGQSGKPDIAYRFFDHVRY 84 (316)
T ss_dssp TTEEEEEEEESCTT---SCEEEEECCTT--CCGGGGTTTHHHHTT-----TSEEEEECCTTSTTSCCCSSCCCHHHHHHH
T ss_pred CCEEEEEEEeCCCC---CCeEEEECCCC--CchHHHHHHHHHHhh-----CCEEEEECCCCCCCCCCCCCCCCHHHHHHH
Confidence 38899999998632 34899999999 999999999999998 799999999999999977678999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCC---C-ch----hhhhHH
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRD---S-SM----ETRYGL 224 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~---~-~~----~~~~~~ 224 (376)
+.+++++++ .++++||||||||.+|+.+|.++|++|+++|++++... .+...... . .. ......
T Consensus 85 l~~ll~~l~------~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (316)
T 3afi_E 85 LDAFIEQRG------VTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRP--MPTWQDFHHTEVAEEQDHAEAARAV 156 (316)
T ss_dssp HHHHHHHTT------CCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCC--BSSGGGTTCCCCGGGHHHHHHHHHH
T ss_pred HHHHHHHcC------CCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCC--cchhhhccchhhccccccchhHHHH
Confidence 999999997 68899999999999999999999999999999987321 00000000 0 00 000011
Q ss_pred HHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCC------c
Q 017180 225 LRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVN------S 298 (376)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 298 (376)
. ..+..+......... ....+..... .. ......++..+.+......+........+......... .
T Consensus 157 ~-~~~~~~~~~~~~~~~---~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (316)
T 3afi_E 157 F-RKFRTPGEGEAMILE---ANAFVERVLP-GG--IVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEA 229 (316)
T ss_dssp H-HHHTSTTHHHHHHTT---SCHHHHTTTG-GG--CSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHH
T ss_pred H-HHhcCCchhhHHHhc---cchHHHHhcc-cc--cCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhH
Confidence 1 111111111111100 0011110011 00 11234444444333221111111111222111110000 1
Q ss_pred HHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 299 REEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 299 ~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
...+.+.++++ ++|+|+|+|++|.+++.+..+.+.+.+|++++++++++ |++++|+|++|++.|.+||++..
T Consensus 230 ~~~~~~~l~~i--~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~~ 302 (316)
T 3afi_E 230 LQSAHAALAAS--SYPKLLFTGEPGALVSPEFAERFAASLTRCALIRLGAGLHYLQEDHADAIGRSVAGWIAGIE 302 (316)
T ss_dssp HHHHHHHHHHC--CSCEEEEEEEECSSSCHHHHHHHHHHSSSEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhcc--CCCeEEEecCCCCccCHHHHHHHHHhCCCCeEEEcCCCCCCchhhCHHHHHHHHHHHHhhcC
Confidence 11234556778 99999999999999999999999999999999999998 99999999999999999998764
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=267.85 Aligned_cols=270 Identities=13% Similarity=0.112 Sum_probs=179.9
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC-----CCCH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM-----DYNA 146 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~-----~~~~ 146 (376)
.+|.+++|...|+ +++|||+||++ ++...|..+++.|++ .|+||++|+||||.|+.+ . .|+.
T Consensus 16 ~~g~~l~y~~~G~-----g~~lvllHG~~--~~~~~w~~~~~~L~~-----~~~via~Dl~G~G~S~~~-~~~~~~~~~~ 82 (294)
T 1ehy_A 16 LPDVKIHYVREGA-----GPTLLLLHGWP--GFWWEWSKVIGPLAE-----HYDVIVPDLRGFGDSEKP-DLNDLSKYSL 82 (294)
T ss_dssp CSSCEEEEEEEEC-----SSEEEEECCSS--CCGGGGHHHHHHHHT-----TSEEEEECCTTSTTSCCC-CTTCGGGGCH
T ss_pred ECCEEEEEEEcCC-----CCEEEEECCCC--cchhhHHHHHHHHhh-----cCEEEecCCCCCCCCCCC-ccccccCcCH
Confidence 3488999999984 78999999999 999999999999998 799999999999999977 4 6999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHH
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLR 226 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 226 (376)
+++++|+.+++++++ .++++||||||||.+|+.+|.++|++|+++|++++...+..+....... ....+..
T Consensus 83 ~~~a~dl~~ll~~l~------~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~---~~~~~~~ 153 (294)
T 1ehy_A 83 DKAADDQAALLDALG------IEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGH---VHESWYS 153 (294)
T ss_dssp HHHHHHHHHHHHHTT------CCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC--------------CCHHH
T ss_pred HHHHHHHHHHHHHcC------CCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchh---ccCceEE
Confidence 999999999999997 7889999999999999999999999999999999632111110000000 0000000
Q ss_pred hhhccCchhhHHhhhhh-ccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHH
Q 017180 227 GTLRAPGVGWMMYNMLV-SNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQL 305 (376)
Q Consensus 227 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (376)
.+..+.+...+..... .....++. +......+....+++..+.+......+........+........... .....
T Consensus 154 -~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 230 (294)
T 1ehy_A 154 -QFHQLDMAVEVVGSSREVCKKYFKH-FFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAAL-WTDLD 230 (294)
T ss_dssp -HHTTCHHHHHHHTSCHHHHHHHHHH-HHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCC-CCTGG
T ss_pred -EecCcchhHHHhccchhHHHHHHHH-HhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhh-cCCcc
Confidence 0000111111110000 00122222 22222223345566655555544433222111111111110000000 00113
Q ss_pred HhcccCCCcEEEEEeCCCCCCC-HHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHH
Q 017180 306 FADLEGKLPLLVVSTEGSPRRS-KAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFL 368 (376)
Q Consensus 306 ~~~i~~~~Pvlii~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl 368 (376)
+.++ ++|+|+|+|++|.+++ .+..+.+.+..+++++++++++ |++++|+|+++++.|.+||
T Consensus 231 l~~i--~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 231 HTMS--DLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAF 293 (294)
T ss_dssp GSCB--CSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHHHHC
T ss_pred cCcC--CCCEEEEEeCCCCCcchHHHHHHHHHHcCCCceEEeCCCCCChhhhCHHHHHHHHHHHh
Confidence 5577 9999999999999998 4677778888899999999998 9999999999999999997
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=265.06 Aligned_cols=253 Identities=14% Similarity=0.199 Sum_probs=174.7
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccc---hHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTV---EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADV 148 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~---~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~ 148 (376)
+|.+++|...|+ +++|||+||++ .+. ..|..+++.|++ +|+||++|+||||.|+.+. ..++.++
T Consensus 13 ~g~~l~y~~~G~-----g~~vvllHG~~--~~~~~~~~w~~~~~~L~~-----~~~vi~~Dl~G~G~S~~~~~~~~~~~~ 80 (282)
T 1iup_A 13 AGVLTNYHDVGE-----GQPVILIHGSG--PGVSAYANWRLTIPALSK-----FYRVIAPDMVGFGFTDRPENYNYSKDS 80 (282)
T ss_dssp TTEEEEEEEECC-----SSEEEEECCCC--TTCCHHHHHTTTHHHHTT-----TSEEEEECCTTSTTSCCCTTCCCCHHH
T ss_pred CCEEEEEEecCC-----CCeEEEECCCC--CCccHHHHHHHHHHhhcc-----CCEEEEECCCCCCCCCCCCCCCCCHHH
Confidence 489999999985 67899999987 433 488889999976 8999999999999999664 4789999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
+++|+.+++++++ .++++|+||||||.+|+.+|.++|++|+++|+++|......+ ........ ..
T Consensus 81 ~a~dl~~~l~~l~------~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~--------~~~~~~~~-~~ 145 (282)
T 1iup_A 81 WVDHIIGIMDALE------IEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDV--------TEGLNAVW-GY 145 (282)
T ss_dssp HHHHHHHHHHHTT------CCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCC--------CHHHHHHH-TC
T ss_pred HHHHHHHHHHHhC------CCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCC--------CHHHHHHh-cC
Confidence 9999999999997 688999999999999999999999999999999985321000 00000000 00
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCc-HHHH---HH
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNS-REEF---LQ 304 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~ 304 (376)
.+. ...+..... ....+.....++..+........+.....+...... .... .+.+ .+
T Consensus 146 --~~~------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 207 (282)
T 1iup_A 146 --TPS------------IENMRNLLD-IFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPE---PRQRWIDALASSDE 207 (282)
T ss_dssp --CSC------------HHHHHHHHH-HHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCS---STHHHHHHHCCCHH
T ss_pred --CCc------------HHHHHHHHH-HhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhc---cccccccccccchh
Confidence 000 011111111 111111123333333322222111111111111100 0000 0001 15
Q ss_pred HHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 305 LFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 305 ~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
.+.++ ++|+|+|+|++|.+++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+||++..
T Consensus 208 ~l~~i--~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 274 (282)
T 1iup_A 208 DIKTL--PNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEAN 274 (282)
T ss_dssp HHTTC--CSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHTC-
T ss_pred hhhhc--CCCEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEECCCCCCccccCHHHHHHHHHHHHhcCC
Confidence 67788 99999999999999999999999999999999999998 99999999999999999998754
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=264.92 Aligned_cols=261 Identities=13% Similarity=0.161 Sum_probs=176.1
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK 151 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 151 (376)
.+|.+++|...|+ +++|||+||++ ++...|..+++.|.+. ||+||++|+||||.|+.+...++.+++++
T Consensus 14 ~~g~~l~y~~~G~-----g~~vvllHG~~--~~~~~w~~~~~~l~~~----g~~vi~~D~~G~G~S~~~~~~~~~~~~a~ 82 (281)
T 3fob_A 14 QAPIEIYYEDHGT-----GKPVVLIHGWP--LSGRSWEYQVPALVEA----GYRVITYDRRGFGKSSQPWEGYEYDTFTS 82 (281)
T ss_dssp TEEEEEEEEEESS-----SEEEEEECCTT--CCGGGGTTTHHHHHHT----TEEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred CCceEEEEEECCC-----CCeEEEECCCC--CcHHHHHHHHHHHHhC----CCEEEEeCCCCCCCCCCCccccCHHHHHH
Confidence 4588999999996 67899999999 9999999999999875 89999999999999998777899999999
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh-CCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK-NLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~-~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
|+.+++++++ .++++|+||||||.+++.++.. +|++++++|++++................. ......+.
T Consensus 83 dl~~ll~~l~------~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~--~~~~~~~~- 153 (281)
T 3fob_A 83 DLHQLLEQLE------LQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALD--DATIETFK- 153 (281)
T ss_dssp HHHHHHHHTT------CCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBC--HHHHHHHH-
T ss_pred HHHHHHHHcC------CCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccc--hhHHHHHH-
Confidence 9999999997 7889999999999988877665 589999999998642111000000000000 00000000
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCC---CCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHh
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSN---PDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFA 307 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (376)
..... .....+..+ ....+.. .....+............. ................ ..+.++
T Consensus 154 -----~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d-----~~~~l~ 218 (281)
T 3fob_A 154 -----SGVIN---DRLAFLDEF-TKGFFAAGDRTDLVSESFRLYNWDIAAGA-SPKGTLDCITAFSKTD-----FRKDLE 218 (281)
T ss_dssp -----HHHHH---HHHHHHHHH-HHHHTCBTTBCCSSCHHHHHHHHHHHHTS-CHHHHHHHHHHHHHCC-----CHHHHT
T ss_pred -----HHhhh---hHHHHHHHH-HHHhcccccccccchHHHHHHhhhhhccc-ChHHHHHHHHHccccc-----hhhhhh
Confidence 00000 001111111 1111111 1233333333332222211 1111111111111111 345678
Q ss_pred cccCCCcEEEEEeCCCCCCCHHHH-HHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 308 DLEGKLPLLVVSTEGSPRRSKAEM-EALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 308 ~i~~~~Pvlii~G~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
++ ++|||+|+|++|.++|.+.. +.+.+..|++++++++++ |++++|+|+++++.|.+||+
T Consensus 219 ~i--~~P~Lii~G~~D~~~p~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 219 KF--NIPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALIKGGPHGLNATHAKEFNEALLLFLK 280 (281)
T ss_dssp TC--CSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred hc--CCCEEEEecCCCCCcCHHHHHHHHHHhCCCceEEEeCCCCCchhhhhHHHHHHHHHHHhh
Confidence 88 99999999999999998865 666788999999999999 99999999999999999996
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=264.55 Aligned_cols=258 Identities=18% Similarity=0.235 Sum_probs=179.6
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
+|.+++|...|+ +++|||+||++ .+...|..+++.|.+. ||+|+++|+||||.|+.+...++.+++++|
T Consensus 11 ~g~~l~y~~~g~-----g~pvvllHG~~--~~~~~~~~~~~~L~~~----g~~vi~~D~~G~G~S~~~~~~~~~~~~a~d 79 (277)
T 1brt_A 11 TSIDLYYEDHGT-----GQPVVLIHGFP--LSGHSWERQSAALLDA----GYRVITYDRRGFGQSSQPTTGYDYDTFAAD 79 (277)
T ss_dssp EEEEEEEEEECS-----SSEEEEECCTT--CCGGGGHHHHHHHHHT----TCEEEEECCTTSTTSCCCSSCCSHHHHHHH
T ss_pred CCcEEEEEEcCC-----CCeEEEECCCC--CcHHHHHHHHHHHhhC----CCEEEEeCCCCCCCCCCCCCCccHHHHHHH
Confidence 488999999985 66899999999 9999999999999885 899999999999999977778999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCC-CcceEEEeccCCCCCCCcccCCCC--chhhhhHHHHhhh
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV-KPTAIAAVAPTWAGPLPIVFGRDS--SMETRYGLLRGTL 229 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 229 (376)
+.+++++++ .++++|+||||||.+++.+|.++|+ +|+++|++++.............. .............
T Consensus 80 l~~~l~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (277)
T 1brt_A 80 LNTVLETLD------LQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVK 153 (277)
T ss_dssp HHHHHHHHT------CCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHH
T ss_pred HHHHHHHhC------CCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHh
Confidence 999999997 6789999999999999999999999 999999998732111000000000 0000000000000
Q ss_pred ccCchhhHHhhhhhccHHHHHHHHHhcccC----CCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHH
Q 017180 230 RAPGVGWMMYNMLVSNEKAIQSQYKSHVYS----NPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQL 305 (376)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (376)
. .....+.... ...+. .....+++..+.+......... ......+... ... ..+.
T Consensus 154 ----------~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~-----~~~~ 212 (277)
T 1brt_A 154 ----------A---DRYAFYTGFF-NDFYNLDENLGTRISEEAVRNSWNTAASGGF-FAAAAAPTTW-YTD-----FRAD 212 (277)
T ss_dssp ----------H---CHHHHHHHHH-HHHTTHHHHBTTTBCHHHHHHHHHHHHHSCH-HHHHHGGGGT-TCC-----CTTT
T ss_pred ----------c---CchhhHHHHH-HHHhhccccccccCCHHHHHHHHHHHhccch-HHHHHHHHHH-hcc-----chhh
Confidence 0 0001111111 01111 0123445555544433322211 1111112111 111 2335
Q ss_pred HhcccCCCcEEEEEeCCCCCCCHHHH-HHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 306 FADLEGKLPLLVVSTEGSPRRSKAEM-EALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 306 ~~~i~~~~Pvlii~G~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
++++ ++|+|+|+|++|.+++.+.. +.+.+..+++++++++++ |++++|+|+++++.|.+||.+
T Consensus 213 l~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 277 (277)
T 1brt_A 213 IPRI--DVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp GGGC--CSCEEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred cccC--CCCeEEEecCCCccCChHHHHHHHHHHCCCCcEEEeCCCCcchhhhCHHHHHHHHHHHHhC
Confidence 6788 99999999999999998877 888888999999999998 999999999999999999964
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=258.15 Aligned_cols=263 Identities=11% Similarity=0.080 Sum_probs=176.3
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK 151 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 151 (376)
.+|.+++|...|+++ +++|||+||++ .+...|..+++.|.+. ||+|+++|+||||.|+.+...++++++++
T Consensus 7 ~~g~~l~y~~~g~~~---~~~vvllHG~~--~~~~~w~~~~~~L~~~----g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 77 (276)
T 1zoi_A 7 KDGVQIFYKDWGPRD---APVIHFHHGWP--LSADDWDAQLLFFLAH----GYRVVAHDRRGHGRSSQVWDGHDMDHYAD 77 (276)
T ss_dssp TTSCEEEEEEESCTT---SCEEEEECCTT--CCGGGGHHHHHHHHHT----TCEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred CCCcEEEEEecCCCC---CCeEEEECCCC--cchhHHHHHHHHHHhC----CCEEEEecCCCCCCCCCCCCCCCHHHHHH
Confidence 358899999998543 77899999999 9999999999999986 89999999999999997767799999999
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhC-CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN-LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~-p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
|+.+++++++ .++++|+||||||.+++.+|.++ |++|+++|++++......................+...
T Consensus 78 d~~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 149 (276)
T 1zoi_A 78 DVAAVVAHLG------IQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQ-- 149 (276)
T ss_dssp HHHHHHHHHT------CTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHH--
T ss_pred HHHHHHHHhC------CCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHHHH--
Confidence 9999999997 67899999999999999988877 99999999998742110000000000000000000000
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccC---CCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHh
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYS---NPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFA 307 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (376)
... .....+........+. ......++..+.+......... ......+....... ..+.++
T Consensus 150 -------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~l~ 213 (276)
T 1zoi_A 150 -------VAS---NRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSA-KAHYDGIVAFSQTD-----FTEDLK 213 (276)
T ss_dssp -------HHH---CHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCH-HHHHHHHHHHHSCC-----CHHHHH
T ss_pred -------HHH---hHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhH-HHHHHHHHHhcccc-----hhhhcc
Confidence 000 0011112111101111 0112334444433322111111 11111111111111 345677
Q ss_pred cccCCCcEEEEEeCCCCCCCHH-HHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 308 DLEGKLPLLVVSTEGSPRRSKA-EMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 308 ~i~~~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
++ ++|+|+|+|++|.+++.+ ..+.+.+..+++++++++++ |++++|+|+++++.|.+||+
T Consensus 214 ~i--~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 214 GI--QQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGMPTTHADVINADLLAFIR 275 (276)
T ss_dssp HC--CSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred cc--CCCEEEEEcCCCcccChHHHHHHHHhhCCCceEEEcCCCCCchhhhCHHHHHHHHHHHhc
Confidence 88 999999999999999877 45666777899999999998 99999999999999999996
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=261.41 Aligned_cols=253 Identities=11% Similarity=0.081 Sum_probs=169.0
Q ss_pred EEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHHHHHHH
Q 017180 77 IYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKFVVD 155 (376)
Q Consensus 77 l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~~l~~ 155 (376)
|+|...|.+.+ .+|+|||+||++ ++...|..+++.|.+ +|+||++|+||||.|+.+ ...++++++++|+.+
T Consensus 3 i~y~~~g~~~~-~~~~vvllHG~~--~~~~~w~~~~~~L~~-----~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~ 74 (268)
T 3v48_A 3 MKLSLSPPPYA-DAPVVVLISGLG--GSGSYWLPQLAVLEQ-----EYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQ 74 (268)
T ss_dssp SCCEECCCSST-TCCEEEEECCTT--CCGGGGHHHHHHHHT-----TSEEEECCCTTBTTBCCCCCTTCCHHHHHHHHHH
T ss_pred eEEEecCCCCC-CCCEEEEeCCCC--ccHHHHHHHHHHHhh-----cCeEEEECCCCCCCCCCCccccCCHHHHHHHHHH
Confidence 56777775322 178999999999 999999999999988 899999999999999855 357899999999999
Q ss_pred HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchh
Q 017180 156 LINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVG 235 (376)
Q Consensus 156 ~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (376)
++++++ .++++|+||||||.+++.+|.++|++|+++|++++.... ....................
T Consensus 75 ~l~~l~------~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~--------~~~~~~~~~~~~~~~~~~~~- 139 (268)
T 3v48_A 75 ALVAAG------IEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRI--------NAHTRRCFQVRERLLYSGGA- 139 (268)
T ss_dssp HHHHTT------CCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBC--------CHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHcC------CCCeEEEEecHHHHHHHHHHHhChhhceEEEEecccccc--------chhhhHHHHHHHHHHhccch-
Confidence 999997 788999999999999999999999999999999873210 00000000000000000000
Q ss_pred hHHhhhhhccHHHHHH---HH-HhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccC
Q 017180 236 WMMYNMLVSNEKAIQS---QY-KSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEG 311 (376)
Q Consensus 236 ~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 311 (376)
...... .. ...+.. ...+......................+....... ..+.+++|
T Consensus 140 ----------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----~~~~l~~i-- 199 (268)
T 3v48_A 140 ----------QAWVEAQPLFLYPADWMA---ARAPRLEAEDALALAHFQGKNNLLRRLNALKRAD-----FSHHADRI-- 199 (268)
T ss_dssp ----------HHHHHHHHHHHSCHHHHH---TTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCB-----CTTTGGGC--
T ss_pred ----------hhhhhhhhhhcCchhhhh---cccccchhhHHHHHhhcCchhHHHHHHHHHhccc-----hhhhhhcC--
Confidence 000000 00 000000 0000000000000000000001111110000000 22346778
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
++|||+|+|++|.+++.+..+.+.+..|++++++++++ |++++|+|++|++.|.+||.+..
T Consensus 200 ~~P~Lii~G~~D~~~p~~~~~~l~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~~ 261 (268)
T 3v48_A 200 RCPVQIICASDDLLVPTACSSELHAALPDSQKMVMPYGGHACNVTDPETFNALLLNGLASLL 261 (268)
T ss_dssp CSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEESSCCTTHHHHCHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCCcccCHHHHHHHHHhCCcCeEEEeCCCCcchhhcCHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999998 99999999999999999998754
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-36 Score=259.52 Aligned_cols=261 Identities=13% Similarity=0.144 Sum_probs=172.4
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK 151 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 151 (376)
.+|.+++|...|+ +++|||+||++ ++...|..+++.|.+. ||+|+++|+||||.|+.+...++.+++++
T Consensus 6 ~~g~~l~y~~~G~-----g~~vvllHG~~--~~~~~w~~~~~~l~~~----g~~vi~~D~~G~G~S~~~~~~~~~~~~a~ 74 (271)
T 3ia2_A 6 KDGTQIYFKDWGS-----GKPVLFSHGWL--LDADMWEYQMEYLSSR----GYRTIAFDRRGFGRSDQPWTGNDYDTFAD 74 (271)
T ss_dssp TTSCEEEEEEESS-----SSEEEEECCTT--CCGGGGHHHHHHHHTT----TCEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred CCCCEEEEEccCC-----CCeEEEECCCC--CcHHHHHHHHHHHHhC----CceEEEecCCCCccCCCCCCCCCHHHHHH
Confidence 4689999999996 67899999999 9999999999999875 89999999999999997777899999999
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH-hCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK-KNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~-~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
|+.+++++++ .++++|+||||||.+++.++. .+|++|+++|++++.................. ......
T Consensus 75 d~~~~l~~l~------~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~---~~~~~~- 144 (271)
T 3ia2_A 75 DIAQLIEHLD------LKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLD---VFARFK- 144 (271)
T ss_dssp HHHHHHHHHT------CCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHH---HHHHHH-
T ss_pred HHHHHHHHhC------CCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHH---HHHHHH-
Confidence 9999999997 788999999999997776655 45999999999986321100000000000000 000000
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccC--CCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYS--NPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
..........+..... ..+. ......+............... .............. ..+.+.+
T Consensus 145 --------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~l~~ 209 (271)
T 3ia2_A 145 --------TELLKDRAQFISDFNA-PFYGINKGQVVSQGVQTQTLQIALLASL-KATVDCVTAFAETD-----FRPDMAK 209 (271)
T ss_dssp --------HHHHHHHHHHHHHHHH-HHHTGGGTCCCCHHHHHHHHHHHHHSCH-HHHHHHHHHHHHCB-----CHHHHTT
T ss_pred --------HHHHhhHHHHHHHhhH-hhhccccccccCHHHHHHHHhhhhhccH-HHHHHHHHHhhccC-----CcccccC
Confidence 0000000111111100 0000 0112333333322222111111 11111111100011 3456788
Q ss_pred ccCCCcEEEEEeCCCCCCCHHH-HHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAE-MEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+ ++|+|+|+|++|.++|.+. .+.+.+..+++++++++++ |+++.|+|+++++.|.+||++
T Consensus 210 i--~~P~Lvi~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~~ 271 (271)
T 3ia2_A 210 I--DVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp C--CSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred C--CCCEEEEEeCCCCcCChHHHHHHHHHhCCCceEEEEcCCCCcccccCHHHHHHHHHHHhhC
Confidence 8 9999999999999999877 4555677899999999999 999999999999999999964
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=269.63 Aligned_cols=261 Identities=12% Similarity=0.079 Sum_probs=172.9
Q ss_pred eeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHHHH
Q 017180 75 INIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKF 152 (376)
Q Consensus 75 ~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~~~ 152 (376)
.+++|...|+++. +++|||+||++ .+...|+.+++.|++. ||+||++|+||||.|+.+. ..|+++.+++|
T Consensus 34 ~~l~y~~~G~~~~--g~~vvllHG~~--~~~~~w~~~~~~L~~~----g~rvia~Dl~G~G~S~~~~~~~~y~~~~~a~d 105 (310)
T 1b6g_A 34 LRAHYLDEGNSDA--EDVFLCLHGEP--TWSYLYRKMIPVFAES----GARVIAPDFFGFGKSDKPVDEEDYTFEFHRNF 105 (310)
T ss_dssp CEEEEEEEECTTC--SCEEEECCCTT--CCGGGGTTTHHHHHHT----TCEEEEECCTTSTTSCEESCGGGCCHHHHHHH
T ss_pred eEEEEEEeCCCCC--CCEEEEECCCC--CchhhHHHHHHHHHhC----CCeEEEeCCCCCCCCCCCCCcCCcCHHHHHHH
Confidence 8999999985321 57899999999 9999999999999984 6999999999999999654 47999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcc----cCC-CCchhhhhHHHHh
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIV----FGR-DSSMETRYGLLRG 227 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~----~~~-~~~~~~~~~~~~~ 227 (376)
+.+++++++ .++++||||||||.+|+.+|.++|++|+++|++++... ..+.. ... .........+...
T Consensus 106 l~~ll~~l~------~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (310)
T 1b6g_A 106 LLALIERLD------LRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLM-TDPVTQPAFSAFVTQPADGFTAWKYD 178 (310)
T ss_dssp HHHHHHHHT------CCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCC-CCTTTCTHHHHTTTSSTTTHHHHHHH
T ss_pred HHHHHHHcC------CCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccc-cCCccccchhhhhhccchHHHHHHHH
Confidence 999999997 78899999999999999999999999999999987321 00100 000 0000000000000
Q ss_pred hhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCC----cHHHHH
Q 017180 228 TLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVN----SREEFL 303 (376)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 303 (376)
....+.... ...+. ... ..+.++..+.+...............+......... ......
T Consensus 179 ~~~~~~~~~---------~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T 1b6g_A 179 LVTPSDLRL---------DQFMK----RWA----PTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAI 241 (310)
T ss_dssp HHSCSSCCH---------HHHHH----HHS----TTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHH
T ss_pred hccCchhhh---------hhHHh----hcC----CCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHh
Confidence 000000000 00000 000 012222222221111000000011111000000000 011245
Q ss_pred HHHh-cccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEe--CCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 304 QLFA-DLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEV--PGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 304 ~~~~-~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~--~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
+.+. +| ++|||+|+|++|.+++ +..+.+.+.+|+++++++ +++ |++++ +|++|++.|.+||.+.
T Consensus 242 ~~l~~~i--~~P~Lvi~G~~D~~~~-~~~~~~~~~ip~~~~~~i~~~~~GH~~~~-~p~~~~~~i~~Fl~~~ 309 (310)
T 1b6g_A 242 SFWQNDW--NGQTFMAIGMKDKLLG-PDVMYPMKALINGCPEPLEIADAGHFVQE-FGEQVAREALKHFAET 309 (310)
T ss_dssp HHHHHTC--CSEEEEEEETTCSSSS-HHHHHHHHHHSTTCCCCEEETTCCSCGGG-GHHHHHHHHHHHHHHT
T ss_pred hhhhccc--cCceEEEeccCcchhh-hHHHHHHHhcccccceeeecCCcccchhh-ChHHHHHHHHHHHhcc
Confidence 5677 88 9999999999999999 888889888999998877 998 99999 9999999999999864
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=259.72 Aligned_cols=257 Identities=13% Similarity=0.119 Sum_probs=174.5
Q ss_pred eeEEEEecccCCCCCCCcEEEecCCC-CCccchHhHHHH-HHHHhhhCCcceEEEEeCCCCCcCCCCCCC-CCCHHHHHH
Q 017180 75 INIYYEKHERESPDPSKNILMIPTIS-DVSTVEEWRLVA-QDIVQRVGKVNWRATIVDWPGLGYSDRPKM-DYNADVMEK 151 (376)
Q Consensus 75 ~~l~y~~~g~~~~~~~~~vvllHG~~-~~~~~~~~~~~~-~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~-~~~~~~~~~ 151 (376)
.+++|...|+ +++|||+||++ +.++...|..++ +.|++ +|+||++|+||||.|+.+.. .++++++++
T Consensus 23 ~~l~y~~~G~-----g~~vvllHG~~~~~~~~~~w~~~~~~~L~~-----~~~vi~~D~~G~G~S~~~~~~~~~~~~~a~ 92 (286)
T 2puj_A 23 FNIHYNEAGN-----GETVIMLHGGGPGAGGWSNYYRNVGPFVDA-----GYRVILKDSPGFNKSDAVVMDEQRGLVNAR 92 (286)
T ss_dssp EEEEEEEECC-----SSEEEEECCCSTTCCHHHHHTTTHHHHHHT-----TCEEEEECCTTSTTSCCCCCSSCHHHHHHH
T ss_pred EEEEEEecCC-----CCcEEEECCCCCCCCcHHHHHHHHHHHHhc-----cCEEEEECCCCCCCCCCCCCcCcCHHHHHH
Confidence 8999999985 67899999984 224567899999 99988 79999999999999997654 789999999
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
|+.+++++++ .++++|+||||||.+|+.+|.++|++|+++|+++|........ ... .......... ....
T Consensus 93 dl~~~l~~l~------~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~--~~~-~~~~~~~~~~-~~~~ 162 (286)
T 2puj_A 93 AVKGLMDALD------IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMF--APM-PMEGIKLLFK-LYAE 162 (286)
T ss_dssp HHHHHHHHTT------CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSS--SCS-SCHHHHHHHH-HHHS
T ss_pred HHHHHHHHhC------CCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcc--ccc-chhhHHHHHH-HhhC
Confidence 9999999997 7889999999999999999999999999999999854211000 000 0000111110 0000
Q ss_pred CchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHH-HHhccCCCchhHH-HhhccCCCCCcHHHHHHHHhcc
Q 017180 232 PGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYA-LTKRKGARYVPAA-FLTGLLDPVNSREEFLQLFADL 309 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i 309 (376)
+. ...+...+. ....+....+++....... ....+........ +...... ..+..+.++++
T Consensus 163 ~~------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~i 225 (286)
T 2puj_A 163 PS------------YETLKQMLQ-VFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLS----TWDVTARLGEI 225 (286)
T ss_dssp CC------------HHHHHHHHH-HHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGG----GGCCGGGGGGC
T ss_pred Cc------------HHHHHHHHH-HHhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhcc----ccchhhHHhhc
Confidence 10 111111111 1111122233333333222 1111100000110 1000000 00023456788
Q ss_pred cCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 310 EGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 310 ~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
++|+|+|+|++|.+++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+||++
T Consensus 226 --~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 226 --KAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGAWAQWEHADEFNRLVIDFLRH 285 (286)
T ss_dssp --CSCEEEEEETTCSSSCTHHHHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred --CCCEEEEEECCCCccCHHHHHHHHHHCCCCeEEEeCCCCCCccccCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999998 999999999999999999975
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-36 Score=258.93 Aligned_cols=255 Identities=14% Similarity=0.142 Sum_probs=173.7
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
+|.+++|...|+.++ ++|+|||+||++ ++...|..+++.|++ +|+|+++|+||||.|+.+...++.+++++|
T Consensus 10 ~g~~l~y~~~g~~~~-~~~~vvllHG~~--~~~~~~~~~~~~L~~-----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~d 81 (266)
T 2xua_A 10 NGTELHYRIDGERHG-NAPWIVLSNSLG--TDLSMWAPQVAALSK-----HFRVLRYDTRGHGHSEAPKGPYTIEQLTGD 81 (266)
T ss_dssp SSSEEEEEEESCSSS-CCCEEEEECCTT--CCGGGGGGGHHHHHT-----TSEEEEECCTTSTTSCCCSSCCCHHHHHHH
T ss_pred CCEEEEEEEcCCccC-CCCeEEEecCcc--CCHHHHHHHHHHHhc-----CeEEEEecCCCCCCCCCCCCCCCHHHHHHH
Confidence 488999999986321 157899999999 999999999999987 799999999999999977677999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
+.+++++++ .++++|+||||||.+|+.+|.++|++|+++|++++...... ..............
T Consensus 82 l~~~l~~l~------~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~---------~~~~~~~~~~~~~~- 145 (266)
T 2xua_A 82 VLGLMDTLK------IARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGS---------PEVWVPRAVKARTE- 145 (266)
T ss_dssp HHHHHHHTT------CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSC---------HHHHHHHHHHHHHH-
T ss_pred HHHHHHhcC------CCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCc---------hHHHHHHHHHHHhc-
Confidence 999999997 67899999999999999999999999999999987431100 00000000000000
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCC
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGK 312 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 312 (376)
...... ...+..++..... ...++..+.+....... ....+........... ..+.+.++ +
T Consensus 146 ~~~~~~-------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~l~~i--~ 206 (266)
T 2xua_A 146 GMHALA-------DAVLPRWFTADYM----EREPVVLAMIRDVFVHT-DKEGYASNCEAIDAAD-----LRPEAPGI--K 206 (266)
T ss_dssp CHHHHH-------HHHHHHHSCHHHH----HHCHHHHHHHHHHHHTS-CHHHHHHHHHHHHHCC-----CGGGGGGC--C
T ss_pred ChHHHH-------HHHHHHHcCcccc----cCCHHHHHHHHHHHhhC-CHHHHHHHHHHHhccC-----chhhhccC--C
Confidence 000000 0000000000000 00112222222211111 0011111110000000 23356778 9
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 313 LPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 313 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
+|+|+|+|++|.+++.+..+.+.+..+++++++++ + |+++.|+|+++++.|.+||.+.
T Consensus 207 ~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~ 265 (266)
T 2xua_A 207 VPALVISGTHDLAATPAQGRELAQAIAGARYVELD-ASHISNIERADAFTKTVVDFLTEQ 265 (266)
T ss_dssp SCEEEEEETTCSSSCHHHHHHHHHHSTTCEEEEES-CCSSHHHHTHHHHHHHHHHHHTC-
T ss_pred CCEEEEEcCCCCcCCHHHHHHHHHhCCCCEEEEec-CCCCchhcCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999989999999999 8 9999999999999999999753
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-35 Score=253.99 Aligned_cols=263 Identities=13% Similarity=0.133 Sum_probs=175.0
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
+|.+++|...|+.+ +++|||+||++ .+...|..+++.|.+. ||+|+++|+||||.|+.+...++++++++|
T Consensus 7 ~g~~l~y~~~g~~~---~~~vvllHG~~--~~~~~w~~~~~~l~~~----g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d 77 (275)
T 1a88_A 7 DGTNIFYKDWGPRD---GLPVVFHHGWP--LSADDWDNQMLFFLSH----GYRVIAHDRRGHGRSDQPSTGHDMDTYAAD 77 (275)
T ss_dssp TSCEEEEEEESCTT---SCEEEEECCTT--CCGGGGHHHHHHHHHT----TCEEEEECCTTSTTSCCCSSCCSHHHHHHH
T ss_pred CCCEEEEEEcCCCC---CceEEEECCCC--CchhhHHHHHHHHHHC----CceEEEEcCCcCCCCCCCCCCCCHHHHHHH
Confidence 58899999998643 78899999999 9999999999999985 899999999999999977677999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhC-CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN-LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~-p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
+.+++++++ .++++|+||||||.+++.++.++ |++|+++|++++.................. ....+.
T Consensus 78 l~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~---~~~~~~-- 146 (275)
T 1a88_A 78 VAALTEALD------LRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLE---VFDEFR-- 146 (275)
T ss_dssp HHHHHHHHT------CCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHH---HHHHHH--
T ss_pred HHHHHHHcC------CCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHH---HHHHHH--
Confidence 999999997 67899999999999999988876 999999999987421100000000000000 000000
Q ss_pred CchhhHHhhhhhccHHHHHHHHHhcccC---CCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 232 PGVGWMMYNMLVSNEKAIQSQYKSHVYS---NPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
..... .....+........+. .....+++..+.+......... ......+....... ..+.+.+
T Consensus 147 ----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~l~~ 213 (275)
T 1a88_A 147 ----AALAA---NRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAA-NAHYECIAAFSETD-----FTDDLKR 213 (275)
T ss_dssp ----HHHHH---CHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCH-HHHHHHHHHHHHCC-----CHHHHHH
T ss_pred ----HHHhh---hHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcch-HhHHHHHhhhhhcc-----ccccccc
Confidence 00000 0011111111101111 0112334444433322211111 11111111000001 2345677
Q ss_pred ccCCCcEEEEEeCCCCCCCHH-HHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 309 LEGKLPLLVVSTEGSPRRSKA-EMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+ ++|+|+|+|++|.+++.+ ..+.+.+..+++++++++++ |++++|+|+++++.|.+||++
T Consensus 214 i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 275 (275)
T 1a88_A 214 I--DVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp C--CSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred C--CCCEEEEecCCCccCCcHHHHHHHHhhCCCcEEEEcCCCCccHHHhCHHHHHHHHHHHhhC
Confidence 8 999999999999999877 45556677889999999998 999999999999999999963
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-37 Score=268.07 Aligned_cols=255 Identities=14% Similarity=0.113 Sum_probs=171.6
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccch-HhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC-CCC--CCCHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVE-EWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR-PKM--DYNAD 147 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~-~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~-~~~--~~~~~ 147 (376)
.+|.+++|...|+++ +|+|||+||++ ++.. .|..+++.|++ +|+||++|+||||.|+. +.. .++++
T Consensus 10 ~~g~~l~~~~~G~~~---~~~vvllHG~~--~~~~~~w~~~~~~L~~-----~~~vi~~Dl~G~G~S~~~~~~~~~~~~~ 79 (286)
T 2yys_A 10 VGEAELYVEDVGPVE---GPALFVLHGGP--GGNAYVLREGLQDYLE-----GFRVVYFDQRGSGRSLELPQDPRLFTVD 79 (286)
T ss_dssp CSSCEEEEEEESCTT---SCEEEEECCTT--TCCSHHHHHHHGGGCT-----TSEEEEECCTTSTTSCCCCSCGGGCCHH
T ss_pred ECCEEEEEEeecCCC---CCEEEEECCCC--CcchhHHHHHHHHhcC-----CCEEEEECCCCCCCCCCCccCcccCcHH
Confidence 348899999998643 78999999999 9999 89999999976 89999999999999997 655 79999
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHh
Q 017180 148 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRG 227 (376)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (376)
++++|+.+++++++ .++++|+||||||.+|+.+|.++|+ |+++|+++|.. ..+ .........
T Consensus 80 ~~a~dl~~ll~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~--~~~---------~~~~~~~~~ 141 (286)
T 2yys_A 80 ALVEDTLLLAEALG------VERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWV--NFP---------WLAARLAEA 141 (286)
T ss_dssp HHHHHHHHHHHHTT------CCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCC--BHH---------HHHHHHHHH
T ss_pred HHHHHHHHHHHHhC------CCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCcc--CcH---------HHHHHHHHH
Confidence 99999999999997 6789999999999999999999999 99999999842 000 000000000
Q ss_pred h--hccCchhhHHhhhh--hccHHHHHHHHHhcccCCCCCCChH-HHHHHHHHHhccCCCchhHH--HhhccCCCCCcHH
Q 017180 228 T--LRAPGVGWMMYNML--VSNEKAIQSQYKSHVYSNPDNVTPG-IVESRYALTKRKGARYVPAA--FLTGLLDPVNSRE 300 (376)
Q Consensus 228 ~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 300 (376)
. .........+.... ......++... .+. ... .................... .........
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 209 (286)
T 2yys_A 142 AGLAPLPDPEENLKEALKREEPKALFDRLM---FPT-----PRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLD---- 209 (286)
T ss_dssp TTCCCCSCHHHHHHHHHHHSCHHHHHHHHH---CSS-----HHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCB----
T ss_pred hccccchhHHHHHHHHhccCChHHHHHhhh---ccC-----CccccChHHHHHHHhhccccccchhhcccccccCC----
Confidence 0 00000000000000 00011111111 110 000 00001111111100010111 111111111
Q ss_pred HHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 301 ~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
..+.++++ ++|+|+|+|++|.+++.+ .+.+.+ .+++++++++++ |++++|+|+++++.|.+||.+.
T Consensus 210 -~~~~l~~i--~~P~lvi~G~~D~~~~~~-~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 210 -YTPYLTPE--RRPLYVLVGERDGTSYPY-AEEVAS-RLRAPIRVLPEAGHYLWIDAPEAFEEAFKEALAAL 276 (286)
T ss_dssp -CGGGCCCC--SSCEEEEEETTCTTTTTT-HHHHHH-HHTCCEEEETTCCSSHHHHCHHHHHHHHHHHHHTT
T ss_pred -hhhhhhhc--CCCEEEEEeCCCCcCCHh-HHHHHh-CCCCCEEEeCCCCCCcChhhHHHHHHHHHHHHHhh
Confidence 23356777 999999999999999988 888988 999999999998 9999999999999999999875
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-36 Score=262.77 Aligned_cols=253 Identities=12% Similarity=0.065 Sum_probs=170.2
Q ss_pred eeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHHHH
Q 017180 75 INIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKF 152 (376)
Q Consensus 75 ~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~~~ 152 (376)
.+++|...|+++. +++|||+||++ ++...|+.+++.|++. ||+||++|+||||.|+.+. ..|+.+++++|
T Consensus 33 ~~l~y~~~G~~~~--g~~vvllHG~~--~~~~~w~~~~~~L~~~----g~rvia~Dl~G~G~S~~~~~~~~~~~~~~a~d 104 (297)
T 2xt0_A 33 LRMHYVDEGPRDA--EHTFLCLHGEP--SWSFLYRKMLPVFTAA----GGRVVAPDLFGFGRSDKPTDDAVYTFGFHRRS 104 (297)
T ss_dssp CCEEEEEESCTTC--SCEEEEECCTT--CCGGGGTTTHHHHHHT----TCEEEEECCTTSTTSCEESCGGGCCHHHHHHH
T ss_pred eEEEEEEccCCCC--CCeEEEECCCC--CcceeHHHHHHHHHhC----CcEEEEeCCCCCCCCCCCCCcccCCHHHHHHH
Confidence 8999999985321 57899999999 9999999999999985 7999999999999999654 37999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
+.+++++++ .++++||||||||.+|+.+|.++|++|+++|++++.. .. .... ......+.......+
T Consensus 105 l~~ll~~l~------~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~-~~-----~~~~-~~~~~~~~~~~~~~~ 171 (297)
T 2xt0_A 105 LLAFLDALQ------LERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTAL-AV-----GLSP-GKGFESWRDFVANSP 171 (297)
T ss_dssp HHHHHHHHT------CCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCC-CS-----SSCS-CHHHHHHHHHHHTCT
T ss_pred HHHHHHHhC------CCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCC-Cc-----ccCC-chhHHHHHHHhhccc
Confidence 999999997 6889999999999999999999999999999998742 10 0000 000000100000001
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccC---CCC--CcHHHHHHHHh
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLL---DPV--NSREEFLQLFA 307 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~ 307 (376)
.... ...+. ... ....++..+.+...............+..... ... .......+.+.
T Consensus 172 ~~~~---------~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 234 (297)
T 2xt0_A 172 DLDV---------GKLMQ----RAI----PGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWS 234 (297)
T ss_dssp TCCH---------HHHHH----HHS----TTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHH
T ss_pred ccch---------hHHHh----ccC----ccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhh
Confidence 0000 00000 000 12223322222211100000111111111100 000 00122455677
Q ss_pred -cccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEE--eCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 308 -DLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVE--VPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 308 -~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~--~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
++ ++|+|+|+|++|.+++ +..+.+.+..|++++++ ++++ |++++ +|++|++.|.+||.
T Consensus 235 ~~i--~~P~Lvi~G~~D~~~~-~~~~~~~~~~p~~~~~~~~~~~~GH~~~~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 235 TQW--SGPTFMAVGAQDPVLG-PEVMGMLRQAIRGCPEPMIVEAGGHFVQE-HGEPIARAALAAFG 296 (297)
T ss_dssp HTC--CSCEEEEEETTCSSSS-HHHHHHHHHHSTTCCCCEEETTCCSSGGG-GCHHHHHHHHHHTT
T ss_pred hcc--CCCeEEEEeCCCcccC-hHHHHHHHhCCCCeeEEeccCCCCcCccc-CHHHHHHHHHHHHh
Confidence 88 9999999999999999 88888888888887654 7888 99999 99999999999985
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-35 Score=253.05 Aligned_cols=261 Identities=13% Similarity=0.146 Sum_probs=174.2
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
+|.+++|...|. +++|||+||++ .+...|..+++.|.+. ||+|+++|+||||.|+.+...++.+++++|
T Consensus 7 ~g~~l~y~~~g~-----~~~vvllHG~~--~~~~~~~~~~~~L~~~----g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d 75 (273)
T 1a8s_A 7 DGTQIYYKDWGS-----GQPIVFSHGWP--LNADSWESQMIFLAAQ----GYRVIAHDRRGHGRSSQPWSGNDMDTYADD 75 (273)
T ss_dssp TSCEEEEEEESC-----SSEEEEECCTT--CCGGGGHHHHHHHHHT----TCEEEEECCTTSTTSCCCSSCCSHHHHHHH
T ss_pred CCcEEEEEEcCC-----CCEEEEECCCC--CcHHHHhhHHhhHhhC----CcEEEEECCCCCCCCCCCCCCCCHHHHHHH
Confidence 588999999984 77899999999 9999999999999986 899999999999999977677999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhC-CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN-LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~-p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
+.+++++++ .++++|+||||||.+++.++.++ |++|+++|++++................. .....+.
T Consensus 76 l~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~---~~~~~~~-- 144 (273)
T 1a8s_A 76 LAQLIEHLD------LRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPM---EVFDGIR-- 144 (273)
T ss_dssp HHHHHHHTT------CCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCH---HHHHHHH--
T ss_pred HHHHHHHhC------CCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcH---HHHHHHH--
Confidence 999999997 67899999999999999977765 99999999998642110000000000000 0000000
Q ss_pred CchhhHHhhhhhccHHHHHHHHHhcccC---CCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 232 PGVGWMMYNMLVSNEKAIQSQYKSHVYS---NPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
..... .....+........+. ......++..+.+......... .............. ..+.+++
T Consensus 145 ----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~l~~ 211 (273)
T 1a8s_A 145 ----QASLA---DRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGH-KNAYDCIKAFSETD-----FTEDLKK 211 (273)
T ss_dssp ----HHHHH---HHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCH-HHHHHHHHHHHHCC-----CHHHHHT
T ss_pred ----HHhHh---hHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccch-hHHHHHHHHHhccC-----hhhhhhc
Confidence 00000 0011122111101111 0112334444433322111111 11111111000001 3446778
Q ss_pred ccCCCcEEEEEeCCCCCCCHH-HHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 309 LEGKLPLLVVSTEGSPRRSKA-EMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+ ++|+|+|+|++|.+++.+ ..+.+.+..+++++++++++ |++++|+|+++++.|.+||++
T Consensus 212 i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (273)
T 1a8s_A 212 I--DVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIKG 273 (273)
T ss_dssp C--CSCEEEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHHHHHC
T ss_pred C--CCCEEEEECCCCccCChHHHHHHHHHhCCCcEEEEeCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 8 999999999999999877 45566677889999999998 999999999999999999963
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-36 Score=262.11 Aligned_cols=266 Identities=12% Similarity=0.109 Sum_probs=177.6
Q ss_pred CCc-eeEEEEecccCCCCCCCcEEEecCCC-CCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC-CCCHHH
Q 017180 72 ENS-INIYYEKHERESPDPSKNILMIPTIS-DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM-DYNADV 148 (376)
Q Consensus 72 ~~g-~~l~y~~~g~~~~~~~~~vvllHG~~-~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~-~~~~~~ 148 (376)
.+| .+++|...|++. +|+|||+||++ +..+...|..+++.|++ +|+||++|+||||.|+.+.. .++.++
T Consensus 20 ~~g~~~l~y~~~G~g~---~~~vvllHG~~pg~~~~~~w~~~~~~L~~-----~~~via~Dl~G~G~S~~~~~~~~~~~~ 91 (291)
T 2wue_A 20 VDGPLKLHYHEAGVGN---DQTVVLLHGGGPGAASWTNFSRNIAVLAR-----HFHVLAVDQPGYGHSDKRAEHGQFNRY 91 (291)
T ss_dssp SSSEEEEEEEEECTTC---SSEEEEECCCCTTCCHHHHTTTTHHHHTT-----TSEEEEECCTTSTTSCCCSCCSSHHHH
T ss_pred eCCcEEEEEEecCCCC---CCcEEEECCCCCccchHHHHHHHHHHHHh-----cCEEEEECCCCCCCCCCCCCCCcCHHH
Confidence 358 899999998632 35899999984 33456789999999988 79999999999999996654 789999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
+++|+.+++++++ .++++|+||||||.+|+.+|.++|++|+++|+++|........ .. ........... .
T Consensus 92 ~a~dl~~~l~~l~------~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~--~~-~~~~~~~~~~~-~ 161 (291)
T 2wue_A 92 AAMALKGLFDQLG------LGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLF--AP-DPTEGVKRLSK-F 161 (291)
T ss_dssp HHHHHHHHHHHHT------CCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSS--SC-SSCHHHHHHHH-H
T ss_pred HHHHHHHHHHHhC------CCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCcccc--cc-ccchhhHHHHH-H
Confidence 9999999999997 6789999999999999999999999999999999854211000 00 00000000100 0
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
...+ ....+...+. ....++...+++...........+..............+.........+.+++
T Consensus 162 ~~~~------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 228 (291)
T 2wue_A 162 SVAP------------TRENLEAFLR-VMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYR 228 (291)
T ss_dssp HHSC------------CHHHHHHHHH-TSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGG
T ss_pred hccC------------CHHHHHHHHH-HhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhh
Confidence 0000 0111221111 22222222334444333322211110000100000000000000001145677
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+ ++|+|+|+|++|.+++.+..+.+.+..|++++++++++ |++++|+|+++++.|.+||++
T Consensus 229 i--~~P~lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 229 L--RQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGG 289 (291)
T ss_dssp C--CSCEEEEEETTCSSSCGGGGHHHHHHSTTEEEEEESSCCSCHHHHTHHHHHHHHHHHTTC
T ss_pred C--CCCeEEEecCCCCCCCHHHHHHHHHHCCCCeEEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 8 99999999999999999988889888999999999998 999999999999999999975
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=257.31 Aligned_cols=257 Identities=11% Similarity=0.117 Sum_probs=173.1
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC-CCCHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM-DYNADVMEKF 152 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~-~~~~~~~~~~ 152 (376)
+.+++|...|+ +++|||+||++ ++...|..+++.|++ +|+|+++|+||||.|+.+.. .++.+++++|
T Consensus 5 ~~~~~y~~~G~-----g~~vvllHG~~--~~~~~~~~~~~~L~~-----~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~d 72 (269)
T 2xmz_A 5 HYKFYEANVET-----NQVLVFLHGFL--SDSRTYHNHIEKFTD-----NYHVITIDLPGHGEDQSSMDETWNFDYITTL 72 (269)
T ss_dssp SEEEECCSSCC-----SEEEEEECCTT--CCGGGGTTTHHHHHT-----TSEEEEECCTTSTTCCCCTTSCCCHHHHHHH
T ss_pred cceEEEEEcCC-----CCeEEEEcCCC--CcHHHHHHHHHHHhh-----cCeEEEecCCCCCCCCCCCCCccCHHHHHHH
Confidence 67899999886 56899999999 999999999999998 79999999999999997655 7899999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
+.+++++++ .++++|+||||||.+|+.+|.++|++|+++|++++... .+ ......... ....
T Consensus 73 l~~~l~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~--~~------~~~~~~~~~----~~~~ 134 (269)
T 2xmz_A 73 LDRILDKYK------DKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPG--IK------EEANQLERR----LVDD 134 (269)
T ss_dssp HHHHHGGGT------TSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSC--CS------SHHHHHHHH----HHHH
T ss_pred HHHHHHHcC------CCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcc--cC------CchhHHHHh----hhhh
Confidence 999999997 78899999999999999999999999999999987421 00 000000000 0000
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhc---cCCCCCcHHHHHHHHhcc
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTG---LLDPVNSREEFLQLFADL 309 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i 309 (376)
.....+... .....+..+.....+......+++..+.+........ .......+.. ..... +.+.++++
T Consensus 135 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~l~~i 206 (269)
T 2xmz_A 135 ARAKVLDIA--GIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQS-PHKMAKALRDYGTGQMPN-----LWPRLKEI 206 (269)
T ss_dssp HHHHHHHHH--CHHHHHHHHTTSGGGGGGGGSCHHHHHHHHHHHHTSC-HHHHHHHHHHHSTTTSCC-----CGGGGGGC
T ss_pred HHHHhhccc--cHHHHHHHHHhCccccccccCCHHHHHHHHHHHhccC-cHHHHHHHHHHHhccCcc-----HHHHHHhc
Confidence 000000000 0011111111110111000122333322222111111 1111111111 11111 23457788
Q ss_pred cCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 310 EGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 310 ~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
++|+|+|+|++|.+++.+..+ +.+..+++++++++++ |++++|+|+++++.|.+||++.
T Consensus 207 --~~P~lii~G~~D~~~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 207 --KVPTLILAGEYDEKFVQIAKK-MANLIPNSKCKLISATGHTIHVEDSDEFDTMILGFLKEE 266 (269)
T ss_dssp --CSCEEEEEETTCHHHHHHHHH-HHHHSTTEEEEEETTCCSCHHHHSHHHHHHHHHHHHHHH
T ss_pred --CCCEEEEEeCCCcccCHHHHH-HHhhCCCcEEEEeCCCCCChhhcCHHHHHHHHHHHHHHh
Confidence 999999999999998887755 7788899999999998 9999999999999999999875
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=251.74 Aligned_cols=260 Identities=12% Similarity=0.120 Sum_probs=173.4
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
+|.+++|...|. +++|||+||++ .+...|..+++.|.+. ||+|+++|+||||.|+.+...++.+++++|
T Consensus 7 ~g~~l~y~~~g~-----g~~vvllHG~~--~~~~~w~~~~~~l~~~----g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d 75 (274)
T 1a8q_A 7 DGVEIFYKDWGQ-----GRPVVFIHGWP--LNGDAWQDQLKAVVDA----GYRGIAHDRRGHGHSTPVWDGYDFDTFADD 75 (274)
T ss_dssp TSCEEEEEEECS-----SSEEEEECCTT--CCGGGGHHHHHHHHHT----TCEEEEECCTTSTTSCCCSSCCSHHHHHHH
T ss_pred CCCEEEEEecCC-----CceEEEECCCc--chHHHHHHHHHHHHhC----CCeEEEEcCCCCCCCCCCCCCCcHHHHHHH
Confidence 588999999984 67899999999 9999999999999885 899999999999999977677999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhC-CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN-LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~-p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
+.+++++++ .++++|+||||||.+++.+|.++ |++|+++|++++.................. ....+.
T Consensus 76 l~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~---~~~~~~-- 144 (274)
T 1a8q_A 76 LNDLLTDLD------LRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDE---VFDALK-- 144 (274)
T ss_dssp HHHHHHHTT------CCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHH---HHHHHH--
T ss_pred HHHHHHHcC------CCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHH---HHHHHH--
Confidence 999999997 67899999999999999988765 999999999987421100000000000000 000000
Q ss_pred CchhhHHhhhhhccHHHHHHHHHhcccC---CCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 232 PGVGWMMYNMLVSNEKAIQSQYKSHVYS---NPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
..... ........... ..+. ......++..+.+........ ............... ..+.+.+
T Consensus 145 ----~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~l~~ 210 (274)
T 1a8q_A 145 ----NGVLT---ERSQFWKDTAE-GFFSANRPGNKVTQGNKDAFWYMAMAQT-IEGGVRCVDAFGYTD-----FTEDLKK 210 (274)
T ss_dssp ----HHHHH---HHHHHHHHHHH-HHTTTTSTTCCCCHHHHHHHHHHHTTSC-HHHHHHHHHHHHHCC-----CHHHHTT
T ss_pred ----HHhhc---cHHHHHHHhcc-cccccccccccccHHHHHHHHHHhhhcC-hHHHHHHHhhhhcCc-----HHHHhhc
Confidence 00000 00011111110 1111 011234444443332221111 111111111000001 3456778
Q ss_pred ccCCCcEEEEEeCCCCCCCHH-HHHHHhcccCCceEEEeCCC-CCCCCC--ChHHHHHHHHHHHHh
Q 017180 309 LEGKLPLLVVSTEGSPRRSKA-EMEALKGAKGVTKFVEVPGA-LLPQEE--YPAMVAQELYQFLQQ 370 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~-H~~~~e--~pe~~~~~i~~fl~~ 370 (376)
+ ++|+|+|+|++|.+++.+ ..+.+.+..+++++++++++ |++++| +|+++++.|.+||++
T Consensus 211 i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~~ 274 (274)
T 1a8q_A 211 F--DIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp C--CSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred C--CCCEEEEecCcCCCCCcHHHHHHHHhhCCCceEEEECCCCCceecccCCHHHHHHHHHHHhcC
Confidence 8 999999999999999987 45566677899999999998 999999 999999999999963
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-36 Score=263.13 Aligned_cols=277 Identities=13% Similarity=0.147 Sum_probs=187.7
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
+|.+++|...|+ +|+|||+||++ ++...|..+++.|.+ .|+|+++|+||||.|+.+...++.+++++|
T Consensus 18 ~g~~l~~~~~g~-----~~~vv~lHG~~--~~~~~~~~~~~~L~~-----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 85 (301)
T 3kda_A 18 DGVKLHYVKGGQ-----GPLVMLVHGFG--QTWYEWHQLMPELAK-----RFTVIAPDLPGLGQSEPPKTGYSGEQVAVY 85 (301)
T ss_dssp TTEEEEEEEEES-----SSEEEEECCTT--CCGGGGTTTHHHHTT-----TSEEEEECCTTSTTCCCCSSCSSHHHHHHH
T ss_pred CCeEEEEEEcCC-----CCEEEEECCCC--cchhHHHHHHHHHHh-----cCeEEEEcCCCCCCCCCCCCCccHHHHHHH
Confidence 489999999994 78999999999 999999999999998 699999999999999977788999999999
Q ss_pred HHHHHhCCCCCCCCCCCc-EEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 153 VVDLINAPDSPVSSSESD-LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
+.+++++++ .++ ++|+||||||.+++.+|.++|++|+++|+++|.....................+.......
T Consensus 86 l~~~l~~l~------~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (301)
T 3kda_A 86 LHKLARQFS------PDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAA 159 (301)
T ss_dssp HHHHHHHHC------SSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHHHHHHC
T ss_pred HHHHHHHcC------CCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhHHHhhc
Confidence 999999997 555 9999999999999999999999999999999853211110000000000000001111111
Q ss_pred -CchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhccc
Q 017180 232 -PGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLE 310 (376)
Q Consensus 232 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 310 (376)
+.....+... .....+.. +......+....+++..+.+...............++................++++
T Consensus 160 ~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i- 235 (301)
T 3kda_A 160 DDRLAETLIAG--KERFFLEH-FIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQM- 235 (301)
T ss_dssp STTHHHHHHTT--CHHHHHHH-HHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHHHTTSCBCS-
T ss_pred CcchHHHHhcc--chHHHHHH-HHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccchhhcccchhhcccc-
Confidence 2122221111 11222332 333334344456666666665554433221112222111100000000011112267
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcCC
Q 017180 311 GKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFEP 374 (376)
Q Consensus 311 ~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~~ 374 (376)
++|+|+|+|++| ++....+.+.+..+++++++++++ |++++|+|+++++.|.+|+++....
T Consensus 236 -~~P~l~i~G~~D--~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~~~~ 297 (301)
T 3kda_A 236 -PTMTLAGGGAGG--MGTFQLEQMKAYAEDVEGHVLPGCGHWLPEECAAPMNRLVIDFLSRGRHH 297 (301)
T ss_dssp -CEEEEEECSTTS--CTTHHHHHHHTTBSSEEEEEETTCCSCHHHHTHHHHHHHHHHHHTTSCCC
T ss_pred -CcceEEEecCCC--CChhHHHHHHhhcccCeEEEcCCCCcCchhhCHHHHHHHHHHHHhhCchh
Confidence 999999999999 777888888889999999999998 9999999999999999999987544
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=252.48 Aligned_cols=266 Identities=14% Similarity=0.150 Sum_probs=176.5
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
+|.+++|...|+ +++|||+||++ .+...|..+++.|.+. ||+|+++|+||||.|+.+...++.+++++|
T Consensus 11 ~g~~l~y~~~g~-----~~pvvllHG~~--~~~~~~~~~~~~L~~~----g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d 79 (279)
T 1hkh_A 11 TPIELYYEDQGS-----GQPVVLIHGYP--LDGHSWERQTRELLAQ----GYRVITYDRRGFGGSSKVNTGYDYDTFAAD 79 (279)
T ss_dssp EEEEEEEEEESS-----SEEEEEECCTT--CCGGGGHHHHHHHHHT----TEEEEEECCTTSTTSCCCSSCCSHHHHHHH
T ss_pred CCeEEEEEecCC-----CCcEEEEcCCC--chhhHHhhhHHHHHhC----CcEEEEeCCCCCCCCCCCCCCCCHHHHHHH
Confidence 488999999885 66799999999 9999999999999886 899999999999999977778999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCC-CcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV-KPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
+.+++++++ .++++|+||||||.+++.+|.++|+ +|+++|++++......................+......
T Consensus 80 l~~~l~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (279)
T 1hkh_A 80 LHTVLETLD------LRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKG 153 (279)
T ss_dssp HHHHHHHHT------CCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHH
T ss_pred HHHHHHhcC------CCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhh
Confidence 999999997 6789999999999999999999998 999999998732110000000000000000000000000
Q ss_pred CchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccC
Q 017180 232 PGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEG 311 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 311 (376)
. . .... ......++..... .....+++..+.+........... ........ ... ..+ ....+...
T Consensus 154 ~--~---~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~-~~~-~l~~i~~~-- 218 (279)
T 1hkh_A 154 D--R---FAWF---TDFYKNFYNLDEN-LGSRISEQAVTGSWNVAIGSAPVA-AYAVVPAW-IED-FRS-DVEAVRAA-- 218 (279)
T ss_dssp C--H---HHHH---HHHHHHHHTHHHH-BTTTBCHHHHHHHHHHHHTSCTTH-HHHTHHHH-TCB-CHH-HHHHHHHH--
T ss_pred h--h---hhhH---HHHHhhhhhcccC-CcccccHHHHHhhhhhhccCcHHH-HHHHHHHH-hhc-hhh-hHHHhccC--
Confidence 0 0 0000 0011111110000 012344555554444333322221 11111111 111 111 12223333
Q ss_pred CCcEEEEEeCCCCCCCHHHH-HHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 312 KLPLLVVSTEGSPRRSKAEM-EALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
++|+|+|+|++|.+++.+.. +.+.+..+++++++++++ |++++|+|+++++.|.+||++
T Consensus 219 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 279 (279)
T 1hkh_A 219 GKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp CCCEEEEEETTCSSSCTTTTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred CCCEEEEEcCCCccCChHHHHHHHHHhCCCeeEEEeCCCCccchhcCHHHHHHHHHHHhhC
Confidence 78999999999999998776 788888899999999998 999999999999999999963
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=253.06 Aligned_cols=258 Identities=13% Similarity=0.113 Sum_probs=175.1
Q ss_pred CCceeEEEEecccCCCCCCCc-EEEecCCC-CCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC-CCCHHH
Q 017180 72 ENSINIYYEKHERESPDPSKN-ILMIPTIS-DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM-DYNADV 148 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~-vvllHG~~-~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~-~~~~~~ 148 (376)
.+|.+++|...|+. +++ |||+||++ +.++...|..+++.|++ +|+|+++|+||||.|+.+.. .++.++
T Consensus 14 ~~g~~l~y~~~g~~----g~p~vvllHG~~~~~~~~~~~~~~~~~L~~-----~~~vi~~D~~G~G~S~~~~~~~~~~~~ 84 (285)
T 1c4x_A 14 SGTLASHALVAGDP----QSPAVVLLHGAGPGAHAASNWRPIIPDLAE-----NFFVVAPDLIGFGQSEYPETYPGHIMS 84 (285)
T ss_dssp CTTSCEEEEEESCT----TSCEEEEECCCSTTCCHHHHHGGGHHHHHT-----TSEEEEECCTTSTTSCCCSSCCSSHHH
T ss_pred ECCEEEEEEecCCC----CCCEEEEEeCCCCCCcchhhHHHHHHHHhh-----CcEEEEecCCCCCCCCCCCCcccchhh
Confidence 34889999998842 455 99999985 22456789999999988 79999999999999986554 689999
Q ss_pred H----HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHH
Q 017180 149 M----EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGL 224 (376)
Q Consensus 149 ~----~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (376)
+ ++|+.+++++++ .++++|+||||||.+++.+|.++|++|+++|+++|....... . .... ..
T Consensus 85 ~~~~~~~dl~~~l~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~--~-----~~~~-~~ 150 (285)
T 1c4x_A 85 WVGMRVEQILGLMNHFG------IEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNA--R-----PPEL-AR 150 (285)
T ss_dssp HHHHHHHHHHHHHHHHT------CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSS--C-----CHHH-HH
T ss_pred hhhhHHHHHHHHHHHhC------CCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCc--c-----chhH-HH
Confidence 9 999999999997 678999999999999999999999999999999985321100 0 0000 00
Q ss_pred HHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCC--ChHHHHHHHHHHhccCCCchhHHHh---hccCCCCCcH
Q 017180 225 LRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNV--TPGIVESRYALTKRKGARYVPAAFL---TGLLDPVNSR 299 (376)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 299 (376)
.......+ ....++..+. ....++... .++...........+.......... ...... .
T Consensus 151 ~~~~~~~~------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 214 (285)
T 1c4x_A 151 LLAFYADP------------RLTPYRELIH-SFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMES---L 214 (285)
T ss_dssp HHTGGGSC------------CHHHHHHHHH-TTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGG---G
T ss_pred HHHHhccc------------cHHHHHHHHH-HhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccc---c
Confidence 00011000 0111221121 222222222 2333332222111111000111111 000000 0
Q ss_pred HHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 300 EEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 300 ~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
....+.+.++ ++|+|+|+|++|.+++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+||.+
T Consensus 215 ~~~~~~l~~i--~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 215 VIPPATLGRL--PHDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 284 (285)
T ss_dssp CCCHHHHTTC--CSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred ccchhhhccC--CCCEEEEEeCCCeeeCHHHHHHHHHhCCCceEEEeCCCCcchhhcCHHHHHHHHHHHHhc
Confidence 0023457788 99999999999999999999999888999999999998 999999999999999999975
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-34 Score=250.12 Aligned_cols=265 Identities=12% Similarity=0.115 Sum_probs=174.8
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHH-HHHHHhhhCCcceEEEEeCCCCCcCCCC--C-CCCCCHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLV-AQDIVQRVGKVNWRATIVDWPGLGYSDR--P-KMDYNADV 148 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~-~~~L~~~~~~~~~~Vi~~D~~G~G~S~~--~-~~~~~~~~ 148 (376)
+|.+++|...|+++ +|+|||+||++ .+...|..+ ++.|++. ||+||++|+||||.|+. + ...+++++
T Consensus 9 ~g~~l~y~~~G~~~---~~~vvllHG~~--~~~~~w~~~~~~~L~~~----G~~vi~~D~rG~G~S~~~~~~~~~~~~~~ 79 (298)
T 1q0r_A 9 GDVELWSDDFGDPA---DPALLLVMGGN--LSALGWPDEFARRLADG----GLHVIRYDHRDTGRSTTRDFAAHPYGFGE 79 (298)
T ss_dssp TTEEEEEEEESCTT---SCEEEEECCTT--CCGGGSCHHHHHHHHTT----TCEEEEECCTTSTTSCCCCTTTSCCCHHH
T ss_pred CCeEEEEEeccCCC---CCeEEEEcCCC--CCccchHHHHHHHHHhC----CCEEEeeCCCCCCCCCCCCCCcCCcCHHH
Confidence 48999999998543 78999999999 999999874 4899885 79999999999999986 3 34699999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCC-CC----------ccc-CCCC
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGP-LP----------IVF-GRDS 216 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~-~~----------~~~-~~~~ 216 (376)
+++|+.+++++++ .++++|+||||||.+|+.+|.++|++|+++|++++..... .+ ... ....
T Consensus 80 ~a~dl~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (298)
T 1q0r_A 80 LAADAVAVLDGWG------VDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPG 153 (298)
T ss_dssp HHHHHHHHHHHTT------CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCC
T ss_pred HHHHHHHHHHHhC------CCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhccccc
Confidence 9999999999997 7889999999999999999999999999999998743110 00 000 0000
Q ss_pred chhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHH--hcccCCCCCCChHHHHHHHHHH-hccCCCchh-HHHhhcc
Q 017180 217 SMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYK--SHVYSNPDNVTPGIVESRYALT-KRKGARYVP-AAFLTGL 292 (376)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~ 292 (376)
.. ...+......+.. .......+..... ..........+++....+.... ......... ...+...
T Consensus 154 ~~---~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (298)
T 1q0r_A 154 PQ---QPFLDALALMNQP-------AEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLT 223 (298)
T ss_dssp CC---HHHHHHHHHHHSC-------CCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCC
T ss_pred cc---HHHHHHHhccCcc-------cccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhhhhhh
Confidence 00 0000001000000 0000111111100 0000001123444333332221 111011111 1111111
Q ss_pred CCCCCcHHHHHHH-HhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 293 LDPVNSREEFLQL-FADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 293 ~~~~~~~~~~~~~-~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
... +..+. ++++ ++|+|+|+|++|.+++.+..+.+.+..|++++++++++ | |.|+++++.|.+||.+
T Consensus 224 ~~~-----~~~~~~l~~i--~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH----e~p~~~~~~i~~fl~~ 292 (298)
T 1q0r_A 224 LPP-----PSRAAELREV--TVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGH----ALPSSVHGPLAEVILA 292 (298)
T ss_dssp CCC-----GGGGGGGGGC--CSCEEEEEETTCSSSCTTHHHHHHHTSTTEEEEEETTCCS----SCCGGGHHHHHHHHHH
T ss_pred cCc-----cccccccccc--CCCEEEEEeCCCccCCHHHHHHHHHhCCCCEEEEcCCCCC----CCcHHHHHHHHHHHHH
Confidence 111 13445 7888 99999999999999999999999999999999999998 9 8899999999999987
Q ss_pred hcC
Q 017180 371 TFE 373 (376)
Q Consensus 371 ~~~ 373 (376)
...
T Consensus 293 ~~~ 295 (298)
T 1q0r_A 293 HTR 295 (298)
T ss_dssp HHH
T ss_pred Hhh
Confidence 643
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=252.72 Aligned_cols=254 Identities=14% Similarity=0.156 Sum_probs=174.9
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCC-CCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC-CCCHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTIS-DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM-DYNADVME 150 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~-~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~-~~~~~~~~ 150 (376)
+|.+++|...|+ +++|||+||++ +..+...|..+++.|.+ +|+|+++|+||||.|+ +.. .++.++++
T Consensus 24 ~g~~l~y~~~g~-----g~~vvllHG~~~~~~~~~~~~~~~~~L~~-----~~~vi~~Dl~G~G~S~-~~~~~~~~~~~~ 92 (296)
T 1j1i_A 24 GGVETRYLEAGK-----GQPVILIHGGGAGAESEGNWRNVIPILAR-----HYRVIAMDMLGFGKTA-KPDIEYTQDRRI 92 (296)
T ss_dssp TTEEEEEEEECC-----SSEEEEECCCSTTCCHHHHHTTTHHHHTT-----TSEEEEECCTTSTTSC-CCSSCCCHHHHH
T ss_pred CCEEEEEEecCC-----CCeEEEECCCCCCcchHHHHHHHHHHHhh-----cCEEEEECCCCCCCCC-CCCCCCCHHHHH
Confidence 489999999885 67899999985 22456789999999988 7999999999999999 544 78999999
Q ss_pred HHHHHHHhCCCCCCCCCC-CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhh
Q 017180 151 KFVVDLINAPDSPVSSSE-SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (376)
+|+.+++++++ . ++++|+||||||.+|+.+|.++|++|+++|+++|....... . .. .....
T Consensus 93 ~dl~~~l~~l~------~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~-~-------~~----~~~~~ 154 (296)
T 1j1i_A 93 RHLHDFIKAMN------FDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEI-H-------ED----LRPII 154 (296)
T ss_dssp HHHHHHHHHSC------CSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC---------------------
T ss_pred HHHHHHHHhcC------CCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCC-C-------ch----HHHHh
Confidence 99999999997 5 78999999999999999999999999999999985321100 0 00 00000
Q ss_pred ccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccC--CCCCcHHHHHHHHh
Q 017180 230 RAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLL--DPVNSREEFLQLFA 307 (376)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 307 (376)
... .....+...+. ....+....+++...........+.....+...+.... ..... ..+.+.
T Consensus 155 ~~~-----------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~ 219 (296)
T 1j1i_A 155 NYD-----------FTREGMVHLVK-ALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFY---DPEFIR 219 (296)
T ss_dssp -CC-----------SCHHHHHHHHH-HHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBC---CHHHHT
T ss_pred ccc-----------CCchHHHHHHH-HhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccc---cHHHhh
Confidence 000 00111111111 11122223344443333222211110111111110000 00000 234567
Q ss_pred cccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 308 DLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 308 ~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
++ ++|+|+|+|++|.+++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+||.+..
T Consensus 220 ~i--~~P~Lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 283 (296)
T 1j1i_A 220 KV--QVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATLSFLSLRV 283 (296)
T ss_dssp TC--CSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHHC-
T ss_pred cC--CCCEEEEEECCCcccCHHHHHHHHHHCCCCEEEEECCCCCCchhcCHHHHHHHHHHHHhccC
Confidence 88 99999999999999999999999988999999999998 99999999999999999998764
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=252.14 Aligned_cols=272 Identities=17% Similarity=0.161 Sum_probs=191.5
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
+|.+++|...|+++ +|+|||+||++ ++...|..++..|++ ||+|+++|+||||.|+.+...++.++++++
T Consensus 18 ~g~~l~~~~~g~~~---~~~vl~lHG~~--~~~~~~~~~~~~l~~-----~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 87 (299)
T 3g9x_A 18 LGERMHYVDVGPRD---GTPVLFLHGNP--TSSYLWRNIIPHVAP-----SHRCIAPDLIGMGKSDKPDLDYFFDDHVRY 87 (299)
T ss_dssp TTEEEEEEEESCSS---SCCEEEECCTT--CCGGGGTTTHHHHTT-----TSCEEEECCTTSTTSCCCCCCCCHHHHHHH
T ss_pred CCeEEEEEecCCCC---CCEEEEECCCC--ccHHHHHHHHHHHcc-----CCEEEeeCCCCCCCCCCCCCcccHHHHHHH
Confidence 38899999999765 78999999999 999999999999987 899999999999999977678999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
+.+++++++ .++++|+||||||.+++.+|.++|++|+++|++++.... ...... ......... .+..+
T Consensus 88 ~~~~~~~~~------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~--~~~~~~---~~~~~~~~~-~~~~~ 155 (299)
T 3g9x_A 88 LDAFIEALG------LEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPF--PTWDEW---PEFARETFQ-AFRTA 155 (299)
T ss_dssp HHHHHHHTT------CCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCB--SSGGGS---CGGGHHHHH-HHTSS
T ss_pred HHHHHHHhC------CCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcch--hhhhhc---chHHHHHHH-HHcCC
Confidence 999999997 678999999999999999999999999999999853211 100000 011111111 12222
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCC------cHHHHHHHH
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVN------SREEFLQLF 306 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 306 (376)
........ .....+....... . .....++....+......+........+......... ...+....+
T Consensus 156 ~~~~~~~~---~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 229 (299)
T 3g9x_A 156 DVGRELII---DQNAFIEGALPKC-V--VRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWL 229 (299)
T ss_dssp SHHHHHHT---TSCHHHHTHHHHT-C--SSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHH
T ss_pred Ccchhhhc---cchhhHHHhhhhh-h--ccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhhc
Confidence 22221111 1122222222211 1 1234555555444433332222222222211111000 011345567
Q ss_pred hcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcCC
Q 017180 307 ADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFEP 374 (376)
Q Consensus 307 ~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~~ 374 (376)
.++ ++|+++|+|++|.+++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+|+.+....
T Consensus 230 ~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~~~~~~~~~ 296 (299)
T 3g9x_A 230 HQS--PVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPALHHH 296 (299)
T ss_dssp HHC--CSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCHHHHCHHHHHHHHHHHSGGGCCC
T ss_pred ccC--CCCeEEEecCCCCCCCHHHHHHHHhhCCCCeEEEeCCCCCcchhcCHHHHHHHHHHHHhhhhhc
Confidence 788 99999999999999999999999999999999999988 9999999999999999999987654
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-35 Score=252.24 Aligned_cols=249 Identities=12% Similarity=0.144 Sum_probs=165.8
Q ss_pred eEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHH
Q 017180 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVD 155 (376)
Q Consensus 76 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~ 155 (376)
+++|...|+.++..+++|||+||++ ++...|..+++.|++ +|+|+++|+||||.|+.+. .++.+++++|+.+
T Consensus 2 ~l~y~~~G~~~~~~~~~vvllHG~~--~~~~~w~~~~~~L~~-----~~~via~Dl~G~G~S~~~~-~~~~~~~a~dl~~ 73 (255)
T 3bf7_A 2 KLNIRAQTAQNQHNNSPIVLVHGLF--GSLDNLGVLARDLVN-----DHNIIQVDVRNHGLSPREP-VMNYPAMAQDLVD 73 (255)
T ss_dssp CCCEEEECCSSCCCCCCEEEECCTT--CCTTTTHHHHHHHTT-----TSCEEEECCTTSTTSCCCS-CCCHHHHHHHHHH
T ss_pred ceeeeecCccccCCCCCEEEEcCCc--ccHhHHHHHHHHHHh-----hCcEEEecCCCCCCCCCCC-CcCHHHHHHHHHH
Confidence 4678888864211278999999999 999999999999988 7999999999999998654 6899999999999
Q ss_pred HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchh
Q 017180 156 LINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVG 235 (376)
Q Consensus 156 ~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (376)
++++++ .++++|+||||||.+|+.+|.++|++|+++|++++..... + ... .......+......
T Consensus 74 ~l~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~-~----~~~-~~~~~~~~~~~~~~---- 137 (255)
T 3bf7_A 74 TLDALQ------IDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDY-H----VRR-HDEIFAAINAVSES---- 137 (255)
T ss_dssp HHHHHT------CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCC-C----SCC-CHHHHHHHHHHHHS----
T ss_pred HHHHcC------CCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccC-C----ccc-HHHHHHHHHhcccc----
Confidence 999997 6889999999999999999999999999999997532110 0 000 00000000000000
Q ss_pred hHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccC-CCchhHHHhhccCCCCCcHHHHH--HHHhcccCC
Q 017180 236 WMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKG-ARYVPAAFLTGLLDPVNSREEFL--QLFADLEGK 312 (376)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~ 312 (376)
.. .........+. . ...+.....+........ ........... ...+. +.+.++ +
T Consensus 138 -----~~-~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~i--~ 195 (255)
T 3bf7_A 138 -----DA-QTRQQAAAIMR-Q------HLNEEGVIQFLLKSFVDGEWRFNVPVLWDQ-------YPHIVGWEKIPAW--D 195 (255)
T ss_dssp -----CC-CSHHHHHHHHT-T------TCCCHHHHHHHHTTEETTEESSCHHHHHHT-------HHHHHCCCCCCCC--C
T ss_pred -----cc-ccHHHHHHHHh-h------hcchhHHHHHHHHhccCCceeecHHHHHhh-------hhhcccccccccc--C
Confidence 00 00111110110 0 011111111110000000 00000000000 00000 113466 8
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 313 LPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 313 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+|+|+|+|++|.+++.+..+.+.+..+++++++++++ |+++.|+|+++++.|.+||++
T Consensus 196 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 196 HPALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_dssp SCEEEECBTTCSTTCGGGHHHHHHHCTTEEECCBTTCCSCHHHHCHHHHHHHHHHHHHT
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHCCCCeEEEeCCCCCccccCCHHHHHHHHHHHHhc
Confidence 9999999999999999888999888999999999998 999999999999999999975
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-34 Score=249.96 Aligned_cols=256 Identities=10% Similarity=0.077 Sum_probs=166.1
Q ss_pred CCceeEEEEec--ccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHH
Q 017180 72 ENSINIYYEKH--ERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVM 149 (376)
Q Consensus 72 ~~g~~l~y~~~--g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~ 149 (376)
.+|.+++|... |.+ +|+|||+||++ .+...|+.+++.|++ +|+||++|+||||+|+.+...|+++++
T Consensus 11 ~~g~~l~y~~~~~G~~----~p~vvllHG~~--~~~~~w~~~~~~L~~-----~~rvia~DlrGhG~S~~~~~~~~~~~~ 79 (276)
T 2wj6_A 11 VFDNKLSYIDNQRDTD----GPAILLLPGWC--HDHRVYKYLIQELDA-----DFRVIVPNWRGHGLSPSEVPDFGYQEQ 79 (276)
T ss_dssp ETTEEEEEEECCCCCS----SCEEEEECCTT--CCGGGGHHHHHHHTT-----TSCEEEECCTTCSSSCCCCCCCCHHHH
T ss_pred eCCeEEEEEEecCCCC----CCeEEEECCCC--CcHHHHHHHHHHHhc-----CCEEEEeCCCCCCCCCCCCCCCCHHHH
Confidence 35899999998 742 57899999999 999999999999997 799999999999999977678999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhC-CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN-LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~-p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
++|+.+++++++ .++++||||||||.+|+.+|.++ |++|+++|++++...... ..........
T Consensus 80 a~dl~~ll~~l~------~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~----------~~~~~~~~~~ 143 (276)
T 2wj6_A 80 VKDALEILDQLG------VETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPK----------PDFAKSLTLL 143 (276)
T ss_dssp HHHHHHHHHHHT------CCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCC----------HHHHHHHHHH
T ss_pred HHHHHHHHHHhC------CCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCC----------chHHHHhhhc
Confidence 999999999997 78899999999999999999999 999999999986421110 0000001000
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
......... ....+..+.. . ...++..+....... .........................+.+.+
T Consensus 144 ~~~~~~~~~-------~~~~~~~~~~-~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 208 (276)
T 2wj6_A 144 KDPERWREG-------THGLFDVWLD-G------HDEKRVRHHLLEEMA-DYGYDCWGRSGRVIEDAYGRNGSPMQMMAN 208 (276)
T ss_dssp HCTTTHHHH-------HHHHHHHHHT-T------BCCHHHHHHHHTTTT-TCCHHHHHHHHHHHHHHHHHHCCHHHHHHT
T ss_pred cCcchHHHH-------HHHHHHHhhc-c------cchHHHHHHHHHHhh-hcchhhhhhccchhHHHHhhccchhhHHhh
Confidence 000000000 0011111110 0 011111111110000 000000000000000000000002345677
Q ss_pred ccCCCcEEEEEeCCCCCCC--HHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 309 LEGKLPLLVVSTEGSPRRS--KAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
+ ++|+++++|..|...+ ....+.+.+.+|++++++++++ |++++|+|++|++.|.+||.+.
T Consensus 209 i--~~P~lv~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~i~~~gH~~~~e~P~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 209 L--TKTRPIRHIFSQPTEPEYEKINSDFAEQHPWFSYAKLGGPTHFPAIDVPDRAAVHIREFATAI 272 (276)
T ss_dssp C--SSCCCEEEEECCSCSHHHHHHHHHHHHHCTTEEEEECCCSSSCHHHHSHHHHHHHHHHHHHHH
T ss_pred c--CCCceEEEEecCccchhHHHHHHHHHhhCCCeEEEEeCCCCCcccccCHHHHHHHHHHHHhhc
Confidence 8 8999999874443332 2445667778899999999998 9999999999999999999865
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=248.02 Aligned_cols=275 Identities=16% Similarity=0.183 Sum_probs=189.8
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
+|.+++|...|+ +|+|||+||++ ++...|..++..|... ||+|+++|+||||.|+.+...++.++++++
T Consensus 17 ~g~~l~~~~~g~-----~~~vv~~HG~~--~~~~~~~~~~~~l~~~----g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~ 85 (309)
T 3u1t_A 17 EGATIAYVDEGS-----GQPVLFLHGNP--TSSYLWRNIIPYVVAA----GYRAVAPDLIGMGDSAKPDIEYRLQDHVAY 85 (309)
T ss_dssp TTEEEEEEEEEC-----SSEEEEECCTT--CCGGGGTTTHHHHHHT----TCEEEEECCTTSTTSCCCSSCCCHHHHHHH
T ss_pred CCeEEEEEEcCC-----CCEEEEECCCc--chhhhHHHHHHHHHhC----CCEEEEEccCCCCCCCCCCcccCHHHHHHH
Confidence 389999999987 67999999999 9999999999995544 999999999999999987778999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
+.+++++++ .++++|+||||||.+++.+|.++|++|+++|+++|........ ............... ....+
T Consensus 86 ~~~~~~~~~------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~ 157 (309)
T 3u1t_A 86 MDGFIDALG------LDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPM-PSYEAMGPQLGPLFR-DLRTA 157 (309)
T ss_dssp HHHHHHHHT------CCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSB-SCSGGGHHHHHHHHH-HHTST
T ss_pred HHHHHHHcC------CCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCcccc-ccccccchhhhHHHH-HHhcc
Confidence 999999997 6889999999999999999999999999999999754221110 010011111111111 11122
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCC------cHHHHHHHH
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVN------SREEFLQLF 306 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 306 (376)
........ .....+...+..... .....++....+...............+......... ...+..+.+
T Consensus 158 ~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 232 (309)
T 3u1t_A 158 DVGEKMVL---DGNFFVETILPEMGV--VRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWL 232 (309)
T ss_dssp THHHHHHT---TTCHHHHTHHHHTSC--SSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHH
T ss_pred chhhhhcc---ccceehhhhcccccc--cccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhc
Confidence 11111111 112222222222101 1234555555444332222222222222211111000 111345567
Q ss_pred hcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 307 ADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 307 ~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
.++ ++|+|+|+|++|.+++.+..+.+.+..++.++++++++ |++++++|+++++.|.+||++...
T Consensus 233 ~~i--~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~ 298 (309)
T 3u1t_A 233 MAS--PIPKLLFHAEPGALAPKPVVDYLSENVPNLEVRFVGAGTHFLQEDHPHLIGQGIADWLRRNKP 298 (309)
T ss_dssp HHC--CSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCHHHHCHHHHHHHHHHHHHHHCC
T ss_pred ccC--CCCEEEEecCCCCCCCHHHHHHHHhhCCCCEEEEecCCcccchhhCHHHHHHHHHHHHHhcch
Confidence 788 99999999999999999999999999999999999888 999999999999999999998754
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=253.92 Aligned_cols=272 Identities=14% Similarity=0.147 Sum_probs=176.4
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC-----CCC
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM-----DYN 145 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~-----~~~ 145 (376)
..+|.+++|...|+ +++|||+||++ .+...|+.+++.|.+ +|+|+++|+||||.|+.+.. .++
T Consensus 11 ~~~~~~~~~~~~g~-----g~~~vllHG~~--~~~~~w~~~~~~l~~-----~~~vi~~Dl~G~G~s~~~~~~~~~~~~~ 78 (291)
T 3qyj_A 11 DTTEARINLVKAGH-----GAPLLLLHGYP--QTHVMWHKIAPLLAN-----NFTVVATDLRGYGDSSRPASVPHHINYS 78 (291)
T ss_dssp ECSSCEEEEEEECC-----SSEEEEECCTT--CCGGGGTTTHHHHTT-----TSEEEEECCTTSTTSCCCCCCGGGGGGS
T ss_pred ecCCeEEEEEEcCC-----CCeEEEECCCC--CCHHHHHHHHHHHhC-----CCEEEEEcCCCCCCCCCCCCCccccccC
Confidence 34588999999986 78999999999 999999999999987 89999999999999996643 389
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHH
Q 017180 146 ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLL 225 (376)
Q Consensus 146 ~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~ 225 (376)
.+.+++|+.+++++++ .++++++||||||.+|+.+|.++|++|+++|++++... ....... .........
T Consensus 79 ~~~~~~~~~~~~~~l~------~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~---~~~~~~~-~~~~~~~~~ 148 (291)
T 3qyj_A 79 KRVMAQDQVEVMSKLG------YEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPT---HKMYRTT-DQEFATAYY 148 (291)
T ss_dssp HHHHHHHHHHHHHHTT------CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCH---HHHHHTC-CHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcC------CCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCc---chhhhcc-hhhhhHHHH
Confidence 9999999999999997 77899999999999999999999999999999986310 0000000 000000000
Q ss_pred Hh--hhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHH
Q 017180 226 RG--TLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFL 303 (376)
Q Consensus 226 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (376)
.. ....+.....+... .....++..+ .........++++..+.+......+.........+....... ...+..
T Consensus 149 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 224 (291)
T 3qyj_A 149 HWFFLIQPDNLPETLIGA--NPEYYLRKCL-EKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAATID-LEHDEL 224 (291)
T ss_dssp HHHHTTCSTTHHHHHHHT--CHHHHHHHHH-HHHCSCGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTTHH-HHHHHT
T ss_pred HHHHhccCCCchHHHHcC--CHHHHHHHHH-HhcCCCcccCCHHHHHHHHHHhcCCCcchhHHHHHHcccccc-hhhcch
Confidence 00 00111111111111 1122233222 222222234566777666655443322211111111111000 000111
Q ss_pred HHHhcccCCCcEEEEEeCCCCCCCH-HHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHh
Q 017180 304 QLFADLEGKLPLLVVSTEGSPRRSK-AEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 304 ~~~~~i~~~~Pvlii~G~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~ 370 (376)
..+.++ ++|+|+|+|++|.+.+. .....+.+..++.+..++++||++++|+|+++++.|.+||.+
T Consensus 225 ~~~~~i--~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~E~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 225 DMKQKI--SCPVLVLWGEKGIIGRKYDVLATWRERAIDVSGQSLPCGHFLPEEAPEETYQAIYNFLTH 290 (291)
T ss_dssp TTTCCB--CSCEEEEEETTSSHHHHSCHHHHHHTTBSSEEEEEESSSSCHHHHSHHHHHHHHHHHHHC
T ss_pred hcCCcc--ccceEEEecccccccchhhHHHHHHhhcCCcceeeccCCCCchhhCHHHHHHHHHHHHhc
Confidence 235677 99999999999975432 234445556678888888855999999999999999999974
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=247.20 Aligned_cols=257 Identities=13% Similarity=0.115 Sum_probs=173.6
Q ss_pred eeEEEEecccCCCCCCC-cEEEecCCC-CCccchHhHHHH-HHHHhhhCCcceEEEEeCCCCCcCCCCCCC-CCCHHHHH
Q 017180 75 INIYYEKHERESPDPSK-NILMIPTIS-DVSTVEEWRLVA-QDIVQRVGKVNWRATIVDWPGLGYSDRPKM-DYNADVME 150 (376)
Q Consensus 75 ~~l~y~~~g~~~~~~~~-~vvllHG~~-~~~~~~~~~~~~-~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~-~~~~~~~~ 150 (376)
.+++|...|+ ++ +|||+||++ +..+...|..++ +.|.+ +|+|+++|+||||.|+.+.. .++.++++
T Consensus 25 ~~l~y~~~g~-----g~~~vvllHG~~~~~~~~~~~~~~~~~~l~~-----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 94 (289)
T 1u2e_A 25 LRIHFNDCGQ-----GDETVVLLHGSGPGATGWANFSRNIDPLVEA-----GYRVILLDCPGWGKSDSVVNSGSRSDLNA 94 (289)
T ss_dssp EEEEEEEECC-----CSSEEEEECCCSTTCCHHHHTTTTHHHHHHT-----TCEEEEECCTTSTTSCCCCCSSCHHHHHH
T ss_pred EEEEEeccCC-----CCceEEEECCCCcccchhHHHHHhhhHHHhc-----CCeEEEEcCCCCCCCCCCCccccCHHHHH
Confidence 8999999986 44 899999985 223456788888 88888 79999999999999996654 78999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
+++.+++++++ .++++|+||||||.+++.+|.++|++|+++|++++........ ... ........ .....
T Consensus 95 ~~l~~~l~~l~------~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~-~~~~~~~~-~~~~~ 164 (289)
T 1u2e_A 95 RILKSVVDQLD------IAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLF--TPM-PTEGIKRL-NQLYR 164 (289)
T ss_dssp HHHHHHHHHTT------CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSS--SCS-SCHHHHHH-HHHHH
T ss_pred HHHHHHHHHhC------CCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccc--ccc-chhhHHHH-HHHHh
Confidence 99999999997 6789999999999999999999999999999999854211100 000 00000000 00000
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHh-ccCCCchhHHHh-hccCCCCCcHHHHHHHHhc
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTK-RKGARYVPAAFL-TGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 308 (376)
.+ ....+...+. ....+.....++.......... .+.........+ ....... + ..+.+.+
T Consensus 165 ~~------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~l~~ 227 (289)
T 1u2e_A 165 QP------------TIENLKLMMD-IFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFP-D---FGPRLAE 227 (289)
T ss_dssp SC------------CHHHHHHHHH-TTSSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSC-C---CGGGGGG
T ss_pred cc------------hHHHHHHHHH-HhhcCcccCCHHHHHHHHHHhhcChhHHHHHHHHHHhcccccc-c---hhhHHhh
Confidence 00 0112221121 2222223334444333222111 100000001011 0000000 0 2345677
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+ ++|+|+|+|++|.+++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+||.+
T Consensus 228 i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 228 I--KAQTLIVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHWAQWEHADAFNQLVLNFLAR 288 (289)
T ss_dssp C--CSCEEEEEETTCSSSCTHHHHHHHHHSTTCEEEEESSCCSCHHHHTHHHHHHHHHHHHTC
T ss_pred c--CCCeEEEeeCCCCccCHHHHHHHHhhCCCcEEEEeCCCCCchhhcCHHHHHHHHHHHhcC
Confidence 8 99999999999999999999999988999999999998 999999999999999999964
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-34 Score=250.47 Aligned_cols=275 Identities=13% Similarity=0.129 Sum_probs=180.1
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC-----CCC
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM-----DYN 145 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~-----~~~ 145 (376)
..+|.+++|...|+ +|+|||+||++ ++...|..++..|.+ ||+|+++|+||||.|+.+.. .++
T Consensus 19 ~~~g~~l~~~~~g~-----~~~vv~lHG~~--~~~~~~~~~~~~l~~-----~~~v~~~D~~G~G~S~~~~~~~~~~~~~ 86 (306)
T 3r40_A 19 NTSSGRIFARVGGD-----GPPLLLLHGFP--QTHVMWHRVAPKLAE-----RFKVIVADLPGYGWSDMPESDEQHTPYT 86 (306)
T ss_dssp CCTTCCEEEEEEEC-----SSEEEEECCTT--CCGGGGGGTHHHHHT-----TSEEEEECCTTSTTSCCCCCCTTCGGGS
T ss_pred EeCCEEEEEEEcCC-----CCeEEEECCCC--CCHHHHHHHHHHhcc-----CCeEEEeCCCCCCCCCCCCCCcccCCCC
Confidence 34588999999984 78999999999 999999999999998 89999999999999996654 689
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHH-
Q 017180 146 ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGL- 224 (376)
Q Consensus 146 ~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~- 224 (376)
.+++++++.+++++++ .++++|+||||||.+++.+|.++|++|+++|++++.... ... .... .......
T Consensus 87 ~~~~~~~~~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~--~~~-~~~~-~~~~~~~~ 156 (306)
T 3r40_A 87 KRAMAKQLIEAMEQLG------HVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTY--EYW-QRMN-RAYALKIY 156 (306)
T ss_dssp HHHHHHHHHHHHHHTT------CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHH--HHH-HHCS-HHHHHHST
T ss_pred HHHHHHHHHHHHHHhC------CCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCc--cch-hhhh-hhhhhhhH
Confidence 9999999999999997 678999999999999999999999999999999973200 000 0000 0000000
Q ss_pred -HHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCC--CCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCC-cHH
Q 017180 225 -LRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSN--PDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVN-SRE 300 (376)
Q Consensus 225 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 300 (376)
.............+... .....+...+. ..... ....+++..+.+......+.........+........ ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (306)
T 3r40_A 157 HWSFLAQPAPLPENLLGG--DPDFYVKAKLA-SWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYADFEHDK 233 (306)
T ss_dssp HHHHHTSCTTHHHHHHTS--CHHHHHHHHHH-HTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHhhcccchHHHHHcC--CHHHHHHHHhh-cccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhcccccchhhh
Confidence 00000111111111111 11233332222 33322 3456677777666554432222121111111111000 000
Q ss_pred HHHHHHhcccCCCcEEEEEeCCCCCCC-HHHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhhc
Q 017180 301 EFLQLFADLEGKLPLLVVSTEGSPRRS-KAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 301 ~~~~~~~~i~~~~Pvlii~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
.....+.++ ++|+|+|+|++|.+++ ....+.+.+..+++++++++++|+++.|+|+++++.|.+||++..
T Consensus 234 ~~~~~l~~i--~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (306)
T 3r40_A 234 IDVEAGNKI--PVPMLALWGASGIAQSAATPLDVWRKWASDVQGAPIESGHFLPEEAPDQTAEALVRFFSAAP 304 (306)
T ss_dssp HHHHHTCCB--CSCEEEEEETTCC------CHHHHHHHBSSEEEEEESSCSCHHHHSHHHHHHHHHHHHHC--
T ss_pred hhhhhccCC--CcceEEEEecCCcccCchhHHHHHHhhcCCCeEEEecCCcCchhhChHHHHHHHHHHHHhcc
Confidence 011245778 9999999999999998 566666777788999999943399999999999999999998764
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-33 Score=242.89 Aligned_cols=261 Identities=18% Similarity=0.214 Sum_probs=168.9
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVM 149 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~ 149 (376)
.+|.+++|...|++++ +++|||+||++ ++...|..+++.|++ +|+||++|+||||.|+.+. ..++.+++
T Consensus 13 ~~g~~l~~~~~g~~~~--~~~vvllHG~~--~~~~~~~~~~~~L~~-----~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~ 83 (285)
T 3bwx_A 13 SDGLRLHFRAYEGDIS--RPPVLCLPGLT--RNARDFEDLATRLAG-----DWRVLCPEMRGRGDSDYAKDPMTYQPMQY 83 (285)
T ss_dssp TTSCEEEEEEECBCTT--SCCEEEECCTT--CCGGGGHHHHHHHBB-----TBCEEEECCTTBTTSCCCSSGGGCSHHHH
T ss_pred CCCceEEEEEcCCCCC--CCcEEEECCCC--cchhhHHHHHHHhhc-----CCEEEeecCCCCCCCCCCCCccccCHHHH
Confidence 4588999999987532 67899999999 999999999999998 8999999999999998543 46899999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhh
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (376)
++|+.+++++++ .++++|+||||||.+|+.+|.++|++|+++|++++... .. ...... +....
T Consensus 84 a~dl~~~l~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~--~~--------~~~~~~-~~~~~ 146 (285)
T 3bwx_A 84 LQDLEALLAQEG------IERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPE--VS--------PEGLER-IRGYV 146 (285)
T ss_dssp HHHHHHHHHHHT------CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSS--CC--------HHHHHH-HHHHT
T ss_pred HHHHHHHHHhcC------CCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcc--cC--------cchhHH-HHHHh
Confidence 999999999997 67899999999999999999999999999999875210 00 000000 00000
Q ss_pred cc-CchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccC--CCc--hh-HHHhhccCCC--CCcHHH
Q 017180 230 RA-PGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKG--ARY--VP-AAFLTGLLDP--VNSREE 301 (376)
Q Consensus 230 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~-~~~~~~~~~~--~~~~~~ 301 (376)
.. ..... ... ....+.... ...+. ....+............. ... .+ .......... .....+
T Consensus 147 ~~~~~~~~-~~~----~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (285)
T 3bwx_A 147 GQGRNFET-WMH----AARALQESS-GDVYP---DWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVD 217 (285)
T ss_dssp TCCCEESS-HHH----HHHHHHHHH-TTTST---TCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSC
T ss_pred cCCccccc-HHH----HHHHHHHhh-hhccc---ccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccch
Confidence 00 00000 000 001111111 01110 122222221111111110 000 00 0000000000 000000
Q ss_pred HHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 302 FLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 302 ~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
..+.+.++. ++|+|+|+|++|.+++.+..+.+.+. +++++++++++ |++++|+|+.+ +.|.+||++
T Consensus 218 ~~~~~~~~~-~~P~lii~G~~D~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 218 MWPLFDALA-TRPLLVLRGETSDILSAQTAAKMASR-PGVELVTLPRIGHAPTLDEPESI-AAIGRLLER 284 (285)
T ss_dssp CHHHHHHHT-TSCEEEEEETTCSSSCHHHHHHHHTS-TTEEEEEETTCCSCCCSCSHHHH-HHHHHHHTT
T ss_pred hhHHHHHcc-CCCeEEEEeCCCCccCHHHHHHHHhC-CCcEEEEeCCCCccchhhCchHH-HHHHHHHHh
Confidence 222333332 68999999999999999999999888 99999999998 99999999987 589999975
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-34 Score=255.57 Aligned_cols=270 Identities=13% Similarity=0.103 Sum_probs=171.9
Q ss_pred CceeEEEEecccCCCC-CCCcEEEecCCCCCccchHhHHHHHHHHh-hhCCcceEEEEeCCCCCcCCCC--CC--CCCCH
Q 017180 73 NSINIYYEKHERESPD-PSKNILMIPTISDVSTVEEWRLVAQDIVQ-RVGKVNWRATIVDWPGLGYSDR--PK--MDYNA 146 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~-~~~~vvllHG~~~~~~~~~~~~~~~~L~~-~~~~~~~~Vi~~D~~G~G~S~~--~~--~~~~~ 146 (376)
+|.+++|...|+.... +++||||+||++ ++...|..++..|.+ . +|+||++|+||||.|+. +. ..++.
T Consensus 36 ~g~~l~y~~~G~~~~~~~g~plvllHG~~--~~~~~w~~~~~~l~~~~----~~~Via~D~rG~G~S~~~~~~~~~~~~~ 109 (330)
T 3nwo_A 36 GDHETWVQVTTPENAQPHALPLIVLHGGP--GMAHNYVANIAALADET----GRTVIHYDQVGCGNSTHLPDAPADFWTP 109 (330)
T ss_dssp TTEEEEEEEECCSSCCTTCCCEEEECCTT--TCCSGGGGGGGGHHHHH----TCCEEEECCTTSTTSCCCTTSCGGGCCH
T ss_pred cCcEEEEEEecCccCCCCCCcEEEECCCC--CCchhHHHHHHHhcccc----CcEEEEECCCCCCCCCCCCCCccccccH
Confidence 3999999999974221 134899999999 888889888888884 3 89999999999999985 22 35799
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHH
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLR 226 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 226 (376)
+.+++|+.+++++++ .++++|+||||||.+|+.+|.++|++|.++|++++.... + .+......+.
T Consensus 110 ~~~a~dl~~ll~~lg------~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~--~-------~~~~~~~~~~ 174 (330)
T 3nwo_A 110 QLFVDEFHAVCTALG------IERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASM--R-------LWSEAAGDLR 174 (330)
T ss_dssp HHHHHHHHHHHHHHT------CCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBH--H-------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC------CCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcch--H-------HHHHHHHHHH
Confidence 999999999999997 688999999999999999999999999999999873200 0 0000000000
Q ss_pred hhhccCchhhHHh-----hhhhccHH---HHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhc-cCCCCC
Q 017180 227 GTLRAPGVGWMMY-----NMLVSNEK---AIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTG-LLDPVN 297 (376)
Q Consensus 227 ~~~~~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 297 (376)
.... ......+. ... .... ....++.... .......++...........+ ..+...... ......
T Consensus 175 ~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 248 (330)
T 3nwo_A 175 AQLP-AETRAALDRHEAAGTI-THPDYLQAAAEFYRRHV-CRVVPTPQDFADSVAQMEAEP---TVYHTMNGPNEFHVVG 248 (330)
T ss_dssp HHSC-HHHHHHHHHHHHHTCT-TSHHHHHHHHHHHHHHT-CCSSSCCHHHHHHHHHHHHSC---HHHHHHTCSCSSSCCS
T ss_pred HhcC-HHHHHHHHHHHhccCC-CCHHHHHHHHHHHHHhh-ccccCCCHHHHHHHHhhccch---hhhhcccCchhhhhhc
Confidence 0000 00000000 000 0011 1111111111 111112222222221111100 001000000 000000
Q ss_pred --cHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 298 --SREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 298 --~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
...+..+.+.+| ++|+|+|+|++|.+++ ...+.+.+.+|++++++++++ |++++|+|++|++.|.+||.+..
T Consensus 249 ~~~~~~~~~~l~~i--~~P~Lvi~G~~D~~~p-~~~~~~~~~ip~~~~~~i~~~gH~~~~e~p~~~~~~i~~FL~~~~ 323 (330)
T 3nwo_A 249 TLGDWSVIDRLPDV--TAPVLVIAGEHDEATP-KTWQPFVDHIPDVRSHVFPGTSHCTHLEKPEEFRAVVAQFLHQHD 323 (330)
T ss_dssp GGGGCBCGGGGGGC--CSCEEEEEETTCSSCH-HHHHHHHHHCSSEEEEEETTCCTTHHHHSHHHHHHHHHHHHHHHH
T ss_pred cccCCchhhhcccC--CCCeEEEeeCCCccCh-HHHHHHHHhCCCCcEEEeCCCCCchhhcCHHHHHHHHHHHHHhcc
Confidence 000123457788 9999999999999876 467788888999999999999 99999999999999999998764
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-33 Score=248.16 Aligned_cols=268 Identities=16% Similarity=0.159 Sum_probs=173.0
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEK 151 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~~~ 151 (376)
+|.+++|...|++. +|+|||+||++ ++...|..+++.|++ +|+|+++|+||||.|+.+. ..++++++++
T Consensus 29 ~g~~l~y~~~G~g~---~~~vvllHG~~--~~~~~w~~~~~~L~~-----~~~via~Dl~GhG~S~~~~~~~~~~~~~a~ 98 (318)
T 2psd_A 29 LDSFINYYDSEKHA---ENAVIFLHGNA--TSSYLWRHVVPHIEP-----VARCIIPDLIGMGKSGKSGNGSYRLLDHYK 98 (318)
T ss_dssp TTEEEEEEECCSCT---TSEEEEECCTT--CCGGGGTTTGGGTTT-----TSEEEEECCTTSTTCCCCTTSCCSHHHHHH
T ss_pred CCeEEEEEEcCCCC---CCeEEEECCCC--CcHHHHHHHHHHhhh-----cCeEEEEeCCCCCCCCCCCCCccCHHHHHH
Confidence 48899999998743 56899999999 999999999999988 6899999999999999653 4589999999
Q ss_pred HHHHHHhCCCCCCCCCC-CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 152 FVVDLINAPDSPVSSSE-SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
|+.+++++++ . ++++||||||||.+|+.+|.++|++|+++|++++.... .+......... ..+..+.
T Consensus 99 dl~~ll~~l~------~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~-~~~~~~~~~~~----~~~~~~~- 166 (318)
T 2psd_A 99 YLTAWFELLN------LPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDV-IESWDEWPDIE----EDIALIK- 166 (318)
T ss_dssp HHHHHHTTSC------CCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSC-BSCCTTSCSCH----HHHHHHH-
T ss_pred HHHHHHHhcC------CCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCC-ccchhhhhhHH----HHHHHHh-
Confidence 9999999997 5 78999999999999999999999999999998863211 00000000000 1111110
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCC-CchhHHHhhcc-CCC-C-Cc----HHHH
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGA-RYVPAAFLTGL-LDP-V-NS----REEF 302 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~-~-~~----~~~~ 302 (376)
.+....... .....+......... ....++..+.+......++. ......+.... ... . .. ....
T Consensus 167 ~~~~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (318)
T 2psd_A 167 SEEGEKMVL----ENNFFVETVLPSKIM---RKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNY 239 (318)
T ss_dssp STHHHHHHT----TTCHHHHTHHHHTCS---SCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHH
T ss_pred cccchhhhh----cchHHHHhhcccccc---ccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHH
Confidence 000000000 001111111111111 12334444333322211100 01111111110 000 0 00 0112
Q ss_pred HHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 303 LQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 303 ~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
.+.+.++. ++|+|+|+|++| +++. ..+.+.+..++.+++++ ++ |++++|+|+++++.|.+||++...
T Consensus 240 ~~~l~~i~-~~P~Lvi~G~~D-~~~~-~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~~~ 307 (318)
T 2psd_A 240 NAYLRASD-DLPKLFIESDPG-FFSN-AIVEGAKKFPNTEFVKV-KGLHFLQEDAPDEMGKYIKSFVERVLK 307 (318)
T ss_dssp HHHHHTCT-TSCEEEEEEEEC-SSHH-HHHHHHTTSSSEEEEEE-EESSSGGGTCHHHHHHHHHHHHHHHHC
T ss_pred HHHhcccc-CCCeEEEEeccc-cCcH-HHHHHHHhCCCcEEEEe-cCCCCCHhhCHHHHHHHHHHHHHHhhc
Confidence 23344431 789999999999 8887 78888888899999999 56 999999999999999999988654
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=243.54 Aligned_cols=240 Identities=14% Similarity=0.149 Sum_probs=165.7
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCcc-chHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCC---HHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVST-VEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYN---ADV 148 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~-~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~---~~~ 148 (376)
+|.+++|...|++ +++|||+||++ ++ ...|..+++.|.+. ||+|+++|+||||.|+.+...++ .++
T Consensus 10 ~g~~l~~~~~g~~----~~~vvllHG~~--~~~~~~~~~~~~~l~~~----g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 79 (254)
T 2ocg_A 10 NGVQLHYQQTGEG----DHAVLLLPGML--GSGETDFGPQLKNLNKK----LFTVVAWDPRGYGHSRPPDRDFPADFFER 79 (254)
T ss_dssp TTEEEEEEEEECC----SEEEEEECCTT--CCHHHHCHHHHHHSCTT----TEEEEEECCTTSTTCCSSCCCCCTTHHHH
T ss_pred CCEEEEEEEecCC----CCeEEEECCCC--CCCccchHHHHHHHhhC----CCeEEEECCCCCCCCCCCCCCCChHHHHH
Confidence 4889999999863 45899999998 77 67899999999885 79999999999999986655667 677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
.++++.+++++++ .++++|+||||||.+|+.+|.++|++|+++|++++... .. ..........
T Consensus 80 ~~~~~~~~l~~l~------~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~--~~---------~~~~~~~~~~ 142 (254)
T 2ocg_A 80 DAKDAVDLMKALK------FKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAY--VT---------DEDSMIYEGI 142 (254)
T ss_dssp HHHHHHHHHHHTT------CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSB--CC---------HHHHHHHHTT
T ss_pred HHHHHHHHHHHhC------CCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccc--cC---------hhhHHHHHHH
Confidence 8889999999986 67899999999999999999999999999999987421 00 0000001000
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
.......... ...+........ .......+.... ..+....... ...+.+++
T Consensus 143 ~~~~~~~~~~-------~~~~~~~~~~~~-------~~~~~~~~~~~~---------~~~~~~~~~~-----~~~~~l~~ 194 (254)
T 2ocg_A 143 RDVSKWSERT-------RKPLEALYGYDY-------FARTCEKWVDGI---------RQFKHLPDGN-----ICRHLLPR 194 (254)
T ss_dssp SCGGGSCHHH-------HHHHHHHHCHHH-------HHHHHHHHHHHH---------HGGGGSGGGB-----SSGGGGGG
T ss_pred HHHHHHHHHh-------HHHHHHHhcchh-------hHHHHHHHHHHH---------HHHHhccCCc-----hhhhhhhc
Confidence 0000000000 000000000000 000000000000 0000000000 02335677
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
+ ++|+|+|+|++|.+++.+..+.+.+..+++++++++++ |+++.|+|+++++.|.+||+
T Consensus 195 i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 254 (254)
T 2ocg_A 195 V--QCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAEDFLQ 254 (254)
T ss_dssp C--CSCEEEEEETTCSSSCHHHHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred c--cCCEEEEecCCCccCCHHHHHHHHHhCCCCEEEEcCCCCCchhhhCHHHHHHHHHHHhC
Confidence 8 99999999999999999999999988999999999999 99999999999999999983
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=248.90 Aligned_cols=252 Identities=15% Similarity=0.134 Sum_probs=168.5
Q ss_pred EEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC----CCCCHHHHHHHH
Q 017180 78 YYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK----MDYNADVMEKFV 153 (376)
Q Consensus 78 ~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~----~~~~~~~~~~~l 153 (376)
+|...|++ +|+|||+||++ ++...|..+++.|++ +|+||++|+||||.|+.+. ..++++++++|+
T Consensus 12 ~~~~~G~g----~~~vvllHG~~--~~~~~w~~~~~~L~~-----~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl 80 (271)
T 1wom_A 12 HVKVKGSG----KASIMFAPGFG--CDQSVWNAVAPAFEE-----DHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDV 80 (271)
T ss_dssp TCEEEECC----SSEEEEECCTT--CCGGGGTTTGGGGTT-----TSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHH
T ss_pred eeEeecCC----CCcEEEEcCCC--CchhhHHHHHHHHHh-----cCeEEEECCCCCCCCCCCcccccccccHHHHHHHH
Confidence 45666753 57899999999 999999999999987 7999999999999998543 236899999999
Q ss_pred HHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCC--cccCCCCchhhhhHHHHhhhcc
Q 017180 154 VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLP--IVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 154 ~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
.+++++++ .++++|+||||||.+++.+|.++|++|+++|++++....... ..... .............
T Consensus 81 ~~~l~~l~------~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--- 150 (271)
T 1wom_A 81 LDVCEALD------LKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGG-FEEEQLLGLLEMM--- 150 (271)
T ss_dssp HHHHHHTT------CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECS-BCHHHHHHHHHHH---
T ss_pred HHHHHHcC------CCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccC-CCHHHHHHHHHHH---
Confidence 99999997 688999999999999999999999999999999874210000 00000 0000000000000
Q ss_pred CchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccC
Q 017180 232 PGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEG 311 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 311 (376)
... ....... +....... ...++..+.+........ ......+........ ..+.++++
T Consensus 151 -------~~~---~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~l~~i-- 209 (271)
T 1wom_A 151 -------EKN---YIGWATV-FAATVLNQ--PDRPEIKEELESRFCSTD-PVIARQFAKAAFFSD-----HREDLSKV-- 209 (271)
T ss_dssp -------HHC---HHHHHHH-HHHHHHCC--TTCHHHHHHHHHHHHHSC-HHHHHHHHHHHHSCC-----CHHHHTTC--
T ss_pred -------hhh---HHHHHHH-HHHHHhcC--CCchHHHHHHHHHHhcCC-cHHHHHHHHHHhCcc-----hHHhcccc--
Confidence 000 0000000 00001110 122233333322221111 011111111100111 34467788
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
++|+|+|+|++|.+++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+||++.
T Consensus 210 ~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 270 (271)
T 1wom_A 210 TVPSLILQCADDIIAPATVGKYMHQHLPYSSLKQMEARGHCPHMSHPDETIQLIGDYLKAH 270 (271)
T ss_dssp CSCEEEEEEETCSSSCHHHHHHHHHHSSSEEEEEEEEESSCHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHCCCCEEEEeCCCCcCccccCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999988999999999998 9999999999999999999864
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=245.22 Aligned_cols=266 Identities=14% Similarity=0.141 Sum_probs=184.8
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCC----CCHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMD----YNADV 148 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~----~~~~~ 148 (376)
+|.+++|...|+ +|+|||+||++ ++...|..+++.|.+ +|+|+++|+||||.|+.+... ++.++
T Consensus 16 ~g~~l~~~~~g~-----~~~vv~lHG~~--~~~~~~~~~~~~l~~-----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 83 (297)
T 2qvb_A 16 AGKRMAYIDEGK-----GDAIVFQHGNP--TSSYLWRNIMPHLEG-----LGRLVACDLIGMGASDKLSPSGPDRYSYGE 83 (297)
T ss_dssp TTEEEEEEEESS-----SSEEEEECCTT--CCGGGGTTTGGGGTT-----SSEEEEECCTTSTTSCCCSSCSTTSSCHHH
T ss_pred CCEEEEEEecCC-----CCeEEEECCCC--chHHHHHHHHHHHhh-----cCeEEEEcCCCCCCCCCCCCccccCcCHHH
Confidence 389999999986 68999999999 999999999999987 799999999999999976555 89999
Q ss_pred HHHHHHHHHhCCCCCCCCCC-CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHh
Q 017180 149 MEKFVVDLINAPDSPVSSSE-SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRG 227 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (376)
+++++.+++++++ . ++++++||||||.+++.+|.++|++|+++|+++|..... .. ... .......+..
T Consensus 84 ~~~~~~~~l~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~-~~-~~~---~~~~~~~~~~ 152 (297)
T 2qvb_A 84 QRDFLFALWDALD------LGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPM-TW-ADW---PPAVRGVFQG 152 (297)
T ss_dssp HHHHHHHHHHHTT------CCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCB-CG-GGS---CGGGHHHHHH
T ss_pred HHHHHHHHHHHcC------CCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCc-cC-CCC---ChHHHHHHHH
Confidence 9999999999997 5 889999999999999999999999999999999853211 00 000 0111111111
Q ss_pred hhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhcc-CCCchhHHHhhccCCCC------CcHH
Q 017180 228 TLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRK-GARYVPAAFLTGLLDPV------NSRE 300 (376)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~ 300 (376)
+ ..+. ...... .....+...+.... .....++..+.+......+ ........+........ ....
T Consensus 153 ~-~~~~-~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (297)
T 2qvb_A 153 F-RSPQ-GEPMAL---EHNIFVERVLPGAI---LRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVN 224 (297)
T ss_dssp H-TSTT-HHHHHH---TTCHHHHTHHHHTC---SSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHH
T ss_pred H-hccc-chhhhc---cccHHHHHHHhccc---cccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHH
Confidence 1 1111 111111 01122222222111 1234455554444333222 11122222222211000 0112
Q ss_pred HHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 301 ~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
+....++++ ++|+|+|+|++|.+++.+..+.+.+..++ +++++ ++ |+++.|+|+++++.|.+||++...
T Consensus 225 ~~~~~l~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~~~p~~~~~~i~~fl~~~~~ 294 (297)
T 2qvb_A 225 EYRSWLEET--DMPKLFINAEPGAIITGRIRDYVRSWPNQ-TEITV-PGVHFVQEDSPEEIGAAIAQFVRRLRS 294 (297)
T ss_dssp HHHHHHHHC--CSCEEEEEEEECSSSCHHHHHHHHTSSSE-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcccc--cccEEEEecCCCCcCCHHHHHHHHHHcCC-eEEEe-cCccchhhhCHHHHHHHHHHHHHHHhh
Confidence 345667788 99999999999999999999999999999 99999 87 999999999999999999998754
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=241.04 Aligned_cols=267 Identities=12% Similarity=0.102 Sum_probs=185.7
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCC----CCHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMD----YNADV 148 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~----~~~~~ 148 (376)
+|.+++|...|+ +|+|||+||++ ++...|..+++.|.+ +|+|+++|+||||.|+.+... ++.++
T Consensus 17 ~g~~l~~~~~g~-----~~~vv~lHG~~--~~~~~~~~~~~~L~~-----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 84 (302)
T 1mj5_A 17 KGRRMAYIDEGT-----GDPILFQHGNP--TSSYLWRNIMPHCAG-----LGRLIACDLIGMGDSDKLDPSGPERYAYAE 84 (302)
T ss_dssp TTEEEEEEEESC-----SSEEEEECCTT--CCGGGGTTTGGGGTT-----SSEEEEECCTTSTTSCCCSSCSTTSSCHHH
T ss_pred CCEEEEEEEcCC-----CCEEEEECCCC--CchhhhHHHHHHhcc-----CCeEEEEcCCCCCCCCCCCCCCcccccHHH
Confidence 489999999986 68999999999 999999999999988 699999999999999976555 89999
Q ss_pred HHHHHHHHHhCCCCCCCCCC-CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHh
Q 017180 149 MEKFVVDLINAPDSPVSSSE-SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRG 227 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (376)
+++++.+++++++ . ++++|+||||||.+++.+|.++|++|+++|+++|..... .. .... ......+..
T Consensus 85 ~~~~~~~~l~~l~------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~-~~-~~~~---~~~~~~~~~ 153 (302)
T 1mj5_A 85 HRDYLDALWEALD------LGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPI-EW-ADFP---EQDRDLFQA 153 (302)
T ss_dssp HHHHHHHHHHHTT------CTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCB-CG-GGSC---GGGHHHHHH
T ss_pred HHHHHHHHHHHhC------CCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCch-hh-hhhh---HHHHHHHHH
Confidence 9999999999996 5 889999999999999999999999999999999853211 00 0000 001111111
Q ss_pred hhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhcc-CCCchhHHHhhccCCCC------CcHH
Q 017180 228 TLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRK-GARYVPAAFLTGLLDPV------NSRE 300 (376)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~ 300 (376)
+. .+. ...... .....+...+.... ....+++....+......+ ........+........ ....
T Consensus 154 ~~-~~~-~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (302)
T 1mj5_A 154 FR-SQA-GEELVL---QDNVFVEQVLPGLI---LRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIAR 225 (302)
T ss_dssp HH-STT-HHHHHT---TTCHHHHTHHHHTS---SSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHH
T ss_pred Hh-ccc-hhhhhc---ChHHHHHHHHHhcC---cccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHH
Confidence 11 111 111111 01122222222111 1244555555444333222 11222222222211000 0122
Q ss_pred HHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcCC
Q 017180 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFEP 374 (376)
Q Consensus 301 ~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~~ 374 (376)
+..+.+.++ ++|+|+|+|++|.+++.+..+.+.+..++ +++++ ++ |+++.|+|+++++.|.+|+++....
T Consensus 226 ~~~~~l~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 296 (302)
T 1mj5_A 226 DYAGWLSES--PIPKLFINAEPGALTTGRMRDFCRTWPNQ-TEITV-AGAHFIQEDSPDEIGAAIAAFVRRLRPA 296 (302)
T ss_dssp HHHHHHTTC--CSCEEEEEEEECSSSSHHHHHHHTTCSSE-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHHSCC
T ss_pred HHHhhhhcc--CCCeEEEEeCCCCCCChHHHHHHHHhcCC-ceEEe-cCcCcccccCHHHHHHHHHHHHHhhccc
Confidence 345677888 99999999999999999999999998899 99999 87 9999999999999999999987653
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=242.82 Aligned_cols=273 Identities=15% Similarity=0.148 Sum_probs=181.7
Q ss_pred ccceEEeecCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC
Q 017180 63 TGNWQWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM 142 (376)
Q Consensus 63 ~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~ 142 (376)
...+.+...+++++++|...++.+. .+|+|||+||++ ++...|..++..|.++ ||+|+++|+||||.|+.+..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~vv~~hG~~--~~~~~~~~~~~~l~~~----g~~v~~~d~~G~G~s~~~~~ 92 (315)
T 4f0j_A 20 VHYLDFTSQGQPLSMAYLDVAPKKA-NGRTILLMHGKN--FCAGTWERTIDVLADA----GYRVIAVDQVGFCKSSKPAH 92 (315)
T ss_dssp CEEEEEEETTEEEEEEEEEECCSSC-CSCEEEEECCTT--CCGGGGHHHHHHHHHT----TCEEEEECCTTSTTSCCCSS
T ss_pred ceeEEEecCCCCeeEEEeecCCCCC-CCCeEEEEcCCC--CcchHHHHHHHHHHHC----CCeEEEeecCCCCCCCCCCc
Confidence 3444455566788888888765322 278999999999 9999999999999996 89999999999999996554
Q ss_pred -CCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhh
Q 017180 143 -DYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETR 221 (376)
Q Consensus 143 -~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~ 221 (376)
.++.+++++++.+++++++ .++++|+|||+||.+++.+|.++|++|+++|+++|.........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~---------- 156 (315)
T 4f0j_A 93 YQYSFQQLAANTHALLERLG------VARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKAL---------- 156 (315)
T ss_dssp CCCCHHHHHHHHHHHHHHTT------CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHH----------
T ss_pred cccCHHHHHHHHHHHHHHhC------CCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccc----------
Confidence 8999999999999999997 67899999999999999999999999999999998431110000
Q ss_pred hHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCC-CChHHHHHHHHHHhccCCCchhHH---HhhccCCCCC
Q 017180 222 YGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDN-VTPGIVESRYALTKRKGARYVPAA---FLTGLLDPVN 297 (376)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 297 (376)
.....................+.............. ........................ ........
T Consensus 157 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 228 (315)
T 4f0j_A 157 ------GVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQ-- 228 (315)
T ss_dssp ------TCCCCCHHHHHHHHTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHC--
T ss_pred ------cchhhhhHHHHhhcccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccc--
Confidence 000011111111111111222222222222211111 111111111111110000000000 00000000
Q ss_pred cHHHHHHHHhcccCCCcEEEEEeCCCCCCC----------------HHHHHHHhcccCCceEEEeCCC-CCCCCCChHHH
Q 017180 298 SREEFLQLFADLEGKLPLLVVSTEGSPRRS----------------KAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMV 360 (376)
Q Consensus 298 ~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~----------------~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~ 360 (376)
.....+.++ ++|+|+|+|++|.+++ .+..+.+.+..+++++++++++ |+++.++|+++
T Consensus 229 ---~~~~~l~~~--~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 303 (315)
T 4f0j_A 229 ---PVVYELDRL--QMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQIQAPERF 303 (315)
T ss_dssp ---CCGGGGGGC--CSCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHHHHSHHHH
T ss_pred ---hhhhhcccC--CCCeEEEEecCCCcCccccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchhhhCHHHH
Confidence 022346677 9999999999999999 7888888888899999999998 99999999999
Q ss_pred HHHHHHHHHhh
Q 017180 361 AQELYQFLQQT 371 (376)
Q Consensus 361 ~~~i~~fl~~~ 371 (376)
++.|.+||++.
T Consensus 304 ~~~i~~fl~~~ 314 (315)
T 4f0j_A 304 HQALLEGLQTQ 314 (315)
T ss_dssp HHHHHHHHCC-
T ss_pred HHHHHHHhccC
Confidence 99999999753
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=241.18 Aligned_cols=254 Identities=10% Similarity=0.098 Sum_probs=173.8
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
+|.+++|...|+++ +|+|||+||++ ++...|..+++.|.+ +|+|+++|+||||.|+.+...++.+++++|
T Consensus 7 ~g~~l~~~~~g~~~---~~~vv~lHG~~--~~~~~~~~~~~~L~~-----~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~ 76 (264)
T 3ibt_A 7 NGTLMTYSESGDPH---APTLFLLSGWC--QDHRLFKNLAPLLAR-----DFHVICPDWRGHDAKQTDSGDFDSQTLAQD 76 (264)
T ss_dssp TTEECCEEEESCSS---SCEEEEECCTT--CCGGGGTTHHHHHTT-----TSEEEEECCTTCSTTCCCCSCCCHHHHHHH
T ss_pred CCeEEEEEEeCCCC---CCeEEEEcCCC--CcHhHHHHHHHHHHh-----cCcEEEEccccCCCCCCCccccCHHHHHHH
Confidence 48899999999854 78999999999 999999999999987 799999999999999987788999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhC-CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN-LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~-p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
+.+++++++ .++++|+||||||.+++.+|.++ |++|+++|+++|.. ... ......+......
T Consensus 77 ~~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~-~~~----------~~~~~~~~~~~~~ 139 (264)
T 3ibt_A 77 LLAFIDAKG------IRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL-QPH----------PGFWQQLAEGQHP 139 (264)
T ss_dssp HHHHHHHTT------CCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS-SCC----------HHHHHHHHHTTCT
T ss_pred HHHHHHhcC------CCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC-CcC----------hhhcchhhcccCh
Confidence 999999997 67899999999999999999999 99999999999853 110 1111111111111
Q ss_pred CchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccC
Q 017180 232 PGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEG 311 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 311 (376)
....... ...+..++. ....++..+.+........ ...+..................+.+.++
T Consensus 140 ~~~~~~~-------~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i-- 202 (264)
T 3ibt_A 140 TEYVAGR-------QSFFDEWAE-------TTDNADVLNHLRNEMPWFH-GEMWQRACREIEANYRTWGSPLDRMDSL-- 202 (264)
T ss_dssp TTHHHHH-------HHHHHHHHT-------TCCCHHHHHHHHHTGGGSC-HHHHHHHHHHHHHHHHHHSSHHHHHHTC--
T ss_pred hhHHHHH-------HHHHHHhcc-------cCCcHHHHHHHHHhhhhcc-chhHHHHHHHhccchhhccchhhccccc--
Confidence 1000000 111111111 0123333333332222111 0101111000000000000023667888
Q ss_pred CCcEEEEEeC--CCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 312 KLPLLVVSTE--GSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 312 ~~Pvlii~G~--~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
++|+++|+|. .|...+.+..+.+.+..+++++++++++ |+++.|+|+++++.|.+||++
T Consensus 203 ~~P~lii~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 264 (264)
T 3ibt_A 203 PQKPEICHIYSQPLSQDYRQLQLEFAAGHSWFHPRHIPGRTHFPSLENPVAVAQAIREFLQA 264 (264)
T ss_dssp SSCCEEEEEECCSCCHHHHHHHHHHHHHCTTEEEEECCCSSSCHHHHCHHHHHHHHHHHTC-
T ss_pred CCCeEEEEecCCccchhhHHHHHHHHHhCCCceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 9999999764 4444456777888888999999999998 999999999999999999863
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=242.87 Aligned_cols=250 Identities=13% Similarity=0.114 Sum_probs=160.2
Q ss_pred eEEEEecccCCCCCCC-cEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHH
Q 017180 76 NIYYEKHERESPDPSK-NILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVV 154 (376)
Q Consensus 76 ~l~y~~~g~~~~~~~~-~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~ 154 (376)
+++|...|+ ++ +|||+||++ ++...|..+++.|.+ +|+|+++|+||||.|+.+ ..++.+++++++.
T Consensus 3 ~l~~~~~G~-----g~~~vvllHG~~--~~~~~w~~~~~~L~~-----~~~vi~~Dl~G~G~S~~~-~~~~~~~~~~~l~ 69 (258)
T 1m33_A 3 NIWWQTKGQ-----GNVHLVLLHGWG--LNAEVWRCIDEELSS-----HFTLHLVDLPGFGRSRGF-GALSLADMAEAVL 69 (258)
T ss_dssp CCCEEEECC-----CSSEEEEECCTT--CCGGGGGGTHHHHHT-----TSEEEEECCTTSTTCCSC-CCCCHHHHHHHHH
T ss_pred ceEEEEecC-----CCCeEEEECCCC--CChHHHHHHHHHhhc-----CcEEEEeeCCCCCCCCCC-CCcCHHHHHHHHH
Confidence 567888886 56 899999999 999999999999987 899999999999999976 5788888776554
Q ss_pred HHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCch
Q 017180 155 DLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGV 234 (376)
Q Consensus 155 ~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (376)
+.+ .++++|+||||||.+|+.+|.++|++|+++|++++........ ....... .....+.
T Consensus 70 ---~~l-------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~---~~~~~~~----- 129 (258)
T 1m33_A 70 ---QQA-------PDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARD--EWPGIKP---DVLAGFQ----- 129 (258)
T ss_dssp ---TTS-------CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBT--TBCSBCH---HHHHHHH-----
T ss_pred ---HHh-------CCCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccc--cccCCCH---HHHHHHH-----
Confidence 444 2679999999999999999999999999999998742110000 0000000 0000000
Q ss_pred hhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhcc-CCC-chhHHHhhccCCCCCcHHHHHHHHhcccCC
Q 017180 235 GWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRK-GAR-YVPAAFLTGLLDPVNSREEFLQLFADLEGK 312 (376)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 312 (376)
..+.. .....+..+....... .....+..+......... ... .............. ..+.+.++ +
T Consensus 130 -~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~i--~ 196 (258)
T 1m33_A 130 -QQLSD---DQQRTVERFLALQTMG--TETARQDARALKKTVLALPMPEVDVLNGGLEILKTVD-----LRQPLQNV--S 196 (258)
T ss_dssp -HHHHH---HHHHHHHHHHHTTSTT--STTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCC-----CTTGGGGC--C
T ss_pred -HHHhc---cHHHHHHHHHHHHhcC--CccchhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCC-----HHHHHhhC--C
Confidence 00000 0011112111111111 011111222221111111 110 01111100000000 22356777 9
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 313 LPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 313 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
+|+++|+|++|.+++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+||.+.
T Consensus 197 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 256 (258)
T 1m33_A 197 MPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQRV 256 (258)
T ss_dssp SCEEEEEETTCSSSCGGGCC-CTTTCTTCEEEEETTCCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred CCEEEEeecCCCCCCHHHHHHHHHhCccceEEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 9999999999999998888888888899999999998 9999999999999999999764
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-33 Score=240.38 Aligned_cols=255 Identities=11% Similarity=0.012 Sum_probs=173.2
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVME 150 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~ 150 (376)
+|.+++|...|+ +|+|||+||++ ++...|..+++.|.+ ||+|+++|+||||.|+.+. ..++.++++
T Consensus 11 ~~~~~~y~~~g~-----~~~vv~~HG~~--~~~~~~~~~~~~L~~-----~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 78 (278)
T 3oos_A 11 PRGKFEYFLKGE-----GPPLCVTHLYS--EYNDNGNTFANPFTD-----HYSVYLVNLKGCGNSDSAKNDSEYSMTETI 78 (278)
T ss_dssp TTEEEEEEEECS-----SSEEEECCSSE--ECCTTCCTTTGGGGG-----TSEEEEECCTTSTTSCCCSSGGGGSHHHHH
T ss_pred CCceEEEEecCC-----CCeEEEEcCCC--cchHHHHHHHHHhhc-----CceEEEEcCCCCCCCCCCCCcccCcHHHHH
Confidence 377999999985 78999999999 999999999999988 8999999999999999653 478999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccC-----CCCchhhhhHHH
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFG-----RDSSMETRYGLL 225 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~-----~~~~~~~~~~~~ 225 (376)
+++.+++++++ .++++++|||+||.+++.+|.++|++|+++|+++|........... ............
T Consensus 79 ~~~~~~~~~l~------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (278)
T 3oos_A 79 KDLEAIREALY------INKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIM 152 (278)
T ss_dssp HHHHHHHHHTT------CSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHH
T ss_pred HHHHHHHHHhC------CCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHH
Confidence 99999999997 6789999999999999999999999999999999854211000000 000001111111
Q ss_pred HhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchh---HHHhh--ccCCCCCcHH
Q 017180 226 RGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVP---AAFLT--GLLDPVNSRE 300 (376)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~ 300 (376)
.......... ... ........... ...++....+. ......... ...+. .....
T Consensus 153 ~~~~~~~~~~-~~~------~~~~~~~~~~~------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~----- 211 (278)
T 3oos_A 153 NALNDDSTVQ-EER------KALSREWALMS------FYSEEKLEEAL---KLPNSGKTVGNRLNYFRQVEYKDY----- 211 (278)
T ss_dssp HHHTCTTSCH-HHH------HHHHHHHHHHH------CSCHHHHHHHT---TSCCCCEECHHHHHHHHHTTGGGC-----
T ss_pred HhhcccccCc-hHH------HHHHHHHhhcc------cCCcHHHHHHh---hccccchhHHHHHHHhhhcccccc-----
Confidence 1111110000 000 00000000000 11122221111 111111111 11111 11111
Q ss_pred HHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHH
Q 017180 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFL 368 (376)
Q Consensus 301 ~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl 368 (376)
+..+.+.++ ++|+++|+|++|.+++.+..+.+.+..+++++++++++ |+++.|+|+++++.|.+||
T Consensus 212 ~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 212 DVRQKLKFV--KIPSFIYCGKHDVQCPYIFSCEIANLIPNATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp BCHHHHTTC--CSCEEEEEETTCSSSCHHHHHHHHHHSTTEEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred cHHHHHhCC--CCCEEEEEeccCCCCCHHHHHHHHhhCCCcEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 144567788 99999999999999999999999988899999999998 9999999999999999985
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-33 Score=246.59 Aligned_cols=269 Identities=15% Similarity=0.181 Sum_probs=169.9
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC--C--CCCCHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP--K--MDYNADV 148 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~--~--~~~~~~~ 148 (376)
+|.+++|...|+ +|+|||+||++ ++...|..+++.|.+. ||+||++|+||||.|+.+ . ..++.++
T Consensus 19 ~g~~l~y~~~G~-----g~~vvllHG~~--~~~~~w~~~~~~L~~~----g~~via~Dl~G~G~S~~~~~~~~~~~~~~~ 87 (328)
T 2cjp_A 19 NGLNMHLAELGE-----GPTILFIHGFP--ELWYSWRHQMVYLAER----GYRAVAPDLRGYGDTTGAPLNDPSKFSILH 87 (328)
T ss_dssp TTEEEEEEEECS-----SSEEEEECCTT--CCGGGGHHHHHHHHTT----TCEEEEECCTTSTTCBCCCTTCGGGGSHHH
T ss_pred CCcEEEEEEcCC-----CCEEEEECCCC--CchHHHHHHHHHHHHC----CcEEEEECCCCCCCCCCcCcCCcccccHHH
Confidence 488999999984 78999999999 9999999999999875 899999999999999865 2 4689999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHH--
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLR-- 226 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 226 (376)
+++|+.+++++++. ..++++|+||||||.+|+.+|.++|++|+++|++++......+ .............
T Consensus 88 ~a~dl~~~l~~l~~----~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~----~~~~~~~~~~~~~~~ 159 (328)
T 2cjp_A 88 LVGDVVALLEAIAP----NEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNP----KMNVVEGLKAIYGED 159 (328)
T ss_dssp HHHHHHHHHHHHCT----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCS----SCCHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhcC----CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcccc----cCChHHHHHhhcccc
Confidence 99999999999841 1578999999999999999999999999999999864311000 0000000000000
Q ss_pred ---hhhccCchhhHHhhhhhccHHHHHHHHH---hc--------ccCC--------CCCCChHHHHHHHHHHhccCCCch
Q 017180 227 ---GTLRAPGVGWMMYNMLVSNEKAIQSQYK---SH--------VYSN--------PDNVTPGIVESRYALTKRKGARYV 284 (376)
Q Consensus 227 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 284 (376)
..+..+.......... .....++..+. .. .+.. +....++..+.+.......+. ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 237 (328)
T 2cjp_A 160 HYISRFQVPGEIEAEFAPI-GAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGF-TG 237 (328)
T ss_dssp BHHHHTSSTTHHHHHHHHH-CHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHHHHHHHHHHCS-HH
T ss_pred hHHHhhhCCCcHHHHhhcc-CHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHHHHHHhcccCC-cc
Confidence 0001111000000000 01122222221 00 0000 001122222222222211111 00
Q ss_pred hHHHhhccCCCCCcHHHHH----HHHhcccCCCcEEEEEeCCCCCCCHH----HH--HHHhcccCCc-eEEEeCCC-CCC
Q 017180 285 PAAFLTGLLDPVNSREEFL----QLFADLEGKLPLLVVSTEGSPRRSKA----EM--EALKGAKGVT-KFVEVPGA-LLP 352 (376)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~Pvlii~G~~D~~~~~~----~~--~~~~~~~~~~-~~~~~~~~-H~~ 352 (376)
...++... ..... ..+.++ ++|+|+|+|++|.+++.+ .. +.+.+..|++ ++++++++ |++
T Consensus 238 ~~~~~~~~------~~~~~~~~~~~~~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~gH~~ 309 (328)
T 2cjp_A 238 AVNYYRAL------PINWELTAPWTGAQV--KVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAHFV 309 (328)
T ss_dssp HHHHHHTH------HHHHHHTGGGTTCCC--CSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHSTTBCCCEEETTCCSCH
T ss_pred hHHHHHhc------ccchhhhhhccCCcc--CCCEEEEEeCCcccccCcchhhhhhhhhHHHHhcCCeeEEEcCCCCCCc
Confidence 00110000 00011 024567 999999999999988853 22 5667778898 89999998 999
Q ss_pred CCCChHHHHHHHHHHHHh
Q 017180 353 QEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 353 ~~e~pe~~~~~i~~fl~~ 370 (376)
++|+|+++++.|.+||++
T Consensus 310 ~~e~p~~~~~~i~~fl~~ 327 (328)
T 2cjp_A 310 SQERPHEISKHIYDFIQK 327 (328)
T ss_dssp HHHSHHHHHHHHHHHHTT
T ss_pred chhCHHHHHHHHHHHHHh
Confidence 999999999999999975
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-32 Score=234.46 Aligned_cols=238 Identities=13% Similarity=0.124 Sum_probs=168.0
Q ss_pred CceeEEEEecccCC-CCCCCcEEEecCCCCCcc--chHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHH
Q 017180 73 NSINIYYEKHERES-PDPSKNILMIPTISDVST--VEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVM 149 (376)
Q Consensus 73 ~g~~l~y~~~g~~~-~~~~~~vvllHG~~~~~~--~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~ 149 (376)
+|.+|++..+.+.. .+++|+|||+||++ ++ ...|..+++.|.+. ||+|+++|+||||.|+.+...++.+.+
T Consensus 9 ~g~~l~~~~~~p~~~~~~~p~vvl~HG~~--~~~~~~~~~~~~~~l~~~----g~~vi~~D~~G~G~S~~~~~~~~~~~~ 82 (251)
T 2wtm_A 9 DGIKLNAYLDMPKNNPEKCPLCIIIHGFT--GHSEERHIVAVQETLNEI----GVATLRADMYGHGKSDGKFEDHTLFKW 82 (251)
T ss_dssp TTEEEEEEEECCTTCCSSEEEEEEECCTT--CCTTSHHHHHHHHHHHHT----TCEEEEECCTTSTTSSSCGGGCCHHHH
T ss_pred CCcEEEEEEEccCCCCCCCCEEEEEcCCC--cccccccHHHHHHHHHHC----CCEEEEecCCCCCCCCCccccCCHHHH
Confidence 48888887776542 12267899999999 88 88999999999886 899999999999999865556889999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhh
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (376)
++|+.++++.+.... ..++++|+||||||.+++.+|.++|++|+++|+++|... . . ........
T Consensus 83 ~~d~~~~~~~l~~~~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~--~----------~--~~~~~~~~ 146 (251)
T 2wtm_A 83 LTNILAVVDYAKKLD--FVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAM--I----------P--EIARTGEL 146 (251)
T ss_dssp HHHHHHHHHHHTTCT--TEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTT--H----------H--HHHHHTEE
T ss_pred HHHHHHHHHHHHcCc--ccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHH--h----------H--HHHhhhhh
Confidence 999998887774211 135899999999999999999999999999999988420 0 0 00000000
Q ss_pred ccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcc
Q 017180 230 RAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADL 309 (376)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 309 (376)
.. ..+. ......... ..........+........ ..+.+.++
T Consensus 147 ~~------------------------~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-----~~~~~~~i 188 (251)
T 2wtm_A 147 LG------------------------LKFD-PENIPDELD--------AWDGRKLKGNYVRVAQTIR-----VEDFVDKY 188 (251)
T ss_dssp TT------------------------EECB-TTBCCSEEE--------ETTTEEEETHHHHHHTTCC-----HHHHHHHC
T ss_pred cc------------------------ccCC-chhcchHHh--------hhhccccchHHHHHHHccC-----HHHHHHhc
Confidence 00 0000 000000000 0000000000000000111 44566778
Q ss_pred cCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 310 EGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 310 ~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
++|+|+|+|++|.+++.+..+.+.+..+++++++++++ |++ .|+|+++++.|.+||++.++
T Consensus 189 --~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 189 --TKPVLIVHGDQDEAVPYEASVAFSKQYKNCKLVTIPGDTHCY-DHHLELVTEAVKEFMLEQIA 250 (251)
T ss_dssp --CSCEEEEEETTCSSSCHHHHHHHHHHSSSEEEEEETTCCTTC-TTTHHHHHHHHHHHHHHHHC
T ss_pred --CCCEEEEEeCCCCCcChHHHHHHHHhCCCcEEEEECCCCccc-chhHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999888899999999998 999 99999999999999998754
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-32 Score=232.82 Aligned_cols=248 Identities=18% Similarity=0.186 Sum_probs=171.8
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHH
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVME 150 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 150 (376)
..+|.+++|...|+ +|+|||+||++ ++...|..+++.|.+ ||+|+++|+||||.|+.+. .++.++++
T Consensus 9 ~~~g~~l~~~~~g~-----~~~vv~lHG~~--~~~~~~~~~~~~l~~-----~~~vi~~d~~G~G~S~~~~-~~~~~~~~ 75 (262)
T 3r0v_A 9 SSDGTPIAFERSGS-----GPPVVLVGGAL--STRAGGAPLAERLAP-----HFTVICYDRRGRGDSGDTP-PYAVEREI 75 (262)
T ss_dssp CTTSCEEEEEEEEC-----SSEEEEECCTT--CCGGGGHHHHHHHTT-----TSEEEEECCTTSTTCCCCS-SCCHHHHH
T ss_pred cCCCcEEEEEEcCC-----CCcEEEECCCC--cChHHHHHHHHHHhc-----CcEEEEEecCCCcCCCCCC-CCCHHHHH
Confidence 34588999999986 67899999999 999999999999995 9999999999999999664 78999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
+|+.+++++++ ++++++|||+||.+++.+|.++| +|+++|+++|........... .......+.....
T Consensus 76 ~~~~~~~~~l~-------~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 143 (262)
T 3r0v_A 76 EDLAAIIDAAG-------GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPV----PPDYQTRLDALLA 143 (262)
T ss_dssp HHHHHHHHHTT-------SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCC----CTTHHHHHHHHHH
T ss_pred HHHHHHHHhcC-------CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchh----hhHHHHHHHHHhh
Confidence 99999999983 68999999999999999999999 999999999854221111000 0111111111111
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHh----ccCCCch-hHHHhhccCCCCCcHHHHHHH
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTK----RKGARYV-PAAFLTGLLDPVNSREEFLQL 305 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 305 (376)
... ....+..+.. ... ..+++..+.+..... ....... .......... . ..+.
T Consensus 144 ~~~-----------~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~ 201 (262)
T 3r0v_A 144 EGR-----------RGDAVTYFMT-EGV----GVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNT-I-----PTAR 201 (262)
T ss_dssp TTC-----------HHHHHHHHHH-HTS----CCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSC-C-----CHHH
T ss_pred ccc-----------hhhHHHHHhh-ccc----CCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCC-C-----CHHH
Confidence 100 0122221111 111 233333333321100 0000000 0000111000 0 2456
Q ss_pred HhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 306 FADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 306 ~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
++++ ++|+++|+|++|.+++.+..+.+.+..+++++++++++ | +++|+++++.|.+||++
T Consensus 202 l~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH---~~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 202 FASI--SIPTLVMDGGASPAWIRHTAQELADTIPNARYVTLENQTH---TVAPDAIAPVLVEFFTR 262 (262)
T ss_dssp HTTC--CSCEEEEECTTCCHHHHHHHHHHHHHSTTEEEEECCCSSS---SCCHHHHHHHHHHHHC-
T ss_pred cCcC--CCCEEEEeecCCCCCCHHHHHHHHHhCCCCeEEEecCCCc---ccCHHHHHHHHHHHHhC
Confidence 7788 99999999999999999999999999999999999998 9 47899999999999964
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-32 Score=240.25 Aligned_cols=260 Identities=14% Similarity=0.145 Sum_probs=164.7
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEK 151 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~~~ 151 (376)
+|.+++|...|+++. +++|||+||++ ++...|...+..+.+. ||+|+++|+||||.|+.+. ..++.+++++
T Consensus 13 ~g~~l~~~~~g~~~~--~~~vvllHG~~--~~~~~~~~~~~~l~~~----g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 84 (293)
T 1mtz_A 13 NGIYIYYKLCKAPEE--KAKLMTMHGGP--GMSHDYLLSLRDMTKE----GITVLFYDQFGCGRSEEPDQSKFTIDYGVE 84 (293)
T ss_dssp TTEEEEEEEECCSSC--SEEEEEECCTT--TCCSGGGGGGGGGGGG----TEEEEEECCTTSTTSCCCCGGGCSHHHHHH
T ss_pred CCEEEEEEEECCCCC--CCeEEEEeCCC--CcchhHHHHHHHHHhc----CcEEEEecCCCCccCCCCCCCcccHHHHHH
Confidence 388999999987431 27899999986 5554444444445554 8999999999999999664 3489999999
Q ss_pred HHHHHHhCC-CCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 152 FVVDLINAP-DSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 152 ~l~~~l~~l-~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
|+.++++++ + .++++|+||||||.+|+.+|.++|++|+++|+++|... .............
T Consensus 85 dl~~~~~~l~~------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~------------~~~~~~~~~~~~~ 146 (293)
T 1mtz_A 85 EAEALRSKLFG------NEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSS------------VPLTVKEMNRLID 146 (293)
T ss_dssp HHHHHHHHHHT------TCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSB------------HHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC------CCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccC------------hHHHHHHHHHHHH
Confidence 999999998 7 57899999999999999999999999999999987421 0000000000000
Q ss_pred -cCc-hhhHHhhhh----hccH---HHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHh--------hccC
Q 017180 231 -APG-VGWMMYNML----VSNE---KAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFL--------TGLL 293 (376)
Q Consensus 231 -~~~-~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 293 (376)
.+. ....+.... .... ..+..+...... ......+............ ..+.... ....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 221 (293)
T 1mtz_A 147 ELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLL-RSEDWPPEVLKSLEYAERR----NVYRIMNGPNEFTITGTIK 221 (293)
T ss_dssp TSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTS-CSSCCCHHHHHHHHHHHHS----SHHHHHTCSBTTBCCSTTT
T ss_pred hcCHHHHHHHHHhhccCCcChHHHHHHHHHHHHhhcc-cccCchHHHHHhHhhhccc----hhhhhccCcceeccccccc
Confidence 000 000000000 0000 011111111110 0011222222211111000 0000000 0000
Q ss_pred CCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 294 DPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 294 ~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
... ..+.+.++ ++|+|+|+|++| .++++..+.+.+..+++++++++++ |+++.|+|+++++.|.+||++.
T Consensus 222 ~~~-----~~~~l~~i--~~P~lii~G~~D-~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 222 DWD-----ITDKISAI--KIPTLITVGEYD-EVTPNVARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLSDFILKH 292 (293)
T ss_dssp TCB-----CTTTGGGC--CSCEEEEEETTC-SSCHHHHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred CCC-----hhhhhccC--CCCEEEEeeCCC-CCCHHHHHHHHHhCCCceEEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 111 23456778 999999999999 6777888888888899999999998 9999999999999999999864
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-32 Score=234.93 Aligned_cols=243 Identities=14% Similarity=0.029 Sum_probs=159.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+++|||+||++ .+...|+.+++.|.+. ||+|+++|+||||.|+.+ ...++++++++|+.+++++++ ..
T Consensus 3 ~~~vvllHG~~--~~~~~w~~~~~~L~~~----g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~-----~~ 71 (257)
T 3c6x_A 3 FAHFVLIHTIC--HGAWIWHKLKPLLEAL----GHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALP-----PG 71 (257)
T ss_dssp CCEEEEECCTT--CCGGGGTTHHHHHHHT----TCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHTSC-----TT
T ss_pred CCcEEEEcCCc--cCcCCHHHHHHHHHhC----CCEEEEeCCCCCCCCCCCcccccCHHHHHHHHHHHHHhcc-----cc
Confidence 57899999999 9999999999999875 899999999999999853 346899999999999999994 24
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHH--h-------
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMM--Y------- 239 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------- 239 (376)
++++||||||||.+++.+|.++|++|+++|++++..... .... ........... . ....... +
T Consensus 72 ~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~-----~~~~-~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 143 (257)
T 3c6x_A 72 EKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDT-----EHCP-SYVVDKLMEVF-P-DWKDTTYFTYTKDGKEI 143 (257)
T ss_dssp CCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCS-----SSCT-THHHHHHHHHS-C-CCTTCEEEEEEETTEEE
T ss_pred CCeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCC-----CCcc-hhHHHHHhhcC-c-chhhhhhhhccCCCCcc
Confidence 789999999999999999999999999999998742110 0000 00000111100 0 0000000 0
Q ss_pred hhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEE
Q 017180 240 NMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVS 319 (376)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~ 319 (376)
......+..+.. ..+. ....+... .......+...... .+... .... ...+ . ++|+|+|+
T Consensus 144 ~~~~~~~~~~~~----~~~~---~~~~~~~~-~~~~~~~~~~~~~~-~~~~~-~~~~------~~~~--~--~~P~l~i~ 203 (257)
T 3c6x_A 144 TGLKLGFTLLRE----NLYT---LCGPEEYE-LAKMLTRKGSLFQN-ILAKR-PFFT------KEGY--G--SIKKIYVW 203 (257)
T ss_dssp EEEECCHHHHHH----HTST---TSCHHHHH-HHHHHCCCBCCCHH-HHHHS-CCCC------TTTG--G--GSCEEEEE
T ss_pred ccccccHHHHHH----HHhc---CCCHHHHH-HHHHhcCCCccchh-hhccc-cccC------hhhc--C--cccEEEEE
Confidence 000001112111 1111 11112111 11111111111111 11000 0000 0011 1 57999999
Q ss_pred eCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 320 TEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 320 G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
|++|.++|.+..+.+.+..+++++++++++ |++++|+|+++++.|.+|+++.
T Consensus 204 G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 204 TDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTKTKEIAEILQEVADTY 256 (257)
T ss_dssp CTTCSSSCHHHHHHHHHHSCCSEEEECCSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred eCCCcccCHHHHHHHHHHCCCCeEEEeCCCCCCcccCCHHHHHHHHHHHHHhc
Confidence 999999999999999988999999999998 9999999999999999999763
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-32 Score=234.45 Aligned_cols=247 Identities=11% Similarity=0.037 Sum_probs=160.0
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+++|||+||++ .+...|+.+++.|++. ||+||++|+||||.|+.+ ...++++++++|+.+++++++ ..
T Consensus 4 ~~~vvllHG~~--~~~~~w~~~~~~L~~~----g~rVia~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~-----~~ 72 (273)
T 1xkl_A 4 GKHFVLVHGAC--HGGWSWYKLKPLLEAA----GHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLS-----AD 72 (273)
T ss_dssp CCEEEEECCTT--CCGGGGTTHHHHHHHT----TCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSC-----SS
T ss_pred CCeEEEECCCC--CCcchHHHHHHHHHhC----CCEEEEecCCCCCCCccCcccccCHHHHHHHHHHHHHHhc-----cC
Confidence 67899999999 9999999999999865 899999999999999854 346899999999999999995 24
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHH--h-------
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMM--Y------- 239 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------- 239 (376)
++++||||||||.+++.+|.++|++|+++|++++...... ... ...............+..... +
T Consensus 73 ~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (273)
T 1xkl_A 73 EKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSV----HNS--SFVLEQYNERTPAENWLDTQFLPYGSPEEPL 146 (273)
T ss_dssp SCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSS----SCT--THHHHHHHHTSCTTTTTTCEEEECSCTTSCC
T ss_pred CCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCC----CcH--HHHHHHhhccCChhhHHHHHHhhccCCCCCc
Confidence 7899999999999999999999999999999987421100 000 000001111000000000000 0
Q ss_pred hhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEE
Q 017180 240 NMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVS 319 (376)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~ 319 (376)
......+..+.. ..+. ....+... .......+..... ..+... .... .. ... ++|+++|+
T Consensus 147 ~~~~~~~~~~~~----~~~~---~~~~~~~~-~~~~~~~~~~~~~-~~~~~~-~~~~------~~--~~~--~~P~l~i~ 206 (273)
T 1xkl_A 147 TSMFFGPKFLAH----KLYQ---LCSPEDLA-LASSLVRPSSLFM-EDLSKA-KYFT------DE--RFG--SVKRVYIV 206 (273)
T ss_dssp EEEECCHHHHHH----HTST---TSCHHHHH-HHHHHCCCBCCCH-HHHHHC-CCCC------TT--TGG--GSCEEEEE
T ss_pred cccccCHHHHHH----Hhhc---cCCHHHHH-HHHHhcCCCchhh-hhhhcc-cccc------hh--hhC--CCCeEEEE
Confidence 000001111111 1111 11111111 1111111111110 010000 0000 00 012 67999999
Q ss_pred eCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 320 TEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 320 G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
|++|.+++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+|+++...
T Consensus 207 G~~D~~~p~~~~~~~~~~~p~~~~~~i~~aGH~~~~e~P~~~~~~i~~fl~~~~~ 261 (273)
T 1xkl_A 207 CTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAMLCEPQKLCASLLEIAHKYNM 261 (273)
T ss_dssp ETTCTTTTHHHHHHHHHHHCCSEEEEETTCCSCHHHHSHHHHHHHHHHHHHHCC-
T ss_pred eCCccCCCHHHHHHHHHhCCCCeEEEeCCCCCCchhcCHHHHHHHHHHHHHHhcc
Confidence 999999999999999888999999999998 999999999999999999987643
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=242.14 Aligned_cols=256 Identities=12% Similarity=0.059 Sum_probs=173.6
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHh-hhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQ-RVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK 151 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~-~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 151 (376)
+|.+++|...|+ +|+|||+||++ ++...|..++..|.+ . ||+|+++|+||||.|+.+.. ++.+++++
T Consensus 9 ~g~~l~y~~~g~-----~~~vv~lhG~~--~~~~~~~~~~~~l~~~~----g~~v~~~d~~G~G~s~~~~~-~~~~~~~~ 76 (272)
T 3fsg_A 9 TRSNISYFSIGS-----GTPIIFLHGLS--LDKQSTCLFFEPLSNVG----QYQRIYLDLPGMGNSDPISP-STSDNVLE 76 (272)
T ss_dssp CTTCCEEEEECC-----SSEEEEECCTT--CCHHHHHHHHTTSTTST----TSEEEEECCTTSTTCCCCSS-CSHHHHHH
T ss_pred cCCeEEEEEcCC-----CCeEEEEeCCC--CcHHHHHHHHHHHhccC----ceEEEEecCCCCCCCCCCCC-CCHHHHHH
Confidence 388999999985 78999999999 999999999988886 4 89999999999999996655 99999999
Q ss_pred HHHHHHhC-CCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 152 FVVDLINA-PDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 152 ~l~~~l~~-l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
++.+++++ ++ .++++|+||||||.+++.+|.++|++|+++|+++|................ ...
T Consensus 77 ~~~~~l~~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~---------~~~ 141 (272)
T 3fsg_A 77 TLIEAIEEIIG------ARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHIN---------ILE 141 (272)
T ss_dssp HHHHHHHHHHT------TCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCC---------EEC
T ss_pred HHHHHHHHHhC------CCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchh---------hhh
Confidence 99999999 65 688999999999999999999999999999999986421110000000000 000
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHh---ccCCCchhHHHhhccCCCCCcHHHHHHHHh
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTK---RKGARYVPAAFLTGLLDPVNSREEFLQLFA 307 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (376)
....... . ......+..... ...+.....+..... ..........+... .... ......+.
T Consensus 142 ~~~~~~~-~------~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~ 205 (272)
T 3fsg_A 142 EDINPVE-N------KEYFADFLSMNV-----IINNQAWHDYQNLIIPGLQKEDKTFIDQLQNN-YSFT---FEEKLKNI 205 (272)
T ss_dssp SCCCCCT-T------GGGHHHHHHHCS-----EESHHHHHHHHHHTHHHHHHCCHHHHHHHTTS-CSCT---THHHHTTC
T ss_pred hhhhccc-C------HHHHHHHHHHhc-----cCCCchhHHHHHHhhhhhhhccHHHHHHHhhh-cCCC---hhhhhhhc
Confidence 0000000 0 000000000000 011111111111000 00000111111111 1111 01222446
Q ss_pred cccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 308 DLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 308 ~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
++ ++|+++|+|++|.+++.+..+.+.+..+++++++++++ |+++.|+|+++++.|.+||++...
T Consensus 206 ~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 270 (272)
T 3fsg_A 206 NY--QFPFKIMVGRNDQVVGYQEQLKLINHNENGEIVLLNRTGHNLMIDQREAVGFHFDLFLDELNS 270 (272)
T ss_dssp CC--SSCEEEEEETTCTTTCSHHHHHHHTTCTTEEEEEESSCCSSHHHHTHHHHHHHHHHHHHHHHC
T ss_pred cC--CCCEEEEEeCCCCcCCHHHHHHHHHhcCCCeEEEecCCCCCchhcCHHHHHHHHHHHHHHhhc
Confidence 77 99999999999999999999999999999999999998 999999999999999999998753
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-32 Score=236.19 Aligned_cols=257 Identities=12% Similarity=0.100 Sum_probs=175.3
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhH-HHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWR-LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK 151 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~-~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 151 (376)
+|.+++|...|+ +|+|||+||++ ++...|. .++..|.+. ||+|+++|+||||.|+.+ ..++.+++++
T Consensus 31 ~~~~l~y~~~g~-----~~~vv~lHG~~--~~~~~~~~~~~~~l~~~----g~~vi~~D~~G~G~s~~~-~~~~~~~~~~ 98 (293)
T 3hss_A 31 RVINLAYDDNGT-----GDPVVFIAGRG--GAGRTWHPHQVPAFLAA----GYRCITFDNRGIGATENA-EGFTTQTMVA 98 (293)
T ss_dssp CEEEEEEEEECS-----SEEEEEECCTT--CCGGGGTTTTHHHHHHT----TEEEEEECCTTSGGGTTC-CSCCHHHHHH
T ss_pred ccceEEEEEcCC-----CCEEEEECCCC--CchhhcchhhhhhHhhc----CCeEEEEccCCCCCCCCc-ccCCHHHHHH
Confidence 488999999995 78999999999 9999998 688888665 999999999999999855 4689999999
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
++.+++++++ .++++|+|||+||.+++.+|.++|++|+++|+++|..... ................
T Consensus 99 ~~~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~--------~~~~~~~~~~~~~~~~ 164 (293)
T 3hss_A 99 DTAALIETLD------IAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLD--------RARQFFNKAEAELYDS 164 (293)
T ss_dssp HHHHHHHHHT------CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCC--------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC------CCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCC--------hhhhHHHHHHHHHHhh
Confidence 9999999997 6789999999999999999999999999999999843110 0000000000000000
Q ss_pred C-chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhcc--CCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 232 P-GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRK--GARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 232 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
. ......... ..... .+.... ................. ................. ....+.+
T Consensus 165 ~~~~~~~~~~~----~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~ 229 (293)
T 3hss_A 165 GVQLPPTYDAR----ARLLE-NFSRKT-----LNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTN-----RLPAYRN 229 (293)
T ss_dssp TCCCCHHHHHH----HHHHH-HSCHHH-----HTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSC-----CHHHHTT
T ss_pred cccchhhHHHH----HHHhh-hccccc-----ccccccHHHHHHHHhhccccccHHHHhHhhhccccc-----hHHHHhh
Confidence 0 000000000 00000 000000 01111111111111111 11111122221111111 4556788
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
+ ++|+++|+|++|.+++.+..+.+.+..+++++++++++ |+++.|+|+++++.|.+||++..
T Consensus 230 i--~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~ 292 (293)
T 3hss_A 230 I--AAPVLVIGFADDVVTPPYLGREVADALPNGRYLQIPDAGHLGFFERPEAVNTAMLKFFASVK 292 (293)
T ss_dssp C--CSCEEEEEETTCSSSCHHHHHHHHHHSTTEEEEEETTCCTTHHHHSHHHHHHHHHHHHHTCC
T ss_pred C--CCCEEEEEeCCCCCCCHHHHHHHHHHCCCceEEEeCCCcchHhhhCHHHHHHHHHHHHHhcC
Confidence 8 99999999999999999999999998999999999998 99999999999999999998753
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-31 Score=230.87 Aligned_cols=264 Identities=14% Similarity=0.142 Sum_probs=180.8
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVME 150 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~ 150 (376)
+|.+++|...|+++ +|+|||+||++ ++...|..++..|.+. ||+|+++|+||||.|+.+. ..++.++++
T Consensus 12 ~g~~l~~~~~g~~~---~~~vv~~hG~~--~~~~~~~~~~~~l~~~----G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 82 (286)
T 3qit_A 12 GGNQICLCSWGSPE---HPVVLCIHGIL--EQGLAWQEVALPLAAQ----GYRVVAPDLFGHGRSSHLEMVTSYSSLTFL 82 (286)
T ss_dssp TTEEEEEEEESCTT---SCEEEEECCTT--CCGGGGHHHHHHHHHT----TCEEEEECCTTSTTSCCCSSGGGCSHHHHH
T ss_pred CCceEEEeecCCCC---CCEEEEECCCC--cccchHHHHHHHhhhc----CeEEEEECCCCCCCCCCCCCCCCcCHHHHH
Confidence 48999999999765 78999999999 9999999999999996 8999999999999999665 688999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
+++.+++++++ .++++++|||+||.+++.+|.++|++|+++|+++|........ ...........+.....
T Consensus 83 ~~~~~~~~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 153 (286)
T 3qit_A 83 AQIDRVIQELP------DQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESK---KESAVNQLTTCLDYLSS 153 (286)
T ss_dssp HHHHHHHHHSC------SSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC------CCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcC------CCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCcccc---chhhhHHHHHHHHHHhc
Confidence 99999999997 6889999999999999999999999999999999854221111 01111111111111111
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCC--------chhHHHhhccCCCCCcHHHH
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGAR--------YVPAAFLTGLLDPVNSREEF 302 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 302 (376)
.... ...... ..... ..... .....++....+.......... ..................+.
T Consensus 154 ~~~~-~~~~~~----~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (286)
T 3qit_A 154 TPQH-PIFPDV----ATAAS-RLRQA----IPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQY 223 (286)
T ss_dssp CCCC-CCBSSH----HHHHH-HHHHH----STTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHH
T ss_pred cccc-cccccH----HHHHH-HhhcC----CcccCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHH
Confidence 1100 000000 00000 01101 1133444444443332221100 00001111111111123345
Q ss_pred HHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHH
Q 017180 303 LQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQ 366 (376)
Q Consensus 303 ~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~ 366 (376)
.+.+.++ ++|+++|+|++|.+++.+..+.+.+..+++++++++++|++++|+|+++++.|.+
T Consensus 224 ~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 224 LEMLKSI--QVPTTLVYGDSSKLNRPEDLQQQKMTMTQAKRVFLSGGHNLHIDAAAALASLILT 285 (286)
T ss_dssp HHHHHHC--CSCEEEEEETTCCSSCHHHHHHHHHHSTTSEEEEESSSSCHHHHTHHHHHHHHHC
T ss_pred HHHHhcc--CCCeEEEEeCCCcccCHHHHHHHHHHCCCCeEEEeeCCchHhhhChHHHHHHhhc
Confidence 6677888 9999999999999999999999999999999999998899999999999998864
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-32 Score=233.35 Aligned_cols=244 Identities=10% Similarity=0.043 Sum_probs=157.5
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+++|||+||++ .+...|+.+++.|.+. ||+||++|+||||.|+.+ ...++++++++|+.+++++++ ..
T Consensus 10 g~~vvllHG~~--~~~~~w~~~~~~L~~~----g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~-----~~ 78 (264)
T 2wfl_A 10 QKHFVLVHGGC--LGAWIWYKLKPLLESA----GHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIP-----PD 78 (264)
T ss_dssp CCEEEEECCTT--CCGGGGTTHHHHHHHT----TCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHHSC-----TT
T ss_pred CCeEEEECCCc--cccchHHHHHHHHHhC----CCEEEEeecCCCCCCCCCcccccCHHHHHHHHHHHHHHhC-----CC
Confidence 78999999999 9999999999999764 899999999999999854 346899999999999999995 24
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHH--h-------
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMM--Y------- 239 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------- 239 (376)
++++||||||||.+++.+|.++|++|+++|++++..... .... ..................... +
T Consensus 79 ~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (264)
T 2wfl_A 79 EKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDP-----NHSL-TYPFEKYNEKCPADMMLDSQFSTYGNPENPG 152 (264)
T ss_dssp CCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCT-----TSCT-THHHHHHHHHSCTTTTTTCEEEEESCTTSCE
T ss_pred CCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCC-----Ccch-hhHHHHhhhcCcchhhhhhhhhhccCCCCCc
Confidence 789999999999999999999999999999998742110 0000 000001111000000000000 0
Q ss_pred hhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEE
Q 017180 240 NMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVS 319 (376)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~ 319 (376)
.........+.. ..+. ....+... .......+.... ... +....... ... .. ++|+|+|+
T Consensus 153 ~~~~~~~~~~~~----~~~~---~~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~------~~~--~~--~~P~l~i~ 212 (264)
T 2wfl_A 153 MSMILGPQFMAL----KMFQ---NCSVEDLE-LAKMLTRPGSLF-FQD-LAKAKKFS------TER--YG--SVKRAYIF 212 (264)
T ss_dssp EEEECCHHHHHH----HTST---TSCHHHHH-HHHHHCCCEECC-HHH-HTTSCCCC------TTT--GG--GSCEEEEE
T ss_pred chhhhhHHHHHH----HHhc---CCCHHHHH-HHHhccCCCccc-ccc-cccccccC------hHH--hC--CCCeEEEE
Confidence 000001111111 1111 11111111 111111111100 001 10000000 000 12 67999999
Q ss_pred eCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 320 TEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 320 G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
|++|.+++.+..+.+.+..|++++++++++ |++++|+|+++++.|.+|+.+
T Consensus 213 G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~~ 264 (264)
T 2wfl_A 213 CNEDKSFPVEFQKWFVESVGADKVKEIKEADHMGMLSQPREVCKCLLDISDS 264 (264)
T ss_dssp ETTCSSSCHHHHHHHHHHHCCSEEEEETTCCSCHHHHSHHHHHHHHHHHHC-
T ss_pred eCCcCCCCHHHHHHHHHhCCCceEEEeCCCCCchhhcCHHHHHHHHHHHhhC
Confidence 999999999999999888999999999998 999999999999999999853
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-31 Score=236.75 Aligned_cols=249 Identities=11% Similarity=0.024 Sum_probs=170.2
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC-cCCCCCCCCCCHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-GYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~-G~S~~~~~~~~~~~~~~~ 152 (376)
|.+++|...|+++ +++|||+||++ ++...|..++..|++ ||+|+++|+||| |.|+.+...++.++++++
T Consensus 54 ~~~~~~~~~g~~~---~~~vv~lHG~~--~~~~~~~~~~~~L~~-----g~~vi~~D~~G~gG~s~~~~~~~~~~~~~~~ 123 (306)
T 2r11_A 54 FGQTHVIASGPED---APPLVLLHGAL--FSSTMWYPNIADWSS-----KYRTYAVDIIGDKNKSIPENVSGTRTDYANW 123 (306)
T ss_dssp TEEEEEEEESCTT---SCEEEEECCTT--TCGGGGTTTHHHHHH-----HSEEEEECCTTSSSSCEECSCCCCHHHHHHH
T ss_pred CceEEEEeeCCCC---CCeEEEECCCC--CCHHHHHHHHHHHhc-----CCEEEEecCCCCCCCCCCCCCCCCHHHHHHH
Confidence 6688898888644 78999999999 999999999999998 899999999999 888776678899999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
+.+++++++ .++++|+||||||.+++.+|.++|++|+++|+++|...... ..... .......
T Consensus 124 l~~~l~~l~------~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--------~~~~~---~~~~~~~- 185 (306)
T 2r11_A 124 LLDVFDNLG------IEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLP--------FHHDF---YKYALGL- 185 (306)
T ss_dssp HHHHHHHTT------CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSC--------CCHHH---HHHHHTT-
T ss_pred HHHHHHhcC------CCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCc--------ccHHH---HHHHhHH-
Confidence 999999997 68899999999999999999999999999999998542110 00000 0000000
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhc-cCCCchhHHHhhccCCCCCcHHHHHHHHhcccC
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKR-KGARYVPAAFLTGLLDPVNSREEFLQLFADLEG 311 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 311 (376)
.. ... ...+........ ................ ......+.......... .....+.++
T Consensus 186 -~~----~~~---~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~i-- 245 (306)
T 2r11_A 186 -TA----SNG---VETFLNWMMNDQ-----NVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYV-----FTDEELRSA-- 245 (306)
T ss_dssp -TS----TTH---HHHHHHHHTTTC-----CCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCB-----CCHHHHHTC--
T ss_pred -HH----HHH---HHHHHHHhhCCc-----cccccccccccHHHHHHHHhhhhhhhhccCCCCC-----CCHHHHhcC--
Confidence 00 000 111111111111 1111111110000000 00000000000000000 134567788
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHH-hcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEAL-KGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~-~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
++|+|+|+|++|.+++.+..+.+ .+..+++++++++++ |+++.|+|+++++.|.+||++
T Consensus 246 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 306 (306)
T 2r11_A 246 RVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSMEQPTYVNERVMRFFNA 306 (306)
T ss_dssp CSCEEEEEETTCCSSCHHHHHHHHHHHSTTCEEEEETTCCTTHHHHSHHHHHHHHHHHHC-
T ss_pred CCCEEEEEeCCCcccCHHHHHHHHHHHCCCCEEEEeCCCCCCCcccCHHHHHHHHHHHHhC
Confidence 99999999999999998887744 456889999999998 999999999999999999963
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=237.92 Aligned_cols=253 Identities=10% Similarity=0.062 Sum_probs=171.7
Q ss_pred eEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC----CCCCCCHHHHHH
Q 017180 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR----PKMDYNADVMEK 151 (376)
Q Consensus 76 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~----~~~~~~~~~~~~ 151 (376)
+++|...|++ +|+|||+||++ ++...|..+++.|.+ ||+|+++|+||||.|+. +...++.+++++
T Consensus 10 ~l~~~~~g~~----~p~vv~~HG~~--~~~~~~~~~~~~l~~-----g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 78 (269)
T 4dnp_A 10 ALNVRVVGSG----ERVLVLAHGFG--TDQSAWNRILPFFLR-----DYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVD 78 (269)
T ss_dssp HTTCEEECSC----SSEEEEECCTT--CCGGGGTTTGGGGTT-----TCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHH
T ss_pred HhhhhhcCCC----CCEEEEEeCCC--CcHHHHHHHHHHHhC-----CcEEEEEcCCCCCCCCCCCCCccccCcHHHHHH
Confidence 3567777864 67999999999 999999999999888 89999999999999975 233458999999
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
++.+++++++ .++++|+||||||.+++.+|.++|++|+++|+++|..........................
T Consensus 79 ~~~~~~~~~~------~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 149 (269)
T 4dnp_A 79 DLLHILDALG------IDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAM--- 149 (269)
T ss_dssp HHHHHHHHTT------CCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHH---
T ss_pred HHHHHHHhcC------CCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhc---
Confidence 9999999997 6799999999999999999999999999999999853211110000000000000000000
Q ss_pred CchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccC
Q 017180 232 PGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEG 311 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 311 (376)
.. .....+.. +...... ...++..+.+......... .............. ..+.+.++
T Consensus 150 -------~~---~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~i-- 207 (269)
T 4dnp_A 150 -------EA---NYEAWVNG-FAPLAVG---ADVPAAVREFSRTLFNMRP-DITLFVSRTVFNSD-----MRGVLGLV-- 207 (269)
T ss_dssp -------HH---CHHHHHHH-HHHHHHC---SSCHHHHHHHHHHHHHSCH-HHHHHHHHHHHTCC-----CGGGGGGC--
T ss_pred -------cc---cHHHHHHH-hhhhhcc---CCChhHHHHHHHHHHccCc-chhhhHhhhhcchh-----hHhhhccc--
Confidence 00 00111111 1111111 2223333333333322211 11111111111111 23456778
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcccCC-ceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAKGV-TKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
++|+++|+|++|.+++.+..+.+.+..++ +++++++++ |+++.|+|+++++.|.+||++
T Consensus 208 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 208 KVPCHIFQTARDHSVPASVATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELRRALSH 268 (269)
T ss_dssp CSCEEEEEEESBTTBCHHHHHHHHHHSSSCEEEEEEEEESSCHHHHCHHHHHHHHHHHHC-
T ss_pred cCCEEEEecCCCcccCHHHHHHHHHhCCCCceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence 99999999999999999999999988888 899999988 999999999999999999975
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-31 Score=226.53 Aligned_cols=232 Identities=10% Similarity=0.110 Sum_probs=155.8
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFV 153 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l 153 (376)
|..++|. +. +++|||+||++ ++...|..+++.|.+. ||+|+++|+||||.|+.+...++.+++++|+
T Consensus 7 ~~~~~~~--~~-----~~~vvllHG~~--~~~~~~~~~~~~L~~~----g~~vi~~D~~GhG~s~~~~~~~~~~~~~~d~ 73 (247)
T 1tqh_A 7 PKPFFFE--AG-----ERAVLLLHGFT--GNSADVRMLGRFLESK----GYTCHAPIYKGHGVPPEELVHTGPDDWWQDV 73 (247)
T ss_dssp CCCEEEC--CS-----SCEEEEECCTT--CCTHHHHHHHHHHHHT----TCEEEECCCTTSSSCHHHHTTCCHHHHHHHH
T ss_pred CCCeeeC--CC-----CcEEEEECCCC--CChHHHHHHHHHHHHC----CCEEEecccCCCCCCHHHhcCCCHHHHHHHH
Confidence 4556665 32 57899999999 9999999999999875 8999999999999775433457888887776
Q ss_pred HH---HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 154 VD---LINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 154 ~~---~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
.+ ++++++ .++++|+||||||.+++.+|.++| |+++|++++..... . ........
T Consensus 74 ~~~~~~l~~~~------~~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~--------~-~~~~~~~~----- 131 (247)
T 1tqh_A 74 MNGYEFLKNKG------YEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIK--------S-EETMYEGV----- 131 (247)
T ss_dssp HHHHHHHHHHT------CCCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCC--------C-HHHHHHHH-----
T ss_pred HHHHHHHHHcC------CCeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecC--------c-chhhhHHH-----
Confidence 55 566665 578999999999999999999998 99999876532100 0 00000000
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhccc
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLE 310 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 310 (376)
. ...+...... ..+++............. ......+... ..+..+.++++
T Consensus 132 --------~-------~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~l~~i- 181 (247)
T 1tqh_A 132 --------L-------EYAREYKKRE------GKSEEQIEQEMEKFKQTP-MKTLKALQEL-------IADVRDHLDLI- 181 (247)
T ss_dssp --------H-------HHHHHHHHHH------TCCHHHHHHHHHHHTTSC-CTTHHHHHHH-------HHHHHHTGGGC-
T ss_pred --------H-------HHHHHhhccc------ccchHHHHhhhhcccCCC-HHHHHHHHHH-------HHHHHhhcccC-
Confidence 0 0000000000 011222221111111110 0101111000 01245567888
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHhcccCC--ceEEEeCCC-CCCCCCC-hHHHHHHHHHHHHhh
Q 017180 311 GKLPLLVVSTEGSPRRSKAEMEALKGAKGV--TKFVEVPGA-LLPQEEY-PAMVAQELYQFLQQT 371 (376)
Q Consensus 311 ~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~-H~~~~e~-pe~~~~~i~~fl~~~ 371 (376)
++|+|+|+|++|.++|.+..+.+.+..++ +++++++++ |+++.|+ |+++++.|.+||++.
T Consensus 182 -~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 182 -YAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 245 (247)
T ss_dssp -CSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred -CCCEEEEecCCCCCCCcchHHHHHHhcCCCceEEEEeCCCceeeccCccHHHHHHHHHHHHHhc
Confidence 99999999999999999999999887775 699999999 9998875 799999999999864
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-33 Score=242.54 Aligned_cols=227 Identities=12% Similarity=0.086 Sum_probs=155.1
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
++.|||+||++ ++...|+.+++.|+++ ||+|+++|+||||.|+.....++.+++++|+.++++.+.. ..+
T Consensus 51 ~~~VlllHG~~--~s~~~~~~la~~La~~----Gy~Via~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~~~l~~----~~~ 120 (281)
T 4fbl_A 51 RIGVLVSHGFT--GSPQSMRFLAEGFARA----GYTVATPRLTGHGTTPAEMAASTASDWTADIVAAMRWLEE----RCD 120 (281)
T ss_dssp SEEEEEECCTT--CCGGGGHHHHHHHHHT----TCEEEECCCTTSSSCHHHHHTCCHHHHHHHHHHHHHHHHH----HCS
T ss_pred CceEEEECCCC--CCHHHHHHHHHHHHHC----CCEEEEECCCCCCCCCccccCCCHHHHHHHHHHHHHHHHh----CCC
Confidence 45699999999 9999999999999997 9999999999999997544568899999999999987731 156
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHH
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAI 249 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (376)
+++|+||||||.+++.+|.++|++|+++|+++|......+ . . .........+ ..+.... . .
T Consensus 121 ~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---------~-~-~~~~~~~~~~---~~~~~~~-~---~- 181 (281)
T 4fbl_A 121 VLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESP---------D-L-AALAFNPDAP---AELPGIG-S---D- 181 (281)
T ss_dssp EEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCH---------H-H-HHHHTCTTCC---SEEECCC-C---C-
T ss_pred eEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccch---------h-h-HHHHHhHhhH---Hhhhcch-h---h-
Confidence 8999999999999999999999999999999984311000 0 0 0000000000 0000000 0 0
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHH
Q 017180 250 QSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKA 329 (376)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~ 329 (376)
....... ....... .......+.. ........+++| ++|+|+|+|++|.+++.+
T Consensus 182 ---~~~~~~~-~~~~~~~-------------~~~~~~~~~~-------~~~~~~~~l~~i--~~P~Lii~G~~D~~v~~~ 235 (281)
T 4fbl_A 182 ---IKAEGVK-ELAYPVT-------------PVPAIKHLIT-------IGAVAEMLLPRV--KCPALIIQSREDHVVPPH 235 (281)
T ss_dssp ---CSSTTCC-CCCCSEE-------------EGGGHHHHHH-------HHHHHHHHGGGC--CSCEEEEEESSCSSSCTH
T ss_pred ---hhhHHHH-HhhhccC-------------chHHHHHHHH-------hhhhcccccccc--CCCEEEEEeCCCCCcCHH
Confidence 0000000 0000000 0000000000 011145567888 999999999999999999
Q ss_pred HHHHHhccc--CCceEEEeCCC-CCCCCC-ChHHHHHHHHHHHHhh
Q 017180 330 EMEALKGAK--GVTKFVEVPGA-LLPQEE-YPAMVAQELYQFLQQT 371 (376)
Q Consensus 330 ~~~~~~~~~--~~~~~~~~~~~-H~~~~e-~pe~~~~~i~~fl~~~ 371 (376)
..+.+.+.. +++++++++++ |+++.| +++++.+.|.+||++.
T Consensus 236 ~~~~l~~~l~~~~~~l~~~~~~gH~~~~e~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 236 NGELIYNGIGSTEKELLWLENSYHVATLDNDKELILERSLAFIRKH 281 (281)
T ss_dssp HHHHHHHHCCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 999987765 45689999999 998776 5999999999999873
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.98 E-value=3.4e-31 Score=246.58 Aligned_cols=264 Identities=17% Similarity=0.208 Sum_probs=183.4
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK 151 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 151 (376)
.+|.+++|...|+ +|+|||+||++ ++...|..++..|.+. ||+|+++|+||||.|+.+...++.+++++
T Consensus 11 ~dG~~l~y~~~G~-----gp~VV~lHG~~--~~~~~~~~l~~~La~~----Gy~Vi~~D~rG~G~S~~~~~~~s~~~~a~ 79 (456)
T 3vdx_A 11 STSIDLYYEDHGT-----GVPVVLIHGFP--LSGHSWERQSAALLDA----GYRVITYDRRGFGQSSQPTTGYDYDTFAA 79 (456)
T ss_dssp TEEEEEEEEEESS-----SEEEEEECCTT--CCGGGGTTHHHHHHHH----TEEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred cCCeEEEEEEeCC-----CCEEEEECCCC--CcHHHHHHHHHHHHHC----CcEEEEECCCCCCCCCCCCCCCCHHHHHH
Confidence 3588999999985 78999999999 9999999999999776 99999999999999998778899999999
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhC-CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN-LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~-p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
|+.++++.++ .++++|+||||||.+++.+|.++ |++|+++|+++|................ ..........
T Consensus 80 dl~~~l~~l~------~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 151 (456)
T 3vdx_A 80 DLNTVLETLD------LQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAA--PQEFFDGIVA 151 (456)
T ss_dssp HHHHHHHHHT------CCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSB--CHHHHHHHHH
T ss_pred HHHHHHHHhC------CCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccc--hHHHHHHHHH
Confidence 9999999996 67899999999999999988876 9999999999985321111100000000 0000000000
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcc---cCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHh
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHV---YSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFA 307 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (376)
.........+...+.... ........++.................. ...... ... ..+.+.
T Consensus 152 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~d-----~~~~l~ 215 (456)
T 3vdx_A 152 ---------AVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAA-AAPTTW-YTD-----FRADIP 215 (456)
T ss_dssp ---------HHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHH-HGGGGT-TCC-----CTTTST
T ss_pred ---------hhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhh-hhhhhh-hhh-----HHHHhh
Confidence 000000111111111111 1112244555555554444333322222 111111 111 234567
Q ss_pred cccCCCcEEEEEeCCCCCCCHH-HHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 308 DLEGKLPLLVVSTEGSPRRSKA-EMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 308 ~i~~~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
++ ++|+|+|+|++|.+++.+ ..+.+.+..+++++++++++ |+++.++|+++.+.|.+||++..
T Consensus 216 ~i--~~PvLiI~G~~D~~vp~~~~~~~l~~~~~~~~~~~i~gagH~~~~e~p~~v~~~I~~FL~~~l 280 (456)
T 3vdx_A 216 RI--DVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAKAL 280 (456)
T ss_dssp TC--CSCCEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCSCTTTTTHHHHHHHHHHHHHHHH
T ss_pred hC--CCCEEEEEeCCCCCcCHHHHHHHHHHHCCCceEEEeCCCCCcchhhCHHHHHHHHHHHHHHhh
Confidence 77 999999999999999988 67777888899999999998 99999999999999999998754
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-32 Score=237.32 Aligned_cols=254 Identities=14% Similarity=0.140 Sum_probs=166.0
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchH-hHH-----HHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCC
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEE-WRL-----VAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMD 143 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~-~~~-----~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~ 143 (376)
..+|.+++|...|++++ .+|+|||+||++ ++... |.. +++.|++ +|+|+++|+||||.|+.+ ...
T Consensus 17 ~~~~~~l~y~~~G~~~~-~~p~vvllHG~~--~~~~~~~~~~~~~~~~~~L~~-----~~~vi~~D~~G~G~s~~~~~~~ 88 (286)
T 2qmq_A 17 ETPYGSVTFTVYGTPKP-KRPAIFTYHDVG--LNYKSCFQPLFRFGDMQEIIQ-----NFVRVHVDAPGMEEGAPVFPLG 88 (286)
T ss_dssp EETTEEEEEEEESCCCT-TCCEEEEECCTT--CCHHHHHHHHHTSHHHHHHHT-----TSCEEEEECTTTSTTCCCCCTT
T ss_pred ccCCeEEEEEeccCCCC-CCCeEEEeCCCC--CCchhhhhhhhhhchhHHHhc-----CCCEEEecCCCCCCCCCCCCCC
Confidence 44589999999997521 178999999999 88774 665 7888888 799999999999988632 222
Q ss_pred ---CCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhh
Q 017180 144 ---YNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMET 220 (376)
Q Consensus 144 ---~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~ 220 (376)
++.+++++++.+++++++ .++++|+||||||.+++.+|.++|++|+++|+++|.... ......
T Consensus 89 ~~~~~~~~~~~~l~~~l~~l~------~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~--------~~~~~~ 154 (286)
T 2qmq_A 89 YQYPSLDQLADMIPCILQYLN------FSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNA--------KGWMDW 154 (286)
T ss_dssp CCCCCHHHHHHTHHHHHHHHT------CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCC--------CCHHHH
T ss_pred CCccCHHHHHHHHHHHHHHhC------CCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcc--------cchhhh
Confidence 499999999999999986 678999999999999999999999999999999984211 000010
Q ss_pred hhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCc---hhHHHhhccCCCCC
Q 017180 221 RYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARY---VPAAFLTGLLDPVN 297 (376)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 297 (376)
........ ..... ...+...+..... ...++..+.+........... .+...+........
T Consensus 155 ~~~~~~~~--~~~~~----------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (286)
T 2qmq_A 155 AAHKLTGL--TSSIP----------DMILGHLFSQEEL----SGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNF 218 (286)
T ss_dssp HHHHHHHT--TSCHH----------HHHHHHHSCHHHH----HTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCS
T ss_pred hhhhhccc--cccch----------HHHHHHHhcCCCC----CcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhh
Confidence 00000000 00000 0001000000000 011122222222222111111 11111111111100
Q ss_pred cHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC-CceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 298 SREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG-VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 298 ~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
....+.++ ++|+|+|+|++|.+++ ...+.+.+..+ ++++++++++ |+++.|+|+++++.|.+||+
T Consensus 219 ----~~~~l~~i--~~P~lii~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 219 ----ERGGETTL--KCPVMLVVGDQAPHED-AVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp ----EETTEECC--CSCEEEEEETTSTTHH-HHHHHHHHSCGGGEEEEEETTCTTCHHHHCHHHHHHHHHHHHC
T ss_pred ----hhchhccC--CCCEEEEecCCCcccc-HHHHHHHHhcCCCceEEEeCCCCCcccccChHHHHHHHHHHhc
Confidence 11245677 9999999999999998 45666666666 8999999998 99999999999999999995
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.1e-31 Score=232.90 Aligned_cols=253 Identities=19% Similarity=0.245 Sum_probs=177.8
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHH
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVME 150 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 150 (376)
..+|.+++|...|+ +|+|||+||++ ++...|+.++..|++ +|+|+++|+||||.|+.+...++.++++
T Consensus 54 ~~~~~~~~~~~~g~-----~p~vv~lhG~~--~~~~~~~~~~~~L~~-----~~~v~~~D~~G~G~S~~~~~~~~~~~~~ 121 (314)
T 3kxp_A 54 DIGRITLNVREKGS-----GPLMLFFHGIT--SNSAVFEPLMIRLSD-----RFTTIAVDQRGHGLSDKPETGYEANDYA 121 (314)
T ss_dssp ECSSCEEEEEEECC-----SSEEEEECCTT--CCGGGGHHHHHTTTT-----TSEEEEECCTTSTTSCCCSSCCSHHHHH
T ss_pred EECCEEEEEEecCC-----CCEEEEECCCC--CCHHHHHHHHHHHHc-----CCeEEEEeCCCcCCCCCCCCCCCHHHHH
Confidence 33588999999887 67999999999 999999999999988 8999999999999999777789999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
+++.+++++++ .++++++|||+||.+++.+|.++|++|+++|+++|.... . ............
T Consensus 122 ~dl~~~l~~l~------~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~--~---------~~~~~~~~~~~~ 184 (314)
T 3kxp_A 122 DDIAGLIRTLA------RGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYI--E---------TEALDALEARVN 184 (314)
T ss_dssp HHHHHHHHHHT------SSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTC--C---------HHHHHHHHHHTT
T ss_pred HHHHHHHHHhC------CCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCC--C---------cchhhHHHHHhh
Confidence 99999999997 688999999999999999999999999999999874210 0 000111111111
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhcc-C------CCchhHHHhhccCCCCCcHHHHH
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRK-G------ARYVPAAFLTGLLDPVNSREEFL 303 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~ 303 (376)
.... .+. ........+... . .....+............ . ............... +..
T Consensus 185 ~~~~---~~~----~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 248 (314)
T 3kxp_A 185 AGSQ---LFE----DIKAVEAYLAGR-Y---PNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRS-----DLV 248 (314)
T ss_dssp TTCS---CBS----SHHHHHHHHHHH-S---TTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTS-----CCH
T ss_pred hchh---hhc----CHHHHHHHHHhh-c---ccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCc-----chh
Confidence 0000 000 011111111111 1 122333333332221111 0 000000000000000 134
Q ss_pred HHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 304 QLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 304 ~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+.++++ ++|+|+|+|++|.+++.+..+.+.+..+++++++++++ |+++.|+|+++.+.|.+||++
T Consensus 249 ~~~~~i--~~P~Lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~g~gH~~~~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 249 PAYRDV--TKPVLIVRGESSKLVSAAALAKTSRLRPDLPVVVVPGADHYVNEVSPEITLKAITNFIDA 314 (314)
T ss_dssp HHHHHC--CSCEEEEEETTCSSSCHHHHHHHHHHCTTSCEEEETTCCSCHHHHCHHHHHHHHHHHHHC
T ss_pred hHhhcC--CCCEEEEecCCCccCCHHHHHHHHHhCCCceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 566778 99999999999999999999999988899999999998 999999999999999999974
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-31 Score=236.62 Aligned_cols=255 Identities=12% Similarity=0.063 Sum_probs=169.8
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKF 152 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~ 152 (376)
+.+++|...|++ +|+|||+||++ ++...|..++..| ||+|+++|+||||.|+ .+...++.+++++|
T Consensus 69 ~~~~~~~~~g~~----~~~vv~~hG~~--~~~~~~~~~~~~l-------g~~Vi~~D~~G~G~S~~~~~~~~~~~~~a~d 135 (330)
T 3p2m_A 69 AGAISALRWGGS----APRVIFLHGGG--QNAHTWDTVIVGL-------GEPALAVDLPGHGHSAWREDGNYSPQLNSET 135 (330)
T ss_dssp ETTEEEEEESSS----CCSEEEECCTT--CCGGGGHHHHHHS-------CCCEEEECCTTSTTSCCCSSCBCCHHHHHHH
T ss_pred CceEEEEEeCCC----CCeEEEECCCC--CccchHHHHHHHc-------CCeEEEEcCCCCCCCCCCCCCCCCHHHHHHH
Confidence 557899999865 67899999999 9999998876555 5999999999999999 45568999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc-
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA- 231 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 231 (376)
+.+++++++ .++++|+||||||.+++.+|.++|++|+++|+++|.... ..........
T Consensus 136 l~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~---------------~~~~~~~~~~~ 194 (330)
T 3p2m_A 136 LAPVLRELA------PGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSA---------------LQRHAELTAEQ 194 (330)
T ss_dssp HHHHHHHSS------TTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHH---------------HHHHHHHTCC-
T ss_pred HHHHHHHhC------CCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCcc---------------chhhhhhhhhh
Confidence 999999997 678999999999999999999999999999999973200 0000000000
Q ss_pred CchhhHHh--hhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcc
Q 017180 232 PGVGWMMY--NMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADL 309 (376)
Q Consensus 232 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 309 (376)
........ .........+....... . ....+.................+........ .........+.+.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~i 268 (330)
T 3p2m_A 195 RGTVALMHGEREFPSFQAMLDLTIAAA----P-HRDVKSLRRGVFHNSRRLDNGNWVWRYDAIR-TFGDFAGLWDDVDAL 268 (330)
T ss_dssp ----------CCBSCHHHHHHHHHHHC----T-TSCHHHHHHHHHTTEEECSSSCEEESSCCCS-BCCCHHHHHHHHHHC
T ss_pred hhhhhhhcCCccccCHHHHHHHHHhcC----C-CCCHHHHHHHHHhcccccCCCceEEeechhh-CccccHHHHHHHhhC
Confidence 00000000 00000011111111100 0 1111111111111000000000000000111 111233345677888
Q ss_pred cCCCcEEEEEeCCCCCCCHHHHHHHhcccCCce-EEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 310 EGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTK-FVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 310 ~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
++|+|+|+|++|.+++.+..+.+.+..++++ +++++++ |+++.|+|+++++.|.+||++
T Consensus 269 --~~PvLii~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 269 --SAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQSDQPRALIEIVRGVLDT 329 (330)
T ss_dssp --CSCEEEEEETTCCSSCHHHHHHHHHHCSSEEEEEEETTCCSCHHHHCHHHHHHHHHHHTTC
T ss_pred --CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeeEEEeCCCCCCcchhCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999 9999998 999999999999999999975
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-31 Score=227.02 Aligned_cols=242 Identities=12% Similarity=0.042 Sum_probs=162.9
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+|+|||+||++ ++...|..+++.|.+. ||+|+++|+||||.|+.+. ..++.+++++++.+++++++ ..
T Consensus 4 g~~vv~lHG~~--~~~~~~~~~~~~l~~~----g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~-----~~ 72 (258)
T 3dqz_A 4 KHHFVLVHNAY--HGAWIWYKLKPLLESA----GHRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLKSLP-----EN 72 (258)
T ss_dssp CCEEEEECCTT--CCGGGGTTHHHHHHHT----TCEEEEECCTTSTTCSSCGGGCCSHHHHHHHHHHHHHTSC-----TT
T ss_pred CCcEEEECCCC--CccccHHHHHHHHHhC----CCEEEEecCCCCcCCCCCCCccccHHHhHHHHHHHHHHhc-----cc
Confidence 57999999999 9999999999999986 8999999999999999643 46899999999999999997 23
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHh---------
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMY--------- 239 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 239 (376)
++++|+||||||.+++.+|.++|++|+++|++++........ ........... ...+......
T Consensus 73 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 144 (258)
T 3dqz_A 73 EEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHV-------PSHVLDKYMEM-PGGLGDCEFSSHETRNGTM 144 (258)
T ss_dssp CCEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSC-------TTHHHHHHHTS-TTCCTTCEEEEEEETTEEE
T ss_pred CceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCc-------chHHHHHhccc-chhhhhcccchhhhhccCh
Confidence 899999999999999999999999999999999843211100 00000000000 0000000000
Q ss_pred -hhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEE
Q 017180 240 -NMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVV 318 (376)
Q Consensus 240 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii 318 (376)
... .....+. ...+. ...++......... ..... +...+....... ..... ++|+++|
T Consensus 145 ~~~~-~~~~~~~----~~~~~---~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~--------~~~~~--~~P~l~i 203 (258)
T 3dqz_A 145 SLLK-MGPKFMK----ARLYQ---NCPIEDYELAKMLH-RQGSF--FTEDLSKKEKFS--------EEGYG--SVQRVYV 203 (258)
T ss_dssp EEEE-CCHHHHH----HHTST---TSCHHHHHHHHHHC-CCEEC--CHHHHHTSCCCC--------TTTGG--GSCEEEE
T ss_pred hhhh-hhHHHHH----HHhhc---cCCHHHHHHHHHhc-cCCch--hhhhhhcccccc--------ccccc--cCCEEEE
Confidence 000 0011111 11111 12222222222211 11111 111111100000 01112 6899999
Q ss_pred EeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 319 STEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 319 ~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
+|++|.+++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+|+++.
T Consensus 204 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 257 (258)
T 3dqz_A 204 MSSEDKAIPCDFIRWMIDNFNVSKVYEIDGGDHMVMLSKPQKLFDSLSAIATDY 257 (258)
T ss_dssp EETTCSSSCHHHHHHHHHHSCCSCEEEETTCCSCHHHHSHHHHHHHHHHHHHHT
T ss_pred ECCCCeeeCHHHHHHHHHhCCcccEEEcCCCCCchhhcChHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999988 9999999999999999999874
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=231.13 Aligned_cols=255 Identities=16% Similarity=0.183 Sum_probs=172.9
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC---CCCCHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK---MDYNADVME 150 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~---~~~~~~~~~ 150 (376)
+.+++|...+.. +|+|||+||++ ++...|..++..|.+. ||+|+++|+||||.|+.+. ..++.++++
T Consensus 12 ~~~~~~~~~~~~----~~~vv~lHG~~--~~~~~~~~~~~~l~~~----g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~ 81 (279)
T 4g9e_A 12 HGRIAVRESEGE----GAPLLMIHGNS--SSGAIFAPQLEGEIGK----KWRVIAPDLPGHGKSTDAIDPDRSYSMEGYA 81 (279)
T ss_dssp TEEEEEEECCCC----EEEEEEECCTT--CCGGGGHHHHHSHHHH----HEEEEEECCTTSTTSCCCSCHHHHSSHHHHH
T ss_pred CceEEEEecCCC----CCeEEEECCCC--CchhHHHHHHhHHHhc----CCeEEeecCCCCCCCCCCCCcccCCCHHHHH
Confidence 558899888753 78999999999 9999999999995554 9999999999999999642 468999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
+++.+++++++ .++++++||||||.+++.+|.++|+ +.++|++++........ . .....
T Consensus 82 ~~~~~~~~~~~------~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~-----------~---~~~~~ 140 (279)
T 4g9e_A 82 DAMTEVMQQLG------IADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEV-----------G---QGFKS 140 (279)
T ss_dssp HHHHHHHHHHT------CCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGH-----------H---HHBCC
T ss_pred HHHHHHHHHhC------CCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCcc-----------c---hhhcc
Confidence 99999999986 6789999999999999999999998 88999887642111000 0 00000
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhccc
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLE 310 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 310 (376)
............ ....+..+.. ..+. ....+...+....... .........+....... ....+.++
T Consensus 141 ~~~~~~~~~~~~--~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----~~~~~~~i- 207 (279)
T 4g9e_A 141 GPDMALAGQEIF--SERDVESYAR-STCG--EPFEASLLDIVARTDG--RARRIMFEKFGSGTGGN-----QRDIVAEA- 207 (279)
T ss_dssp STTGGGGGCSCC--CHHHHHHHHH-HHHC--SSCCHHHHHHHHHSCH--HHHHHHHHHHHHTCBCC-----HHHHHHHC-
T ss_pred chhhhhcCcccc--cHHHHHHHHH-hhcc--CcccHHHHHHHHhhhc--cchHHHHHHhhccCCch-----HHHHHHhc-
Confidence 000000000000 1111221111 1111 1122222222111000 00001111111111111 45567788
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHh-cccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 311 GKLPLLVVSTEGSPRRSKAEMEALK-GAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 311 ~~~Pvlii~G~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
++|+|+|+|++|.+++.+..+.+. +..+++++++++++ |+++.|+|+++++.|.+||++...
T Consensus 208 -~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~ 271 (279)
T 4g9e_A 208 -QLPIAVVNGRDEPFVELDFVSKVKFGNLWEGKTHVIDNAGHAPFREAPAEFDAYLARFIRDCTQ 271 (279)
T ss_dssp -CSCEEEEEETTCSSBCHHHHTTCCCSSBGGGSCEEETTCCSCHHHHSHHHHHHHHHHHHHHHHS
T ss_pred -CCCEEEEEcCCCcccchHHHHHHhhccCCCCeEEEECCCCcchHHhCHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999887 77889999999998 999999999999999999998754
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-31 Score=252.24 Aligned_cols=273 Identities=16% Similarity=0.163 Sum_probs=184.3
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVME 150 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~ 150 (376)
+|.+++|...|+ +|+|||+||++ ++...|..++..|.++ ||+|+++|+||||.|+.+. ..++.++++
T Consensus 246 dg~~l~~~~~g~-----~p~vv~~HG~~--~~~~~~~~~~~~l~~~----G~~v~~~D~~G~G~S~~~~~~~~~~~~~~~ 314 (555)
T 3i28_A 246 PRVRLHFVELGS-----GPAVCLCHGFP--ESWYSWRYQIPALAQA----GYRVLAMDMKGYGESSAPPEIEEYCMEVLC 314 (555)
T ss_dssp TTEEEEEEEECS-----SSEEEEECCTT--CCGGGGTTHHHHHHHT----TCEEEEECCTTSTTSCCCSCGGGGSHHHHH
T ss_pred CCcEEEEEEcCC-----CCEEEEEeCCC--CchhHHHHHHHHHHhC----CCEEEEecCCCCCCCCCCCCcccccHHHHH
Confidence 699999999985 78999999999 9999999999999986 8999999999999999654 378899999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhh----HHHH
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRY----GLLR 226 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~----~~~~ 226 (376)
+|+.+++++++ .++++++||||||.+++.+|.++|++|+++|++++......+.... ..... ....
T Consensus 315 ~d~~~~~~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 384 (555)
T 3i28_A 315 KEMVTFLDKLG------LSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSP----LESIKANPVFDYQ 384 (555)
T ss_dssp HHHHHHHHHHT------CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCH----HHHHHTCGGGHHH
T ss_pred HHHHHHHHHcC------CCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccch----HHHHhcCCccchh
Confidence 99999999997 6799999999999999999999999999999998854322211100 00000 0000
Q ss_pred hhhccCchhhHHhhhhhccHHHHHHHHHhcc----------------c------CCCCCCChHHHHHHHHHHhccCCCch
Q 017180 227 GTLRAPGVGWMMYNMLVSNEKAIQSQYKSHV----------------Y------SNPDNVTPGIVESRYALTKRKGARYV 284 (376)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (376)
.....+......... .....+...+.... . ........+....+.......+.. .
T Consensus 385 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 461 (555)
T 3i28_A 385 LYFQEPGVAEAELEQ--NLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFR-G 461 (555)
T ss_dssp HHHHSTTHHHHHHHH--CHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTTH-H
T ss_pred HHhhCCCchHHHHhh--hHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcccch-h
Confidence 000111111000000 00111111111000 0 011123445555554444433221 1
Q ss_pred hHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHH
Q 017180 285 PAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQE 363 (376)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~ 363 (376)
...++...... ........++++ ++|+|+|+|++|.+++.+..+.+.+..+++++++++++ |+++.|+|+++++.
T Consensus 462 ~~~~~~~~~~~--~~~~~~~~~~~i--~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~ 537 (555)
T 3i28_A 462 PLNWYRNMERN--WKWACKSLGRKI--LIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQI 537 (555)
T ss_dssp HHHTTSCHHHH--HHHHHTTTTCCC--CSCEEEEEETTCSSSCGGGGTTGGGTCTTCEEEEETTCCSCHHHHSHHHHHHH
T ss_pred HHHHHHhcccc--chhhcccccccc--ccCEEEEEeCCCCCcCHHHHHHHHhhCCCceEEEeCCCCCCcchhCHHHHHHH
Confidence 11111100000 000122334577 89999999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHhhcC
Q 017180 364 LYQFLQQTFE 373 (376)
Q Consensus 364 i~~fl~~~~~ 373 (376)
|.+||++...
T Consensus 538 i~~fl~~~~~ 547 (555)
T 3i28_A 538 LIKWLDSDAR 547 (555)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHhccC
Confidence 9999998754
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-31 Score=227.24 Aligned_cols=241 Identities=9% Similarity=0.060 Sum_probs=162.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC-CCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM-DYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~-~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+|+|||+||++ ++...|..+++.|.++ ||+|+++|+||||.|+.+.. .++.+++++++.+++++++ ..
T Consensus 12 ~~~vvllHG~~--~~~~~~~~~~~~l~~~----g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~l~~l~-----~~ 80 (267)
T 3sty_A 12 KKHFVLVHAAF--HGAWCWYKIVALMRSS----GHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASLP-----AN 80 (267)
T ss_dssp CCEEEEECCTT--CCGGGGHHHHHHHHHT----TCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHTSC-----TT
T ss_pred CCeEEEECCCC--CCcchHHHHHHHHHhc----CCeEEEeccccCCCCCCcCCccCCHHHHHHHHHHHHHhcC-----CC
Confidence 78999999999 9999999999999986 89999999999999996543 5899999999999999984 37
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh--hccCchhhHHh-------
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT--LRAPGVGWMMY------- 239 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~------- 239 (376)
++++|+||||||.+++.+|.++|++|+++|++++....... . ........ ....+......
T Consensus 81 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (267)
T 3sty_A 81 EKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNI-------D---ATTVCTKAGSAVLGQLDNCVTYENGPTN 150 (267)
T ss_dssp SCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTB-------C---HHHHHHHHHHTTTTCTTCEEECTTCTTS
T ss_pred CCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcc-------h---HHHHHHHhcccchhhhhhhhhhhhhhhc
Confidence 89999999999999999999999999999999985311100 0 00011111 00000000000
Q ss_pred ---hhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEE
Q 017180 240 ---NMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLL 316 (376)
Q Consensus 240 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvl 316 (376)
... .....+.. ..+. ...++....... ............+....... ..... ++|++
T Consensus 151 ~~~~~~-~~~~~~~~----~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~--~~P~l 210 (267)
T 3sty_A 151 PPTTLI-AGPKFLAT----NVYH---LSPIEDLALATA-LVRPLYLYLAEDISKEVVLS---------SKRYG--SVKRV 210 (267)
T ss_dssp CCCEEE-CCHHHHHH----HTST---TSCHHHHHHHHH-HCCCEECCCHHHHHHHCCCC---------TTTGG--GSCEE
T ss_pred ccchhh-hhHHHHHH----hhcc---cCCHHHHHHHHH-hhccchhHHHHHhhcchhcc---------ccccc--CCCEE
Confidence 000 00111111 1111 122222222211 11111111101111000000 00111 58999
Q ss_pred EEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 317 VVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 317 ii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
+|+|++|.+++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+|+++.
T Consensus 211 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 211 FIVATENDALKKEFLKLMIEKNPPDEVKEIEGSDHVTMMSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp EEECCCSCHHHHHHHHHHHHHSCCSEEEECTTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred EEEeCCCCccCHHHHHHHHHhCCCceEEEeCCCCccccccChHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999998 9999999999999999999874
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.5e-32 Score=234.19 Aligned_cols=256 Identities=12% Similarity=0.099 Sum_probs=172.9
Q ss_pred eEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC----CCCCHHHHHH
Q 017180 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK----MDYNADVMEK 151 (376)
Q Consensus 76 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~----~~~~~~~~~~ 151 (376)
+++|...|++ +|+|||+||++ ++...|..+++.|.+ ||+|+++|+||||.|+.+. ...+.+++++
T Consensus 18 ~~~~~~~g~~----~~~vv~lHG~~--~~~~~~~~~~~~l~~-----g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 86 (282)
T 3qvm_A 18 RNNINITGGG----EKTVLLAHGFG--CDQNMWRFMLPELEK-----QFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAK 86 (282)
T ss_dssp HTTCEEEECS----SCEEEEECCTT--CCGGGGTTTHHHHHT-----TSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHH
T ss_pred hcceeecCCC----CCeEEEECCCC--CCcchHHHHHHHHhc-----CceEEEEecCCCCCCCCCCCCccccccHHHHHH
Confidence 3456677763 48999999999 999999999999998 8999999999999998543 2348999999
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCC--cccCCCCchhhhhHHHHhhh
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLP--IVFGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 229 (376)
++.+++++++ .++++|+||||||.+++.+|.++|++|+++|+++|....... ..... ..............
T Consensus 87 ~~~~~~~~~~------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 159 (282)
T 3qvm_A 87 DVEEILVALD------LVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGG-FERDDLEELINLMD 159 (282)
T ss_dssp HHHHHHHHTT------CCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECS-BCHHHHHHHHHHHH
T ss_pred HHHHHHHHcC------CCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhch-hccccHHHHHHHHh
Confidence 9999999997 688999999999999999999999999999999985311100 00000 00000000000000
Q ss_pred ccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcc
Q 017180 230 RAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADL 309 (376)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 309 (376)
. ....... .+...... ....++..+.+......... .....+........ ..+.+.++
T Consensus 160 ----------~---~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~i 217 (282)
T 3qvm_A 160 ----------K---NYIGWAN-YLAPLVMG--ASHSSELIGELSGSFCTTDP-IVAKTFAKATFFSD-----YRSLLEDI 217 (282)
T ss_dssp ----------H---CHHHHHH-HHHHHHHC--TTSCHHHHHHHHHHHHHSCH-HHHHHHHHHHHSCB-----CGGGGGGC
T ss_pred ----------c---chhhHHH-HHHhhccC--CccchhhHHHHHHHHhcCCc-HHHHHHHHHHhccc-----HHHHHhcC
Confidence 0 0001111 11111111 12333333333332222111 11111111111111 23456777
Q ss_pred cCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 310 EGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 310 ~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
++|+++|+|++|.+++.+..+.+.+..+++++++++++ |+++.++|+++++.|.+||++...
T Consensus 218 --~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 280 (282)
T 3qvm_A 218 --STPALIFQSAKDSLASPEVGQYMAENIPNSQLELIQAEGHCLHMTDAGLITPLLIHFIQNNQT 280 (282)
T ss_dssp --CSCEEEEEEEECTTCCHHHHHHHHHHSSSEEEEEEEEESSCHHHHCHHHHHHHHHHHHHHC--
T ss_pred --CCCeEEEEeCCCCcCCHHHHHHHHHhCCCCcEEEecCCCCcccccCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999998 999999999999999999998643
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=243.23 Aligned_cols=282 Identities=11% Similarity=0.080 Sum_probs=170.3
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchH-------------hHHHH---HHHHhhhCCcceEEEEeCCCCCcCC
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEE-------------WRLVA---QDIVQRVGKVNWRATIVDWPGLGYS 137 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~-------------~~~~~---~~L~~~~~~~~~~Vi~~D~~G~G~S 137 (376)
|++|+|...|+.+++.+|+|||+||++ ++... |+.++ ..|... +|+||++|+||||.|
T Consensus 26 ~~~i~y~~~g~~~~~~~p~vll~HG~~--~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~----~~~vi~~D~~G~G~S 99 (377)
T 3i1i_A 26 PVQMGYETYGTLNRERSNVILICHYFS--ATSHAAGKYTAHDEESGWWDGLIGPGKAIDTN----QYFVICTDNLCNVQV 99 (377)
T ss_dssp EEEEEEEEESCCCTTCCCEEEEECCTT--CCSCCSSCSSTTCSSCCTTTTTEETTSSEETT----TCEEEEECCTTCSCT
T ss_pred eeeEEEEeecccCCCCCCEEEEecccc--CcchhccccccccccccchhhhcCCCCccccc----cEEEEEecccccccc
Confidence 568999999976544468999999999 77666 87777 555544 899999999999774
Q ss_pred C-------C-----CC---------CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEE-EEecchHHHHHHHHHHhCCCCcc
Q 017180 138 D-------R-----PK---------MDYNADVMEKFVVDLINAPDSPVSSSESDLV-IFGGGHAATLTVRAAKKNLVKPT 195 (376)
Q Consensus 138 ~-------~-----~~---------~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-lvG~S~Gg~ia~~~a~~~p~~v~ 195 (376)
+ . +. ..++++++++|+.+++++++ .++++ |+||||||.+++.+|.++|++|+
T Consensus 100 ~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~------~~~~~ilvGhS~Gg~ia~~~a~~~p~~v~ 173 (377)
T 3i1i_A 100 KNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMG------IARLHAVMGPSAGGMIAQQWAVHYPHMVE 173 (377)
T ss_dssp TSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTT------CCCBSEEEEETHHHHHHHHHHHHCTTTBS
T ss_pred cCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcC------CCcEeeEEeeCHhHHHHHHHHHHChHHHH
Confidence 3 1 11 15799999999999999997 66775 99999999999999999999999
Q ss_pred eEEE-eccCCCCCCCcccCCCCchhhhhHHHHhhh-------c--cCchhhHH----hhhhhccHHHHHHHHHhcccCCC
Q 017180 196 AIAA-VAPTWAGPLPIVFGRDSSMETRYGLLRGTL-------R--APGVGWMM----YNMLVSNEKAIQSQYKSHVYSNP 261 (376)
Q Consensus 196 ~lvl-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 261 (376)
++|+ +++.... .+..... .......+.... . .+...... ..........+...+........
T Consensus 174 ~lvl~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (377)
T 3i1i_A 174 RMIGVITNPQNP-IITSVNV---AQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVE 249 (377)
T ss_dssp EEEEESCCSBCC-HHHHHHT---THHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCG
T ss_pred HhcccCcCCCcC-CchhhHH---HHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhcccc
Confidence 9999 6653210 0000000 000000000000 0 00000000 00000011111111111000000
Q ss_pred --CCCC-hHHHHHHHHHHhcc-C---CCchhHHHhhcc--CCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHH
Q 017180 262 --DNVT-PGIVESRYALTKRK-G---ARYVPAAFLTGL--LDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEME 332 (376)
Q Consensus 262 --~~~~-~~~~~~~~~~~~~~-~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~ 332 (376)
..+. ++.++.+....... . ....+....... .+.......+.+.+.++ ++|+|+|+|++|.+++.+..+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvlii~G~~D~~~~~~~~~ 327 (377)
T 3i1i_A 250 PYEKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNV--EANVLMIPCKQDLLQPSRYNY 327 (377)
T ss_dssp GGTCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTC--CSEEEEECBTTCSSSCTHHHH
T ss_pred ccccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhC--CCCEEEEecCCccccCHHHHH
Confidence 0000 11122222211111 1 111111111000 00000011246678888 999999999999999999999
Q ss_pred HHhccc----CCceEEEeCC-C-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 333 ALKGAK----GVTKFVEVPG-A-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 333 ~~~~~~----~~~~~~~~~~-~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
.+.+.. ++++++++++ + |++++|+|+++++.|.+||++...
T Consensus 328 ~~~~~~~~~g~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 374 (377)
T 3i1i_A 328 KMVDLLQKQGKYAEVYEIESINGHMAGVFDIHLFEKKVYEFLNRKVS 374 (377)
T ss_dssp HHHHHHHHTTCCEEECCBCCTTGGGHHHHCGGGTHHHHHHHHHSCCS
T ss_pred HHHHHHHhcCCCceEEEcCCCCCCcchhcCHHHHHHHHHHHHHhhhh
Confidence 988877 9999999998 7 999999999999999999998654
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-30 Score=223.90 Aligned_cols=242 Identities=14% Similarity=0.171 Sum_probs=146.1
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+|+|||+||++ ++...|..+++.|++. +|+|+++|+||||.|+.+. .++++++++++.+++++++ .+
T Consensus 16 ~~~vvllHG~~--~~~~~w~~~~~~L~~~----~~~vi~~Dl~GhG~S~~~~-~~~~~~~a~~l~~~l~~l~------~~ 82 (264)
T 1r3d_A 16 TPLVVLVHGLL--GSGADWQPVLSHLART----QCAALTLDLPGHGTNPERH-CDNFAEAVEMIEQTVQAHV------TS 82 (264)
T ss_dssp BCEEEEECCTT--CCGGGGHHHHHHHTTS----SCEEEEECCTTCSSCC--------CHHHHHHHHHHHTTC------CT
T ss_pred CCcEEEEcCCC--CCHHHHHHHHHHhccc----CceEEEecCCCCCCCCCCC-ccCHHHHHHHHHHHHHHhC------cC
Confidence 37899999999 9999999999999833 8999999999999998543 4688999999999999997 44
Q ss_pred c--EEEEecchHHHHHHH---HHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhc
Q 017180 170 D--LVIFGGGHAATLTVR---AAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVS 244 (376)
Q Consensus 170 ~--~~lvG~S~Gg~ia~~---~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (376)
+ ++|+||||||.+++. +|.++|++|+++|++++... .. .......... ....+....... .
T Consensus 83 ~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~--~~------~~~~~~~~~~---~~~~~~~~~~~~---~ 148 (264)
T 1r3d_A 83 EVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFG--LQ------ENEEKAARWQ---HDQQWAQRFSQQ---P 148 (264)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCC--CC------SHHHHHHHHH---HHHHHHHHHHHS---C
T ss_pred CCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCC--CC------Chhhhhhhhc---ccHHHHHHhccc---c
Confidence 4 999999999999999 88899999999999986321 00 0000000000 000000000000 0
Q ss_pred cHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCC
Q 017180 245 NEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSP 324 (376)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~ 324 (376)
....+..+.....+. ..+++..+.+...... .........+...... ......+.++++ ++|+|+|+|++|.
T Consensus 149 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~l~~i--~~P~lii~G~~D~ 220 (264)
T 1r3d_A 149 IEHVLSDWYQQAVFS---SLNHEQRQTLIAQRSA-NLGSSVAHMLLATSLA--KQPYLLPALQAL--KLPIHYVCGEQDS 220 (264)
T ss_dssp HHHHHHHHTTSGGGT---TCCHHHHHHHHHHHTT-SCHHHHHHHHHHTCGG--GCCCCHHHHHTC--SSCEEEEEETTCH
T ss_pred HHHHHHHHhhhhhhh---ccCHHHHHHHHHHHhh-cchHHHHHHHHhhhhc--cCccHHHHHHhc--CCCEEEEEECCCc
Confidence 011111111111111 1223332222221111 1111111111110000 000134567788 9999999999997
Q ss_pred CCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 325 RRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
.++ ...+. .+ .++++++++ |++++|+|+++++.|.+||+++.
T Consensus 221 ~~~-~~~~~----~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 263 (264)
T 1r3d_A 221 KFQ-QLAES----SG-LSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp HHH-HHHHH----HC-SEEEEETTCCSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred hHH-HHHHH----hC-CcEEEcCCCCCchhhcCHHHHHHHHHHHHHHhc
Confidence 542 22222 22 679999998 99999999999999999998764
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=222.66 Aligned_cols=261 Identities=12% Similarity=0.133 Sum_probs=169.3
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHHH
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVM 149 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~ 149 (376)
..+|.+++|...++... ++|+|||+||++ ++...|..++..|.+. ||+|+++|+||||.|+.+. ..++.+++
T Consensus 24 ~~~g~~l~~~~~~~~~~-~~~~vv~~hG~~--~~~~~~~~~~~~l~~~----g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 96 (303)
T 3pe6_A 24 NADGQYLFCRYWAPTGT-PKALIFVSHGAG--EHSGRYEELARMLMGL----DLLVFAHDHVGHGQSEGERMVVSDFHVF 96 (303)
T ss_dssp CTTSCEEEEEEECCSSC-CSEEEEEECCTT--CCGGGGHHHHHHHHHT----TEEEEEECCTTSTTSCSSTTCCSSTHHH
T ss_pred cCCCeEEEEEEeccCCC-CCeEEEEECCCC--chhhHHHHHHHHHHhC----CCcEEEeCCCCCCCCCCCCCCCCCHHHH
Confidence 34588899988875432 257899999999 9999999999999986 8999999999999999543 45788899
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHh--
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRG-- 227 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 227 (376)
++|+.++++.+.... ...+++++|||+||.+++.+|.++|++|+++|+++|....... ...........
T Consensus 97 ~~d~~~~l~~l~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~-------~~~~~~~~~~~~~ 167 (303)
T 3pe6_A 97 VRDVLQHVDSMQKDY--PGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPE-------SATTFKVLAAKVL 167 (303)
T ss_dssp HHHHHHHHHHHHHHS--TTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHH-------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcc--CCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchh-------ccHHHHHHHHHHH
Confidence 999999888764211 2458999999999999999999999999999999984311000 00000000000
Q ss_pred --hhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHH
Q 017180 228 --TLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQL 305 (376)
Q Consensus 228 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (376)
........................ +............... ...... ....+.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------------~~~~~~-------~~~~~~~~ 223 (303)
T 3pe6_A 168 NSVLPNLSSGPIDSSVLSRNKTEVDI-YNSDPLICRAGLKVCF----------------GIQLLN-------AVSRVERA 223 (303)
T ss_dssp HTTCCSCCCCCCCGGGTCSCHHHHHH-HHTCTTSCCSCCCHHH----------------HHHHHH-------HHHHHHHH
T ss_pred HHhcccccCCccchhhhhcchhHHHH-hccCccccccchhhhh----------------HHHHHH-------HHHHHHHH
Confidence 000000000000000000111110 1100000000000000 000000 11224566
Q ss_pred HhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC--CceEEEeCCC-CCCCCCChHHHHH---HHHHHHHhhcC
Q 017180 306 FADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG--VTKFVEVPGA-LLPQEEYPAMVAQ---ELYQFLQQTFE 373 (376)
Q Consensus 306 ~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~-H~~~~e~pe~~~~---~i~~fl~~~~~ 373 (376)
+.++ ++|+++|+|++|.+++.+..+.+.+..+ ++++++++++ |+++.++|+++.+ .+.+||.+...
T Consensus 224 ~~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~ 295 (303)
T 3pe6_A 224 LPKL--TVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTA 295 (303)
T ss_dssp GGGC--CSCEEEEEETTCSSBCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC
T ss_pred hhcC--CCCEEEEeeCCCCCCChHHHHHHHHhcccCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccCC
Confidence 7888 9999999999999999999999987776 7899999998 9999999975544 57778877653
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=236.11 Aligned_cols=276 Identities=13% Similarity=0.068 Sum_probs=174.1
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchH---------hHHHHH---HHHhhhCCcceEEEEeCCCC-CcCCCC
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEE---------WRLVAQ---DIVQRVGKVNWRATIVDWPG-LGYSDR 139 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~---------~~~~~~---~L~~~~~~~~~~Vi~~D~~G-~G~S~~ 139 (376)
+|.+++|...|+.++..+|+|||+||++ ++... |..++. .|.+. ||+|+++|+|| ||.|+.
T Consensus 42 ~g~~l~y~~~g~~~~~~~~~vvllHG~~--~~~~~~~~~~~~~~~~~~~~~~~~L~~~----g~~vi~~D~~G~~g~s~~ 115 (377)
T 2b61_A 42 SYINVAYQTYGTLNDEKNNAVLICHALT--GDAEPYFDDGRDGWWQNFMGAGLALDTD----RYFFISSNVLGGCKGTTG 115 (377)
T ss_dssp CSEEEEEEEESCCCTTCCCEEEEECCTT--CCSCSCCSSSCCCTTGGGEETTSSEETT----TCEEEEECCTTCSSSSSC
T ss_pred cceeEEEEecccccccCCCeEEEeCCCC--CccccccccccchhhhhccCcccccccC----CceEEEecCCCCCCCCCC
Confidence 3889999999975433368999999999 88887 888875 37343 89999999999 798875
Q ss_pred CCC--------------CCCHHHHHHHHHHHHhCCCCCCCCCCCcEE-EEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 140 PKM--------------DYNADVMEKFVVDLINAPDSPVSSSESDLV-IFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 140 ~~~--------------~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
+.. .++.+++++++.+++++++ .++++ |+||||||.+|+.+|.++|++|+++|++++..
T Consensus 116 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 189 (377)
T 2b61_A 116 PSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLG------ISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSI 189 (377)
T ss_dssp TTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTT------CCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCS
T ss_pred CcccCccccccccccCCcccHHHHHHHHHHHHHHcC------CcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCc
Confidence 421 4899999999999999997 67887 99999999999999999999999999999853
Q ss_pred CCCCCcccCCCCchhhhhHHH-HhhhccCchhh-----------H--Hhhhh----hccHHHHHHHHHhcccCCCC-CCC
Q 017180 205 AGPLPIVFGRDSSMETRYGLL-RGTLRAPGVGW-----------M--MYNML----VSNEKAIQSQYKSHVYSNPD-NVT 265 (376)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----------~--~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~ 265 (376)
.... ......... ..+...+.+.. . ..... ......+...+......... ...
T Consensus 190 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (377)
T 2b61_A 190 YFSA--------EAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGD 261 (377)
T ss_dssp SCCH--------HHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSC
T ss_pred cccc--------cchhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccc
Confidence 1100 000000000 00111100000 0 00000 00111121111111110000 000
Q ss_pred hHHHHHHHH----HHhccCCCchhHHHhhcc--CCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCH----HHHHHHh
Q 017180 266 PGIVESRYA----LTKRKGARYVPAAFLTGL--LDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSK----AEMEALK 335 (376)
Q Consensus 266 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~----~~~~~~~ 335 (376)
....+.+.. ..........+....... .+...........+.++ ++|+|+|+|++|.+++. +..+.+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvlii~G~~D~~~~~~~~~~~~~~l~ 339 (377)
T 2b61_A 262 YFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRI--KARYTLVSVTTDQLFKPIDLYKSKQLLE 339 (377)
T ss_dssp CBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTC--CSEEEEEEETTCSSSCHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhhhhhccccChhHHHHHHHHHhccccccccchHHhhhhhc--CCCEEEEecCCcccCCccchHHHHHHHH
Confidence 112222221 111111111111111110 00000011145677888 99999999999999999 8888888
Q ss_pred cccCCceEEEeC-CC-CCCCCCChHHHHHHHHHHHHh
Q 017180 336 GAKGVTKFVEVP-GA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 336 ~~~~~~~~~~~~-~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+..+++++++++ ++ |+++.|+|+++++.|.+||++
T Consensus 340 ~~~~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 340 QSGVDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp HTTCEEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred hcCCCceEEEeCCCCCchhhhcCHHHHHHHHHHHHhc
Confidence 889999999999 88 999999999999999999975
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-33 Score=247.65 Aligned_cols=273 Identities=13% Similarity=0.069 Sum_probs=174.0
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-----CCCCCHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-----KMDYNAD 147 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-----~~~~~~~ 147 (376)
+|.+++|...|+ +|+|||+||++ ++...|..++..|.+ ||+|+++|+||||.|+.+ ...++.+
T Consensus 13 ~g~~~~~~~~g~-----~p~vv~lHG~~--~~~~~~~~~~~~l~~-----g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~ 80 (304)
T 3b12_A 13 GDVTINCVVGGS-----GPALLLLHGFP--QNLHMWARVAPLLAN-----EYTVVCADLRGYGGSSKPVGAPDHANYSFR 80 (304)
Confidence 488999999884 78899999999 999999999999996 999999999999999966 4678999
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHh
Q 017180 148 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRG 227 (376)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (376)
++++|+.+++++++ .++++|+||||||.+++.+|.++|++|+++|+++|............. .....+...
T Consensus 81 ~~~~~l~~~l~~l~------~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~---~~~~~~~~~ 151 (304)
T 3b12_A 81 AMASDQRELMRTLG------FERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRF---VARAYWHWY 151 (304)
Confidence 99999999999986 678999999999999999999999999999999985321100000000 000000000
Q ss_pred hhccCc-hhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHH
Q 017180 228 TLRAPG-VGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLF 306 (376)
Q Consensus 228 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (376)
....+. ....+... .....+...+...........+++..+.+......+.........+....... ........+
T Consensus 152 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 228 (304)
T 3b12_A 152 FLQQPAPYPEKVIGA--DPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTID-FELDHGDLG 228 (304)
Confidence 000000 00000000 00111111011111111222333333333333222221111111111111100 000111226
Q ss_pred hcccCCCcEEEEEeCCCC-CCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 307 ADLEGKLPLLVVSTEGSP-RRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 307 ~~i~~~~Pvlii~G~~D~-~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
.++ ++|+|+|+|++|. +.+....+.+.+..++++++++ ++ |+++.|+|+++++.|.+||++..
T Consensus 229 ~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (304)
T 3b12_A 229 RQV--QCPALVFSGSAGLMHSLFEMQVVWAPRLANMRFASL-PGGHFFVDRFPDDTARILREFLSDAR 293 (304)
Confidence 677 9999999999995 4466677777778888999989 77 99999999999999999998764
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-30 Score=232.97 Aligned_cols=277 Identities=13% Similarity=0.076 Sum_probs=176.8
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC--CCCHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM--DYNADVME 150 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~--~~~~~~~~ 150 (376)
+|.+++|...|+... .+|+|||+||++ ++...|..++..|.+. ||+|+++|+||||.|+.+.. .++.++++
T Consensus 11 ~g~~l~y~~~G~~~~-~~~~vv~~hG~~--~~~~~~~~~~~~l~~~----g~~vi~~d~~g~g~s~~~~~~~~~~~~~~~ 83 (356)
T 2e3j_A 11 RGTRIHAVADSPPDQ-QGPLVVLLHGFP--ESWYSWRHQIPALAGA----GYRVVAIDQRGYGRSSKYRVQKAYRIKELV 83 (356)
T ss_dssp TTEEEEEEEECCTTC-CSCEEEEECCTT--CCGGGGTTTHHHHHHT----TCEEEEECCTTSTTSCCCCSGGGGSHHHHH
T ss_pred CCeEEEEEEecCCCC-CCCEEEEECCCC--CcHHHHHHHHHHHHHc----CCEEEEEcCCCCCCCCCCCcccccCHHHHH
Confidence 488999999996421 178999999999 9999999999999875 89999999999999986543 67999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCC----CCCCcccC-CCCchhhhhHH-
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWA----GPLPIVFG-RDSSMETRYGL- 224 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~----~~~~~~~~-~~~~~~~~~~~- 224 (376)
+++.+++++++ .++++++||||||.+++.+|.++|++|+++|++++... ..++.... ...........
T Consensus 84 ~~~~~~~~~l~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (356)
T 2e3j_A 84 GDVVGVLDSYG------AEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPFAGRGVIGLPGSPFGERRPSDYHLELA 157 (356)
T ss_dssp HHHHHHHHHTT------CSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCGGGSSCCSSCSSCCSCHHHHHHSSS
T ss_pred HHHHHHHHHcC------CCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcccccccccCCCCCcccccchHHHHHhh
Confidence 99999999997 67899999999999999999999999999999987431 00000000 00000000000
Q ss_pred ------HHhhhccCchhhHHhhhhhccHHHHHHHHHhc----------------------------------------c-
Q 017180 225 ------LRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSH----------------------------------------V- 257 (376)
Q Consensus 225 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~- 257 (376)
....+..+......... .....+...+... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (356)
T 2e3j_A 158 GPGRVWYQDYFAVQDGIITEIEE--DLRGWLLGLTYTVSGEGMMAATKAAVDAGVDLESMDPIDVIRAGPLCMAEGARLK 235 (356)
T ss_dssp CSSEEEHHHHHHHCSHHHHHHHT--THHHHHHHHHHHTSHHHHHHHHHCCC-------CCCGGGTSTTSTTEEETTSCGG
T ss_pred cCCcHHHHHHHhcccchHHHHHH--hHHHHHHHHhhccccchhhccchhhcccccccccccccccccccccccccchhhh
Confidence 00000000000000000 0011111111100 0
Q ss_pred ---c---CCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHH--HHhcccCCCcEEEEEeCCCCCCCH-
Q 017180 258 ---Y---SNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQ--LFADLEGKLPLLVVSTEGSPRRSK- 328 (376)
Q Consensus 258 ---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~Pvlii~G~~D~~~~~- 328 (376)
. .......++..+.+.......+... ...++.... ....... .+.++ ++|+|+|+|++|.+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~l~~i--~~PvLii~G~~D~~~p~~ 308 (356)
T 2e3j_A 236 DAFVYPETMPAWFTEADLDFYTGEFERSGFGG-PLSFYHNID----NDWHDLADQQGKPL--TPPALFIGGQYDVGTIWG 308 (356)
T ss_dssp GGCCCCSSCCTTSCHHHHHHHHHHHHHHCSHH-HHHHHHTHH----HHHHHTGGGTTSCC--CSCEEEEEETTCHHHHHT
T ss_pred hcccccccccccCCHHHHHHHHHHhcccCCch-hHHHHHhcc----cChhhhHhhcCCcc--CCCEEEEecCCCcccccc
Confidence 0 0011123344444433333222111 111111000 0000001 13567 99999999999999984
Q ss_pred -HHHHHHhcccCCc-eEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 329 -AEMEALKGAKGVT-KFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 329 -~~~~~~~~~~~~~-~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
+..+.+.+..|++ ++++++++ |++++|+|+++++.|.+||++.
T Consensus 309 ~~~~~~l~~~~p~~~~~~~i~~aGH~~~~e~p~~~~~~i~~fl~~~ 354 (356)
T 2e3j_A 309 AQAIERAHEVMPNYRGTHMIADVGHWIQQEAPEETNRLLLDFLGGL 354 (356)
T ss_dssp HHHHHTHHHHCTTEEEEEEESSCCSCHHHHSHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhCcCcceEEEecCcCcccchhCHHHHHHHHHHHHhhc
Confidence 8888888899998 99999998 9999999999999999999865
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-29 Score=224.37 Aligned_cols=263 Identities=11% Similarity=0.139 Sum_probs=171.2
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHHH
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVM 149 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~ 149 (376)
..+|.+|+|...++... ++|+|||+||++ .+...|..++..|.++ ||+|+++|+||||.|+.+. ..++.+++
T Consensus 42 ~~dg~~l~~~~~~p~~~-~~p~vv~~HG~~--~~~~~~~~~~~~l~~~----g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 114 (342)
T 3hju_A 42 NADGQYLFCRYWKPTGT-PKALIFVSHGAG--EHSGRYEELARMLMGL----DLLVFAHDHVGHGQSEGERMVVSDFHVF 114 (342)
T ss_dssp CTTSCEEEEEEECCSSC-CSEEEEEECCTT--CCGGGGHHHHHHHHTT----TEEEEEECCTTSTTSCSSTTCCSCTHHH
T ss_pred ccCCeEEEEEEeCCCCC-CCcEEEEECCCC--cccchHHHHHHHHHhC----CCeEEEEcCCCCcCCCCcCCCcCcHHHH
Confidence 44688999988865432 257899999999 9999999999999987 8999999999999999543 56788899
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhh-hHHHHhh
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETR-YGLLRGT 228 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~ 228 (376)
++|+.++++.+.... ...+++|+|||+||.+++.+|.++|++|+++|+++|........ ....... .......
T Consensus 115 ~~d~~~~l~~l~~~~--~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~----~~~~~~~~~~~~~~~ 188 (342)
T 3hju_A 115 VRDVLQHVDSMQKDY--PGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPES----ATTFKVLAAKVLNLV 188 (342)
T ss_dssp HHHHHHHHHHHHHHS--TTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTT----TSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC--CCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhh----hhHHHHHHHHHHHHh
Confidence 999998888865221 24589999999999999999999999999999999854211100 0000000 0000000
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
....................+.. +................ ..... ....+.+.+.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----------------~~~~~-------~~~~~~~~~~~ 244 (342)
T 3hju_A 189 LPNLSLGPIDSSVLSRNKTEVDI-YNSDPLICRAGLKVCFG----------------IQLLN-------AVSRVERALPK 244 (342)
T ss_dssp CTTCBCCCCCGGGSCSCHHHHHH-HHTCTTCCCSCCBHHHH----------------HHHHH-------HHHHHHHHGGG
T ss_pred ccccccCcccccccccchHHHHH-HhcCcccccccccHHHH----------------HHHHH-------HHHHHHHHHHh
Confidence 00000000000000001111111 11111100000000000 00000 11224567788
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhcccC--CceEEEeCCC-CCCCCCChHHHHH---HHHHHHHhhc
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKGAKG--VTKFVEVPGA-LLPQEEYPAMVAQ---ELYQFLQQTF 372 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~-H~~~~e~pe~~~~---~i~~fl~~~~ 372 (376)
+ ++|+|+|+|++|.+++.+..+.+.+..+ ++++++++++ |+++.++|+++.+ .+.+||.+..
T Consensus 245 i--~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (342)
T 3hju_A 245 L--TVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 312 (342)
T ss_dssp C--CSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred C--CcCEEEEEeCCCcccChHHHHHHHHHcCCCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhccc
Confidence 8 9999999999999999999999987776 7899999998 9999999975554 4777887654
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-29 Score=220.52 Aligned_cols=229 Identities=10% Similarity=0.087 Sum_probs=145.8
Q ss_pred CceeEEEEecccCCC--CCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC-cCCCCCCCCCCHHHH
Q 017180 73 NSINIYYEKHERESP--DPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-GYSDRPKMDYNADVM 149 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~--~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~-G~S~~~~~~~~~~~~ 149 (376)
+|.+++|...++... +.+|+|||+||++ .+...|..+++.|++. ||+|+++|+||| |.|+.+...++.+++
T Consensus 16 dG~~l~~~~~~p~~~~~~~~~~VvllHG~g--~~~~~~~~~~~~L~~~----G~~Vi~~D~rGh~G~S~~~~~~~~~~~~ 89 (305)
T 1tht_A 16 NGQELHVWETPPKENVPFKNNTILIASGFA--RRMDHFAGLAEYLSTN----GFHVFRYDSLHHVGLSSGSIDEFTMTTG 89 (305)
T ss_dssp TTEEEEEEEECCCTTSCCCSCEEEEECTTC--GGGGGGHHHHHHHHTT----TCCEEEECCCBCC--------CCCHHHH
T ss_pred CCCEEEEEEecCcccCCCCCCEEEEecCCc--cCchHHHHHHHHHHHC----CCEEEEeeCCCCCCCCCCcccceehHHH
Confidence 588899888775321 1268999999999 9999999999999876 899999999999 999866667899999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhh
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (376)
++|+.++++.+.. ....+++|+||||||.+|+.+|.+ | +|+++|++++... .. .......
T Consensus 90 ~~D~~~~~~~l~~---~~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~------------~~---~~~~~~~ 149 (305)
T 1tht_A 90 KNSLCTVYHWLQT---KGTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVN------------LR---DTLEKAL 149 (305)
T ss_dssp HHHHHHHHHHHHH---TTCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSC------------HH---HHHHHHH
T ss_pred HHHHHHHHHHHHh---CCCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchh------------HH---HHHHHHh
Confidence 9998888775410 016789999999999999999998 7 8999999876310 00 0000000
Q ss_pred ccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcc
Q 017180 230 RAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADL 309 (376)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 309 (376)
........ .... ............. ..+... ...... .......+.++++
T Consensus 150 ~~~~~~~~-~~~~-----------~~~~~~~~~~~~~---~~~~~~------------~~~~~~---~~~~~~~~~l~~i 199 (305)
T 1tht_A 150 GFDYLSLP-IDEL-----------PNDLDFEGHKLGS---EVFVRD------------CFEHHW---DTLDSTLDKVANT 199 (305)
T ss_dssp SSCGGGSC-GGGC-----------CSEEEETTEEEEH---HHHHHH------------HHHTTC---SSHHHHHHHHTTC
T ss_pred hhhhhhcc-hhhC-----------cccccccccccCH---HHHHHH------------HHhccc---cchhhHHHHHhhc
Confidence 00000000 0000 0000000000000 000000 000000 0112244567888
Q ss_pred cCCCcEEEEEeCCCCCCCHHHHHHHhccc--CCceEEEeCCC-CCCCCCChHHH
Q 017180 310 EGKLPLLVVSTEGSPRRSKAEMEALKGAK--GVTKFVEVPGA-LLPQEEYPAMV 360 (376)
Q Consensus 310 ~~~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~-H~~~~e~pe~~ 360 (376)
++|+|+|+|++|.++|.+..+.+.+.. +++++++++++ |.++ |+|+.+
T Consensus 200 --~~PvLii~G~~D~~vp~~~~~~l~~~i~~~~~~l~~i~~agH~~~-e~p~~~ 250 (305)
T 1tht_A 200 --SVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVL 250 (305)
T ss_dssp --CSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHHH
T ss_pred --CCCEEEEEeCCCCccCHHHHHHHHHhcCCCCcEEEEeCCCCCchh-hCchHH
Confidence 999999999999999999999998765 57899999999 9986 888743
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-31 Score=226.00 Aligned_cols=236 Identities=9% Similarity=0.077 Sum_probs=161.5
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFV 153 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l 153 (376)
|.+++|...|++++ +|+|||+||++ ++...|. ++..|.+ ||+|+++|+||||.|+ +...++.+++++++
T Consensus 2 g~~l~y~~~g~~~~--~~~vv~~hG~~--~~~~~~~-~~~~l~~-----g~~v~~~d~~g~g~s~-~~~~~~~~~~~~~~ 70 (245)
T 3e0x_A 2 NAMLHYVHVGNKKS--PNTLLFVHGSG--CNLKIFG-ELEKYLE-----DYNCILLDLKGHGESK-GQCPSTVYGYIDNV 70 (245)
T ss_dssp CCCCCEEEEECTTC--SCEEEEECCTT--CCGGGGT-TGGGGCT-----TSEEEEECCTTSTTCC-SCCCSSHHHHHHHH
T ss_pred CceeEEEecCCCCC--CCEEEEEeCCc--ccHHHHH-HHHHHHh-----CCEEEEecCCCCCCCC-CCCCcCHHHHHHHH
Confidence 56788999887643 78999999999 9999998 7888875 9999999999999998 44678999999999
Q ss_pred HHHH------hCCCCCCCCCCCcEEEEecchHHHHHHHHHHh-CCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHH
Q 017180 154 VDLI------NAPDSPVSSSESDLVIFGGGHAATLTVRAAKK-NLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLR 226 (376)
Q Consensus 154 ~~~l------~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~-~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 226 (376)
.+++ +++ . +++++|||+||.+++.+|.+ +|+ |+++|+++|..... .........+.
T Consensus 71 ~~~~~~~~~~~~~-------~-~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~--------~~~~~~~~~~~ 133 (245)
T 3e0x_A 71 ANFITNSEVTKHQ-------K-NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFD--------KLDKDFMEKIY 133 (245)
T ss_dssp HHHHHHCTTTTTC-------S-CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCT--------TSCHHHHHHHH
T ss_pred HHHHHhhhhHhhc-------C-ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccc--------cccHHHHHHHH
Confidence 9999 665 3 89999999999999999999 999 99999999853110 00000000000
Q ss_pred hhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHH
Q 017180 227 GTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLF 306 (376)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (376)
................ ....... ...... . .+........... ... ..+.+
T Consensus 134 ~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~----~-~~~~~~~~~~~~~----------------~~~-----~~~~~ 184 (245)
T 3e0x_A 134 HNQLDNNYLLECIGGI--DNPLSEK-YFETLE----K-DPDIMINDLIACK----------------LID-----LVDNL 184 (245)
T ss_dssp TTCCCHHHHHHHHTCS--CSHHHHH-HHTTSC----S-SHHHHHHHHHHHH----------------HCB-----CGGGG
T ss_pred HHHHHhhcCccccccc--chHHHHH-HHHHHh----c-CcHHHHHHHHHhc----------------ccc-----HHHHH
Confidence 0000000000000000 0011110 000000 0 1111111100000 000 23346
Q ss_pred hcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHH
Q 017180 307 ADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFL 368 (376)
Q Consensus 307 ~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl 368 (376)
.++ ++|+++|+|++|.+++.+..+.+.+..+++++++++++ |+++.++|+++.+.|.+||
T Consensus 185 ~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 185 KNI--DIPVKAIVAKDELLTLVEYSEIIKKEVENSELKIFETGKHFLLVVNAKGVAEEIKNFI 245 (245)
T ss_dssp GGC--CSCEEEEEETTCSSSCHHHHHHHHHHSSSEEEEEESSCGGGHHHHTHHHHHHHHHTTC
T ss_pred HhC--CCCEEEEEeCCCCCCCHHHHHHHHHHcCCceEEEeCCCCcceEEecHHHHHHHHHhhC
Confidence 677 99999999999999999999999988999999999998 9999999999999999885
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-30 Score=228.37 Aligned_cols=270 Identities=13% Similarity=0.076 Sum_probs=156.7
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVME 150 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~ 150 (376)
+|.+++|...|+++ +++|||+||+++......|.. .+... +|+||++|+||||.|+.+. ..++.++++
T Consensus 23 ~g~~l~~~~~g~~~---g~~vvllHG~~~~~~~~~~~~---~~~~~----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 92 (317)
T 1wm1_A 23 DGHRIYWELSGNPN---GKPAVFIHGGPGGGISPHHRQ---LFDPE----RYKVLLFDQRGCGRSRPHASLDNNTTWHLV 92 (317)
T ss_dssp SSCEEEEEEEECTT---SEEEEEECCTTTCCCCGGGGG---GSCTT----TEEEEEECCTTSTTCBSTTCCTTCSHHHHH
T ss_pred CCcEEEEEEcCCCC---CCcEEEECCCCCcccchhhhh---hcccc----CCeEEEECCCCCCCCCCCcccccccHHHHH
Confidence 58899999998654 678999999872222222322 23222 8999999999999998543 368899999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcc-cCCCCchhhhhHHHHhhh
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIV-FGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 229 (376)
+|+.+++++++ .++++|+||||||.+|+.+|.++|++|+++|++++......... ..................
T Consensus 93 ~dl~~l~~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (317)
T 1wm1_A 93 ADIERLREMAG------VEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVL 166 (317)
T ss_dssp HHHHHHHHHTT------CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHH
T ss_pred HHHHHHHHHcC------CCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhhccchhhcHHHHHHHH
Confidence 99999999997 77899999999999999999999999999999986321000000 000000000000000000
Q ss_pred cc-Cc--h---hhHHhhhhhccHHHHHH----HH---HhcccCCCCCCChHHHH----HHHHHHhccCCCchhHHH-h-h
Q 017180 230 RA-PG--V---GWMMYNMLVSNEKAIQS----QY---KSHVYSNPDNVTPGIVE----SRYALTKRKGARYVPAAF-L-T 290 (376)
Q Consensus 230 ~~-~~--~---~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~-~ 290 (376)
.. +. . ...+...+......... .+ ...... ....+...+ .+..... .....+ . .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 239 (317)
T 1wm1_A 167 SILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVT--LLPSRESASFGEDDFALAFA-----RIENHYFTHL 239 (317)
T ss_dssp TTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSS--SSCCGGGGGGGCHHHHHHHH-----HHHHHHHHTG
T ss_pred hhccchhhcchHHHHHhhhcCCCccccccccccccccccchhh--ccCCcccccccccchhhhHH-----Hhhhhhhhcc
Confidence 00 00 0 00000000000000000 00 000000 000000000 0000000 000000 0 0
Q ss_pred ccCCCCCcHHHHHHHHhcccCC-CcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCC-ChHHHHHHHHHH
Q 017180 291 GLLDPVNSREEFLQLFADLEGK-LPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEE-YPAMVAQELYQF 367 (376)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~i~~~-~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e-~pe~~~~~i~~f 367 (376)
..... .....+.+.++ + +|+|+|+|++|.+++.+..+.+.+.+|++++++++++ |+++.+ .++++.+.|.+|
T Consensus 240 ~~~~~---~~~~~~~~~~i--~~~P~lii~G~~D~~~~~~~~~~l~~~~p~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f 314 (317)
T 1wm1_A 240 GFLES---DDQLLRNVPLI--RHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGAGHSYDEPGILHQLMIATDRF 314 (317)
T ss_dssp GGCSS---TTHHHHTGGGG--TTSCEEEEEETTCSSSCHHHHHHHHHHCTTSEEEEETTCCSSTTSHHHHHHHHHHHHHH
T ss_pred ccccc---chhhHhhcccc--cCCCEEEEEecCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcchHHHHHHHHHHH
Confidence 01110 01134456667 6 9999999999999999999999999999999999998 998765 688999999999
Q ss_pred HHh
Q 017180 368 LQQ 370 (376)
Q Consensus 368 l~~ 370 (376)
+.+
T Consensus 315 ~~~ 317 (317)
T 1wm1_A 315 AGK 317 (317)
T ss_dssp TC-
T ss_pred hcC
Confidence 864
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-29 Score=227.82 Aligned_cols=275 Identities=15% Similarity=0.052 Sum_probs=169.7
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccch-------------HhHHHHH---HHHhhhCCcceEEEEeCCCC--Cc
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVE-------------EWRLVAQ---DIVQRVGKVNWRATIVDWPG--LG 135 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~-------------~~~~~~~---~L~~~~~~~~~~Vi~~D~~G--~G 135 (376)
|.+++|...|++++..+|+|||+||++ ++.. .|..++. .|.+. ||+|+++|+|| ||
T Consensus 30 g~~l~y~~~g~~~~~~~~~vvllHG~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----g~~vi~~D~~G~~~G 103 (366)
T 2pl5_A 30 PVVIAYETYGTLSSSKNNAILICHALS--GDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTN----QYFIICSNVIGGCKG 103 (366)
T ss_dssp SEEEEEEEEECCCTTSCCEEEEECCSS--CCSCCSSBSSTTCSSCCTTTTTEETTSSEETT----TCEEEEECCTTCSSS
T ss_pred CceeeEEeccCcCCCCCceEEEecccC--CcccccccccccccccchHHhhcCCccccccc----ccEEEEecCCCcccC
Confidence 889999999975432368999999999 7776 7888774 34333 89999999999 89
Q ss_pred CCCCCC---C----------CCCHHHHHHHHHHHHhCCCCCCCCCCCcE-EEEecchHHHHHHHHHHhCCCCcceEEEec
Q 017180 136 YSDRPK---M----------DYNADVMEKFVVDLINAPDSPVSSSESDL-VIFGGGHAATLTVRAAKKNLVKPTAIAAVA 201 (376)
Q Consensus 136 ~S~~~~---~----------~~~~~~~~~~l~~~l~~l~~~~~~~~~~~-~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~ 201 (376)
.|+... . .++.+++++|+.+++++++ .+++ +|+||||||.+++.+|.++|++|+++|+++
T Consensus 104 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 177 (366)
T 2pl5_A 104 SSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLG------IEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMA 177 (366)
T ss_dssp SSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTT------CSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEES
T ss_pred CCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHcC------CceEEEEEEeCccHHHHHHHHHhCcHhhhheeEec
Confidence 887421 1 4799999999999999997 6788 899999999999999999999999999999
Q ss_pred cCCCCCCCcccCCCCchhhhhHHHHh-hhccCc------------hhhHHhhh----hhccHHHHHHHHHhcccCCCCCC
Q 017180 202 PTWAGPLPIVFGRDSSMETRYGLLRG-TLRAPG------------VGWMMYNM----LVSNEKAIQSQYKSHVYSNPDNV 264 (376)
Q Consensus 202 p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
|..... ............ +...+. ....+... .......+...+...........
T Consensus 178 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (366)
T 2pl5_A 178 STAEHS--------AMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILS 249 (366)
T ss_dssp CCSBCC--------HHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTT
T ss_pred cCccCC--------CccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccc
Confidence 853110 000000000000 000000 00000000 00011122222221111100000
Q ss_pred ChHHHHHHHHHHhcc----CCCchhHHHhhcc--CCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc
Q 017180 265 TPGIVESRYALTKRK----GARYVPAAFLTGL--LDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK 338 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~ 338 (376)
..+..+.+....... .....+....... .+.. ...+..+.+.++ ++|+|+|+|++|.+++.+..+.+.+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~ 326 (366)
T 2pl5_A 250 TDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLG-KGKELTAALSNA--TCRFLVVSYSSDWLYPPAQSREIVKSL 326 (366)
T ss_dssp TTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCC-SHHHHHHHHTTC--CSEEEEEEETTCCSSCHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHhhhcccChhHHHHHHhhhhhhccc-cccchhhhhccC--CCCEEEEecCCCcccCHHHHHHHHHHh
Confidence 000000000000000 0000000000000 0000 111245577888 999999999999999999999998887
Q ss_pred C----CceEEEe-CCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 339 G----VTKFVEV-PGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 339 ~----~~~~~~~-~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
+ +++++++ +++ |+++.|+|+++++.|.+||++.
T Consensus 327 ~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 327 EAADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLENP 365 (366)
T ss_dssp HHTTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHCC
T ss_pred hhcccCeEEEEeCCCCCcchhhcChhHHHHHHHHHHccC
Confidence 7 8999999 898 9999999999999999999863
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=232.42 Aligned_cols=286 Identities=12% Similarity=0.110 Sum_probs=182.1
Q ss_pred cCCceeEEEEecccCC------CCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcce---EEEEeCCCCCcCCCCC-
Q 017180 71 KENSINIYYEKHERES------PDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNW---RATIVDWPGLGYSDRP- 140 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~------~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~---~Vi~~D~~G~G~S~~~- 140 (376)
..+|.+|+|...|+.+ ..++|+|||+||++ ++...|..++..|.+...+.|| +|+++|+||||.|+.+
T Consensus 27 ~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~--~~~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~~~~ 104 (398)
T 2y6u_A 27 ATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSG--MSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRN 104 (398)
T ss_dssp TTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTT--CCGGGGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHHHHT
T ss_pred CCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCC--CcHHHHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCCCCC
Confidence 4458899999988653 11237899999999 9999999999988831001278 9999999999999843
Q ss_pred ----CCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCC------Cc
Q 017180 141 ----KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPL------PI 210 (376)
Q Consensus 141 ----~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~------~~ 210 (376)
...++.+++++|+.++++.+.........+++|+||||||.+++.+|.++|++|+++|+++|...... +.
T Consensus 105 ~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 184 (398)
T 2y6u_A 105 RGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGRPG 184 (398)
T ss_dssp TTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCCSCCCTT
T ss_pred ccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccccccccccccccc
Confidence 24689999999999999874310000123499999999999999999999999999999998643211 00
Q ss_pred ccCCCC-chhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhcc-------CCC
Q 017180 211 VFGRDS-SMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRK-------GAR 282 (376)
Q Consensus 211 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 282 (376)
...... ........+...... .. .....+...+....+. ...+++..+.+....... ...
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (398)
T 2y6u_A 185 LPPDSPQIPENLYNSLRLKTCD---------HF-ANESEYVKYMRNGSFF--TNAHSQILQNIIDFERTKASGDDEDGGP 252 (398)
T ss_dssp CCTTCCCCCHHHHHHHHHTCCC---------EE-SSHHHHHHHHHHTSTT--TTSCHHHHHHHHHHHEEC--------CC
T ss_pred ccccccccchhhHHHhhhhccc---------cC-CCHHHHHHHhhcCccc--ccCCHHHHHHHHHhcCccccccccCCCc
Confidence 000000 000000000000000 00 0011111122222211 123445544444321111 000
Q ss_pred ----chhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCCh
Q 017180 283 ----YVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYP 357 (376)
Q Consensus 283 ----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~p 357 (376)
......+..+.............+.++ ++|+|+|+|++|.+++.+..+.+.+..+++++++++++ |+++.|+|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~PvLii~G~~D~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~e~p 330 (398)
T 2y6u_A 253 VRTKMEQAQNLLCYMNMQTFAPFLISNVKFV--RKRTIHIVGARSNWCPPQNQLFLQKTLQNYHLDVIPGGSHLVNVEAP 330 (398)
T ss_dssp EEESSCHHHHHHTTSCGGGTHHHHHHHGGGC--CSEEEEEEETTCCSSCHHHHHHHHHHCSSEEEEEETTCCTTHHHHSH
T ss_pred eEecCCchhhhhhhcccccchHHHHHhcccc--CCCEEEEEcCCCCCCCHHHHHHHHHhCCCceEEEeCCCCccchhcCH
Confidence 000001111111111223355678888 99999999999999999999999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHhhc
Q 017180 358 AMVAQELYQFLQQTF 372 (376)
Q Consensus 358 e~~~~~i~~fl~~~~ 372 (376)
+++++.|.+||.+..
T Consensus 331 ~~~~~~i~~fl~~~~ 345 (398)
T 2y6u_A 331 DLVIERINHHIHEFV 345 (398)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998754
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=219.04 Aligned_cols=238 Identities=13% Similarity=0.103 Sum_probs=169.2
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCcc--chHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHH
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVST--VEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADV 148 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~--~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~ 148 (376)
..+|.+++|...++..+ ++|+|||+||++ ++ ...|..++..|.+. ||+|+++|+||||.|+.+...++.++
T Consensus 28 ~~~g~~l~~~~~~p~~~-~~p~vv~~HG~~--~~~~~~~~~~~~~~l~~~----G~~v~~~d~~G~G~s~~~~~~~~~~~ 100 (270)
T 3pfb_A 28 ERDGLQLVGTREEPFGE-IYDMAIIFHGFT--ANRNTSLLREIANSLRDE----NIASVRFDFNGHGDSDGKFENMTVLN 100 (270)
T ss_dssp EETTEEEEEEEEECSSS-SEEEEEEECCTT--CCTTCHHHHHHHHHHHHT----TCEEEEECCTTSTTSSSCGGGCCHHH
T ss_pred ccCCEEEEEEEEcCCCC-CCCEEEEEcCCC--CCccccHHHHHHHHHHhC----CcEEEEEccccccCCCCCCCccCHHH
Confidence 34589999998886432 267899999999 66 67799999999986 89999999999999997767789999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
+++|+.++++.+.... ..++++|+|||+||.+++.+|.++|++|+++|+++|.... ........
T Consensus 101 ~~~d~~~~i~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~--------------~~~~~~~~ 164 (270)
T 3pfb_A 101 EIEDANAILNYVKTDP--HVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATL--------------KGDALEGN 164 (270)
T ss_dssp HHHHHHHHHHHHHTCT--TEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHH--------------HHHHHHTE
T ss_pred HHHhHHHHHHHHHhCc--CCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEecccccc--------------chhhhhhh
Confidence 9999998888873211 2568999999999999999999999999999999984200 00000000
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
. . .....+....... ..........+....... ...+.+.+
T Consensus 165 ~------------------------~-~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 205 (270)
T 3pfb_A 165 T------------------------Q-GVTYNPDHIPDRL---------PFKDLTLGGFYLRIAQQL-----PIYEVSAQ 205 (270)
T ss_dssp E------------------------T-TEECCTTSCCSEE---------EETTEEEEHHHHHHHHHC-----CHHHHHTT
T ss_pred h------------------------h-ccccCcccccccc---------cccccccchhHhhccccc-----CHHHHHhh
Confidence 0 0 0000000000000 000000000000000000 14556778
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
+ ++|+++++|++|.+++.+..+.+.+..+++++++++++ |+++.++|+++.+.|.+||++..
T Consensus 206 ~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 268 (270)
T 3pfb_A 206 F--TKPVCLIHGTDDTVVSPNASKKYDQIYQNSTLHLIEGADHCFSDSYQKNAVNLTTDFLQNNN 268 (270)
T ss_dssp C--CSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEETTCCTTCCTHHHHHHHHHHHHHHC---
T ss_pred C--CccEEEEEcCCCCCCCHHHHHHHHHhCCCCeEEEcCCCCcccCccchHHHHHHHHHHHhhcC
Confidence 8 99999999999999999999999888999999999998 99999999999999999998753
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.9e-30 Score=237.27 Aligned_cols=278 Identities=11% Similarity=0.076 Sum_probs=171.4
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchH---hHHHHH---HHHhhhCCcceEEEEeCCCC--CcCCCC----C
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEE---WRLVAQ---DIVQRVGKVNWRATIVDWPG--LGYSDR----P 140 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~---~~~~~~---~L~~~~~~~~~~Vi~~D~~G--~G~S~~----~ 140 (376)
+|++++|...|+.++..+++|||+||++ ++... |..++. .|... +|+|+++|+|| ||.|+. +
T Consensus 92 ~g~~l~y~~~G~~~~~~~p~vvllHG~~--~~~~~~~~w~~~~~~~~~L~~~----~~~Vi~~D~~G~~~G~S~~~~~~~ 165 (444)
T 2vat_A 92 RDVPVAYKSWGRMNVSRDNCVIVCHTLT--SSAHVTSWWPTLFGQGRAFDTS----RYFIICLNYLGSPFGSAGPCSPDP 165 (444)
T ss_dssp EEEEEEEEEESCCCTTSCCEEEEECCTT--CCSCGGGTCGGGBSTTSSBCTT----TCEEEEECCTTCSSSSSSTTSBCT
T ss_pred cceeEEEEEecCCCCCCCCeEEEECCCC--cccchhhHHHHhcCccchhhcc----CCEEEEecCCCCCCCCCCCCCCCc
Confidence 3889999999975433368999999999 88877 888775 46333 89999999999 798863 1
Q ss_pred C--C---------CCCHHHHHHHHHHHHhCCCCCCCCCCCc-EEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCC
Q 017180 141 K--M---------DYNADVMEKFVVDLINAPDSPVSSSESD-LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPL 208 (376)
Q Consensus 141 ~--~---------~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~ 208 (376)
. . .++.+++++|+.+++++++ .++ ++|+||||||.+++.+|.++|++|+++|++++.....
T Consensus 166 ~~~~~~~~~~~f~~~t~~~~a~dl~~ll~~l~------~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~- 238 (444)
T 2vat_A 166 DAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLG------VRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQS- 238 (444)
T ss_dssp TTC--CBCGGGCCCCCHHHHHHHHHHHHHHHT------CCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCC-
T ss_pred ccccccccccccccccHHHHHHHHHHHHHhcC------CccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCC-
Confidence 1 1 3799999999999999997 667 9999999999999999999999999999999853110
Q ss_pred CcccCCCCchhhhhHHHH-hhhccCch-------------hhHHhhh---h-hccHHHHHHHHHhcccCCC-C-------
Q 017180 209 PIVFGRDSSMETRYGLLR-GTLRAPGV-------------GWMMYNM---L-VSNEKAIQSQYKSHVYSNP-D------- 262 (376)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~-~~~~~~~~-------------~~~~~~~---~-~~~~~~~~~~~~~~~~~~~-~------- 262 (376)
........... .....+.. ....... + ......+...+........ .
T Consensus 239 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (444)
T 2vat_A 239 -------GWCAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDA 311 (444)
T ss_dssp -------HHHHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC----------
T ss_pred -------ccchhHHHHHHHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCcccccccccccccc
Confidence 00000000000 00000000 0000000 0 0001111111111100000 0
Q ss_pred ------------C---CChHHHHHHHH----HHhccCCCchhHHHhhccCCCC---CcHHHHHHHHhcccCCCcEEEEEe
Q 017180 263 ------------N---VTPGIVESRYA----LTKRKGARYVPAAFLTGLLDPV---NSREEFLQLFADLEGKLPLLVVST 320 (376)
Q Consensus 263 ------------~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~Pvlii~G 320 (376)
. ......+.+.. ..........+........... ....+..+.+.++ ++|+|+|+|
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i--~~PvLvi~G 389 (444)
T 2vat_A 312 KKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMI--TQPALIICA 389 (444)
T ss_dssp -----------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTC--CSCEEEEEC
T ss_pred ccccccccccccccccCchhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcC--CCCEEEEEe
Confidence 0 00011111111 1111111111111111110000 0000145667888 999999999
Q ss_pred CCCCCCCHHHHHHHhcccCCceEEEeC-CC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 321 EGSPRRSKAEMEALKGAKGVTKFVEVP-GA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 321 ~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
++|.+++.+..+.+.+..+++++++++ ++ |++++|+|+++++.|.+||++.+
T Consensus 390 ~~D~~~p~~~~~~l~~~~p~~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~~l 443 (444)
T 2vat_A 390 RSDGLYSFDEHVEMGRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQSL 443 (444)
T ss_dssp TTCSSSCHHHHHHHHHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC--
T ss_pred CCCCCCCHHHHHHHHHHCCCcEEEEeCCCCCcchHHhCHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999 78 99999999999999999998764
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-29 Score=223.53 Aligned_cols=115 Identities=16% Similarity=0.139 Sum_probs=94.4
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVME 150 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~ 150 (376)
+|.+++|...|+++ +++|||+||++ ++...+ .....+... +|+||++|+||||+|+.+. ..++.++++
T Consensus 20 ~g~~l~y~~~G~~~---g~pvvllHG~~--~~~~~~-~~~~~~~~~----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 89 (313)
T 1azw_A 20 DRHTLYFEQCGNPH---GKPVVMLHGGP--GGGCND-KMRRFHDPA----KYRIVLFDQRGSGRSTPHADLVDNTTWDLV 89 (313)
T ss_dssp SSCEEEEEEEECTT---SEEEEEECSTT--TTCCCG-GGGGGSCTT----TEEEEEECCTTSTTSBSTTCCTTCCHHHHH
T ss_pred CCCEEEEEecCCCC---CCeEEEECCCC--CccccH-HHHHhcCcC----cceEEEECCCCCcCCCCCcccccccHHHHH
Confidence 58899999998654 67899999987 433211 122233222 8999999999999998543 468899999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
+|+.+++++++ .++++|+||||||.+|+.+|.++|++|+++|++++.
T Consensus 90 ~dl~~l~~~l~------~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 90 ADIERLRTHLG------VDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp HHHHHHHHHTT------CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred HHHHHHHHHhC------CCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 99999999997 778999999999999999999999999999999873
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-29 Score=221.85 Aligned_cols=114 Identities=15% Similarity=0.188 Sum_probs=97.2
Q ss_pred eeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHh-hhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHHHH
Q 017180 75 INIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQ-RVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKF 152 (376)
Q Consensus 75 ~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~-~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~~ 152 (376)
.+++|...|.+ +|+|||+||++ .+...|..+++.|++ . +|+||++|+||||.|+.+ ...++++++++|
T Consensus 27 ~~~~~~~~g~~----~p~lvllHG~~--~~~~~w~~~~~~L~~~~----~~~via~Dl~GhG~S~~~~~~~~~~~~~a~d 96 (316)
T 3c5v_A 27 DTFRVYKSGSE----GPVLLLLHGGG--HSALSWAVFTAAIISRV----QCRIVALDLRSHGETKVKNPEDLSAETMAKD 96 (316)
T ss_dssp EEEEEEEECSS----SCEEEEECCTT--CCGGGGHHHHHHHHTTB----CCEEEEECCTTSTTCBCSCTTCCCHHHHHHH
T ss_pred EEEEEEecCCC----CcEEEEECCCC--cccccHHHHHHHHhhcC----CeEEEEecCCCCCCCCCCCccccCHHHHHHH
Confidence 46788887743 67899999999 999999999999986 3 699999999999999854 357999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEecc
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAP 202 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p 202 (376)
+.++++++... ..++++|+||||||.+|+.+|.+ +|+ |+++|++++
T Consensus 97 l~~~l~~l~~~---~~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~ 144 (316)
T 3c5v_A 97 VGNVVEAMYGD---LPPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDV 144 (316)
T ss_dssp HHHHHHHHHTT---CCCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESC
T ss_pred HHHHHHHHhcc---CCCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcc
Confidence 99999998200 12689999999999999999995 576 999999986
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=212.23 Aligned_cols=226 Identities=12% Similarity=0.098 Sum_probs=156.2
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+++|||+||++ ++...|..++..|.+ +|+|+++|+||||.|+.+...++.+++++++.+++++++ .+
T Consensus 20 ~~~vv~~HG~~--~~~~~~~~~~~~l~~-----~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~------~~ 86 (267)
T 3fla_A 20 RARLVCLPHAG--GSASFFFPLAKALAP-----AVEVLAVQYPGRQDRRHEPPVDSIGGLTNRLLEVLRPFG------DR 86 (267)
T ss_dssp SEEEEEECCTT--CCGGGGHHHHHHHTT-----TEEEEEECCTTSGGGTTSCCCCSHHHHHHHHHHHTGGGT------TS
T ss_pred CceEEEeCCCC--CCchhHHHHHHHhcc-----CcEEEEecCCCCCCCCCCCCCcCHHHHHHHHHHHHHhcC------CC
Confidence 78999999999 999999999999988 799999999999999977678899999999999999986 78
Q ss_pred cEEEEecchHHHHHHHHHHhCCCC----cceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhcc
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVK----PTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSN 245 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~----v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (376)
+++|+||||||.+++.+|.++|++ +.+++++++................ ..+...+.........
T Consensus 87 ~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-------- 155 (267)
T 3fla_A 87 PLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASD---ERLVAELRKLGGSDAA-------- 155 (267)
T ss_dssp CEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCH---HHHHHHHHHTCHHHHH--------
T ss_pred ceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccch---HHHHHHHHHhcCcchh--------
Confidence 899999999999999999999986 8999999864311111000000000 0000000000000000
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCC
Q 017180 246 EKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPR 325 (376)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~ 325 (376)
. .. .++........... .......+... ....+ ++|+++|+|++|.+
T Consensus 156 --~----~~----------~~~~~~~~~~~~~~------~~~~~~~~~~~---------~~~~~--~~P~l~i~g~~D~~ 202 (267)
T 3fla_A 156 --M----LA----------DPELLAMVLPAIRS------DYRAVETYRHE---------PGRRV--DCPVTVFTGDHDPR 202 (267)
T ss_dssp --H----HH----------SHHHHHHHHHHHHH------HHHHHHHCCCC---------TTCCB--SSCEEEEEETTCTT
T ss_pred --h----cc----------CHHHHHHHHHHHHH------HHHhhhccccc---------ccCcC--CCCEEEEecCCCCC
Confidence 0 00 01111111111000 00000000000 01456 89999999999999
Q ss_pred CCHHHHHHHhcccCC-ceEEEeCCCCCCCCCChHHHHHHHHHHHHhhc
Q 017180 326 RSKAEMEALKGAKGV-TKFVEVPGALLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 326 ~~~~~~~~~~~~~~~-~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
++.+..+.+.+..++ +++++++++|+.+.++|+++++.|.+||++..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~~~~~~~~i~~fl~~~~ 250 (267)
T 3fla_A 203 VSVGEARAWEEHTTGPADLRVLPGGHFFLVDQAAPMIATMTEKLAGPA 250 (267)
T ss_dssp CCHHHHHGGGGGBSSCEEEEEESSSTTHHHHTHHHHHHHHHHHTC---
T ss_pred CCHHHHHHHHHhcCCCceEEEecCCceeeccCHHHHHHHHHHHhcccc
Confidence 999999999888887 99999998899999999999999999998764
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-28 Score=211.16 Aligned_cols=234 Identities=8% Similarity=0.035 Sum_probs=160.7
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHh--HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEW--RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVME 150 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~--~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 150 (376)
+|.+++|...+..++ .+|+|||+||++ ++...| ..+...|.+. ||+|+++|+||||.|+.+...++.++++
T Consensus 21 ~g~~l~~~~~~~~~~-~~~~vv~~HG~~--~~~~~~~~~~~~~~l~~~----g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 93 (270)
T 3llc_A 21 DARSIAALVRAPAQD-ERPTCIWLGGYR--SDMTGTKALEMDDLAASL----GVGAIRFDYSGHGASGGAFRDGTISRWL 93 (270)
T ss_dssp GCEEEEEEEECCSST-TSCEEEEECCTT--CCTTSHHHHHHHHHHHHH----TCEEEEECCTTSTTCCSCGGGCCHHHHH
T ss_pred CcceEEEEeccCCCC-CCCeEEEECCCc--cccccchHHHHHHHHHhC----CCcEEEeccccCCCCCCccccccHHHHH
Confidence 588999985543321 168999999999 775444 4477778665 9999999999999999766778999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh---CC---CCcceEEEeccCCCCCCCcccCCCCchhhhhHH
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK---NL---VKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGL 224 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~---~p---~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (376)
+|+.++++.++ .++++++|||+||.+++.+|.+ +| ++|+++|+++|... .
T Consensus 94 ~d~~~~~~~l~------~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~------------------~ 149 (270)
T 3llc_A 94 EEALAVLDHFK------PEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPD------------------F 149 (270)
T ss_dssp HHHHHHHHHHC------CSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTT------------------H
T ss_pred HHHHHHHHHhc------cCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCccc------------------c
Confidence 99999999986 7889999999999999999999 99 99999999998420 0
Q ss_pred HHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCC---hHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHH
Q 017180 225 LRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVT---PGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREE 301 (376)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (376)
..... .... ..................... ........... ....
T Consensus 150 ~~~~~---------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~--------- 197 (270)
T 3llc_A 150 TSDLI---------EPLL--GDRERAELAENGYFEEVSEYSPEPNIFTRALMEDG------------RANR--------- 197 (270)
T ss_dssp HHHTT---------GGGC--CHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHH------------HHTC---------
T ss_pred hhhhh---------hhhh--hhhhhhhhhccCcccChhhcccchhHHHHHHHhhh------------hhhh---------
Confidence 00000 0000 011111111111111000000 00000000000 0000
Q ss_pred HHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCC--ceEEEeCCC-CCCC-CCChHHHHHHHHHHHHhh
Q 017180 302 FLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGV--TKFVEVPGA-LLPQ-EEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 302 ~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~-H~~~-~e~pe~~~~~i~~fl~~~ 371 (376)
....+.++ ++|+++++|++|.+++.+..+.+.+..++ +++++++++ |+.. .+.++++.+.|.+||++.
T Consensus 198 ~~~~~~~~--~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 269 (270)
T 3llc_A 198 VMAGMIDT--GCPVHILQGMADPDVPYQHALKLVEHLPADDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEPR 269 (270)
T ss_dssp CTTSCCCC--CSCEEEEEETTCSSSCHHHHHHHHHTSCSSSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC--
T ss_pred hhhhhhcC--CCCEEEEecCCCCCCCHHHHHHHHHhcCCCCeeEEEeCCCcccccccccHHHHHHHHHHHhcCC
Confidence 11234566 89999999999999999999999888777 999999998 9644 577899999999999753
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-28 Score=201.54 Aligned_cols=185 Identities=17% Similarity=0.247 Sum_probs=161.1
Q ss_pred CceeEE---EEecccCCCCCCCcEEEecCCCCCccchHhHH--HHHHHHhhhCCcceEEEEeCCCCCcCC---CCCCCCC
Q 017180 73 NSINIY---YEKHERESPDPSKNILMIPTISDVSTVEEWRL--VAQDIVQRVGKVNWRATIVDWPGLGYS---DRPKMDY 144 (376)
Q Consensus 73 ~g~~l~---y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~--~~~~L~~~~~~~~~~Vi~~D~~G~G~S---~~~~~~~ 144 (376)
+|.+++ |...|+ +|+|||+||++ ++...|.. ++..|.+. ||+|+++|+||+|.| +.+...+
T Consensus 12 ~g~~l~~~~~~~~~~-----~~~vv~~hG~~--~~~~~~~~~~~~~~l~~~----G~~v~~~d~~g~g~s~~~~~~~~~~ 80 (207)
T 3bdi_A 12 NGTRVFQRKMVTDSN-----RRSIALFHGYS--FTSMDWDKADLFNNYSKI----GYNVYAPDYPGFGRSASSEKYGIDR 80 (207)
T ss_dssp TTEEEEEEEECCTTC-----CEEEEEECCTT--CCGGGGGGGTHHHHHHTT----TEEEEEECCTTSTTSCCCTTTCCTT
T ss_pred CCcEEEEEEEeccCC-----CCeEEEECCCC--CCccccchHHHHHHHHhC----CCeEEEEcCCcccccCcccCCCCCc
Confidence 478888 766663 78999999999 99999999 99999986 899999999999999 7666677
Q ss_pred -CHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhH
Q 017180 145 -NADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYG 223 (376)
Q Consensus 145 -~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~ 223 (376)
+.+++++++.++++.++ .++++++|||+||.+++.++.++|++++++++++|...
T Consensus 81 ~~~~~~~~~~~~~~~~~~------~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~------------------ 136 (207)
T 3bdi_A 81 GDLKHAAEFIRDYLKANG------VARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWV------------------ 136 (207)
T ss_dssp CCHHHHHHHHHHHHHHTT------CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSC------------------
T ss_pred chHHHHHHHHHHHHHHcC------CCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccc------------------
Confidence 99999999999999986 67899999999999999999999999999999998310
Q ss_pred HHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHH
Q 017180 224 LLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFL 303 (376)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (376)
. . . .
T Consensus 137 ----------------~-----~-~------------------------------------------------------~ 140 (207)
T 3bdi_A 137 ----------------E-----S-L------------------------------------------------------K 140 (207)
T ss_dssp ----------------G-----G-G------------------------------------------------------H
T ss_pred ----------------c-----c-h------------------------------------------------------h
Confidence 0 0 0 0
Q ss_pred HHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 304 QLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 304 ~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
..+.++ ++|+++++|++|..++.+..+.+.+..+++++++++++ |+.+.++++++.+.|.+||++
T Consensus 141 ~~~~~~--~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 141 GDMKKI--RQKTLLVWGSKDHVVPIALSKEYASIISGSRLEIVEGSGHPVYIEKPEEFVRITVDFLRN 206 (207)
T ss_dssp HHHTTC--CSCEEEEEETTCTTTTHHHHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred HHHhhc--cCCEEEEEECCCCccchHHHHHHHHhcCCceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence 123455 88999999999999999999999888899999999998 999999999999999999986
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-27 Score=215.67 Aligned_cols=125 Identities=12% Similarity=0.106 Sum_probs=106.5
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhh-----CCcceEEEEeCCCCCcCCCCCCC-CC
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRV-----GKVNWRATIVDWPGLGYSDRPKM-DY 144 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~-----~~~~~~Vi~~D~~G~G~S~~~~~-~~ 144 (376)
..+|.+|+|...+++.+ .+++|||+||++ ++...|..++..|.+.. ...+|+|+++|+||||.|+.+.. .+
T Consensus 74 ~i~g~~i~~~~~~~~~~-~~~plll~HG~~--~s~~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~~~~~~ 150 (388)
T 4i19_A 74 EIDGATIHFLHVRSPEP-DATPMVITHGWP--GTPVEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPLKSAGW 150 (388)
T ss_dssp EETTEEEEEEEECCSST-TCEEEEEECCTT--CCGGGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCCSSCCC
T ss_pred EECCeEEEEEEccCCCC-CCCeEEEECCCC--CCHHHHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCCCCCCC
Confidence 34599999987754322 167999999999 99999999999998720 00059999999999999996654 78
Q ss_pred CHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 145 NADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 145 ~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
+.+++++++.+++++++ .++++++||||||.+++.+|.++|++|+++++++|..
T Consensus 151 ~~~~~a~~~~~l~~~lg------~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 204 (388)
T 4i19_A 151 ELGRIAMAWSKLMASLG------YERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQT 204 (388)
T ss_dssp CHHHHHHHHHHHHHHTT------CSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCC
T ss_pred CHHHHHHHHHHHHHHcC------CCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCC
Confidence 99999999999999997 6789999999999999999999999999999998743
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=213.27 Aligned_cols=236 Identities=10% Similarity=0.079 Sum_probs=163.2
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFV 153 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l 153 (376)
|.+++|.. |. +|+|||+||++ ++...|..++..|.+. ||+|+++|+||||.|+.+...++.+++++|+
T Consensus 30 g~~~~~~~-g~-----~~~vv~~HG~~--~~~~~~~~~~~~l~~~----G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~ 97 (270)
T 3rm3_A 30 GAEPFYAE-NG-----PVGVLLVHGFT--GTPHSMRPLAEAYAKA----GYTVCLPRLKGHGTHYEDMERTTFHDWVASV 97 (270)
T ss_dssp TCCCEEEC-CS-----SEEEEEECCTT--CCGGGTHHHHHHHHHT----TCEEEECCCTTCSSCHHHHHTCCHHHHHHHH
T ss_pred CCcccccC-CC-----CeEEEEECCCC--CChhHHHHHHHHHHHC----CCEEEEeCCCCCCCCccccccCCHHHHHHHH
Confidence 77777774 33 78999999999 9999999999999997 8999999999999998554578999999999
Q ss_pred HHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCc
Q 017180 154 VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPG 233 (376)
Q Consensus 154 ~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (376)
.++++.+... .++++|+|||+||.+++.+|.++|+ |+++|+++|.... + ..... ......
T Consensus 98 ~~~i~~l~~~----~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~--~----------~~~~~---~~~~~~ 157 (270)
T 3rm3_A 98 EEGYGWLKQR----CQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDI--P----------AIAAG---MTGGGE 157 (270)
T ss_dssp HHHHHHHHTT----CSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCC--H----------HHHHH---SCC---
T ss_pred HHHHHHHHhh----CCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecc--c----------ccccc---hhcchh
Confidence 9999988511 5789999999999999999999999 9999999984310 0 00000 000000
Q ss_pred hhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCC
Q 017180 234 VGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKL 313 (376)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 313 (376)
....+.... . .+......... .............. ......+.+.++ ++
T Consensus 158 ~~~~~~~~~-~---~~~~~~~~~~~--~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~--~~ 206 (270)
T 3rm3_A 158 LPRYLDSIG-S---DLKNPDVKELA--YEKTPTASLLQLAR-----------------------LMAQTKAKLDRI--VC 206 (270)
T ss_dssp CCSEEECCC-C---CCSCTTCCCCC--CSEEEHHHHHHHHH-----------------------HHHHHHHTGGGC--CS
T ss_pred HHHHHHHhC-c---cccccchHhhc--ccccChhHHHHHHH-----------------------HHHHHHhhhhhc--CC
Confidence 000000000 0 00000000000 00000001110000 011244567778 99
Q ss_pred cEEEEEeCCCCCCCHHHHHHHhcccCCc--eEEEeCCC-CCCCCCCh-HHHHHHHHHHHHhhc
Q 017180 314 PLLVVSTEGSPRRSKAEMEALKGAKGVT--KFVEVPGA-LLPQEEYP-AMVAQELYQFLQQTF 372 (376)
Q Consensus 314 Pvlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~-H~~~~e~p-e~~~~~i~~fl~~~~ 372 (376)
|+|+++|++|.+++.+..+.+.+..++. ++++++++ |+++.+.+ +++.+.|.+||++..
T Consensus 207 P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 269 (270)
T 3rm3_A 207 PALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKHA 269 (270)
T ss_dssp CEEEEEETTCSSSCTTHHHHHHHHSCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCcccCHHHHHHHHHhcCCCcceEEEeCCCCcccccCccHHHHHHHHHHHHHhcC
Confidence 9999999999999999999888777655 99999998 99999987 899999999998763
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-29 Score=219.19 Aligned_cols=251 Identities=10% Similarity=0.036 Sum_probs=158.0
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKF 152 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~ 152 (376)
+.+++|...+ + +|+|||+||+|..++...|..+++.|.+ +|+|+++|+||||.|+ .+...++.+++++|
T Consensus 30 ~~~~~~~~~~-~----~p~vv~lHG~G~~~~~~~~~~~~~~L~~-----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 99 (292)
T 3l80_A 30 LGPIYTCHRE-G----NPCFVFLSGAGFFSTADNFANIIDKLPD-----SIGILTIDAPNSGYSPVSNQANVGLRDWVNA 99 (292)
T ss_dssp TSCEEEEEEC-C----SSEEEEECCSSSCCHHHHTHHHHTTSCT-----TSEEEEECCTTSTTSCCCCCTTCCHHHHHHH
T ss_pred CceEEEecCC-C----CCEEEEEcCCCCCcHHHHHHHHHHHHhh-----cCeEEEEcCCCCCCCCCCCcccccHHHHHHH
Confidence 4456665332 2 6799999965422778899999999986 8999999999999999 55568999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
+.+++++++ .++++|+||||||.+++.+|.++|++|+++|+++|......-..+.... .... ........
T Consensus 100 l~~~l~~~~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~ 169 (292)
T 3l80_A 100 ILMIFEHFK------FQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDL-YPQL---ALRRQKLK 169 (292)
T ss_dssp HHHHHHHSC------CSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSS-SHHH---HHHHHTCC
T ss_pred HHHHHHHhC------CCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhcccccc-chhH---HHHHHHHh
Confidence 999999997 6799999999999999999999999999999999742100000000000 0000 00000000
Q ss_pred chhhHHhhhhhccHH-HHHHHHHhcccCCCCCCChHHH-------HHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHH
Q 017180 233 GVGWMMYNMLVSNEK-AIQSQYKSHVYSNPDNVTPGIV-------ESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQ 304 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (376)
.... .. .+..... .. +.++.. ............... ....... ...+..
T Consensus 170 ~~~~---------~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~--~~~~~~- 226 (292)
T 3l80_A 170 TAAD---------RLNYLKDLSR-SH------FSSQQFKQLWRGYDYCQRQLNDVQSLPD----FKIRLAL--GEEDFK- 226 (292)
T ss_dssp SHHH---------HHHHHHHHHH-HH------SCHHHHHHHHHHHHHHHHHHHTTTTSTT----CCSSCCC--CGGGGC-
T ss_pred ccCc---------hhhhHhhccc-cc------cCHHHHHHhHHHHHHHHHHHHhhhhccc----cchhhhh--cchhhh-
Confidence 0000 00 1110000 00 111111 111111111110000 0000000 000011
Q ss_pred HHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 305 LFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 305 ~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
..+..++|+|+|+|++|..++.+ . .+.+..++.+ ++++++ |+++.|+|+++++.|.+||++..
T Consensus 227 --~~l~~~~P~lii~g~~D~~~~~~-~-~~~~~~~~~~-~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 290 (292)
T 3l80_A 227 --TGISEKIPSIVFSESFREKEYLE-S-EYLNKHTQTK-LILCGQHHYLHWSETNSILEKVEQLLSNHE 290 (292)
T ss_dssp --CCCCTTSCEEEEECGGGHHHHHT-S-TTCCCCTTCE-EEECCSSSCHHHHCHHHHHHHHHHHHHTCT
T ss_pred --hccCCCCCEEEEEccCccccchH-H-HHhccCCCce-eeeCCCCCcchhhCHHHHHHHHHHHHHhcc
Confidence 12212689999999999999888 6 7778888989 899999 99999999999999999999764
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=205.01 Aligned_cols=190 Identities=18% Similarity=0.274 Sum_probs=160.4
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHH--HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRL--VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVME 150 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~--~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 150 (376)
+|.+++|...++...+.+|+|||+||++ ++...|.. +++.|.+. ||+|+++|+||||.|+.+....+.++++
T Consensus 15 ~g~~l~~~~~~p~~~~~~~~vv~~hG~~--~~~~~~~~~~~~~~l~~~----G~~v~~~d~~g~g~s~~~~~~~~~~~~~ 88 (210)
T 1imj_A 15 QGQALFFREALPGSGQARFSVLLLHGIR--FSSETWQNLGTLHRLAQA----GYRAVAIDLPGLGHSKEAAAPAPIGELA 88 (210)
T ss_dssp TTEEECEEEEECSSSCCSCEEEECCCTT--CCHHHHHHHTHHHHHHHT----TCEEEEECCTTSGGGTTSCCSSCTTSCC
T ss_pred CCeEEEEEEeCCCCCCCCceEEEECCCC--CccceeecchhHHHHHHC----CCeEEEecCCCCCCCCCCCCcchhhhcc
Confidence 3889999987654333378999999999 99999998 58899886 8999999999999998665566677766
Q ss_pred --HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 151 --KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 151 --~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
+++.+++++++ .++++++|||+||.+++.++.++|++++++|+++|...
T Consensus 89 ~~~~~~~~~~~~~------~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~----------------------- 139 (210)
T 1imj_A 89 PGSFLAAVVDALE------LGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICT----------------------- 139 (210)
T ss_dssp CTHHHHHHHHHHT------CCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCG-----------------------
T ss_pred hHHHHHHHHHHhC------CCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcc-----------------------
Confidence 89999999886 67899999999999999999999999999999998310
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
. . + ....+.+
T Consensus 140 -----------~-----~-----------~-------------------------------------------~~~~~~~ 149 (210)
T 1imj_A 140 -----------D-----K-----------I-------------------------------------------NAANYAS 149 (210)
T ss_dssp -----------G-----G-----------S-------------------------------------------CHHHHHT
T ss_pred -----------c-----c-----------c-------------------------------------------cchhhhh
Confidence 0 0 0 0123445
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
+ ++|+++++|++|. ++.+..+.+ +..+++++++++++ |+++.++|+++.+.|.+||++.
T Consensus 150 ~--~~p~l~i~g~~D~-~~~~~~~~~-~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~ 209 (210)
T 1imj_A 150 V--KTPALIVYGDQDP-MGQTSFEHL-KQLPNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 209 (210)
T ss_dssp C--CSCEEEEEETTCH-HHHHHHHHH-TTSSSEEEEEETTCCTTHHHHCHHHHHHHHHHHHHTC
T ss_pred C--CCCEEEEEcCccc-CCHHHHHHH-hhCCCCCEEEecCCCcchhhcCHHHHHHHHHHHHHhc
Confidence 5 8999999999999 999999999 88899999999998 9999999999999999999864
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.9e-28 Score=219.09 Aligned_cols=280 Identities=13% Similarity=0.071 Sum_probs=162.0
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhh--CCcceEEEEeCCCCCcCCCCCC--CCCCH
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRV--GKVNWRATIVDWPGLGYSDRPK--MDYNA 146 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~--~~~~~~Vi~~D~~G~G~S~~~~--~~~~~ 146 (376)
..+|.+|+|...|++.++ +++|||+||++ ++...|..+++.|.+.. ...||+||++|+||||.|+.+. ..++.
T Consensus 91 ~i~g~~i~~~~~~~~~~~-~~pllllHG~~--~s~~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~~~~~~~~ 167 (408)
T 3g02_A 91 EIEGLTIHFAALFSERED-AVPIALLHGWP--GSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKDFGL 167 (408)
T ss_dssp EETTEEEEEEEECCSCTT-CEEEEEECCSS--CCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSCSSSCCCH
T ss_pred EECCEEEEEEEecCCCCC-CCeEEEECCCC--CcHHHHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCCCCCCCCH
Confidence 346999999998864321 67899999999 99999999999999731 0016899999999999999654 68999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCC-cEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHH
Q 017180 147 DVMEKFVVDLINAPDSPVSSSES-DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLL 225 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~-~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~ 225 (376)
+.+++++.+++++++ .+ +++++||||||.+++.+|.++|+.+..++.+.+.............. +.....+
T Consensus 168 ~~~a~~~~~l~~~lg------~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~~~~~~~~~l~--~~e~~~~ 239 (408)
T 3g02_A 168 MDNARVVDQLMKDLG------FGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAPPEGPSIESLS--AAEKEGI 239 (408)
T ss_dssp HHHHHHHHHHHHHTT------CTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCCTTCCCGGGSC--HHHHHHH
T ss_pred HHHHHHHHHHHHHhC------CCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCCcccccccCCC--HHHHHHH
Confidence 999999999999997 55 89999999999999999999976444444333321111000000000 0011111
Q ss_pred Hhhhc--cCchhhHHhh---------hhhccHHHHHHHHHhcc--cCCCCCCC-hHHHHHHHHHHhcc---CCCchhHHH
Q 017180 226 RGTLR--APGVGWMMYN---------MLVSNEKAIQSQYKSHV--YSNPDNVT-PGIVESRYALTKRK---GARYVPAAF 288 (376)
Q Consensus 226 ~~~~~--~~~~~~~~~~---------~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~ 288 (376)
..... ....+..... .+...+..+..++.... +.+. .++ ++++.......... .....+...
T Consensus 240 ~~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~-~~~~d~ll~~v~~y~~t~~~~~s~~~y~e~ 318 (408)
T 3g02_A 240 ARMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDK-PLPSETILEMVSLYWLTESFPRAIHTYREW 318 (408)
T ss_dssp HHHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSS-CCCHHHHHHHHHHHHHTTHHHHHGGGHHHH
T ss_pred HHHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCC-CCCHHHHHHHHHHHHhhccchhHHHHHHhh
Confidence 10000 0000000000 00000111111111111 1111 222 22222211110100 000111111
Q ss_pred hhccCCCCCcHHHHHH----HHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHH
Q 017180 289 LTGLLDPVNSREEFLQ----LFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQE 363 (376)
Q Consensus 289 ~~~~~~~~~~~~~~~~----~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~ 363 (376)
.. ... ..... .+..+ ++|+++++|.+|...+++...+.. .+.+.+.++++| |++++|+|+.+++.
T Consensus 319 ~~---~~~---~~~~~~~~~~l~~i--~vPt~v~~~~~D~~~~p~~~~~~~--~~~~~~~~~~~gGHf~~lE~Pe~~~~~ 388 (408)
T 3g02_A 319 VP---TAS---APNGATPYQKELYI--HKPFGFSFFPKDLVPVPRSWIATT--GNLVFFRDHAEGGHFAALERPRELKTD 388 (408)
T ss_dssp TT---C----------CTTTTTTCE--EEEEEEEECTBSSSCCCHHHHGGG--EEEEEEEECSSCBSCHHHHCHHHHHHH
T ss_pred cc---ccc---ccccccccccCCCc--CCCEEEEeCCcccccCcHHHHHhc--CCeeEEEECCCCcCchhhhCHHHHHHH
Confidence 00 000 00000 24566 899999999999776655443333 344778899988 99999999999999
Q ss_pred HHHHHHhhc
Q 017180 364 LYQFLQQTF 372 (376)
Q Consensus 364 i~~fl~~~~ 372 (376)
|.+||.+..
T Consensus 389 l~~fl~~~~ 397 (408)
T 3g02_A 389 LTAFVEQVW 397 (408)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHH
Confidence 999998763
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=216.48 Aligned_cols=278 Identities=12% Similarity=0.101 Sum_probs=165.0
Q ss_pred CCceeEEEEecccCCC-----CCCCcEEEecCCCCCccchHhHHHHH------HHHhhhCCcceEEEEeCCCCCcCCCC-
Q 017180 72 ENSINIYYEKHERESP-----DPSKNILMIPTISDVSTVEEWRLVAQ------DIVQRVGKVNWRATIVDWPGLGYSDR- 139 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~-----~~~~~vvllHG~~~~~~~~~~~~~~~------~L~~~~~~~~~~Vi~~D~~G~G~S~~- 139 (376)
.+|.+++|....++.. ..+|+|||+||++ ++...|..+.. .|++. ||+|+++|+||||.|+.
T Consensus 35 ~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~--~~~~~~~~~~~~~~~a~~l~~~----G~~vi~~D~~G~G~S~~~ 108 (377)
T 1k8q_A 35 EDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLL--ASATNWISNLPNNSLAFILADA----GYDVWLGNSRGNTWARRN 108 (377)
T ss_dssp TTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTT--CCGGGGSSSCTTTCHHHHHHHT----TCEEEECCCTTSTTSCEE
T ss_pred CCCCEEEEEEecCCCCCccccCCCCeEEEECCCC--CchhhhhcCCCcccHHHHHHHC----CCCEEEecCCCCCCCCCC
Confidence 3577887776633211 1278999999999 88888877665 88886 89999999999999985
Q ss_pred ----CCC----CCCHHHHHH-HHHHHHh----CCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCC---CcceEEEeccC
Q 017180 140 ----PKM----DYNADVMEK-FVVDLIN----APDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV---KPTAIAAVAPT 203 (376)
Q Consensus 140 ----~~~----~~~~~~~~~-~l~~~l~----~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~p~ 203 (376)
+.. .++.+++++ |+.++++ +++ .++++|+||||||.+++.+|.++|+ +|+++|+++|.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~------~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~ 182 (377)
T 1k8q_A 109 LYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTG------QDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPV 182 (377)
T ss_dssp SSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHC------CSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCC
T ss_pred CCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcC------cCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCc
Confidence 322 689999998 8877655 454 5789999999999999999999998 89999999985
Q ss_pred CCCCCCcccCCCCchhhhh----HHHHhhhc----cCc--hhhHHhhhhhcc---HHHHHHHHHhcccCCCCCCChHHHH
Q 017180 204 WAGPLPIVFGRDSSMETRY----GLLRGTLR----APG--VGWMMYNMLVSN---EKAIQSQYKSHVYSNPDNVTPGIVE 270 (376)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~----~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (376)
...... ........ ..+...+. .+. ....+...+... ..............+.....++...
T Consensus 183 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (377)
T 1k8q_A 183 ATVKYT-----ETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLD 257 (377)
T ss_dssp SCCSSC-----CSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHH
T ss_pred hhcccc-----hhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHH
Confidence 321100 00000000 00000000 000 000000000000 0001100000000111122222222
Q ss_pred HHHHHHhccCCC--chhHHHh----hc-cCCCC-CcHH-HH---------HHHHhcccCCCcEEEEEeCCCCCCCHHHHH
Q 017180 271 SRYALTKRKGAR--YVPAAFL----TG-LLDPV-NSRE-EF---------LQLFADLEGKLPLLVVSTEGSPRRSKAEME 332 (376)
Q Consensus 271 ~~~~~~~~~~~~--~~~~~~~----~~-~~~~~-~~~~-~~---------~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~ 332 (376)
.+.... +... .....+. .. ..... .... .. ...+.++ ++|+|+|+|++|.+++.+..+
T Consensus 258 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~P~lii~G~~D~~~~~~~~~ 333 (377)
T 1k8q_A 258 VYLSHN--PAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDM--HVPIAVWNGGNDLLADPHDVD 333 (377)
T ss_dssp HHHTTC--CCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGC--CSCEEEEEETTCSSSCHHHHH
T ss_pred HHhccC--CCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhC--CCCEEEEEeCCCcccCHHHHH
Confidence 221110 0000 0000000 00 00000 0000 01 1126777 999999999999999999999
Q ss_pred HHhcccCCce-EEEeCCC-CCCCC---CChHHHHHHHHHHHHh
Q 017180 333 ALKGAKGVTK-FVEVPGA-LLPQE---EYPAMVAQELYQFLQQ 370 (376)
Q Consensus 333 ~~~~~~~~~~-~~~~~~~-H~~~~---e~pe~~~~~i~~fl~~ 370 (376)
.+.+..++.+ +++++++ |++++ ++|+++.+.|.+||++
T Consensus 334 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 334 LLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp HHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred HHHHhCcCcccEEecCCCCceEEEecCCcHHHHHHHHHHHhcc
Confidence 9999999887 9999998 99885 8999999999999975
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=203.83 Aligned_cols=221 Identities=10% Similarity=0.053 Sum_probs=154.2
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CCC-CHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MDY-NADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~-~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
+++|||+||++ ++...|..++..|.+. ||+|+++|+||||.|+... ... +.+++.+|+.++++.+...
T Consensus 22 ~~~vv~~HG~~--~~~~~~~~~~~~l~~~----G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~---- 91 (251)
T 3dkr_A 22 DTGVVLLHAYT--GSPNDMNFMARALQRS----GYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAK---- 91 (251)
T ss_dssp SEEEEEECCTT--CCGGGGHHHHHHHHHT----TCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTT----
T ss_pred CceEEEeCCCC--CCHHHHHHHHHHHHHC----CCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHHh----
Confidence 67899999999 9999999999999986 8999999999999996332 233 8888999999998887521
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEK 247 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (376)
.++++++||||||.+++.+|.++|+.++++++++|....... ..... ... ..
T Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~-----------------------~~~~~-~~~----~~ 143 (251)
T 3dkr_A 92 YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHH-----------------------LVPGF-LKY----AE 143 (251)
T ss_dssp CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBC-----------------------HHHHH-HHH----HH
T ss_pred cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccch-----------------------hhHHH-HHH----HH
Confidence 458999999999999999999999999999999885311000 00000 000 00
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCC
Q 017180 248 AIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRS 327 (376)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~ 327 (376)
.+.... ..++ ..+......... ...+.. ......+.+.++ ++|+++++|++|.+++
T Consensus 144 ~~~~~~----~~~~---~~~~~~~~~~~~--------~~~~~~-------~~~~~~~~~~~~--~~P~l~i~g~~D~~~~ 199 (251)
T 3dkr_A 144 YMNRLA----GKSD---ESTQILAYLPGQ--------LAAIDQ-------FATTVAADLNLV--KQPTFIGQAGQDELVD 199 (251)
T ss_dssp HHHHHH----TCCC---CHHHHHHHHHHH--------HHHHHH-------HHHHHHHTGGGC--CSCEEEEEETTCSSBC
T ss_pred HHHhhc----ccCc---chhhHHhhhHHH--------HHHHHH-------HHHHHhcccccc--CCCEEEEecCCCcccC
Confidence 000000 0000 111111100000 000000 001134556777 8999999999999999
Q ss_pred HHHHHHHhcccCC---ceEEEeCCC-CCCCCCC-hHHHHHHHHHHHHhhc
Q 017180 328 KAEMEALKGAKGV---TKFVEVPGA-LLPQEEY-PAMVAQELYQFLQQTF 372 (376)
Q Consensus 328 ~~~~~~~~~~~~~---~~~~~~~~~-H~~~~e~-pe~~~~~i~~fl~~~~ 372 (376)
.+..+.+.+..++ +++++++++ |+.+.+. ++++.+.|.+||++..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 249 (251)
T 3dkr_A 200 GRLAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEEDVIAFMQQEN 249 (251)
T ss_dssp TTHHHHHHHHCTTCSCEEEEEETTCCSCTTTSTTHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHhcCCCCceEEEeCCCCcccccccchhHHHHHHHHHHHhhc
Confidence 9888888766554 489999998 9998885 9999999999999864
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-28 Score=214.18 Aligned_cols=237 Identities=10% Similarity=0.019 Sum_probs=154.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+++|||+||++ ++...|..+++.|.+... ||+|+++|+||||.|..+. .++.+++++++.++++.+ .+
T Consensus 36 ~~~vvllHG~~--~~~~~~~~~~~~L~~~~~--g~~vi~~D~~G~G~s~~~~-~~~~~~~~~~l~~~~~~~-------~~ 103 (302)
T 1pja_A 36 YKPVIVVHGLF--DSSYSFRHLLEYINETHP--GTVVTVLDLFDGRESLRPL-WEQVQGFREAVVPIMAKA-------PQ 103 (302)
T ss_dssp CCCEEEECCTT--CCGGGGHHHHHHHHHHST--TCCEEECCSSCSGGGGSCH-HHHHHHHHHHHHHHHHHC-------TT
T ss_pred CCeEEEECCCC--CChhHHHHHHHHHHhcCC--CcEEEEeccCCCccchhhH-HHHHHHHHHHHHHHhhcC-------CC
Confidence 77899999999 999999999999998311 5999999999999998653 357788888888888876 36
Q ss_pred cEEEEecchHHHHHHHHHHhCCC-CcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHH
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLV-KPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKA 248 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (376)
+++++||||||.+++.+|.++|+ +|+++|++++...+.... .. ....... ............. ..
T Consensus 104 ~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~-------~~----~~~~~~~-~~~~~~~~~~~~~--~~ 169 (302)
T 1pja_A 104 GVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGD-------TD----YLKWLFP-TSMRSNLYRICYS--PW 169 (302)
T ss_dssp CEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSC-------CH----HHHHHCT-TCCHHHHHHHHTS--TT
T ss_pred cEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCccccccc-------ch----hhhhHHH-HHHHHHHhhccch--HH
Confidence 79999999999999999999999 799999999854221110 00 0000000 0000000000000 00
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCH
Q 017180 249 IQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSK 328 (376)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~ 328 (376)
.........+.+ +...+.+.. ...+...+...... ....++.+.+.++ + |+++|+|++|.++++
T Consensus 170 ~~~~~~~~~~~~-----~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~l~~i--~-P~lii~G~~D~~v~~ 233 (302)
T 1pja_A 170 GQEFSICNYWHD-----PHHDDLYLN-------ASSFLALINGERDH-PNATVWRKNFLRV--G-HLVLIGGPDDGVITP 233 (302)
T ss_dssp GGGSTGGGGBCC-----TTCHHHHHH-------HCSSHHHHTTSSCC-TTHHHHHHHHTTC--S-EEEEEECTTCSSSSS
T ss_pred HHHhhhhhcccC-----hhhhhhhhc-------cchHHHHhhcCCcc-ccchhHHHHHhcc--C-cEEEEEeCCCCccch
Confidence 000000000100 110111111 00111111111111 1222356778889 8 999999999999998
Q ss_pred HHHHHHhcccCC---------------------------ceEEEeCCC-CCCCCCChHHHHHHHHHHH
Q 017180 329 AEMEALKGAKGV---------------------------TKFVEVPGA-LLPQEEYPAMVAQELYQFL 368 (376)
Q Consensus 329 ~~~~~~~~~~~~---------------------------~~~~~~~~~-H~~~~e~pe~~~~~i~~fl 368 (376)
+..+.+.+..++ +++++++++ |+++.|+|+++++.|.+||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 234 WQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPWL 301 (302)
T ss_dssp GGGGGTCEECTTCCEECGGGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTGGGC
T ss_pred hHhhHhhhcCCcccccchhhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHHHHHHHHHhc
Confidence 888888766665 899999998 9999999999999999987
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=209.05 Aligned_cols=217 Identities=15% Similarity=0.075 Sum_probs=147.1
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
++|||+||++ ++...|..++..|.+ +|+|+++|+||||.|+.+...++++++++++.++++++. ..++
T Consensus 52 ~~lvllHG~~--~~~~~~~~l~~~L~~-----~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~~~-----~~~~ 119 (280)
T 3qmv_A 52 LRLVCFPYAG--GTVSAFRGWQERLGD-----EVAVVPVQLPGRGLRLRERPYDTMEPLAEAVADALEEHR-----LTHD 119 (280)
T ss_dssp EEEEEECCTT--CCGGGGTTHHHHHCT-----TEEEEECCCTTSGGGTTSCCCCSHHHHHHHHHHHHHHTT-----CSSS
T ss_pred ceEEEECCCC--CChHHHHHHHHhcCC-----CceEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-----CCCC
Confidence 7899999999 999999999999998 899999999999999877678899999999999999983 2688
Q ss_pred EEEEecchHHHHHHHHHHhCCCCcc----eEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccH
Q 017180 171 LVIFGGGHAATLTVRAAKKNLVKPT----AIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNE 246 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~~p~~v~----~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (376)
++|+||||||.+|+.+|.++|+++. .++++++.. +....... . . .. ...
T Consensus 120 ~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~----p~~~~~~~-~--------------------~-~~-~~~ 172 (280)
T 3qmv_A 120 YALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRA----PHLYGDRA-D--------------------H-TL-SDT 172 (280)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCC----GGGCSCCC-G--------------------G-GS-CHH
T ss_pred EEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCC----CCCcCccc-c--------------------c-cc-CHH
Confidence 9999999999999999999888877 777776421 10000000 0 0 00 001
Q ss_pred HHHHHHHHhcccCCCCCC-----ChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeC
Q 017180 247 KAIQSQYKSHVYSNPDNV-----TPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTE 321 (376)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~ 321 (376)
.... .+........... .......+... ......+.. ..+..+ ++|+++|+|+
T Consensus 173 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~---------~~~~~i--~~P~l~i~G~ 230 (280)
T 3qmv_A 173 ALRE-VIRDLGGLDDADTLGAAYFDRRLPVLRAD----------LRACERYDW---------HPRPPL--DCPTTAFSAA 230 (280)
T ss_dssp HHHH-HHHHHTCCC---------CCTTHHHHHHH----------HHHHHTCCC---------CCCCCB--CSCEEEEEEE
T ss_pred HHHH-HHHHhCCCChhhhcCHHHHHHHHHHHHHH----------HHHHHhccc---------cCCCce--ecCeEEEEec
Confidence 1111 1110000000000 00000000000 000000000 013456 8999999999
Q ss_pred CCCCCCHHHHHHHhcccCC-ceEEEeCCCCCCCC--CChHHHHHHHHHHH
Q 017180 322 GSPRRSKAEMEALKGAKGV-TKFVEVPGALLPQE--EYPAMVAQELYQFL 368 (376)
Q Consensus 322 ~D~~~~~~~~~~~~~~~~~-~~~~~~~~~H~~~~--e~pe~~~~~i~~fl 368 (376)
+|.+++.+..+.+.+..++ .++++++++|+.++ ++|+++++.|.+||
T Consensus 231 ~D~~~~~~~~~~~~~~~~~~~~~~~~~ggH~~~~~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 231 ADPIATPEMVEAWRPYTTGSFLRRHLPGNHFFLNGGPSRDRLLAHLGTEL 280 (280)
T ss_dssp ECSSSCHHHHHTTGGGBSSCEEEEEEEEETTGGGSSHHHHHHHHHHHTTC
T ss_pred CCCCcChHHHHHHHHhcCCceEEEEecCCCeEEcCchhHHHHHHHHHhhC
Confidence 9999999999988888776 57777775599888 88999999998875
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-26 Score=209.67 Aligned_cols=121 Identities=7% Similarity=0.051 Sum_probs=99.4
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhH----------------HHHHHHHhhhCCcceEEEEeCCCCCc
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWR----------------LVAQDIVQRVGKVNWRATIVDWPGLG 135 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~----------------~~~~~L~~~~~~~~~~Vi~~D~~G~G 135 (376)
.+|+.++|...+.++ +|+|||+||++ ++...|. .++..|.+. ||+|+++|+||||
T Consensus 35 ~~~~~~~~~~~~~~~---~~~vv~~hG~~--~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~----g~~v~~~d~~G~G 105 (354)
T 2rau_A 35 YDIISLHKVNLIGGG---NDAVLILPGTW--SSGEQLVTISWNGVHYTIPDYRKSIVLYLARN----GFNVYTIDYRTHY 105 (354)
T ss_dssp TCEEEEEEEEETTCC---EEEEEEECCTT--CCHHHHHHSEETTEECSCCCGGGCHHHHHHHT----TEEEEEEECGGGG
T ss_pred CCceEEEeecccCCC---CCEEEEECCCC--CCccccccccccccccccccchhhHHHHHHhC----CCEEEEecCCCCC
Confidence 447778777765443 78999999999 8887665 889999886 8999999999999
Q ss_pred CCCCCCC-------CCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhC-CCCcceEEEeccC
Q 017180 136 YSDRPKM-------DYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN-LVKPTAIAAVAPT 203 (376)
Q Consensus 136 ~S~~~~~-------~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~-p~~v~~lvl~~p~ 203 (376)
.|+.+.. .++.+++++|+.++++.+... ...++++++||||||.+++.+|.++ |++|+++|++++.
T Consensus 106 ~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~ 179 (354)
T 2rau_A 106 VPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRD--SGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGG 179 (354)
T ss_dssp CCTTCCGGGGGGGTTCSHHHHHHHHHHHHHHHHHH--HCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCS
T ss_pred CCCcccccccccccCCcHHHHHHHHHHHHHHHHHh--cCCceEEEEEECHhHHHHHHHHHhcCccccceEEEeccc
Confidence 9985543 688899999999988874100 0157899999999999999999999 9999999999764
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.8e-27 Score=204.09 Aligned_cols=223 Identities=12% Similarity=0.051 Sum_probs=162.1
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
+|.++.+...++.. .|+|||+||++ ++...|..++..|.+. ||.|+++|+||||.|+.+...++.+.+++|
T Consensus 14 ~g~~l~~~~~~p~~---~p~vv~~HG~~--~~~~~~~~~~~~l~~~----g~~v~~~d~~G~g~s~~~~~~~~~~~~~~d 84 (290)
T 3ksr_A 14 GQDELSGTLLTPTG---MPGVLFVHGWG--GSQHHSLVRAREAVGL----GCICMTFDLRGHEGYASMRQSVTRAQNLDD 84 (290)
T ss_dssp TTEEEEEEEEEEES---EEEEEEECCTT--CCTTTTHHHHHHHHTT----TCEEECCCCTTSGGGGGGTTTCBHHHHHHH
T ss_pred CCeEEEEEEecCCC---CcEEEEeCCCC--CCcCcHHHHHHHHHHC----CCEEEEeecCCCCCCCCCcccccHHHHHHH
Confidence 47788887777652 78999999999 9999999999999987 999999999999999876677889999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
+.++++.+........++++|+||||||.+++.++.++| ++++++++|.......+ ..+
T Consensus 85 ~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~-------------------~~~ 143 (290)
T 3ksr_A 85 IKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHW-------------------DQP 143 (290)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCT-------------------TSB
T ss_pred HHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhh-------------------hcc
Confidence 999988875221111357999999999999999999988 78999998853111000 000
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCC
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGK 312 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 312 (376)
...... ...+.. +..... .. ........+.++ +
T Consensus 144 ---~~~~~~----~~~~~~-~~~~~~-----------------------------------~~--~~~~~~~~~~~~--~ 176 (290)
T 3ksr_A 144 ---KVSLNA----DPDLMD-YRRRAL-----------------------------------AP--GDNLALAACAQY--K 176 (290)
T ss_dssp ---HHHHHH----STTHHH-HTTSCC-----------------------------------CG--GGCHHHHHHHHC--C
T ss_pred ---cccccC----Chhhhh-hhhhhh-----------------------------------hh--ccccHHHHHHhc--C
Confidence 000000 000000 000000 00 011134456777 9
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHhcccCC---ceEEEeCCC-CCCCC-CChHHHHHHHHHHHHhhc
Q 017180 313 LPLLVVSTEGSPRRSKAEMEALKGAKGV---TKFVEVPGA-LLPQE-EYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 313 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~-H~~~~-e~pe~~~~~i~~fl~~~~ 372 (376)
+|+|+|+|++|.+++.+..+.+.+..++ +++++++++ |+... +.++++.+.|.+||.+.+
T Consensus 177 ~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 241 (290)
T 3ksr_A 177 GDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHALSVKEHQQEYTRALIDWLTEMV 241 (290)
T ss_dssp SEEEEEEETTCSSSCHHHHHHHHHHTTTSSEEEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCcccChHHHHHHHHHhccCCCceEEEcCCCCCCCCcchHHHHHHHHHHHHHHHHh
Confidence 9999999999999999988888766544 569999998 98755 488999999999998865
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.1e-26 Score=191.05 Aligned_cols=195 Identities=13% Similarity=0.108 Sum_probs=154.6
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccch--HhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC----CCCCH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVE--EWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK----MDYNA 146 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~--~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~----~~~~~ 146 (376)
+|.++.+....+..+ .|+||++||++ ++.. .|..++..|.+. ||.|+++|+||+|.|.... ..++.
T Consensus 20 ~g~~l~~~~~~p~~~--~p~vv~~hG~~--~~~~~~~~~~~~~~l~~~----G~~v~~~d~~g~g~s~~~~~~~~~~~~~ 91 (223)
T 2o2g_A 20 GEVKLKGNLVIPNGA--TGIVLFAHGSG--SSRYSPRNRYVAEVLQQA----GLATLLIDLLTQEEEEIDLRTRHLRFDI 91 (223)
T ss_dssp TTEEEEEEEECCTTC--CEEEEEECCTT--CCTTCHHHHHHHHHHHHH----TCEEEEECSSCHHHHHHHHHHCSSTTCH
T ss_pred CCeEEEEEEecCCCC--ceEEEEecCCC--CCCCccchHHHHHHHHHC----CCEEEEEcCCCcCCCCccchhhcccCcH
Confidence 577888777665432 78999999999 6665 456788899886 8999999999999987432 23788
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHH
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLR 226 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 226 (376)
+++++|+.++++.+.........+++++|||+||.+++.++.++|++++++|+++|..
T Consensus 92 ~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~---------------------- 149 (223)
T 2o2g_A 92 GLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRP---------------------- 149 (223)
T ss_dssp HHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCG----------------------
T ss_pred HHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCC----------------------
Confidence 9999999988887752221234589999999999999999999999999999998720
Q ss_pred hhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHH
Q 017180 227 GTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLF 306 (376)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (376)
... ...+
T Consensus 150 -------------~~~------------------------------------------------------------~~~~ 156 (223)
T 2o2g_A 150 -------------DLA------------------------------------------------------------PSAL 156 (223)
T ss_dssp -------------GGC------------------------------------------------------------TTTG
T ss_pred -------------CcC------------------------------------------------------------HHHH
Confidence 000 0023
Q ss_pred hcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCC-CChHHHHHHHHHHHHhhc
Q 017180 307 ADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQE-EYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 307 ~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~-e~pe~~~~~i~~fl~~~~ 372 (376)
.++ ++|+++++|++|..++.+..+.+.+..++.++++++++ |+... +.++++.+.|.+||++.+
T Consensus 157 ~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 222 (223)
T 2o2g_A 157 PHV--KAPTLLIVGGYDLPVIAMNEDALEQLQTSKRLVIIPRASHLFEEPGALTAVAQLASEWFMHYL 222 (223)
T ss_dssp GGC--CSCEEEEEETTCHHHHHHHHHHHHHCCSSEEEEEETTCCTTCCSTTHHHHHHHHHHHHHHHHC
T ss_pred hcC--CCCEEEEEccccCCCCHHHHHHHHhhCCCeEEEEeCCCCcccCChHHHHHHHHHHHHHHHHhc
Confidence 445 88999999999999987777777777788999999998 99766 567999999999999875
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-24 Score=186.11 Aligned_cols=258 Identities=9% Similarity=-0.009 Sum_probs=153.9
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCC-ccchHh-HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDV-STVEEW-RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVM 149 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~-~~~~~~-~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~ 149 (376)
.+|.+++|....+...+++|+|||+||++.. ++...| ..+...|.+ +|+|+++|+||+|.+.. ....++.
T Consensus 11 ~dg~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~-----~~~v~~~d~~~~~~~~~---~~~~~d~ 82 (275)
T 3h04_A 11 KDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTE-----HYDLIQLSYRLLPEVSL---DCIIEDV 82 (275)
T ss_dssp TTSCEEEEEEECCSSSSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTT-----TEEEEEECCCCTTTSCH---HHHHHHH
T ss_pred CCcEEEEEEEEccCCCCCCCEEEEEECCcccCCchhhhHHHHHHHHHh-----CceEEeeccccCCcccc---chhHHHH
Confidence 3577888877765433337889999997711 233333 367777777 69999999999997652 2345556
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhh
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (376)
.+.+..+.+.++ .++++|+||||||.+++.+|.+ ++++++|+++|......+.. .
T Consensus 83 ~~~~~~l~~~~~------~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~--------------~--- 137 (275)
T 3h04_A 83 YASFDAIQSQYS------NCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPF--------------K--- 137 (275)
T ss_dssp HHHHHHHHHTTT------TSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHH--------------H---
T ss_pred HHHHHHHHhhCC------CCCEEEEEecHHHHHHHHHhcc--CCccEEEecccccccccccc--------------c---
Confidence 666666666664 6789999999999999999998 78999999998531110000 0
Q ss_pred ccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcc
Q 017180 230 RAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADL 309 (376)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 309 (376)
............+ ................................ . .....+................+.++
T Consensus 138 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (275)
T 3h04_A 138 TTNSYYAKIAQSI--NETMIAQLTSPTPVVQDQIAQRFLIYVYARGT--G----KWINMINIADYTDSKYNIAPDELKTL 209 (275)
T ss_dssp SCCHHHHHHHTTS--CHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHH--T----CHHHHHCCSCTTSGGGSCCHHHHTTC
T ss_pred cccchhhcccccc--hHHHHhcccCCCCcCCCccccchhhhhhhhhc--C----chHHhhccccccccccccccchhccC
Confidence 0000000000000 01111100000000000000000000000000 0 00000100000000000022345677
Q ss_pred cCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCCh---HHHHHHHHHHHHhhcC
Q 017180 310 EGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYP---AMVAQELYQFLQQTFE 373 (376)
Q Consensus 310 ~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~p---e~~~~~i~~fl~~~~~ 373 (376)
+ |+|+++|++|.+++.+..+.+.+..++.++++++++ |.++.+.+ +++.+.+.+||++.+.
T Consensus 210 --~-P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 210 --P-PVFIAHCNGDYDVPVEESEHIMNHVPHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp --C-CEEEEEETTCSSSCTHHHHHHHTTCSSEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred --C-CEEEEecCCCCCCChHHHHHHHHhcCCceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 7 999999999999999999999999999999999998 99999988 6999999999998753
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-24 Score=179.62 Aligned_cols=186 Identities=12% Similarity=0.111 Sum_probs=137.7
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCC---CCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-C-CCCHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTI---SDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-M-DYNADV 148 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~---~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~-~~~~~~ 148 (376)
| ++.+....+...++.|+|||+||+ ++......|..++..|.+. ||+|+++|+||+|.|+.+. . ....++
T Consensus 16 g-~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~----g~~v~~~d~~g~g~s~~~~~~~~~~~~d 90 (208)
T 3trd_A 16 G-QLEVMITRPKGIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDEL----GLKTVRFNFRGVGKSQGRYDNGVGEVED 90 (208)
T ss_dssp S-EEEEEEECCSSCCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHT----TCEEEEECCTTSTTCCSCCCTTTHHHHH
T ss_pred c-eEEEEEEcCCCCCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHC----CCEEEEEecCCCCCCCCCccchHHHHHH
Confidence 5 677666655433237899999993 2225667788999999986 8999999999999998542 1 222333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
..+.+..+.+... .++++++|||+||.+++.++ .+| +++++|+++|..
T Consensus 91 ~~~~~~~l~~~~~------~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~------------------------ 138 (208)
T 3trd_A 91 LKAVLRWVEHHWS------QDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPV------------------------ 138 (208)
T ss_dssp HHHHHHHHHHHCT------TCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCT------------------------
T ss_pred HHHHHHHHHHhCC------CCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEecccc------------------------
Confidence 3333334444433 57899999999999999999 667 899999999831
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
... . ...+..
T Consensus 139 -----------~~~-----------~------------------------------------------------~~~~~~ 148 (208)
T 3trd_A 139 -----------FYE-----------G------------------------------------------------FASLTQ 148 (208)
T ss_dssp -----------TSG-----------G------------------------------------------------GTTCCS
T ss_pred -----------ccC-----------C------------------------------------------------chhhhh
Confidence 000 0 001222
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhcccCC-ceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKGAKGV-TKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
+ ++|+++++|++|..++.+..+.+.+..++ +++++++++ |+...+. +++.+.|.+||.
T Consensus 149 ~--~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~i~~fl~ 208 (208)
T 3trd_A 149 M--ASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASHFFHGRL-IELRELLVRNLA 208 (208)
T ss_dssp C--CSCEEEEEETTCSSSCHHHHHHHHHHSSSCCEEEEETTCCSSCTTCH-HHHHHHHHHHHC
T ss_pred c--CCCEEEEECCCCCCCCHHHHHHHHHHccCceEEEEeCCCCCcccccH-HHHHHHHHHHhC
Confidence 3 78999999999999999999999877665 999999998 9988775 789999999973
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-24 Score=183.93 Aligned_cols=208 Identities=14% Similarity=0.066 Sum_probs=148.5
Q ss_pred CceeEEE-EecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCC------
Q 017180 73 NSINIYY-EKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYN------ 145 (376)
Q Consensus 73 ~g~~l~y-~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~------ 145 (376)
+|+++.+ ...+ . +|+|||+||++ ++...|..++..|.+. ||+|+++|+||||.|..+.....
T Consensus 11 ~g~~~~~~~~~~--~---~~~vv~~hG~~--~~~~~~~~~~~~l~~~----G~~v~~~d~~g~g~s~~~~~~~~~~~~~~ 79 (238)
T 1ufo_A 11 AGLSVLARIPEA--P---KALLLALHGLQ--GSKEHILALLPGYAER----GFLLLAFDAPRHGEREGPPPSSKSPRYVE 79 (238)
T ss_dssp TTEEEEEEEESS--C---CEEEEEECCTT--CCHHHHHHTSTTTGGG----TEEEEECCCTTSTTSSCCCCCTTSTTHHH
T ss_pred CCEEEEEEecCC--C---ccEEEEECCCc--ccchHHHHHHHHHHhC----CCEEEEecCCCCccCCCCCCcccccchhh
Confidence 3667644 3444 2 78999999999 9999999999999886 89999999999999986544333
Q ss_pred -----HHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhh
Q 017180 146 -----ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMET 220 (376)
Q Consensus 146 -----~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~ 220 (376)
.+..++|+.++++.+... ...+++++|||+||.+++.+|.++|+.+.+++++++.........
T Consensus 80 ~~~~~~~~~~~d~~~~~~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~--------- 147 (238)
T 1ufo_A 80 EVYRVALGFKEEARRVAEEAERR---FGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQG--------- 147 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---HCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTT---------
T ss_pred hHHHHHHHHHHHHHHHHHHHHhc---cCCcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhhhh---------
Confidence 667778888777765211 137899999999999999999999999999999877431111000
Q ss_pred hhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHH
Q 017180 221 RYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 300 (376)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (376)
.. ..+++ .... .. .+
T Consensus 148 -------~~---------------------------------~~~~~-~~~~-~~-----------------~~------ 162 (238)
T 1ufo_A 148 -------QV---------------------------------VEDPG-VLAL-YQ-----------------AP------ 162 (238)
T ss_dssp -------CC---------------------------------CCCHH-HHHH-HH-----------------SC------
T ss_pred -------hc---------------------------------cCCcc-cchh-hc-----------------CC------
Confidence 00 00000 0000 00 00
Q ss_pred HHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC------CceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG------VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 301 ~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~------~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
....+.++. ++|+++++|++|..++.+..+.+.+..+ ++++++++++ |..+.+.++++.+.|.+||.+
T Consensus 163 -~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~~ 237 (238)
T 1ufo_A 163 -PATRGEAYG-GVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLEA 237 (238)
T ss_dssp -GGGCGGGGT-TCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHHC
T ss_pred -hhhhhhhcc-CCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHHHHHHHHHHHHHHHHhc
Confidence 111222322 6799999999999999998888877666 8899999998 999988888777777777653
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.93 E-value=7.8e-26 Score=192.87 Aligned_cols=219 Identities=13% Similarity=0.099 Sum_probs=132.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+++|||+||++ ++...|+.+++.|.+ +|+|+++|+||||.|+.+ ..+++.+.+.+++++++.. ..+
T Consensus 13 ~~~lv~lhg~g--~~~~~~~~~~~~L~~-----~~~vi~~Dl~GhG~S~~~----~~~~~~~~~~~~~~~l~~~---~~~ 78 (242)
T 2k2q_B 13 KTQLICFPFAG--GYSASFRPLHAFLQG-----ECEMLAAEPPGHGTNQTS----AIEDLEELTDLYKQELNLR---PDR 78 (242)
T ss_dssp CCEEESSCCCC--HHHHHHHHHHHHHCC-----SCCCEEEECCSSCCSCCC----TTTHHHHHHHHTTTTCCCC---CCS
T ss_pred CceEEEECCCC--CCHHHHHHHHHhCCC-----CeEEEEEeCCCCCCCCCC----CcCCHHHHHHHHHHHHHhh---cCC
Confidence 67899999999 999999999999987 799999999999999753 2356666677777776511 136
Q ss_pred cEEEEecchHHHHHHHHHHh------CCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhh
Q 017180 170 DLVIFGGGHAATLTVRAAKK------NLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLV 243 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~------~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (376)
+++|+||||||.+|+.+|.+ +|+. +++.+... ......... ...
T Consensus 79 ~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~---v~l~~~~~-~~~~~~~~~--~~~------------------------ 128 (242)
T 2k2q_B 79 PFVLFGHSMGGMITFRLAQKLEREGIFPQA---VIISAIQP-PHIQRKKVS--HLP------------------------ 128 (242)
T ss_dssp SCEEECCSSCCHHHHHHHHHHHHHHCSSCS---EEEEEEEC-SCCCSCCCS--SCT------------------------
T ss_pred CEEEEeCCHhHHHHHHHHHHHHHcCCCCCE---EEEECCCC-CCCCccccc--CCC------------------------
Confidence 89999999999999999986 4554 44432110 000000000 000
Q ss_pred ccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCC
Q 017180 244 SNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGS 323 (376)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D 323 (376)
....+.. +. ... ...++.... .... ..........+....... .. .+.++ ++|+++|+|++|
T Consensus 129 -~~~~~~~-~~-~~~----~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~-----~~-~l~~i--~~P~lvi~G~~D 190 (242)
T 2k2q_B 129 -DDQFLDH-II-QLG----GMPAELVEN--KEVM-SFFLPSFRSDYRALEQFE-----LY-DLAQI--QSPVHVFNGLDD 190 (242)
T ss_dssp -THHHHHT-TC-CTT----CCCCTTTHH--HHTT-TTCCSCHHHHHHHHTCCC-----CS-CCTTC--CCSEEEEEECSS
T ss_pred -HHHHHHH-HH-HhC----CCChHHhcC--HHHH-HHHHHHHHHHHHHHHhcc-----cC-CCCcc--CCCEEEEeeCCC
Confidence 0000000 00 000 000000000 0000 000000000000000000 00 14567 999999999999
Q ss_pred CCCCHHHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhh
Q 017180 324 PRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
..++ ...+.+.+..++.++++++++|++++|+|+++++.|.+||.+.
T Consensus 191 ~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 191 KKCI-RDAEGWKKWAKDITFHQFDGGHMFLLSQTEEVAERIFAILNQH 237 (242)
T ss_dssp CCHH-HHHHHHHTTCCCSEEEEEECCCSHHHHHCHHHHHHHHHHHHTT
T ss_pred CcCH-HHHHHHHHHhcCCeEEEEeCCceeEcCCHHHHHHHHHHHhhcc
Confidence 8865 4456666777788888898669999999999999999999864
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.6e-25 Score=177.46 Aligned_cols=169 Identities=11% Similarity=0.101 Sum_probs=136.4
Q ss_pred CCcEEEecCCCCCccchHh--HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEW--RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~--~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
+|+|||+||++ ++...| ..+...|.+. ||+|+++|+||+|.|+......+.++..+++.+.+++.. .
T Consensus 4 ~~~vv~~HG~~--~~~~~~~~~~~~~~l~~~----g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~-----~ 72 (176)
T 2qjw_A 4 RGHCILAHGFE--SGPDALKVTALAEVAERL----GWTHERPDFTDLDARRDLGQLGDVRGRLQRLLEIARAAT-----E 72 (176)
T ss_dssp SCEEEEECCTT--CCTTSHHHHHHHHHHHHT----TCEEECCCCHHHHTCGGGCTTCCHHHHHHHHHHHHHHHH-----T
T ss_pred CcEEEEEeCCC--CCccHHHHHHHHHHHHHC----CCEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC-----C
Confidence 67899999999 766644 4888999886 899999999999999855555677777787777777664 2
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEK 247 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (376)
.++++++||||||.+++.++.++| ++++|+++|.... + .
T Consensus 73 ~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~-------------------------~-------~------- 111 (176)
T 2qjw_A 73 KGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKM-------------------------G-------P------- 111 (176)
T ss_dssp TSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCB-------------------------T-------T-------
T ss_pred CCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCc-------------------------c-------c-------
Confidence 568999999999999999999988 9999999984200 0 0
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCC
Q 017180 248 AIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRS 327 (376)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~ 327 (376)
+. . +..+ ++|+++++|++|..++
T Consensus 112 ----------~~---~------------------------------------------~~~~--~~P~l~i~g~~D~~~~ 134 (176)
T 2qjw_A 112 ----------LP---A------------------------------------------LDAA--AVPISIVHAWHDELIP 134 (176)
T ss_dssp ----------BC---C------------------------------------------CCCC--SSCEEEEEETTCSSSC
T ss_pred ----------cC---c------------------------------------------cccc--CCCEEEEEcCCCCccC
Confidence 00 0 1233 7899999999999999
Q ss_pred HHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 328 KAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
.+..+.+.+.. +++++++ ++ |.. .+.++++.+.|.+||++
T Consensus 135 ~~~~~~~~~~~-~~~~~~~-~~~H~~-~~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 135 AADVIAWAQAR-SARLLLV-DDGHRL-GAHVQAASRAFAELLQS 175 (176)
T ss_dssp HHHHHHHHHHH-TCEEEEE-SSCTTC-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhC-CceEEEe-CCCccc-cccHHHHHHHHHHHHHh
Confidence 99988887666 7888888 67 997 48899999999999986
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.92 E-value=8e-25 Score=200.90 Aligned_cols=234 Identities=13% Similarity=0.153 Sum_probs=142.2
Q ss_pred CCcEEEecCCCCCccchHhHHHHH-HHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQ-DIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~-~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|+|||+||++ ++...|..... .+.+. ||+|+++|+||||.|..+...+.. ++.+|+.++++.+... .
T Consensus 159 ~p~vv~~HG~~--~~~~~~~~~~~~~~~~~----g~~vi~~D~~G~G~s~~~~~~~~~-~~~~d~~~~~~~l~~~----~ 227 (405)
T 3fnb_A 159 QDTLIVVGGGD--TSREDLFYMLGYSGWEH----DYNVLMVDLPGQGKNPNQGLHFEV-DARAAISAILDWYQAP----T 227 (405)
T ss_dssp CCEEEEECCSS--CCHHHHHHHTHHHHHHT----TCEEEEECCTTSTTGGGGTCCCCS-CTHHHHHHHHHHCCCS----S
T ss_pred CCEEEEECCCC--CCHHHHHHHHHHHHHhC----CcEEEEEcCCCCcCCCCCCCCCCc-cHHHHHHHHHHHHHhc----C
Confidence 48999999999 99888866552 34343 999999999999999744333333 4577888888888621 1
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHH
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKA 248 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (376)
.+++|+|||+||.+++.+|.++| +|+++|+++|.... .......+... .. .+..
T Consensus 228 ~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~---------------~~~~~~~~~~~------~~----~p~~ 281 (405)
T 3fnb_A 228 EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDV---------------AEVFRISFSTA------LK----APKT 281 (405)
T ss_dssp SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCH---------------HHHHHHHCC------------------
T ss_pred CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCH---------------HHHHHHhhhhh------hh----CcHH
Confidence 78999999999999999999999 89999999884210 00000000000 00 0000
Q ss_pred HHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCch---hHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCC
Q 017180 249 IQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYV---PAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPR 325 (376)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~ 325 (376)
+...+.. . ...................+.... ...+....... .+.++ ++|+|+|+|++|.+
T Consensus 282 ~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~l~~i--~~PvLii~G~~D~~ 346 (405)
T 3fnb_A 282 ILKWGSK-L---VTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIV---------DYNKI--DVPSLFLVGAGEDS 346 (405)
T ss_dssp --------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCC---------CGGGC--CSCEEEEEETTSCH
T ss_pred HHHHHHH-H---hhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhccc---------CHhhC--CCCEEEEecCCCcC
Confidence 0000000 0 001111111111110000010000 01111000000 15677 99999999999999
Q ss_pred CCHHHHHHHhccc----CCceEEEe---CCC-CCCCCCChHHHHHHHHHHHHhhcCCC
Q 017180 326 RSKAEMEALKGAK----GVTKFVEV---PGA-LLPQEEYPAMVAQELYQFLQQTFEPS 375 (376)
Q Consensus 326 ~~~~~~~~~~~~~----~~~~~~~~---~~~-H~~~~e~pe~~~~~i~~fl~~~~~~~ 375 (376)
++.+..+.+.+.. ++++++++ +++ |..+.++|+.+.+.|.+||++.++..
T Consensus 347 v~~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~~k 404 (405)
T 3fnb_A 347 ELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFKKK 404 (405)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC--
T ss_pred CChHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhCcC
Confidence 9988888776544 46779999 556 67788999999999999999987654
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=176.83 Aligned_cols=179 Identities=11% Similarity=0.124 Sum_probs=133.3
Q ss_pred CCcEEEecCCCCCcc---chHhHH-HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCC
Q 017180 90 SKNILMIPTISDVST---VEEWRL-VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~~~---~~~~~~-~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 165 (376)
+|+|||+||++ ++ ...|.. +...|.+. .||+|+++|+||++. .+..+++.+++++++
T Consensus 4 ~p~vv~lHG~~--~~~~~~~~~~~~~~~~l~~~---~g~~vi~~d~~g~~~----------~~~~~~~~~~~~~l~---- 64 (194)
T 2qs9_A 4 PSKAVIVPGNG--GGDVTTHGWYGWVKKELEKI---PGFQCLAKNMPDPIT----------ARESIWLPFMETELH---- 64 (194)
T ss_dssp CCEEEEECCSS--SSCTTTSTTHHHHHHHHTTS---TTCCEEECCCSSTTT----------CCHHHHHHHHHHTSC----
T ss_pred CCEEEEECCCC--CCCcccchHHHHHHHHHhhc---cCceEEEeeCCCCCc----------ccHHHHHHHHHHHhC----
Confidence 67899999999 77 456766 77777762 169999999999742 135677888888886
Q ss_pred CCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhcc
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSN 245 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (376)
..++++|+||||||.+++.+|.++| |+++|+++|..... . ..
T Consensus 65 -~~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~-~----------------------------------~~ 106 (194)
T 2qs9_A 65 -CDEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDL-G----------------------------------DE 106 (194)
T ss_dssp -CCTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCT-T----------------------------------CH
T ss_pred -cCCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCcccc-c----------------------------------hh
Confidence 1378999999999999999999999 99999999842100 0 00
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCC
Q 017180 246 EKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPR 325 (376)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~ 325 (376)
.. .....+..+ . . .+.+.++ .+|+++|+|++|.+
T Consensus 107 ~~-----~~~~~~~~~----------------------------------~-~----~~~~~~~--~~p~lii~G~~D~~ 140 (194)
T 2qs9_A 107 NE-----RASGYFTRP----------------------------------W-Q----WEKIKAN--CPYIVQFGSTDDPF 140 (194)
T ss_dssp HH-----HHTSTTSSC----------------------------------C-C----HHHHHHH--CSEEEEEEETTCSS
T ss_pred hh-----HHHhhhccc----------------------------------c-c----HHHHHhh--CCCEEEEEeCCCCc
Confidence 00 000111000 0 0 1123334 78999999999999
Q ss_pred CCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 326 RSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
+|.+..+.+.+.. ++++++++++ |+++.|+|+.+++.+ +||++...
T Consensus 141 vp~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~~-~fl~~~~~ 187 (194)
T 2qs9_A 141 LPWKEQQEVADRL-ETKLHKFTDCGHFQNTEFHELITVVK-SLLKVPAL 187 (194)
T ss_dssp SCHHHHHHHHHHH-TCEEEEESSCTTSCSSCCHHHHHHHH-HHHTCCCC
T ss_pred CCHHHHHHHHHhc-CCeEEEeCCCCCccchhCHHHHHHHH-HHHHhhhh
Confidence 9999999998777 8899999998 999999999887766 99987654
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.9e-25 Score=196.38 Aligned_cols=111 Identities=11% Similarity=0.157 Sum_probs=82.2
Q ss_pred eeEEEEecc-cCCCCCCCcEEEecCCCCCccc---hHhHHHHHHHHhhhCCcceEEEEeC----CCCCcCCCCCCCCCCH
Q 017180 75 INIYYEKHE-RESPDPSKNILMIPTISDVSTV---EEWRLVAQDIVQRVGKVNWRATIVD----WPGLGYSDRPKMDYNA 146 (376)
Q Consensus 75 ~~l~y~~~g-~~~~~~~~~vvllHG~~~~~~~---~~~~~~~~~L~~~~~~~~~~Vi~~D----~~G~G~S~~~~~~~~~ 146 (376)
..++|...| .+.. +++|||+||++ .+. ..|..+++.|.+ ||+|+++| +||||.|+.+ ...
T Consensus 24 ~~~~y~~~g~~~~~--~~~vvllHG~~--~~~~~~~~~~~l~~~L~~-----g~~Vi~~Dl~~D~~G~G~S~~~---~~~ 91 (335)
T 2q0x_A 24 PYCKIPVFMMNMDA--RRCVLWVGGQT--ESLLSFDYFTNLAEELQG-----DWAFVQVEVPSGKIGSGPQDHA---HDA 91 (335)
T ss_dssp TTEEEEEEEECTTS--SSEEEEECCTT--CCTTCSTTHHHHHHHHTT-----TCEEEEECCGGGBTTSCSCCHH---HHH
T ss_pred CceeEEEeccCCCC--CcEEEEECCCC--ccccchhHHHHHHHHHHC-----CcEEEEEeccCCCCCCCCcccc---CcH
Confidence 567888777 3322 57899999998 543 346788888855 89999995 5999998632 112
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH--hCCCCcceEEEeccC
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK--KNLVKPTAIAAVAPT 203 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~--~~p~~v~~lvl~~p~ 203 (376)
+++.+.+..+.+.++ .++++|+||||||.+|+.+|. .+|++|+++|+++|.
T Consensus 92 ~d~~~~~~~l~~~l~------~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~ 144 (335)
T 2q0x_A 92 EDVDDLIGILLRDHC------MNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVV 144 (335)
T ss_dssp HHHHHHHHHHHHHSC------CCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcC------CCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCc
Confidence 233333333333455 678999999999999999999 579999999999884
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.2e-25 Score=195.42 Aligned_cols=187 Identities=16% Similarity=0.179 Sum_probs=142.6
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhH-------HHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCC---
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWR-------LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMD--- 143 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~-------~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~--- 143 (376)
...+.|...+... +++|||+||++ .+...|. .++..|.++ ||.|+++|+||||+|+.....
T Consensus 49 ~~~~~~~~p~~~~---~~~vvl~HG~g--~~~~~~~~~pdg~~~~~~~l~~~----G~~V~~~D~~G~G~S~~~~~~~~~ 119 (328)
T 1qlw_A 49 QMYVRYQIPQRAK---RYPITLIHGCC--LTGMTWETTPDGRMGWDEYFLRK----GYSTYVIDQSGRGRSATDISAINA 119 (328)
T ss_dssp CEEEEEEEETTCC---SSCEEEECCTT--CCGGGGSSCTTSCCCHHHHHHHT----TCCEEEEECTTSTTSCCCCHHHHH
T ss_pred eEEEEEEccCCCC---CccEEEEeCCC--CCCCccccCCCCchHHHHHHHHC----CCeEEEECCCCcccCCCCCccccc
Confidence 4444444433322 67899999999 8888898 488888886 999999999999999854211
Q ss_pred ---------------------------CC----------------HHH------------------HHHHHHHHHhCCCC
Q 017180 144 ---------------------------YN----------------ADV------------------MEKFVVDLINAPDS 162 (376)
Q Consensus 144 ---------------------------~~----------------~~~------------------~~~~l~~~l~~l~~ 162 (376)
+. .++ +++++.++++.+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-- 197 (328)
T 1qlw_A 120 VKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL-- 197 (328)
T ss_dssp HHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH--
T ss_pred ccccccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh--
Confidence 00 333 677777777765
Q ss_pred CCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhh
Q 017180 163 PVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNML 242 (376)
Q Consensus 163 ~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (376)
.+++++||||||.+++.+|.++|++|+++|+++|... .
T Consensus 198 ------~~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~------------------------------------~ 235 (328)
T 1qlw_A 198 ------DGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC------------------------------------P 235 (328)
T ss_dssp ------TSEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC------------------------------------C
T ss_pred ------CCceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC------------------------------------C
Confidence 2799999999999999999999999999999997310 0
Q ss_pred hccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCC
Q 017180 243 VSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEG 322 (376)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~ 322 (376)
. .....+.+ ++|+|+++|++
T Consensus 236 -~---------------------------------------------------------~~~~~~~~--~~PvLii~G~~ 255 (328)
T 1qlw_A 236 -K---------------------------------------------------------PEDVKPLT--SIPVLVVFGDH 255 (328)
T ss_dssp -C---------------------------------------------------------GGGCGGGT--TSCEEEEECSS
T ss_pred -C---------------------------------------------------------HHHHhhcc--CCCEEEEeccC
Confidence 0 00001112 68999999999
Q ss_pred CCCCCH-----HHHHHHhcccC----CceEEEeC-----CC-CCCCCCC-hHHHHHHHHHHHHhhcC
Q 017180 323 SPRRSK-----AEMEALKGAKG----VTKFVEVP-----GA-LLPQEEY-PAMVAQELYQFLQQTFE 373 (376)
Q Consensus 323 D~~~~~-----~~~~~~~~~~~----~~~~~~~~-----~~-H~~~~e~-pe~~~~~i~~fl~~~~~ 373 (376)
|..++. +..+.+.+..+ ++++++++ |. |+++.|. ++++.+.|.+||++...
T Consensus 256 D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~~ 322 (328)
T 1qlw_A 256 IEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNTA 322 (328)
T ss_dssp CTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTCC
T ss_pred CccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhccc
Confidence 999995 77776665544 89999999 66 9998888 99999999999998754
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.7e-24 Score=189.99 Aligned_cols=234 Identities=11% Similarity=0.068 Sum_probs=149.7
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC---------
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM--------- 142 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~--------- 142 (376)
.+|.++++....+...++.|+||++||++ ++...|..+...+.. ||.|+++|+||+|.|+.+..
T Consensus 90 ~~g~~l~~~~~~P~~~~~~p~vv~~HG~g--~~~~~~~~~~~~~~~-----G~~v~~~D~rG~g~s~~~~~~~~~~~~~~ 162 (346)
T 3fcy_A 90 VRGARIHAKYIKPKTEGKHPALIRFHGYS--SNSGDWNDKLNYVAA-----GFTVVAMDVRGQGGQSQDVGGVTGNTLNG 162 (346)
T ss_dssp GGGCEEEEEEEEESCSSCEEEEEEECCTT--CCSCCSGGGHHHHTT-----TCEEEEECCTTSSSSCCCCCCCSSCCSBC
T ss_pred CCCCEEEEEEEecCCCCCcCEEEEECCCC--CCCCChhhhhHHHhC-----CcEEEEEcCCCCCCCCCCCcccCCCCcCc
Confidence 35777877766443333368999999999 888888888765554 99999999999999985432
Q ss_pred -----------CCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcc
Q 017180 143 -----------DYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIV 211 (376)
Q Consensus 143 -----------~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~ 211 (376)
.+......+|+.++++.+........++++++|||+||.+++.+|..+|+ |+++|+++|....
T Consensus 163 ~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~----- 236 (346)
T 3fcy_A 163 HIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSD----- 236 (346)
T ss_dssp SSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCC-----
T ss_pred ceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccC-----
Confidence 12233444555544443321111124689999999999999999999998 9999999884210
Q ss_pred cCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhc
Q 017180 212 FGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTG 291 (376)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (376)
............ ....+..++... . +..... ....... .
T Consensus 237 ---------~~~~~~~~~~~~------------~~~~~~~~~~~~-~--~~~~~~---~~~~~~~--------------~ 275 (346)
T 3fcy_A 237 ---------YKRVWDLDLAKN------------AYQEITDYFRLF-D--PRHERE---NEVFTKL--------------G 275 (346)
T ss_dssp ---------HHHHHHTTCCCG------------GGHHHHHHHHHH-C--TTCTTH---HHHHHHH--------------G
T ss_pred ---------HHHHhhcccccc------------chHHHHHHHHhc-C--CCcchH---HHHHHHh--------------C
Confidence 000000000000 001111111100 0 000000 0000000 0
Q ss_pred cCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC-CceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 292 LLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG-VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 292 ~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
..+ ....+.++ ++|+|+++|++|.+++.+..+.+.+..+ ++++++++++ |..+ +++.+.+.+||.
T Consensus 276 ~~d-------~~~~~~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~----~~~~~~i~~fl~ 342 (346)
T 3fcy_A 276 YID-------VKNLAKRI--KGDVLMCVGLMDQVCPPSTVFAAYNNIQSKKDIKVYPDYGHEPM----RGFGDLAMQFML 342 (346)
T ss_dssp GGC-------HHHHGGGC--CSEEEEEEETTCSSSCHHHHHHHHTTCCSSEEEEEETTCCSSCC----TTHHHHHHHHHH
T ss_pred ccc-------HHHHHHhc--CCCEEEEeeCCCCcCCHHHHHHHHHhcCCCcEEEEeCCCCCcCH----HHHHHHHHHHHH
Confidence 001 45567788 9999999999999999999988877665 7899999998 9987 568889999998
Q ss_pred hhc
Q 017180 370 QTF 372 (376)
Q Consensus 370 ~~~ 372 (376)
+..
T Consensus 343 ~l~ 345 (346)
T 3fcy_A 343 ELY 345 (346)
T ss_dssp TTC
T ss_pred Hhh
Confidence 763
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-23 Score=179.49 Aligned_cols=179 Identities=10% Similarity=0.099 Sum_probs=137.9
Q ss_pred CCcEEEecCCCCC---ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCC
Q 017180 90 SKNILMIPTISDV---STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSS 166 (376)
Q Consensus 90 ~~~vvllHG~~~~---~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 166 (376)
.|+|||+||+++. .....|..++..|.+. ||.|+++|+||+|.|+.+. ..+.+.+ +|+.++++.+.... .
T Consensus 47 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~----G~~v~~~d~~g~G~s~~~~-~~~~~~~-~d~~~~i~~l~~~~-~ 119 (249)
T 2i3d_A 47 APIAIILHPHPQFGGTMNNQIVYQLFYLFQKR----GFTTLRFNFRSIGRSQGEF-DHGAGEL-SDAASALDWVQSLH-P 119 (249)
T ss_dssp CCEEEEECCCGGGTCCTTSHHHHHHHHHHHHT----TCEEEEECCTTSTTCCSCC-CSSHHHH-HHHHHHHHHHHHHC-T
T ss_pred CCEEEEECCCcccCCCccchHHHHHHHHHHHC----CCEEEEECCCCCCCCCCCC-CCccchH-HHHHHHHHHHHHhC-C
Confidence 6789999998511 2234668889999886 8999999999999998543 2345554 77777666653111 1
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccH
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNE 246 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (376)
...+++++|||+||.+++.+|.++|+ ++++|+++|... .. .
T Consensus 120 ~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~-----------------------------------~~-~-- 160 (249)
T 2i3d_A 120 DSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPN-----------------------------------TY-D-- 160 (249)
T ss_dssp TCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTT-----------------------------------TS-C--
T ss_pred CCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchh-----------------------------------hh-h--
Confidence 23579999999999999999999998 999999998320 00 0
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCC
Q 017180 247 KAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRR 326 (376)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~ 326 (376)
. ..+.++ ++|+++++|++|.++
T Consensus 161 -----------~---------------------------------------------~~~~~~--~~P~lii~G~~D~~~ 182 (249)
T 2i3d_A 161 -----------F---------------------------------------------SFLAPC--PSSGLIINGDADKVA 182 (249)
T ss_dssp -----------C---------------------------------------------TTCTTC--CSCEEEEEETTCSSS
T ss_pred -----------h---------------------------------------------hhhccc--CCCEEEEEcCCCCCC
Confidence 0 012344 889999999999999
Q ss_pred CHHHHHHHhcccC-----CceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 327 SKAEMEALKGAKG-----VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 327 ~~~~~~~~~~~~~-----~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
+.+..+.+.+..+ ++++++++++ |+.. +.++++.+.|.+||.+.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~i~~fl~~~l~ 234 (249)
T 2i3d_A 183 PEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDELMGECEDYLDRRLN 234 (249)
T ss_dssp CHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhhccCCceeEEEECCCCcccc-cCHHHHHHHHHHHHHHhcC
Confidence 9998888876665 7899999998 9988 7999999999999998753
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.3e-25 Score=188.48 Aligned_cols=188 Identities=13% Similarity=0.158 Sum_probs=139.8
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFV 153 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l 153 (376)
|..++|...+...+ +|+|||+||++ ++...|..++..|.+. ||.|+++|+||+|.+... ..+++.+.+
T Consensus 40 ~~~l~~p~~~~~~~--~p~vv~~HG~~--~~~~~~~~~~~~l~~~----G~~v~~~d~~g~g~~~~~----~~~d~~~~~ 107 (262)
T 1jfr_A 40 GGTIYYPTSTADGT--FGAVVISPGFT--AYQSSIAWLGPRLASQ----GFVVFTIDTNTTLDQPDS----RGRQLLSAL 107 (262)
T ss_dssp CEEEEEESCCTTCC--EEEEEEECCTT--CCGGGTTTHHHHHHTT----TCEEEEECCSSTTCCHHH----HHHHHHHHH
T ss_pred ceeEEecCCCCCCC--CCEEEEeCCcC--CCchhHHHHHHHHHhC----CCEEEEeCCCCCCCCCch----hHHHHHHHH
Confidence 66777776532221 67899999999 9999999999999886 999999999999976421 112222222
Q ss_pred HHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCc
Q 017180 154 VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPG 233 (376)
Q Consensus 154 ~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (376)
..+.+..........++++++||||||.+++.+|.++|+ ++++|+++|..
T Consensus 108 ~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~----------------------------- 157 (262)
T 1jfr_A 108 DYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWN----------------------------- 157 (262)
T ss_dssp HHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCC-----------------------------
T ss_pred HHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccC-----------------------------
Confidence 333221000000125689999999999999999999997 99999998721
Q ss_pred hhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCC
Q 017180 234 VGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKL 313 (376)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 313 (376)
. . ..+.++ ++
T Consensus 158 -----------~------------~---------------------------------------------~~~~~~--~~ 167 (262)
T 1jfr_A 158 -----------T------------D---------------------------------------------KTWPEL--RT 167 (262)
T ss_dssp -----------S------------C---------------------------------------------CCCTTC--CS
T ss_pred -----------c------------c---------------------------------------------cccccc--CC
Confidence 0 0 012334 78
Q ss_pred cEEEEEeCCCCCCCHHH-HHHHhcccC---CceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 314 PLLVVSTEGSPRRSKAE-MEALKGAKG---VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 314 Pvlii~G~~D~~~~~~~-~~~~~~~~~---~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
|+|+++|++|.+++.+. .+.+.+..+ +.++++++++ |+.+.+.++++.+.|.+||++.+.
T Consensus 168 P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~l~ 232 (262)
T 1jfr_A 168 PTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRFID 232 (262)
T ss_dssp CEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHS
T ss_pred CEEEEecCccccCCchhhHHHHHHHhhcCCCceEEEeCCCCcCCcccchHHHHHHHHHHHHHHhc
Confidence 99999999999999887 777765544 4589999998 999999999999999999998764
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-24 Score=175.06 Aligned_cols=169 Identities=12% Similarity=0.119 Sum_probs=137.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcce---EEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNW---RATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSS 166 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~---~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 166 (376)
+|+|||+||++ ++...|..++..|.+. || +|+++|+||+|.|.. .+.+++++++.+++++++
T Consensus 3 ~~~vv~~HG~~--~~~~~~~~~~~~l~~~----G~~~~~v~~~d~~g~g~s~~----~~~~~~~~~~~~~~~~~~----- 67 (181)
T 1isp_A 3 HNPVVMVHGIG--GASFNFAGIKSYLVSQ----GWSRDKLYAVDFWDKTGTNY----NNGPVLSRFVQKVLDETG----- 67 (181)
T ss_dssp CCCEEEECCTT--CCGGGGHHHHHHHHHT----TCCGGGEEECCCSCTTCCHH----HHHHHHHHHHHHHHHHHC-----
T ss_pred CCeEEEECCcC--CCHhHHHHHHHHHHHc----CCCCccEEEEecCCCCCchh----hhHHHHHHHHHHHHHHcC-----
Confidence 67899999999 9999999999999986 77 799999999998863 467888999999999886
Q ss_pred CCCcEEEEecchHHHHHHHHHHhC--CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhc
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKN--LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVS 244 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~--p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (376)
.++++++||||||.+++.++.++ |++++++|+++|... .. .
T Consensus 68 -~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~-----------------------------------~~-~ 110 (181)
T 1isp_A 68 -AKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANR-----------------------------------LT-T 110 (181)
T ss_dssp -CSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGG-----------------------------------GT-C
T ss_pred -CCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccc-----------------------------------cc-c
Confidence 67899999999999999999988 899999999998310 00 0
Q ss_pred cHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCC
Q 017180 245 NEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSP 324 (376)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~ 324 (376)
. .... +. . ... ++|+++|+|++|.
T Consensus 111 ~----------~~~~--------------------~~------------~------------~~~--~~p~l~i~G~~D~ 134 (181)
T 1isp_A 111 G----------KALP--------------------GT------------D------------PNQ--KILYTSIYSSADM 134 (181)
T ss_dssp S----------BCCC--------------------CS------------C------------TTC--CCEEEEEEETTCS
T ss_pred c----------ccCC--------------------CC------------C------------Ccc--CCcEEEEecCCCc
Confidence 0 0000 00 0 011 6799999999999
Q ss_pred CCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 325 RRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
+++.+.. ..+++++++++++ |+.+.++| ++.+.|.+||.+..
T Consensus 135 ~v~~~~~-----~~~~~~~~~~~~~gH~~~~~~~-~~~~~i~~fl~~~~ 177 (181)
T 1isp_A 135 IVMNYLS-----RLDGARNVQIHGVGHIGLLYSS-QVNSLIKEGLNGGG 177 (181)
T ss_dssp SSCHHHH-----CCBTSEEEEESSCCTGGGGGCH-HHHHHHHHHHTTTC
T ss_pred ccccccc-----cCCCCcceeeccCchHhhccCH-HHHHHHHHHHhccC
Confidence 9998743 3678899999998 99999987 69999999998753
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-23 Score=176.06 Aligned_cols=196 Identities=12% Similarity=0.010 Sum_probs=149.6
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-----------
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK----------- 141 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~----------- 141 (376)
+|.++.+....+.+ ++.|+||++||++ ++...|..++..|++. ||.|+++|+||+|.|....
T Consensus 12 ~g~~l~~~~~~p~~-~~~p~vv~~hG~~--~~~~~~~~~~~~l~~~----g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~ 84 (236)
T 1zi8_A 12 DGHTFGALVGSPAK-APAPVIVIAQDIF--GVNAFMRETVSWLVDQ----GYAAVCPDLYARQAPGTALDPQDERQREQA 84 (236)
T ss_dssp TSCEECEEEECCSS-CSEEEEEEECCTT--BSCHHHHHHHHHHHHT----TCEEEEECGGGGTSTTCBCCTTCHHHHHHH
T ss_pred CCCeEEEEEECCCC-CCCCEEEEEcCCC--CCCHHHHHHHHHHHhC----CcEEEeccccccCCCcccccccchhhhhhh
Confidence 35566555554432 1257899999999 8888999999999987 9999999999999886321
Q ss_pred ----CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCc
Q 017180 142 ----MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSS 217 (376)
Q Consensus 142 ----~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~ 217 (376)
...+.+...+|+.++++.+..... ...+++++|||+||.+++.+|.++| +++++++.|..
T Consensus 85 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~------------- 148 (236)
T 1zi8_A 85 YKLWQAFDMEAGVGDLEAAIRYARHQPY-SNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVG------------- 148 (236)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHTSSTT-EEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSS-------------
T ss_pred hhhhhccCcchhhHHHHHHHHHHHhccC-CCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcc-------------
Confidence 234667778888888887753221 0368999999999999999999988 88999887621
Q ss_pred hhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCC
Q 017180 218 METRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVN 297 (376)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (376)
. . .
T Consensus 149 ------------------------~---~---------~----------------------------------------- 151 (236)
T 1zi8_A 149 ------------------------L---E---------K----------------------------------------- 151 (236)
T ss_dssp ------------------------G---G---------G-----------------------------------------
T ss_pred ------------------------c---c---------c-----------------------------------------
Confidence 0 0 0
Q ss_pred cHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc---CCceEEEeCCC-CCCCCCCh--------HHHHHHHH
Q 017180 298 SREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK---GVTKFVEVPGA-LLPQEEYP--------AMVAQELY 365 (376)
Q Consensus 298 ~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~-H~~~~e~p--------e~~~~~i~ 365 (376)
....+.++ ++|+++++|++|.+++.+..+.+.+.. +++++++++++ |....+.+ +++.+.+.
T Consensus 152 ----~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~ 225 (236)
T 1zi8_A 152 ----QLNKVPEV--KHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASAAALANERTL 225 (236)
T ss_dssp ----CGGGGGGC--CSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHH
T ss_pred ----chhhhhhc--CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEECCCCcccccCCCCccCHHHHHHHHHHHH
Confidence 01134455 889999999999999998888886554 58899999998 98776654 57889999
Q ss_pred HHHHhhcCC
Q 017180 366 QFLQQTFEP 374 (376)
Q Consensus 366 ~fl~~~~~~ 374 (376)
+||++.+..
T Consensus 226 ~fl~~~l~~ 234 (236)
T 1zi8_A 226 DFLVPLQSR 234 (236)
T ss_dssp HHHGGGCC-
T ss_pred HHHHHhcCC
Confidence 999988754
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.3e-25 Score=189.46 Aligned_cols=99 Identities=8% Similarity=0.097 Sum_probs=87.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+++|||+||++ ++...|..++. |.+ +|+|+++|+||+|.++.+ .++++++++++.++++.+. ..+
T Consensus 21 ~~~lv~lhg~~--~~~~~~~~~~~-l~~-----~~~v~~~d~~G~~~~~~~--~~~~~~~~~~~~~~i~~~~-----~~~ 85 (265)
T 3ils_A 21 RKTLFMLPDGG--GSAFSYASLPR-LKS-----DTAVVGLNCPYARDPENM--NCTHGAMIESFCNEIRRRQ-----PRG 85 (265)
T ss_dssp SEEEEEECCTT--CCGGGGTTSCC-CSS-----SEEEEEEECTTTTCGGGC--CCCHHHHHHHHHHHHHHHC-----SSC
T ss_pred CCEEEEECCCC--CCHHHHHHHHh-cCC-----CCEEEEEECCCCCCCCCC--CCCHHHHHHHHHHHHHHhC-----CCC
Confidence 67899999999 99999999988 866 899999999999877643 4789999999999998874 246
Q ss_pred cEEEEecchHHHHHHHHHH---hCCCCcceEEEeccC
Q 017180 170 DLVIFGGGHAATLTVRAAK---KNLVKPTAIAAVAPT 203 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~---~~p~~v~~lvl~~p~ 203 (376)
+++|+||||||.+|+.+|. ++|++++++|++++.
T Consensus 86 ~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~ 122 (265)
T 3ils_A 86 PYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAP 122 (265)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred CEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCC
Confidence 8999999999999999998 778889999999864
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.91 E-value=3.5e-23 Score=188.87 Aligned_cols=227 Identities=12% Similarity=0.112 Sum_probs=154.4
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEK 151 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~ 151 (376)
+|.+|.+....+...++.|+||++||++ ++...|......|.++ ||.|+++|+||+|.|. ......+.++.+.
T Consensus 135 dg~~i~~~l~~p~~~~~~P~vl~~hG~~--~~~~~~~~~~~~l~~~----G~~v~~~d~rG~G~s~~~~~~~~~~~~~~~ 208 (386)
T 2jbw_A 135 DGIPMPVYVRIPEGPGPHPAVIMLGGLE--STKEESFQMENLVLDR----GMATATFDGPGQGEMFEYKRIAGDYEKYTS 208 (386)
T ss_dssp TTEEEEEEEECCSSSCCEEEEEEECCSS--CCTTTTHHHHHHHHHT----TCEEEEECCTTSGGGTTTCCSCSCHHHHHH
T ss_pred CCEEEEEEEEcCCCCCCCCEEEEeCCCC--ccHHHHHHHHHHHHhC----CCEEEEECCCCCCCCCCCCCCCccHHHHHH
Confidence 4777776665443222367899999999 8777666667788776 9999999999999994 4445677778888
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
++.+++.+.. ....++++|+|||+||.+++.+|.+ |++++++|++ |... +.... .
T Consensus 209 ~~~~~l~~~~---~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~--~~~~~------~------------ 263 (386)
T 2jbw_A 209 AVVDLLTKLE---AIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFS--DLDYW------D------------ 263 (386)
T ss_dssp HHHHHHHHCT---TEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCS--CSTTG------G------------
T ss_pred HHHHHHHhCC---CcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCC--hHHHH------H------------
Confidence 8888887742 0125789999999999999999999 8899999999 7421 11000 0
Q ss_pred CchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccC
Q 017180 232 PGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEG 311 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 311 (376)
.. +..+..... ..+.. ....+... .. +... . ....+.++
T Consensus 264 -~~-----------~~~~~~~~~-~~~g~--~~~~~~~~---~~-------------~~~~-~-------~~~~~~~i-- 302 (386)
T 2jbw_A 264 -LE-----------TPLTKESWK-YVSKV--DTLEEARL---HV-------------HAAL-E-------TRDVLSQI-- 302 (386)
T ss_dssp -GS-----------CHHHHHHHH-HHTTC--SSHHHHHH---HH-------------HHHT-C-------CTTTGGGC--
T ss_pred -hc-----------cHHHHHHHH-HHhCC--CCHHHHHH---HH-------------HHhC-C-------hhhhhccc--
Confidence 00 000000000 00100 00011100 00 0000 0 11235667
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhccc-C-CceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAK-G-VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~-~-~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
++|+|+++|++|. ++.+..+.+.+.. + ++++++++++ |+. .++++++.+.|.+||.+.++
T Consensus 303 ~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~l~ 365 (386)
T 2jbw_A 303 ACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMADWLYDVLV 365 (386)
T ss_dssp CSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCC-CCHHHHHHHHHHhcCCCcEEEEeCCCCcCC-ccchHHHHHHHHHHHHHhcC
Confidence 8999999999999 8999999888776 6 8999999998 975 67888999999999998765
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=171.70 Aligned_cols=178 Identities=11% Similarity=0.080 Sum_probs=133.5
Q ss_pred CCcEEEecCCCCCccch-HhHHHHH-HHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVE-EWRLVAQ-DIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~-~~~~~~~-~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
.|+|||+||++ ++.. .|...+. .|.+. ||+|+++|+| .|+.+ +.+++++++.++++.+
T Consensus 4 ~p~vv~~HG~~--~~~~~~~~~~~~~~l~~~----g~~v~~~d~~---~~~~~----~~~~~~~~~~~~~~~~------- 63 (192)
T 1uxo_A 4 TKQVYIIHGYR--ASSTNHWFPWLKKRLLAD----GVQADILNMP---NPLQP----RLEDWLDTLSLYQHTL------- 63 (192)
T ss_dssp CCEEEEECCTT--CCTTSTTHHHHHHHHHHT----TCEEEEECCS---CTTSC----CHHHHHHHHHTTGGGC-------
T ss_pred CCEEEEEcCCC--CCcchhHHHHHHHHHHhC----CcEEEEecCC---CCCCC----CHHHHHHHHHHHHHhc-------
Confidence 34599999999 8888 7888775 58655 9999999999 33333 6888999999888876
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCC--CcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhcc
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLV--KPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSN 245 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (376)
.++++++||||||.+++.+|.++|+ +++++|+++|..... . ..
T Consensus 64 ~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~-~-------------------------------~~--- 108 (192)
T 1uxo_A 64 HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSL-P-------------------------------TL--- 108 (192)
T ss_dssp CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCC-T-------------------------------TC---
T ss_pred cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCcc-c-------------------------------cc---
Confidence 3679999999999999999999999 999999999842100 0 00
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCC
Q 017180 246 EKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPR 325 (376)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~ 325 (376)
+. + ..+...+ . + . ..+.++ ++|+++|+|++|.+
T Consensus 109 ~~-----~-~~~~~~~---------------------------------~--~---~-~~~~~~--~~P~l~i~g~~D~~ 141 (192)
T 1uxo_A 109 QM-----L-DEFTQGS---------------------------------F--D---H-QKIIES--AKHRAVIASKDDQI 141 (192)
T ss_dssp GG-----G-GGGTCSC---------------------------------C--C---H-HHHHHH--EEEEEEEEETTCSS
T ss_pred hh-----h-hhhhhcC---------------------------------C--C---H-HHHHhh--cCCEEEEecCCCCc
Confidence 00 0 0000000 0 0 1 234555 78999999999999
Q ss_pred CCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHH---HHHHHHHHHh
Q 017180 326 RSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMV---AQELYQFLQQ 370 (376)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~---~~~i~~fl~~ 370 (376)
++.+..+.+.+.. ++++++++++ |+.+.++|+++ .+.|.+|+++
T Consensus 142 ~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 142 VPFSFSKDLAQQI-DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 189 (192)
T ss_dssp SCHHHHHHHHHHT-TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhc-CceEEEeCCCcCcccccccccHHHHHHHHHHHHHH
Confidence 9999999998877 8999999998 99998887554 5566666654
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-22 Score=168.52 Aligned_cols=177 Identities=11% Similarity=0.081 Sum_probs=135.8
Q ss_pred CCcEEEecCCC---CCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCC
Q 017180 90 SKNILMIPTIS---DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSS 166 (376)
Q Consensus 90 ~~~vvllHG~~---~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 166 (376)
.|+|||+||++ +......|..++..|.++ ||+|+++|+||+|.|+.+.. ..+...+|+.++++.+....
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~----g~~v~~~d~~g~g~s~~~~~--~~~~~~~d~~~~~~~l~~~~-- 108 (220)
T 2fuk_A 37 PVTAIVCHPLSTEGGSMHNKVVTMAARALREL----GITVVRFNFRSVGTSAGSFD--HGDGEQDDLRAVAEWVRAQR-- 108 (220)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTT----TCEEEEECCTTSTTCCSCCC--TTTHHHHHHHHHHHHHHHHC--
T ss_pred cCEEEEECCCCCcCCcccchHHHHHHHHHHHC----CCeEEEEecCCCCCCCCCcc--cCchhHHHHHHHHHHHHhcC--
Confidence 67899999953 224456688899999886 99999999999999985432 22455666666665553111
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccH
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNE 246 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (376)
..++++++|||+||.+++.++.++ +++++|+++|.... . .
T Consensus 109 ~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~-------------------------------------~-~ 148 (220)
T 2fuk_A 109 PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGR-------------------------------------W-D 148 (220)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTT-------------------------------------B-C
T ss_pred CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccc-------------------------------------h-h
Confidence 246899999999999999999987 89999999984200 0 0
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCC
Q 017180 247 KAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRR 326 (376)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~ 326 (376)
+. .+. . .+|+++++|++|..+
T Consensus 149 -----------~~---------------------------------------------~~~-~--~~p~l~i~g~~D~~~ 169 (220)
T 2fuk_A 149 -----------FS---------------------------------------------DVQ-P--PAQWLVIQGDADEIV 169 (220)
T ss_dssp -----------CT---------------------------------------------TCC-C--CSSEEEEEETTCSSS
T ss_pred -----------hh---------------------------------------------hcc-c--CCcEEEEECCCCccc
Confidence 00 000 1 569999999999999
Q ss_pred CHHHHHHHhccc-CCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcCC
Q 017180 327 SKAEMEALKGAK-GVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFEP 374 (376)
Q Consensus 327 ~~~~~~~~~~~~-~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~~ 374 (376)
+.+..+.+.+.. +++++++++++ |.... +++++.+.+.+||.+.+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~i~~~l~~~l~~ 218 (220)
T 2fuk_A 170 DPQAVYDWLETLEQQPTLVRMPDTSHFFHR-KLIDLRGALQHGVRRWLPA 218 (220)
T ss_dssp CHHHHHHHHTTCSSCCEEEEETTCCTTCTT-CHHHHHHHHHHHHGGGCSS
T ss_pred CHHHHHHHHHHhCcCCcEEEeCCCCceehh-hHHHHHHHHHHHHHHHhhc
Confidence 999999988776 78999999998 99877 4889999999999987653
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.3e-22 Score=180.21 Aligned_cols=263 Identities=11% Similarity=0.051 Sum_probs=151.3
Q ss_pred CceeEEEEecccCC--CCCCCcEEEecCCCCCccchHhHH-HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC-CCCHHH
Q 017180 73 NSINIYYEKHERES--PDPSKNILMIPTISDVSTVEEWRL-VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM-DYNADV 148 (376)
Q Consensus 73 ~g~~l~y~~~g~~~--~~~~~~vvllHG~~~~~~~~~~~~-~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~-~~~~~~ 148 (376)
+|.++.+...-+.. .++.|+||++||++ ++...|.. ++..|.++ ||.|+++|+||+|.|+.... ..+.+.
T Consensus 77 ~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~--~~~~~~~~~~~~~l~~~----G~~v~~~d~~g~g~s~~~~~~~~~~~~ 150 (367)
T 2hdw_A 77 YGITLAADLYLPKNRGGDRLPAIVIGGPFG--AVKEQSSGLYAQTMAER----GFVTLAFDPSYTGESGGQPRNVASPDI 150 (367)
T ss_dssp TSCEEEEEEEEESSCCSSCEEEEEEECCTT--CCTTSHHHHHHHHHHHT----TCEEEEECCTTSTTSCCSSSSCCCHHH
T ss_pred CCCEEEEEEEeCCCCCCCCCCEEEEECCCC--CcchhhHHHHHHHHHHC----CCEEEEECCCCcCCCCCcCccccchhh
Confidence 46667665442221 12257899999999 88888875 78888886 89999999999999984333 333566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
..+|+.++++.+........++++++|||+||.+++.+|.++| +++++|+++|... .......
T Consensus 151 ~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~----------------~~~~~~~ 213 (367)
T 2hdw_A 151 NTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDM----------------TRVMSKG 213 (367)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCH----------------HHHHHHT
T ss_pred HHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccc----------------cHHHhhh
Confidence 6777766666553111112468999999999999999999998 6999999987310 0000000
Q ss_pred hccCchhhHHhhhhhc-cHHHHHHHHHhcccC---CCC--CCChHHHHHHHHHHhccCC-C------------chhHHHh
Q 017180 229 LRAPGVGWMMYNMLVS-NEKAIQSQYKSHVYS---NPD--NVTPGIVESRYALTKRKGA-R------------YVPAAFL 289 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~-~------------~~~~~~~ 289 (376)
.............+.. ............... .+. ................... . .....+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (367)
T 2hdw_A 214 YNDSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFM 293 (367)
T ss_dssp TTTCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHT
T ss_pred hccccchHHHHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhc
Confidence 0000000000000000 011111111111100 000 1111222222222211100 0 0000000
Q ss_pred hccCCCCCcHHHHHHHHhcccCC-CcEEEEEeCCCCCCCHHHHHHHhc-ccCCceEEEeCCC-CCCCCCChHH-HHHHHH
Q 017180 290 TGLLDPVNSREEFLQLFADLEGK-LPLLVVSTEGSPRRSKAEMEALKG-AKGVTKFVEVPGA-LLPQEEYPAM-VAQELY 365 (376)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~i~~~-~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~-H~~~~e~pe~-~~~~i~ 365 (376)
. .+ ....+.++ + +|+|+++|++|. +.+..+.+.+ ..+++++++++++ |+.+.+.|+. +.+.|.
T Consensus 294 -~-~~-------~~~~~~~i--~~~PvLii~G~~D~--~~~~~~~~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~ 360 (367)
T 2hdw_A 294 -N-MP-------ILTYIKEI--SPRPILLIHGERAH--SRYFSETAYAAAAEPKELLIVPGASHVDLYDRLDRIPFDRIA 360 (367)
T ss_dssp -T-SC-------SCTTGGGG--TTSCEEEEEETTCT--THHHHHHHHHHSCSSEEEEEETTCCTTHHHHCTTTSCHHHHH
T ss_pred -C-CC-------hhHhHHhh--cCCceEEEecCCCC--CHHHHHHHHHhCCCCeeEEEeCCCCeeeeecCchhHHHHHHH
Confidence 0 00 12245667 7 999999999998 7777777755 5678999999998 9987777765 589999
Q ss_pred HHHHhh
Q 017180 366 QFLQQT 371 (376)
Q Consensus 366 ~fl~~~ 371 (376)
+||++.
T Consensus 361 ~fl~~~ 366 (367)
T 2hdw_A 361 GFFDEH 366 (367)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999875
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-23 Score=171.65 Aligned_cols=177 Identities=12% Similarity=0.129 Sum_probs=136.6
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccc-hHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTV-EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~-~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
|.+++|...|+ +++|||+||++ ++. ..|...+..+.. .++.+|+||++ .++.++++++
T Consensus 6 g~~l~~~~~g~-----~~~vv~~HG~~--~~~~~~~~~~~~~~~~-------~~~~v~~~~~~-------~~~~~~~~~~ 64 (191)
T 3bdv_A 6 EIDLRLTEVSQ-----QLTMVLVPGLR--DSDDEHWQSHWERRFP-------HWQRIRQREWY-------QADLDRWVLA 64 (191)
T ss_dssp HHHHHHHHHHT-----TCEEEEECCTT--CCCTTSHHHHHHHHCT-------TSEECCCSCCS-------SCCHHHHHHH
T ss_pred cCccccCCCCC-----CceEEEECCCC--CCchhhHHHHHHHhcC-------CeEEEeccCCC-------CcCHHHHHHH
Confidence 44555655554 78999999999 776 677666554333 23567888875 3578999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
+.++++++ .++++++||||||.+++.+|.++|++++++|+++|....
T Consensus 65 ~~~~~~~~-------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~-------------------------- 111 (191)
T 3bdv_A 65 IRRELSVC-------TQPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPM-------------------------- 111 (191)
T ss_dssp HHHHHHTC-------SSCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGG--------------------------
T ss_pred HHHHHHhc-------CCCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccc--------------------------
Confidence 99999987 378999999999999999999999999999999984200
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCC
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGK 312 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 312 (376)
... +. +. ..+.++ +
T Consensus 112 ------~~~----------------~~------~~------------------------------------~~~~~~--~ 125 (191)
T 3bdv_A 112 ------RFE----------------ID------DR------------------------------------IQASPL--S 125 (191)
T ss_dssp ------GGT----------------CT------TT------------------------------------SCSSCC--S
T ss_pred ------ccc----------------Cc------cc------------------------------------cccccC--C
Confidence 000 00 00 023445 8
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCC----CChHHHHHHHHHHHHhhc
Q 017180 313 LPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQE----EYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 313 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~----e~pe~~~~~i~~fl~~~~ 372 (376)
+|+++++|++|.+++.+..+.+.+.. ++++++++++ |+++. +.|+.+ +.|.+||++..
T Consensus 126 ~P~lii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~-~~i~~fl~~~~ 188 (191)
T 3bdv_A 126 VPTLTFASHNDPLMSFTRAQYWAQAW-DSELVDVGEAGHINAEAGFGPWEYGL-KRLAEFSEILI 188 (191)
T ss_dssp SCEEEEECSSBTTBCHHHHHHHHHHH-TCEEEECCSCTTSSGGGTCSSCHHHH-HHHHHHHHTTC
T ss_pred CCEEEEecCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCcccccccchhHHHHH-HHHHHHHHHhc
Confidence 99999999999999999988887766 8999999998 99887 567655 99999999874
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-23 Score=182.96 Aligned_cols=208 Identities=13% Similarity=0.154 Sum_probs=139.5
Q ss_pred CCcEEEecCCCCCccc--hHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHH-HHhCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTV--EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVD-LINAPDSPVSS 166 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~--~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~-~l~~l~~~~~~ 166 (376)
+++|||+||++ ++. ..|..++..|.. +|+|+++|+||||.|+.+ .++++++++++.+ +++.++
T Consensus 67 ~~~lvllhG~~--~~~~~~~~~~~~~~l~~-----~~~v~~~d~~G~G~s~~~--~~~~~~~a~~~~~~l~~~~~----- 132 (300)
T 1kez_A 67 EVTVICCAGTA--AISGPHEFTRLAGALRG-----IAPVRAVPQPGYEEGEPL--PSSMAAVAAVQADAVIRTQG----- 132 (300)
T ss_dssp SSEEEECCCSS--TTCSTTTTHHHHHHTSS-----SCCBCCCCCTTSSTTCCB--CSSHHHHHHHHHHHHHHHCS-----
T ss_pred CCeEEEECCCc--ccCcHHHHHHHHHhcCC-----CceEEEecCCCCCCCCCC--CCCHHHHHHHHHHHHHHhcC-----
Confidence 78999999999 866 899999999887 799999999999998754 4789999999884 566665
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCC---CCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhh
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNL---VKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLV 243 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p---~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (376)
.++++|+||||||.+++.+|.++| ++|+++|++++..... . .....+
T Consensus 133 -~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~--------~--~~~~~~------------------- 182 (300)
T 1kez_A 133 -DKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGH--------Q--DAMNAW------------------- 182 (300)
T ss_dssp -SCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTT--------C--HHHHHH-------------------
T ss_pred -CCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcc--------h--hHHHHH-------------------
Confidence 678999999999999999999988 5899999998742100 0 000000
Q ss_pred ccHHHHHHHHHhcccCCCC-CCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCC
Q 017180 244 SNEKAIQSQYKSHVYSNPD-NVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEG 322 (376)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~ 322 (376)
.. .+....+.... ...+...... ..+...... + ....+ ++|+++|+|++
T Consensus 183 -----~~-~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~-------~--~~~~i--~~P~lii~G~d 232 (300)
T 1kez_A 183 -----LE-ELTATLFDRETVRMDDTRLTAL-------------GAYDRLTGQ-------W--RPRET--GLPTLLVSAGE 232 (300)
T ss_dssp -----HH-HHHGGGCCCCSSCCCHHHHHHH-------------HHHHHHTTT-------C--CCCCC--SCCBEEEEESS
T ss_pred -----HH-HHHHHHHhCcCCccchHHHHHH-------------HHHHHHHhc-------C--CCCCC--CCCEEEEEeCC
Confidence 00 01111111110 1111111100 000000000 0 12456 89999999964
Q ss_pred CCCCCHHHHHHHhcccC-CceEEEeCCCCCCCC-CChHHHHHHHHHHHHhhcC
Q 017180 323 SPRRSKAEMEALKGAKG-VTKFVEVPGALLPQE-EYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 323 D~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~-e~pe~~~~~i~~fl~~~~~ 373 (376)
| .++... ..+.+..+ +.++++++++|+.++ ++|+++++.|.+||.+...
T Consensus 233 ~-~~~~~~-~~~~~~~~~~~~~~~i~ggH~~~~~e~~~~~~~~i~~fl~~~~~ 283 (300)
T 1kez_A 233 P-MGPWPD-DSWKPTWPFEHDTVAVPGDHFTMVQEHADAIARHIDAWLGGGNS 283 (300)
T ss_dssp C-SSCCCS-SCCSCCCSSCCEEEEESSCTTTSSSSCSHHHHHHHHHHHTCC--
T ss_pred C-CCCCcc-cchhhhcCCCCeEEEecCCChhhccccHHHHHHHHHHHHHhccC
Confidence 4 444333 34555555 579999998999886 9999999999999987643
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=180.19 Aligned_cols=215 Identities=13% Similarity=0.124 Sum_probs=140.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+++|||+||++..++...|..++..|.. +|+|+++|+||||.|+.+ ..+.+.+++++.++++.+. ..+
T Consensus 81 ~~~lv~lhG~~~~~~~~~~~~~~~~L~~-----~~~v~~~d~~G~G~~~~~--~~~~~~~~~~~~~~l~~~~-----~~~ 148 (319)
T 3lcr_A 81 GPQLILVCPTVMTTGPQVYSRLAEELDA-----GRRVSALVPPGFHGGQAL--PATLTVLVRSLADVVQAEV-----ADG 148 (319)
T ss_dssp SCEEEEECCSSTTCSGGGGHHHHHHHCT-----TSEEEEEECTTSSTTCCE--ESSHHHHHHHHHHHHHHHH-----TTS
T ss_pred CCeEEEECCCCcCCCHHHHHHHHHHhCC-----CceEEEeeCCCCCCCCCC--CCCHHHHHHHHHHHHHHhc-----CCC
Confidence 7899999996322788999999999966 899999999999987743 3588999999998888763 257
Q ss_pred cEEEEecchHHHHHHHHHHhC---CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccH
Q 017180 170 DLVIFGGGHAATLTVRAAKKN---LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNE 246 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~---p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (376)
+++|+||||||.+|+.+|.++ |++|+++|++++......+ .....+...+ . .
T Consensus 149 ~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~---------~~~~~~~~~~----------~------~ 203 (319)
T 3lcr_A 149 EFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDG---------GRPEELFRSA----------L------N 203 (319)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSC---------CHHHHHHHHH----------H------H
T ss_pred CEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccc---------hhhHHHHHHH----------H------H
Confidence 899999999999999999977 8899999999874211100 0000000000 0 0
Q ss_pred HHHHHHHHhcccCCCCCCC--hHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCC
Q 017180 247 KAIQSQYKSHVYSNPDNVT--PGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSP 324 (376)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~ 324 (376)
........ +. ... +..+..... ++...... ....+ ++|+|+|+|++|
T Consensus 204 ~~~~~~~~---~~---~~~~~~~~l~~~~~-------------~~~~~~~~---------~~~~i--~~PvLli~g~~~- 252 (319)
T 3lcr_A 204 ERFVEYLR---LT---GGGNLSQRITAQVW-------------CLELLRGW---------RPEGL--TAPTLYVRPAQP- 252 (319)
T ss_dssp HHHHHHHH---HH---CCCCHHHHHHHHHH-------------HHHHTTTC---------CCCCC--SSCEEEEEESSC-
T ss_pred HHHhhhhc---cc---CCCchhHHHHHHHH-------------HHHHHhcC---------CCCCc--CCCEEEEEeCCC-
Confidence 00000000 00 111 111111111 00000000 01356 899999999985
Q ss_pred CCCHHHHHHHhcccC-CceEEEeCCCCCCCCC--ChHHHHHHHHHHHHhhc
Q 017180 325 RRSKAEMEALKGAKG-VTKFVEVPGALLPQEE--YPAMVAQELYQFLQQTF 372 (376)
Q Consensus 325 ~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~e--~pe~~~~~i~~fl~~~~ 372 (376)
.++....+.+.+..+ ..++++++++|+.+++ +|+++++.|.+||.+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~g~H~~~~~~~~~~~va~~i~~fL~~~~ 303 (319)
T 3lcr_A 253 LVEQEKPEWRGDVLAAMGQVVEAPGDHFTIIEGEHVASTAHIVGDWLREAH 303 (319)
T ss_dssp SSSCCCTHHHHHHHHTCSEEEEESSCTTGGGSTTTHHHHHHHHHHHHHHHH
T ss_pred CCCcccchhhhhcCCCCceEEEeCCCcHHhhCcccHHHHHHHHHHHHHhcc
Confidence 444444555554444 5788899888776664 99999999999999864
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.8e-23 Score=171.96 Aligned_cols=186 Identities=10% Similarity=0.037 Sum_probs=121.4
Q ss_pred CcEEEecCCCCCccchHh--HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 91 KNILMIPTISDVSTVEEW--RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~--~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
|+|||+||++ ++...| ..+.+.+.+... +|+|+++|+||||+ +..+++..+++... .
T Consensus 3 ptIl~lHGf~--ss~~s~k~~~l~~~~~~~~~--~~~v~~pdl~~~g~-----------~~~~~l~~~~~~~~------~ 61 (202)
T 4fle_A 3 STLLYIHGFN--SSPSSAKATTFKSWLQQHHP--HIEMQIPQLPPYPA-----------EAAEMLESIVMDKA------G 61 (202)
T ss_dssp CEEEEECCTT--CCTTCHHHHHHHHHHHHHCT--TSEEECCCCCSSHH-----------HHHHHHHHHHHHHT------T
T ss_pred cEEEEeCCCC--CCCCccHHHHHHHHHHHcCC--CcEEEEeCCCCCHH-----------HHHHHHHHHHHhcC------C
Confidence 6899999998 665544 344555655311 59999999999985 45677788887775 7
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHH
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKA 248 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (376)
++++|+||||||.+|+.+|.++|..+..++...+.. ...........
T Consensus 62 ~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~--------------- 108 (202)
T 4fle_A 62 QSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPF------------------ELLSDYLGENQ--------------- 108 (202)
T ss_dssp SCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHH------------------HHGGGGCEEEE---------------
T ss_pred CcEEEEEEChhhHHHHHHHHHhcccchheeeccchH------------------HHHHHhhhhhc---------------
Confidence 889999999999999999999998766555443310 00000000000
Q ss_pred HHHHHHhcccC-CCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCC
Q 017180 249 IQSQYKSHVYS-NPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRS 327 (376)
Q Consensus 249 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~ 327 (376)
.... ............. . . ......++ ++|+|+|||++|.++|
T Consensus 109 -------~~~~~~~~~~~~~~~~~~----~-------------~----------~~~~~~~~--~~P~LiihG~~D~~Vp 152 (202)
T 4fle_A 109 -------NPYTGQKYVLESRHIYDL----K-------------A----------MQIEKLES--PDLLWLLQQTGDEVLD 152 (202)
T ss_dssp -------CTTTCCEEEECHHHHHHH----H-------------T----------TCCSSCSC--GGGEEEEEETTCSSSC
T ss_pred -------cccccccccchHHHHHHH----H-------------h----------hhhhhhcc--CceEEEEEeCCCCCCC
Confidence 0000 0000000000000 0 0 00112344 8899999999999999
Q ss_pred HHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 328 KAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
.+..+++. +++++++++++ |. ++.++++.+.|.+||+-.
T Consensus 153 ~~~s~~l~---~~~~l~i~~g~~H~--~~~~~~~~~~I~~FL~~a 192 (202)
T 4fle_A 153 YRQAVAYY---TPCRQTVESGGNHA--FVGFDHYFSPIVTFLGLA 192 (202)
T ss_dssp HHHHHHHT---TTSEEEEESSCCTT--CTTGGGGHHHHHHHHTCC
T ss_pred HHHHHHHh---hCCEEEEECCCCcC--CCCHHHHHHHHHHHHhhh
Confidence 98887764 57899999999 96 466788999999999754
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.90 E-value=8.8e-23 Score=187.26 Aligned_cols=235 Identities=15% Similarity=0.152 Sum_probs=150.6
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccc-hHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTV-EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~-~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
|.++......+....+.|+||++||++ ++. ..|..+...|.+. ||+|+++|+||+|.|.......+.+.+..+
T Consensus 177 g~~l~~~~~~P~~~~~~P~vv~~hG~~--~~~~~~~~~~~~~l~~~----G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~ 250 (415)
T 3mve_A 177 KGKITAHLHLTNTDKPHPVVIVSAGLD--SLQTDMWRLFRDHLAKH----DIAMLTVDMPSVGYSSKYPLTEDYSRLHQA 250 (415)
T ss_dssp SSEEEEEEEESCSSSCEEEEEEECCTT--SCGGGGHHHHHHTTGGG----TCEEEEECCTTSGGGTTSCCCSCTTHHHHH
T ss_pred CEEEEEEEEecCCCCCCCEEEEECCCC--ccHHHHHHHHHHHHHhC----CCEEEEECCCCCCCCCCCCCCCCHHHHHHH
Confidence 445544333222222267899999999 774 4555567777766 999999999999999865555567777788
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
+.+++..+. .+..++++|+|||+||.+++.+|..+|++++++|+++|... .... ...+.
T Consensus 251 v~~~l~~~~---~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~----~~~~-------~~~~~------- 309 (415)
T 3mve_A 251 VLNELFSIP---YVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIH----DIFA-------SPQKL------- 309 (415)
T ss_dssp HHHHGGGCT---TEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCS----HHHH-------CHHHH-------
T ss_pred HHHHHHhCc---CCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccc----cccc-------cHHHH-------
Confidence 888887764 11246899999999999999999999999999999998420 0000 00000
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCC
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGK 312 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 312 (376)
... +..+...+....... ...... +... +....... ..... ..++ +
T Consensus 310 -------~~~---~~~~~~~~~~~~g~~--~~~~~~---~~~~-------------~~~~~~~~---~~~~~-~~~i--~ 355 (415)
T 3mve_A 310 -------QQM---PKMYLDVLASRLGKS--VVDIYS---LSGQ-------------MAAWSLKV---QGFLS-SRKT--K 355 (415)
T ss_dssp -------TTS---CHHHHHHHHHHTTCS--SBCHHH---HHHH-------------GGGGCTTT---TTTTT-SSCB--S
T ss_pred -------HHh---HHHHHHHHHHHhCCC--ccCHHH---HHHH-------------HhhcCccc---ccccc-cCCC--C
Confidence 000 011111111111100 011110 0000 00000000 00000 2466 8
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC--CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 313 LPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA--LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 313 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~--H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
+|+|+|+|++|.++|.+..+.+.+..+++++++++++ |. .++++.+.+.+||.+.+.
T Consensus 356 ~PvLii~G~~D~~vp~~~~~~l~~~~~~~~l~~i~g~~~h~----~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 356 VPILAMSLEGDPVSPYSDNQMVAFFSTYGKAKKISSKTITQ----GYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp SCEEEEEETTCSSSCHHHHHHHHHTBTTCEEEEECCCSHHH----HHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEeCCCCCCCHHHHHHHHHhCCCceEEEecCCCccc----chHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999888999999999994 43 677899999999998753
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-22 Score=171.17 Aligned_cols=202 Identities=14% Similarity=0.061 Sum_probs=143.5
Q ss_pred CceeEEEEecccCCC-CCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC---------
Q 017180 73 NSINIYYEKHERESP-DPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM--------- 142 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~-~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~--------- 142 (376)
+|.++.+....+... ++.|+||++||++ ++...|..++..|+++ ||.|+++|+||+|.+.....
T Consensus 14 ~~~~~~~~~~~p~~~~~~~p~vv~~HG~~--g~~~~~~~~~~~l~~~----G~~v~~~d~~g~g~~~~~~~~~~~~~~~~ 87 (241)
T 3f67_A 14 QGENMPAYHARPKNADGPLPIVIVVQEIF--GVHEHIRDLCRRLAQE----GYLAIAPELYFRQGDPNEYHDIPTLFKEL 87 (241)
T ss_dssp TTEEEEEEEEEETTCCSCEEEEEEECCTT--CSCHHHHHHHHHHHHT----TCEEEEECTTTTTCCGGGCCSHHHHHHHT
T ss_pred CCcceEEEEecCCCCCCCCCEEEEEcCcC--ccCHHHHHHHHHHHHC----CcEEEEecccccCCCCCchhhHHHHHHHh
Confidence 355665554443322 2257899999999 8889999999999886 99999999999987763221
Q ss_pred --CCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhh
Q 017180 143 --DYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMET 220 (376)
Q Consensus 143 --~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~ 220 (376)
..+.+...+|+.++++.+.... ...++++++|||+||.+++.++.++|+ +.+++++.+......
T Consensus 88 ~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~------------ 153 (241)
T 3f67_A 88 VSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEK------------ 153 (241)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCC------------
T ss_pred hhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCC------------
Confidence 2334566778887777664221 124679999999999999999999887 777777665210000
Q ss_pred hhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHH
Q 017180 221 RYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 300 (376)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (376)
..+. . . +
T Consensus 154 -----------------------------------~~~~---~-------------------------------~--~-- 160 (241)
T 3f67_A 154 -----------------------------------SLNS---P-------------------------------K--H-- 160 (241)
T ss_dssp -----------------------------------CSSS---C-------------------------------C--C--
T ss_pred -----------------------------------ccCC---c-------------------------------c--C--
Confidence 0000 0 0 0
Q ss_pred HHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc----CCceEEEeCCC-CCCCCC--------ChHHHHHHHHHH
Q 017180 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK----GVTKFVEVPGA-LLPQEE--------YPAMVAQELYQF 367 (376)
Q Consensus 301 ~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~-H~~~~e--------~pe~~~~~i~~f 367 (376)
....+.++ ++|+++++|++|..++.+..+.+.+.. +++++++++++ |....+ ..++..+.+.+|
T Consensus 161 -~~~~~~~~--~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~f 237 (241)
T 3f67_A 161 -PVDIAVDL--NAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAW 237 (241)
T ss_dssp -HHHHGGGC--CSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHH
T ss_pred -HHHhhhhc--CCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHH
Confidence 23345666 899999999999999988777775443 78999999998 987643 236788889999
Q ss_pred HHh
Q 017180 368 LQQ 370 (376)
Q Consensus 368 l~~ 370 (376)
|++
T Consensus 238 l~~ 240 (241)
T 3f67_A 238 FAQ 240 (241)
T ss_dssp HTT
T ss_pred Hhh
Confidence 975
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-21 Score=173.05 Aligned_cols=232 Identities=16% Similarity=0.104 Sum_probs=143.4
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCcc-chHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC----------
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVST-VEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK---------- 141 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~-~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~---------- 141 (376)
+|.++.+....+...++.|+||++||++ ++ ...|.... .|.+. ||.|+++|+||+|.|..+.
T Consensus 65 ~g~~i~~~~~~P~~~~~~p~vv~~HG~~--~~~~~~~~~~~-~l~~~----g~~v~~~d~rg~g~s~~~~~~~~~~~~~~ 137 (318)
T 1l7a_A 65 GNARITGWYAVPDKEGPHPAIVKYHGYN--ASYDGEIHEMV-NWALH----GYATFGMLVRGQQRSEDTSISPHGHALGW 137 (318)
T ss_dssp GGEEEEEEEEEESSCSCEEEEEEECCTT--CCSGGGHHHHH-HHHHT----TCEEEEECCTTTSSSCCCCCCSSCCSSSS
T ss_pred CCCEEEEEEEeeCCCCCccEEEEEcCCC--CCCCCCccccc-chhhC----CcEEEEecCCCCCCCCCcccccCCccccc
Confidence 4666665544332222257899999999 88 88887766 55554 9999999999999998441
Q ss_pred --------CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccC
Q 017180 142 --------MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFG 213 (376)
Q Consensus 142 --------~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~ 213 (376)
..+......+|+.++++.+.........+++++|||+||.+++.+|..+|+ +.++|+++|....
T Consensus 138 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~------- 209 (318)
T 1l7a_A 138 MTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSN------- 209 (318)
T ss_dssp TTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCC-------
T ss_pred eeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccC-------
Confidence 112234556666666555431111123689999999999999999999885 7888888873210
Q ss_pred CCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccC
Q 017180 214 RDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLL 293 (376)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (376)
...........+ + . .+...+... . ............. ..
T Consensus 210 -------~~~~~~~~~~~~------~------~-~~~~~~~~~-~------~~~~~~~~~~~~~--------------~~ 248 (318)
T 1l7a_A 210 -------FERAIDVALEQP------Y------L-EINSFFRRN-G------SPETEVQAMKTLS--------------YF 248 (318)
T ss_dssp -------HHHHHHHCCSTT------T------T-HHHHHHHHS-C------CHHHHHHHHHHHH--------------TT
T ss_pred -------HHHHHhcCCcCc------c------H-HHHHHHhcc-C------CcccHHHHHHhhc--------------cc
Confidence 000000000000 0 0 000001000 0 0011111100000 00
Q ss_pred CCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC-CceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 294 DPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG-VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 294 ~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
+ ....+.++ ++|+++++|++|.+++.+..+.+.+..+ ++++++++++ |. .+.++.+.+.+||.+.
T Consensus 249 ~-------~~~~~~~~--~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~----~~~~~~~~~~~fl~~~ 315 (318)
T 1l7a_A 249 D-------IMNLADRV--KVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHE----YIPAFQTEKLAFFKQI 315 (318)
T ss_dssp C-------HHHHGGGC--CSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSS----CCHHHHHHHHHHHHHH
T ss_pred c-------HHHHHhhC--CCCEEEEeccCCCCCCcccHHHHHhhcCCCeeEEEccCCCCC----CcchhHHHHHHHHHHH
Confidence 0 34456777 8999999999999999988888876665 4899999998 99 2456788899999887
Q ss_pred cC
Q 017180 372 FE 373 (376)
Q Consensus 372 ~~ 373 (376)
+.
T Consensus 316 l~ 317 (318)
T 1l7a_A 316 LK 317 (318)
T ss_dssp HC
T ss_pred hC
Confidence 53
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-23 Score=181.06 Aligned_cols=191 Identities=9% Similarity=0.055 Sum_probs=138.5
Q ss_pred CCcEEEecCCC-CCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTIS-DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~-~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+|+|||+||.+ ..++...|..++..|.+. ||+|+++|+||+|. .+.+.+++|+.++++.+.... .
T Consensus 63 ~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~----G~~v~~~d~~~~~~-------~~~~~~~~d~~~~~~~l~~~~---~ 128 (262)
T 2pbl_A 63 VGLFVFVHGGYWMAFDKSSWSHLAVGALSK----GWAVAMPSYELCPE-------VRISEITQQISQAVTAAAKEI---D 128 (262)
T ss_dssp SEEEEEECCSTTTSCCGGGCGGGGHHHHHT----TEEEEEECCCCTTT-------SCHHHHHHHHHHHHHHHHHHS---C
T ss_pred CCEEEEEcCcccccCChHHHHHHHHHHHhC----CCEEEEeCCCCCCC-------CChHHHHHHHHHHHHHHHHhc---c
Confidence 78899999943 116778899999999886 89999999999874 457788888888888775111 1
Q ss_pred CcEEEEecchHHHHHHHHHHhC------CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhh
Q 017180 169 SDLVIFGGGHAATLTVRAAKKN------LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNML 242 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~------p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (376)
.+++|+||||||.+++.+|.++ |++++++|+++|.... .. .. ....
T Consensus 129 ~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~--~~-----------------~~---------~~~~ 180 (262)
T 2pbl_A 129 GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDL--RP-----------------LL---------RTSM 180 (262)
T ss_dssp SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCC--GG-----------------GG---------GSTT
T ss_pred CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCc--hH-----------------HH---------hhhh
Confidence 6899999999999999999987 8999999999984210 00 00 0000
Q ss_pred hccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCC
Q 017180 243 VSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEG 322 (376)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~ 322 (376)
... + ....+... . . . ....+.++ ++|+++++|++
T Consensus 181 ---~~~----~---------~~~~~~~~----~-------------~----~-------~~~~~~~~--~~P~lii~G~~ 214 (262)
T 2pbl_A 181 ---NEK----F---------KMDADAAI----A-------------E----S-------PVEMQNRY--DAKVTVWVGGA 214 (262)
T ss_dssp ---HHH----H---------CCCHHHHH----H-------------T----C-------GGGCCCCC--SCEEEEEEETT
T ss_pred ---hhh----h---------CCCHHHHH----h-------------c----C-------cccccCCC--CCCEEEEEeCC
Confidence 000 0 00000000 0 0 0 00112345 89999999999
Q ss_pred CCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 323 SPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 323 D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
|..++.+..+.+.+..+ +++++++++ |+.+.|.+++....|.+++.
T Consensus 215 D~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~ 261 (262)
T 2pbl_A 215 ERPAFLDQAIWLVEAWD-ADHVIAFEKHHFNVIEPLADPESDLVAVIT 261 (262)
T ss_dssp SCHHHHHHHHHHHHHHT-CEEEEETTCCTTTTTGGGGCTTCHHHHHHH
T ss_pred CCcccHHHHHHHHHHhC-CeEEEeCCCCcchHHhhcCCCCcHHHHHHh
Confidence 99999999999988777 999999998 99999999888888887764
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=172.01 Aligned_cols=183 Identities=12% Similarity=0.092 Sum_probs=136.0
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEe-------------------CCCCCcCCCCCCCCCCHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIV-------------------DWPGLGYSDRPKMDYNADVME 150 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~-------------------D~~G~G~S~~~~~~~~~~~~~ 150 (376)
+|+|||+||++ ++...|..++..|.+. ||+|+++ |++|+ .+..+....+.++++
T Consensus 23 ~~~vv~lHG~~--~~~~~~~~~~~~l~~~----g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~~~~~~~~~~~~ 95 (232)
T 1fj2_A 23 TAAVIFLHGLG--DTGHGWAEAFAGIRSS----HIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDSQEDESGIKQAA 95 (232)
T ss_dssp SEEEEEECCSS--SCHHHHHHHHHTTCCT----TEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTCCBCHHHHHHHH
T ss_pred CceEEEEecCC--CccchHHHHHHHHhcC----CcEEEecCCCccccccccccccccccccccC-CcccccccHHHHHHH
Confidence 78899999999 9999999999888875 8999998 66777 333444456778888
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
+++.++++.+.. .....++++++|||+||.+++.++.++|++++++|+++|....
T Consensus 96 ~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~------------------------ 150 (232)
T 1fj2_A 96 ENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPL------------------------ 150 (232)
T ss_dssp HHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTT------------------------
T ss_pred HHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCC------------------------
Confidence 899888887510 0012378999999999999999999999999999999983200
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhccc
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLE 310 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 310 (376)
.... . . . ...+..+
T Consensus 151 --------~~~~----------------~--~------------------~---------------------~~~~~~~- 164 (232)
T 1fj2_A 151 --------RASF----------------P--Q------------------G---------------------PIGGANR- 164 (232)
T ss_dssp --------GGGS----------------C--S------------------S---------------------CCCSTTT-
T ss_pred --------Cccc----------------c--c------------------c---------------------ccccccC-
Confidence 0000 0 0 0 0012234
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHhccc------CCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcCCC
Q 017180 311 GKLPLLVVSTEGSPRRSKAEMEALKGAK------GVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFEPS 375 (376)
Q Consensus 311 ~~~Pvlii~G~~D~~~~~~~~~~~~~~~------~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~~~ 375 (376)
++|+++++|++|.+++.+..+.+.+.. +++++++++++ |..+ ++ ..+.+.+||.+.+...
T Consensus 165 -~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~---~~-~~~~i~~~l~~~l~~~ 231 (232)
T 1fj2_A 165 -DISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSC---QQ-EMMDVKQFIDKLLPPI 231 (232)
T ss_dssp -TCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCC---HH-HHHHHHHHHHHHSCCC
T ss_pred -CCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCcccC---HH-HHHHHHHHHHHhcCCC
Confidence 789999999999999988877665433 56999999998 9984 33 3477888998876653
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.89 E-value=9e-23 Score=180.12 Aligned_cols=183 Identities=14% Similarity=0.179 Sum_probs=138.2
Q ss_pred eeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHH
Q 017180 75 INIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVV 154 (376)
Q Consensus 75 ~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~ 154 (376)
..++|...+. . .|+|||+||++ ++...|..+++.|.++ ||.|+++|+||+|.|.... .++..+.+.
T Consensus 85 ~~~~~p~~~~-~---~p~vv~~HG~~--~~~~~~~~~~~~la~~----G~~vv~~d~~g~g~s~~~~----~~d~~~~~~ 150 (306)
T 3vis_A 85 GTIYYPRENN-T---YGAIAISPGYT--GTQSSIAWLGERIASH----GFVVIAIDTNTTLDQPDSR----ARQLNAALD 150 (306)
T ss_dssp EEEEEESSCS-C---EEEEEEECCTT--CCHHHHHHHHHHHHTT----TEEEEEECCSSTTCCHHHH----HHHHHHHHH
T ss_pred eEEEeeCCCC-C---CCEEEEeCCCc--CCHHHHHHHHHHHHhC----CCEEEEecCCCCCCCcchH----HHHHHHHHH
Confidence 4455544443 1 67899999999 9999999999999997 9999999999999885321 123333333
Q ss_pred HHHhC----CCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 155 DLINA----PDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 155 ~~l~~----l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
.+.+. +. .....++++++|||+||.+++.+|.++|+ ++++|+++|...
T Consensus 151 ~l~~~~~~~~~--~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~------------------------- 202 (306)
T 3vis_A 151 YMLTDASSAVR--NRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL------------------------- 202 (306)
T ss_dssp HHHHTSCHHHH--TTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-------------------------
T ss_pred HHHhhcchhhh--ccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC-------------------------
Confidence 33332 00 00125689999999999999999999997 999999987310
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhccc
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLE 310 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 310 (376)
. ..+.++
T Consensus 203 ----------------------------~--------------------------------------------~~~~~~- 209 (306)
T 3vis_A 203 ----------------------------N--------------------------------------------KSWRDI- 209 (306)
T ss_dssp ----------------------------C--------------------------------------------CCCTTC-
T ss_pred ----------------------------c--------------------------------------------cccccC-
Confidence 0 012334
Q ss_pred CCCcEEEEEeCCCCCCCHH-HHHHHhcccC---CceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 311 GKLPLLVVSTEGSPRRSKA-EMEALKGAKG---VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 311 ~~~Pvlii~G~~D~~~~~~-~~~~~~~~~~---~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
++|+++++|++|.+++.+ ..+.+.+..+ +.++++++++ |+.+.+.++++.+.+.+||++.+.
T Consensus 210 -~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~gH~~~~~~~~~~~~~i~~fl~~~l~ 276 (306)
T 3vis_A 210 -TVPTLIIGAEYDTIASVTLHSKPFYNSIPSPTDKAYLELDGASHFAPNITNKTIGMYSVAWLKRFVD 276 (306)
T ss_dssp -CSCEEEEEETTCSSSCTTTTHHHHHHTCCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHS
T ss_pred -CCCEEEEecCCCcccCcchhHHHHHHHhccCCCceEEEECCCCccchhhchhHHHHHHHHHHHHHcc
Confidence 789999999999999987 4777765544 5679999998 999999999999999999998754
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-22 Score=175.61 Aligned_cols=203 Identities=9% Similarity=0.003 Sum_probs=134.6
Q ss_pred CCcEEEecCCCCC---ccchHhHHHHHHH----HhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCC
Q 017180 90 SKNILMIPTISDV---STVEEWRLVAQDI----VQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDS 162 (376)
Q Consensus 90 ~~~vvllHG~~~~---~~~~~~~~~~~~L----~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~ 162 (376)
.|+|||+||.+.. .+...|..++..| .+. ||+|+++|+|+.+.+.. ....+++.+.+..+++.++
T Consensus 41 ~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~----g~~vi~~d~r~~~~~~~---~~~~~d~~~~~~~l~~~~~- 112 (273)
T 1vkh_A 41 REAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTES----TVCQYSIEYRLSPEITN---PRNLYDAVSNITRLVKEKG- 112 (273)
T ss_dssp CEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTC----CEEEEEECCCCTTTSCT---THHHHHHHHHHHHHHHHHT-
T ss_pred CeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccC----CcEEEEeecccCCCCCC---CcHHHHHHHHHHHHHHhCC-
Confidence 7889999995422 2567899999999 343 99999999999876542 2456677777777777765
Q ss_pred CCCCCCCcEEEEecchHHHHHHHHHHhC-----------------CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHH
Q 017180 163 PVSSSESDLVIFGGGHAATLTVRAAKKN-----------------LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLL 225 (376)
Q Consensus 163 ~~~~~~~~~~lvG~S~Gg~ia~~~a~~~-----------------p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~ 225 (376)
.++++|+||||||.+++.+|.++ |++++++|+++|... .....
T Consensus 113 -----~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~---------------~~~~~ 172 (273)
T 1vkh_A 113 -----LTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYS---------------LKELL 172 (273)
T ss_dssp -----CCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCC---------------HHHHH
T ss_pred -----cCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeeccccc---------------HHHhh
Confidence 67899999999999999999985 788999999987320 00000
Q ss_pred HhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHH
Q 017180 226 RGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQL 305 (376)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (376)
. ..+ .....+...+. ........+.. .. ...+...
T Consensus 173 ~---~~~-----------~~~~~~~~~~~----~~~~~~~~~~~-----------------~~----------~~~~~~~ 207 (273)
T 1vkh_A 173 I---EYP-----------EYDCFTRLAFP----DGIQMYEEEPS-----------------RV----------MPYVKKA 207 (273)
T ss_dssp H---HCG-----------GGHHHHHHHCT----TCGGGCCCCHH-----------------HH----------HHHHHHH
T ss_pred h---hcc-----------cHHHHHHHHhc----ccccchhhccc-----------------cc----------Chhhhhc
Confidence 0 000 00111111000 00000000000 00 0001223
Q ss_pred HhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc----CCceEEEeCCC-CCCCCCChHHHHHHHHHHH
Q 017180 306 FADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK----GVTKFVEVPGA-LLPQEEYPAMVAQELYQFL 368 (376)
Q Consensus 306 ~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl 368 (376)
+.++ .+|+++++|++|.++|.+..+.+.+.. .++++++++++ |..++++ +++.+.|.+||
T Consensus 208 ~~~~--~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 208 LSRF--SIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIFDNI 272 (273)
T ss_dssp HHHH--TCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHHHTC
T ss_pred cccc--CCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCcccccccC-hHHHHHHHHHc
Confidence 3346 899999999999999988877775443 46899999999 9998888 88999999886
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.5e-22 Score=166.36 Aligned_cols=177 Identities=13% Similarity=0.052 Sum_probs=130.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHh--hhCCcceEEEEeCCC-------------------CCcCCCCCCCCCCHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQ--RVGKVNWRATIVDWP-------------------GLGYSDRPKMDYNADV 148 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~--~~~~~~~~Vi~~D~~-------------------G~G~S~~~~~~~~~~~ 148 (376)
.|+|||+||++ ++...|..++..|.+ . ||+|+++|+| |+|.+. .....+.++
T Consensus 14 ~~~vv~~HG~~--~~~~~~~~~~~~l~~~~~----g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~-~~~~~~~~~ 86 (218)
T 1auo_A 14 DACVIWLHGLG--ADRYDFMPVAEALQESLL----TTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPAR-SISLEELEV 86 (218)
T ss_dssp SEEEEEECCTT--CCTTTTHHHHHHHHTTCT----TEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSC-EECHHHHHH
T ss_pred CcEEEEEecCC--CChhhHHHHHHHHhhcCC----ceEEEeCCCCCccccCCCCCcccceecCcCCCccc-ccchHHHHH
Confidence 78899999999 999999999999996 5 9999998766 455443 223456777
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH-hCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK-KNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRG 227 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~-~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (376)
.++++.++++.+.. .....++++++|||+||.+++.+|. ++|++++++|+++|....
T Consensus 87 ~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~--------------------- 144 (218)
T 1auo_A 87 SAKMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT--------------------- 144 (218)
T ss_dssp HHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT---------------------
T ss_pred HHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC---------------------
Confidence 88888888877510 0012468999999999999999999 999999999999983200
Q ss_pred hhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHh
Q 017180 228 TLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFA 307 (376)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (376)
..+ . ..+ . . .
T Consensus 145 ------------~~~----------------~--~~~---------------------------------~---~----~ 154 (218)
T 1auo_A 145 ------------FGD----------------E--LEL---------------------------------S---A----S 154 (218)
T ss_dssp ------------CCT----------------T--CCC---------------------------------C---H----H
T ss_pred ------------chh----------------h--hhh---------------------------------h---h----c
Confidence 000 0 000 0 0 1
Q ss_pred cccCCCcEEEEEeCCCCCCCHHHHHHHhcccC----CceEEEeCCC-CCCCCCChHHHHHHHHHHH
Q 017180 308 DLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG----VTKFVEVPGA-LLPQEEYPAMVAQELYQFL 368 (376)
Q Consensus 308 ~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl 368 (376)
.+ ++|+++++|++|.+++.+..+.+.+..+ ++++++++ + |..+.+.++++.+.|.++|
T Consensus 155 ~~--~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~~~~~l~~~l 217 (218)
T 1auo_A 155 QQ--RIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAARL 217 (218)
T ss_dssp HH--TCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCCHHHHHHHHHHHHHHH
T ss_pred cc--CCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCCccCHHHHHHHHHHHHHHh
Confidence 23 7899999999999999988887765544 58999999 7 9988776665555444443
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-22 Score=169.48 Aligned_cols=184 Identities=9% Similarity=0.002 Sum_probs=135.8
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEe--CCCCCcCCCCC----CCCCCHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIV--DWPGLGYSDRP----KMDYNAD 147 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~--D~~G~G~S~~~----~~~~~~~ 147 (376)
|.+++|...|...+ .|+|||+||++ ++...|..++..|.+ ||.|+++ |+||+|.|... ...++.+
T Consensus 24 ~~~~~~~~~~~~~~--~~~vv~~HG~~--~~~~~~~~~~~~l~~-----g~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~ 94 (226)
T 2h1i_A 24 AMMKHVFQKGKDTS--KPVLLLLHGTG--GNELDLLPLAEIVDS-----EASVLSVRGNVLENGMPRFFRRLAEGIFDEE 94 (226)
T ss_dssp SSSCEEEECCSCTT--SCEEEEECCTT--CCTTTTHHHHHHHHT-----TSCEEEECCSEEETTEEESSCEEETTEECHH
T ss_pred CceeEEecCCCCCC--CcEEEEEecCC--CChhHHHHHHHHhcc-----CceEEEecCcccCCcchhhccccCccCcChh
Confidence 77888888876322 78999999999 999999999999998 8999999 99999988522 2334555
Q ss_pred HHHHHHHH---HH----hCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhh
Q 017180 148 VMEKFVVD---LI----NAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMET 220 (376)
Q Consensus 148 ~~~~~l~~---~l----~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~ 220 (376)
.+.+++.+ ++ +..+ ....+++++|||+||.+++.+|.++|++++++|+++|....
T Consensus 95 ~~~~~~~~~~~~l~~~~~~~~----~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~-------------- 156 (226)
T 2h1i_A 95 DLIFRTKELNEFLDEAAKEYK----FDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPR-------------- 156 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT----CCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSC--------------
T ss_pred hHHHHHHHHHHHHHHHHhhcC----CCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCc--------------
Confidence 55554433 33 3332 12578999999999999999999999999999999983100
Q ss_pred hhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHH
Q 017180 221 RYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 300 (376)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (376)
. . . .
T Consensus 157 -----------------------~-~------------~-------------------------------~--------- 160 (226)
T 2h1i_A 157 -----------------------R-G------------M-------------------------------Q--------- 160 (226)
T ss_dssp -----------------------S-S------------C-------------------------------C---------
T ss_pred -----------------------C-c------------c-------------------------------c---------
Confidence 0 0 0 0
Q ss_pred HHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC----CceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG----VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 301 ~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
....+ ++|+++++|++|.+++.+..+.+.+..+ +.++ +++++ |.... +..+.+.+||.+.
T Consensus 161 ----~~~~~--~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~~----~~~~~~~~~l~~~ 225 (226)
T 2h1i_A 161 ----LANLA--GKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HWENRGHQLTM----GEVEKAKEWYDKA 225 (226)
T ss_dssp ----CCCCT--TCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCCH----HHHHHHHHHHHHH
T ss_pred ----ccccc--CCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCCH----HHHHHHHHHHHHh
Confidence 00112 6899999999999999888877765443 4555 89998 99853 4556777787764
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.9e-22 Score=167.34 Aligned_cols=172 Identities=11% Similarity=0.120 Sum_probs=131.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHh--hhCCcceEEEEeCCC-------------------CCcCCCCCCCCCCHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQ--RVGKVNWRATIVDWP-------------------GLGYSDRPKMDYNADV 148 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~--~~~~~~~~Vi~~D~~-------------------G~G~S~~~~~~~~~~~ 148 (376)
.|+|||+||++ ++...|..++..|.+ . ||+|+++|+| |+|.+. +....+.++
T Consensus 24 ~~~vv~lHG~~--~~~~~~~~~~~~l~~~~~----g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~-~~~~~~~~~ 96 (226)
T 3cn9_A 24 DACIIWLHGLG--ADRTDFKPVAEALQMVLP----STRFILPQAPSQAVTVNGGWVMPSWYDILAFSPAR-AIDEDQLNA 96 (226)
T ss_dssp CEEEEEECCTT--CCGGGGHHHHHHHHHHCT----TEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTT-CBCHHHHHH
T ss_pred CCEEEEEecCC--CChHHHHHHHHHHhhcCC----CcEEEeecCCCCccccCCCCccccccccccccccc-cccchhHHH
Confidence 78999999999 999999999999995 4 9999998777 666432 334566788
Q ss_pred HHHHHHHHHhCC---CCCCCCCCCcEEEEecchHHHHHHHHHH-hCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHH
Q 017180 149 MEKFVVDLINAP---DSPVSSSESDLVIFGGGHAATLTVRAAK-KNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGL 224 (376)
Q Consensus 149 ~~~~l~~~l~~l---~~~~~~~~~~~~lvG~S~Gg~ia~~~a~-~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (376)
.++++.++++.+ + ...++++|+|||+||.+++.+|. ++|++++++|+++|...
T Consensus 97 ~~~~~~~~~~~~~~~~----~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~------------------- 153 (226)
T 3cn9_A 97 SADQVIALIDEQRAKG----IAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAP------------------- 153 (226)
T ss_dssp HHHHHHHHHHHHHHTT----CCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCG-------------------
T ss_pred HHHHHHHHHHHHHHcC----CCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCC-------------------
Confidence 888888888776 3 12468999999999999999999 99999999999998310
Q ss_pred HHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHH
Q 017180 225 LRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQ 304 (376)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (376)
.. .. + .+
T Consensus 154 ----------------~~---~~-----~---~~---------------------------------------------- 160 (226)
T 3cn9_A 154 ----------------TF---DD-----L---AL---------------------------------------------- 160 (226)
T ss_dssp ----------------GG---GG-----C---CC----------------------------------------------
T ss_pred ----------------Cc---hh-----h---hh----------------------------------------------
Confidence 00 00 0 00
Q ss_pred HHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC----CceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 305 LFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG----VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 305 ~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
....+ ++|+++++|++|.+++.+..+.+.+..+ ++++++++ + |..+.+.+ +.+.+||.+.
T Consensus 161 ~~~~~--~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~----~~i~~~l~~~ 225 (226)
T 3cn9_A 161 DERHK--RIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVSLEEI----HDIGAWLRKR 225 (226)
T ss_dssp CTGGG--GCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSCCHHHH----HHHHHHHHHH
T ss_pred ccccc--CCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCcchhhH----HHHHHHHHhh
Confidence 00233 7899999999999999988887765544 68999999 8 99876654 4567777654
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-21 Score=168.34 Aligned_cols=196 Identities=9% Similarity=0.009 Sum_probs=124.5
Q ss_pred CCcEEEecC---CCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhC---CCCC
Q 017180 90 SKNILMIPT---ISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA---PDSP 163 (376)
Q Consensus 90 ~~~vvllHG---~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~---l~~~ 163 (376)
.|+||++|| .. ++...|..++..|++. ||.|+++|+||||.+.. ......++..+.+..+.+. ++
T Consensus 35 ~p~vv~~HGgg~~~--~~~~~~~~~~~~l~~~----G~~v~~~d~~g~g~~~~-~~~~~~~d~~~~~~~l~~~~~~~~-- 105 (277)
T 3bxp_A 35 YPIMIICPGGGFTY--HSGREEAPIATRMMAA----GMHTVVLNYQLIVGDQS-VYPWALQQLGATIDWITTQASAHH-- 105 (277)
T ss_dssp EEEEEEECCSTTTS--CCCTTHHHHHHHHHHT----TCEEEEEECCCSTTTCC-CTTHHHHHHHHHHHHHHHHHHHHT--
T ss_pred ccEEEEECCCcccc--CCCccchHHHHHHHHC----CCEEEEEecccCCCCCc-cCchHHHHHHHHHHHHHhhhhhcC--
Confidence 678999999 55 6677889999999886 99999999999995443 2222233333333333322 11
Q ss_pred CCCCCCcEEEEecchHHHHHHHHHHhC--------------CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhh
Q 017180 164 VSSSESDLVIFGGGHAATLTVRAAKKN--------------LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 164 ~~~~~~~~~lvG~S~Gg~ia~~~a~~~--------------p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (376)
...++++|+||||||.+++.+|.++ +.+++++|+++|.......
T Consensus 106 --~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~-------------------- 163 (277)
T 3bxp_A 106 --VDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAG-------------------- 163 (277)
T ss_dssp --EEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTTSS--------------------
T ss_pred --CChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCCCC--------------------
Confidence 0145899999999999999999985 7889999999984210000
Q ss_pred ccCchhhHHhhhhhccHHHHH-HHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 230 RAPGVGWMMYNMLVSNEKAIQ-SQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
+. . ...+. ..+. . . .... ....+.+
T Consensus 164 ---------~~---~-~~~~~~~~~~-~-~--------------------------------~~~~-------~~~~~~~ 189 (277)
T 3bxp_A 164 ---------FP---T-TSAARNQITT-D-A--------------------------------RLWA-------AQRLVTP 189 (277)
T ss_dssp ---------SS---S-SHHHHHHHCS-C-G--------------------------------GGSB-------GGGGCCT
T ss_pred ---------CC---C-ccccchhccc-h-h--------------------------------hhcC-------Hhhcccc
Confidence 00 0 00000 0000 0 0 0000 1112334
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhc----ccCCceEEEeCCC-CCCCCCC---------------hHHHHHHHHHHH
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKG----AKGVTKFVEVPGA-LLPQEEY---------------PAMVAQELYQFL 368 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~-H~~~~e~---------------pe~~~~~i~~fl 368 (376)
+ .+|+|+++|++|.+++.+..+.+.+ ...++++++++++ |...... ++++.+.+.+||
T Consensus 190 ~--~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl 267 (277)
T 3bxp_A 190 A--SKPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWL 267 (277)
T ss_dssp T--SCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHH
T ss_pred C--CCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHH
Confidence 4 7899999999999999877766644 3456799999999 9644433 478899999999
Q ss_pred Hhhc
Q 017180 369 QQTF 372 (376)
Q Consensus 369 ~~~~ 372 (376)
++..
T Consensus 268 ~~~~ 271 (277)
T 3bxp_A 268 QEQG 271 (277)
T ss_dssp HHTT
T ss_pred Hhcc
Confidence 8764
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.2e-22 Score=171.30 Aligned_cols=176 Identities=10% Similarity=-0.029 Sum_probs=128.0
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEe--CCCCCcCCCCC----CCCCCHHHH---HHHHHHHHhCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIV--DWPGLGYSDRP----KMDYNADVM---EKFVVDLINAP 160 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~--D~~G~G~S~~~----~~~~~~~~~---~~~l~~~l~~l 160 (376)
.|+|||+||++ ++...|..++..|++ +|.|+++ |++|+|.|... ...++...+ ++++.++++.+
T Consensus 62 ~p~vv~~HG~~--~~~~~~~~~~~~l~~-----~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 134 (251)
T 2r8b_A 62 APLFVLLHGTG--GDENQFFDFGARLLP-----QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKAN 134 (251)
T ss_dssp SCEEEEECCTT--CCHHHHHHHHHHHST-----TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCC--CCHhHHHHHHHhcCC-----CceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 78999999999 999999999999998 7999999 89999988521 122343333 44444444443
Q ss_pred CCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhh
Q 017180 161 DSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYN 240 (376)
Q Consensus 161 ~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (376)
.... ..++++|+||||||.+++.+|.++|++++++|+++|....
T Consensus 135 ~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~---------------------------------- 178 (251)
T 2r8b_A 135 REHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPF---------------------------------- 178 (251)
T ss_dssp HHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCS----------------------------------
T ss_pred Hhcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCc----------------------------------
Confidence 1000 1678999999999999999999999999999999984200
Q ss_pred hhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEe
Q 017180 241 MLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVST 320 (376)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G 320 (376)
. . . . ....+ ++|+++++|
T Consensus 179 ---~-~-----------~--------------------~-------------------------~~~~~--~~P~li~~g 196 (251)
T 2r8b_A 179 ---E-P-----------K--------------------I-------------------------SPAKP--TRRVLITAG 196 (251)
T ss_dssp ---C-C-----------C--------------------C-------------------------CCCCT--TCEEEEEEE
T ss_pred ---c-c-----------c--------------------c-------------------------ccccc--CCcEEEecc
Confidence 0 0 0 0 00112 789999999
Q ss_pred CCCCCCCHHHHHHHhcccC--CceEE-EeCCC-CCCCCCChHHHHHHHHHHHHhhcCC
Q 017180 321 EGSPRRSKAEMEALKGAKG--VTKFV-EVPGA-LLPQEEYPAMVAQELYQFLQQTFEP 374 (376)
Q Consensus 321 ~~D~~~~~~~~~~~~~~~~--~~~~~-~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~~ 374 (376)
++|..++.+..+.+.+..+ +.++. +++++ |..+.+.+ +.+.+||.+.++.
T Consensus 197 ~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~~~~----~~~~~~l~~~l~~ 250 (251)
T 2r8b_A 197 ERDPICPVQLTKALEESLKAQGGTVETVWHPGGHEIRSGEI----DAVRGFLAAYGGG 250 (251)
T ss_dssp TTCTTSCHHHHHHHHHHHHHHSSEEEEEEESSCSSCCHHHH----HHHHHHHGGGC--
T ss_pred CCCccCCHHHHHHHHHHHHHcCCeEEEEecCCCCccCHHHH----HHHHHHHHHhcCC
Confidence 9999999988888876665 45554 77777 99876654 5567777776543
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=172.86 Aligned_cols=226 Identities=12% Similarity=0.034 Sum_probs=134.6
Q ss_pred CCcEEEecCCCC-CccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISD-VSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~-~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|+||++||++. .++...|..++..|++.. ||+|+++|+||+|++..+....+.....+.+.+.+++++ ...
T Consensus 73 ~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~---g~~v~~~d~rg~g~~~~~~~~~d~~~~~~~l~~~~~~~~----~d~ 145 (311)
T 2c7b_A 73 LPAVLYYHGGGFVFGSIETHDHICRRLSRLS---DSVVVSVDYRLAPEYKFPTAVEDAYAALKWVADRADELG----VDP 145 (311)
T ss_dssp EEEEEEECCSTTTSCCTGGGHHHHHHHHHHH---TCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHT----EEE
T ss_pred CcEEEEECCCcccCCChhhhHHHHHHHHHhc---CCEEEEecCCCCCCCCCCccHHHHHHHHHHHHhhHHHhC----CCc
Confidence 578999999762 245677888898998621 799999999999998754322223333333444444443 013
Q ss_pred CcEEEEecchHHHHHHHHHHhCCC----CcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhc
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLV----KPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVS 244 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~----~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (376)
++++|+|||+||.+++.+|.++|+ .++++|+++|.... . +.. ............
T Consensus 146 ~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~--~---~~~---~~~~~~~~~~~~-------------- 203 (311)
T 2c7b_A 146 DRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNM--T---GVP---TASLVEFGVAET-------------- 203 (311)
T ss_dssp EEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCC--S---SCC---CHHHHHHHHCTT--------------
T ss_pred hhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCC--c---ccc---ccCCccHHHhcc--------------
Confidence 679999999999999999987665 59999999984310 0 000 000000000000
Q ss_pred cHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCC
Q 017180 245 NEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSP 324 (376)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~ 324 (376)
. ..+......+......... ... .....+ +...+..+ . |+++++|++|.
T Consensus 204 ----------------~-~~~~~~~~~~~~~~~~~~~-~~~----~~~~~p------~~~~l~~~--~-P~lii~G~~D~ 252 (311)
T 2c7b_A 204 ----------------T-SLPIELMVWFGRQYLKRPE-EAY----DFKASP------LLADLGGL--P-PALVVTAEYDP 252 (311)
T ss_dssp ----------------C-SSCHHHHHHHHHHHCSSTT-GGG----STTTCG------GGSCCTTC--C-CEEEEEETTCT
T ss_pred ----------------C-CCCHHHHHHHHHHhCCCCc-ccc----CcccCc------ccccccCC--C-cceEEEcCCCC
Confidence 0 0111211111111110000 000 000000 11123333 3 99999999999
Q ss_pred CCCHH--HHHHHhcccCCceEEEeCCC-CCCC-----CCChHHHHHHHHHHHHhhcCCC
Q 017180 325 RRSKA--EMEALKGAKGVTKFVEVPGA-LLPQ-----EEYPAMVAQELYQFLQQTFEPS 375 (376)
Q Consensus 325 ~~~~~--~~~~~~~~~~~~~~~~~~~~-H~~~-----~e~pe~~~~~i~~fl~~~~~~~ 375 (376)
+++.. ..+.+.+...++++++++++ |... .+.++++.+.|.+||++.++.|
T Consensus 253 ~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~s 311 (311)
T 2c7b_A 253 LRDEGELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQPS 311 (311)
T ss_dssp THHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTCC-
T ss_pred chHHHHHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhcCC
Confidence 98753 33555666778999999998 9865 4567899999999999987654
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-21 Score=181.11 Aligned_cols=102 Identities=12% Similarity=0.085 Sum_probs=82.0
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
.|+||++||++ ++... ..+..|+++ ||+|+++|+||+|.+......+..+++.+.+..+.+... ....
T Consensus 158 ~P~Vv~~hG~~--~~~~~--~~a~~La~~----Gy~V~a~D~rG~g~~~~~~~~~~~~d~~~~~~~l~~~~~----v~~~ 225 (422)
T 3k2i_A 158 FPGIIDIFGIG--GGLLE--YRASLLAGH----GFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQ----VKGP 225 (422)
T ss_dssp BCEEEEECCTT--CSCCC--HHHHHHHTT----TCEEEEEECSSSTTSCSSCSCEETHHHHHHHHHHHTSTT----BCCS
T ss_pred cCEEEEEcCCC--cchhH--HHHHHHHhC----CCEEEEEccCCCCCCCCCcccCCHHHHHHHHHHHHhCcC----cCCC
Confidence 68999999998 65333 357888886 999999999999998765555667777776666665543 1257
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
+++|+||||||.+++.+|.++|+ ++++|+++|..
T Consensus 226 ~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~ 259 (422)
T 3k2i_A 226 GIGLLGISLGADICLSMASFLKN-VSATVSINGSG 259 (422)
T ss_dssp SEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCS
T ss_pred CEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcc
Confidence 89999999999999999999997 99999998753
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-21 Score=172.01 Aligned_cols=233 Identities=10% Similarity=0.116 Sum_probs=142.7
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCC-CccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHH
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISD-VSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVM 149 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~-~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~ 149 (376)
..+|+++++...+.+. +|+|||+||.+. .++...|..++..|++. .||+|+++|+||.+... .....++.
T Consensus 80 ~~~~~~~~~~~p~~~~---~p~vv~lHGgg~~~~~~~~~~~~~~~la~~---~g~~vi~~D~r~~~~~~---~~~~~~d~ 150 (326)
T 3d7r_A 80 SLDDMQVFRFNFRHQI---DKKILYIHGGFNALQPSPFHWRLLDKITLS---TLYEVVLPIYPKTPEFH---IDDTFQAI 150 (326)
T ss_dssp EETTEEEEEEESTTCC---SSEEEEECCSTTTSCCCHHHHHHHHHHHHH---HCSEEEEECCCCTTTSC---HHHHHHHH
T ss_pred EECCEEEEEEeeCCCC---CeEEEEECCCcccCCCCHHHHHHHHHHHHH---hCCEEEEEeCCCCCCCC---chHHHHHH
Confidence 3347777644332222 688999999551 14677888888888742 17999999999976533 22346677
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCC----cceEEEeccCCCCCCCcccCCCCchhhhh-HH
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVK----PTAIAAVAPTWAGPLPIVFGRDSSMETRY-GL 224 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~----v~~lvl~~p~~~~~~~~~~~~~~~~~~~~-~~ 224 (376)
.+++..+++.++ .++++|+||||||.+|+.+|.++|++ ++++|+++|........ .. .. ..
T Consensus 151 ~~~~~~l~~~~~------~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~----~~----~~~~~ 216 (326)
T 3d7r_A 151 QRVYDQLVSEVG------HQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSN----KD----ISDAL 216 (326)
T ss_dssp HHHHHHHHHHHC------GGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCC----TT----CCHHH
T ss_pred HHHHHHHHhccC------CCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCC----hh----HHhhh
Confidence 777777777764 67899999999999999999987766 99999999853211000 00 00 00
Q ss_pred HHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHH
Q 017180 225 LRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQ 304 (376)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (376)
. ...+... ...+. .+........... ... ...
T Consensus 217 ~---~~~~~~~----------~~~~~--------------------~~~~~~~~~~~~~----------~~~-----~~~ 248 (326)
T 3d7r_A 217 I---EQDAVLS----------QFGVN--------------------EIMKKWANGLPLT----------DKR-----ISP 248 (326)
T ss_dssp H---HHCSSCC----------HHHHH--------------------HHHHHHHTTSCTT----------STT-----TSG
T ss_pred c---ccCcccC----------HHHHH--------------------HHHHHhcCCCCCC----------CCe-----ECc
Confidence 0 0000000 00111 0000000000000 000 000
Q ss_pred HHhcccCCCcEEEEEeCCCCCCCH--HHHHHHhcccCCceEEEeCCC-CCCCC---CChHHHHHHHHHHHHhhcCC
Q 017180 305 LFADLEGKLPLLVVSTEGSPRRSK--AEMEALKGAKGVTKFVEVPGA-LLPQE---EYPAMVAQELYQFLQQTFEP 374 (376)
Q Consensus 305 ~~~~i~~~~Pvlii~G~~D~~~~~--~~~~~~~~~~~~~~~~~~~~~-H~~~~---e~pe~~~~~i~~fl~~~~~~ 374 (376)
....+..-+|+|+++|++|..++. ...+.+.+..+++++++++++ |..+. ++++++.+.|.+||.+.+..
T Consensus 249 ~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l~~ 324 (326)
T 3d7r_A 249 INGTIEGLPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDEDVTQ 324 (326)
T ss_dssp GGSCCTTCCCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSSHHHHHHHHHHHHHHTSCCCC
T ss_pred ccCCcccCCCEEEEEeCcccchHHHHHHHHHHHHCCCcEEEEEeCCCcccccccCCHHHHHHHHHHHHHHHHHhhc
Confidence 011111135999999999975542 234455566778999999999 99877 88899999999999887643
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-20 Score=167.32 Aligned_cols=231 Identities=14% Similarity=0.028 Sum_probs=140.5
Q ss_pred CceeEEEEecccCC-CCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--C-------
Q 017180 73 NSINIYYEKHERES-PDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--M------- 142 (376)
Q Consensus 73 ~g~~l~y~~~g~~~-~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~------- 142 (376)
+|.++.+....+.. .++.|+||++||++ .+...|.. ...|.+. ||.|+++|+||+|.|.... .
T Consensus 77 dg~~i~~~~~~P~~~~~~~p~vv~~HG~g--~~~~~~~~-~~~l~~~----G~~v~~~d~rG~g~s~~~~~~~~~p~~~~ 149 (337)
T 1vlq_A 77 RGQRIKGWLLVPKLEEEKLPCVVQYIGYN--GGRGFPHD-WLFWPSM----GYICFVMDTRGQGSGWLKGDTPDYPEGPV 149 (337)
T ss_dssp GGCEEEEEEEEECCSCSSEEEEEECCCTT--CCCCCGGG-GCHHHHT----TCEEEEECCTTCCCSSSCCCCCBCCSSSB
T ss_pred CCCEEEEEEEecCCCCCCccEEEEEcCCC--CCCCCchh-hcchhhC----CCEEEEecCCCCCCcccCCCCcccccccC
Confidence 46677665544322 22257899999999 66554433 3455554 9999999999999775321 1
Q ss_pred ----------------CCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCC
Q 017180 143 ----------------DYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAG 206 (376)
Q Consensus 143 ----------------~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~ 206 (376)
.+......+|+.++++.+........++++++|||+||.+++.+|..+| +++++|+.+|....
T Consensus 150 ~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~~p~~~~ 228 (337)
T 1vlq_A 150 DPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCH 228 (337)
T ss_dssp CCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCC
T ss_pred CCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEECCCcccC
Confidence 2223456667666665553111112358999999999999999999998 69999999884210
Q ss_pred CCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhH
Q 017180 207 PLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPA 286 (376)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (376)
.. .... ...... -..+...+... + +..+......
T Consensus 229 -----------~~---~~~~-~~~~~~------------~~~~~~~~~~~----~-----~~~~~~~~~~---------- 262 (337)
T 1vlq_A 229 -----------FR---RAVQ-LVDTHP------------YAEITNFLKTH----R-----DKEEIVFRTL---------- 262 (337)
T ss_dssp -----------HH---HHHH-HCCCTT------------HHHHHHHHHHC----T-----TCHHHHHHHH----------
T ss_pred -----------HH---HHHh-cCCCcc------------hHHHHHHHHhC----c-----hhHHHHHHhh----------
Confidence 00 0000 000000 00001011100 0 0000111000
Q ss_pred HHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC-CceEEEeCCC-CCCCCCChHHHHHHH
Q 017180 287 AFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG-VTKFVEVPGA-LLPQEEYPAMVAQEL 364 (376)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~-H~~~~e~pe~~~~~i 364 (376)
. ..+ ....+.++ ++|+|+++|++|..++.+..+.+.+..+ ++++++++++ |... .++..+.+
T Consensus 263 ---~-~~~-------~~~~~~~i--~~P~lii~G~~D~~~p~~~~~~~~~~l~~~~~~~~~~~~gH~~~---~~~~~~~~ 326 (337)
T 1vlq_A 263 ---S-YFD-------GVNFAARA--KIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGG---GSFQAVEQ 326 (337)
T ss_dssp ---H-TTC-------HHHHHTTC--CSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTT---HHHHHHHH
T ss_pred ---h-hcc-------HHHHHHHc--CCCEEEEeeCCCCCCCchhHHHHHHhcCCCcEEEEcCCCCCCCc---chhhHHHH
Confidence 0 000 33456677 8999999999999999998888876655 5889999998 9963 23567888
Q ss_pred HHHHHhhcC
Q 017180 365 YQFLQQTFE 373 (376)
Q Consensus 365 ~~fl~~~~~ 373 (376)
.+||.+.++
T Consensus 327 ~~fl~~~l~ 335 (337)
T 1vlq_A 327 VKFLKKLFE 335 (337)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 888887764
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3.2e-21 Score=185.38 Aligned_cols=224 Identities=14% Similarity=0.116 Sum_probs=148.9
Q ss_pred CceeEEEEecccCCC-CCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCC---CcCCCC-----CCCC
Q 017180 73 NSINIYYEKHERESP-DPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPG---LGYSDR-----PKMD 143 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~-~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G---~G~S~~-----~~~~ 143 (376)
+|.++.+....+... .+.|+||++||.+.......|..++..|+++ ||.|+++|+|| ||.|.. ....
T Consensus 342 ~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~----G~~v~~~d~rG~~~~G~s~~~~~~~~~~~ 417 (582)
T 3o4h_A 342 DGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAA----GFHVVMPNYRGSTGYGEEWRLKIIGDPCG 417 (582)
T ss_dssp TSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHT----TCEEEEECCTTCSSSCHHHHHTTTTCTTT
T ss_pred CCCEEEEEEEcCCCCCCCCcEEEEECCCcccccccccCHHHHHHHhC----CCEEEEeccCCCCCCchhHHhhhhhhccc
Confidence 576777666554321 1267899999987333377888899999887 99999999999 776631 1112
Q ss_pred CCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhH
Q 017180 144 YNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYG 223 (376)
Q Consensus 144 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~ 223 (376)
...+++.+.+..+++... .++++|+|||+||.+++.+|.++|++++++|+++|... +. .
T Consensus 418 ~~~~d~~~~~~~l~~~~~------~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~------------~~---~ 476 (582)
T 3o4h_A 418 GELEDVSAAARWARESGL------ASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVD------------WE---E 476 (582)
T ss_dssp HHHHHHHHHHHHHHHTTC------EEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCC------------HH---H
T ss_pred ccHHHHHHHHHHHHhCCC------cceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccC------------HH---H
Confidence 334555555555555532 33899999999999999999999999999999998320 00 0
Q ss_pred HHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHH
Q 017180 224 LLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFL 303 (376)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (376)
. ... .......+.. ..+. ...+. +.. . . ..
T Consensus 477 ----~----------~~~---~~~~~~~~~~-~~~~----~~~~~---~~~----------------~--s-------p~ 506 (582)
T 3o4h_A 477 ----M----------YEL---SDAAFRNFIE-QLTG----GSREI---MRS----------------R--S-------PI 506 (582)
T ss_dssp ----H----------HHT---CCHHHHHHHH-HHTT----TCHHH---HHH----------------T--C-------GG
T ss_pred ----H----------hhc---ccchhHHHHH-HHcC----cCHHH---HHh----------------c--C-------HH
Confidence 0 000 0000000000 0010 00000 000 0 0 11
Q ss_pred HHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc----CCceEEEeCCC-CCCC-CCChHHHHHHHHHHHHhhcC
Q 017180 304 QLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK----GVTKFVEVPGA-LLPQ-EEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 304 ~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~-H~~~-~e~pe~~~~~i~~fl~~~~~ 373 (376)
..+.++ ++|+|+++|++|..++.+..+.+.+.. .++++++++++ |... .++++++.+.+.+||++.+.
T Consensus 507 ~~~~~i--~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~l~ 580 (582)
T 3o4h_A 507 NHVDRI--KEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQRE 580 (582)
T ss_dssp GGGGGC--CSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcC--CCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHcC
Confidence 235567 899999999999999988888776543 35899999998 9987 67788999999999998765
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.86 E-value=9e-21 Score=163.06 Aligned_cols=173 Identities=8% Similarity=-0.045 Sum_probs=127.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhC----CCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA----PDSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~----l~~~~~ 165 (376)
.|+|||+||++ ++...|..++..|++. ||.|+++|+||.+. + .......+.+.+.... +.. .
T Consensus 49 ~p~vv~~HG~~--~~~~~~~~~~~~l~~~----G~~v~~~d~~~s~~---~---~~~~~~~~~l~~~~~~~~~~~~~--~ 114 (258)
T 2fx5_A 49 HPVILWGNGTG--AGPSTYAGLLSHWASH----GFVVAAAETSNAGT---G---REMLACLDYLVRENDTPYGTYSG--K 114 (258)
T ss_dssp EEEEEEECCTT--CCGGGGHHHHHHHHHH----TCEEEEECCSCCTT---S---HHHHHHHHHHHHHHHSSSSTTTT--T
T ss_pred ceEEEEECCCC--CCchhHHHHHHHHHhC----CeEEEEecCCCCcc---H---HHHHHHHHHHHhccccccccccc--c
Confidence 67899999999 8999999999999987 99999999996421 1 1222333444443331 110 0
Q ss_pred CCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhcc
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSN 245 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (376)
...++++++||||||.+++.+| .+.+++++++++|... . .
T Consensus 115 ~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~----------------------------------~-~--- 154 (258)
T 2fx5_A 115 LNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTL----------------------------------G-L--- 154 (258)
T ss_dssp EEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCS----------------------------------S-T---
T ss_pred cCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCccc----------------------------------c-c---
Confidence 1246899999999999999998 4668999999987310 0 0
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCC
Q 017180 246 EKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPR 325 (376)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~ 325 (376)
.+ ....+.++ ++|+|+|+|++|.+
T Consensus 155 -----------~~-------------------------------------------~~~~~~~i--~~P~lii~G~~D~~ 178 (258)
T 2fx5_A 155 -----------GH-------------------------------------------DSASQRRQ--QGPMFLMSGGGDTI 178 (258)
T ss_dssp -----------TC-------------------------------------------CGGGGGCC--SSCEEEEEETTCSS
T ss_pred -----------cc-------------------------------------------chhhhccC--CCCEEEEEcCCCcc
Confidence 00 00124456 89999999999999
Q ss_pred CCHHH-HHHHhccc-CCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 326 RSKAE-MEALKGAK-GVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 326 ~~~~~-~~~~~~~~-~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
++.+. .+.+.+.. .++++++++++ |+.+.++++++.+.|.+||++.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~i~~fl~~~l 228 (258)
T 2fx5_A 179 AFPYLNAQPVYRRANVPVFWGERRYVSHFEPVGSGGAYRGPSTAWFRFQL 228 (258)
T ss_dssp SCHHHHTHHHHHHCSSCEEEEEESSCCTTSSTTTCGGGHHHHHHHHHHHH
T ss_pred cCchhhHHHHHhccCCCeEEEEECCCCCccccchHHHHHHHHHHHHHHHh
Confidence 99876 66665443 46899999998 99999999999999999999654
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.2e-20 Score=166.26 Aligned_cols=222 Identities=13% Similarity=-0.011 Sum_probs=133.3
Q ss_pred CCcEEEecCCCCC-c--cchHhHHHHHHHH-hhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCC
Q 017180 90 SKNILMIPTISDV-S--TVEEWRLVAQDIV-QRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~-~--~~~~~~~~~~~L~-~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 165 (376)
.|+||++||.+.. + ....|..++..|+ +. ||.|+++|+||++++..+ ...++..+.+..+.+.......
T Consensus 113 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~----g~~vv~~d~rg~~~~~~~---~~~~D~~~~~~~l~~~~~~~~~ 185 (351)
T 2zsh_A 113 VPVILFFHGGSFAHSSANSAIYDTLCRRLVGLC----KCVVVSVNYRRAPENPYP---CAYDDGWIALNWVNSRSWLKSK 185 (351)
T ss_dssp CEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHH----TSEEEEECCCCTTTSCTT---HHHHHHHHHHHHHHTCGGGCCT
T ss_pred ceEEEEECCCcCcCCCCcchhHHHHHHHHHHHc----CCEEEEecCCCCCCCCCc---hhHHHHHHHHHHHHhCchhhcC
Confidence 6789999996521 2 2334888999998 55 899999999998876532 2345555555555543100001
Q ss_pred CCCC-cEEEEecchHHHHHHHHHHhCCC---CcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhh
Q 017180 166 SSES-DLVIFGGGHAATLTVRAAKKNLV---KPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNM 241 (376)
Q Consensus 166 ~~~~-~~~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (376)
...+ +++|+|||+||.+|+.+|.++|+ +++++|+++|....... ... .......+.
T Consensus 186 ~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~~~--------~~~----~~~~~~~~~-------- 245 (351)
T 2zsh_A 186 KDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNER--------TES----EKSLDGKYF-------- 245 (351)
T ss_dssp TTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCSSC--------CHH----HHHHTTTSS--------
T ss_pred CCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCCcC--------Chh----hhhcCCCcc--------
Confidence 1356 89999999999999999999888 89999999985321100 000 000000000
Q ss_pred hhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCC-cEEEEEe
Q 017180 242 LVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKL-PLLVVST 320 (376)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-Pvlii~G 320 (376)
........+............ ......... ....++++ .+ |+|+++|
T Consensus 246 ----------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~~l~~i--~~pP~Lii~G 293 (351)
T 2zsh_A 246 ----------------------VTVRDRDWYWKAFLPEGEDRE-HPACNPFSP-------RGKSLEGV--SFPKSLVVVA 293 (351)
T ss_dssp ----------------------CCHHHHHHHHHHHSCTTCCTT-STTTCTTST-------TSCCCTTC--CCCEEEEEEE
T ss_pred ----------------------cCHHHHHHHHHHhCCCCCCCC-CcccCCCCC-------CccchhhC--CCCCEEEEEc
Confidence 001111111111100000000 000000000 01124444 55 9999999
Q ss_pred CCCCCCCHH--HHHHHhcccCCceEEEeCCC-CCCCC----CChHHHHHHHHHHHHh
Q 017180 321 EGSPRRSKA--EMEALKGAKGVTKFVEVPGA-LLPQE----EYPAMVAQELYQFLQQ 370 (376)
Q Consensus 321 ~~D~~~~~~--~~~~~~~~~~~~~~~~~~~~-H~~~~----e~pe~~~~~i~~fl~~ 370 (376)
++|.+++.. ..+.+.+...++++++++++ |..+. ++++++.+.|.+||++
T Consensus 294 ~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 294 GLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp TTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred CCCcchHHHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 999988632 44455555668999999998 99877 7899999999999975
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.9e-21 Score=166.30 Aligned_cols=201 Identities=7% Similarity=-0.002 Sum_probs=132.4
Q ss_pred CCcEEEecCCC-CCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCC---CCCC
Q 017180 90 SKNILMIPTIS-DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPD---SPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~-~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~---~~~~ 165 (376)
.|+||++||.+ ..++...|..++..|+++ ||.|+++|+||+|.|+.. .......+|+.++++.+. ....
T Consensus 43 ~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~----G~~v~~~d~~g~g~s~~~---~~~~~~~~d~~~~~~~l~~~~~~~~ 115 (276)
T 3hxk_A 43 FPAIIICPGGGYQHISQRESDPLALAFLAQ----GYQVLLLNYTVMNKGTNY---NFLSQNLEEVQAVFSLIHQNHKEWQ 115 (276)
T ss_dssp BCEEEEECCSTTTSCCGGGSHHHHHHHHHT----TCEEEEEECCCTTSCCCS---CTHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred CCEEEEEcCCccccCCchhhHHHHHHHHHC----CCEEEEecCccCCCcCCC---CcCchHHHHHHHHHHHHHHhHHHcC
Confidence 68999999943 115577788899999986 999999999999997632 223344444444333221 1101
Q ss_pred CCCCcEEEEecchHHHHHHHHHHh-CCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhc
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKK-NLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVS 244 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~-~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (376)
....+++|+||||||.+++.++.+ .+.+++++|+++|....... ... .. .
T Consensus 116 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~--~~~----------------~~-----------~ 166 (276)
T 3hxk_A 116 INPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFG--WPS----------------DL-----------S 166 (276)
T ss_dssp BCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSS--CSS----------------SS-----------S
T ss_pred CCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhh--CCc----------------ch-----------h
Confidence 235689999999999999999998 78999999999984310000 000 00 0
Q ss_pred cHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCC
Q 017180 245 NEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSP 324 (376)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~ 324 (376)
. ...+. ++. ... . ....+.++ .+|+++++|++|.
T Consensus 167 ~---------~~~~~------~~~------------------~~~----~-------~~~~~~~~--~~P~lii~G~~D~ 200 (276)
T 3hxk_A 167 H---------FNFEI------ENI------------------SEY----N-------ISEKVTSS--TPPTFIWHTADDE 200 (276)
T ss_dssp S---------SCCCC------SCC------------------GGG----B-------TTTTCCTT--SCCEEEEEETTCS
T ss_pred h---------hhcCc------hhh------------------hhC----C-------hhhccccC--CCCEEEEecCCCc
Confidence 0 00000 000 000 0 11123445 8899999999999
Q ss_pred CCCHHHHHHHhc----ccCCceEEEeCCC-CCCCCCCh-------------HHHHHHHHHHHHhhc
Q 017180 325 RRSKAEMEALKG----AKGVTKFVEVPGA-LLPQEEYP-------------AMVAQELYQFLQQTF 372 (376)
Q Consensus 325 ~~~~~~~~~~~~----~~~~~~~~~~~~~-H~~~~e~p-------------e~~~~~i~~fl~~~~ 372 (376)
++|.+..+.+.+ ...++++++++++ |......+ +++.+.+.+||++..
T Consensus 201 ~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~ 266 (276)
T 3hxk_A 201 GVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQI 266 (276)
T ss_dssp SSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHH
T ss_pred eeChHHHHHHHHHHHHcCCCeEEEEECCCCCCccccCccccccccccCchHHHHHHHHHHHHHhCc
Confidence 999877766643 3456799999998 98666544 678899999999865
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-21 Score=162.67 Aligned_cols=174 Identities=10% Similarity=0.046 Sum_probs=122.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeC-------------CCCCcCCCCCC-CCCCHHHHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVD-------------WPGLGYSDRPK-MDYNADVMEKFVVD 155 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D-------------~~G~G~S~~~~-~~~~~~~~~~~l~~ 155 (376)
.| |||+||++ ++...|..++..|.. ++.|+++| ++|||.+.... .....+...+++.+
T Consensus 17 ~p-vv~lHG~g--~~~~~~~~~~~~l~~-----~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~ 88 (209)
T 3og9_A 17 AP-LLLLHSTG--GDEHQLVEIAEMIAP-----SHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLTD 88 (209)
T ss_dssp CC-EEEECCTT--CCTTTTHHHHHHHST-----TCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHHHHHHHHHH
T ss_pred CC-EEEEeCCC--CCHHHHHHHHHhcCC-----CceEEEecCCcCCCCcccceecccccccccCCCCHHHHHHHHHHHHH
Confidence 56 99999999 999999999999986 89999999 77888765221 12233344445555
Q ss_pred HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchh
Q 017180 156 LINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVG 235 (376)
Q Consensus 156 ~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (376)
+++.+........++++|+||||||.+++.+|.++|++++++|+++|....
T Consensus 89 ~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~----------------------------- 139 (209)
T 3og9_A 89 EVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLE----------------------------- 139 (209)
T ss_dssp HHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCC-----------------------------
T ss_pred HHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCC-----------------------------
Confidence 554331000012478999999999999999999999999999999873100
Q ss_pred hHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcE
Q 017180 236 WMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPL 315 (376)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pv 315 (376)
. . .. ..... .+|+
T Consensus 140 ----~---~-------------~~---------------------------------------------~~~~~--~~p~ 152 (209)
T 3og9_A 140 ----D---F-------------EQ---------------------------------------------TVQLD--DKHV 152 (209)
T ss_dssp ----C---C-------------CC---------------------------------------------CCCCT--TCEE
T ss_pred ----c---c-------------cc---------------------------------------------ccccc--CCCE
Confidence 0 0 00 00012 7899
Q ss_pred EEEEeCCCCCCCHHHHHHHhcc----cCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhh
Q 017180 316 LVVSTEGSPRRSKAEMEALKGA----KGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 316 lii~G~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
++++|++|.+++.+..+.+.+. ..++++++++++|... .+..+.+.+||.+.
T Consensus 153 li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~----~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 153 FLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESSLGHQLT----QEEVLAAKKWLTET 208 (209)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECSSTTSCC----HHHHHHHHHHHHHH
T ss_pred EEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcCCCCcCC----HHHHHHHHHHHHhh
Confidence 9999999999998877766433 3357788888449874 34567788898764
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-20 Score=174.70 Aligned_cols=102 Identities=11% Similarity=0.084 Sum_probs=81.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
.|+||++||.+ .+...+ .+..|+++ ||.|+++|+||+|.+..+......+++.+.+..+.+..+ ....
T Consensus 174 ~P~Vv~lhG~~--~~~~~~--~a~~La~~----Gy~Vla~D~rG~~~~~~~~~~~~~~d~~~a~~~l~~~~~----vd~~ 241 (446)
T 3hlk_A 174 FPGIVDMFGTG--GGLLEY--RASLLAGK----GFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPE----VKGP 241 (446)
T ss_dssp BCEEEEECCSS--CSCCCH--HHHHHHTT----TCEEEEECCSSSTTSCSCCSEEEHHHHHHHHHHHHTSTT----BCCS
T ss_pred CCEEEEECCCC--cchhhH--HHHHHHhC----CCEEEEeccCCCCCCCcchhhCCHHHHHHHHHHHHhCCC----CCCC
Confidence 68899999998 654333 47788876 999999999999998765445567777776766666543 1247
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
+++|+||||||.+++.+|.++|+ ++++|+++|..
T Consensus 242 ~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~ 275 (446)
T 3hlk_A 242 GVGLLGISKGGELCLSMASFLKG-ITAAVVINGSV 275 (446)
T ss_dssp SEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCS
T ss_pred CEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcc
Confidence 89999999999999999999997 99999998753
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-21 Score=191.21 Aligned_cols=223 Identities=12% Similarity=0.050 Sum_probs=144.2
Q ss_pred CCc-eeEEEEecccCC---CCCCCcEEEecCCCCCccc---hHhHH----HHHHHHhhhCCcceEEEEeCCCCCcCCCCC
Q 017180 72 ENS-INIYYEKHERES---PDPSKNILMIPTISDVSTV---EEWRL----VAQDIVQRVGKVNWRATIVDWPGLGYSDRP 140 (376)
Q Consensus 72 ~~g-~~l~y~~~g~~~---~~~~~~vvllHG~~~~~~~---~~~~~----~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~ 140 (376)
.+| .++++....+.. .++.|+||++||.+ .+. ..|.. ++..|+++ ||.|+++|+||+|.|..+
T Consensus 463 ~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~--~~~~~~~~~~~~~~~~~~~la~~----G~~v~~~d~rG~g~s~~~ 536 (706)
T 2z3z_A 463 ADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGP--HAQLVTKTWRSSVGGWDIYMAQK----GYAVFTVDSRGSANRGAA 536 (706)
T ss_dssp TTSSSEEEEEEECCTTCCTTSCEEEEEECCCCT--TCCCCCSCC----CCHHHHHHHT----TCEEEEECCTTCSSSCHH
T ss_pred CCCCEEEEEEEEeCCCCCCCCCccEEEEecCCC--CceeeccccccCchHHHHHHHhC----CcEEEEEecCCCcccchh
Confidence 356 788887765443 12247899999977 443 35654 57888876 999999999999998632
Q ss_pred C-----CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCC
Q 017180 141 K-----MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRD 215 (376)
Q Consensus 141 ~-----~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~ 215 (376)
. ..+.. ...+|+.++++.+.........+++|+||||||.+++.+|.++|++++++|+++|... .
T Consensus 537 ~~~~~~~~~~~-~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~----~----- 606 (706)
T 2z3z_A 537 FEQVIHRRLGQ-TEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVID----W----- 606 (706)
T ss_dssp HHHTTTTCTTH-HHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCC----G-----
T ss_pred HHHHHhhccCC-ccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccc----h-----
Confidence 1 12221 2234444444433211011246799999999999999999999999999999988420 0
Q ss_pred CchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCC
Q 017180 216 SSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDP 295 (376)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (376)
. . +. ..... .+. ..+. ..++. +... .
T Consensus 607 ---~--------~----------~~-----~~~~~-~~~----~~~~-~~~~~---~~~~------------------~- 632 (706)
T 2z3z_A 607 ---N--------R----------YA-----IMYGE-RYF----DAPQ-ENPEG---YDAA------------------N- 632 (706)
T ss_dssp ---G--------G----------SB-----HHHHH-HHH----CCTT-TCHHH---HHHH------------------C-
T ss_pred ---H--------H----------HH-----hhhhh-hhc----CCcc-cChhh---hhhC------------------C-
Confidence 0 0 00 00000 010 0000 00110 0000 0
Q ss_pred CCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc----CCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 296 VNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK----GVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 296 ~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
....+.++ ++|+|+++|++|..++.+..+.+.+.+ .++++++++++ |.++.++++++.+.|.+||.+
T Consensus 633 ------~~~~~~~i--~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 704 (706)
T 2z3z_A 633 ------LLKRAGDL--KGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGPDRVHLYETITRYFTD 704 (706)
T ss_dssp ------GGGGGGGC--CSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTTHHHHHHHHHHHHHHH
T ss_pred ------HhHhHHhC--CCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcccHHHHHHHHHHHHHH
Confidence 12245667 899999999999999988877775443 45699999998 999888899999999999987
Q ss_pred hc
Q 017180 371 TF 372 (376)
Q Consensus 371 ~~ 372 (376)
.+
T Consensus 705 ~l 706 (706)
T 2z3z_A 705 HL 706 (706)
T ss_dssp HC
T ss_pred hC
Confidence 53
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.7e-20 Score=165.30 Aligned_cols=221 Identities=14% Similarity=0.023 Sum_probs=134.0
Q ss_pred CCcEEEecCCC-CCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTIS-DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~-~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|+|||+||.+ ..++...|..++..|++. .||.|+++|+||+|++..+. ..++..+.+..+.+....- . ..
T Consensus 90 ~p~vv~~HGGg~~~g~~~~~~~~~~~La~~---~g~~Vv~~Dyrg~~~~~~p~---~~~d~~~~~~~l~~~~~~l-g-d~ 161 (323)
T 3ain_A 90 YGVLVYYHGGGFVLGDIESYDPLCRAITNS---CQCVTISVDYRLAPENKFPA---AVVDSFDALKWVYNNSEKF-N-GK 161 (323)
T ss_dssp CCEEEEECCSTTTSCCTTTTHHHHHHHHHH---HTSEEEEECCCCTTTSCTTH---HHHHHHHHHHHHHHTGGGG-T-CT
T ss_pred CcEEEEECCCccccCChHHHHHHHHHHHHh---cCCEEEEecCCCCCCCCCcc---hHHHHHHHHHHHHHhHHHh-C-CC
Confidence 68899999943 116778899999999862 17999999999999886442 3444444444444443100 0 25
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCc---ceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhcc
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKP---TAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSN 245 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v---~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (376)
++++|+|||+||.+|+.+|.++|+++ +++|+++|....... .... .......
T Consensus 162 ~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~--------~~~~----~~~~~~~------------- 216 (323)
T 3ain_A 162 YGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLI--------TKSL----YDNGEGF------------- 216 (323)
T ss_dssp TCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSC--------CHHH----HHHSSSS-------------
T ss_pred ceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCC--------CccH----HHhccCC-------------
Confidence 78999999999999999999877766 899999984311100 0000 0000000
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCC
Q 017180 246 EKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPR 325 (376)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~ 325 (376)
..+.+....+......... .. ......+ +...+..+ .|+|+++|++|.+
T Consensus 217 -----------------~l~~~~~~~~~~~~~~~~~-~~----~~~~~sp------~~~~l~~l---~P~lii~G~~D~l 265 (323)
T 3ain_A 217 -----------------FLTREHIDWFGQQYLRSFA-DL----LDFRFSP------ILADLNDL---PPALIITAEHDPL 265 (323)
T ss_dssp -----------------SSCHHHHHHHHHHHCSSGG-GG----GCTTTCG------GGSCCTTC---CCEEEEEETTCTT
T ss_pred -----------------CCCHHHHHHHHHHhCCCCc-cc----CCcccCc------ccCcccCC---CHHHEEECCCCcc
Confidence 0111111111111100000 00 0000000 00012333 4999999999998
Q ss_pred CC--HHHHHHHhcccCCceEEEeCCC-CCCCC-----CChHHHHHHHHHHHHhhcCC
Q 017180 326 RS--KAEMEALKGAKGVTKFVEVPGA-LLPQE-----EYPAMVAQELYQFLQQTFEP 374 (376)
Q Consensus 326 ~~--~~~~~~~~~~~~~~~~~~~~~~-H~~~~-----e~pe~~~~~i~~fl~~~~~~ 374 (376)
++ ....+++.+...++++++++++ |.... +.++++.+.+.+||++.+..
T Consensus 266 ~~~~~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 322 (323)
T 3ain_A 266 RDQGEAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFYG 322 (323)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHhcC
Confidence 85 2344555566678899999999 99765 45688999999999987643
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-21 Score=192.61 Aligned_cols=222 Identities=14% Similarity=0.092 Sum_probs=147.2
Q ss_pred CCc-eeEEEEecccCC---CCCCCcEEEecCCCCCccc---hHhH-----HHHHHHHhhhCCcceEEEEeCCCCCcCCCC
Q 017180 72 ENS-INIYYEKHERES---PDPSKNILMIPTISDVSTV---EEWR-----LVAQDIVQRVGKVNWRATIVDWPGLGYSDR 139 (376)
Q Consensus 72 ~~g-~~l~y~~~g~~~---~~~~~~vvllHG~~~~~~~---~~~~-----~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~ 139 (376)
.+| .+++|....+.. .++.|+||++||.+ .+. ..|. .++..|+++ ||.|+++|+||+|.|..
T Consensus 495 ~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~--~~~~~~~~~~~~~~~~~~~~l~~~----G~~v~~~d~rG~g~s~~ 568 (741)
T 2ecf_A 495 ADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGP--ASQTVTDSWPGRGDHLFNQYLAQQ----GYVVFSLDNRGTPRRGR 568 (741)
T ss_dssp TTSSCEEEEEEECCSSCCTTSCEEEEEECCCST--TCCSCSSCCCCSHHHHHHHHHHHT----TCEEEEECCTTCSSSCH
T ss_pred CCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCC--CcccccccccccchhHHHHHHHhC----CCEEEEEecCCCCCCCh
Confidence 367 888888776543 12246889999988 543 3454 578888876 99999999999999863
Q ss_pred CC-----C---CCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcc
Q 017180 140 PK-----M---DYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIV 211 (376)
Q Consensus 140 ~~-----~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~ 211 (376)
+. . ....+++.+.+..+.+.-. ....+++++||||||.+++.+|.++|++++++|+++|....
T Consensus 569 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~----~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~----- 639 (741)
T 2ecf_A 569 DFGGALYGKQGTVEVADQLRGVAWLKQQPW----VDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDW----- 639 (741)
T ss_dssp HHHHTTTTCTTTHHHHHHHHHHHHHHTSTT----EEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCG-----
T ss_pred hhhHHHhhhcccccHHHHHHHHHHHHhcCC----CChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcch-----
Confidence 21 1 1123444444444444311 12468999999999999999999999999999999984210
Q ss_pred cCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhc
Q 017180 212 FGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTG 291 (376)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (376)
. . +. ...... +. . ...+..+.+...
T Consensus 640 -------~--------~----------~~-----~~~~~~-~~----~----~~~~~~~~~~~~---------------- 664 (741)
T 2ecf_A 640 -------G--------L----------YD-----SHYTER-YM----D----LPARNDAGYREA---------------- 664 (741)
T ss_dssp -------G--------G----------SB-----HHHHHH-HH----C----CTGGGHHHHHHH----------------
T ss_pred -------h--------h----------hc-----cccchh-hc----C----CcccChhhhhhc----------------
Confidence 0 0 00 000000 00 0 000000000000
Q ss_pred cCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc----CCceEEEeCCC-CCCCCCChHHHHHHHHH
Q 017180 292 LLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK----GVTKFVEVPGA-LLPQEEYPAMVAQELYQ 366 (376)
Q Consensus 292 ~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~-H~~~~e~pe~~~~~i~~ 366 (376)
. ....+.++ ++|+|+++|++|..++.+..+.+.+.. .++++++++++ |..+.+.++++.+.|.+
T Consensus 665 --~-------~~~~~~~i--~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~ 733 (741)
T 2ecf_A 665 --R-------VLTHIEGL--RSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYRVAEA 733 (741)
T ss_dssp --C-------SGGGGGGC--CSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHHHHHHHHHH
T ss_pred --C-------HHHHHhhC--CCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCchhHHHHHHHH
Confidence 0 11235667 899999999999999988777775443 34699999998 99988888999999999
Q ss_pred HHHhhcCC
Q 017180 367 FLQQTFEP 374 (376)
Q Consensus 367 fl~~~~~~ 374 (376)
||++.+.+
T Consensus 734 fl~~~l~~ 741 (741)
T 2ecf_A 734 FLGRCLKP 741 (741)
T ss_dssp HHHHHHCC
T ss_pred HHHHhcCC
Confidence 99987653
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.2e-20 Score=167.21 Aligned_cols=227 Identities=14% Similarity=0.082 Sum_probs=131.5
Q ss_pred CCcEEEecCCCCC---ccchHhHHHHHHHH-hhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCC--
Q 017180 90 SKNILMIPTISDV---STVEEWRLVAQDIV-QRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSP-- 163 (376)
Q Consensus 90 ~~~vvllHG~~~~---~~~~~~~~~~~~L~-~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~-- 163 (376)
.|+|||+||.+.. .....|..++..|+ +. ||.|+++|+||+|.+..+ ...++..+.+..+.+... .
T Consensus 83 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~----g~~vv~~d~rg~~~~~~~---~~~~d~~~~~~~l~~~~~-~~~ 154 (338)
T 2o7r_A 83 LPLVVYFHGGGFILFSAASTIFHDFCCEMAVHA----GVVIASVDYRLAPEHRLP---AAYDDAMEALQWIKDSRD-EWL 154 (338)
T ss_dssp EEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHH----TCEEEEEECCCTTTTCTT---HHHHHHHHHHHHHHTCCC-HHH
T ss_pred ceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHC----CcEEEEecCCCCCCCCCc---hHHHHHHHHHHHHHhCCc-chh
Confidence 6789999997622 12334888899998 55 899999999999876532 223444444444443311 0
Q ss_pred -CCCCCCcEEEEecchHHHHHHHHHHhCCC--------CcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCch
Q 017180 164 -VSSSESDLVIFGGGHAATLTVRAAKKNLV--------KPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGV 234 (376)
Q Consensus 164 -~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~--------~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (376)
.....++++|+|||+||.+++.+|.++|+ +++++|+++|........ .. ... ....+..
T Consensus 155 ~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~--------~~---~~~-~~~~~~~ 222 (338)
T 2o7r_A 155 TNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRT--------GS---ELR-LANDSRL 222 (338)
T ss_dssp HHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCC--------HH---HHH-TTTCSSS
T ss_pred hccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCC--------hh---hhc-cCCCccc
Confidence 00013689999999999999999999887 899999999853211000 00 000 0000000
Q ss_pred hhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHH--HHHHHHhcccCC
Q 017180 235 GWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE--EFLQLFADLEGK 312 (376)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~ 312 (376)
. ..... .+.......+.... . ....+..... ...+.+..+ .
T Consensus 223 ~----------~~~~~--------------------~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~l~~~--~ 265 (338)
T 2o7r_A 223 P----------TFVLD--------------------LIWELSLPMGADRD-H----EYCNPTAESEPLYSFDKIRSL--G 265 (338)
T ss_dssp C----------HHHHH--------------------HHHHHHSCTTCCTT-S----TTTCCC----CCTHHHHHHHH--T
T ss_pred C----------HHHHH--------------------HHHHHhCCCCCCCC-C----cccCCCCCCcccccHhhhcCC--C
Confidence 0 00111 00000000000000 0 0000000000 011344556 7
Q ss_pred CcEEEEEeCCCCCCCHH--HHHHHhcccCCceEEEeCCC-CCCCCCCh---HHHHHHHHHHHHhhcC
Q 017180 313 LPLLVVSTEGSPRRSKA--EMEALKGAKGVTKFVEVPGA-LLPQEEYP---AMVAQELYQFLQQTFE 373 (376)
Q Consensus 313 ~Pvlii~G~~D~~~~~~--~~~~~~~~~~~~~~~~~~~~-H~~~~e~p---e~~~~~i~~fl~~~~~ 373 (376)
+|+|+++|++|..++.. ..+.+.+..+++++++++++ |..+.++| +++.+.|.+||.+...
T Consensus 266 ~P~Lvi~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~~ 332 (338)
T 2o7r_A 266 WRVMVVGCHGDPMIDRQMELAERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSCT 332 (338)
T ss_dssp CEEEEEEETTSTTHHHHHHHHHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC----
T ss_pred CCEEEEECCCCcchHHHHHHHHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhcc
Confidence 89999999999988743 35556666678999999999 99888777 8899999999987654
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.9e-21 Score=161.35 Aligned_cols=192 Identities=9% Similarity=0.053 Sum_probs=132.1
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcc---eEEEEeCCCCCcCCC----------CCC---------CCC-CH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVN---WRATIVDWPGLGYSD----------RPK---------MDY-NA 146 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~---~~Vi~~D~~G~G~S~----------~~~---------~~~-~~ 146 (376)
++||||+||++ ++...|..+++.|.+. + ++|+.+|++++|.+. .|. ..| ++
T Consensus 4 ~~pvv~iHG~~--~~~~~~~~~~~~L~~~----~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~ 77 (250)
T 3lp5_A 4 MAPVIMVPGSS--ASQNRFDSLITELGKE----TPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANI 77 (250)
T ss_dssp CCCEEEECCCG--GGHHHHHHHHHHHHHH----SSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHH
T ss_pred CCCEEEECCCC--CCHHHHHHHHHHHHhc----CCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCH
Confidence 67899999999 9999999999999985 4 789998888888631 121 111 56
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhC-----CCCcceEEEeccCCCCCCCcccCCCCchhhh
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN-----LVKPTAIAAVAPTWAGPLPIVFGRDSSMETR 221 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~ 221 (376)
+.+++++.++++.+...+ ..+++++|||||||.+++.++.++ |++|+++|++++...+...
T Consensus 78 ~~~a~~l~~~~~~l~~~~--~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~------------ 143 (250)
T 3lp5_A 78 DKQAVWLNTAFKALVKTY--HFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMEST------------ 143 (250)
T ss_dssp HHHHHHHHHHHHHHHTTS--CCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCC------------
T ss_pred HHHHHHHHHHHHHHHHHc--CCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccc------------
Confidence 677888887777663221 267899999999999999999977 6789999999874322100
Q ss_pred hHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHH
Q 017180 222 YGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREE 301 (376)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (376)
.+ .. .....+.+
T Consensus 144 ---------~~-------~~---~~~~~~~l------------------------------------------------- 155 (250)
T 3lp5_A 144 ---------ST-------TA---KTSMFKEL------------------------------------------------- 155 (250)
T ss_dssp ---------CS-------SC---CCHHHHHH-------------------------------------------------
T ss_pred ---------cc-------cc---cCHHHHHH-------------------------------------------------
Confidence 00 00 00011100
Q ss_pred HHHHHhcccCCCcEEEEEeC----CCCCCCHHHHHHHhcccCC----ceEEEeC--CC-CCCCCCChHHHHHHHHHHHHh
Q 017180 302 FLQLFADLEGKLPLLVVSTE----GSPRRSKAEMEALKGAKGV----TKFVEVP--GA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 302 ~~~~~~~i~~~~Pvlii~G~----~D~~~~~~~~~~~~~~~~~----~~~~~~~--~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
......++.++|+++|+|+ .|.++|.+..+.++...++ .+.+.+. ++ |..+.++| ++.+.|.+||.+
T Consensus 156 -~~~~~~lp~~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~-~v~~~I~~FL~~ 233 (250)
T 3lp5_A 156 -YRYRTGLPESLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNK-QIVSLIRQYLLA 233 (250)
T ss_dssp -HHTGGGSCTTCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHH-HHHHHHHHHTSC
T ss_pred -HhccccCCCCceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCchhcchhCH-HHHHHHHHHHhc
Confidence 0001111116799999999 8999999888765544332 2233443 57 99999998 799999999976
Q ss_pred h
Q 017180 371 T 371 (376)
Q Consensus 371 ~ 371 (376)
.
T Consensus 234 ~ 234 (250)
T 3lp5_A 234 E 234 (250)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-19 Score=155.12 Aligned_cols=202 Identities=11% Similarity=0.032 Sum_probs=122.5
Q ss_pred EeecCCceeEEEEecccCCCCCCCcEEEecCCCCCcc--chHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCC--
Q 017180 68 WKFKENSINIYYEKHERESPDPSKNILMIPTISDVST--VEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMD-- 143 (376)
Q Consensus 68 ~~~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~--~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~-- 143 (376)
+.+..||.+|....+-+....+.|.||++||++ .+ ...+..+++.|+++ ||.|+++|+||||.|......
T Consensus 34 ~~~~~dG~~i~g~l~~P~~~~~~p~Vl~~HG~g--~~~~~~~~~~~a~~la~~----Gy~Vl~~D~rG~G~s~~~~~~~~ 107 (259)
T 4ao6_A 34 FSLEVDGRTVPGVYWSPAEGSSDRLVLLGHGGT--THKKVEYIEQVAKLLVGR----GISAMAIDGPGHGERASVQAGRE 107 (259)
T ss_dssp EEEEETTEEEEEEEEEESSSCCSEEEEEEC----------CHHHHHHHHHHHT----TEEEEEECCCC------------
T ss_pred EEEeeCCeEEEEEEEeCCCCCCCCEEEEeCCCc--ccccchHHHHHHHHHHHC----CCeEEeeccCCCCCCCCcccccc
Confidence 334556888876555433333367788889999 65 44677888999997 999999999999998632210
Q ss_pred -------C----------CHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCC
Q 017180 144 -------Y----------NADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAG 206 (376)
Q Consensus 144 -------~----------~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~ 206 (376)
. .......|....++.+... ....++.++|+|+||.+++.++...|. +++.|+..+...
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~--~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~~~- 183 (259)
T 4ao6_A 108 PTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAE--EGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMGVE- 183 (259)
T ss_dssp -CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--HCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCCTT-
T ss_pred cchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--cCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEeccccc-
Confidence 0 0111122222222222100 026789999999999999999998874 566555433100
Q ss_pred CCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhH
Q 017180 207 PLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPA 286 (376)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (376)
.. . .
T Consensus 184 ----------------------------------~~-~-~---------------------------------------- 187 (259)
T 4ao6_A 184 ----------------------------------GV-N-G---------------------------------------- 187 (259)
T ss_dssp ----------------------------------ST-T-H----------------------------------------
T ss_pred ----------------------------------cc-c-c----------------------------------------
Confidence 00 0 0
Q ss_pred HHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc--CCceEEEeCCCCCCCCCChHHHHHHH
Q 017180 287 AFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK--GVTKFVEVPGALLPQEEYPAMVAQEL 364 (376)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~e~pe~~~~~i 364 (376)
....+..++| ++|+|+++|++|..+|.+..+.+.+.. ++.++++++++|... ..++..+.+
T Consensus 188 -------------~~~~~~a~~i--~~P~Li~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~~G~H~~~--p~~e~~~~~ 250 (259)
T 4ao6_A 188 -------------EDLVRLAPQV--TCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNPGKHSAV--PTWEMFAGT 250 (259)
T ss_dssp -------------HHHHHHGGGC--CSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEESSCTTCC--CHHHHTHHH
T ss_pred -------------cchhhhhccC--CCCEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEeCCCCCCc--CHHHHHHHH
Confidence 0023345667 899999999999999999999886554 456788888885421 224577888
Q ss_pred HHHHHhhc
Q 017180 365 YQFLQQTF 372 (376)
Q Consensus 365 ~~fl~~~~ 372 (376)
.+||++.+
T Consensus 251 ~~fl~~hL 258 (259)
T 4ao6_A 251 VDYLDQRL 258 (259)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 89999875
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.85 E-value=4.6e-21 Score=170.72 Aligned_cols=223 Identities=7% Similarity=-0.024 Sum_probs=145.0
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+++|+|+||++ ++...|..++..|.. +|+|+++|+||||.+..+ ..+++.+++++.+.+..+. ..+
T Consensus 101 ~~~l~~lhg~~--~~~~~~~~l~~~L~~-----~~~v~~~d~~g~~~~~~~--~~~~~~~a~~~~~~i~~~~-----~~~ 166 (329)
T 3tej_A 101 GPTLFCFHPAS--GFAWQFSVLSRYLDP-----QWSIIGIQSPRPNGPMQT--AANLDEVCEAHLATLLEQQ-----PHG 166 (329)
T ss_dssp SCEEEEECCTT--SCCGGGGGGGGTSCT-----TCEEEEECCCTTTSHHHH--CSSHHHHHHHHHHHHHHHC-----SSS
T ss_pred CCcEEEEeCCc--ccchHHHHHHHhcCC-----CCeEEEeeCCCCCCCCCC--CCCHHHHHHHHHHHHHHhC-----CCC
Confidence 78999999999 999999999999976 899999999999987632 3578999999887777653 257
Q ss_pred cEEEEecchHHHHHHHHHHh---CCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccH
Q 017180 170 DLVIFGGGHAATLTVRAAKK---NLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNE 246 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~---~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (376)
+++|+||||||.+|+.+|.+ +|++|.+++++++.... .... .......+.. . ....+ .
T Consensus 167 ~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~----~~~~-------~~~~~~~~~~----~-~~~~~---~ 227 (329)
T 3tej_A 167 PYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPE----TQNW-------QEKEANGLDP----E-VLAEI---N 227 (329)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTH----HHHT-------C-----CCCC----T-HHHHH---H
T ss_pred CEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCC----cccc-------ccccccccCh----h-hHHHH---H
Confidence 89999999999999999998 99999999999874210 0000 0000000000 0 00000 0
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCC
Q 017180 247 KAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRR 326 (376)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~ 326 (376)
.....+.. ... ....++..+.+...... ....+... ....+ .+|++++.|++|...
T Consensus 228 ~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~------~~~~~~~~------------~~~~~--~~pv~l~~~~~d~~~ 283 (329)
T 3tej_A 228 REREAFLA-AQQ---GSTSTELFTTIEGNYAD------AVRLLTTA------------HSVPF--DGKATLFVAERTLQE 283 (329)
T ss_dssp HHHHHHHH-TTC---CCSCCHHHHHHHHHHHH------HHHHHTTC------------CCCCE--EEEEEEEEEGGGCCT
T ss_pred HHHHHHHH-hcc---ccccHHHHHHHHHHHHH------HHHHHhcC------------CCCCc--CCCeEEEEeccCCCC
Confidence 01110111 111 11222333222221110 00000000 02245 889999999999887
Q ss_pred CHHHHHHHhcccCCceEEEeCCCCCCCCCCh--HHHHHHHHHHHH
Q 017180 327 SKAEMEALKGAKGVTKFVEVPGALLPQEEYP--AMVAQELYQFLQ 369 (376)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~p--e~~~~~i~~fl~ 369 (376)
+.+....+....++++++.++++|+.+.+.| +.+++.|.+||.
T Consensus 284 ~~~~~~~w~~~~~~~~~~~v~g~H~~~~~~~~~~~ia~~l~~~L~ 328 (329)
T 3tej_A 284 GMSPERAWSPWIAELDIYRQDCAHVDIISPGTFEKIGPIIRATLN 328 (329)
T ss_dssp TCCHHHHHTTTEEEEEEEEESSCGGGGGSTTTHHHHHHHHHHHHC
T ss_pred CCCchhhHHHhcCCcEEEEecCChHHhCCChHHHHHHHHHHHHhc
Confidence 7666667777778899999997798777776 789999999885
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.1e-22 Score=172.73 Aligned_cols=196 Identities=12% Similarity=0.007 Sum_probs=127.0
Q ss_pred CCcEEEecCCCC-CccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCC--CCCCCCCCHHHHHHHHHHHHh---CCCCC
Q 017180 90 SKNILMIPTISD-VSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYS--DRPKMDYNADVMEKFVVDLIN---APDSP 163 (376)
Q Consensus 90 ~~~vvllHG~~~-~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S--~~~~~~~~~~~~~~~l~~~l~---~l~~~ 163 (376)
.|+|||+||.+. .++...|..++..|++. ||.|+++|+||+|.+ ..+ ...++..+.+..+.+ .++
T Consensus 50 ~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~----G~~v~~~d~~g~~~~~~~~~---~~~~d~~~~~~~l~~~~~~~~-- 120 (283)
T 3bjr_A 50 LPAIIIVPGGSYTHIPVAQAESLAMAFAGH----GYQAFYLEYTLLTDQQPLGL---APVLDLGRAVNLLRQHAAEWH-- 120 (283)
T ss_dssp EEEEEEECCSTTTCCCHHHHHHHHHHHHTT----TCEEEEEECCCTTTCSSCBT---HHHHHHHHHHHHHHHSHHHHT--
T ss_pred CcEEEEECCCccccCCccccHHHHHHHHhC----CcEEEEEeccCCCccccCch---hHHHHHHHHHHHHHHHHHHhC--
Confidence 688999999431 14567789999999986 999999999999987 322 122222222222222 212
Q ss_pred CCCCCCcEEEEecchHHHHHHHHHHhCCCC-------------cceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 164 VSSSESDLVIFGGGHAATLTVRAAKKNLVK-------------PTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 164 ~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~-------------v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
...++++|+||||||.+++.+|.++|++ ++++|+++|.......
T Consensus 121 --~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~--------------------- 177 (283)
T 3bjr_A 121 --IDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLG--------------------- 177 (283)
T ss_dssp --EEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSB---------------------
T ss_pred --CCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccccccc---------------------
Confidence 1135899999999999999999999976 8999999884210000
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhccc
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLE 310 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 310 (376)
+. ..... +. ..+. . .. ..+ ....+.++
T Consensus 178 --------~~---~~~~~----~~-~~~~---------------------~---~~-----~~~-------~~~~~~~~- 204 (283)
T 3bjr_A 178 --------FP---KDDAT----LA-TWTP---------------------T---PN-----ELA-------ADQHVNSD- 204 (283)
T ss_dssp --------C----------------CCCC---------------------C---GG-----GGC-------GGGSCCTT-
T ss_pred --------cc---cccch----HH-HHHH---------------------H---hH-----hcC-------HHHhccCC-
Confidence 00 00000 00 0000 0 00 000 11123445
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHhccc----CCceEEEeCCC-CCCCCCCh-------------HHHHHHHHHHHHhh
Q 017180 311 GKLPLLVVSTEGSPRRSKAEMEALKGAK----GVTKFVEVPGA-LLPQEEYP-------------AMVAQELYQFLQQT 371 (376)
Q Consensus 311 ~~~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~-H~~~~e~p-------------e~~~~~i~~fl~~~ 371 (376)
.+|+|+++|++|.+++.+..+.+.+.. .++++++++++ |....+.+ +++.+.+.+||++.
T Consensus 205 -~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 205 -NQPTFIWTTADDPIVPATNTLAYATALATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp -CCCEEEEEESCCTTSCTHHHHHHHHHHHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred -CCCEEEEEcCCCCCCChHHHHHHHHHHHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 889999999999999987777665443 35699999998 97665554 67899999999864
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=9.4e-20 Score=154.62 Aligned_cols=185 Identities=14% Similarity=0.143 Sum_probs=130.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhh-hCCcceEEEEeCCCCCcCC-----------------C-CCCCCCCHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQR-VGKVNWRATIVDWPGLGYS-----------------D-RPKMDYNADVME 150 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~-~~~~~~~Vi~~D~~G~G~S-----------------~-~~~~~~~~~~~~ 150 (376)
.|+|||+||++ ++...|..++..|.+. ....+++|+++|.|+++.+ . .+....+.++..
T Consensus 23 ~p~vv~lHG~g--~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 100 (239)
T 3u0v_A 23 SASLIFLHGSG--DSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVMC 100 (239)
T ss_dssp CEEEEEECCTT--CCHHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHHHHH
T ss_pred CcEEEEEecCC--CchhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHHHHH
Confidence 67899999999 9999999999998863 1112699999888754211 1 122334677778
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
+++.+++++... .....++++|+||||||.+++.+|.++|++++++|+++|....
T Consensus 101 ~~l~~~~~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~------------------------ 155 (239)
T 3u0v_A 101 QVLTDLIDEEVK-SGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNK------------------------ 155 (239)
T ss_dssp HHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCT------------------------
T ss_pred HHHHHHHHHHHH-hCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCc------------------------
Confidence 888888776210 0013678999999999999999999999999999999883200
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhccc
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLE 310 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 310 (376)
. ..... . +. ....
T Consensus 156 -~-------------~~~~~-~-------------------------------------------------~~--~~~~- 168 (239)
T 3u0v_A 156 -A-------------SAVYQ-A-------------------------------------------------LQ--KSNG- 168 (239)
T ss_dssp -T-------------CHHHH-H-------------------------------------------------HH--HCCS-
T ss_pred -h-------------hHHHH-H-------------------------------------------------HH--hhcc-
Confidence 0 00000 0 00 0111
Q ss_pred CCCc-EEEEEeCCCCCCCHHHHHHHhcc----cCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 311 GKLP-LLVVSTEGSPRRSKAEMEALKGA----KGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 311 ~~~P-vlii~G~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
.+| +++++|++|.+++.+..+.+.+. ..++++++++++ |... ++..+.+.+||.+.+.
T Consensus 169 -~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~----~~~~~~~~~~l~~~l~ 232 (239)
T 3u0v_A 169 -VLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELS----KTELDILKLWILTKLP 232 (239)
T ss_dssp -CCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCC----HHHHHHHHHHHHHHCC
T ss_pred -CCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC----HHHHHHHHHHHHHhCC
Confidence 567 99999999999998776665433 447899999998 9987 4456777788887764
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.5e-20 Score=158.12 Aligned_cols=202 Identities=13% Similarity=0.086 Sum_probs=131.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceE----EEEeCCCCCc------C----CCCC-------CCCCCHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWR----ATIVDWPGLG------Y----SDRP-------KMDYNADV 148 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~----Vi~~D~~G~G------~----S~~~-------~~~~~~~~ 148 (376)
++||||+||++ ++...|..+++.|.+. ++ |+++|..++| . +..+ ...++.+.
T Consensus 3 ~~pvvllHG~~--~~~~~~~~l~~~L~~~-----~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 75 (254)
T 3ds8_A 3 QIPIILIHGSG--GNASSLDKMADQLMNE-----YRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDD 75 (254)
T ss_dssp CCCEEEECCTT--CCTTTTHHHHHHHHHT-----TCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHH
T ss_pred CCCEEEECCCC--CCcchHHHHHHHHHHh-----cCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHH
Confidence 67899999999 9999999999999984 43 3443333332 2 2233 34578899
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCC-----CcceEEEeccCCCCCCCcccCCCCchhhhhH
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV-----KPTAIAAVAPTWAGPLPIVFGRDSSMETRYG 223 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~-----~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~ 223 (376)
+++++.++++.+.... ..+++++|||||||.+++.++.++|+ +|+++|++++...+...
T Consensus 76 ~a~~l~~~i~~l~~~~--~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~-------------- 139 (254)
T 3ds8_A 76 WSKWLKIAMEDLKSRY--GFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDP-------------- 139 (254)
T ss_dssp HHHHHHHHHHHHHHHH--CCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCH--------------
T ss_pred HHHHHHHHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccc--------------
Confidence 9999955554432110 15789999999999999999999998 89999999885321100
Q ss_pred HHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHH
Q 017180 224 LLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFL 303 (376)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (376)
.. .................. . +.
T Consensus 140 ---------------~~------------~~~~~~~~~~p~~~~~~~----------------~--------------~~ 162 (254)
T 3ds8_A 140 ---------------ND------------NGMDLSFKKLPNSTPQMD----------------Y--------------FI 162 (254)
T ss_dssp ---------------HH------------HCSCTTCSSCSSCCHHHH----------------H--------------HH
T ss_pred ---------------cc------------cccccccccCCcchHHHH----------------H--------------HH
Confidence 00 000000000000000000 0 11
Q ss_pred HHHhcccCCCcEEEEEeC------CCCCCCHHHHHHHhcccCC----ceEEEeCC--C-CCCCCCChHHHHHHHHHHHHh
Q 017180 304 QLFADLEGKLPLLVVSTE------GSPRRSKAEMEALKGAKGV----TKFVEVPG--A-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 304 ~~~~~i~~~~Pvlii~G~------~D~~~~~~~~~~~~~~~~~----~~~~~~~~--~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+....++.++|++.|+|+ .|.+||.+..+.++...++ .+.+++.+ + |..+.++|+ +.+.|..||.+
T Consensus 163 ~~~~~~~~~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~-v~~~i~~fL~~ 241 (254)
T 3ds8_A 163 KNQTEVSPDLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPK-SIEKTYWFLEK 241 (254)
T ss_dssp HTGGGSCTTCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHH-HHHHHHHHHHT
T ss_pred HHHhhCCCCcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhcccCCHH-HHHHHHHHHHH
Confidence 112222226799999999 9999999999888655443 33445555 7 999999996 99999999998
Q ss_pred hc
Q 017180 371 TF 372 (376)
Q Consensus 371 ~~ 372 (376)
..
T Consensus 242 ~~ 243 (254)
T 3ds8_A 242 FK 243 (254)
T ss_dssp CC
T ss_pred hc
Confidence 64
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-20 Score=166.94 Aligned_cols=218 Identities=13% Similarity=0.031 Sum_probs=131.2
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHH-hhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIV-QRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~-~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
.|+||++||++.. ++...|..+...|+ +. ||.|+++|+||+|+|..+....+.....+++.+.+++++ ..
T Consensus 79 ~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~----g~~Vv~~dyrg~g~~~~p~~~~d~~~~~~~l~~~~~~~~----~d 150 (311)
T 1jji_A 79 SPVLVYYHGGGFVICSIESHDALCRRIARLS----NSTVVSVDYRLAPEHKFPAAVYDCYDATKWVAENAEELR----ID 150 (311)
T ss_dssp EEEEEEECCSTTTSCCTGGGHHHHHHHHHHH----TSEEEEEECCCTTTSCTTHHHHHHHHHHHHHHHTHHHHT----EE
T ss_pred ceEEEEECCcccccCChhHhHHHHHHHHHHh----CCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhHHHhC----CC
Confidence 6789999997722 35677888899998 44 899999999999999755332333344444444444444 11
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCC----cceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhh
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVK----PTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLV 243 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~----v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (376)
..+++|+|||+||.+++.+|.+++++ ++++|+++|....... .... ........
T Consensus 151 ~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~--------~~~~----~~~~~~~~---------- 208 (311)
T 1jji_A 151 PSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAP--------TPSL----LEFGEGLW---------- 208 (311)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSC--------CHHH----HHTSSSCS----------
T ss_pred chhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCC--------CccH----HHhcCCCc----------
Confidence 34899999999999999999877665 9999999985311100 0000 00000000
Q ss_pred ccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCC
Q 017180 244 SNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGS 323 (376)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D 323 (376)
..+......+......... .. ......+ +...+.. -.|+++++|++|
T Consensus 209 -------------------~~~~~~~~~~~~~~~~~~~-~~----~~~~~~p------~~~~l~~---~~P~li~~G~~D 255 (311)
T 1jji_A 209 -------------------ILDQKIMSWFSEQYFSREE-DK----FNPLASV------IFADLEN---LPPALIITAEYD 255 (311)
T ss_dssp -------------------SCCHHHHHHHHHHHCSSGG-GG----GCTTTSG------GGSCCTT---CCCEEEEEEEEC
T ss_pred -------------------cCCHHHHHHHHHHhCCCCc-cC----CCcccCc------ccccccC---CChheEEEcCcC
Confidence 0111111111111100000 00 0000000 0011222 359999999999
Q ss_pred CCCCHH--HHHHHhcccCCceEEEeCCC-CCCCC-----CChHHHHHHHHHHHHh
Q 017180 324 PRRSKA--EMEALKGAKGVTKFVEVPGA-LLPQE-----EYPAMVAQELYQFLQQ 370 (376)
Q Consensus 324 ~~~~~~--~~~~~~~~~~~~~~~~~~~~-H~~~~-----e~pe~~~~~i~~fl~~ 370 (376)
.+++.. ..+.+.+...++++++++++ |.... +..+++.+.+.+||++
T Consensus 256 ~l~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 256 PLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp TTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 988632 44566667778999999998 97654 3457889999999975
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-19 Score=175.99 Aligned_cols=230 Identities=11% Similarity=0.076 Sum_probs=150.0
Q ss_pred CceeEEEEecccCC-------CCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCC---CcCCCCC--
Q 017180 73 NSINIYYEKHERES-------PDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPG---LGYSDRP-- 140 (376)
Q Consensus 73 ~g~~l~y~~~g~~~-------~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G---~G~S~~~-- 140 (376)
+|.++++....+.+ .++.|+||++||++.......|..++..|+++ ||.|+++|+|| ||.|...
T Consensus 400 dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~----G~~v~~~d~rG~~~~G~~~~~~~ 475 (662)
T 3azo_A 400 DGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSR----GIGVADVNYGGSTGYGRAYRERL 475 (662)
T ss_dssp TSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTT----TCEEEEEECTTCSSSCHHHHHTT
T ss_pred CCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhC----CCEEEEECCCCCCCccHHHHHhh
Confidence 57777666654332 12357899999998333334788888999887 99999999999 8877421
Q ss_pred C---CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCc
Q 017180 141 K---MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSS 217 (376)
Q Consensus 141 ~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~ 217 (376)
. .....+++.+.+..++++.. ...++++|+|||+||.+++.++.. |++++++|+++|...
T Consensus 476 ~~~~~~~~~~d~~~~~~~l~~~~~----~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~------------ 538 (662)
T 3azo_A 476 RGRWGVVDVEDCAAVATALAEEGT----ADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLD------------ 538 (662)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHTTS----SCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCC------------
T ss_pred ccccccccHHHHHHHHHHHHHcCC----cChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccC------------
Confidence 1 13446777777888877732 136789999999999999998886 999999999987420
Q ss_pred hhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCC
Q 017180 218 METRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVN 297 (376)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (376)
+. ..... ...... ...+... +... ++..+.+.. . .
T Consensus 539 ~~---~~~~~--~~~~~~----------~~~~~~~-----~~~~----~~~~~~~~~----------------~--s--- 573 (662)
T 3azo_A 539 LL---GWADG--GTHDFE----------SRYLDFL-----IGSF----EEFPERYRD----------------R--A--- 573 (662)
T ss_dssp HH---HHHTT--CSCGGG----------TTHHHHH-----TCCT----TTCHHHHHH----------------T--C---
T ss_pred HH---HHhcc--cccchh----------hHhHHHH-----hCCC----ccchhHHHh----------------h--C---
Confidence 00 00000 000000 0011100 0000 000111100 0 0
Q ss_pred cHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC----CceEEEeCCC-CCC-CCCChHHHHHHHHHHHHhh
Q 017180 298 SREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG----VTKFVEVPGA-LLP-QEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 298 ~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~-H~~-~~e~pe~~~~~i~~fl~~~ 371 (376)
....+.++ ++|+|+++|++|..++.+..+.+.+.++ ++++++++++ |.. ..++++++.+.+.+||.+.
T Consensus 574 ----p~~~~~~~--~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 647 (662)
T 3azo_A 574 ----PLTRADRV--RVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQV 647 (662)
T ss_dssp ----GGGGGGGC--CSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred ----hHhHhccC--CCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 11235667 8999999999999999888887765544 4589999998 986 4467789999999999988
Q ss_pred cCC
Q 017180 372 FEP 374 (376)
Q Consensus 372 ~~~ 374 (376)
++.
T Consensus 648 l~~ 650 (662)
T 3azo_A 648 FGV 650 (662)
T ss_dssp TTC
T ss_pred hCC
Confidence 653
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.83 E-value=8.8e-20 Score=162.22 Aligned_cols=222 Identities=12% Similarity=-0.000 Sum_probs=128.8
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHh-hhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHh---CCCCCC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQ-RVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLIN---APDSPV 164 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~-~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~---~l~~~~ 164 (376)
.|+||++||++.. ++...|..++..|++ . ||.|+++|+||+|++..+.. .++..+.+..+.+ .++
T Consensus 79 ~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~----G~~Vv~~d~rg~~~~~~~~~---~~d~~~~~~~l~~~~~~~~--- 148 (323)
T 1lzl_A 79 VPVLLWIHGGGFAIGTAESSDPFCVEVAREL----GFAVANVEYRLAPETTFPGP---VNDCYAALLYIHAHAEELG--- 148 (323)
T ss_dssp EEEEEEECCSTTTSCCGGGGHHHHHHHHHHH----CCEEEEECCCCTTTSCTTHH---HHHHHHHHHHHHHTHHHHT---
T ss_pred CcEEEEECCCccccCChhhhHHHHHHHHHhc----CcEEEEecCCCCCCCCCCch---HHHHHHHHHHHHhhHHHcC---
Confidence 6789999997632 456678888888886 4 89999999999999875422 2333333333332 333
Q ss_pred CCCCCcEEEEecchHHHHHHHHHHhCCC----CcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhh
Q 017180 165 SSSESDLVIFGGGHAATLTVRAAKKNLV----KPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYN 240 (376)
Q Consensus 165 ~~~~~~~~lvG~S~Gg~ia~~~a~~~p~----~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (376)
...++++|+|||+||.+++.+|.++++ .++++|+++|....... ... .......+
T Consensus 149 -~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~--------~~~----~~~~~~~~-------- 207 (323)
T 1lzl_A 149 -IDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLE--------TVS----MTNFVDTP-------- 207 (323)
T ss_dssp -EEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCC--------SHH----HHHCSSCS--------
T ss_pred -CChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcC--------chh----HHHhccCC--------
Confidence 113689999999999999999987654 59999999985311100 000 00000000
Q ss_pred hhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHH-hcccCCCcEEEEE
Q 017180 241 MLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLF-ADLEGKLPLLVVS 319 (376)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~Pvlii~ 319 (376)
..+......+............ ........ ..... ..+...+|+++++
T Consensus 208 ----------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-----~sp~~~~~~~~~~P~li~~ 256 (323)
T 1lzl_A 208 ----------------------LWHRPNAILSWKYYLGESYSGP----EDPDVSIY-----AAPSRATDLTGLPPTYLST 256 (323)
T ss_dssp ----------------------SCCHHHHHHHHHHHHCTTCCCT----TCSCCCTT-----TCGGGCSCCTTCCCEEEEE
T ss_pred ----------------------CCCHHHHHHHHHHhCCCCcccc----cccCCCcc-----cCcccCcccCCCChhheEE
Confidence 0111111111111000000000 00000000 00000 1121136999999
Q ss_pred eCCCCCCC--HHHHHHHhcccCCceEEEeCCC-CCCC----CCChHHHHHHHHHHHHhhcC
Q 017180 320 TEGSPRRS--KAEMEALKGAKGVTKFVEVPGA-LLPQ----EEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 320 G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~-H~~~----~e~pe~~~~~i~~fl~~~~~ 373 (376)
|++|.+++ ....+.+.+...++++++++++ |... .+.++++.+.+.+||++.+.
T Consensus 257 G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~ 317 (323)
T 1lzl_A 257 MELDPLRDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLR 317 (323)
T ss_dssp ETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTC
T ss_pred CCcCCchHHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhc
Confidence 99999875 2344555566678999999998 9743 23467899999999998765
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=4.1e-19 Score=154.24 Aligned_cols=120 Identities=14% Similarity=0.103 Sum_probs=85.3
Q ss_pred ceeEEEEecccCC--CCCCCcEEEecCCCCCccchHhHH---HHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-CC----
Q 017180 74 SINIYYEKHERES--PDPSKNILMIPTISDVSTVEEWRL---VAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-MD---- 143 (376)
Q Consensus 74 g~~l~y~~~g~~~--~~~~~~vvllHG~~~~~~~~~~~~---~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~---- 143 (376)
|.++.+...-+.. .++.|+||++||++ .+...|.. +...+.+. ||.|+++|+||+|.|.... ..
T Consensus 26 g~~~~~~v~~P~~~~~~~~p~vv~lHG~~--~~~~~~~~~~~~~~~~~~~----g~~vv~~d~~g~G~s~~~~~~~~~~g 99 (278)
T 3e4d_A 26 KSEMTFAVYVPPKAIHEPCPVVWYLSGLT--CTHANVMEKGEYRRMASEL----GLVVVCPDTSPRGNDVPDELTNWQMG 99 (278)
T ss_dssp TEEEEEEEEECGGGGTSCEEEEEEECCTT--CCSHHHHHHSCCHHHHHHH----TCEEEECCSSCCSTTSCCCTTCTTSB
T ss_pred CCcceEEEEcCCCCCCCCCCEEEEEcCCC--CCccchhhcccHHHHHhhC----CeEEEecCCcccCccccccccccccc
Confidence 4445444433221 22257899999999 88888876 45555555 8999999999999886322 11
Q ss_pred -----------------CC-HHHHHHHHHHHHhCC-CCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 144 -----------------YN-ADVMEKFVVDLINAP-DSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 144 -----------------~~-~~~~~~~l~~~l~~l-~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
+. .+..++++.+++++. + ...++++|+||||||.+++.+|.++|++++++++++|.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 174 (278)
T 3e4d_A 100 KGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFR----ADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPI 174 (278)
T ss_dssp TTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSC----EEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCC
T ss_pred CCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcC----CCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCc
Confidence 11 223345666666654 3 11278999999999999999999999999999999984
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-20 Score=165.43 Aligned_cols=235 Identities=11% Similarity=0.031 Sum_probs=133.8
Q ss_pred eEEEEecccCC-CCCCCcEEEecC---CCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH
Q 017180 76 NIYYEKHERES-PDPSKNILMIPT---ISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK 151 (376)
Q Consensus 76 ~l~y~~~g~~~-~~~~~~vvllHG---~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 151 (376)
++.+....+.. .++.|+||++|| ++ ++...|..++..|++.. ||.|+++|+||+|.+..+. ..++..+
T Consensus 59 ~l~~~~~~P~~~~~~~p~vv~~HGGg~~~--g~~~~~~~~~~~la~~~---g~~v~~~d~rg~~~~~~~~---~~~d~~~ 130 (310)
T 2hm7_A 59 TLKVRMYRPEGVEPPYPALVYYHGGSWVV--GDLETHDPVCRVLAKDG---RAVVFSVDYRLAPEHKFPA---AVEDAYD 130 (310)
T ss_dssp EEEEEEEECTTCCSSEEEEEEECCSTTTS--CCTTTTHHHHHHHHHHH---TSEEEEECCCCTTTSCTTH---HHHHHHH
T ss_pred eEEEEEEecCCCCCCCCEEEEECCCcccc--CChhHhHHHHHHHHHhc---CCEEEEeCCCCCCCCCCCc---cHHHHHH
Confidence 55444443322 222678999999 66 78888999999998731 7999999999999876431 2233333
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCC----CcceEEEeccCCCCCCCcccCCCCchhhhhHHHHh
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV----KPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRG 227 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~----~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (376)
.+..+.+... ......++++|+|||+||.+++.+|.++|+ +++++|+++|..... +. . .... ...
T Consensus 131 ~~~~l~~~~~-~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~-~~---~--~~~~----~~~ 199 (310)
T 2hm7_A 131 ALQWIAERAA-DFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYD-PA---H--PPAS----IEE 199 (310)
T ss_dssp HHHHHHHTTG-GGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCC-TT---S--CCHH----HHH
T ss_pred HHHHHHhhHH-HhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCC-cc---c--CCcc----hhh
Confidence 3333333321 000124689999999999999999997765 699999999853211 00 0 0000 000
Q ss_pred hhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHh
Q 017180 228 TLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFA 307 (376)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (376)
..... ..+......+......... .. ......+. ....+.
T Consensus 200 ~~~~~------------------------------~~~~~~~~~~~~~~~~~~~-~~----~~~~~~p~-----~~~~l~ 239 (310)
T 2hm7_A 200 NAEGY------------------------------LLTGGMMLWFRDQYLNSLE-EL----THPWFSPV-----LYPDLS 239 (310)
T ss_dssp TSSSS------------------------------SSCHHHHHHHHHHHCSSGG-GG----GCTTTCGG-----GCSCCT
T ss_pred cCCCC------------------------------CCCHHHHHHHHHHhCCCCC-cc----CCccCCCC-----cCcccc
Confidence 00000 0111111111111100000 00 00000000 000122
Q ss_pred cccCCCcEEEEEeCCCCCCC--HHHHHHHhcccCCceEEEeCCC-CCCC-----CCChHHHHHHHHHHHHhhc
Q 017180 308 DLEGKLPLLVVSTEGSPRRS--KAEMEALKGAKGVTKFVEVPGA-LLPQ-----EEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 308 ~i~~~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~-H~~~-----~e~pe~~~~~i~~fl~~~~ 372 (376)
.+ .|+++++|++|.+++ ....+.+.+...++++++++++ |... .+.++++.+.+.+||++.+
T Consensus 240 ~~---~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 309 (310)
T 2hm7_A 240 GL---PPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 309 (310)
T ss_dssp TC---CCEEEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred CC---CCEEEEEecCCCchHHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHh
Confidence 33 399999999999872 2233444555567899999998 9643 3567899999999998865
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5e-19 Score=157.21 Aligned_cols=230 Identities=13% Similarity=0.096 Sum_probs=139.6
Q ss_pred CceeEEEEecccCCCCCCCc-EEEecCCC-CCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKN-ILMIPTIS-DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVME 150 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~-vvllHG~~-~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 150 (376)
+|+++ |...+.+. +++ ||++||.+ ..++...|..++..|++. .||.|+++|+|+++++..+ ...++..
T Consensus 66 ~g~~~-~~p~~~~~---~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~---~g~~v~~~dyr~~~~~~~~---~~~~d~~ 135 (322)
T 3k6k_A 66 GGVPC-IRQATDGA---GAAHILYFHGGGYISGSPSTHLVLTTQLAKQ---SSATLWSLDYRLAPENPFP---AAVDDCV 135 (322)
T ss_dssp TTEEE-EEEECTTC---CSCEEEEECCSTTTSCCHHHHHHHHHHHHHH---HTCEEEEECCCCTTTSCTT---HHHHHHH
T ss_pred CCEeE-EecCCCCC---CCeEEEEEcCCcccCCChHHHHHHHHHHHHh---cCCEEEEeeCCCCCCCCCc---hHHHHHH
Confidence 47888 66555433 667 99999955 125677888888888753 1799999999999876533 3455666
Q ss_pred HHHHHHHhC-CCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCC----cceEEEeccCCCCCCCcccCCCCchhhhhHHH
Q 017180 151 KFVVDLINA-PDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVK----PTAIAAVAPTWAGPLPIVFGRDSSMETRYGLL 225 (376)
Q Consensus 151 ~~l~~~l~~-l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~----v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~ 225 (376)
+.+..+++. + ..++++|+|||+||.+|+.+|.+.+++ ++++|+++|....... ... ..
T Consensus 136 ~a~~~l~~~~~------~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~--------~~~---~~ 198 (322)
T 3k6k_A 136 AAYRALLKTAG------SADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLS--------RWS---NS 198 (322)
T ss_dssp HHHHHHHHHHS------SGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCC--------SHH---HH
T ss_pred HHHHHHHHcCC------CCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccC--------ccc---hh
Confidence 666666655 3 267899999999999999999976655 9999999985311100 000 00
Q ss_pred HhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHH
Q 017180 226 RGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQL 305 (376)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (376)
......+ ..+.+....+........... +.. ....
T Consensus 199 ~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~----------~~~-----~sp~ 233 (322)
T 3k6k_A 199 NLADRDF------------------------------LAEPDTLGEMSELYVGGEDRK----------NPL-----ISPV 233 (322)
T ss_dssp HTGGGCS------------------------------SSCHHHHHHHHHHHHTTSCTT----------CTT-----TCGG
T ss_pred hccCCCC------------------------------cCCHHHHHHHHHHhcCCCCCC----------CCc-----CCcc
Confidence 0000000 011111111111111000000 000 0001
Q ss_pred HhcccCCCcEEEEEeCCCCCCCH--HHHHHHhcccCCceEEEeCCC-CCCC-----CCChHHHHHHHHHHHHhhcCC
Q 017180 306 FADLEGKLPLLVVSTEGSPRRSK--AEMEALKGAKGVTKFVEVPGA-LLPQ-----EEYPAMVAQELYQFLQQTFEP 374 (376)
Q Consensus 306 ~~~i~~~~Pvlii~G~~D~~~~~--~~~~~~~~~~~~~~~~~~~~~-H~~~-----~e~pe~~~~~i~~fl~~~~~~ 374 (376)
...+...+|+||++|++|.+++. ...+.+.+...++++++++++ |... .+.++++.+.|.+||.+.++.
T Consensus 234 ~~~~~~~pP~li~~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 310 (322)
T 3k6k_A 234 YADLSGLPEMLIHVGSEEALLSDSTTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARISK 310 (322)
T ss_dssp GSCCTTCCCEEEEEESSCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC-
T ss_pred cccccCCCcEEEEECCcCccHHHHHHHHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHHhc
Confidence 11111146999999999988531 233445555667899999999 9754 355788999999999987643
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-20 Score=158.74 Aligned_cols=187 Identities=9% Similarity=-0.045 Sum_probs=128.4
Q ss_pred eEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCc---CC--CC----CCCCCCH
Q 017180 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLG---YS--DR----PKMDYNA 146 (376)
Q Consensus 76 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G---~S--~~----~~~~~~~ 146 (376)
.++|...++..+ ++|+|||+||++ ++...|..+...|.+ +|+|+++|.|++. .+ +. +....+.
T Consensus 17 ~l~~~~~~~~~~-~~p~vv~lHG~g--~~~~~~~~~~~~l~~-----~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~ 88 (223)
T 3b5e_A 17 AFPYRLLGAGKE-SRECLFLLHGSG--VDETTLVPLARRIAP-----TATLVAARGRIPQEDGFRWFERIDPTRFEQKSI 88 (223)
T ss_dssp SSCEEEESTTSS-CCCEEEEECCTT--BCTTTTHHHHHHHCT-----TSEEEEECCSEEETTEEESSCEEETTEECHHHH
T ss_pred CceEEEeCCCCC-CCCEEEEEecCC--CCHHHHHHHHHhcCC-----CceEEEeCCCCCcCCccccccccCCCcccHHHH
Confidence 445555543221 168899999999 888999999999987 8999999988742 11 10 0111234
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHH
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLR 226 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 226 (376)
...++++.++++.+........++++|+|||+||.+++.+|.++|++++++|+++|....
T Consensus 89 ~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~-------------------- 148 (223)
T 3b5e_A 89 LAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVL-------------------- 148 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCC--------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCc--------------------
Confidence 445566666665541100012578999999999999999999999999999999883100
Q ss_pred hhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHH
Q 017180 227 GTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLF 306 (376)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (376)
... . ..
T Consensus 149 -----------------~~~--------------------------------~-------------------------~~ 154 (223)
T 3b5e_A 149 -----------------DHV--------------------------------P-------------------------AT 154 (223)
T ss_dssp -----------------SSC--------------------------------C-------------------------CC
T ss_pred -----------------ccc--------------------------------c-------------------------cc
Confidence 000 0 00
Q ss_pred hcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC----CceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 307 ADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG----VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 307 ~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
..+ ++|+++++|++|.+++.+..+ +.+..+ ++++++++ + |....+ ..+.+.+||.+..
T Consensus 155 ~~~--~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~~----~~~~i~~~l~~~~ 217 (223)
T 3b5e_A 155 DLA--GIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIGDP----DAAIVRQWLAGPI 217 (223)
T ss_dssp CCT--TCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCCHH----HHHHHHHHHHCC-
T ss_pred ccc--CCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcCHH----HHHHHHHHHHhhh
Confidence 112 789999999999999988777 654433 68899999 7 998643 3457888988754
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=163.38 Aligned_cols=228 Identities=13% Similarity=0.025 Sum_probs=133.6
Q ss_pred CCcEEEecCCCCC-ccch--HhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC-CCCCCCHHHHHHHHHHHH---hCCCC
Q 017180 90 SKNILMIPTISDV-STVE--EWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR-PKMDYNADVMEKFVVDLI---NAPDS 162 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~--~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~-~~~~~~~~~~~~~l~~~l---~~l~~ 162 (376)
.|+||++||.+.. ++.. .|..+...|++. ||.|+++|+||+|.|+. .......++..+.+..+. ++++
T Consensus 109 ~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~----g~~vv~~d~r~~gg~~~~~~~~~~~~D~~~~~~~v~~~~~~~~- 183 (361)
T 1jkm_A 109 LPGLVYTHGGGMTILTTDNRVHRRWCTDLAAA----GSVVVMVDFRNAWTAEGHHPFPSGVEDCLAAVLWVDEHRESLG- 183 (361)
T ss_dssp EEEEEEECCSTTTSSCSSSHHHHHHHHHHHHT----TCEEEEEECCCSEETTEECCTTHHHHHHHHHHHHHHHTHHHHT-
T ss_pred CeEEEEEcCCccccCCCcccchhHHHHHHHhC----CCEEEEEecCCCCCCCCCCCCCccHHHHHHHHHHHHhhHHhcC-
Confidence 5789999996522 3445 788889999875 99999999999976652 112223344433333333 3334
Q ss_pred CCCCCCCcEEEEecchHHHHHHHHHHh-----CCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhH
Q 017180 163 PVSSSESDLVIFGGGHAATLTVRAAKK-----NLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWM 237 (376)
Q Consensus 163 ~~~~~~~~~~lvG~S~Gg~ia~~~a~~-----~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (376)
.++++|+|||+||.+++.++.. +|++++++|+++|......... ....
T Consensus 184 -----~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~------~~~~---------------- 236 (361)
T 1jkm_A 184 -----LSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWD------HERR---------------- 236 (361)
T ss_dssp -----EEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSC------HHHH----------------
T ss_pred -----CCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccccccccc------cccc----------------
Confidence 4489999999999999999997 8889999999998532110000 0000
Q ss_pred HhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEE
Q 017180 238 MYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLV 317 (376)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvli 317 (376)
... ...... . ............+............ . ....+ .......+.++ . |+|+
T Consensus 237 --~~~--~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~p---~~~~~~~l~~l--~-P~Li 293 (361)
T 1jkm_A 237 --LTE--LPSLVE-----N---DGYFIENGGMALLVRAYDPTGEHAE-D----PIAWP---YFASEDELRGL--P-PFVV 293 (361)
T ss_dssp --HHH--CTHHHH-----T---TTSSSCHHHHHHHHHHHSSSSTTTT-C----TTTCG---GGCCHHHHTTC--C-CEEE
T ss_pred --ccc--Ccchhh-----c---cCcccCHHHHHHHHHHhCCCCCCCC-C----cccCc---cccChhhHcCC--C-ceEE
Confidence 000 000000 0 0011222222222222111100000 0 00000 00013345666 5 9999
Q ss_pred EEeCCCCCCCH--HHHHHHhcccCCceEEEeCCC-CCCC-C-----CCh-HHHHHHHHHHHHhhc
Q 017180 318 VSTEGSPRRSK--AEMEALKGAKGVTKFVEVPGA-LLPQ-E-----EYP-AMVAQELYQFLQQTF 372 (376)
Q Consensus 318 i~G~~D~~~~~--~~~~~~~~~~~~~~~~~~~~~-H~~~-~-----e~p-e~~~~~i~~fl~~~~ 372 (376)
++|++|.+++. +..+.+.+...++++++++++ |..+ . +.+ +++.+.|.+||++..
T Consensus 294 i~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 294 AVNELDPLRDEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp EEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCcCcchhhHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 99999998872 233444455567899999998 9876 3 444 888999999998763
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.1e-19 Score=152.21 Aligned_cols=107 Identities=8% Similarity=0.046 Sum_probs=81.1
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcce--EEEEeCCCCCcCCC----------CCC--------CCCCHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNW--RATIVDWPGLGYSD----------RPK--------MDYNADVM 149 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~--~Vi~~D~~G~G~S~----------~~~--------~~~~~~~~ 149 (376)
++||||+||++ ++...|+.+++.|.+. |+ +|+.+|.+++|.+. .|. ...+..++
T Consensus 6 ~~pvvliHG~~--~~~~~~~~l~~~L~~~----g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~ 79 (249)
T 3fle_A 6 TTATLFLHGYG--GSERSETFMVKQALNK----NVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKEN 79 (249)
T ss_dssp CEEEEEECCTT--CCGGGTHHHHHHHHTT----TSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHH
T ss_pred CCcEEEECCCC--CChhHHHHHHHHHHHc----CCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHH
Confidence 57899999999 9999999999999986 64 79999999999752 110 12344455
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCC-----CcceEEEeccCC
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV-----KPTAIAAVAPTW 204 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~-----~v~~lvl~~p~~ 204 (376)
++++.++++.+.... ..+++++|||||||.+++.++.++|. +|+++|++++..
T Consensus 80 ~~~l~~~i~~l~~~~--~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~ 137 (249)
T 3fle_A 80 AYWIKEVLSQLKSQF--GIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVY 137 (249)
T ss_dssp HHHHHHHHHHHHHTT--CCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCT
T ss_pred HHHHHHHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCcc
Confidence 555555554431110 16789999999999999999998874 799999998754
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.6e-20 Score=152.58 Aligned_cols=189 Identities=12% Similarity=0.119 Sum_probs=128.9
Q ss_pred EEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC----C--CCCCCHHHHHHH
Q 017180 79 YEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR----P--KMDYNADVMEKF 152 (376)
Q Consensus 79 y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~----~--~~~~~~~~~~~~ 152 (376)
+...|.+..+.+++|||+||+| ++...|..+++.|... ++.|+++|.+|++.-+. + ......++..+.
T Consensus 11 ~~~~g~P~~~a~~~Vv~lHG~G--~~~~~~~~l~~~l~~~----~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~ 84 (210)
T 4h0c_A 11 IITSGVPVQRAKKAVVMLHGRG--GTAADIISLQKVLKLD----EMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALAL 84 (210)
T ss_dssp EEEEESCTTTCSEEEEEECCTT--CCHHHHHGGGGTSSCT----TEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHH
T ss_pred ceeCCCCcccCCcEEEEEeCCC--CCHHHHHHHHHHhCCC----CeEEEeecCCCCCccccccCCCcccchHHHHHHHHH
Confidence 4455665544477899999999 8888898888888765 89999999999874321 1 112334444455
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
+..+++.+... ....++++|+|+|+||.+++.++.++|+++.++|.+++.....
T Consensus 85 i~~~~~~~~~~-~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~------------------------- 138 (210)
T 4h0c_A 85 VGEVVAEIEAQ-GIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQ------------------------- 138 (210)
T ss_dssp HHHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSS-------------------------
T ss_pred HHHHHHHHHHh-CCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCCh-------------------------
Confidence 55554433110 1235789999999999999999999999999999998631000
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCC
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGK 312 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 312 (376)
... ... . ..... +
T Consensus 139 -------~~~-----------~~~-~-----------------------------------------------~~~~~-~ 151 (210)
T 4h0c_A 139 -------ELA-----------IGN-Y-----------------------------------------------KGDFK-Q 151 (210)
T ss_dssp -------SCC-----------GGG-C-----------------------------------------------CBCCT-T
T ss_pred -------hhh-----------hhh-h-----------------------------------------------hhhcc-C
Confidence 000 000 0 00000 5
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHh----cccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 313 LPLLVVSTEGSPRRSKAEMEALK----GAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 313 ~Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+|++++||++|+++|.+..+++. +...+++++++|+. |.+. +++ .+.|.+||.|
T Consensus 152 ~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~---~~e-l~~i~~wL~k 210 (210)
T 4h0c_A 152 TPVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTIS---GDE-IQLVNNTILK 210 (210)
T ss_dssp CEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCC---HHH-HHHHHHTTTC
T ss_pred CceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcC---HHH-HHHHHHHHcC
Confidence 79999999999999998777653 34457899999997 9763 444 4668888764
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-18 Score=151.13 Aligned_cols=201 Identities=12% Similarity=0.077 Sum_probs=126.9
Q ss_pred CCcEEEecCCCCCccchHhHH---HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCC---------------------CC
Q 017180 90 SKNILMIPTISDVSTVEEWRL---VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMD---------------------YN 145 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~---~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~---------------------~~ 145 (376)
.|+||++||++ .+...|.. +...+.+. |+.|+++|.+|+|.+...... +.
T Consensus 47 ~p~vv~lHG~~--~~~~~~~~~~~~~~~~~~~----g~~vv~pd~~~~g~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~ 120 (280)
T 3i6y_A 47 VPVLYWLSGLT--CSDENFMQKAGAQRLAAEL----GIAIVAPDTSPRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQ 120 (280)
T ss_dssp EEEEEEECCTT--CCSSHHHHHSCCHHHHHHH----TCEEEEECSSCCSTTCCCCSSTTSSTTCCTTCBCCSTTGGGTCB
T ss_pred ccEEEEecCCC--CChhHHhhcccHHHHHhhC----CeEEEEeCCcccccccCcccccccccCccccccccCCCccchhh
Confidence 57899999999 87777866 44555555 899999999988765422110 01
Q ss_pred -HHHHHHHHHHHHhCCCCCCCCCC-CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhH
Q 017180 146 -ADVMEKFVVDLINAPDSPVSSSE-SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYG 223 (376)
Q Consensus 146 -~~~~~~~l~~~l~~l~~~~~~~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~ 223 (376)
.+...+++.+++++.. .. ++++|+|||+||.+|+.+|.++|++++++++++|....
T Consensus 121 ~~~~~~~~~~~~~~~~~-----~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~----------------- 178 (280)
T 3i6y_A 121 MYDYVVNELPELIESMF-----PVSDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINNP----------------- 178 (280)
T ss_dssp HHHHHHTHHHHHHHHHS-----SEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCCG-----------------
T ss_pred HHHHHHHHHHHHHHHhC-----CCCCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCcccc-----------------
Confidence 2334466777774432 12 78999999999999999999999999999999984210
Q ss_pred HHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHH
Q 017180 224 LLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFL 303 (376)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (376)
...+ .. ...+...+.. + ... . ...+..
T Consensus 179 -----~~~~------~~-----~~~~~~~~~~----~-----~~~----------------~------------~~~~~~ 205 (280)
T 3i6y_A 179 -----VNCP------WG-----QKAFTAYLGK----D-----TDT----------------W------------REYDAS 205 (280)
T ss_dssp -----GGSH------HH-----HHHHHHHHCS----C-----GGG----------------T------------GGGCHH
T ss_pred -----ccCc------hH-----HHHHHHhcCC----c-----hHH----------------H------------HhcCHH
Confidence 0000 00 0111111110 0 000 0 000022
Q ss_pred HHHhcccCCCcEEEEEeCCCCCCCH-----HHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 304 QLFADLEGKLPLLVVSTEGSPRRSK-----AEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 304 ~~~~~i~~~~Pvlii~G~~D~~~~~-----~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
..+.++...+|+++++|++|.+++. +..+.+.+...++++++++++ |.. .....+...+.+|+.+.+.
T Consensus 206 ~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~--~~~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 206 LLMRAAKQYVPALVDQGEADNFLAEQLKPEVLEAAASSNNYPLELRSHEGYDHSY--YFIASFIEDHLRFHSNYLN 279 (280)
T ss_dssp HHHHHCSSCCCEEEEEETTCTTHHHHTCHHHHHHHHHHTTCCEEEEEETTCCSSH--HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCccEEEEEeCCCccccchhhHHHHHHHHHHcCCCceEEEeCCCCccH--HHHHHhHHHHHHHHHhhcc
Confidence 2333441137999999999999876 334455555667899999998 974 2234566777788877654
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.81 E-value=3.2e-19 Score=158.25 Aligned_cols=211 Identities=17% Similarity=0.168 Sum_probs=139.1
Q ss_pred cEEEecC--CCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC---CCCCCCHHHHHHHHHHHHhCCCCCCCC
Q 017180 92 NILMIPT--ISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR---PKMDYNADVMEKFVVDLINAPDSPVSS 166 (376)
Q Consensus 92 ~vvllHG--~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~ 166 (376)
+|+|+|| ++ ++...|..++..|.. +++|+++|+||||.|+. .....+++++++++.+.++.+.
T Consensus 91 ~l~~~hg~g~~--~~~~~~~~l~~~L~~-----~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~----- 158 (319)
T 2hfk_A 91 VLVGCTGTAAN--GGPHEFLRLSTSFQE-----ERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAA----- 158 (319)
T ss_dssp EEEEECCCCTT--CSTTTTHHHHHTTTT-----TCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHH-----
T ss_pred cEEEeCCCCCC--CcHHHHHHHHHhcCC-----CCceEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHhc-----
Confidence 8999998 56 788899999998886 89999999999999821 2235789999999999888763
Q ss_pred CCCcEEEEecchHHHHHHHHHHhC----CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhh
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKN----LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNML 242 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~----p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (376)
..++++++||||||.+|+.+|.+. ++.|++++++++.... .. .. ...+ ...+
T Consensus 159 ~~~p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~-------~~---~~----~~~~----------~~~l 214 (319)
T 2hfk_A 159 GDAPVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPG-------HQ---EP----IEVW----------SRQL 214 (319)
T ss_dssp TTSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTT-------SC---HH----HHHT----------HHHH
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCC-------ch---hH----HHHH----------HHHh
Confidence 257899999999999999999875 5679999999874210 00 00 0000 0000
Q ss_pred hccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCC
Q 017180 243 VSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEG 322 (376)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~ 322 (376)
.... +.. .+. ........... .+...+.. . ....+ ++|+++++| +
T Consensus 215 --~~~~----~~~-~~~---~~~~~~~~~~~----------~~~~~~~~----------~--~~~~i--~~Pvl~i~g-~ 259 (319)
T 2hfk_A 215 --GEGL----FAG-ELE---PMSDARLLAMG----------RYARFLAG----------P--RPGRS--SAPVLLVRA-S 259 (319)
T ss_dssp --HHHH----HHT-CSS---CCCHHHHHHHH----------HHHHHHHS----------C--CCCCC--CSCEEEEEE-S
T ss_pred --hHHH----HHh-hcc---ccchHHHHHHH----------HHHHHHHh----------C--CCCCc--CCCEEEEEc-C
Confidence 0111 111 110 11111111000 00000000 0 12456 899999999 8
Q ss_pred CCCCCHHH-HHHHhcccC-CceEEEeCCCCCC-CCCChHHHHHHHHHHHHhhcC
Q 017180 323 SPRRSKAE-MEALKGAKG-VTKFVEVPGALLP-QEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 323 D~~~~~~~-~~~~~~~~~-~~~~~~~~~~H~~-~~e~pe~~~~~i~~fl~~~~~ 373 (376)
|..++.+. .+.+.+..+ +.+++.++++|+. +.++|+++++.|.+||.+...
T Consensus 260 D~~~~~~~~~~~~~~~~~~~~~~~~v~g~H~~~~~e~~~~~~~~i~~~L~~~~~ 313 (319)
T 2hfk_A 260 EPLGDWQEERGDWRAHWDLPHTVADVPGDHFTMMRDHAPAVAEAVLSWLDAIEG 313 (319)
T ss_dssp SCSSCCCGGGCCCSCCCSSCSEEEEESSCTTHHHHTCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCccccccchhhcCCCCCEEEEeCCCcHHHHHHhHHHHHHHHHHHHHhcCC
Confidence 98887654 445555544 5889999966985 447999999999999987653
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-19 Score=178.83 Aligned_cols=219 Identities=10% Similarity=0.063 Sum_probs=141.5
Q ss_pred CceeEEEEecccCC---CCCCCcEEEecCCCCCcc---chHh--HHHHHHHHhhhCCcceEEEEeCCCCCcCCC------
Q 017180 73 NSINIYYEKHERES---PDPSKNILMIPTISDVST---VEEW--RLVAQDIVQRVGKVNWRATIVDWPGLGYSD------ 138 (376)
Q Consensus 73 ~g~~l~y~~~g~~~---~~~~~~vvllHG~~~~~~---~~~~--~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~------ 138 (376)
+| ++.+...-+.. .++.|+||++||.+ .+ ...| ......|+++ ||.|+++|+||+|.+.
T Consensus 477 ~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~--~~~~~~~~~~~~~~~~~l~~~----G~~vv~~d~rG~g~~g~~~~~~ 549 (723)
T 1xfd_A 477 DY-NLPMQILKPATFTDTTHYPLLLVVDGTP--GSQSVAEKFEVSWETVMVSSH----GAVVVKCDGRGSGFQGTKLLHE 549 (723)
T ss_dssp TE-EECCBEEBCSSCCSSSCEEEEEECCCCT--TCCCCCCCCCCSHHHHHHHTT----CCEEECCCCTTCSSSHHHHHHT
T ss_pred Cc-eEEEEEEeCCCCCCCCccCEEEEEcCCC--CccccCccccccHHHHHhhcC----CEEEEEECCCCCccccHHHHHH
Confidence 45 66655544332 12257899999988 44 2233 2455667755 9999999999999852
Q ss_pred -CCC-CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhC----CCCcceEEEeccCCCCCCCccc
Q 017180 139 -RPK-MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN----LVKPTAIAAVAPTWAGPLPIVF 212 (376)
Q Consensus 139 -~~~-~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~----p~~v~~lvl~~p~~~~~~~~~~ 212 (376)
... .....+++.+.+..+.+... ....+++|+||||||.+++.+|.++ |++++++|+++|.... .
T Consensus 550 ~~~~~~~~~~~d~~~~~~~l~~~~~----~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~--~--- 620 (723)
T 1xfd_A 550 VRRRLGLLEEKDQMEAVRTMLKEQY----IDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDF--K--- 620 (723)
T ss_dssp TTTCTTTHHHHHHHHHHHHHHSSSS----EEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCT--T---
T ss_pred HHhccCcccHHHHHHHHHHHHhCCC----cChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcch--H---
Confidence 111 12344555555555444321 1246799999999999999999999 9999999999884210 0
Q ss_pred CCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhcc
Q 017180 213 GRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGL 292 (376)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (376)
... ...... +......... . +
T Consensus 621 --------------------~~~----------~~~~~~-~~~~~~~~~~---------------------~-------~ 641 (723)
T 1xfd_A 621 --------------------LYA----------SAFSER-YLGLHGLDNR---------------------A-------Y 641 (723)
T ss_dssp --------------------SSB----------HHHHHH-HHCCCSSCCS---------------------S-------T
T ss_pred --------------------Hhh----------hhccHh-hcCCccCChh---------------------H-------H
Confidence 000 000000 1100000000 0 0
Q ss_pred CCCCCcHHHHHHHHhcccCC-CcEEEEEeCCCCCCCHHHHHHHhcc----cCCceEEEeCCC-CCC-CCCChHHHHHHHH
Q 017180 293 LDPVNSREEFLQLFADLEGK-LPLLVVSTEGSPRRSKAEMEALKGA----KGVTKFVEVPGA-LLP-QEEYPAMVAQELY 365 (376)
Q Consensus 293 ~~~~~~~~~~~~~~~~i~~~-~Pvlii~G~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~-H~~-~~e~pe~~~~~i~ 365 (376)
.... ....+.++ + +|+|+++|++|..++.+..+.+.+. ..++++++++++ |.+ ..+.++++.+.+.
T Consensus 642 ~~~~-----~~~~~~~~--~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 714 (723)
T 1xfd_A 642 EMTK-----VAHRVSAL--EEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSII 714 (723)
T ss_dssp TTTC-----THHHHTSC--CSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHH
T ss_pred HhcC-----hhhHHhhc--CCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHH
Confidence 0000 23356677 7 8999999999999998877766543 367899999998 997 6788999999999
Q ss_pred HHHHhhcC
Q 017180 366 QFLQQTFE 373 (376)
Q Consensus 366 ~fl~~~~~ 373 (376)
+||.+.++
T Consensus 715 ~fl~~~l~ 722 (723)
T 1xfd_A 715 NFFVECFR 722 (723)
T ss_dssp HHHTTTTC
T ss_pred HHHHHHhc
Confidence 99998764
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.9e-19 Score=158.74 Aligned_cols=99 Identities=17% Similarity=0.175 Sum_probs=82.4
Q ss_pred CCcEEEecCCCCCccchH-hH-HHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEE-WR-LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~-~~-~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
+++|||+||++ ++... |. .+.+.|.+. ||+|+++|+||||.++.. .+.+++++.+..+++..+
T Consensus 31 ~~~VvllHG~~--~~~~~~~~~~l~~~L~~~----G~~v~~~d~~g~g~~~~~---~~~~~l~~~i~~~~~~~g------ 95 (317)
T 1tca_A 31 SKPILLVPGTG--TTGPQSFDSNWIPLSTQL----GYTPCWISPPPFMLNDTQ---VNTEYMVNAITALYAGSG------ 95 (317)
T ss_dssp SSEEEEECCTT--CCHHHHHTTTHHHHHHTT----TCEEEEECCTTTTCSCHH---HHHHHHHHHHHHHHHHTT------
T ss_pred CCeEEEECCCC--CCcchhhHHHHHHHHHhC----CCEEEEECCCCCCCCcHH---HHHHHHHHHHHHHHHHhC------
Confidence 67899999999 88876 88 889999886 999999999999987521 234566666777777665
Q ss_pred CCcEEEEecchHHHHHHHHHHhCC---CCcceEEEeccC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNL---VKPTAIAAVAPT 203 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p---~~v~~lvl~~p~ 203 (376)
.++++||||||||.+++.++..+| ++|+++|+++|.
T Consensus 96 ~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~ 134 (317)
T 1tca_A 96 NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPD 134 (317)
T ss_dssp SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCC
T ss_pred CCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCC
Confidence 578999999999999999988775 889999999984
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.3e-19 Score=155.38 Aligned_cols=106 Identities=6% Similarity=0.066 Sum_probs=83.9
Q ss_pred CCcEEEecCCCCCccc---hHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHHHHHHHHHhCCCCCC
Q 017180 90 SKNILMIPTISDVSTV---EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVMEKFVVDLINAPDSPV 164 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~---~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~~~l~~~l~~l~~~~ 164 (376)
++||||+||++ ++. ..|..+++.|.+... |++|+++|+ |||.|+.+. ...+..+.++++.+.++.+..
T Consensus 5 ~~pvVllHG~~--~~~~~~~~~~~~~~~L~~~~~--g~~v~~~d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~-- 77 (279)
T 1ei9_A 5 PLPLVIWHGMG--DSCCNPLSMGAIKKMVEKKIP--GIHVLSLEI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPK-- 77 (279)
T ss_dssp SCCEEEECCTT--CCSCCTTTTHHHHHHHHHHST--TCCEEECCC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGG--
T ss_pred CCcEEEECCCC--CCCCCcccHHHHHHHHHHHCC--CcEEEEEEe-CCCCccccccccccCHHHHHHHHHHHHHhhhh--
Confidence 56799999999 776 789999999987322 469999998 999886221 124677777777777776420
Q ss_pred CCCCCcEEEEecchHHHHHHHHHHhCCCC-cceEEEeccCC
Q 017180 165 SSSESDLVIFGGGHAATLTVRAAKKNLVK-PTAIAAVAPTW 204 (376)
Q Consensus 165 ~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~-v~~lvl~~p~~ 204 (376)
..+++++|||||||.++..++.++|+. |+++|++++..
T Consensus 78 --l~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 78 --LQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp --GTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred --ccCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCcc
Confidence 126899999999999999999999984 99999998643
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=6.2e-19 Score=150.15 Aligned_cols=198 Identities=11% Similarity=0.052 Sum_probs=128.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+++|||+||++ ++...|..++..|.+ +++|+++|+||++ ++++++.++++.+. ..+
T Consensus 22 ~~~l~~~hg~~--~~~~~~~~~~~~l~~-----~~~v~~~d~~g~~------------~~~~~~~~~i~~~~-----~~~ 77 (244)
T 2cb9_A 22 GKNLFCFPPIS--GFGIYFKDLALQLNH-----KAAVYGFHFIEED------------SRIEQYVSRITEIQ-----PEG 77 (244)
T ss_dssp SSEEEEECCTT--CCGGGGHHHHHHTTT-----TSEEEEECCCCST------------THHHHHHHHHHHHC-----SSS
T ss_pred CCCEEEECCCC--CCHHHHHHHHHHhCC-----CceEEEEcCCCHH------------HHHHHHHHHHHHhC-----CCC
Confidence 67899999999 999999999999987 8999999999974 24566667776653 246
Q ss_pred cEEEEecchHHHHHHHHHHhC---CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccH
Q 017180 170 DLVIFGGGHAATLTVRAAKKN---LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNE 246 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~---p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (376)
+++++||||||.+|+.+|.+. ++++.++|++++.... ...... . ....+ ...
T Consensus 78 ~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~--~~~~~~----~-~~~~~-------------~~~----- 132 (244)
T 2cb9_A 78 PYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKD--QSITAD----T-ENDDS-------------AAY----- 132 (244)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCC--SCCCCC-------------------------CC-----
T ss_pred CEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCc--cccccc----c-cHHHH-------------HHH-----
Confidence 899999999999999999864 5789999999874310 000000 0 00000 000
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeC--CCC
Q 017180 247 KAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTE--GSP 324 (376)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~--~D~ 324 (376)
+.+...+.+..... .+..+... ......+ ++|+++++|+ +|.
T Consensus 133 -----------------~~~~~~~~~~~~~~------~~~~~~~~-----------~~~~~~i--~~Pvl~i~g~~~~D~ 176 (244)
T 2cb9_A 133 -----------------LPEAVRETVMQKKR------CYQEYWAQ-----------LINEGRI--KSNIHFIEAGIQTET 176 (244)
T ss_dssp -----------------SCHHHHHHHTHHHH------HHHHHHHH-----------CCCCSCB--SSEEEEEECSBCSCC
T ss_pred -----------------hHHHHHHHHHHHHH------HHHHHHHh-----------hccCCCc--CCCEEEEEccCcccc
Confidence 00111000000000 00000000 0013456 8999999999 887
Q ss_pred CCCHHHHHHHhcccC-CceEEEeCCCC--CCCCCChHHHHHHHHHHHHhhcC
Q 017180 325 RRSKAEMEALKGAKG-VTKFVEVPGAL--LPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 325 ~~~~~~~~~~~~~~~-~~~~~~~~~~H--~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
++.+....+.+..+ +++++.++++| ++..++++++++.|.+||.+...
T Consensus 177 -~~~~~~~~w~~~~~~~~~~~~i~ggH~~~~~~~~~~~~~~~i~~~L~~~~~ 227 (244)
T 2cb9_A 177 -SGAMVLQKWQDAAEEGYAEYTGYGAHKDMLEGEFAEKNANIILNILDKINS 227 (244)
T ss_dssp -CHHHHTTSSGGGBSSCEEEEECSSBGGGTTSHHHHHHHHHHHHHHHHTC--
T ss_pred -ccccchhHHHHhcCCCCEEEEecCChHHHcChHHHHHHHHHHHHHHhcCcc
Confidence 44444445555544 68999999778 77778899999999999987543
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.80 E-value=4.4e-21 Score=169.08 Aligned_cols=203 Identities=11% Similarity=0.042 Sum_probs=127.7
Q ss_pred CCcEEEecCCCC-CccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHH---hCCCCCCC
Q 017180 90 SKNILMIPTISD-VSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLI---NAPDSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~-~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l---~~l~~~~~ 165 (376)
.|+|||+||.+. .++...|..++..|.++ ||.|+++|+||+|.+..+. ..++..+.+..+. +.++
T Consensus 82 ~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~----G~~v~~~d~r~~~~~~~~~---~~~d~~~~~~~l~~~~~~~~---- 150 (303)
T 4e15_A 82 APLFVFVHGGYWQEMDMSMSCSIVGPLVRR----GYRVAVMDYNLCPQVTLEQ---LMTQFTHFLNWIFDYTEMTK---- 150 (303)
T ss_dssp CCEEEEECCSTTTSCCGGGSCTTHHHHHHT----TCEEEEECCCCTTTSCHHH---HHHHHHHHHHHHHHHHHHTT----
T ss_pred CCEEEEECCCcCcCCChhHHHHHHHHHHhC----CCEEEEecCCCCCCCChhH---HHHHHHHHHHHHHHHhhhcC----
Confidence 789999999431 15667787888999887 9999999999998764221 1222222222222 3443
Q ss_pred CCCCcEEEEecchHHHHHHHHHHhCC-------CCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHH
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKKNL-------VKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMM 238 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~~p-------~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (376)
.++++|+|||+||.+++.++.+.+ ++++++|+++|.... . . .....
T Consensus 151 --~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~--~-------------~----~~~~~------ 203 (303)
T 4e15_A 151 --VSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDL--R-------------E----LSNLE------ 203 (303)
T ss_dssp --CSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCC--H-------------H----HHTCT------
T ss_pred --CCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeecc--H-------------h----hhccc------
Confidence 678999999999999999998654 279999999884210 0 0 00000
Q ss_pred hhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEE
Q 017180 239 YNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVV 318 (376)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii 318 (376)
... .. ..+. .+.+.. .. ....... +......+ .+|+|++
T Consensus 204 ~~~-----------~~-~~~~----~~~~~~------------~~-----~sp~~~~------~~~~~~~~--~~P~lii 242 (303)
T 4e15_A 204 SVN-----------PK-NILG----LNERNI------------ES-----VSPMLWE------YTDVTVWN--STKIYVV 242 (303)
T ss_dssp TTS-----------GG-GTTC----CCTTTT------------TT-----TCGGGCC------CCCGGGGT--TSEEEEE
T ss_pred ccc-----------hh-hhhc----CCHHHH------------HH-----cCchhhc------ccccccCC--CCCEEEE
Confidence 000 00 0000 000000 00 0000000 00000233 7899999
Q ss_pred EeCCCCCCCHHHHHHHhccc----CCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 319 STEGSPRRSKAEMEALKGAK----GVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 319 ~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
+|++|..++.+..+.+.+.. .++++++++++ |+.++|.+......|.+||.+.
T Consensus 243 ~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~ 300 (303)
T 4e15_A 243 AAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGYDHFDIIEETAIDDSDVSRFLRNI 300 (303)
T ss_dssp EEEESCHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTHHHHGGGSTTSHHHHHHHHH
T ss_pred EeCCCCCCchHHHHHHHHHHHHCCCceEEEEeCCCCchHHHHHHhCCCcHHHHHHHHh
Confidence 99999999888877775443 46799999999 9999999988888888888764
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=154.60 Aligned_cols=232 Identities=13% Similarity=0.012 Sum_probs=138.2
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK 151 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 151 (376)
+|.++..+...+.. ++.|+||++||.+.. ++...|..++..|+.. .||.|+++|+|+.+++..+ ...++..+
T Consensus 69 ~G~~i~~~~~~P~~-~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~---~g~~vv~~dyr~~p~~~~p---~~~~D~~~ 141 (317)
T 3qh4_A 69 AGRPVPVRIYRAAP-TPAPVVVYCHAGGFALGNLDTDHRQCLELARR---ARCAVVSVDYRLAPEHPYP---AALHDAIE 141 (317)
T ss_dssp TSCEEEEEEEECSC-SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHH---HTSEEEEECCCCTTTSCTT---HHHHHHHH
T ss_pred CCCeEEEEEEecCC-CCCcEEEEECCCcCccCChHHHHHHHHHHHHH---cCCEEEEecCCCCCCCCCc---hHHHHHHH
Confidence 35445444433221 226899999986622 3556678888888742 1899999999988765432 23344444
Q ss_pred HHHHHHhC---CCCCCCCCCCcEEEEecchHHHHHHHHHHhCCC----CcceEEEeccCCCCCCCcccCCCCchhhhhHH
Q 017180 152 FVVDLINA---PDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV----KPTAIAAVAPTWAGPLPIVFGRDSSMETRYGL 224 (376)
Q Consensus 152 ~l~~~l~~---l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~----~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (376)
.+..+.+. ++ ...++++|+|||+||.+++.+|.+.++ .+.++++++|..... . ...
T Consensus 142 a~~~l~~~~~~~~----~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~-~--------~~~---- 204 (317)
T 3qh4_A 142 VLTWVVGNATRLG----FDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR-P--------TAS---- 204 (317)
T ss_dssp HHHHHHHTHHHHT----EEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS-C--------CHH----
T ss_pred HHHHHHhhHHhhC----CCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC-C--------CcC----
Confidence 44444443 33 124589999999999999999986544 589999999853211 0 000
Q ss_pred HHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHH
Q 017180 225 LRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQ 304 (376)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (376)
.......+ .........+............. ..+. ...
T Consensus 205 ~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~-------~~p~-----~~~ 242 (317)
T 3qh4_A 205 RSEFRATP------------------------------AFDGEAASLMWRHYLAGQTPSPE-------SVPG-----RRG 242 (317)
T ss_dssp HHHTTTCS------------------------------SSCHHHHHHHHHHHHTTCCCCTT-------TCGG-----GCS
T ss_pred HHHhcCCC------------------------------CcCHHHHHHHHHHhcCCCCCCcc-------cCCC-----ccc
Confidence 00000000 01111111111111100000000 0000 000
Q ss_pred HHhcccCCCcEEEEEeCCCCCCC--HHHHHHHhcccCCceEEEeCCC-CC-----CCCCChHHHHHHHHHHHHhhcC
Q 017180 305 LFADLEGKLPLLVVSTEGSPRRS--KAEMEALKGAKGVTKFVEVPGA-LL-----PQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 305 ~~~~i~~~~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~-H~-----~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
.+.. -.|++|++|++|.+++ .+..+++.+...++++++++++ |. ...+.++++.+.+.+||++.++
T Consensus 243 ~l~~---lpP~li~~G~~D~~~~~~~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 243 QLAG---LPATLITCGEIDPFRDEVLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp CCTT---CCCEEEEEEEESTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred ccCC---CCceeEEecCcCCCchhHHHHHHHHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 1122 3599999999999987 5667777777788999999999 98 4567788999999999998765
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-18 Score=150.51 Aligned_cols=94 Identities=7% Similarity=0.091 Sum_probs=80.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+++|||+||++ ++...|..++..|. ++|+++|++|. ...++++++++++.++++.+. ..+
T Consensus 24 ~~~l~~~hg~~--~~~~~~~~~~~~L~-------~~v~~~d~~~~------~~~~~~~~~a~~~~~~i~~~~-----~~~ 83 (283)
T 3tjm_A 24 ERPLFLVHPIE--GSTTVFHSLASRLS-------IPTYGLQCTRA------APLDSIHSLAAYYIDCIRQVQ-----PEG 83 (283)
T ss_dssp SCCEEEECCTT--CCSGGGHHHHHHCS-------SCEEEECCCTT------SCCSCHHHHHHHHHHHHTTTC-----CSS
T ss_pred CCeEEEECCCC--CCHHHHHHHHHhcC-------ceEEEEecCCC------CCCCCHHHHHHHHHHHHHHhC-----CCC
Confidence 67899999999 99999988777663 78999999752 235789999999999999885 247
Q ss_pred cEEEEecchHHHHHHHHHHhC---CCCcc---eEEEeccC
Q 017180 170 DLVIFGGGHAATLTVRAAKKN---LVKPT---AIAAVAPT 203 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~---p~~v~---~lvl~~p~ 203 (376)
+++|+||||||.+|+.+|.+. |+++. +++++++.
T Consensus 84 ~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~ 123 (283)
T 3tjm_A 84 PYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 123 (283)
T ss_dssp CCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCC
T ss_pred CEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCC
Confidence 899999999999999999855 88898 99999863
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-17 Score=144.66 Aligned_cols=219 Identities=14% Similarity=0.085 Sum_probs=133.2
Q ss_pred CceeEEEEecccCC---CCCCCcEEEecCCCCCccchHhHH---HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC----
Q 017180 73 NSINIYYEKHERES---PDPSKNILMIPTISDVSTVEEWRL---VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM---- 142 (376)
Q Consensus 73 ~g~~l~y~~~g~~~---~~~~~~vvllHG~~~~~~~~~~~~---~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~---- 142 (376)
.|.++.+...-+.. .++.|+||++||++ .+...|.. +...+.+. |+.|+++|.+|+|.+.....
T Consensus 25 ~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~--~~~~~~~~~~~~~~~~~~~----g~~vv~~d~~~~g~~~~~~~~~~~ 98 (280)
T 3ls2_A 25 THCTMRFAVFLPPGASESNKVPVLYWLSGLT--CTDENFMQKAGAFKKAAEL----GIAIVAPDTSPRGDNVPNEDSYDF 98 (280)
T ss_dssp TTEEEEEEEEECTTCBTTBCEEEEEEECCTT--CCSHHHHHHSCCHHHHHHH----TCEEEECCSSCCSTTSCCCSCTTS
T ss_pred cCCceEEEEEcCCCCCCCCCcCEEEEeCCCC--CChhhhhcchhHHHHHhhC----CeEEEEeCCccccccccccccccc
Confidence 35555554443322 22357899999999 87777765 45566665 89999999997776532110
Q ss_pred -----------------CCC-HHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 143 -----------------DYN-ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 143 -----------------~~~-~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
... .+...+++..++++... ..++++|+||||||.+|+.+|.++|++++++++++|..
T Consensus 99 g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~ 174 (280)
T 3ls2_A 99 AQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFP----VTSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIV 174 (280)
T ss_dssp STTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSS----EEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCS
T ss_pred ccCCccccccccccccccccHHHHHHHHHHHHHHhhCC----CCCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCcc
Confidence 001 23344566666655320 13689999999999999999999999999999999842
Q ss_pred CCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCch
Q 017180 205 AGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYV 284 (376)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (376)
.. ...+ .. ...+...+.. ..+..
T Consensus 175 ~~----------------------~~~~------~~-----~~~~~~~~g~---------~~~~~--------------- 197 (280)
T 3ls2_A 175 NP----------------------INCP------WG-----VKAFTGYLGA---------DKTTW--------------- 197 (280)
T ss_dssp CG----------------------GGSH------HH-----HHHHHHHHCS---------CGGGT---------------
T ss_pred Cc----------------------ccCc------ch-----hhHHHhhcCc---------hHHHH---------------
Confidence 10 0000 00 0011111110 00000
Q ss_pred hHHHhhccCCCCCcHHHHHHHHhcccC--CCcEEEEEeCCCCCCCH-----HHHHHHhcccCCceEEEeCCC-CCCCCCC
Q 017180 285 PAAFLTGLLDPVNSREEFLQLFADLEG--KLPLLVVSTEGSPRRSK-----AEMEALKGAKGVTKFVEVPGA-LLPQEEY 356 (376)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~Pvlii~G~~D~~~~~-----~~~~~~~~~~~~~~~~~~~~~-H~~~~e~ 356 (376)
...+....+.++.. .+|+++++|++|.+++. +..+.+.+...++++++++++ |... .
T Consensus 198 -------------~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~--~ 262 (280)
T 3ls2_A 198 -------------AQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQNLVAVAKQKDYPLTLEMQTGYDHSYF--F 262 (280)
T ss_dssp -------------GGGCHHHHHHTCCGGGCCCEEEEEETTCTTCCCCCCHHHHHHHHHHHTCCEEEEEETTCCSSHH--H
T ss_pred -------------HhcCHHHHHHhccccCCCcEEEEEeCCCcccCCchhHHHHHHHHHHhCCCceEEEeCCCCCchh--h
Confidence 00001222333311 56999999999999885 445566666678999999998 9742 2
Q ss_pred hHHHHHHHHHHHHhhcC
Q 017180 357 PAMVAQELYQFLQQTFE 373 (376)
Q Consensus 357 pe~~~~~i~~fl~~~~~ 373 (376)
.......+.+|+.+.+.
T Consensus 263 ~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 263 ISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 34456667788887653
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=8.7e-19 Score=172.62 Aligned_cols=220 Identities=11% Similarity=0.040 Sum_probs=137.7
Q ss_pred ceeEEEEecccCC---CCCCCcEEEecCCCCCccch---HhH-HHHHHHH-hhhCCcceEEEEeCCCCCcCCCCCC----
Q 017180 74 SINIYYEKHERES---PDPSKNILMIPTISDVSTVE---EWR-LVAQDIV-QRVGKVNWRATIVDWPGLGYSDRPK---- 141 (376)
Q Consensus 74 g~~l~y~~~g~~~---~~~~~~vvllHG~~~~~~~~---~~~-~~~~~L~-~~~~~~~~~Vi~~D~~G~G~S~~~~---- 141 (376)
+.++++....+.. .++.|+||++||++ .+.. .|. .+...|. ++ ||.|+++|+||+|.|....
T Consensus 477 ~~~l~~~~~~P~~~~~~~~~p~vl~~hG~~--~~~~~~~~~~~~~~~~l~~~~----G~~v~~~d~rG~g~~~~~~~~~~ 550 (719)
T 1z68_A 477 EITLWYKMILPPQFDRSKKYPLLIQVYGGP--CSQSVRSVFAVNWISYLASKE----GMVIALVDGRGTAFQGDKLLYAV 550 (719)
T ss_dssp TEEEEEEEEECTTCCSSSCEEEEEEECCCT--TBCCCCCCCCCCHHHHHHHTT----CCEEEEEECTTBSSSCHHHHGGG
T ss_pred CeEEEEEEEeCCCCCCCCCccEEEEECCCC--CcCcccccchhhHHHHHHhcC----CeEEEEEcCCCCCCCchhhHHHH
Confidence 3677776654432 12246799999998 5432 332 2344453 44 9999999999999986321
Q ss_pred -CC---CCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCc
Q 017180 142 -MD---YNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSS 217 (376)
Q Consensus 142 -~~---~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~ 217 (376)
.. ...+++.+.+..+.+.. .....+++|+||||||.+++.+|.++|++++++|+++|.... ..
T Consensus 551 ~~~~~~~~~~d~~~~~~~l~~~~----~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~--~~------- 617 (719)
T 1z68_A 551 YRKLGVYEVEDQITAVRKFIEMG----FIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSW--EY------- 617 (719)
T ss_dssp TTCTTHHHHHHHHHHHHHHHTTS----CEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCT--TT-------
T ss_pred hhccCcccHHHHHHHHHHHHhcC----CCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccCh--HH-------
Confidence 11 12333333444444421 112468999999999999999999999999999999884210 00
Q ss_pred hhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCC
Q 017180 218 METRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVN 297 (376)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (376)
.. .......+ ..+.. .+..+.+.. . .
T Consensus 618 ----------------~~----------~~~~~~~~-----g~~~~--~~~~~~~~~----------------~--~--- 643 (719)
T 1z68_A 618 ----------------YA----------SVYTERFM-----GLPTK--DDNLEHYKN----------------S--T--- 643 (719)
T ss_dssp ----------------SB----------HHHHHHHH-----CCSST--TTTHHHHHH----------------T--C---
T ss_pred ----------------hc----------cccchhhc-----CCccc--ccchhhhhh----------------C--C---
Confidence 00 00000001 00000 000000000 0 0
Q ss_pred cHHHHHHHHhcccCCC-cEEEEEeCCCCCCCHHHHHHHhcc----cCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 298 SREEFLQLFADLEGKL-PLLVVSTEGSPRRSKAEMEALKGA----KGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 298 ~~~~~~~~~~~i~~~~-Pvlii~G~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
....+.++ ++ |+|+++|++|..++.+..+.+.+. ..++++++++++ |....+.++++.+.|.+||++.
T Consensus 644 ----~~~~~~~~--~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 717 (719)
T 1z68_A 644 ----VMARAEYF--RNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQC 717 (719)
T ss_dssp ----SGGGGGGG--TTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHHHHHHHHHHHHHHH
T ss_pred ----HhHHHhcC--CCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCCcccHHHHHHHHHHHHHHh
Confidence 11234556 66 899999999999998877766543 345789999998 9997778999999999999987
Q ss_pred c
Q 017180 372 F 372 (376)
Q Consensus 372 ~ 372 (376)
+
T Consensus 718 l 718 (719)
T 1z68_A 718 F 718 (719)
T ss_dssp H
T ss_pred h
Confidence 5
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.3e-18 Score=153.24 Aligned_cols=222 Identities=12% Similarity=0.031 Sum_probs=129.8
Q ss_pred CCcEEEecCCCC-CccchHhHHHHHHHHh-hhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISD-VSTVEEWRLVAQDIVQ-RVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~-~~~~~~~~~~~~~L~~-~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
+|+||++||.+. .++...|..++..|++ . ||.|+++|+|+.+....+ ...++..+.+..+.+... .....
T Consensus 87 ~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~----g~~V~~~dyr~~p~~~~~---~~~~D~~~a~~~l~~~~~-~~~~d 158 (326)
T 3ga7_A 87 QATLYYLHGGGFILGNLDTHDRIMRLLARYT----GCTVIGIDYSLSPQARYP---QAIEETVAVCSYFSQHAD-EYSLN 158 (326)
T ss_dssp SCEEEEECCSTTTSCCTTTTHHHHHHHHHHH----CSEEEEECCCCTTTSCTT---HHHHHHHHHHHHHHHTTT-TTTCC
T ss_pred CcEEEEECCCCcccCChhhhHHHHHHHHHHc----CCEEEEeeCCCCCCCCCC---cHHHHHHHHHHHHHHhHH-HhCCC
Confidence 588999999762 2556778888888887 5 899999999988765432 223444444444444321 11123
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCC------cceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhh
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVK------PTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNM 241 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~------v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (376)
.++++|+|+|+||.+++.+|.+++++ ++++++++|....... ... ......
T Consensus 159 ~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~---------~~~-----~~~~~~--------- 215 (326)
T 3ga7_A 159 VEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDS---------VSR-----RLFGGA--------- 215 (326)
T ss_dssp CSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCC---------HHH-----HHCCCT---------
T ss_pred hhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCC---------hhH-----hhhcCC---------
Confidence 57899999999999999999876654 8899998874210000 000 000000
Q ss_pred hhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeC
Q 017180 242 LVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTE 321 (376)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~ 321 (376)
....+.+....+........... ..+.... ....+.+. .+|+++++|+
T Consensus 216 -------------------~~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~--~~~~~~~~--~~P~li~~G~ 263 (326)
T 3ga7_A 216 -------------------WDGLTREDLDMYEKAYLRNDEDR---------ESPWYCL--FNNDLTRD--VPPCFIASAE 263 (326)
T ss_dssp -------------------TTTCCHHHHHHHHHHHCSSGGGG---------GCTTTSG--GGSCCSSC--CCCEEEEEET
T ss_pred -------------------CCCCCHHHHHHHHHHhCCCCCcc---------CCcccCC--CcchhhcC--CCCEEEEecC
Confidence 00111111111111111000000 0000000 01112223 6799999999
Q ss_pred CCCCCCH--HHHHHHhcccCCceEEEeCCC-CCCC-----CCChHHHHHHHHHHHHhhcCC
Q 017180 322 GSPRRSK--AEMEALKGAKGVTKFVEVPGA-LLPQ-----EEYPAMVAQELYQFLQQTFEP 374 (376)
Q Consensus 322 ~D~~~~~--~~~~~~~~~~~~~~~~~~~~~-H~~~-----~e~pe~~~~~i~~fl~~~~~~ 374 (376)
+|++++. ...+.+.+....+++++++++ |... .+..+++.+.+.+||.+.+..
T Consensus 264 ~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 264 FDPLIDDSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp TCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred cCcCHHHHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 9998852 223444555567899999999 9864 344688999999999987643
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=147.14 Aligned_cols=206 Identities=17% Similarity=0.116 Sum_probs=125.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+++|+|+||++ ++...|..++..|. .++|+++|+||+|. .++++.++++.+. ..+
T Consensus 17 ~~~l~~~hg~~--~~~~~~~~~~~~l~------~~~v~~~d~~g~~~------------~~~~~~~~i~~~~-----~~~ 71 (230)
T 1jmk_C 17 EQIIFAFPPVL--GYGLMYQNLSSRLP------SYKLCAFDFIEEED------------RLDRYADLIQKLQ-----PEG 71 (230)
T ss_dssp SEEEEEECCTT--CCGGGGHHHHHHCT------TEEEEEECCCCSTT------------HHHHHHHHHHHHC-----CSS
T ss_pred CCCEEEECCCC--CchHHHHHHHHhcC------CCeEEEecCCCHHH------------HHHHHHHHHHHhC-----CCC
Confidence 67899999999 99999998888775 39999999999873 3456666666664 246
Q ss_pred cEEEEecchHHHHHHHHHHhC---CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccH
Q 017180 170 DLVIFGGGHAATLTVRAAKKN---LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNE 246 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~---p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (376)
+++++||||||.+|+.+|.+. ++++.+++++++............ . ....+ .
T Consensus 72 ~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~-------------~-~~~~~-----------~ 126 (230)
T 1jmk_C 72 PLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGR-------------T-VESDV-----------E 126 (230)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC----------------------CCH-----------H
T ss_pred CeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccc-------------c-HHHHH-----------H
Confidence 799999999999999999864 467999999986421110000000 0 00000 0
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCC
Q 017180 247 KAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRR 326 (376)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~ 326 (376)
..+. ..... .....+.....+..... ....+... ......+ ++|+++++|++|..+
T Consensus 127 ~~~~---~~~~~--~~~~~~~~~~~~~~~~~------~~~~~~~~-----------~~~~~~~--~~P~l~i~g~~D~~~ 182 (230)
T 1jmk_C 127 ALMN---VNRDN--EALNSEAVKHGLKQKTH------AFYSYYVN-----------LISTGQV--KADIDLLTSGADFDI 182 (230)
T ss_dssp HHHH---HTTTC--SGGGSHHHHHHHHHHHH------HHHHHHHH-----------CCCCSCB--SSEEEEEECSSCCCC
T ss_pred HHHh---cChhh--hhhhhHHHHHHHHHHHH------HHHHHhhh-----------ccccccc--cccEEEEEeCCCCCC
Confidence 0000 00000 00011111111100000 00000000 0023456 899999999999988
Q ss_pred CHHHHHHHhccc-CCceEEEeCCCC--CCCCCChHHHHHHHHHHHHh
Q 017180 327 SKAEMEALKGAK-GVTKFVEVPGAL--LPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 327 ~~~~~~~~~~~~-~~~~~~~~~~~H--~~~~e~pe~~~~~i~~fl~~ 370 (376)
+ +....+.+.. ++++++.++++| ++..++++.+++.|.+||.+
T Consensus 183 ~-~~~~~w~~~~~~~~~~~~i~g~H~~~~~~~~~~~~~~~i~~~l~~ 228 (230)
T 1jmk_C 183 P-EWLASWEEATTGAYRMKRGFGTHAEMLQGETLDRNAGILLEFLNT 228 (230)
T ss_dssp C-TTEECSGGGBSSCEEEEECSSCGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred c-cccchHHHhcCCCeEEEEecCChHHHcCcHhHHHHHHHHHHHHhh
Confidence 7 2233344443 468899999779 88888999999999999975
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=150.42 Aligned_cols=236 Identities=8% Similarity=0.006 Sum_probs=127.5
Q ss_pred CCcEEEecCCCCC-ccchHh-HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDV-STVEEW-RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~-~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
+|+||++||.+.. ++...| ..+...+.+. ||+|+++|||+.+++ .+....+|+.++++.+.... ..
T Consensus 27 ~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~----g~~Vi~vdYrlaPe~-------~~p~~~~D~~~al~~l~~~~-~~ 94 (274)
T 2qru_A 27 TNYVVYLHGGGMIYGTKSDLPEELKELFTSN----GYTVLALDYLLAPNT-------KIDHILRTLTETFQLLNEEI-IQ 94 (274)
T ss_dssp CEEEEEECCSTTTSCCGGGCCHHHHHHHHTT----TEEEEEECCCCTTTS-------CHHHHHHHHHHHHHHHHHHT-TT
T ss_pred CcEEEEEeCccccCCChhhchHHHHHHHHHC----CCEEEEeCCCCCCCC-------CCcHHHHHHHHHHHHHHhcc-cc
Confidence 6889999997632 233334 5677777775 899999999986543 34445555555444332000 01
Q ss_pred CCcEEEEecchHHHHHHHHHH---hCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhc
Q 017180 168 ESDLVIFGGGHAATLTVRAAK---KNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVS 244 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~---~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (376)
.++++|+|+|+||.+|+.++. ..+.++++++++.|.....+.. ... ....+.........+
T Consensus 95 ~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~-~~~-------------~~~~~~~~~~~~~~~-- 158 (274)
T 2qru_A 95 NQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIK-EPR-------------KLLKQAISAKEIAAI-- 158 (274)
T ss_dssp TCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGG-SCC-------------CSCSSCCCSGGGTTS--
T ss_pred CCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccC-Cch-------------hhccccccHHHHhhh--
Confidence 568999999999999999987 4678899999987643210000 000 000000000000000
Q ss_pred cHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHH-HHHHhcccCCCcEEEEEeCCC
Q 017180 245 NEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEF-LQLFADLEGKLPLLVVSTEGS 323 (376)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~Pvlii~G~~D 323 (376)
........ ....... ..+... . ... .+. .+.............+ ...+.++ .|++|++|++|
T Consensus 159 --------~~~~~~~~-~~~~~~~-~~~~~~-~-~~~-~~~-~~~~~~~~~~~~~~~~~~~~l~~l---pP~li~~G~~D 221 (274)
T 2qru_A 159 --------DQTKPVWD-DPFLSRY-LLYHYS-I-QQA-LLP-HFYGLPENGDWSAYALSDETLKTF---PPCFSTASSSD 221 (274)
T ss_dssp --------CCSSCCSC-CTTCTTH-HHHHHH-H-HTT-CHH-HHHTCCTTSCCGGGCCCHHHHHTS---CCEEEEEETTC
T ss_pred --------cccCCCCC-Cccccch-hhhhhh-h-hhc-chh-hccCcccccccccCCCChhhhcCC---CCEEEEEecCC
Confidence 00000000 0000000 000000 0 000 000 0000000000000000 1123443 59999999999
Q ss_pred CCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChH----HHHHHHHHHHHh
Q 017180 324 PRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPA----MVAQELYQFLQQ 370 (376)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe----~~~~~i~~fl~~ 370 (376)
+.++....+++.+..+++++++++++ |..+.+.+. ++.+.+.+||++
T Consensus 222 ~~~~~~~~~~l~~~~~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 222 EEVPFRYSKKIGRTIPESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp SSSCTHHHHHHHHHSTTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHhCCCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 99998888889888889999999999 997665443 557888899875
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.79 E-value=8.4e-19 Score=173.20 Aligned_cols=225 Identities=12% Similarity=0.061 Sum_probs=140.9
Q ss_pred cCCceeEEEEecccCC---CCCCCcEEEecCCCCCcc---chHhH-HHHHHHH-hhhCCcceEEEEeCCCCCcCCCCCC-
Q 017180 71 KENSINIYYEKHERES---PDPSKNILMIPTISDVST---VEEWR-LVAQDIV-QRVGKVNWRATIVDWPGLGYSDRPK- 141 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~---~~~~~~vvllHG~~~~~~---~~~~~-~~~~~L~-~~~~~~~~~Vi~~D~~G~G~S~~~~- 141 (376)
..+|.++.+....+.. .++.|+||++||.+ .+ ...|. .....|. ++ ||.|+++|+||+|.+....
T Consensus 480 ~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~--~~~~~~~~~~~~~~~~l~~~~----G~~Vv~~D~rG~g~~g~~~~ 553 (740)
T 4a5s_A 480 ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGP--CSQKADTVFRLNWATYLASTE----NIIVASFDGRGSGYQGDKIM 553 (740)
T ss_dssp EETTEEEEEEEEECTTCCTTSCEEEEEECCCCT--TCCCCCCCCCCSHHHHHHHTT----CCEEEEECCTTCSSSCHHHH
T ss_pred ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCC--cccccccccCcCHHHHHHhcC----CeEEEEEcCCCCCcCChhHH
Confidence 4468888877665443 22357889999988 44 12222 2233444 34 9999999999999775210
Q ss_pred -------CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCC
Q 017180 142 -------MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGR 214 (376)
Q Consensus 142 -------~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~ 214 (376)
.....+++.+.+..+.+ .. .....++.|+||||||.+++.+|.++|++++++|+++|... .
T Consensus 554 ~~~~~~~~~~~~~D~~~~i~~l~~-~~---~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~----~---- 621 (740)
T 4a5s_A 554 HAINRRLGTFEVEDQIEAARQFSK-MG---FVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSR----W---- 621 (740)
T ss_dssp GGGTTCTTSHHHHHHHHHHHHHHT-ST---TEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCC----G----
T ss_pred HHHHhhhCcccHHHHHHHHHHHHh-cC---CcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccc----h----
Confidence 11224444444444442 21 11237899999999999999999999999999999998420 0
Q ss_pred CCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCC
Q 017180 215 DSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLD 294 (376)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (376)
. .+. ...... +... + ...+..+.+. .. .
T Consensus 622 ----~------------------~~~-----~~~~~~-~~~~----p--~~~~~~~~~~----------------~~--~ 649 (740)
T 4a5s_A 622 ----E------------------YYD-----SVYTER-YMGL----P--TPEDNLDHYR----------------NS--T 649 (740)
T ss_dssp ----G------------------GSB-----HHHHHH-HHCC----S--STTTTHHHHH----------------HS--C
T ss_pred ----H------------------Hhh-----hHHHHH-HcCC----C--CccccHHHHH----------------hC--C
Confidence 0 000 000010 1000 0 0000000000 00 0
Q ss_pred CCCcHHHHHHHHhcccCCC-cEEEEEeCCCCCCCHHHHHHHhc----ccCCceEEEeCCC-CCC-CCCChHHHHHHHHHH
Q 017180 295 PVNSREEFLQLFADLEGKL-PLLVVSTEGSPRRSKAEMEALKG----AKGVTKFVEVPGA-LLP-QEEYPAMVAQELYQF 367 (376)
Q Consensus 295 ~~~~~~~~~~~~~~i~~~~-Pvlii~G~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~-H~~-~~e~pe~~~~~i~~f 367 (376)
....++++ ++ |+|++||++|..++.+..+.+.+ ...++++++++++ |.+ ..+.++.+.+.+.+|
T Consensus 650 -------~~~~~~~i--~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 720 (740)
T 4a5s_A 650 -------VMSRAENF--KQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHF 720 (740)
T ss_dssp -------SGGGGGGG--GGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHH
T ss_pred -------HHHHHhcC--CCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHH
Confidence 11234556 65 99999999999999877766643 3456799999999 997 677889999999999
Q ss_pred HHhhcCC
Q 017180 368 LQQTFEP 374 (376)
Q Consensus 368 l~~~~~~ 374 (376)
|.+.+..
T Consensus 721 l~~~l~~ 727 (740)
T 4a5s_A 721 IKQCFSL 727 (740)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 9988653
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-17 Score=147.00 Aligned_cols=217 Identities=12% Similarity=0.055 Sum_probs=129.8
Q ss_pred CCcEEEecCCCC-CccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISD-VSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~-~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|+||++||.+. .++...|..++..|++. .||.|+++|+|+.++...+ ...++..+.+..+.+. + ...
T Consensus 80 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~---~g~~vv~~dyr~~p~~~~~---~~~~D~~~a~~~l~~~-~----~d~ 148 (322)
T 3fak_A 80 GKAILYLHGGGYVMGSINTHRSMVGEISRA---SQAAALLLDYRLAPEHPFP---AAVEDGVAAYRWLLDQ-G----FKP 148 (322)
T ss_dssp TCEEEEECCSTTTSCCHHHHHHHHHHHHHH---HTSEEEEECCCCTTTSCTT---HHHHHHHHHHHHHHHH-T----CCG
T ss_pred ccEEEEEcCCccccCChHHHHHHHHHHHHh---cCCEEEEEeCCCCCCCCCC---cHHHHHHHHHHHHHHc-C----CCC
Confidence 789999999552 25667788888888762 1899999999988765422 3445555566666655 2 136
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCC----cceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhc
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVK----PTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVS 244 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~----v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (376)
++++|+|||+||.+++.++.+.+++ ++++|+++|........ .. ........+
T Consensus 149 ~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~--------~~---~~~~~~~~~------------ 205 (322)
T 3fak_A 149 QHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTN--------DS---FKTRAEADP------------ 205 (322)
T ss_dssp GGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCC--------TH---HHHTTTTCC------------
T ss_pred ceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCC--------cC---HHHhCccCc------------
Confidence 7899999999999999999876554 89999999853211000 00 000000000
Q ss_pred cHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCC
Q 017180 245 NEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSP 324 (376)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~ 324 (376)
.........+........... ....+. +...+.. ..|+||++|++|.
T Consensus 206 ------------------~~~~~~~~~~~~~~~~~~~~~----------~~~~sp--~~~~~~~---~pP~li~~g~~D~ 252 (322)
T 3fak_A 206 ------------------MVAPGGINKMAARYLNGADAK----------HPYASP--NFANLKG---LPPLLIHVGRDEV 252 (322)
T ss_dssp ------------------SCCSSHHHHHHHHHHTTSCTT----------CTTTCG--GGSCCTT---CCCEEEEEETTST
T ss_pred ------------------ccCHHHHHHHHHHhcCCCCCC----------CcccCC--CcccccC---CChHhEEEcCcCc
Confidence 001111111111110000000 000000 1011222 3599999999998
Q ss_pred CCCH--HHHHHHhcccCCceEEEeCCC-CCCC-----CCChHHHHHHHHHHHHhhcC
Q 017180 325 RRSK--AEMEALKGAKGVTKFVEVPGA-LLPQ-----EEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 325 ~~~~--~~~~~~~~~~~~~~~~~~~~~-H~~~-----~e~pe~~~~~i~~fl~~~~~ 373 (376)
+++. ...+.+.+...++++++++++ |... .+..+++.+.+.+||.+.++
T Consensus 253 ~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (322)
T 3fak_A 253 LLDDSIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQWA 309 (322)
T ss_dssp THHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHHHHh
Confidence 7542 234455556667899999999 9754 44568899999999998754
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.2e-18 Score=146.60 Aligned_cols=190 Identities=12% Similarity=0.067 Sum_probs=122.1
Q ss_pred CCcEEEecCCCCCccchHhHH----HHHHHHhhhCCcceEEEEeCCC---------------------CCcCCCC---C-
Q 017180 90 SKNILMIPTISDVSTVEEWRL----VAQDIVQRVGKVNWRATIVDWP---------------------GLGYSDR---P- 140 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~----~~~~L~~~~~~~~~~Vi~~D~~---------------------G~G~S~~---~- 140 (376)
.|+|||+||++ ++...|.. +...|.+. ||+|+++|+| |+|.+.. .
T Consensus 5 ~~~vl~lHG~g--~~~~~~~~~~~~l~~~l~~~----g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~ 78 (243)
T 1ycd_A 5 IPKLLFLHGFL--QNGKVFSEKSSGIRKLLKKA----NVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHS 78 (243)
T ss_dssp CCEEEEECCTT--CCHHHHHHHTHHHHHHHHHT----TCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCC
T ss_pred CceEEEeCCCC--ccHHHHHHHHHHHHHHHhhc----ceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCC
Confidence 67899999999 88888874 55555554 8999999999 4554421 0
Q ss_pred --CCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCC------CCcceEEEeccCCCCCCCccc
Q 017180 141 --KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNL------VKPTAIAAVAPTWAGPLPIVF 212 (376)
Q Consensus 141 --~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p------~~v~~lvl~~p~~~~~~~~~~ 212 (376)
....++++..+.+.+.++.. ..+++|+||||||.+|+.+|.+++ ..++.++++++.... .
T Consensus 79 ~~~~~~d~~~~~~~l~~~~~~~-------~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~----~- 146 (243)
T 1ycd_A 79 EISHELDISEGLKSVVDHIKAN-------GPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFT----E- 146 (243)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHH-------CCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCE----E-
T ss_pred CCcchhhHHHHHHHHHHHHHhc-------CCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCC----C-
Confidence 01235566666666666543 356899999999999999998643 246677777652100 0
Q ss_pred CCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhcc
Q 017180 213 GRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGL 292 (376)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (376)
+.. . .. .. . ....+ +. ..
T Consensus 147 -------------------~~~-~--~~---~~------------~----~~~~~--------------------~~-~~ 164 (243)
T 1ycd_A 147 -------------------PDP-E--HP---GE------------L----RITEK--------------------FR-DS 164 (243)
T ss_dssp -------------------ECT-T--ST---TC------------E----EECGG--------------------GT-TT
T ss_pred -------------------ccc-c--cc---cc------------c----ccchh--------------------HH-Hh
Confidence 000 0 00 00 0 00000 00 00
Q ss_pred CCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCC-------ceEEEeCCC-CCCCCCChHHHHHHH
Q 017180 293 LDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGV-------TKFVEVPGA-LLPQEEYPAMVAQEL 364 (376)
Q Consensus 293 ~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-------~~~~~~~~~-H~~~~e~pe~~~~~i 364 (376)
+ ..+.++ ++|+++++|++|.+++.+..+.+.+..++ ...++++++ |+...+ +.+.+.|
T Consensus 165 ---------~-~~~~~~--~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~--~~~~~~i 230 (243)
T 1ycd_A 165 ---------F-AVKPDM--KTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK--KDIIRPI 230 (243)
T ss_dssp ---------T-CCCTTC--CCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC--HHHHHHH
T ss_pred ---------c-cCcccC--CCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCch--HHHHHHH
Confidence 0 012345 89999999999999999988888765543 245566666 987655 3599999
Q ss_pred HHHHHhhcC
Q 017180 365 YQFLQQTFE 373 (376)
Q Consensus 365 ~~fl~~~~~ 373 (376)
.+||++...
T Consensus 231 ~~fl~~~~~ 239 (243)
T 1ycd_A 231 VEQITSSLQ 239 (243)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhhh
Confidence 999998754
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.8e-17 Score=142.58 Aligned_cols=213 Identities=9% Similarity=-0.008 Sum_probs=131.3
Q ss_pred CCcEEEecCCCCCccchHhHH--HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRL--VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~--~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
.|+||++||++ ++...|.. .+..+.+. .++.|+++|++++|.++.+......+.+++++.++++.........
T Consensus 41 ~p~vv~~HG~~--~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 115 (263)
T 2uz0_A 41 IPVLYLLHGMS--GNHNSWLKRTNVERLLRG---TNLIVVMPNTSNGWYTDTQYGFDYYTALAEELPQVLKRFFPNMTSK 115 (263)
T ss_dssp BCEEEEECCTT--CCTTHHHHHSCHHHHTTT---CCCEEEECCCTTSTTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCC
T ss_pred CCEEEEECCCC--CCHHHHHhccCHHHHHhc---CCeEEEEECCCCCccccCCCcccHHHHHHHHHHHHHHHHhccccCC
Confidence 67899999999 88888877 56666542 2799999999999887754333335666778888877642100112
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEK 247 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (376)
.++++|+|||+||.+++.+|. +|++++++|+++|...... . . . ..... ....
T Consensus 116 ~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~--~-~-----~--------~~~~~-----------~~~~ 167 (263)
T 2uz0_A 116 REKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQN--F-S-----P--------ESQNL-----------GSPA 167 (263)
T ss_dssp GGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSS--C-C-----G--------GGTTC-----------SCHH
T ss_pred CCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhh--c-c-----c--------ccccc-----------ccch
Confidence 478999999999999999999 9999999999998531100 0 0 0 00000 0011
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCC
Q 017180 248 AIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRS 327 (376)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~ 327 (376)
.....+.. ... . .... .+....+.++...+|+++++|++|.+++
T Consensus 168 ~~~~~~~~-----~~~------------------~--------~~~~-----~~~~~~~~~~~~~~p~li~~G~~D~~v~ 211 (263)
T 2uz0_A 168 YWRGVFGE-----IRD------------------W--------TTSP-----YSLESLAKKSDKKTKLWAWCGEQDFLYE 211 (263)
T ss_dssp HHHHHHCC-----CSC------------------T--------TTST-----TSHHHHGGGCCSCSEEEEEEETTSTTHH
T ss_pred hHHHHcCC-----hhh------------------h--------cccc-----CCHHHHHHhccCCCeEEEEeCCCchhhH
Confidence 11111110 000 0 0000 0023344455212799999999999875
Q ss_pred H--HHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhhcC
Q 017180 328 K--AEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 328 ~--~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
. ...+.+.+...++++++++++|... ..++..+.+.+||.+.+.
T Consensus 212 ~~~~~~~~l~~~g~~~~~~~~~g~H~~~--~~~~~~~~~~~~l~~~l~ 257 (263)
T 2uz0_A 212 ANNLAVKNLKKLGFDVTYSHSAGTHEWY--YWEKQLEVFLTTLPIDFK 257 (263)
T ss_dssp HHHHHHHHHHHTTCEEEEEEESCCSSHH--HHHHHHHHHHHHSSSCCC
T ss_pred HHHHHHHHHHHCCCCeEEEECCCCcCHH--HHHHHHHHHHHHHHhhcc
Confidence 2 2333444444567899999878642 124567888899987654
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.1e-18 Score=167.58 Aligned_cols=229 Identities=11% Similarity=-0.020 Sum_probs=135.3
Q ss_pred CCceeEEEEecccCC-CCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC---C-----C
Q 017180 72 ENSINIYYEKHERES-PDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP---K-----M 142 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~-~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~---~-----~ 142 (376)
.+|.++.+....+.. .++.|+||++||.+.......|......|.++ ||.|+++|+||+|++... . .
T Consensus 469 ~dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~----G~~v~~~d~rG~g~~g~~~~~~~~~~~~ 544 (741)
T 1yr2_A 469 KDGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTPWFSAGFMTWIDS----GGAFALANLRGGGEYGDAWHDAGRRDKK 544 (741)
T ss_dssp TTSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCCCCCHHHHHHHTT----TCEEEEECCTTSSTTHHHHHHTTSGGGT
T ss_pred CCCCEEEEEEEecCCCCCCCcEEEEECCCCCccCCCCcCHHHHHHHHC----CcEEEEEecCCCCCCCHHHHHhhhhhcC
Confidence 457777766554332 22368999999987333333555666677776 999999999999987311 0 1
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhh
Q 017180 143 DYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRY 222 (376)
Q Consensus 143 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~ 222 (376)
....+++.+.+..+++.-. ....+++++|||+||.+++.++.++|++++++|+.+|.... ..
T Consensus 545 ~~~~~D~~~~~~~l~~~~~----~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~--~~------------ 606 (741)
T 1yr2_A 545 QNVFDDFIAAGEWLIANGV----TPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDM--LR------------ 606 (741)
T ss_dssp HHHHHHHHHHHHHHHHTTS----SCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCT--TS------------
T ss_pred CCcHHHHHHHHHHHHHcCC----CChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCcccc--cc------------
Confidence 1234556666666665521 23578999999999999999999999999999999884210 00
Q ss_pred HHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHH
Q 017180 223 GLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEF 302 (376)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (376)
....+ .. ..... .+ .++ ..++..+.+.. . . .
T Consensus 607 -----~~~~~-~~----------~~~~~-~~-----g~~--~~~~~~~~~~~-----------------~-s-------p 637 (741)
T 1yr2_A 607 -----FDQFT-AG----------RYWVD-DY-----GYP--EKEADWRVLRR-----------------Y-S-------P 637 (741)
T ss_dssp -----GGGST-TG----------GGGHH-HH-----CCT--TSHHHHHHHHT-----------------T-C-------G
T ss_pred -----ccCCC-CC----------chhHH-Hc-----CCC--CCHHHHHHHHH-----------------c-C-------c
Confidence 00000 00 00000 00 111 01111111000 0 0 0
Q ss_pred HHHHhc-ccCCC-cEEEEEeCCCCCCCHHHHHHHhccc-------CCceEEEeCCC-CCCCCCC--hHHHHHHHHHHHHh
Q 017180 303 LQLFAD-LEGKL-PLLVVSTEGSPRRSKAEMEALKGAK-------GVTKFVEVPGA-LLPQEEY--PAMVAQELYQFLQQ 370 (376)
Q Consensus 303 ~~~~~~-i~~~~-Pvlii~G~~D~~~~~~~~~~~~~~~-------~~~~~~~~~~~-H~~~~e~--pe~~~~~i~~fl~~ 370 (376)
...+.. + ++ |+|+++|++|..+++....++.+.+ ..+++++++++ |....+. +.++.+.+.+||.+
T Consensus 638 ~~~~~~~~--~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 715 (741)
T 1yr2_A 638 YHNVRSGV--DYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQAFLAH 715 (741)
T ss_dssp GGCCCTTS--CCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHHHHHHHHH
T ss_pred hhhhhccC--CCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHH
Confidence 011222 4 54 9999999999999988777665433 34789999998 9976543 45788999999998
Q ss_pred hcC
Q 017180 371 TFE 373 (376)
Q Consensus 371 ~~~ 373 (376)
.++
T Consensus 716 ~l~ 718 (741)
T 1yr2_A 716 FTG 718 (741)
T ss_dssp HHT
T ss_pred HcC
Confidence 764
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1e-17 Score=164.70 Aligned_cols=230 Identities=11% Similarity=0.040 Sum_probs=139.4
Q ss_pred CCceeEEEEecccCC---CCCCCcEEEecCCCCCccchHhHHHHHHHHh-hhCCcceEEEEeCCCCCcCCCCC-------
Q 017180 72 ENSINIYYEKHERES---PDPSKNILMIPTISDVSTVEEWRLVAQDIVQ-RVGKVNWRATIVDWPGLGYSDRP------- 140 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~---~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~-~~~~~~~~Vi~~D~~G~G~S~~~------- 140 (376)
.+|.+|.+....+.. .++.|+||++||.+.......|......|.+ + ||.|+++|+||+|.+...
T Consensus 445 ~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~----G~~v~~~d~rG~g~~g~~~~~~~~~ 520 (710)
T 2xdw_A 445 KDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHM----GGVLAVANIRGGGEYGETWHKGGIL 520 (710)
T ss_dssp TTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHH----CCEEEEECCTTSSTTHHHHHHTTSG
T ss_pred CCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhC----CcEEEEEccCCCCCCChHHHHhhhh
Confidence 457777665543322 2236889999998733333345444445555 5 999999999999987421
Q ss_pred -CCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchh
Q 017180 141 -KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSME 219 (376)
Q Consensus 141 -~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~ 219 (376)
.....++++.+.+..+++.-. ....+++++|||+||.+++.++.++|++++++|+.+|.... ...
T Consensus 521 ~~~~~~~~D~~~~~~~l~~~~~----~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~--~~~-------- 586 (710)
T 2xdw_A 521 ANKQNCFDDFQCAAEYLIKEGY----TSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDM--LKF-------- 586 (710)
T ss_dssp GGTHHHHHHHHHHHHHHHHTTS----CCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCT--TTG--------
T ss_pred hcCCchHHHHHHHHHHHHHcCC----CCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccH--hhc--------
Confidence 011223455555555555421 23578999999999999999999999999999999884210 000
Q ss_pred hhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcH
Q 017180 220 TRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSR 299 (376)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (376)
.... .. ...... +.++ ..++..+.+....
T Consensus 587 ---------~~~~-~~----------~~~~~~------~g~~--~~~~~~~~~~~~s----------------------- 615 (710)
T 2xdw_A 587 ---------HKYT-IG----------HAWTTD------YGCS--DSKQHFEWLIKYS----------------------- 615 (710)
T ss_dssp ---------GGST-TG----------GGGHHH------HCCT--TSHHHHHHHHHHC-----------------------
T ss_pred ---------cccC-CC----------hhHHHh------CCCC--CCHHHHHHHHHhC-----------------------
Confidence 0000 00 000000 0110 1111111111100
Q ss_pred HHHHHHHh-----cccCCC-cEEEEEeCCCCCCCHHHHHHHhccc-----------CCceEEEeCCC-CCCCCC--ChHH
Q 017180 300 EEFLQLFA-----DLEGKL-PLLVVSTEGSPRRSKAEMEALKGAK-----------GVTKFVEVPGA-LLPQEE--YPAM 359 (376)
Q Consensus 300 ~~~~~~~~-----~i~~~~-Pvlii~G~~D~~~~~~~~~~~~~~~-----------~~~~~~~~~~~-H~~~~e--~pe~ 359 (376)
....+. ++ ++ |+|+++|++|..+++....++.+.+ ..+++++++++ |..... ++.+
T Consensus 616 --p~~~~~~~~~~~~--~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 691 (710)
T 2xdw_A 616 --PLHNVKLPEADDI--QYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIE 691 (710)
T ss_dssp --GGGCCCCCSSTTC--CCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHH
T ss_pred --cHhhhcccccccC--CCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHH
Confidence 000122 44 66 9999999999999887777664332 34589999998 997664 3567
Q ss_pred HHHHHHHHHHhhcCC
Q 017180 360 VAQELYQFLQQTFEP 374 (376)
Q Consensus 360 ~~~~i~~fl~~~~~~ 374 (376)
+.+.+.+||.+.++.
T Consensus 692 ~~~~~~~fl~~~l~~ 706 (710)
T 2xdw_A 692 EVSDMFAFIARCLNI 706 (710)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCC
Confidence 889999999987653
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=7.6e-18 Score=146.44 Aligned_cols=104 Identities=16% Similarity=0.142 Sum_probs=75.4
Q ss_pred CCcEEEecCCCCCccchHhHHH---HHHHHhhhCCcceEEEEeCC--CCCcCCCCC-------------CCCC-------
Q 017180 90 SKNILMIPTISDVSTVEEWRLV---AQDIVQRVGKVNWRATIVDW--PGLGYSDRP-------------KMDY------- 144 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~---~~~L~~~~~~~~~~Vi~~D~--~G~G~S~~~-------------~~~~------- 144 (376)
.|+||++||++ .+...|... ...+.+. ||.|+++|+ ||+|.+... ....
T Consensus 45 ~p~vv~lHG~~--~~~~~~~~~~~~~~~~~~~----g~~vv~~d~~~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 118 (282)
T 3fcx_A 45 CPALYWLSGLT--CTEQNFISKSGYHQSASEH----GLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNY 118 (282)
T ss_dssp EEEEEEECCTT--CCSHHHHHHSCCHHHHHHH----TCEEEEECSCSSCCCC--------CCCCCCTTCBCCSTTHHHHC
T ss_pred CCEEEEEcCCC--CCccchhhcchHHHHhhcC----CeEEEEeccccCccccccccccccccCCcccccccCcccccchh
Confidence 57899999999 888888665 5777776 999999999 777654311 0000
Q ss_pred C-HHHHHHHHHHHHh-CCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 145 N-ADVMEKFVVDLIN-APDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 145 ~-~~~~~~~l~~~l~-~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
. .+...+++.++++ .++ ...++++|+||||||.+|+.+|.++|++++++++++|.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~----~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~ 175 (282)
T 3fcx_A 119 RMYSYVTEELPQLINANFP----VDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPI 175 (282)
T ss_dssp BHHHHHHTHHHHHHHHHSS----EEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCC
T ss_pred hHHHHHHHHHHHHHHHHcC----CCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCc
Confidence 1 1223445666665 332 12367999999999999999999999999999999984
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.76 E-value=9e-18 Score=164.68 Aligned_cols=231 Identities=13% Similarity=0.067 Sum_probs=138.6
Q ss_pred CCceeEEEEecccCC---CCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC----C---
Q 017180 72 ENSINIYYEKHERES---PDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP----K--- 141 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~---~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~----~--- 141 (376)
.+|.++.+....+.. .++.|+||++||.+.......|......|.++ ||.|+++|+||+|.+... .
T Consensus 425 ~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~----G~~v~~~d~rG~g~~g~~~~~~~~~~ 500 (695)
T 2bkl_A 425 KDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDA----GGVYAVANLRGGGEYGKAWHDAGRLD 500 (695)
T ss_dssp TTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHT----TCEEEEECCTTSSTTCHHHHHTTSGG
T ss_pred CCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhC----CCEEEEEecCCCCCcCHHHHHhhHhh
Confidence 457777666543321 12368899999976223223566666667665 999999999998876421 1
Q ss_pred -CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhh
Q 017180 142 -MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMET 220 (376)
Q Consensus 142 -~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~ 220 (376)
.....+++.+.+..+++.-. ....+++++|||+||.+++.++.++|++++++|+.+|..... .
T Consensus 501 ~~~~~~~D~~~~~~~l~~~~~----~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~--~---------- 564 (695)
T 2bkl_A 501 KKQNVFDDFHAAAEYLVQQKY----TQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMV--R---------- 564 (695)
T ss_dssp GTHHHHHHHHHHHHHHHHTTS----CCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTT--T----------
T ss_pred cCCCcHHHHHHHHHHHHHcCC----CCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchh--h----------
Confidence 11123444444444444421 235689999999999999999999999999999998842100 0
Q ss_pred hhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHH
Q 017180 221 RYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 300 (376)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (376)
....+ .. ...... + .++ ..++..+.+....
T Consensus 565 -------~~~~~-~~----------~~~~~~-~-----g~~--~~~~~~~~~~~~s------------------------ 594 (695)
T 2bkl_A 565 -------YHLFG-SG----------RTWIPE-Y-----GTA--EKPEDFKTLHAYS------------------------ 594 (695)
T ss_dssp -------GGGST-TG----------GGGHHH-H-----CCT--TSHHHHHHHHHHC------------------------
T ss_pred -------ccccC-CC----------cchHHH-h-----CCC--CCHHHHHHHHhcC------------------------
Confidence 00000 00 000000 0 111 1111111111000
Q ss_pred HHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc-------CCceEEEeCCC-CCCC--CCChHHHHHHHHHHHHh
Q 017180 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK-------GVTKFVEVPGA-LLPQ--EEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 301 ~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~-------~~~~~~~~~~~-H~~~--~e~pe~~~~~i~~fl~~ 370 (376)
....+.++...+|+|+++|++|..++....+++.+.+ .++++++++++ |... .+++.++...+.+||.+
T Consensus 595 -p~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 673 (695)
T 2bkl_A 595 -PYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQ 673 (695)
T ss_dssp -GGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHH
T ss_pred -hHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHH
Confidence 0011222200269999999999999988777765432 35889999998 9973 35567788889999998
Q ss_pred hcC
Q 017180 371 TFE 373 (376)
Q Consensus 371 ~~~ 373 (376)
.++
T Consensus 674 ~l~ 676 (695)
T 2bkl_A 674 VLD 676 (695)
T ss_dssp HTT
T ss_pred HcC
Confidence 765
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.6e-17 Score=141.20 Aligned_cols=217 Identities=11% Similarity=0.029 Sum_probs=128.8
Q ss_pred ceeEEEEecccCC--CCCCCcEEEecCCCCCccchHhHH---HHHHHHhhhCCcceEEEEeCCCC--------------C
Q 017180 74 SINIYYEKHERES--PDPSKNILMIPTISDVSTVEEWRL---VAQDIVQRVGKVNWRATIVDWPG--------------L 134 (376)
Q Consensus 74 g~~l~y~~~g~~~--~~~~~~vvllHG~~~~~~~~~~~~---~~~~L~~~~~~~~~~Vi~~D~~G--------------~ 134 (376)
|.++.+...-+.. .++.|+||++||++ .+...|.. +...+.+. |+.|+++|.++ +
T Consensus 33 ~~~~~~~v~~P~~~~~~~~p~vv~lHG~~--~~~~~~~~~~~~~~~~~~~----g~~vv~~d~~~rg~~~~~~~~~~~G~ 106 (283)
T 4b6g_A 33 QCEMKFAVYLPNNPENRPLGVIYWLSGLT--CTEQNFITKSGFQRYAAEH----QVIVVAPDTSPRGEQVPNDDAYDLGQ 106 (283)
T ss_dssp TEEEEEEEEECCCTTCCCEEEEEEECCTT--CCSHHHHHHSCTHHHHHHH----TCEEEEECSSCCSTTSCCCSSTTSBT
T ss_pred CCceEEEEEeCCCCCCCCCCEEEEEcCCC--CCccchhhcccHHHHHhhC----CeEEEEeccccccccccccccccccC
Confidence 4444444443322 22257899999999 77777743 44556665 89999999873 3
Q ss_pred cCCCC---CC----CCCC-HHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCC
Q 017180 135 GYSDR---PK----MDYN-ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAG 206 (376)
Q Consensus 135 G~S~~---~~----~~~~-~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~ 206 (376)
|.|-- +. ..+. .+..++++..++++... ..++++|+||||||.+|+.+|.++|++++++++++|....
T Consensus 107 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~ 182 (283)
T 4b6g_A 107 SAGFYLNATEQPWAANYQMYDYILNELPRLIEKHFP----TNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILSP 182 (283)
T ss_dssp TBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSC----EEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCCG
T ss_pred CCcccccCccCcccchhhHHHHHHHHHHHHHHHhCC----CCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCcccc
Confidence 33310 00 0112 33335567777766520 1368999999999999999999999999999999984210
Q ss_pred CCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhH
Q 017180 207 PLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPA 286 (376)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (376)
...+ .. ...+...+.. .+... .
T Consensus 183 ----------------------~~~~------~~-----~~~~~~~~g~---------~~~~~----------------~ 204 (283)
T 4b6g_A 183 ----------------------SLVP------WG-----EKAFTAYLGK---------DREKW----------------Q 204 (283)
T ss_dssp ----------------------GGSH------HH-----HHHHHHHHCS---------CGGGG----------------G
T ss_pred ----------------------ccCc------ch-----hhhHHhhcCC---------chHHH----------------H
Confidence 0000 00 0011111100 00000 0
Q ss_pred HHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCH-----HHHHHHhcccCCceEEEeCCC-CCCCCCChHHH
Q 017180 287 AFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSK-----AEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMV 360 (376)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~-----~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~ 360 (376)
.. + ....++++...+|+++++|++|.+++. +..+.+.+...++++++++++ |.. ...+..
T Consensus 205 -----~~----~---~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~--~~~~~~ 270 (283)
T 4b6g_A 205 -----QY----D---ANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSY--YFIASF 270 (283)
T ss_dssp -----GG----C---HHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHHHHHHHTCCCEEEEETTCCSSH--HHHHHH
T ss_pred -----hc----C---HHHHHHhcccCCCEEEEecCCCccCcchhhHHHHHHHHHHcCCCceEEEeCCCCcCH--hHHHHH
Confidence 00 0 112223331156999999999998875 334455555667999999998 973 233456
Q ss_pred HHHHHHHHHhhc
Q 017180 361 AQELYQFLQQTF 372 (376)
Q Consensus 361 ~~~i~~fl~~~~ 372 (376)
.....+|+.+.+
T Consensus 271 l~~~l~~~~~~l 282 (283)
T 4b6g_A 271 IGEHIAYHAAFL 282 (283)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHHhc
Confidence 677778887764
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=7.1e-18 Score=146.13 Aligned_cols=193 Identities=12% Similarity=0.123 Sum_probs=128.6
Q ss_pred EEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCC------CCcCCCCC-------CC-
Q 017180 77 IYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWP------GLGYSDRP-------KM- 142 (376)
Q Consensus 77 l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~------G~G~S~~~-------~~- 142 (376)
+.|...+....++.|.|||+||+| ++...|..+++.|..... ++.+++++-| |.|.+--+ ..
T Consensus 53 l~y~~~p~~~~~~~plVI~LHG~G--~~~~~~~~~~~~l~~~~~--~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~ 128 (285)
T 4fhz_A 53 LTFGRRGAAPGEATSLVVFLHGYG--ADGADLLGLAEPLAPHLP--GTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSET 128 (285)
T ss_dssp CCEEEEESCTTCCSEEEEEECCTT--BCHHHHHTTHHHHGGGST--TEEEEEECCSEECTTSSSCEESSCCHHHHCCCHH
T ss_pred ceeecCCCCCCCCCcEEEEEcCCC--CCHHHHHHHHHHHHHhCC--CeEEEecCCCcccccCCCcccccccccccCcccc
Confidence 345555554444467899999999 999999999999986433 6889998754 44543100 00
Q ss_pred --CCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhh
Q 017180 143 --DYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMET 220 (376)
Q Consensus 143 --~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~ 220 (376)
........+++.++++++.....+..++++|+|+|+||.+++.++.++|+++.++|.+++.. +
T Consensus 129 ~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l----~----------- 193 (285)
T 4fhz_A 129 AAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRL----L----------- 193 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCC----S-----------
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCc----c-----------
Confidence 00112223344444443211111235789999999999999999999999999999987621 0
Q ss_pred hhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHH
Q 017180 221 RYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 300 (376)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (376)
....+.
T Consensus 194 ------------------------~~~~~~-------------------------------------------------- 199 (285)
T 4fhz_A 194 ------------------------APERLA-------------------------------------------------- 199 (285)
T ss_dssp ------------------------CHHHHH--------------------------------------------------
T ss_pred ------------------------Cchhhh--------------------------------------------------
Confidence 010000
Q ss_pred HHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHh----cccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 301 EFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALK----GAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 301 ~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
..... +.|++++||++|.++|.+..+.+. +..-+++++++++. |.+. +++ .+.+.+||++.+
T Consensus 200 ----~~~~~--~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~---~~~-l~~~~~fL~~~L 266 (285)
T 4fhz_A 200 ----EEARS--KPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIA---PDG-LSVALAFLKERL 266 (285)
T ss_dssp ----HHCCC--CCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCC---HHH-HHHHHHHHHHHC
T ss_pred ----hhhhh--cCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC---HHH-HHHHHHHHHHHC
Confidence 00011 679999999999999988776553 44557899999997 9753 444 567889999876
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-16 Score=140.08 Aligned_cols=104 Identities=9% Similarity=0.146 Sum_probs=79.8
Q ss_pred CCcEEEecCCCCCccchHh-HHHHHHHHhhhCCcceEEEEeCCC------------CC--cCCCCCC--CCCCHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEW-RLVAQDIVQRVGKVNWRATIVDWP------------GL--GYSDRPK--MDYNADVMEKF 152 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~-~~~~~~L~~~~~~~~~~Vi~~D~~------------G~--G~S~~~~--~~~~~~~~~~~ 152 (376)
.|+||++||++ .+...| ..+...+.+. ||.|+++|+| |+ |.|..+. .....++..+.
T Consensus 54 ~p~vv~lHG~~--~~~~~~~~~~~~~l~~~----g~~v~~~d~~~~~~p~~~~~~~g~~~g~s~~~~~~~~~~~~~~~~~ 127 (304)
T 3d0k_A 54 RPVVVVQHGVL--RNGADYRDFWIPAADRH----KLLIVAPTFSDEIWPGVESYNNGRAFTAAGNPRHVDGWTYALVARV 127 (304)
T ss_dssp SCEEEEECCTT--CCHHHHHHHTHHHHHHH----TCEEEEEECCTTTSCHHHHTTTTTCBCTTSCBCCGGGSTTHHHHHH
T ss_pred CcEEEEeCCCC--CCHHHHHHHHHHHHHHC----CcEEEEeCCccccCCCccccccCccccccCCCCcccchHHHHHHHH
Confidence 68899999999 888888 6778888876 9999999999 66 7776432 23444555445
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCC-CcceEEEeccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV-KPTAIAAVAPT 203 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~p~ 203 (376)
+..+.+... ...++++|+||||||.+++.++.++|+ +++++|+.++.
T Consensus 128 ~~~l~~~~~----~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~ 175 (304)
T 3d0k_A 128 LANIRAAEI----ADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPG 175 (304)
T ss_dssp HHHHHHTTS----CCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCS
T ss_pred HHHHHhccC----CCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCc
Confidence 555555432 236789999999999999999999995 78999988753
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=6.6e-17 Score=158.32 Aligned_cols=231 Identities=11% Similarity=-0.007 Sum_probs=137.3
Q ss_pred CCceeEEEEecccC---CCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC---C----
Q 017180 72 ENSINIYYEKHERE---SPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP---K---- 141 (376)
Q Consensus 72 ~~g~~l~y~~~g~~---~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~---~---- 141 (376)
.+|.+|.+...-+. ..++.|+||++||.........|......|.++ ||.|+++|+||+|.+... .
T Consensus 433 ~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~----G~~v~~~d~RG~g~~g~~~~~~~~~~ 508 (693)
T 3iuj_A 433 KDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDL----GGVYAVANLRGGGEYGQAWHLAGTQQ 508 (693)
T ss_dssp TTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHT----TCEEEEECCTTSSTTCHHHHHTTSGG
T ss_pred CCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHC----CCEEEEEeCCCCCccCHHHHHhhhhh
Confidence 45666665543322 122368999999977334445566666677776 999999999999876421 0
Q ss_pred -CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhh
Q 017180 142 -MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMET 220 (376)
Q Consensus 142 -~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~ 220 (376)
....++++.+.+..+++.-. ....++.++|||+||.+++.++.++|++++++|+.+|.... ..
T Consensus 509 ~~~~~~~D~~~~~~~l~~~~~----~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~--~~---------- 572 (693)
T 3iuj_A 509 NKQNVFDDFIAAAEYLKAEGY----TRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDM--LR---------- 572 (693)
T ss_dssp GTHHHHHHHHHHHHHHHHTTS----CCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCT--TT----------
T ss_pred cCCCcHHHHHHHHHHHHHcCC----CCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchh--hh----------
Confidence 11134555555555655521 23578999999999999999999999999999999884210 00
Q ss_pred hhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHH
Q 017180 221 RYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSRE 300 (376)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (376)
..... .. ..... .+.++ ....+..+.+... .
T Consensus 573 -------~~~~~-~~----------~~~~~------~~g~p-~~~~~~~~~~~~~-s----------------------- 603 (693)
T 3iuj_A 573 -------YHTFT-AG----------TGWAY------DYGTS-ADSEAMFDYLKGY-S----------------------- 603 (693)
T ss_dssp -------GGGSG-GG----------GGCHH------HHCCT-TSCHHHHHHHHHH-C-----------------------
T ss_pred -------hccCC-Cc----------hhHHH------HcCCc-cCHHHHHHHHHhc-C-----------------------
Confidence 00000 00 00000 00111 0001101111000 0
Q ss_pred HHHHHHhc-ccCCCc-EEEEEeCCCCCCCHHHHHHHhccc-------CCceEEEeCCC-CCCCC--CChHHHHHHHHHHH
Q 017180 301 EFLQLFAD-LEGKLP-LLVVSTEGSPRRSKAEMEALKGAK-------GVTKFVEVPGA-LLPQE--EYPAMVAQELYQFL 368 (376)
Q Consensus 301 ~~~~~~~~-i~~~~P-vlii~G~~D~~~~~~~~~~~~~~~-------~~~~~~~~~~~-H~~~~--e~pe~~~~~i~~fl 368 (376)
....+.+ + ++| +|+++|++|..+++....++.+.+ ..+++++++++ |.... ++..+..+.+.+||
T Consensus 604 -p~~~~~~~~--~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 680 (693)
T 3iuj_A 604 -PLHNVRPGV--SYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFT 680 (693)
T ss_dssp -HHHHCCTTC--CCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHHHHHHHH
T ss_pred -HHHhhcccC--CCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHH
Confidence 1223444 5 777 999999999999887777664332 34688999998 99765 45667888899999
Q ss_pred HhhcCC
Q 017180 369 QQTFEP 374 (376)
Q Consensus 369 ~~~~~~ 374 (376)
.+.++.
T Consensus 681 ~~~l~~ 686 (693)
T 3iuj_A 681 LYEMGY 686 (693)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 988653
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=8.2e-17 Score=145.21 Aligned_cols=228 Identities=13% Similarity=0.020 Sum_probs=128.5
Q ss_pred CCcEEEecCCCCC---ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCC
Q 017180 90 SKNILMIPTISDV---STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSS 166 (376)
Q Consensus 90 ~~~vvllHG~~~~---~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 166 (376)
.|+||++||.+.. .....|..++..|++.. ||.|+++|+|+.+....+ ...++..+.+..+.+........
T Consensus 112 ~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~---g~~Vv~~dyR~~p~~~~~---~~~~D~~~a~~~l~~~~~~~~~~ 185 (365)
T 3ebl_A 112 FPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLS---KGVVVSVNYRRAPEHRYP---CAYDDGWTALKWVMSQPFMRSGG 185 (365)
T ss_dssp CEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHH---TSEEEEECCCCTTTSCTT---HHHHHHHHHHHHHHHCTTTEETT
T ss_pred ceEEEEEcCCccccCCCchhhHHHHHHHHHHHC---CCEEEEeeCCCCCCCCCc---HHHHHHHHHHHHHHhCchhhhCC
Confidence 5889999997622 22334778888887631 799999999987654322 22344444444444332100011
Q ss_pred CCC-cEEEEecchHHHHHHHHHHhCCC---CcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhh
Q 017180 167 SES-DLVIFGGGHAATLTVRAAKKNLV---KPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNML 242 (376)
Q Consensus 167 ~~~-~~~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (376)
... +++|+|+|+||.+|+.+|.+.++ +++++|+++|........ ... ......+
T Consensus 186 d~~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~--------~~~----~~~~~~~---------- 243 (365)
T 3ebl_A 186 DAQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGGTERT--------ESE----RRLDGKY---------- 243 (365)
T ss_dssp TTEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCC--------HHH----HHHTTTS----------
T ss_pred CCCCcEEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccCCCcCC--------hhh----hhcCCCc----------
Confidence 345 89999999999999999986655 799999999853211000 000 0000000
Q ss_pred hccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCC
Q 017180 243 VSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEG 322 (376)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~ 322 (376)
....+....+............. .... .... ....++.+. -.|+|+++|++
T Consensus 244 --------------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~-p~~~------~~~~l~~~~-~pP~Li~~G~~ 294 (365)
T 3ebl_A 244 --------------------FVTLQDRDWYWKAYLPEDADRDH-PACN-PFGP------NGRRLGGLP-FAKSLIIVSGL 294 (365)
T ss_dssp --------------------SCCHHHHHHHHHHHSCTTCCTTS-TTTC-TTST------TCCCCTTSC-CCCEEEEEETT
T ss_pred --------------------ccCHHHHHHHHHHhCCCCCCCCC-cccC-CCCC------cchhhccCC-CCCEEEEEcCc
Confidence 01111111111111000000000 0000 0000 001122110 25899999999
Q ss_pred CCCCCH--HHHHHHhcccCCceEEEeCCC-CCCC----CCChHHHHHHHHHHHHhhcCC
Q 017180 323 SPRRSK--AEMEALKGAKGVTKFVEVPGA-LLPQ----EEYPAMVAQELYQFLQQTFEP 374 (376)
Q Consensus 323 D~~~~~--~~~~~~~~~~~~~~~~~~~~~-H~~~----~e~pe~~~~~i~~fl~~~~~~ 374 (376)
|..++. +..+.+.+....+++++++++ |..+ .++.+++.+.|.+||++....
T Consensus 295 D~l~~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~ 353 (365)
T 3ebl_A 295 DLTCDRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYY 353 (365)
T ss_dssp STTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC-
T ss_pred ccchhHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhhc
Confidence 987654 445556666678999999999 9754 466788999999999987643
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.3e-17 Score=151.70 Aligned_cols=106 Identities=7% Similarity=0.028 Sum_probs=76.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-----------------CC---------
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-----------------MD--------- 143 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-----------------~~--------- 143 (376)
.|+|||+||++ ++...|..++..|+++ ||.|+++|+||+|.|.... ..
T Consensus 98 ~P~Vv~~HG~~--~~~~~~~~~a~~La~~----Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 171 (383)
T 3d59_A 98 YPLVVFSHGLG--AFRTLYSAIGIDLASH----GFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHI 171 (383)
T ss_dssp EEEEEEECCTT--CCTTTTHHHHHHHHHT----TCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHH
T ss_pred CCEEEEcCCCC--CCchHHHHHHHHHHhC----ceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhh
Confidence 57899999999 8888999999999997 9999999999999875200 00
Q ss_pred --CCHHHHHHHHHHHHhCCCC--------------------CCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEec
Q 017180 144 --YNADVMEKFVVDLINAPDS--------------------PVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVA 201 (376)
Q Consensus 144 --~~~~~~~~~l~~~l~~l~~--------------------~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~ 201 (376)
...+..++|+..+++.+.. ......+++.++|||+||.+++.++.+.+ +++++|+++
T Consensus 172 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~ 250 (383)
T 3d59_A 172 RNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALD 250 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEES
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeC
Confidence 0011223455444432210 00112457999999999999999988765 699999998
Q ss_pred c
Q 017180 202 P 202 (376)
Q Consensus 202 p 202 (376)
|
T Consensus 251 ~ 251 (383)
T 3d59_A 251 A 251 (383)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.71 E-value=6.6e-17 Score=159.38 Aligned_cols=233 Identities=11% Similarity=0.006 Sum_probs=139.0
Q ss_pred CCceeEEEEecccC---CCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC----C---
Q 017180 72 ENSINIYYEKHERE---SPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP----K--- 141 (376)
Q Consensus 72 ~~g~~l~y~~~g~~---~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~----~--- 141 (376)
.+|.+|.+...-+. ..++.|+||++||.++......|......|.++ ||.|+++|+||+|.+... .
T Consensus 488 ~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~----G~~v~~~d~RG~g~~G~~~~~~~~~~ 563 (751)
T 2xe4_A 488 PDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDR----GMIFAIAHIRGGSELGRAWYEIGAKY 563 (751)
T ss_dssp TTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTT----TCEEEEECCTTSCTTCTHHHHTTSSG
T ss_pred CCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHhC----CcEEEEEeeCCCCCcCcchhhccccc
Confidence 45766664432211 112368899999987333333566666778776 999999999999976421 1
Q ss_pred --CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchh
Q 017180 142 --MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSME 219 (376)
Q Consensus 142 --~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~ 219 (376)
....++++.+.+..+++.-. ....++.++|+|+||.+++.++.++|++++++|+.+|...
T Consensus 564 ~~~~~~~~D~~~~~~~l~~~~~----~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d-------------- 625 (751)
T 2xe4_A 564 LTKRNTFSDFIAAAEFLVNAKL----TTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVD-------------- 625 (751)
T ss_dssp GGTHHHHHHHHHHHHHHHHTTS----CCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCC--------------
T ss_pred cccCccHHHHHHHHHHHHHCCC----CCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcch--------------
Confidence 12345666666666666521 2357899999999999999999999999999999988320
Q ss_pred hhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcH
Q 017180 220 TRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSR 299 (376)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (376)
+...+... . . +.... .+ ..+.++ ..++..+.+... .
T Consensus 626 ----~~~~~~~~-~--------~---~~~~~-~~--~~~g~p--~~~~~~~~~~~~------------------s----- 661 (751)
T 2xe4_A 626 ----VMTTMCDP-S--------I---PLTTG-EW--EEWGNP--NEYKYYDYMLSY------------------S----- 661 (751)
T ss_dssp ----HHHHHTCT-T--------S---TTHHH-HT--TTTCCT--TSHHHHHHHHHH------------------C-----
T ss_pred ----HHhhhccc-C--------c---ccchh-hH--HHcCCC--CCHHHHHHHHhc------------------C-----
Confidence 00000000 0 0 00000 00 111111 111111111000 0
Q ss_pred HHHHHHHhcccCCCc-EEEEEeCCCCCCCHHHHHHHhcccC-------CceEEEeCCC-CCCCCCChH--HHHHHHHHHH
Q 017180 300 EEFLQLFADLEGKLP-LLVVSTEGSPRRSKAEMEALKGAKG-------VTKFVEVPGA-LLPQEEYPA--MVAQELYQFL 368 (376)
Q Consensus 300 ~~~~~~~~~i~~~~P-vlii~G~~D~~~~~~~~~~~~~~~~-------~~~~~~~~~~-H~~~~e~pe--~~~~~i~~fl 368 (376)
....+.++ ++| +||++|++|..++.....++.+.++ .+.+.+++++ |....+.++ +....+.+||
T Consensus 662 --p~~~~~~~--~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl 737 (751)
T 2xe4_A 662 --PMDNVRAQ--EYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFV 737 (751)
T ss_dssp --TGGGCCSS--CCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHH
T ss_pred --hhhhhccC--CCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHH
Confidence 01123445 787 9999999999999887776654322 2234555888 998766544 3456789999
Q ss_pred HhhcCC
Q 017180 369 QQTFEP 374 (376)
Q Consensus 369 ~~~~~~ 374 (376)
.+.++.
T Consensus 738 ~~~l~~ 743 (751)
T 2xe4_A 738 CKHLKS 743 (751)
T ss_dssp HHHTTC
T ss_pred HHHhCC
Confidence 987653
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.71 E-value=5.1e-16 Score=152.01 Aligned_cols=87 Identities=16% Similarity=0.070 Sum_probs=67.6
Q ss_pred HHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCC--------------CCCCCCcEEEEecc
Q 017180 112 AQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSP--------------VSSSESDLVIFGGG 177 (376)
Q Consensus 112 ~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~--------------~~~~~~~~~lvG~S 177 (376)
...|+++ ||.|+++|+||+|.|+.....+.. ..++|+.++++.+..+ ......++.++|||
T Consensus 274 ~~~la~~----GYaVv~~D~RG~G~S~G~~~~~~~-~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~S 348 (763)
T 1lns_A 274 NDYFLTR----GFASIYVAGVGTRSSDGFQTSGDY-QQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKS 348 (763)
T ss_dssp HHHHHTT----TCEEEEECCTTSTTSCSCCCTTSH-HHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEET
T ss_pred HHHHHHC----CCEEEEECCCcCCCCCCcCCCCCH-HHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEEC
Confidence 4677776 999999999999999855434443 4567777777776411 01123589999999
Q ss_pred hHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 178 HAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 178 ~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
+||.+++.+|.++|+.++++|..+|.
T Consensus 349 yGG~ial~~Aa~~p~~lkaiV~~~~~ 374 (763)
T 1lns_A 349 YLGTMAYGAATTGVEGLELILAEAGI 374 (763)
T ss_dssp HHHHHHHHHHTTTCTTEEEEEEESCC
T ss_pred HHHHHHHHHHHhCCcccEEEEEeccc
Confidence 99999999999999999999999874
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.70 E-value=3e-16 Score=151.84 Aligned_cols=231 Identities=14% Similarity=0.062 Sum_probs=137.4
Q ss_pred cCCceeEEEEecccCC---CCCCCcEEEecCCCCCccchHhHHHH-HHHHhhhCCcceEEEEeCCCCCcCCCCC-----C
Q 017180 71 KENSINIYYEKHERES---PDPSKNILMIPTISDVSTVEEWRLVA-QDIVQRVGKVNWRATIVDWPGLGYSDRP-----K 141 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~---~~~~~~vvllHG~~~~~~~~~~~~~~-~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-----~ 141 (376)
..+|.+|.+...-+.. .++.|+||++||.++......|.... ..|.++ ||.|+++|+||+|.+... .
T Consensus 456 s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~----Gy~Vv~~d~RGsg~~G~~~~~~~~ 531 (711)
T 4hvt_A 456 SFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKN----AGVSVLANIRGGGEFGPEWHKSAQ 531 (711)
T ss_dssp CTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGG----TCEEEEECCTTSSTTCHHHHHTTS
T ss_pred CCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHC----CCEEEEEeCCCCCCcchhHHHhhh
Confidence 3467777655443221 23368899999986333333444333 366666 999999999999976421 1
Q ss_pred ---CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCch
Q 017180 142 ---MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSM 218 (376)
Q Consensus 142 ---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~ 218 (376)
.....+++.+.+..+++.-. ....++.++|+|+||.+++.++.++|++++++|..+|.... ..
T Consensus 532 ~~~~~~~~~D~~aav~~L~~~~~----~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~--~~-------- 597 (711)
T 4hvt_A 532 GIKRQTAFNDFFAVSEELIKQNI----TSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDM--IR-------- 597 (711)
T ss_dssp GGGTHHHHHHHHHHHHHHHHTTS----CCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCT--TT--------
T ss_pred hccCcCcHHHHHHHHHHHHHcCC----CCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccch--hh--------
Confidence 11223444444555554421 23578999999999999999999999999999999884210 00
Q ss_pred hhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCc
Q 017180 219 ETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNS 298 (376)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (376)
..... .. ...+.. +.++ ..++..+.+....
T Consensus 598 ---------~~~~~-~~----------~~~~~~------~G~p--~~~~~~~~l~~~S---------------------- 627 (711)
T 4hvt_A 598 ---------YKEFG-AG----------HSWVTE------YGDP--EIPNDLLHIKKYA---------------------- 627 (711)
T ss_dssp ---------GGGST-TG----------GGGHHH------HCCT--TSHHHHHHHHHHC----------------------
T ss_pred ---------hhccc-cc----------hHHHHH------hCCC--cCHHHHHHHHHcC----------------------
Confidence 00000 00 000000 0111 1111111111100
Q ss_pred HHHHHHHHhcccCCC--cEEEEEeCCCCCCCHHHHHHHhccc-----CCceEEEeCCC-CCCCCC--ChHHHHHHHHHHH
Q 017180 299 REEFLQLFADLEGKL--PLLVVSTEGSPRRSKAEMEALKGAK-----GVTKFVEVPGA-LLPQEE--YPAMVAQELYQFL 368 (376)
Q Consensus 299 ~~~~~~~~~~i~~~~--Pvlii~G~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~~-H~~~~e--~pe~~~~~i~~fl 368 (376)
....+.++ ++ |+|+++|++|..+++....++.+.+ ..+++++++++ |..... +.....+.+.+||
T Consensus 628 ---P~~~v~~i--~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL 702 (711)
T 4hvt_A 628 ---PLENLSLT--QKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTFF 702 (711)
T ss_dssp ---GGGSCCTT--SCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHH
T ss_pred ---HHHHHhhc--CCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHH
Confidence 01122334 55 9999999999999887776654333 46889999998 986543 3345667788999
Q ss_pred HhhcCC
Q 017180 369 QQTFEP 374 (376)
Q Consensus 369 ~~~~~~ 374 (376)
.+.++.
T Consensus 703 ~~~Lg~ 708 (711)
T 4hvt_A 703 ANALKL 708 (711)
T ss_dssp HHHHTC
T ss_pred HHHhCC
Confidence 988754
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=8.7e-16 Score=132.55 Aligned_cols=110 Identities=10% Similarity=0.077 Sum_probs=73.6
Q ss_pred CCcEEEecCCCCCccchHhHH-------HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhC-CC
Q 017180 90 SKNILMIPTISDVSTVEEWRL-------VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINA-PD 161 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~-------~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~-l~ 161 (376)
.|.||++||++ ++...|.. +++.|.+.....+|.|+++|++|+|.+.........++..+++.+++++ ..
T Consensus 62 ~P~vv~lHG~g--~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 139 (268)
T 1jjf_A 62 YSVLYLLHGIG--GSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIADGYENFTKDLLNSLIPYIESNYS 139 (268)
T ss_dssp BCEEEEECCTT--CCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSCHHHHHHHHHHHTHHHHHHHHSC
T ss_pred ccEEEEECCCC--CCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCccccccHHHHHHHHHHHHHHHHHhhcC
Confidence 67899999999 66555543 4667766411115999999999987643211000011223444444442 22
Q ss_pred CCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 162 SPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 162 ~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.. ....+++|+|||+||.+++.++.++|++++++++++|.
T Consensus 140 ~~--~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~ 179 (268)
T 1jjf_A 140 VY--TDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAA 179 (268)
T ss_dssp BC--CSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCC
T ss_pred CC--CCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCC
Confidence 00 02468999999999999999999999999999999883
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=7e-17 Score=139.90 Aligned_cols=100 Identities=17% Similarity=0.191 Sum_probs=83.3
Q ss_pred CCcEEEecCCCCCccc-hHhH-HHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTV-EEWR-LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~-~~~~-~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
+++|||+||++ .+. ..|. .+.+.|.++ ||+|+++|+||||.++.. .+.+++++.+.++++..+
T Consensus 65 ~~pVVLvHG~~--~~~~~~w~~~l~~~L~~~----Gy~V~a~DlpG~G~~~~~---~~~~~la~~I~~l~~~~g------ 129 (316)
T 3icv_A 65 SKPILLVPGTG--TTGPQSFDSNWIPLSAQL----GYTPCWISPPPFMLNDTQ---VNTEYMVNAITTLYAGSG------ 129 (316)
T ss_dssp SSEEEEECCTT--CCHHHHHTTTHHHHHHHT----TCEEEEECCTTTTCSCHH---HHHHHHHHHHHHHHHHTT------
T ss_pred CCeEEEECCCC--CCcHHHHHHHHHHHHHHC----CCeEEEecCCCCCCCcHH---HHHHHHHHHHHHHHHHhC------
Confidence 67899999999 887 6898 899999986 899999999999987521 245566777777777775
Q ss_pred CCcEEEEecchHHHHHHHHHHhC---CCCcceEEEeccCC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKN---LVKPTAIAAVAPTW 204 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~---p~~v~~lvl~~p~~ 204 (376)
.++++||||||||.++..++..+ +++|+++|+++|..
T Consensus 130 ~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~ 169 (316)
T 3icv_A 130 NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 169 (316)
T ss_dssp SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred CCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCC
Confidence 68899999999999997777764 58999999999854
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.69 E-value=4.1e-17 Score=124.82 Aligned_cols=94 Identities=15% Similarity=0.353 Sum_probs=78.9
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
+|.+++|...|+ +++|||+| + +...|..+ |.+ +|+|+++|+||||.|+.+... .++++++
T Consensus 10 ~g~~~~~~~~g~-----~~~vv~~H--~---~~~~~~~~---l~~-----~~~v~~~d~~G~G~s~~~~~~--~~~~~~~ 69 (131)
T 2dst_A 10 YGLNLVFDRVGK-----GPPVLLVA--E---EASRWPEA---LPE-----GYAFYLLDLPGYGRTEGPRMA--PEELAHF 69 (131)
T ss_dssp TTEEEEEEEECC-----SSEEEEES--S---SGGGCCSC---CCT-----TSEEEEECCTTSTTCCCCCCC--HHHHHHH
T ss_pred CCEEEEEEEcCC-----CCeEEEEc--C---CHHHHHHH---HhC-----CcEEEEECCCCCCCCCCCCCC--HHHHHHH
Confidence 488999998885 67899999 2 22456555 665 799999999999999865443 8999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV 192 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~ 192 (376)
+.++++.++ .++++++||||||.+++.+|.++|.
T Consensus 70 ~~~~~~~~~------~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 70 VAGFAVMMN------LGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp HHHHHHHTT------CCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHHcC------CCccEEEEEChHHHHHHHHHhcCCc
Confidence 999999986 6789999999999999999999884
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.68 E-value=2.3e-16 Score=143.31 Aligned_cols=191 Identities=11% Similarity=0.055 Sum_probs=125.8
Q ss_pred CceeEEEEecccCC---CCCCCcEEEecCCCCCccchHh--HHH----------HHHHHhhhCCcceEEEEeCCCCCcCC
Q 017180 73 NSINIYYEKHERES---PDPSKNILMIPTISDVSTVEEW--RLV----------AQDIVQRVGKVNWRATIVDWPGLGYS 137 (376)
Q Consensus 73 ~g~~l~y~~~g~~~---~~~~~~vvllHG~~~~~~~~~~--~~~----------~~~L~~~~~~~~~~Vi~~D~~G~G~S 137 (376)
+|.++.|...-+.. .++.|.||++||++ .+...+ ..+ ....... ++.|+++|+||.+..
T Consensus 154 dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g--~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~vv~pd~~g~~~~ 227 (380)
T 3doh_A 154 TGVEIPYRLFVPKDVNPDRKYPLVVFLHGAG--ERGTDNYLQVAGNRGAVVWAQPRYQVVH----PCFVLAPQCPPNSSW 227 (380)
T ss_dssp TCCEEEEEEECCSSCCTTSCEEEEEEECCGG--GCSSSSSHHHHSSTTTTGGGSHHHHTTS----CCEEEEECCCTTCCS
T ss_pred CCcEEEEEEEcCCCCCCCCCccEEEEECCCC--CCCCchhhhhhccccceeecCccccccC----CEEEEEecCCCCCcc
Confidence 57888887765443 22247899999998 543221 100 1111222 689999999987654
Q ss_pred CCC----C----CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCC
Q 017180 138 DRP----K----MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLP 209 (376)
Q Consensus 138 ~~~----~----~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~ 209 (376)
... . .....++..+.+..+++..+ ....+++|+||||||.+++.++.++|++++++++++|..
T Consensus 228 ~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~----~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~----- 298 (380)
T 3doh_A 228 STLFTDRENPFNPEKPLLAVIKIIRKLLDEYN----IDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGG----- 298 (380)
T ss_dssp BTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSC----EEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCC-----
T ss_pred cccccccccccCCcchHHHHHHHHHHHHHhcC----CCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCC-----
Confidence 311 0 13344556666666666654 123579999999999999999999999999999998821
Q ss_pred cccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHh
Q 017180 210 IVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFL 289 (376)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (376)
. .
T Consensus 299 ------------------------------~-----~------------------------------------------- 300 (380)
T 3doh_A 299 ------------------------------D-----V------------------------------------------- 300 (380)
T ss_dssp ------------------------------C-----G-------------------------------------------
T ss_pred ------------------------------C-----h-------------------------------------------
Confidence 0 0
Q ss_pred hccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhc----ccCCceEEEeCCC-CCCC----CCChHHH
Q 017180 290 TGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKG----AKGVTKFVEVPGA-LLPQ----EEYPAMV 360 (376)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~-H~~~----~e~pe~~ 360 (376)
..+..+. .+|+|+++|++|..++.+..+.+.+ ...++++++++++ |..| ....+..
T Consensus 301 --------------~~~~~~~-~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~~~~~ 365 (380)
T 3doh_A 301 --------------SKVERIK-DIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGSWIPT 365 (380)
T ss_dssp --------------GGGGGGT-TSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCTHHHH
T ss_pred --------------hhhhhcc-CCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchhHHHh
Confidence 0111220 4799999999999999777666643 3446889999998 5432 2233444
Q ss_pred HH--HHHHHHHhh
Q 017180 361 AQ--ELYQFLQQT 371 (376)
Q Consensus 361 ~~--~i~~fl~~~ 371 (376)
.. .+.+||.+.
T Consensus 366 ~~~~~i~~wL~~~ 378 (380)
T 3doh_A 366 YENQEAIEWLFEQ 378 (380)
T ss_dssp HTCHHHHHHHHTC
T ss_pred cCCHHHHHHHHhh
Confidence 44 888999864
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.68 E-value=3.6e-16 Score=142.89 Aligned_cols=90 Identities=9% Similarity=0.082 Sum_probs=65.9
Q ss_pred CCcEEEecCCCCCccchH-----------hHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCC--------CHHHHH
Q 017180 90 SKNILMIPTISDVSTVEE-----------WRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDY--------NADVME 150 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~-----------~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~--------~~~~~~ 150 (376)
.|+||++||++ ++... |..++..|.++ ||+|+++|+||||.|+.+...+ ...+++
T Consensus 79 ~P~vv~~HG~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~----G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~ 152 (397)
T 3h2g_A 79 YPLLGWGHPTE--ALRAQEQAKEIRDAKGDDPLVTRLASQ----GYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDAM 152 (397)
T ss_dssp EEEEEEECCCC--CBTTCCHHHHHHHTTTCSHHHHTTGGG----TCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHH
T ss_pred CcEEEEeCCCc--CCCCcccccccccccchHHHHHHHHHC----CCEEEEecCCCCCCCCCCccchhhhhhHHHHHHHHH
Confidence 57788899999 65443 55677788776 9999999999999997443322 344455
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
+++..++++++.. ..++++|+||||||.+++.+|.
T Consensus 153 ~~~~~~~~~~~~~---~~~~i~l~G~S~GG~~a~~~a~ 187 (397)
T 3h2g_A 153 RAARSVLQHLKTP---LSGKVMLSGYSQGGHTAMATQR 187 (397)
T ss_dssp HHHHHHHHHHTCC---EEEEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCC---CCCcEEEEEECHHHHHHHHHHH
Confidence 5556677666510 1368999999999999998873
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.67 E-value=9e-17 Score=141.49 Aligned_cols=100 Identities=14% Similarity=0.260 Sum_probs=90.5
Q ss_pred CCcEEEecCCCCCccc------hHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCC
Q 017180 90 SKNILMIPTISDVSTV------EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSP 163 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~------~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~ 163 (376)
+++|||+||++ ++. ..|..+.+.|.+. ||+|+++|+||+|.|+.+ ..+.+++++++.++++.++
T Consensus 8 ~~~vVlvHG~~--~~~~~~~~~~~w~~l~~~L~~~----G~~V~~~d~~g~g~s~~~--~~~~~~l~~~i~~~l~~~~-- 77 (320)
T 1ys1_X 8 RYPIILVHGLT--GTDKYAGVLEYWYGIQEDLQQR----GATVYVANLSGFQSDDGP--NGRGEQLLAYVKTVLAATG-- 77 (320)
T ss_dssp SSCEEEECCTT--CCSEETTTEESSTTHHHHHHHT----TCCEEECCCCSSCCSSST--TSHHHHHHHHHHHHHHHHC--
T ss_pred CCEEEEECCCC--CCccccchHHHHHHHHHHHHhC----CCEEEEEcCCCCCCCCCC--CCCHHHHHHHHHHHHHHhC--
Confidence 77899999999 776 7899999999986 899999999999999754 3678899999999999986
Q ss_pred CCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 164 VSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 164 ~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.++++|+||||||.++..++.++|++|+++|++++.
T Consensus 78 ----~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p 113 (320)
T 1ys1_X 78 ----ATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTP 113 (320)
T ss_dssp ----CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ----CCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCC
Confidence 678999999999999999999999999999999874
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.2e-14 Score=130.64 Aligned_cols=106 Identities=15% Similarity=0.081 Sum_probs=67.2
Q ss_pred CCcEEEecCCCCCccc-------hHhHHHHHHHH-hhhCCcceEEEEeCCCCCcCCCCCCCCCC-HH-------HHHHHH
Q 017180 90 SKNILMIPTISDVSTV-------EEWRLVAQDIV-QRVGKVNWRATIVDWPGLGYSDRPKMDYN-AD-------VMEKFV 153 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~-------~~~~~~~~~L~-~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~-~~-------~~~~~l 153 (376)
.|.|++.||....... ..+ ..+..|. ++ ||.|+++|+||+|.|+.....+. .. +.++.+
T Consensus 74 ~PvV~~~HG~~~~~~~~ps~~~~~~~-~~~~~lal~~----Gy~Vv~~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~ 148 (377)
T 4ezi_A 74 VGIISYQHGTRFERNDVPSRNNEKNY-IYLAAYGNSA----GYMTVMPDYLGLGDNELTLHPYVQAETLASSSIDMLFAA 148 (377)
T ss_dssp EEEEEEECCCCCSTTCSGGGCCGGGH-HHHHHHTTTT----CCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCcCCcccCCCcCcccch-HHHHHHHHhC----CcEEEEeCCCCCCCCCCCCcccccchhHHHHHHHHHHHH
Confidence 5678888998721111 112 2344555 55 99999999999999985322232 11 222223
Q ss_pred HHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCC-----CcceEEEeccC
Q 017180 154 VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV-----KPTAIAAVAPT 203 (376)
Q Consensus 154 ~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~-----~v~~lvl~~p~ 203 (376)
..+++.++.. ...+++++|||+||.+++.+|..+|+ .+.+.+..++.
T Consensus 149 ~~~~~~~g~~---~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p 200 (377)
T 4ezi_A 149 KELANRLHYP---ISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAP 200 (377)
T ss_dssp HHHHHHTTCC---EEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCC
T ss_pred HHHhhccCCC---CCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcc
Confidence 3344444310 14789999999999999999886443 46777777763
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=8.2e-17 Score=148.24 Aligned_cols=110 Identities=15% Similarity=0.243 Sum_probs=87.8
Q ss_pred CCcEEEecCCCCCccc-hHhHH-HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTV-EEWRL-VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~-~~~~~-~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
+|+|||+||++ ++. ..|.. +++.|.+. .+|+||++|+||||.|+.+....+.+.+++++.++++.+.......
T Consensus 70 ~p~vvliHG~~--~~~~~~w~~~l~~~l~~~---~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~li~~L~~~~g~~ 144 (452)
T 1bu8_A 70 RKTRFIVHGFI--DKGEDGWLLDMCKKMFQV---EKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYS 144 (452)
T ss_dssp SEEEEEECCSC--CTTCTTHHHHHHHHHHTT---CCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCeEEEECCCC--CCCCchHHHHHHHHHHhh---CCCEEEEEechhcccCchhHhHhhHHHHHHHHHHHHHHHHHhcCCC
Confidence 68999999999 877 78877 66777652 1799999999999999743334556778888888888871000012
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
.++++|+||||||.+|+.+|.++|++|.++|+++|..
T Consensus 145 ~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 145 PENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred ccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 4789999999999999999999999999999998853
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.63 E-value=9.3e-17 Score=147.05 Aligned_cols=109 Identities=17% Similarity=0.222 Sum_probs=84.3
Q ss_pred CCcEEEecCCCCCccc-hHhHH-HHHHHH-hhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTV-EEWRL-VAQDIV-QRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSS 166 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~-~~~~~-~~~~L~-~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 166 (376)
+|+||||||++ ++. ..|.. +++.|. .. +|+||++|+||||.|..+...++.+.+++++.++++.+......
T Consensus 69 ~p~vvliHG~~--~s~~~~w~~~l~~~ll~~~----~~~VI~vD~~g~g~s~y~~~~~~~~~v~~~la~ll~~L~~~~g~ 142 (449)
T 1hpl_A 69 RKTRFIIHGFI--DKGEESWLSTMCQNMFKVE----SVNCICVDWKSGSRTAYSQASQNVRIVGAEVAYLVGVLQSSFDY 142 (449)
T ss_dssp SEEEEEECCCC--CTTCTTHHHHHHHHHHHHC----CEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCeEEEEecCC--CCCCccHHHHHHHHHHhcC----CeEEEEEeCCcccCCccHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 67899999999 774 57876 667663 32 79999999999999863323355667777888877765100001
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
..++++||||||||.+|+.+|.++|++|.++++++|..
T Consensus 143 ~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 143 SPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAE 180 (449)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CcccEEEEEECHhHHHHHHHHHhcchhcceeeccCccc
Confidence 25789999999999999999999999999999998854
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.5e-15 Score=127.43 Aligned_cols=183 Identities=11% Similarity=0.098 Sum_probs=118.5
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC--------------cCCC-CCC------CCCCHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL--------------GYSD-RPK------MDYNADV 148 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~--------------G~S~-~~~------~~~~~~~ 148 (376)
+.+|||+||+| ++...|..+++.|..... ++++++|+-|-. .... .+. ....+..
T Consensus 37 ~~~VI~LHG~G--~~~~dl~~l~~~l~~~~~--~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~ 112 (246)
T 4f21_A 37 RFCVIWLHGLG--ADGHDFVDIVNYFDVSLD--EIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANSLNRVVDVEGINS 112 (246)
T ss_dssp CEEEEEEEC----CCCCCGGGGGGGCCSCCT--TEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---CGGGGSCCC-CHH
T ss_pred CeEEEEEcCCC--CCHHHHHHHHHHhhhcCC--CeEEEeCCCCccccccCCCCCcccccccccccccchhhhhhHHHHHH
Confidence 66899999999 888888888777764322 689999875421 1111 000 1123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
.++.+..+++..... ....++++++|+|+||.+++.++.++|+.+.+++.+++.. |.
T Consensus 113 ~~~~i~~li~~~~~~-gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~l----p~------------------ 169 (246)
T 4f21_A 113 SIAKVNKLIDSQVNQ-GIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYL----PA------------------ 169 (246)
T ss_dssp HHHHHHHHHHHHHHC--CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCC----TT------------------
T ss_pred HHHHHHHHHHHHHHc-CCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhcc----Cc------------------
Confidence 455555555432100 1246789999999999999999999999999999998721 00
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
... +... . ... .
T Consensus 170 -----------------~~~----~~~~-~--------------------------------------------~~~--~ 181 (246)
T 4f21_A 170 -----------------WDN----FKGK-I--------------------------------------------TSI--N 181 (246)
T ss_dssp -----------------HHH----HSTT-C--------------------------------------------CGG--G
T ss_pred -----------------ccc----cccc-c--------------------------------------------ccc--c
Confidence 000 0000 0 000 0
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHh----cccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALK----GAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
- ++|++++||++|+++|.+..+.+. +..-+++++++++. |... +++ .+.+.+||++.++
T Consensus 182 ~--~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~---~~~-l~~~~~fL~k~l~ 245 (246)
T 4f21_A 182 K--GLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVC---MEE-IKDISNFIAKTFK 245 (246)
T ss_dssp T--TCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCC---HHH-HHHHHHHHHHHTT
T ss_pred c--CCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccC---HHH-HHHHHHHHHHHhC
Confidence 1 679999999999999988766553 34456889999997 9753 444 4678999999875
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.63 E-value=2.3e-16 Score=137.22 Aligned_cols=97 Identities=9% Similarity=0.126 Sum_probs=87.0
Q ss_pred CCcEEEecCCCCCccc-----hHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCC
Q 017180 90 SKNILMIPTISDVSTV-----EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPV 164 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~-----~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~ 164 (376)
+++|||+||++ ++. ..|..+.+.|.+. ||+|+++|+||+|.|+ .+.+++++++.++++.++
T Consensus 7 ~~~vvlvHG~~--~~~~~~~~~~~~~~~~~L~~~----G~~v~~~d~~g~g~s~-----~~~~~~~~~i~~~~~~~~--- 72 (285)
T 1ex9_A 7 KYPIVLAHGML--GFDNILGVDYWFGIPSALRRD----GAQVYVTEVSQLDTSE-----VRGEQLLQQVEEIVALSG--- 72 (285)
T ss_dssp SSCEEEECCTT--CCSEETTEESSTTHHHHHHHT----TCCEEEECCCSSSCHH-----HHHHHHHHHHHHHHHHHC---
T ss_pred CCeEEEeCCCC--CCccccccccHHHHHHHHHhC----CCEEEEEeCCCCCCch-----hhHHHHHHHHHHHHHHhC---
Confidence 78899999998 653 4899999999986 8999999999999875 457889999999999886
Q ss_pred CCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 165 SSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 165 ~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.++++|+||||||.+++.++.++|++|+++|++++.
T Consensus 73 ---~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p 108 (285)
T 1ex9_A 73 ---QPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAP 108 (285)
T ss_dssp ---CSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ---CCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCC
Confidence 678999999999999999999999999999999873
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-16 Score=147.02 Aligned_cols=110 Identities=15% Similarity=0.188 Sum_probs=87.6
Q ss_pred CCcEEEecCCCCCccc-hHhHH-HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTV-EEWRL-VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~-~~~~~-~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
+|+|||+||++ ++. ..|.. +++.|.+. .+|+|+++|+||||.|+.+....+.+.+++++.++++.+.......
T Consensus 70 ~p~vvliHG~~--~~~~~~w~~~~~~~l~~~---~~~~Vi~~D~~g~G~S~~~~~~~~~~~~~~dl~~~i~~L~~~~g~~ 144 (452)
T 1w52_X 70 RKTHFVIHGFR--DRGEDSWPSDMCKKILQV---ETTNCISVDWSSGAKAEYTQAVQNIRIVGAETAYLIQQLLTELSYN 144 (452)
T ss_dssp SCEEEEECCTT--CCSSSSHHHHHHHHHHTT---SCCEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCEEEEEcCCC--CCCCchHHHHHHHHHHhh---CCCEEEEEecccccccccHHHHHhHHHHHHHHHHHHHHHHHhcCCC
Confidence 68999999999 777 67877 77777652 1799999999999999743334556778888888888772000012
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
.++++|+||||||.+|+.+|.++|++|.++|+++|..
T Consensus 145 ~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 145 PENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred cccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 5789999999999999999999999999999998853
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.4e-16 Score=140.82 Aligned_cols=103 Identities=10% Similarity=0.135 Sum_probs=87.1
Q ss_pred CCcEEEecCCCCCc----------cchHh----HHHHHHHHhhhCCcceE---EEEeCCCCCcCCCCCC----CCCCHHH
Q 017180 90 SKNILMIPTISDVS----------TVEEW----RLVAQDIVQRVGKVNWR---ATIVDWPGLGYSDRPK----MDYNADV 148 (376)
Q Consensus 90 ~~~vvllHG~~~~~----------~~~~~----~~~~~~L~~~~~~~~~~---Vi~~D~~G~G~S~~~~----~~~~~~~ 148 (376)
+++|||+||++ . +...| +.+++.|.++ ||+ |+++|+||+|.|+.+. ..+..++
T Consensus 40 ~~pVVlvHG~~--~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~----Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~~~~~ 113 (342)
T 2x5x_A 40 KTPVIFIHGNG--DNAISFDMPPGNVSGYGTPARSVYAELKAR----GYNDCEIFGVTYLSSSEQGSAQYNYHSSTKYAI 113 (342)
T ss_dssp SCCEEEECCTT--CCGGGGGCCCCCCTTTCCCSSCHHHHHHHT----TCCTTSEEEECCSCHHHHTCGGGCCBCHHHHHH
T ss_pred CCeEEEECCcC--CCcccccccccccccccccHHHHHHHHHhC----CCCCCeEEEEeCCCCCccCCccccCCHHHHHHH
Confidence 67899999999 6 45688 8899999886 898 9999999999987542 3345667
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhC--CCCcceEEEeccCC
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKN--LVKPTAIAAVAPTW 204 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~--p~~v~~lvl~~p~~ 204 (376)
+++++.+++++++ .++++||||||||.+++.++.++ |++|+++|+++|..
T Consensus 114 l~~~I~~l~~~~g------~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~ 165 (342)
T 2x5x_A 114 IKTFIDKVKAYTG------KSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGI 165 (342)
T ss_dssp HHHHHHHHHHHHT------CSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCT
T ss_pred HHHHHHHHHHHhC------CCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCc
Confidence 7777777777775 67899999999999999999988 89999999999864
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.3e-16 Score=145.28 Aligned_cols=102 Identities=6% Similarity=0.188 Sum_probs=85.6
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcce---EEEEeCCCCCcCC-----CCC---------------------
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNW---RATIVDWPGLGYS-----DRP--------------------- 140 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~---~Vi~~D~~G~G~S-----~~~--------------------- 140 (376)
+++|||+||++ ++...|..++..|.+. || +|+++|+||||.| +..
T Consensus 22 ~ppVVLlHG~g--~s~~~w~~la~~La~~----Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l 95 (484)
T 2zyr_A 22 FRPVVFVHGLA--GSAGQFESQGMRFAAN----GYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETL 95 (484)
T ss_dssp CCCEEEECCTT--CCGGGGHHHHHHHHHT----TCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHH
T ss_pred CCEEEEECCCC--CCHHHHHHHHHHHHHc----CCCcceEEEEECCCCCccccccccccccccccccccccccccccccc
Confidence 67899999999 9999999999999986 89 8999999999987 210
Q ss_pred ----------CCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCC---CCcceEEEeccC
Q 017180 141 ----------KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNL---VKPTAIAAVAPT 203 (376)
Q Consensus 141 ----------~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p---~~v~~lvl~~p~ 203 (376)
....+.+++++++.+++++++ .++++++||||||.+++.++.++| ++|+++|+++|.
T Consensus 96 ~~v~~~~~~~~~~~~~~dla~~L~~ll~~lg------~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp 165 (484)
T 2zyr_A 96 DKILSKSRERLIDETFSRLDRVIDEALAESG------ADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGV 165 (484)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHC------CSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCC
T ss_pred cccccccccCchhhhHHHHHHHHHHHHHHhC------CCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCc
Confidence 112345566677777888775 678999999999999999999998 489999999984
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.9e-16 Score=145.44 Aligned_cols=109 Identities=17% Similarity=0.240 Sum_probs=87.4
Q ss_pred CCcEEEecCCCCCccc-hHhHH-HHHHHHh-hhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTV-EEWRL-VAQDIVQ-RVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSS 166 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~-~~~~~-~~~~L~~-~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 166 (376)
+++|||+||++ ++. ..|.. +.+.|.+ . +|+|+++|+||||.|..+....+.+.+++|+.++++.+......
T Consensus 70 ~~~vvllHG~~--~s~~~~w~~~~~~~l~~~~----~~~Vi~~D~~g~g~s~~~~~~~~~~~~~~dl~~~i~~l~~~~g~ 143 (432)
T 1gpl_A 70 RKTRFIIHGFT--DSGENSWLSDMCKNMFQVE----KVNCICVDWKGGSKAQYSQASQNIRVVGAEVAYLVQVLSTSLNY 143 (432)
T ss_dssp SEEEEEECCTT--CCTTSHHHHHHHHHHHHHC----CEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCeEEEECCCC--CCCCchHHHHHHHHHHhcC----CcEEEEEECccccCccchhhHhhHHHHHHHHHHHHHHHHHhcCC
Confidence 68899999999 887 68877 7788875 3 89999999999999874333445677778888888776210001
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
..++++|+||||||.+|+.+|.++|+++.++++++|..
T Consensus 144 ~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 144 APENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred CcccEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 25789999999999999999999999999999998853
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.59 E-value=4e-16 Score=142.94 Aligned_cols=109 Identities=17% Similarity=0.235 Sum_probs=83.8
Q ss_pred CCcEEEecCCCCCccch-HhHH-HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVE-EWRL-VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~-~~~~-~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
+|+||||||++ ++.. .|.. +.+.|.+. .+|+||++|+||+|.|..+...++.+.+++++.++++.+.......
T Consensus 70 ~p~vvliHG~~--~s~~~~w~~~l~~~ll~~---~~~~VI~vD~~g~g~s~y~~~~~~~~~~a~~l~~ll~~L~~~~g~~ 144 (450)
T 1rp1_A 70 KKTRFIIHGFI--DKGEENWLLDMCKNMFKV---EEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYS 144 (450)
T ss_dssp SEEEEEECCCC--CTTCTTHHHHHHHHHTTT---CCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCeEEEEccCC--CCCCcchHHHHHHHHHhc---CCeEEEEEeCccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 67899999999 7764 7866 55565431 1699999999999988633334567778888888887661000012
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
.++++||||||||.+|+.+|.++|+ |.++++++|..
T Consensus 145 ~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~ 180 (450)
T 1rp1_A 145 PSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVE 180 (450)
T ss_dssp GGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCC
T ss_pred hhhEEEEEECHhHHHHHHHHHhcCC-cccccccCccc
Confidence 5789999999999999999999999 99999999854
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1.2e-14 Score=138.67 Aligned_cols=122 Identities=14% Similarity=0.041 Sum_probs=86.2
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHH---HH-HHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRL---VA-QDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADV 148 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~---~~-~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~ 148 (376)
||.+|++....+...++.|.||++||++ .....+.. .. ..|+++ ||.|+++|+||+|.|+.....+ ..
T Consensus 18 DG~~L~~~~~~P~~~~~~P~vv~~~~~g--~~~~~~~~y~~~~~~~la~~----Gy~vv~~D~RG~G~S~g~~~~~--~~ 89 (587)
T 3i2k_A 18 DGVRLAVDLYRPDADGPVPVLLVRNPYD--KFDVFAWSTQSTNWLEFVRD----GYAVVIQDTRGLFASEGEFVPH--VD 89 (587)
T ss_dssp TSCEEEEEEEEECCSSCEEEEEEEESSC--TTCHHHHHTTTCCTHHHHHT----TCEEEEEECTTSTTCCSCCCTT--TT
T ss_pred CCCEEEEEEEECCCCCCeeEEEEECCcC--CCccccccchhhHHHHHHHC----CCEEEEEcCCCCCCCCCccccc--cc
Confidence 4777776655433222257788889988 66543322 23 677776 9999999999999998543322 23
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
..+|+.++++.+..+. ....++.++|+||||.+++.+|.++|+.++++|.+++.
T Consensus 90 ~~~D~~~~i~~l~~~~-~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~ 143 (587)
T 3i2k_A 90 DEADAEDTLSWILEQA-WCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMAS 143 (587)
T ss_dssp HHHHHHHHHHHHHHST-TEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCC
T ss_pred hhHHHHHHHHHHHhCC-CCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCc
Confidence 4566666655543110 12468999999999999999999999999999999875
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.1e-14 Score=131.13 Aligned_cols=110 Identities=11% Similarity=0.029 Sum_probs=83.2
Q ss_pred CCcEEEecCCCCCccchHhH---HHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC----------CCCCHHHHHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWR---LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK----------MDYNADVMEKFVVDL 156 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~---~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~----------~~~~~~~~~~~l~~~ 156 (376)
+.||||+||.. ++...+. .....|++.. +++|+++|+||||+|.+.. ...+.+++++|+..+
T Consensus 38 g~Pi~l~~Gge--g~~~~~~~~~g~~~~lA~~~---~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~ 112 (446)
T 3n2z_B 38 GGSILFYTGNE--GDIIWFCNNTGFMWDVAEEL---KAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAEL 112 (446)
T ss_dssp TCEEEEEECCS--SCHHHHHHHCHHHHHHHHHH---TEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHH
T ss_pred CCCEEEEeCCC--CcchhhhhcccHHHHHHHHh---CCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHH
Confidence 55799999988 6554332 3455666642 6899999999999996321 124789999999999
Q ss_pred HhCCCCCC-CCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 157 INAPDSPV-SSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 157 l~~l~~~~-~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
+++++... .....+++++||||||.+|+.++.++|+.|.++|+.++..
T Consensus 113 ~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv 161 (446)
T 3n2z_B 113 IKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPI 161 (446)
T ss_dssp HHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred HHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccch
Confidence 98875210 0123589999999999999999999999999999987543
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.1e-13 Score=133.15 Aligned_cols=127 Identities=11% Similarity=0.006 Sum_probs=85.0
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccc-------hHhHH-HH---HHHHhhhCCcceEEEEeCCCCCcCCCCC
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTV-------EEWRL-VA---QDIVQRVGKVNWRATIVDWPGLGYSDRP 140 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~-------~~~~~-~~---~~L~~~~~~~~~~Vi~~D~~G~G~S~~~ 140 (376)
.||.+|++....+...++.|.||++||++ ... ..|.. +. ..|+++ ||.|+++|+||+|.|+..
T Consensus 33 ~DG~~L~~~~~~P~~~~~~P~vl~~hgyg--~~~~~~~~~~~~~~~~~~~~~~~la~~----Gy~Vv~~D~RG~g~S~g~ 106 (615)
T 1mpx_A 33 RDGVKLHTVIVLPKGAKNAPIVLTRTPYD--ASGRTERLASPHMKDLLSAGDDVFVEG----GYIRVFQDVRGKYGSEGD 106 (615)
T ss_dssp TTSCEEEEEEEEETTCCSEEEEEEEESSC--HHHHTCSSCCSSHHHHSCGGGHHHHHT----TCEEEEEECTTSTTCCSC
T ss_pred CCCCEEEEEEEeCCCCCCeeEEEEEcCCC--CccccccccccccccccchhHHHHHhC----CeEEEEECCCCCCCCCCc
Confidence 35777776655443222246778889988 643 13332 22 677776 999999999999999844
Q ss_pred CCCCC------HH---HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 141 KMDYN------AD---VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 141 ~~~~~------~~---~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
..... .. ...+|+.++++.+..+......++.++|||+||.+++.+|..+|+.++++|.+++..
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~ 179 (615)
T 1mpx_A 107 YVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMI 179 (615)
T ss_dssp CCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCC
T ss_pred cccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCcc
Confidence 32221 01 345566655554431100023489999999999999999998899999999998853
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=4.2e-13 Score=116.43 Aligned_cols=105 Identities=10% Similarity=0.114 Sum_probs=76.5
Q ss_pred CcEEEecCCCCCccchHhHHHH---HHHHhhhCCcceEEEEeCCCCC-cCCC--CCC------CCCCHHHH-HHHHHHHH
Q 017180 91 KNILMIPTISDVSTVEEWRLVA---QDIVQRVGKVNWRATIVDWPGL-GYSD--RPK------MDYNADVM-EKFVVDLI 157 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~---~~L~~~~~~~~~~Vi~~D~~G~-G~S~--~~~------~~~~~~~~-~~~l~~~l 157 (376)
++|||+||+++..+...|..+. +.+.+. ++.|+++|.+|. +.++ .+. ..+..+++ ++++..++
T Consensus 30 ~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~----~~~vv~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i 105 (280)
T 1dqz_A 30 HAVYLLDGLRAQDDYNGWDINTPAFEEYYQS----GLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWL 105 (280)
T ss_dssp SEEEECCCTTCCSSSCHHHHHSCHHHHHTTS----SSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHH
T ss_pred CEEEEECCCCCCCCcccccccCcHHHHHhcC----CeEEEEECCCCCccccCCCCCCccccccccccHHHHHHHHHHHHH
Confidence 5899999995114777786543 456554 899999998864 2232 111 13455554 47888888
Q ss_pred hC-CCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 158 NA-PDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 158 ~~-l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
++ ++. ..++++|+||||||.+|+.+|.++|++++++++++|.
T Consensus 106 ~~~~~~----~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~ 148 (280)
T 1dqz_A 106 QANKGV----SPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGF 148 (280)
T ss_dssp HHHHCC----CSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCC
T ss_pred HHHcCC----CCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCc
Confidence 76 541 1358999999999999999999999999999999985
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.54 E-value=7e-13 Score=116.44 Aligned_cols=106 Identities=13% Similarity=0.097 Sum_probs=76.3
Q ss_pred CCcEEEecCCCCCccchHhHHH---HHHHHhhhCCcceEEEEeCCCCC-cCCCC--CC------CCCCHHHH-HHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLV---AQDIVQRVGKVNWRATIVDWPGL-GYSDR--PK------MDYNADVM-EKFVVDL 156 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~---~~~L~~~~~~~~~~Vi~~D~~G~-G~S~~--~~------~~~~~~~~-~~~l~~~ 156 (376)
.|+|||+||++...+...|... ...+.+. ++.|+++|.++. +.++. +. .....+++ ++++..+
T Consensus 34 ~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~----~~~vv~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~ 109 (304)
T 1sfr_A 34 SPALYLLDGLRAQDDFSGWDINTPAFEWYDQS----GLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGW 109 (304)
T ss_dssp BCEEEEECCTTCCSSSCHHHHHCCHHHHHTTS----SCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHH
T ss_pred CCEEEEeCCCCCCCCcchhhcCCCHHHHHhcC----CeEEEEECCCCCccccccCCccccccccccccHHHHHHHHHHHH
Confidence 6789999999311667777654 3555554 899999999775 22221 10 13455554 4677777
Q ss_pred HhC-CCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 157 INA-PDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 157 l~~-l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
+++ ++ ...++++|+|+||||.+|+.++.++|+++++++++++.
T Consensus 110 i~~~~~----~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~ 153 (304)
T 1sfr_A 110 LQANRH----VKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGL 153 (304)
T ss_dssp HHHHHC----BCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred HHHHCC----CCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCc
Confidence 766 33 12348999999999999999999999999999999884
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.54 E-value=2.5e-13 Score=117.80 Aligned_cols=106 Identities=7% Similarity=0.060 Sum_probs=76.2
Q ss_pred CCcEEEecCCCCCccchHhHH---HHHHHHhhhCCcceEEEEeCCCCCc-CCCC-CCCCCCH-HHHHHHHHHHHhC-CCC
Q 017180 90 SKNILMIPTISDVSTVEEWRL---VAQDIVQRVGKVNWRATIVDWPGLG-YSDR-PKMDYNA-DVMEKFVVDLINA-PDS 162 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~---~~~~L~~~~~~~~~~Vi~~D~~G~G-~S~~-~~~~~~~-~~~~~~l~~~l~~-l~~ 162 (376)
.|+|||+||++...+...|.. +...+.+. ++.|+++|.++.+ .++. ....... +.+++++..++++ ++
T Consensus 34 ~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~----~~~vv~pd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~- 108 (280)
T 1r88_A 34 PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGK----GISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDWLAANRG- 108 (280)
T ss_dssp SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTS----SSEEEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHHHHHHHSC-
T ss_pred CCEEEEECCCCCCCChhhhhhcccHHHHHhcC----CeEEEEECCCCCCccCCCCCCCCCcHHHHHHHHHHHHHHHHCC-
Confidence 368999999952256667765 44556664 8999999997653 2221 1111233 3356678888876 54
Q ss_pred CCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 163 PVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 163 ~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
...++++|+|+||||.+|+.+|.++|++++++++++|.
T Consensus 109 ---~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~ 146 (280)
T 1r88_A 109 ---LAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGF 146 (280)
T ss_dssp ---CCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred ---CCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCc
Confidence 12358999999999999999999999999999999884
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.53 E-value=4e-16 Score=141.65 Aligned_cols=105 Identities=8% Similarity=0.085 Sum_probs=78.3
Q ss_pred CCcEEEecCCCCCc------cchHhH----HHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC------------------
Q 017180 90 SKNILMIPTISDVS------TVEEWR----LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK------------------ 141 (376)
Q Consensus 90 ~~~vvllHG~~~~~------~~~~~~----~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~------------------ 141 (376)
+++|||+||+++.. ....|. .+++.|.+. ||+|+++|+||||.|..+.
T Consensus 52 ~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~----Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~ 127 (431)
T 2hih_A 52 KDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKA----GYETYEASVSALASNHERAVELYYYLKGGRVDYGAAH 127 (431)
T ss_dssp SSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHT----TCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHH
T ss_pred CCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhC----CCEEEEEcCCCCCCCccchHHhhhhhhhccccccccc
Confidence 77899999998221 135674 588999876 8999999999999886210
Q ss_pred -CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh--------------------------CCCCc
Q 017180 142 -MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK--------------------------NLVKP 194 (376)
Q Consensus 142 -~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--------------------------~p~~v 194 (376)
..++.+.+++++.+++++++ ..++++||||||||.+++.+|.. +|++|
T Consensus 128 ~~~~~~~~~a~dl~~ll~~l~-----~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V 202 (431)
T 2hih_A 128 SEKYGHERYGKTYEGVLKDWK-----PGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMV 202 (431)
T ss_dssp HHHHTCCSEEEEECCSCTTCB-----TTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCE
T ss_pred cccCCHHHHHHHHHHHHHHhC-----CCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccce
Confidence 01233334445555666654 24789999999999999998876 78999
Q ss_pred ceEEEeccC
Q 017180 195 TAIAAVAPT 203 (376)
Q Consensus 195 ~~lvl~~p~ 203 (376)
.++|++++.
T Consensus 203 ~slv~i~tP 211 (431)
T 2hih_A 203 TSITTIATP 211 (431)
T ss_dssp EEEEEESCC
T ss_pred eEEEEECCC
Confidence 999999874
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.48 E-value=1.4e-12 Score=125.76 Aligned_cols=127 Identities=13% Similarity=0.025 Sum_probs=82.6
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccc-----h---HhHHH---H-HHHHhhhCCcceEEEEeCCCCCcCCCC
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTV-----E---EWRLV---A-QDIVQRVGKVNWRATIVDWPGLGYSDR 139 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~-----~---~~~~~---~-~~L~~~~~~~~~~Vi~~D~~G~G~S~~ 139 (376)
.||.+|+....-+...++.|.||++||++ ... . .|... . ..|+++ ||.|+.+|+||+|.|..
T Consensus 45 ~DG~~L~~~l~~P~~~~~~PvIl~~hpyg--~~~~~~~~~~~~~~~~~~~~~~~~la~~----GyaVv~~D~RG~g~S~g 118 (652)
T 2b9v_A 45 RDGVKLYTVIVIPKNARNAPILLTRTPYN--AKGRANRVPNALTMREVLPQGDDVFVEG----GYIRVFQDIRGKYGSQG 118 (652)
T ss_dssp TTSCEEEEEEEEETTCCSEEEEEEEESSC--HHHHTCSSTTCSSHHHHSCGGGHHHHHT----TCEEEEEECTTSTTCCS
T ss_pred CCCcEEEEEEEecCCCCCccEEEEECCCC--CCcccccccccccccccccchHHHHHhC----CCEEEEEecCcCCCCCC
Confidence 45777766544332212246778889988 541 1 12221 2 677776 99999999999999984
Q ss_pred CCCCC-------CH--HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 140 PKMDY-------NA--DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 140 ~~~~~-------~~--~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
..... .. ....+|+.++++.+..+......++.++|+|+||.+++.+|.++|+.++++|.+++..
T Consensus 119 ~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~ 192 (652)
T 2b9v_A 119 DYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMV 192 (652)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECC
T ss_pred cccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEeccccc
Confidence 32222 10 1344555555544421100123589999999999999999998999999999998753
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.44 E-value=3.4e-13 Score=120.74 Aligned_cols=98 Identities=11% Similarity=0.054 Sum_probs=69.9
Q ss_pred CCcEEEecCCCCCccc-------hHhHHH----HHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHH---
Q 017180 90 SKNILMIPTISDVSTV-------EEWRLV----AQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVD--- 155 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~-------~~~~~~----~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~--- 155 (376)
++||||+||++ ++. ..|..+ ++.|.+. ||+|+++|+||||.|... .+++.+.+..
T Consensus 6 ~~pVVLvHG~~--g~~~~~~~~~~yW~~~~~~la~~L~~~----G~~Via~Dl~g~G~s~~~-----a~~l~~~i~~~~v 74 (387)
T 2dsn_A 6 DAPIVLLHGFT--GWGREEMFGFKYWGGVRGDIEQWLNDN----GYRTYTLAVGPLSSNWDR-----ACEAYAQLVGGTV 74 (387)
T ss_dssp CCCEEEECCSS--CCCTTSGGGCCTTTTTTCCHHHHHHHT----TCCEEEECCCSSBCHHHH-----HHHHHHHHHCEEE
T ss_pred CCcEEEECCCC--CCCcccccccchhhhhhHHHHHHHHHC----CCEEEEecCCCCCCcccc-----HHHHHHHHHhhhh
Confidence 67899999998 543 347644 4888876 899999999999977421 1122222221
Q ss_pred ---------------------HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh-------------------CC----
Q 017180 156 ---------------------LINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK-------------------NL---- 191 (376)
Q Consensus 156 ---------------------~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~-------------------~p---- 191 (376)
+++++. ..++++||||||||.++..++.. +|
T Consensus 75 Dy~~~~a~~~~~~~~~~~l~~ll~~~~-----~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g 149 (387)
T 2dsn_A 75 DYGAAHAAKHGHARFGRTYPGLLPELK-----RGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEG 149 (387)
T ss_dssp ECCHHHHHHHTSCSEEEEECCSCGGGG-----TTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTC
T ss_pred hhhhhhhhhccchhhhhhHHHHHHHhc-----CCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccc
Confidence 112211 25789999999999999999972 36
Q ss_pred --CCcceEEEeccC
Q 017180 192 --VKPTAIAAVAPT 203 (376)
Q Consensus 192 --~~v~~lvl~~p~ 203 (376)
++|.++|++++.
T Consensus 150 ~~~~V~sLV~i~tP 163 (387)
T 2dsn_A 150 GHHFVLSVTTIATP 163 (387)
T ss_dssp CCCCEEEEEEESCC
T ss_pred cccceeEEEEECCC
Confidence 789999999874
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.1e-12 Score=123.80 Aligned_cols=123 Identities=11% Similarity=0.019 Sum_probs=86.2
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccch--------Hh---------------HHHHHHHHhhhCCcceEEEEe
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVE--------EW---------------RLVAQDIVQRVGKVNWRATIV 129 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~--------~~---------------~~~~~~L~~~~~~~~~~Vi~~ 129 (376)
||++|+....-+...++-|+||+.||++ .... .| ......|+++ ||.|+++
T Consensus 50 DG~~L~a~l~~P~~~~~~P~vl~~~pyg--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~----Gy~vv~~ 123 (560)
T 3iii_A 50 DGEKLYINIFRPNKDGKFPVVMSADTYG--KDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPN----DYVVVKV 123 (560)
T ss_dssp TSCEEEEEEEECSSSSCEEEEEEEESSC--TTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGG----TCEEEEE
T ss_pred CCcEEEEEEEecCCCCCCCEEEEecCCC--CCcccccccccccccccccccccccccccCCCHHHHHhC----CCEEEEE
Confidence 5777766555433222257888889999 5421 11 0125678887 9999999
Q ss_pred CCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 130 DWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 130 D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
|+||+|.|+.....+. ....+|+.++++.+..+. ....++.++|+|+||.+++.+|.++|+.++++|..+|.
T Consensus 124 D~RG~G~S~G~~~~~~-~~~~~D~~~~i~~l~~~~-~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~ 195 (560)
T 3iii_A 124 ALRGSDKSKGVLSPWS-KREAEDYYEVIEWAANQS-WSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGL 195 (560)
T ss_dssp ECTTSTTCCSCBCTTS-HHHHHHHHHHHHHHHTST-TEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCC
T ss_pred cCCCCCCCCCccccCC-hhHHHHHHHHHHHHHhCC-CCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCc
Confidence 9999999985433332 344566666655543111 11368999999999999999999999999999999874
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.1e-11 Score=109.55 Aligned_cols=94 Identities=7% Similarity=0.097 Sum_probs=75.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+++|+|+||++ ++...|..+...| +++|+++|+|+ +. ...+++++++++.+.++.+. ..+
T Consensus 46 ~~~l~~~hg~~--g~~~~~~~~~~~l-------~~~v~~~~~~~----~~--~~~~~~~~a~~~~~~i~~~~-----~~~ 105 (316)
T 2px6_A 46 ERPLFLVHPIE--GSTTVFHSLASRL-------SIPTYGLQCTR----AA--PLDSIHSLAAYYIDCIRQVQ-----PEG 105 (316)
T ss_dssp SCCEEEECCTT--CCSGGGHHHHHHC-------SSCEEEECCCT----TS--CTTCHHHHHHHHHHHHTTTC-----SSC
T ss_pred CCeEEEECCCC--CCHHHHHHHHHhc-------CCCEEEEECCC----CC--CcCCHHHHHHHHHHHHHHhC-----CCC
Confidence 67899999999 8889998776654 27999999993 21 24689999999999998875 247
Q ss_pred cEEEEecchHHHHHHHHHHhC---CCC---cceEEEeccC
Q 017180 170 DLVIFGGGHAATLTVRAAKKN---LVK---PTAIAAVAPT 203 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~---p~~---v~~lvl~~p~ 203 (376)
+++++||||||.+|..+|.+. ++. +.+++++++.
T Consensus 106 ~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~ 145 (316)
T 2px6_A 106 PYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 145 (316)
T ss_dssp CCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCS
T ss_pred CEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCC
Confidence 899999999999999999864 345 8899998864
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.40 E-value=5.9e-13 Score=121.11 Aligned_cols=106 Identities=18% Similarity=0.161 Sum_probs=75.0
Q ss_pred CCcEEEecCCCCCccchHh--------------H----HHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC-----CCCH
Q 017180 90 SKNILMIPTISDVSTVEEW--------------R----LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM-----DYNA 146 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~--------------~----~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~-----~~~~ 146 (376)
.|.||++||++ ++...+ + .++..|+++ ||.|+++|+||||.|..+.. .+..
T Consensus 114 ~P~Vl~~HG~g--~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~----G~~Vl~~D~rg~G~s~~~~~~~~~~~~~~ 187 (391)
T 3g8y_A 114 VPGVLCIPGSG--RTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKE----GYVAVAVDNAAAGEASDLECYDKGWNYDY 187 (391)
T ss_dssp EEEEEEECCTT--CCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTT----TCEEEECCCTTSGGGCSSGGGTTTTSCCH
T ss_pred CCEEEEeCCCC--CCchhhccccccccccchhhcchHHHHHHHHHHC----CCEEEEecCCCccccCCcccccccccchH
Confidence 67899999998 665422 2 567888887 99999999999999984421 1344
Q ss_pred HHHH---------------HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 147 DVME---------------KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 147 ~~~~---------------~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
+.++ .|+..+++.+.....+...++.++||||||.+++.+|... ++++++|++++
T Consensus 188 ~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~~-~~i~a~v~~~~ 257 (391)
T 3g8y_A 188 DVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVLD-KDIYAFVYNDF 257 (391)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHHC-TTCCEEEEESC
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHcC-CceeEEEEccC
Confidence 3333 4555455444321112246799999999999999988764 57899998876
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.32 E-value=5.4e-12 Score=115.00 Aligned_cols=123 Identities=15% Similarity=0.114 Sum_probs=79.1
Q ss_pred CceeEEEEecccCC-CCCCCcEEEecCCCCCccchHhH------------------HHHHHHHhhhCCcceEEEEeCCCC
Q 017180 73 NSINIYYEKHERES-PDPSKNILMIPTISDVSTVEEWR------------------LVAQDIVQRVGKVNWRATIVDWPG 133 (376)
Q Consensus 73 ~g~~l~y~~~g~~~-~~~~~~vvllHG~~~~~~~~~~~------------------~~~~~L~~~~~~~~~~Vi~~D~~G 133 (376)
+|.++.....-+.. .++.|.||++||.+ .+...+. .++..|+++ ||.|+++|+||
T Consensus 101 ~g~~l~~~l~~P~~~~~~~P~Vv~~HG~g--~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~----Gy~Vl~~D~rG 174 (398)
T 3nuz_A 101 PKCVSTFLVLIPDNINKPVPAILCIPGSG--GNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKE----GYIAVAVDNPA 174 (398)
T ss_dssp TTBCEEEEEEEESSCCSCEEEEEEECCTT--CCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTT----TCEEEEECCTT
T ss_pred CCcEEEEEEEeCCCCCCCccEEEEEcCCC--CCcccccccccccccccccccchHHHHHHHHHHC----CCEEEEecCCC
Confidence 35555444332222 22257899999998 6655322 577888887 99999999999
Q ss_pred CcCCCCCC-----CCCC--------------H-HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCC
Q 017180 134 LGYSDRPK-----MDYN--------------A-DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVK 193 (376)
Q Consensus 134 ~G~S~~~~-----~~~~--------------~-~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~ 193 (376)
||.|.... ..+. . ...+.|+...++.+.....+...++.++||||||.+++.++... ++
T Consensus 175 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~-~~ 253 (398)
T 3nuz_A 175 AGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLD-TS 253 (398)
T ss_dssp SGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHC-TT
T ss_pred CCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcC-Cc
Confidence 99997332 0111 1 11224554555544322112246799999999999999888764 47
Q ss_pred cceEEEecc
Q 017180 194 PTAIAAVAP 202 (376)
Q Consensus 194 v~~lvl~~p 202 (376)
++++|.+++
T Consensus 254 i~a~v~~~~ 262 (398)
T 3nuz_A 254 IYAFVYNDF 262 (398)
T ss_dssp CCEEEEESC
T ss_pred EEEEEEecc
Confidence 888888754
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=3.4e-12 Score=116.62 Aligned_cols=58 Identities=17% Similarity=0.126 Sum_probs=44.6
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcc----cCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGA----KGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
++|++++||++|.++|.+..+++.+. ..++++++++++ |....+ .-...+.+||++.+
T Consensus 344 ~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~~~~~---~~~~d~l~WL~~r~ 406 (462)
T 3guu_A 344 KFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTAEI---FGLVPSLWFIKQAF 406 (462)
T ss_dssp CSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHHH---HTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCccCchh---hhHHHHHHHHHHHh
Confidence 78999999999999999887776533 357899999998 986432 12556778887754
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=4.8e-10 Score=97.85 Aligned_cols=108 Identities=6% Similarity=-0.042 Sum_probs=71.3
Q ss_pred CCcEEEecCCCCCccchHh-------HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCC
Q 017180 90 SKNILMIPTISDVSTVEEW-------RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDS 162 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~-------~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~ 162 (376)
-|+||++||.+ ++...| ..+++.|.+.....++.|+++|.+| .+... ..+ .+.+.+++..+++..-.
T Consensus 69 ~Pvlv~lHG~~--~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~--~~~~~-~~~-~~~~~~~l~~~i~~~~~ 142 (297)
T 1gkl_A 69 YNIFYLMHGGG--ENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNG--GNCTA-QNF-YQEFRQNVIPFVESKYS 142 (297)
T ss_dssp CEEEEEECCTT--CCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCS--TTCCT-TTH-HHHHHHTHHHHHHHHSC
T ss_pred CCEEEEECCCC--CCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcC--Cccch-HHH-HHHHHHHHHHHHHHhCC
Confidence 46788899988 544433 3556666654111149999999875 22211 112 23445667777665320
Q ss_pred CC---------CCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 163 PV---------SSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 163 ~~---------~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.. .....++.|+|+||||.+++.++.++|++++++++++|.
T Consensus 143 ~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~ 192 (297)
T 1gkl_A 143 TYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGD 192 (297)
T ss_dssp SSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCC
T ss_pred ccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEeccc
Confidence 00 001346899999999999999999999999999999984
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.3e-10 Score=98.84 Aligned_cols=36 Identities=14% Similarity=0.176 Sum_probs=33.2
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
..+++++||||||.+++.++.++|+.++++++++|.
T Consensus 151 ~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~ 186 (275)
T 2qm0_A 151 KGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPS 186 (275)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCC
T ss_pred CCCCEEEEecchhHHHHHHHHhCchhhceeEEeCce
Confidence 367999999999999999999999999999999883
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=2.7e-10 Score=103.75 Aligned_cols=111 Identities=8% Similarity=-0.016 Sum_probs=68.7
Q ss_pred CCcEEEecCCCCCccc-hHhHHHHHHHHhhhCCcceEEEEeCCCCCc-CCCCCCCCCCH-HHHHHHHHHHHhCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTV-EEWRLVAQDIVQRVGKVNWRATIVDWPGLG-YSDRPKMDYNA-DVMEKFVVDLINAPDSPVSS 166 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~-~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G-~S~~~~~~~~~-~~~~~~l~~~l~~l~~~~~~ 166 (376)
.|+|+++||.+ ... .....+++.|.+......+.|+++|++|++ ++......... +.+.+++..++++.- +...
T Consensus 197 ~PvlvllHG~~--~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~~~~~~~~~~~l~~el~~~i~~~~-~~~~ 273 (403)
T 3c8d_A 197 RPLAVLLDGEF--WAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVIA-PFSD 273 (403)
T ss_dssp CCEEEESSHHH--HHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSSCHHHHHHHHHTHHHHHHHHS-CCCC
T ss_pred CCEEEEeCCHH--HhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCccccccCCChHHHHHHHHHHHHHHHHHHC-CCCC
Confidence 57889999954 211 123346677776410012359999998742 33211111111 222345555555421 0001
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
..++++|+|+||||.+++.++.++|++++++++++|.
T Consensus 274 d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~ 310 (403)
T 3c8d_A 274 RADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGS 310 (403)
T ss_dssp CGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCC
T ss_pred CCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccc
Confidence 2468999999999999999999999999999999884
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=1.9e-07 Score=80.52 Aligned_cols=33 Identities=6% Similarity=0.021 Sum_probs=31.0
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
.++.|+||||||.+++.++.+ |+.++++++++|
T Consensus 141 ~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~ 173 (278)
T 2gzs_A 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASP 173 (278)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESG
T ss_pred CceEEEEECHHHHHHHHHHhC-ccccCeEEEeCc
Confidence 468999999999999999999 999999999988
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=2.3e-07 Score=81.04 Aligned_cols=35 Identities=6% Similarity=-0.022 Sum_probs=31.7
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcc-eEEEecc
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPT-AIAAVAP 202 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~-~lvl~~p 202 (376)
.++++|.|+|+||.+++.++..+|+.++ +++++++
T Consensus 10 ~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag 45 (318)
T 2d81_A 10 PNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAG 45 (318)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESC
T ss_pred cceEEEEEECHHHHHHHHHHHHCchhhhccceEEec
Confidence 4689999999999999999999999999 8887765
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.61 E-value=1.2e-07 Score=98.97 Aligned_cols=89 Identities=19% Similarity=0.203 Sum_probs=64.4
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
.++++|+|+.+ +....|..+...|. .+.|+++++++. +.+++...+.+..+. ...
T Consensus 1058 ~~~L~~l~~~~--g~~~~y~~la~~L~------~~~v~~l~~~~~------------~~~~~~~~~~i~~~~-----~~g 1112 (1304)
T 2vsq_A 1058 EQIIFAFPPVL--GYGLMYQNLSSRLP------SYKLCAFDFIEE------------EDRLDRYADLIQKLQ-----PEG 1112 (1304)
T ss_dssp CCEEECCCCTT--CBGGGGHHHHTTCC------SCEEEECBCCCS------------TTHHHHHHHHHHHHC-----CSS
T ss_pred CCcceeecccc--cchHHHHHHHhccc------ccceEeecccCH------------HHHHHHHHHHHHHhC-----CCC
Confidence 56799999999 77778866555443 489999887432 334455555555554 356
Q ss_pred cEEEEecchHHHHHHHHHHh---CCCCcceEEEeccC
Q 017180 170 DLVIFGGGHAATLTVRAAKK---NLVKPTAIAAVAPT 203 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~---~p~~v~~lvl~~p~ 203 (376)
++.++|||+||.+|..+|.+ ....+..+++++..
T Consensus 1113 p~~l~G~S~Gg~lA~e~A~~L~~~g~~v~~l~lld~~ 1149 (1304)
T 2vsq_A 1113 PLTLFGYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSY 1149 (1304)
T ss_dssp CEEEEEETTHHHHHHHHHHHHHHSSCCEEEEEEESCC
T ss_pred CeEEEEecCCchHHHHHHHHHHhCCCceeEEEEecCc
Confidence 89999999999999999874 34567888888753
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.58 E-value=4.6e-07 Score=79.85 Aligned_cols=34 Identities=15% Similarity=0.129 Sum_probs=31.2
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
...|+||||||..++.++.++|+.+.+++.++|.
T Consensus 138 ~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~ 171 (331)
T 3gff_A 138 INVLVGHSFGGLVAMEALRTDRPLFSAYLALDTS 171 (331)
T ss_dssp EEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCC
T ss_pred CeEEEEECHHHHHHHHHHHhCchhhheeeEeCch
Confidence 3478999999999999999999999999999984
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.49 E-value=1.8e-05 Score=73.07 Aligned_cols=107 Identities=11% Similarity=0.057 Sum_probs=69.1
Q ss_pred CCcEEEecCCCCCccchHhHHHH-----------------HHHHhhhCCcceEEEEeCC-CCCcCCCCCC----------
Q 017180 90 SKNILMIPTISDVSTVEEWRLVA-----------------QDIVQRVGKVNWRATIVDW-PGLGYSDRPK---------- 141 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~-----------------~~L~~~~~~~~~~Vi~~D~-~G~G~S~~~~---------- 141 (376)
.|.+|++||.+ +++..|..+. ..+.+ ..+|+-+|. .|.|.|-...
T Consensus 67 ~Pl~lwlnGGP--G~SS~~g~~~e~GP~~~~~~~~l~~n~~sw~~-----~~n~lfiDqPvGtGfSy~~~~~~~~~~~~~ 139 (483)
T 1ac5_A 67 RPLIIWLNGGP--GCSSMDGALVESGPFRVNSDGKLYLNEGSWIS-----KGDLLFIDQPTGTGFSVEQNKDEGKIDKNK 139 (483)
T ss_dssp CCEEEEECCTT--TBCTHHHHHHSSSSEEECTTSCEEECTTCGGG-----TSEEEEECCSTTSTTCSSCCSSGGGSCTTS
T ss_pred CCEEEEECCCC--chHhhhhhHhhcCCeEecCCCceeecccchhh-----cCCeEEEecCCCccccCCcCcccccccccc
Confidence 78899999999 7666652211 01112 478999997 6999985221
Q ss_pred CCCCHHHHHHHHHHHHhCCCCCC-CCCCCcEEEEecchHHHHHHHHHHh-------C-----CCCcceEEEeccC
Q 017180 142 MDYNADVMEKFVVDLINAPDSPV-SSSESDLVIFGGGHAATLTVRAAKK-------N-----LVKPTAIAAVAPT 203 (376)
Q Consensus 142 ~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~lvG~S~Gg~ia~~~a~~-------~-----p~~v~~lvl~~p~ 203 (376)
...+.+..++++..+++..-... .....+++|.|+|+||..+-.+|.. . +-.++++++-+|.
T Consensus 140 ~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLkGi~IGNg~ 214 (483)
T 1ac5_A 140 FDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGW 214 (483)
T ss_dssp SCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEEC
T ss_pred cCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccceeeeEecCCc
Confidence 12356677777776665421000 0126789999999999999888761 1 2457788877763
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.40 E-value=4.7e-07 Score=84.49 Aligned_cols=111 Identities=5% Similarity=-0.113 Sum_probs=70.4
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCC----CCcCCCCCC-------CCCCHHHHHHHHHHHH
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWP----GLGYSDRPK-------MDYNADVMEKFVVDLI 157 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~----G~G~S~~~~-------~~~~~~~~~~~l~~~l 157 (376)
.|+||+|||.+.. ++...+......|+++. ++.|+.+|+| ||+.+.... ..+.+.+....+..+.
T Consensus 99 ~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~---~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv~ 175 (498)
T 2ogt_A 99 RPVLFWIHGGAFLFGSGSSPWYDGTAFAKHG---DVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLGILDQVAALRWVK 175 (498)
T ss_dssp EEEEEEECCSTTTSCCTTCGGGCCHHHHHHH---TCEEEEECCCCHHHHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCccCCCCCCCCcCCHHHHHhCC---CEEEEeCCCcCchhhccCchhhccccccCCCCcccHHHHHHHHHHH
Confidence 5789999997622 12222222345666651 3999999999 888776311 1223445555444443
Q ss_pred hCCCCCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccCC
Q 017180 158 NAPDSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPTW 204 (376)
Q Consensus 158 ~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~~ 204 (376)
+... ......++|+|+|+|.||.+++.++.. ....++++|+.++..
T Consensus 176 ~~i~-~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 223 (498)
T 2ogt_A 176 ENIA-AFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSG 223 (498)
T ss_dssp HHGG-GGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred HHHH-HhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCc
Confidence 3321 000124679999999999999888774 245799999999853
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=98.34 E-value=7.7e-07 Score=82.87 Aligned_cols=107 Identities=6% Similarity=-0.113 Sum_probs=67.7
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCC----CCcCCCCC----CCCCCHHHHHHHHHHHHh--
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWP----GLGYSDRP----KMDYNADVMEKFVVDLIN-- 158 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~----G~G~S~~~----~~~~~~~~~~~~l~~~l~-- 158 (376)
.|.||++||.+.. ++...+......|+++. ++.|+.+|+| |++.+... .......+..+.+..+.+
T Consensus 97 ~PviV~iHGGg~~~g~~~~~~~~~~~la~~g---~~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~~i 173 (489)
T 1qe3_A 97 LPVMVWIHGGAFYLGAGSEPLYDGSKLAAQG---EVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENI 173 (489)
T ss_dssp EEEEEEECCSTTTSCCTTSGGGCCHHHHHHH---TCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHG
T ss_pred CCEEEEECCCccccCCCCCcccCHHHHHhcC---CEEEEecCccCcccccCccccccccCCCCcchHHHHHHHHHHHHHH
Confidence 5789999995521 22222223355666541 4999999999 67665421 122334444444443333
Q ss_pred -CCCCCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccC
Q 017180 159 -APDSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPT 203 (376)
Q Consensus 159 -~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~ 203 (376)
..+ ...+++.|+|+|.||.+++.++.. .+..++++|+.++.
T Consensus 174 ~~fg----gDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 217 (489)
T 1qe3_A 174 SAFG----GDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGA 217 (489)
T ss_dssp GGGT----EEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCC
T ss_pred HHhC----CCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCC
Confidence 222 124579999999999999887764 25689999999884
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=0.00045 Score=62.45 Aligned_cols=121 Identities=15% Similarity=0.053 Sum_probs=74.3
Q ss_pred ceeEEEEecccC-CCCCCCcEEEecCCCCCccchHhHHHH---H--------------HHHhhhCCcceEEEEeC-CCCC
Q 017180 74 SINIYYEKHERE-SPDPSKNILMIPTISDVSTVEEWRLVA---Q--------------DIVQRVGKVNWRATIVD-WPGL 134 (376)
Q Consensus 74 g~~l~y~~~g~~-~~~~~~~vvllHG~~~~~~~~~~~~~~---~--------------~L~~~~~~~~~~Vi~~D-~~G~ 134 (376)
+.+++|.-.... ++..+|.+|+++|.+ +++..+..+. + .+.+ ..+|+-+| ..|.
T Consensus 27 ~~~lfy~f~~s~~~~~~~Pl~lwlnGGP--G~SS~~g~~~e~GP~~~~~~~~l~~n~~sW~~-----~an~lfiDqPvGt 99 (421)
T 1cpy_A 27 DKHFFFWTFESRNDPAKDPVILWLNGGP--GCSSLTGLFFALGPSSIGPDLKPIGNPYSWNS-----NATVIFLDQPVNV 99 (421)
T ss_dssp TEEEEEEEECCSSCTTTSCEEEEECCTT--TBCTHHHHTTTTSSEEEETTTEEEECTTCGGG-----GSEEECCCCSTTS
T ss_pred CcEEEEEEEEeCCCCCCCCEEEEECCCC--chHhHHHHHHccCCcEECCCCceeECCccccc-----ccCEEEecCCCcc
Confidence 456666443322 223378899999999 6655552211 0 0112 47899999 5699
Q ss_pred cCCC-CCCCCCCHHHHHHHHHHHHhCCC---CCCCCCC--CcEEEEecchHHHHHHHHHHh---C---CCCcceEEEecc
Q 017180 135 GYSD-RPKMDYNADVMEKFVVDLINAPD---SPVSSSE--SDLVIFGGGHAATLTVRAAKK---N---LVKPTAIAAVAP 202 (376)
Q Consensus 135 G~S~-~~~~~~~~~~~~~~l~~~l~~l~---~~~~~~~--~~~~lvG~S~Gg~ia~~~a~~---~---p~~v~~lvl~~p 202 (376)
|.|- ......+.+..++|+.++++..- .+. .. .+++|.|.|.||..+-.+|.. + .-.++++++-+|
T Consensus 100 GfSy~~~~~~~~~~~~a~~~~~fl~~~~~~~p~~--~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~IGNg 177 (421)
T 1cpy_A 100 GFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEY--VNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGNG 177 (421)
T ss_dssp TTCEESSCCCCSSHHHHHHHHHHHHHHHHHCTTS--TTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEEESC
T ss_pred cccCCCCCCCCChHHHHHHHHHHHHHHHHhCHHh--cccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEecCc
Confidence 9885 22223445566677666554321 011 13 689999999999999888872 1 245788877765
Q ss_pred C
Q 017180 203 T 203 (376)
Q Consensus 203 ~ 203 (376)
.
T Consensus 178 ~ 178 (421)
T 1cpy_A 178 L 178 (421)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=0.00013 Score=63.04 Aligned_cols=106 Identities=10% Similarity=0.026 Sum_probs=62.7
Q ss_pred CcEEEecCCCCCccchHhHHH--H-HHHHhhhCCcceEEEEeCCCCCc----------------CCCCCC-------CCC
Q 017180 91 KNILMIPTISDVSTVEEWRLV--A-QDIVQRVGKVNWRATIVDWPGLG----------------YSDRPK-------MDY 144 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~--~-~~L~~~~~~~~~~Vi~~D~~G~G----------------~S~~~~-------~~~ 144 (376)
|+|.++||++ ++...|... + ..+.+. +..++++|..--+ .+-..+ ..+
T Consensus 50 PVLYlLhG~~--~~~~~w~~~~~~~~~~~~~----~~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~ 123 (299)
T 4fol_A 50 PTVFYLSGLT--CTPDNASEKAFWQFQADKY----GFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHY 123 (299)
T ss_dssp CEEEEECCTT--CCHHHHHHHSCHHHHHHHH----TCEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTC
T ss_pred CEEEEECCCC--CChHHHHHhchHhHHHHHc----CchhhccCCCcceeecCCCcccccccccCCccccccccCccccCc
Confidence 6777889999 887777542 2 333443 6888888742111 110000 112
Q ss_pred CHH-HHHHHHHHHHhCC-C---CCCCCCCCcEEEEecchHHHHHHHHHHhC--CCCcceEEEecc
Q 017180 145 NAD-VMEKFVVDLINAP-D---SPVSSSESDLVIFGGGHAATLTVRAAKKN--LVKPTAIAAVAP 202 (376)
Q Consensus 145 ~~~-~~~~~l~~~l~~l-~---~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~--p~~v~~lvl~~p 202 (376)
..+ .+.++|..++++. . .+.....++..|.||||||.-|+.+|.++ |++..++...+|
T Consensus 124 ~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~ 188 (299)
T 4fol_A 124 QMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAP 188 (299)
T ss_dssp BHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESC
T ss_pred cHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEeccc
Confidence 222 2455666666431 1 00000134689999999999999999985 677777777776
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=7.8e-06 Score=68.24 Aligned_cols=123 Identities=10% Similarity=0.043 Sum_probs=78.7
Q ss_pred ceeEEEEecccC-CCCCCCcEEEecCCCCCccchHh-HHHH------------------HHHHhhhCCcceEEEEeCC-C
Q 017180 74 SINIYYEKHERE-SPDPSKNILMIPTISDVSTVEEW-RLVA------------------QDIVQRVGKVNWRATIVDW-P 132 (376)
Q Consensus 74 g~~l~y~~~g~~-~~~~~~~vvllHG~~~~~~~~~~-~~~~------------------~~L~~~~~~~~~~Vi~~D~-~ 132 (376)
|.+++|.-.... ++..+|.+|+++|.+ +++..+ ..+. ..+.+ ..+|+-+|. .
T Consensus 31 ~~~lFywf~es~~~~~~~Pl~lwlnGGP--GcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~-----~anvlfiDqPv 103 (255)
T 1whs_A 31 GRSLFYLLQEAPEDAQPAPLVLWLNGGP--GCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNK-----VANVLFLDSPA 103 (255)
T ss_dssp TEEEEEEEECCCGGGCSCCEEEEECCTT--TBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGG-----TSEEEEECCST
T ss_pred CcEEEEEEEEecCCCCCCCEEEEECCCC--chHHHHHHHHhccCCeEecCCCCeeeeCcccccc-----cCCEEEEecCC
Confidence 456666543322 122378899999999 666554 2211 01122 488999996 5
Q ss_pred CCcCCCCC-CC---CCCHHHHHHHHHHHHhCCCCCC-CCCCCcEEEEecchHHHHHHHHHHh----C--CCCcceEEEec
Q 017180 133 GLGYSDRP-KM---DYNADVMEKFVVDLINAPDSPV-SSSESDLVIFGGGHAATLTVRAAKK----N--LVKPTAIAAVA 201 (376)
Q Consensus 133 G~G~S~~~-~~---~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~lvG~S~Gg~ia~~~a~~----~--p~~v~~lvl~~ 201 (376)
|.|.|-.. .. ..+.++.++++.++++..-.+. .....+++|.|.|.||..+-.+|.. . .-.++++++.+
T Consensus 104 GtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign 183 (255)
T 1whs_A 104 GVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGN 183 (255)
T ss_dssp TSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEE
T ss_pred CCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecC
Confidence 99998522 11 3577788888877775321000 0125789999999999999888872 1 25678999998
Q ss_pred cC
Q 017180 202 PT 203 (376)
Q Consensus 202 p~ 203 (376)
|.
T Consensus 184 ~~ 185 (255)
T 1whs_A 184 GL 185 (255)
T ss_dssp EC
T ss_pred Cc
Confidence 73
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.16 E-value=3.1e-06 Score=79.86 Aligned_cols=107 Identities=7% Similarity=-0.152 Sum_probs=67.5
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHh-hhCCcceEEEEeCCC----CCcCCC-CCC--CCCCHHHHHHHHHHHHhC-
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQ-RVGKVNWRATIVDWP----GLGYSD-RPK--MDYNADVMEKFVVDLINA- 159 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~-~~~~~~~~Vi~~D~~----G~G~S~-~~~--~~~~~~~~~~~l~~~l~~- 159 (376)
.|+||+|||.+.. ++..........|++ . |+-|+.+++| ||+.+. .+. ....+.+....+..+.+.
T Consensus 112 ~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~----g~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i 187 (543)
T 2ha2_A 112 TPVLIWIYGGGFYSGAASLDVYDGRFLAQVE----GAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENI 187 (543)
T ss_dssp EEEEEEECCSTTTCCCTTSGGGCTHHHHHHH----CCEEEEECCCCHHHHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHG
T ss_pred CeEEEEECCCccccCCCCCCcCChHHHHhcC----CEEEEEecccccccccccCCCCCCCCCcccHHHHHHHHHHHHHHH
Confidence 4789999996622 222211122345554 4 8999999999 555442 121 233455555555444333
Q ss_pred --CCCCCCCCCCcEEEEecchHHHHHHHHHHhC--CCCcceEEEeccCC
Q 017180 160 --PDSPVSSSESDLVIFGGGHAATLTVRAAKKN--LVKPTAIAAVAPTW 204 (376)
Q Consensus 160 --l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~--p~~v~~lvl~~p~~ 204 (376)
.+ ...++|+|+|+|.||..+..++... +..++++|+.++..
T Consensus 188 ~~fg----gDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 188 AAFG----GDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp GGGT----EEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred HHhC----CChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 33 2356899999999999998876632 45799999998853
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=7.7e-05 Score=66.23 Aligned_cols=36 Identities=6% Similarity=-0.088 Sum_probs=31.3
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
..+++.++|||+||..++.+++..+ +|+.+|..++.
T Consensus 217 D~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg 252 (433)
T 4g4g_A 217 DTKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESG 252 (433)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCC
T ss_pred ChhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCC
Confidence 3578999999999999999999765 89999988763
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=98.14 E-value=5.7e-05 Score=66.21 Aligned_cols=54 Identities=9% Similarity=-0.039 Sum_probs=37.8
Q ss_pred HHHHHHHHHhCCCCCC--CCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 149 MEKFVVDLINAPDSPV--SSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~--~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
++=++...++.+..+. .+..+++.++|||+||..++.+|+..+ +|+.+|..++.
T Consensus 163 waWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g 218 (375)
T 3pic_A 163 WAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESG 218 (375)
T ss_dssp HHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCC
T ss_pred HHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCC
Confidence 3334444444443211 234578999999999999999999765 89988888763
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.10 E-value=2e-05 Score=72.05 Aligned_cols=119 Identities=15% Similarity=0.097 Sum_probs=75.6
Q ss_pred ceeEEEEecccCC-CCCCCcEEEecCCCCCccchHhHHHHHHH-------------------HhhhCCcceEEEEeCC-C
Q 017180 74 SINIYYEKHERES-PDPSKNILMIPTISDVSTVEEWRLVAQDI-------------------VQRVGKVNWRATIVDW-P 132 (376)
Q Consensus 74 g~~l~y~~~g~~~-~~~~~~vvllHG~~~~~~~~~~~~~~~~L-------------------~~~~~~~~~~Vi~~D~-~ 132 (376)
+.+++|.-..... +..+|.||++||.+ +++..+..+ ..+ .+ ..+|+-+|. +
T Consensus 31 ~~~lfy~f~~s~~~~~~~Pl~lwlnGGP--G~Ss~~g~~-~e~GP~~~~~~~~~l~~n~~sw~~-----~~~~lfiDqP~ 102 (452)
T 1ivy_A 31 SKHLHYWFVESQKDPENSPVVLWLNGGP--GCSSLDGLL-TEHGPFLVQPDGVTLEYNPYSWNL-----IANVLYLESPA 102 (452)
T ss_dssp TEEEEEEEECCSSCGGGSCEEEEECCTT--TBCTHHHHH-TTTSSEEECTTSSCEEECTTCGGG-----SSEEEEECCST
T ss_pred CCeEEEEEEEcCCCCCCCCEEEEECCCC--cHHHHHHHH-HhcCCcEEeCCCceeeeCCCcccc-----cccEEEEecCC
Confidence 4567765544321 22378899999999 666655222 111 12 589999996 7
Q ss_pred CCcCCCCCCCCC--CHHHHHHH----HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH----hCCCCcceEEEecc
Q 017180 133 GLGYSDRPKMDY--NADVMEKF----VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK----KNLVKPTAIAAVAP 202 (376)
Q Consensus 133 G~G~S~~~~~~~--~~~~~~~~----l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~----~~p~~v~~lvl~~p 202 (376)
|.|.|-.....+ +.+..++| |..+++..-. ....+++|+|+|+||..+-.+|. ..+..++++++.+|
T Consensus 103 GtGfS~~~~~~~~~~~~~~a~~~~~~l~~f~~~~p~---~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~ 179 (452)
T 1ivy_A 103 GVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPE---YKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNG 179 (452)
T ss_dssp TSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGG---GTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESC
T ss_pred CCCcCCcCCCCCcCCcHHHHHHHHHHHHHHHHhcHH---hcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCC
Confidence 999996222222 33344444 4444444210 12578999999999997776666 34677899999988
Q ss_pred C
Q 017180 203 T 203 (376)
Q Consensus 203 ~ 203 (376)
.
T Consensus 180 ~ 180 (452)
T 1ivy_A 180 L 180 (452)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=6.1e-06 Score=77.83 Aligned_cols=105 Identities=6% Similarity=-0.042 Sum_probs=67.8
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHh-hhCCcceEEEEeCCC----CCcCCCCC--CCCCCHHHHHHHHHHHH---h
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQ-RVGKVNWRATIVDWP----GLGYSDRP--KMDYNADVMEKFVVDLI---N 158 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~-~~~~~~~~Vi~~D~~----G~G~S~~~--~~~~~~~~~~~~l~~~l---~ 158 (376)
.|+||+|||.+.. ++...|... .|+. . |+-|+.+|+| |++.+... ...+.+.+....+..+. .
T Consensus 115 ~Pv~v~iHGG~~~~g~~~~~~~~--~la~~~----g~vvv~~nYRlg~~gf~~~~~~~~~~n~gl~D~~~al~wv~~ni~ 188 (542)
T 2h7c_A 115 LPVMVWIHGGGLMVGAASTYDGL--ALAAHE----NVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIA 188 (542)
T ss_dssp EEEEEEECCSTTTSCCSTTSCCH--HHHHHH----TCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGG
T ss_pred CCEEEEECCCcccCCCccccCHH--HHHhcC----CEEEEecCCCCccccCCCCCcccCccchhHHHHHHHHHHHHHHHH
Confidence 5789999996522 222223322 2433 3 8999999999 66554322 12334455554444443 3
Q ss_pred CCCCCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccCC
Q 017180 159 APDSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPTW 204 (376)
Q Consensus 159 ~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~~ 204 (376)
..+ ....+|.|+|+|.||.++..++.. .+..++++|+.++..
T Consensus 189 ~fg----gDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 232 (542)
T 2h7c_A 189 SFG----GNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 232 (542)
T ss_dssp GGT----EEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred HcC----CCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCc
Confidence 333 234689999999999999988875 367899999998753
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.01 E-value=1.2e-05 Score=75.64 Aligned_cols=107 Identities=8% Similarity=-0.044 Sum_probs=68.4
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHh-hhCCcceEEEEeCCC----CCcCC-CCCC--CCCCHHHHHHHHHHHHh--
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQ-RVGKVNWRATIVDWP----GLGYS-DRPK--MDYNADVMEKFVVDLIN-- 158 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~-~~~~~~~~Vi~~D~~----G~G~S-~~~~--~~~~~~~~~~~l~~~l~-- 158 (376)
.|+||+|||.+.. ++..........|++ . |+-|+.+++| ||+.+ ..+. ....+.+....+..+.+
T Consensus 107 ~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~----~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i 182 (529)
T 1p0i_A 107 ATVLIWIYGGGFQTGTSSLHVYDGKFLARVE----RVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNI 182 (529)
T ss_dssp EEEEEEECCSTTTSCCTTCGGGCTHHHHHHH----CCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHG
T ss_pred CeEEEEECCCccccCCCCccccChHHHhccC----CeEEEEecccccccccccCCCCCCCcCcccHHHHHHHHHHHHHHH
Confidence 5789999996522 222221122345554 4 8999999999 55555 2222 23345555555554433
Q ss_pred -CCCCCCCCCCCcEEEEecchHHHHHHHHHHhC--CCCcceEEEeccCC
Q 017180 159 -APDSPVSSSESDLVIFGGGHAATLTVRAAKKN--LVKPTAIAAVAPTW 204 (376)
Q Consensus 159 -~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~--p~~v~~lvl~~p~~ 204 (376)
..+ ....+|.|+|+|.||..+..++... ...++++|+.++..
T Consensus 183 ~~fg----gdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 183 AAFG----GNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp GGGT----EEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred HHhC----CChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 333 1346799999999999999887743 45789999999854
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=97.99 E-value=3.9e-06 Score=79.25 Aligned_cols=110 Identities=7% Similarity=-0.085 Sum_probs=67.8
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCC----CcCCCCC--CCCCCHHHHHHHHHHHHhCCCC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPG----LGYSDRP--KMDYNADVMEKFVVDLINAPDS 162 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G----~G~S~~~--~~~~~~~~~~~~l~~~l~~l~~ 162 (376)
.|+||+|||.+.. ++..........|++. |+-|+.+|+|. +..+... .....+.+....+..+.+...
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~----g~vvv~~nYRl~~~Gf~~~~~~~~~~n~gl~D~~~al~wv~~~i~- 189 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVSK----DVIVITFNYRLNVYGFLSLNSTSVPGNAGLRDMVTLLKWVQRNAH- 189 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGGGG----SCEEEEECCCCHHHHHCCCSSSSCCSCHHHHHHHHHHHHHHHHTG-
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHHhC----CeEEEEeCCcCCccccccCcccCCCCchhHHHHHHHHHHHHHHHH-
Confidence 4789999995421 2222111233455555 99999999994 3333211 123445555555544433321
Q ss_pred CCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccCC
Q 017180 163 PVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPTW 204 (376)
Q Consensus 163 ~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~~ 204 (376)
.......+|+|+|+|.||.+++.++.. .+..++++|+.++..
T Consensus 190 ~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 190 FFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred HhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 000134679999999999999988774 456799999999853
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=7.7e-05 Score=68.92 Aligned_cols=89 Identities=11% Similarity=0.048 Sum_probs=69.8
Q ss_pred HHHHHHhhhCCcceEEEEeCCCCCcCCCCCC---------CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHH
Q 017180 111 VAQDIVQRVGKVNWRATIVDWPGLGYSDRPK---------MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAAT 181 (376)
Q Consensus 111 ~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~---------~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ 181 (376)
++..++++. |--+|.+.+|-||+|.+-. .-.|.++..+|+..|++.+.........|++++|.|.||+
T Consensus 64 ~~~~lA~~~---~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~ 140 (472)
T 4ebb_A 64 FVAELAAER---GALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGM 140 (472)
T ss_dssp HHHHHHHHH---TCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHH
T ss_pred HHHHHHHHh---CCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEccCccch
Confidence 344556542 6789999999999997421 2378899999999998776533223457899999999999
Q ss_pred HHHHHHHhCCCCcceEEEecc
Q 017180 182 LTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 182 ia~~~a~~~p~~v~~lvl~~p 202 (376)
+|.-+-.++|+.|.+.+.-+.
T Consensus 141 LaAW~R~kYP~lv~ga~ASSA 161 (472)
T 4ebb_A 141 LSAYLRMKYPHLVAGALAASA 161 (472)
T ss_dssp HHHHHHHHCTTTCSEEEEETC
T ss_pred hhHHHHhhCCCeEEEEEeccc
Confidence 999999999999999887764
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=97.95 E-value=1.3e-05 Score=75.50 Aligned_cols=107 Identities=5% Similarity=-0.151 Sum_probs=68.4
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHH-hhhCCcceEEEEeCCC----CCcCC-CCC--CCCCCHHHHHHHHHHHHhC-
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIV-QRVGKVNWRATIVDWP----GLGYS-DRP--KMDYNADVMEKFVVDLINA- 159 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~-~~~~~~~~~Vi~~D~~----G~G~S-~~~--~~~~~~~~~~~~l~~~l~~- 159 (376)
.|+||+|||.+.. ++..........|+ +. |+-|+.+++| ||+.+ ..+ .....+.+....+..+.+.
T Consensus 109 ~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~----~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~ni 184 (537)
T 1ea5_A 109 TTVMVWIYGGGFYSGSSTLDVYNGKYLAYTE----EVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDNI 184 (537)
T ss_dssp EEEEEEECCSTTTCCCTTCGGGCTHHHHHHH----TCEEEECCCCCHHHHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHG
T ss_pred CeEEEEECCCcccCCCCCCCccChHHHHhcC----CEEEEEeccCccccccccCCCCCCCcCccccHHHHHHHHHHHHHH
Confidence 5789999995522 22222112234555 44 8999999999 55544 222 1233455555555544333
Q ss_pred --CCCCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccCC
Q 017180 160 --PDSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPTW 204 (376)
Q Consensus 160 --l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~~ 204 (376)
.+ ....+|.|+|+|.||..+..++.. ....++++|+.++..
T Consensus 185 ~~fg----gdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 185 QFFG----GDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp GGGT----EEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred HHhC----CCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 33 235689999999999999887763 345799999999853
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.79 E-value=1.5e-05 Score=74.71 Aligned_cols=107 Identities=9% Similarity=-0.041 Sum_probs=65.4
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHH-HhhhCCcceEEEEeCCC----CCcCCCCC----CCCCCHHHHHHHHHHHHh-
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDI-VQRVGKVNWRATIVDWP----GLGYSDRP----KMDYNADVMEKFVVDLIN- 158 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L-~~~~~~~~~~Vi~~D~~----G~G~S~~~----~~~~~~~~~~~~l~~~l~- 158 (376)
.|+||+|||.+.. ++...|....-.. .+. |+-|+.+|+| ||+.++.. .....+.+....+..+.+
T Consensus 102 ~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~----g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~n 177 (522)
T 1ukc_A 102 LPVWLFIQGGGYAENSNANYNGTQVIQASDD----VIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQY 177 (522)
T ss_dssp EEEEEEECCSTTTSCCSCSCCCHHHHHHTTS----CCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCccccCCccccCcHHHHHhcCC----cEEEEEecccccccccccchhccccCCCChhHHHHHHHHHHHHHH
Confidence 5789999997632 2222232211111 122 8999999999 56554321 123445555555554433
Q ss_pred --CCCCCCCCCCCcEEEEecchHHHHHHHHHHhC----CCCcceEEEeccCC
Q 017180 159 --APDSPVSSSESDLVIFGGGHAATLTVRAAKKN----LVKPTAIAAVAPTW 204 (376)
Q Consensus 159 --~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~----p~~v~~lvl~~p~~ 204 (376)
+.+ ....+|.|+|+|.||..+..++... ...++++|+.++..
T Consensus 178 i~~fg----gDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 178 IEQFG----GDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 225 (522)
T ss_dssp GGGGT----EEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred HHHcC----CCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCc
Confidence 333 1346799999999998776655532 56789999998854
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=5.5e-06 Score=90.77 Aligned_cols=93 Identities=9% Similarity=0.120 Sum_probs=0.0
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+++++++|+.+ +....|..+...|. ..|+.+.+|| .. ...+++++++++.+.+..+. ..+
T Consensus 2242 ~~~Lfc~~~ag--G~~~~y~~l~~~l~-------~~v~~lq~pg----~~--~~~~i~~la~~~~~~i~~~~-----p~g 2301 (2512)
T 2vz8_A 2242 ERPLFLVHPIE--GSITVFHGLAAKLS-------IPTYGLQCTG----AA--PLDSIQSLASYYIECIRQVQ-----PEG 2301 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCeEEeCCcc--ccHHHHHHHHHhhC-------CcEEEEecCC----CC--CCCCHHHHHHHHHHHHHHhC-----CCC
Confidence 46899999998 88777877665553 5788888887 11 22456677777766666654 346
Q ss_pred cEEEEecchHHHHHHHHHHhC---CCCcc---eEEEecc
Q 017180 170 DLVIFGGGHAATLTVRAAKKN---LVKPT---AIAAVAP 202 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~---p~~v~---~lvl~~p 202 (376)
++.++||||||.+|..+|.+- ...+. .++++++
T Consensus 2302 py~L~G~S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg 2340 (2512)
T 2vz8_A 2302 PYRIAGYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDG 2340 (2512)
T ss_dssp ---------------------------------------
T ss_pred CEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEeC
Confidence 899999999999999998742 12333 5666664
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=9.9e-05 Score=70.21 Aligned_cols=110 Identities=7% Similarity=-0.113 Sum_probs=67.3
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHh-hhCCcceEEEEeCCC----CCcCCC---------CCCCCCCHHHHHHHHH
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQ-RVGKVNWRATIVDWP----GLGYSD---------RPKMDYNADVMEKFVV 154 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~-~~~~~~~~Vi~~D~~----G~G~S~---------~~~~~~~~~~~~~~l~ 154 (376)
.|+||+|||.+.. ++...+......|+. . ++-|+.+++| ||+... .....+.+.+....+.
T Consensus 141 ~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~----~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~ 216 (585)
T 1dx4_A 141 LPILIWIYGGGFMTGSATLDIYNADIMAAVG----NVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIR 216 (585)
T ss_dssp EEEEEEECCSTTTCCCTTCGGGCCHHHHHHH----TCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHH
T ss_pred CCEEEEECCCcccCCCCCCCCCCchhhhccC----CEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHH
Confidence 5789999996522 222222122345554 3 7999999999 554321 1112344556555555
Q ss_pred HHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccCC
Q 017180 155 DLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPTW 204 (376)
Q Consensus 155 ~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~~ 204 (376)
.+.+... .......+|.|+|+|.||..+..++.. ....+++.|+.++..
T Consensus 217 wv~~ni~-~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 217 WLKDNAH-AFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHSTG-GGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHH-HhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 5544431 111134679999999999988877764 245789999998753
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=2.1e-05 Score=67.08 Aligned_cols=97 Identities=11% Similarity=-0.016 Sum_probs=55.1
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEE-eCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATI-VDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~-~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
+..||.+||.. . +.+.+.+. ++.+.. .|++|.+.- ........+.+.+++.++++.+..+. ..
T Consensus 74 ~~iVva~RGT~--~-------~~d~l~d~----~~~~~~~~~~~~~~~v-h~Gf~~~~~~~~~~~~~~~~~~~~~~--~~ 137 (269)
T 1tib_A 74 KLIVLSFRGSR--S-------IENWIGNL----NFDLKEINDICSGCRG-HDGFTSSWRSVADTLRQKVEDAVREH--PD 137 (269)
T ss_dssp TEEEEEECCCS--C-------THHHHTCC----CCCEEECTTTSTTCEE-EHHHHHHHHHHHHHHHHHHHHHHHHC--TT
T ss_pred CEEEEEEeCCC--C-------HHHHHHhc----CeeeeecCCCCCCCEe-cHHHHHHHHHHHHHHHHHHHHHHHHC--CC
Confidence 45677789976 3 23445554 677776 576652111 00011122344555555554432111 25
Q ss_pred CcEEEEecchHHHHHHHHHHhCCC---CcceEEEecc
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLV---KPTAIAAVAP 202 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~p 202 (376)
.+++++||||||.+|..++..... .+..+++-+|
T Consensus 138 ~~i~l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P 174 (269)
T 1tib_A 138 YRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAP 174 (269)
T ss_dssp SEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCC
T ss_pred ceEEEecCChHHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 689999999999999999986432 2444444444
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.59 E-value=6.1e-05 Score=70.98 Aligned_cols=108 Identities=8% Similarity=-0.076 Sum_probs=65.5
Q ss_pred CCcEEEecCCCCC-ccchHhH--HHHH-HHHhhhCCcceEEEEeCCCC----CcCCC----CCCCCCCHHHHHHHHHHHH
Q 017180 90 SKNILMIPTISDV-STVEEWR--LVAQ-DIVQRVGKVNWRATIVDWPG----LGYSD----RPKMDYNADVMEKFVVDLI 157 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~--~~~~-~L~~~~~~~~~~Vi~~D~~G----~G~S~----~~~~~~~~~~~~~~l~~~l 157 (376)
.|+||+|||.+.. ++...+. .++. .++.. .++-|+.+|+|. +..+. .......+.+....+..+.
T Consensus 122 ~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~---~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~ 198 (544)
T 1thg_A 122 LPVMVWIYGGAFVYGSSAAYPGNSYVKESINMG---QPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVS 198 (544)
T ss_dssp EEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTT---CCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCccccCCccccCchHHHHHHhhcC---CCEEEEeCCCCCCcccCCCcccccccCCCchhHHHHHHHHHHHH
Confidence 5789999996633 2222231 2222 23321 269999999994 22211 0112344555555555444
Q ss_pred hC---CCCCCCCCCCcEEEEecchHHHHHHHHHHhC--------CCCcceEEEeccCC
Q 017180 158 NA---PDSPVSSSESDLVIFGGGHAATLTVRAAKKN--------LVKPTAIAAVAPTW 204 (376)
Q Consensus 158 ~~---l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~--------p~~v~~lvl~~p~~ 204 (376)
+. .+ ...++|.|+|+|.||..++.++... ...++++|+.+|..
T Consensus 199 ~ni~~fg----gDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 199 DNIANFG----GDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HHGGGGT----EEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred HHHHHhC----CChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 33 33 1356899999999999988777642 45789999999853
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00016 Score=68.54 Aligned_cols=107 Identities=9% Similarity=0.019 Sum_probs=65.6
Q ss_pred CCcEEEecCCCCCc-cchH------hHHHHHHHHhhhCCcceEEEEeCCC----CCcCCCCCC--CCCCHHHHHHHHHHH
Q 017180 90 SKNILMIPTISDVS-TVEE------WRLVAQDIVQRVGKVNWRATIVDWP----GLGYSDRPK--MDYNADVMEKFVVDL 156 (376)
Q Consensus 90 ~~~vvllHG~~~~~-~~~~------~~~~~~~L~~~~~~~~~~Vi~~D~~----G~G~S~~~~--~~~~~~~~~~~l~~~ 156 (376)
.|+||+|||.+... +... +......|+.. .++-|+.+++| |++.+.... ..+.+.+....+..+
T Consensus 98 ~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~---~~vvvV~~nYRLg~~Gfl~~~~~~~pgn~gl~D~~~Al~wv 174 (579)
T 2bce_A 98 LPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATR---GNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWV 174 (579)
T ss_dssp EEEEEECCCCSEEEC-------CTTGGGCCHHHHHH---HTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHH
T ss_pred CeEEEEECCCcccCCCCCccccccccccChHHHhcC---CCEEEEEeCCccccccCCcCCCCCCCCccchHHHHHHHHHH
Confidence 57899999976221 1110 00112344432 16999999999 555443211 223456665555544
Q ss_pred Hh---CCCCCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccC
Q 017180 157 IN---APDSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPT 203 (376)
Q Consensus 157 l~---~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~ 203 (376)
.+ ..+ +...+|.|+|+|.||..+..++.. ....+++.|+.++.
T Consensus 175 ~~ni~~fG----gDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 175 KRNIEAFG----GDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp HHHGGGGT----EEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred HHHHHHhC----CCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 33 333 234679999999999999888763 35678999998864
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=7.1e-05 Score=70.37 Aligned_cols=107 Identities=9% Similarity=-0.088 Sum_probs=64.6
Q ss_pred CCcEEEecCCCCC-ccchHh--HHHHH-HHHhhhCCcceEEEEeCCCC----CcCCC----CCCCCCCHHHHHHHHHHHH
Q 017180 90 SKNILMIPTISDV-STVEEW--RLVAQ-DIVQRVGKVNWRATIVDWPG----LGYSD----RPKMDYNADVMEKFVVDLI 157 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~--~~~~~-~L~~~~~~~~~~Vi~~D~~G----~G~S~----~~~~~~~~~~~~~~l~~~l 157 (376)
.|+||+|||.+.. ++...+ ..++. .++.. .++-|+.+|+|. +..+. .......+.+....+..+.
T Consensus 114 ~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~---~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~ 190 (534)
T 1llf_A 114 LPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMG---KPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVA 190 (534)
T ss_dssp EEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTT---CCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCcccCCCcccCchHHHHHHHhcC---CCEEEEEeCCCCCCCCCCCcccccccCCCchhHHHHHHHHHHHH
Confidence 5789999997633 222223 22222 22221 279999999994 22111 0112344556555555554
Q ss_pred h---CCCCCCCCCCCcEEEEecchHHHHHHHHHHhC--------CCCcceEEEeccC
Q 017180 158 N---APDSPVSSSESDLVIFGGGHAATLTVRAAKKN--------LVKPTAIAAVAPT 203 (376)
Q Consensus 158 ~---~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~--------p~~v~~lvl~~p~ 203 (376)
+ +.+ ...++|.|+|+|.||..+..+.... ...++++|+.+|.
T Consensus 191 ~ni~~fg----gDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 191 DNIAGFG----GDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp HHGGGGT----EEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred HHHHHhC----CCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 3 333 1346899999999998777665542 5678999999874
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00017 Score=68.47 Aligned_cols=105 Identities=12% Similarity=0.009 Sum_probs=67.3
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCC----CCcCCCCC--CCCCCHHHHHHHHHHHHhC---
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWP----GLGYSDRP--KMDYNADVMEKFVVDLINA--- 159 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~----G~G~S~~~--~~~~~~~~~~~~l~~~l~~--- 159 (376)
.|+||+|||.+.. ++...+.. ..|++. .++-|+.+|+| ||..+... .....+.+....+..+.+.
T Consensus 131 ~Pv~v~iHGGg~~~g~~~~~~~--~~la~~---~~~vvv~~~YRl~~~Gfl~~~~~~~~~n~gl~D~~~al~wv~~ni~~ 205 (574)
T 3bix_A 131 KPVMVYIHGGSYMEGTGNLYDG--SVLASY---GNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGF 205 (574)
T ss_dssp EEEEEECCCSSSSSCCGGGSCC--HHHHHH---HTCEEEEECCCCHHHHHCCCSSSSCCCCHHHHHHHHHHHHHHHHGGG
T ss_pred CcEEEEECCCcccCCCCCccCc--hhhhcc---CCEEEEEeCCcCcccccCcCCCCCCCCcccHHHHHHHHHHHHHHHHH
Confidence 5789999996633 22333332 345543 16999999999 44433311 2334556666666555443
Q ss_pred CCCCCCCCCCcEEEEecchHHHHHHHHHHhCC---CCcceEEEeccC
Q 017180 160 PDSPVSSSESDLVIFGGGHAATLTVRAAKKNL---VKPTAIAAVAPT 203 (376)
Q Consensus 160 l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p---~~v~~lvl~~p~ 203 (376)
.+ ....+|+|+|+|.||.++..++.... ..+.++|+.++.
T Consensus 206 fg----gdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 206 FG----GDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp GT----EEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred hC----CCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 33 13467999999999999998877433 458889998864
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00024 Score=60.83 Aligned_cols=85 Identities=12% Similarity=0.033 Sum_probs=47.1
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+..||.+||.. .. .+.+.+. ++.+...|+...|.-.. ........+.+++.+.++.+.... ...
T Consensus 74 ~~iVvafRGT~--~~-------~d~~~d~----~~~~~~~~~~~~~~vh~-Gf~~~~~~~~~~~~~~l~~~~~~~--p~~ 137 (279)
T 1tia_A 74 SAVVLAFRGSY--SV-------RNWVADA----TFVHTNPGLCDGCLAEL-GFWSSWKLVRDDIIKELKEVVAQN--PNY 137 (279)
T ss_pred CEEEEEEeCcC--CH-------HHHHHhC----CcEeecCCCCCCCccCh-hHHHHHHHHHHHHHHHHHHHHHHC--CCC
Confidence 45678889977 42 2334443 56666655532222111 111112233344444444332111 256
Q ss_pred cEEEEecchHHHHHHHHHHhC
Q 017180 170 DLVIFGGGHAATLTVRAAKKN 190 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~ 190 (376)
++++.||||||.+|..+|...
T Consensus 138 ~i~vtGHSLGGalA~l~a~~l 158 (279)
T 1tia_A 138 ELVVVGHSLGAAVATLAATDL 158 (279)
T ss_pred eEEEEecCHHHHHHHHHHHHH
Confidence 899999999999999998853
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.017 Score=49.36 Aligned_cols=126 Identities=14% Similarity=0.076 Sum_probs=77.2
Q ss_pred ceeEEEEecccC-CCCCCCcEEEecCCCCCccchHhHHHHHHHHh----hhC----------CcceEEEEeCCC-CCcCC
Q 017180 74 SINIYYEKHERE-SPDPSKNILMIPTISDVSTVEEWRLVAQDIVQ----RVG----------KVNWRATIVDWP-GLGYS 137 (376)
Q Consensus 74 g~~l~y~~~g~~-~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~----~~~----------~~~~~Vi~~D~~-G~G~S 137 (376)
+.+++|.-.... +++.+|.||.+.|.+ +++..+..+. .+.- ..+ ....+|+-+|.| |-|.|
T Consensus 33 ~~~lFywf~es~~~p~~~Pl~lWlnGGP--GcSS~~g~~~-E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD~PvGtGfS 109 (300)
T 4az3_A 33 SKHLHYWFVESQKDPENSPVVLWLNGGP--GCSSLDGLLT-EHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFS 109 (300)
T ss_dssp TEEEEEEEECCSSCTTTSCEEEEECCTT--TBCTHHHHHH-TTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTC
T ss_pred CCeEEEEEEEcCCCCCCCCEEEEECCCC--cHHHHHHHHh-cCCCceecCCCccccccCccHHhhhcchhhcCCCccccc
Confidence 556766654432 223378999999999 6666653322 1110 000 013679999976 78887
Q ss_pred CC--CCCCCCHHHHHHHHHHHHhCCCCCC-CCCCCcEEEEecchHHHHHHHHHHh----CCCCcceEEEecc
Q 017180 138 DR--PKMDYNADVMEKFVVDLINAPDSPV-SSSESDLVIFGGGHAATLTVRAAKK----NLVKPTAIAAVAP 202 (376)
Q Consensus 138 ~~--~~~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~lvG~S~Gg~ia~~~a~~----~p~~v~~lvl~~p 202 (376)
-. .....+.++.++|+..+++..-... .....+++|.|-|.||..+-.+|.. ..-.++++++.+|
T Consensus 110 y~~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg 181 (300)
T 4az3_A 110 YSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNG 181 (300)
T ss_dssp EETTCCCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESC
T ss_pred ccCCCcccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCC
Confidence 52 2234556667777766664210000 0126789999999999999998872 3345788888776
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00051 Score=58.44 Aligned_cols=84 Identities=12% Similarity=0.122 Sum_probs=47.2
Q ss_pred CcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 91 KNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
..|++.+-.+ .+...|. . +..+...++||..... ..........+.+++.+.++.+.... +..
T Consensus 73 ~~ivv~frGT--~~~~dw~-------~-----d~~~~~~~~p~~~~~~vh~gf~~~~~~l~~~~~~~l~~~~~~~--p~~ 136 (269)
T 1tgl_A 73 KTIYIVFRGS--SSIRNWI-------A-----DLTFVPVSYPPVSGTKVHKGFLDSYGEVQNELVATVLDQFKQY--PSY 136 (269)
T ss_pred CEEEEEECCC--CCHHHHH-------h-----hCceEeeeCCCCCCCEEcHHHHHHHHHHHHHHHHHHHHHHHHC--CCc
Confidence 3466665544 4444552 2 4777788888842111 11111223344444444444332110 245
Q ss_pred cEEEEecchHHHHHHHHHHhC
Q 017180 170 DLVIFGGGHAATLTVRAAKKN 190 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~ 190 (376)
++++.||||||.+|..+|...
T Consensus 137 ~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 137 KVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred eEEEEeeCHHHHHHHHHHHHH
Confidence 699999999999999998754
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0016 Score=50.08 Aligned_cols=60 Identities=22% Similarity=0.107 Sum_probs=51.5
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhccc------------------------CCceEEEeCCC-CCCCCCChHHHHHHHHH
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAK------------------------GVTKFVEVPGA-LLPQEEYPAMVAQELYQ 366 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~-H~~~~e~pe~~~~~i~~ 366 (376)
.+++||.+|+.|.+++.-..+.+.+.. .+.+++.+.++ |++..++|+...+.+..
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~~ 143 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQY 143 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHHH
Confidence 579999999999999987777665443 36788999999 99999999999999999
Q ss_pred HHHhh
Q 017180 367 FLQQT 371 (376)
Q Consensus 367 fl~~~ 371 (376)
||...
T Consensus 144 fl~~~ 148 (153)
T 1whs_B 144 FLQGK 148 (153)
T ss_dssp HHHTC
T ss_pred HHCCC
Confidence 99864
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.54 E-value=0.017 Score=48.45 Aligned_cols=121 Identities=11% Similarity=0.117 Sum_probs=68.9
Q ss_pred ceeEEEEeccc-C-CCCCCCcEEEecCCCCCccchHh-HHHHH------------------HHHhhhCCcceEEEEeCC-
Q 017180 74 SINIYYEKHER-E-SPDPSKNILMIPTISDVSTVEEW-RLVAQ------------------DIVQRVGKVNWRATIVDW- 131 (376)
Q Consensus 74 g~~l~y~~~g~-~-~~~~~~~vvllHG~~~~~~~~~~-~~~~~------------------~L~~~~~~~~~~Vi~~D~- 131 (376)
|.+++|.-... . +++.+|.||+++|.+ +++..+ ..+.+ .+.+ ..+|+-+|.
T Consensus 36 ~~~lFywf~es~~~~p~~~Pl~lWlnGGP--GcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~-----~anllfiDqP 108 (270)
T 1gxs_A 36 GRALYYWFQEADTADPAAAPLVLWLNGGP--GCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNK-----AANILFAESP 108 (270)
T ss_dssp TEEEEEEEECCCSSCGGGSCEEEEEECTT--TBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGG-----TSEEEEECCS
T ss_pred CcEEEEEEEEecCCCCCCCCEEEEecCCC--cccchhhhhHHhccCceecCCCCcceeCccchhc-----cccEEEEecc
Confidence 45677654433 1 223378899999999 666554 22210 0112 478999995
Q ss_pred CCCcCCCCC-C--CCCCHHHHHHHHHHHHhCCCCCC-CCCCCcEEEEecchHHHHHHHHHH---hC-----CCCcceEEE
Q 017180 132 PGLGYSDRP-K--MDYNADVMEKFVVDLINAPDSPV-SSSESDLVIFGGGHAATLTVRAAK---KN-----LVKPTAIAA 199 (376)
Q Consensus 132 ~G~G~S~~~-~--~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~lvG~S~Gg~ia~~~a~---~~-----p~~v~~lvl 199 (376)
.|-|.|-.. . ...+.+..++|+.++++..-... .....+++|.|.| | ..+-.+|. ++ .-.++++++
T Consensus 109 vGtGfSy~~~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G-~yvP~la~~i~~~n~~~~~inLkGi~i 186 (270)
T 1gxs_A 109 AGVGFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-G-HFIPQLSQVVYRNRNNSPFINFQGLLV 186 (270)
T ss_dssp TTSTTCEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-T-THHHHHHHHHHHTTTTCTTCEEEEEEE
T ss_pred ccccccCCCCCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-C-cchHHHHHHHHhccccccceeeeeEEE
Confidence 699998522 1 12344556666665554321000 0125689999999 5 44444443 22 245788999
Q ss_pred eccC
Q 017180 200 VAPT 203 (376)
Q Consensus 200 ~~p~ 203 (376)
.+|.
T Consensus 187 gn~~ 190 (270)
T 1gxs_A 187 SSGL 190 (270)
T ss_dssp ESCC
T ss_pred eCCc
Confidence 8873
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=96.21 E-value=0.012 Score=45.12 Aligned_cols=59 Identities=15% Similarity=0.176 Sum_probs=48.0
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhccc-----------------------------CCceEEEeCCC-CCCCCCChHHHH
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGAK-----------------------------GVTKFVEVPGA-LLPQEEYPAMVA 361 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~-H~~~~e~pe~~~ 361 (376)
.++|||..|+.|.+++.-..+.+.+.. .+.+++.+.++ |++..++|+...
T Consensus 63 girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al 142 (155)
T 4az3_B 63 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 142 (155)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHHHH
T ss_pred CceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHHHH
Confidence 679999999999999876666542111 35568888898 999999999999
Q ss_pred HHHHHHHHh
Q 017180 362 QELYQFLQQ 370 (376)
Q Consensus 362 ~~i~~fl~~ 370 (376)
+.+..||..
T Consensus 143 ~m~~~fl~g 151 (155)
T 4az3_B 143 TMFSRFLNK 151 (155)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999975
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=96.12 E-value=0.0068 Score=51.40 Aligned_cols=23 Identities=9% Similarity=0.107 Sum_probs=20.3
Q ss_pred CCcEEEEecchHHHHHHHHHHhC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKN 190 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~ 190 (376)
..++++.||||||.+|..++...
T Consensus 136 ~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 136 TYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp TCEEEEEEETHHHHHHHHHHHHH
T ss_pred CCeEEEeccChHHHHHHHHHHHH
Confidence 56899999999999999988754
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=95.84 E-value=0.013 Score=49.40 Aligned_cols=22 Identities=18% Similarity=0.288 Sum_probs=19.8
Q ss_pred CCcEEEEecchHHHHHHHHHHh
Q 017180 168 ESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
..++++.||||||.+|..+|..
T Consensus 124 ~~~i~vtGHSLGGalA~l~a~~ 145 (261)
T 1uwc_A 124 DYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp TSEEEEEEETHHHHHHHHHHHH
T ss_pred CceEEEEecCHHHHHHHHHHHH
Confidence 5689999999999999998884
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=95.75 E-value=0.022 Score=49.29 Aligned_cols=22 Identities=14% Similarity=0.157 Sum_probs=19.6
Q ss_pred CCcEEEEecchHHHHHHHHHHh
Q 017180 168 ESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
..++++.|||+||.+|..+|..
T Consensus 135 ~~~i~vtGHSLGGAlA~L~a~~ 156 (319)
T 3ngm_A 135 SFKVVSVGHSLGGAVATLAGAN 156 (319)
T ss_dssp TCEEEEEEETHHHHHHHHHHHH
T ss_pred CCceEEeecCHHHHHHHHHHHH
Confidence 6789999999999999998873
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=95.52 E-value=0.014 Score=49.00 Aligned_cols=21 Identities=24% Similarity=0.169 Sum_probs=19.2
Q ss_pred CCcEEEEecchHHHHHHHHHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
..++++.|||+||.+|..+|.
T Consensus 123 ~~~i~vtGHSLGGalA~l~a~ 143 (258)
T 3g7n_A 123 DYTLEAVGHSLGGALTSIAHV 143 (258)
T ss_dssp TCEEEEEEETHHHHHHHHHHH
T ss_pred CCeEEEeccCHHHHHHHHHHH
Confidence 578999999999999999877
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=95.32 E-value=0.032 Score=47.38 Aligned_cols=21 Identities=19% Similarity=0.308 Sum_probs=19.2
Q ss_pred CCcEEEEecchHHHHHHHHHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
..++++.|||+||.+|..+|.
T Consensus 137 ~~~l~vtGHSLGGalA~l~a~ 157 (279)
T 3uue_A 137 EKRVTVIGHSLGAAMGLLCAM 157 (279)
T ss_dssp CCCEEEEEETHHHHHHHHHHH
T ss_pred CceEEEcccCHHHHHHHHHHH
Confidence 568999999999999999886
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=95.15 E-value=0.13 Score=41.41 Aligned_cols=93 Identities=13% Similarity=0.139 Sum_probs=51.2
Q ss_pred cEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC-cCCCCCCCCC--CHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 92 NILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-GYSDRPKMDY--NADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 92 ~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~-G~S~~~~~~~--~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.||+..|.+..........+...|.++.+ +-++..++||-. |.+......| +..+-++++...++....+- +.
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~--g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~C--P~ 81 (207)
T 1g66_A 6 HVFGARETTASPGYGSSSTVVNGVLSAYP--GSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQC--PS 81 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHST--TCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHS--TT
T ss_pred EEEEEeCCCCCCCCCcccHHHHHHHHhCC--CCceEEeeccccccccccCCcchhhhHHHHHHHHHHHHHHHHHhC--CC
Confidence 45666665522111222466777776544 457889999864 2221111222 22233344444443321110 36
Q ss_pred CcEEEEecchHHHHHHHHHH
Q 017180 169 SDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~ 188 (376)
.+++|+|+|.|+.++..+..
T Consensus 82 tkivl~GYSQGA~V~~~~~~ 101 (207)
T 1g66_A 82 TKIVLVGYSQGGEIMDVALC 101 (207)
T ss_dssp CEEEEEEETHHHHHHHHHHH
T ss_pred CcEEEEeeCchHHHHHHHHh
Confidence 78999999999999988774
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=95.13 E-value=0.023 Score=48.91 Aligned_cols=33 Identities=6% Similarity=0.052 Sum_probs=24.7
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
+.+.++++... ..++++.|||+||.+|..+|..
T Consensus 142 ~~l~~~~~~~p------~~~i~vtGHSLGGalA~l~a~~ 174 (301)
T 3o0d_A 142 PKLDSVIEQYP------DYQIAVTGHSLGGAAALLFGIN 174 (301)
T ss_dssp HHHHHHHHHST------TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHCC------CceEEEeccChHHHHHHHHHHH
Confidence 34445554442 6789999999999999998873
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=95.00 E-value=0.24 Score=39.36 Aligned_cols=103 Identities=12% Similarity=-0.021 Sum_probs=59.6
Q ss_pred cEEEecCCCCCccc---hHhHHHHHHHHhhhCCcceEEEEe--CCCCCcCCC-CC--CCCCCHHHHHHHHHHHHhCCCCC
Q 017180 92 NILMIPTISDVSTV---EEWRLVAQDIVQRVGKVNWRATIV--DWPGLGYSD-RP--KMDYNADVMEKFVVDLINAPDSP 163 (376)
Q Consensus 92 ~vvllHG~~~~~~~---~~~~~~~~~L~~~~~~~~~~Vi~~--D~~G~G~S~-~~--~~~~~~~~~~~~l~~~l~~l~~~ 163 (376)
.|||.-|.+ ... ..-..+.+.|.+..+.....|..+ +||-.-... .+ .......++.+.+....+.-
T Consensus 20 ~vi~ARGT~--E~~~~G~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~C--- 94 (197)
T 3qpa_A 20 IFIYARGST--ETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKC--- 94 (197)
T ss_dssp EEEEECCTT--CCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHC---
T ss_pred EEEEeeCCC--CCCCCCcccHHHHHHHHHhcCCCceEEEeeCCCCcCCCCcccCccccHHHHHHHHHHHHHHHHHhC---
Confidence 455556655 221 112335566665443235788888 888543211 00 01112233444444444443
Q ss_pred CCCCCCcEEEEecchHHHHHHHHHHhCC----CCcceEEEecc
Q 017180 164 VSSSESDLVIFGGGHAATLTVRAAKKNL----VKPTAIAAVAP 202 (376)
Q Consensus 164 ~~~~~~~~~lvG~S~Gg~ia~~~a~~~p----~~v~~lvl~~p 202 (376)
+..+++|+|+|.|+.++-.++..-| ++|.+++++.-
T Consensus 95 ---P~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGd 134 (197)
T 3qpa_A 95 ---PDATLIAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGY 134 (197)
T ss_dssp ---TTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESC
T ss_pred ---CCCcEEEEecccccHHHHHHHhcCCHhHHhheEEEEEeeC
Confidence 3688999999999999988777544 67888888853
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=94.97 E-value=0.17 Score=40.77 Aligned_cols=93 Identities=13% Similarity=0.108 Sum_probs=51.3
Q ss_pred cEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCc-CCCCCCCCC--CHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 92 NILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLG-YSDRPKMDY--NADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 92 ~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G-~S~~~~~~~--~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.||+..|.+..........+...|.++.+ +-++..++||-.. .+......| +..+=++++...++....+- +.
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~--g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~C--P~ 81 (207)
T 1qoz_A 6 HVFGARETTVSQGYGSSATVVNLVIQAHP--GTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSC--PD 81 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHST--TEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHC--TT
T ss_pred EEEEEecCCCCCCCCcchHHHHHHHHhcC--CCceEEeeccccccccccCCccccccHHHHHHHHHHHHHHHHhhC--CC
Confidence 45666666522111222466777776543 4578889998742 221111222 22233334444443321100 36
Q ss_pred CcEEEEecchHHHHHHHHHH
Q 017180 169 SDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~ 188 (376)
.+++|+|+|.|+.++..+..
T Consensus 82 tkivl~GYSQGA~V~~~~~~ 101 (207)
T 1qoz_A 82 TQLVLVGYSQGAQIFDNALC 101 (207)
T ss_dssp SEEEEEEETHHHHHHHHHHH
T ss_pred CcEEEEEeCchHHHHHHHHh
Confidence 78999999999999988774
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=94.85 E-value=0.088 Score=40.42 Aligned_cols=67 Identities=22% Similarity=0.189 Sum_probs=51.3
Q ss_pred HHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc---------------------------CCceEEEeCCC-CCCC
Q 017180 302 FLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK---------------------------GVTKFVEVPGA-LLPQ 353 (376)
Q Consensus 302 ~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~-H~~~ 353 (376)
+...+++ .++|||..|+.|.+++.-..+.+.+.. .+.+++.+.++ |++.
T Consensus 59 ~~~Ll~~---girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP 135 (158)
T 1gxs_B 59 YRELIQA---GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVP 135 (158)
T ss_dssp HHHHHHT---TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHH
T ss_pred HHHHHHc---CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCc
Confidence 3444442 579999999999999976666543211 23567788898 9999
Q ss_pred CCChHHHHHHHHHHHHhh
Q 017180 354 EEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 354 ~e~pe~~~~~i~~fl~~~ 371 (376)
.++|+...+.+..||...
T Consensus 136 ~dqP~~al~m~~~fl~g~ 153 (158)
T 1gxs_B 136 VHRPAQAFLLFKQFLKGE 153 (158)
T ss_dssp HHCHHHHHHHHHHHHHTC
T ss_pred ccCcHHHHHHHHHHHcCC
Confidence 999999999999999864
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=94.64 E-value=0.039 Score=45.82 Aligned_cols=97 Identities=10% Similarity=0.073 Sum_probs=55.8
Q ss_pred CCcEEEecCCCCCccc----hHhHHHHHHHHhhhCCcceEEEEe-CCCCCcCCCCCCCCC--CHHHHHHHHHHHHhCCCC
Q 017180 90 SKNILMIPTISDVSTV----EEWRLVAQDIVQRVGKVNWRATIV-DWPGLGYSDRPKMDY--NADVMEKFVVDLINAPDS 162 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~----~~~~~~~~~L~~~~~~~~~~Vi~~-D~~G~G~S~~~~~~~--~~~~~~~~l~~~l~~l~~ 162 (376)
+|.|++.||.+ ... ..-..+...|.+ .+.+=-+ +||-.. ..| +..+-++++...++....
T Consensus 3 ~p~ii~ARGT~--e~~~~GpG~~~~la~~l~~-----~~~~q~Vg~YpA~~------~~y~~S~~~G~~~~~~~i~~~~~ 69 (254)
T 3hc7_A 3 KPWLFTVHGTG--QPDPLGPGLPADTARDVLD-----IYRWQPIGNYPAAA------FPMWPSVEKGVAELILQIELKLD 69 (254)
T ss_dssp CCEEEEECCTT--CCCTTSSSHHHHHHTTSTT-----TSEEEECCSCCCCS------SSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCC--CCCCCCCCcHHHHHHHHHH-----hcCCCccccccCcc------cCccchHHHHHHHHHHHHHHHHh
Confidence 67899999987 531 123344555544 3444444 355332 122 223344444444433210
Q ss_pred CCCCCCCcEEEEecchHHHHHHHHHHh-----------CCCCcceEEEec
Q 017180 163 PVSSSESDLVIFGGGHAATLTVRAAKK-----------NLVKPTAIAAVA 201 (376)
Q Consensus 163 ~~~~~~~~~~lvG~S~Gg~ia~~~a~~-----------~p~~v~~lvl~~ 201 (376)
+ =+..+++|+|+|.|+.++-.++.. ..++|.++++..
T Consensus 70 ~--CP~tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfG 117 (254)
T 3hc7_A 70 A--DPYADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWG 117 (254)
T ss_dssp H--CTTCCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEES
T ss_pred h--CCCCeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEe
Confidence 0 036789999999999999887764 234677888874
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=94.04 E-value=0.21 Score=39.84 Aligned_cols=104 Identities=8% Similarity=0.001 Sum_probs=58.4
Q ss_pred cEEEecCCCCCccc--hHhHHHHHHHHhhhCCcceEEEEe--CCCCCcCCC-CC--CCCCCHHHHHHHHHHHHhCCCCCC
Q 017180 92 NILMIPTISDVSTV--EEWRLVAQDIVQRVGKVNWRATIV--DWPGLGYSD-RP--KMDYNADVMEKFVVDLINAPDSPV 164 (376)
Q Consensus 92 ~vvllHG~~~~~~~--~~~~~~~~~L~~~~~~~~~~Vi~~--D~~G~G~S~-~~--~~~~~~~~~~~~l~~~l~~l~~~~ 164 (376)
.|||.-|.+..... ..-..+.+.|.++.+.....|..+ +||---... .+ .......++.+.+....+.-
T Consensus 27 ~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~C---- 102 (201)
T 3dcn_A 27 IYIFARASTEPGNMGISAGPIVADALERIYGANDVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKC---- 102 (201)
T ss_dssp EEEEECCTTCCTTTCSSHHHHHHHHHHHHHCGGGEEEEECCTTCCCCSGGGGSTTSSCHHHHHHHHHHHHHHHHHC----
T ss_pred EEEEecCCCCCCCCCccccHHHHHHHHHhcCCCceEEEEeCCCccccCCcccccCCCHHHHHHHHHHHHHHHHHhC----
Confidence 45555665511111 112346666666543225788888 788532111 00 01112333444444444443
Q ss_pred CCCCCcEEEEecchHHHHHHHHHHhCC----CCcceEEEec
Q 017180 165 SSSESDLVIFGGGHAATLTVRAAKKNL----VKPTAIAAVA 201 (376)
Q Consensus 165 ~~~~~~~~lvG~S~Gg~ia~~~a~~~p----~~v~~lvl~~ 201 (376)
+..+++|+|+|.|+.++-.++..-| ++|.+++++.
T Consensus 103 --P~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfG 141 (201)
T 3dcn_A 103 --PNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFG 141 (201)
T ss_dssp --TTSEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEET
T ss_pred --CCCcEEEEeecchhHHHHHHHhcCChhhhhheEEEEEee
Confidence 3688999999999999988766433 4677888875
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=92.45 E-value=0.57 Score=39.97 Aligned_cols=91 Identities=11% Similarity=0.100 Sum_probs=52.1
Q ss_pred HHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC---CCCC--CHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHH
Q 017180 109 RLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP---KMDY--NADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLT 183 (376)
Q Consensus 109 ~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~---~~~~--~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia 183 (376)
..+...|.++.+.....|+.++|+-.-.-..+ ...| +..+=++++...++....+ =...+++|+|+|.|+.++
T Consensus 70 ~~v~~~L~~~~~g~~v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~~~~~~~i~~~~~~--CP~TkiVL~GYSQGA~V~ 147 (302)
T 3aja_A 70 SNISKPLAEQFGPDRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDR--CPLTSYVIAGFSQGAVIA 147 (302)
T ss_dssp HHHHHHHHHHSCTTTEEEEECCCCCCCCCTTTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHH
T ss_pred HHHHHHHHHHcCCCcceEEeccccccccccccccccccccccHHHHHHHHHHHHHHHHhh--CCCCcEEEEeeCchHHHH
Confidence 45566666544323577889998865321000 0111 2233333444444332100 036789999999999999
Q ss_pred HHHHHh--------CCCCcceEEEec
Q 017180 184 VRAAKK--------NLVKPTAIAAVA 201 (376)
Q Consensus 184 ~~~a~~--------~p~~v~~lvl~~ 201 (376)
-.++.. .+++|.+++|+.
T Consensus 148 ~~~~~~i~~g~~~~~~~~V~aVvLfG 173 (302)
T 3aja_A 148 GDIASDIGNGRGPVDEDLVLGVTLIA 173 (302)
T ss_dssp HHHHHHHHTTCSSSCGGGEEEEEEES
T ss_pred HHHHHhccCCCCCCChHHEEEEEEEe
Confidence 887752 246788888875
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=91.47 E-value=0.19 Score=44.09 Aligned_cols=21 Identities=14% Similarity=0.283 Sum_probs=19.1
Q ss_pred CCcEEEEecchHHHHHHHHHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
..++++.|||+||.+|..+|.
T Consensus 165 ~~~i~vtGHSLGGAlA~l~a~ 185 (346)
T 2ory_A 165 KAKICVTGHSKGGALSSTLAL 185 (346)
T ss_dssp CEEEEEEEETHHHHHHHHHHH
T ss_pred CceEEEecCChHHHHHHHHHH
Confidence 467999999999999999887
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=90.96 E-value=1.4 Score=34.56 Aligned_cols=103 Identities=9% Similarity=0.023 Sum_probs=56.0
Q ss_pred cEEEecCCCCCccc--hHhHHHHHHHHhhhCCcceEEEEeC--CCCCcCCC-CCCC--CCCHHHHHHHHHHHHhCCCCCC
Q 017180 92 NILMIPTISDVSTV--EEWRLVAQDIVQRVGKVNWRATIVD--WPGLGYSD-RPKM--DYNADVMEKFVVDLINAPDSPV 164 (376)
Q Consensus 92 ~vvllHG~~~~~~~--~~~~~~~~~L~~~~~~~~~~Vi~~D--~~G~G~S~-~~~~--~~~~~~~~~~l~~~l~~l~~~~ 164 (376)
.|||.-|.+..... ..-..+.+.|.+..+ ....|..++ ||---... .+.. .-..++..+.+....+.-
T Consensus 16 ~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~~-~~v~v~~V~~~YpA~~~~~~~~~~s~~~g~~~~~~~i~~~~~~C---- 90 (187)
T 3qpd_A 16 TFIFARASTEPGLLGISTGPAVCNRLKLARS-GDVACQGVGPRYTADLPSNALPEGTSQAAIAEAQGLFEQAVSKC---- 90 (187)
T ss_dssp EEEEECCTTCCTTTCSSHHHHHHHHHHHHST-TCEEEEECCSSCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHC----
T ss_pred EEEEeeCCCCCCCCCccccHHHHHHHHHHcC-CCceEEeeCCcccCcCccccccccchhHHHHHHHHHHHHHHHhC----
Confidence 45555665511111 122345666665432 147899998 88532110 0000 011222223333333333
Q ss_pred CCCCCcEEEEecchHHHHHHHHHHhCC----CCcceEEEec
Q 017180 165 SSSESDLVIFGGGHAATLTVRAAKKNL----VKPTAIAAVA 201 (376)
Q Consensus 165 ~~~~~~~~lvG~S~Gg~ia~~~a~~~p----~~v~~lvl~~ 201 (376)
+..+++|+|+|.|+.++-.++..-| ++|.++++..
T Consensus 91 --P~tkivl~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfG 129 (187)
T 3qpd_A 91 --PDTQIVAGGYSQGTAVMNGAIKRLSADVQDKIKGVVLFG 129 (187)
T ss_dssp --TTCEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEES
T ss_pred --CCCcEEEEeeccccHHHHhhhhcCCHhhhhhEEEEEEee
Confidence 3688999999999999988766433 4678888875
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=89.08 E-value=0.066 Score=47.82 Aligned_cols=21 Identities=24% Similarity=0.306 Sum_probs=18.7
Q ss_pred CcEEEEecchHHHHHHHHHHh
Q 017180 169 SDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
.++++.|||+||.+|..+|..
T Consensus 228 ~~I~vTGHSLGGALA~L~A~~ 248 (419)
T 2yij_A 228 VSITICGHSLGAALATLSATD 248 (419)
Confidence 579999999999999998874
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=88.98 E-value=0.77 Score=41.84 Aligned_cols=69 Identities=16% Similarity=0.240 Sum_probs=51.9
Q ss_pred HHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc-----------------------------CCceEEEeCCC-
Q 017180 300 EEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK-----------------------------GVTKFVEVPGA- 349 (376)
Q Consensus 300 ~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~- 349 (376)
..+.+.+++- .++|||..|+.|.+++.-..+.+.+.. .+.+++.+.++
T Consensus 351 ~~~~~LL~~~--girVlIYsGD~D~icn~~Gt~~wi~~L~~~~~~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~tV~gAG 428 (452)
T 1ivy_A 351 SQYLKLLSSQ--KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAG 428 (452)
T ss_dssp HHHHHHHHHT--CCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCC
T ss_pred HHHHHHHhcc--CceEEEEeCCCCccCCcHHHHHHHHhcCCcccccceeeeeccCCCCcccceEEEEEcceEEEEECCCc
Confidence 3345556542 469999999999999976666543211 23567788898
Q ss_pred CCCCCCChHHHHHHHHHHHHh
Q 017180 350 LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 350 H~~~~e~pe~~~~~i~~fl~~ 370 (376)
|++..++|+...+.+..||..
T Consensus 429 HmVP~dqP~~al~m~~~fl~g 449 (452)
T 1ivy_A 429 HMVPTDKPLAAFTMFSRFLNK 449 (452)
T ss_dssp SSHHHHCHHHHHHHHHHHHTT
T ss_pred ccCcccChHHHHHHHHHHhcC
Confidence 999999999999999999974
|
| >3pa8_A Toxin B; CLAN CD cysteine protease, protease, toxin-peptide in complex; HET: 621 IHP; 2.00A {Clostridium difficile} PDB: 3pee_B* | Back alignment and structure |
|---|
Probab=83.26 E-value=0.63 Score=37.57 Aligned_cols=52 Identities=12% Similarity=0.242 Sum_probs=35.6
Q ss_pred EeCCCCCcCCCCCC---CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchH
Q 017180 128 IVDWPGLGYSDRPK---MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHA 179 (376)
Q Consensus 128 ~~D~~G~G~S~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~G 179 (376)
-+-+-|||+++... ..++.++++.-|..|.+.++.........+.|+|+||-
T Consensus 104 RwqlVGHGr~e~n~~~fag~sadeLa~~L~~f~~~~~~~~~pK~i~IsLvGCsL~ 158 (254)
T 3pa8_A 104 KLTFIGHGKDEFNTDIFAGFDVDSLSTEIEAAIDLAKEDISPKSIEINLLGCNMF 158 (254)
T ss_dssp EEEEECCCCSSCCSSEETTEEHHHHHHHHHHHHHHHTTTCCCSEEEEEEESSSCC
T ss_pred EEEEEecCcCCCCcceeccCCHHHHHHHHHHHHHHHhhccCCCCceEEEEeeccc
Confidence 34455999987332 47889999999999988876432111224788998874
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=81.49 E-value=1.4 Score=35.33 Aligned_cols=98 Identities=8% Similarity=-0.017 Sum_probs=55.2
Q ss_pred cEEEecCCCCCcc-chHhHHHHHH-HHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 92 NILMIPTISDVST-VEEWRLVAQD-IVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 92 ~vvllHG~~~~~~-~~~~~~~~~~-L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
.||+..|.+.... ......++.. |.+.. +-+...++||--- . .. + .+-++++...++....+- +..
T Consensus 10 ~vi~ARGT~E~~~~G~~g~~~~~~vl~~~~---g~~~~~V~YpA~~---~--y~-S-~~G~~~~~~~i~~~~~~C--P~t 77 (205)
T 2czq_A 10 VLINTRGTGEPQGQSAGFRTMNSQITAALS---GGTIYNTVYTADF---S--QN-S-AAGTADIIRRINSGLAAN--PNV 77 (205)
T ss_dssp EEEEECCTTCCSSSCTTTHHHHHHHHHHSS---SEEEEECCSCCCT---T--CC-C-HHHHHHHHHHHHHHHHHC--TTC
T ss_pred EEEEecCCCCCCCCCcccHHHHHHHHHhcc---CCCceeecccccC---C--Cc-C-HHHHHHHHHHHHHHHhhC--CCC
Confidence 4555566552111 1124456666 65532 3345777877421 1 11 3 444555555544431000 367
Q ss_pred cEEEEecchHHHHHHHHHHhC--C----CCcceEEEec
Q 017180 170 DLVIFGGGHAATLTVRAAKKN--L----VKPTAIAAVA 201 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~--p----~~v~~lvl~~ 201 (376)
+++|+|+|.|+.++-.++..- + ++|.+++|+.
T Consensus 78 kivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfG 115 (205)
T 2czq_A 78 CYILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIG 115 (205)
T ss_dssp EEEEEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEES
T ss_pred cEEEEeeCchhHHHHHHHHhccCChhhhhhEEEEEEEe
Confidence 899999999999988876543 3 3688888875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 376 | ||||
| d1qo7a_ | 394 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Asperg | 3e-06 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 5e-05 | |
| d1mj5a_ | 298 | c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomona | 0.002 | |
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 0.003 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 0.003 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 0.003 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 0.004 |
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Score = 46.2 bits (108), Expect = 3e-06
Identities = 25/322 (7%), Positives = 64/322 (19%), Gaps = 27/322 (8%)
Query: 67 QWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNW-- 124
Q+ + + I++ + + I ++ E+ + Q +
Sbjct: 84 QFTTEIEGLTIHF-AALFSEREDAVPIALLHGWPGSFV--EFYPILQLFREEYTPETLPF 140
Query: 125 RATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTV 184
+ PG +S P +D + + + S + G +
Sbjct: 141 HLVVPSLPGYTFSSGPPLDKDFG-LMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLL 199
Query: 185 RAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLL-------------RGTLRA 231
I + E +
Sbjct: 200 GVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGIARMEKFMTDGLAYAMEHSTRPST 259
Query: 232 PGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTG 291
G + + + + + + + + T
Sbjct: 260 IGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYRETTPTA 319
Query: 292 LLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-L 350
L +L P + + F +
Sbjct: 320 SAPN-----GATMLQKELYIHKPFGFSFFPKDL--CPVPRSWIATTGNLVFFRDHAEGGH 372
Query: 351 LPQEEYPAMVAQELYQFLQQTF 372
E P + +L F++Q +
Sbjct: 373 FAALERPRELKTDLTAFVEQVW 394
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 42.2 bits (97), Expect = 5e-05
Identities = 31/298 (10%), Positives = 68/298 (22%), Gaps = 12/298 (4%)
Query: 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWP 132
+ ++ + + +L++ + + W + +R+ D
Sbjct: 8 GDVELWSDDFGDPADPA---LLLVMGGN--LSALGWP---DEFARRLADGGLHVIRYDHR 59
Query: 133 GLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV 192
G S + + D + D + + G + L
Sbjct: 60 DTGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLS 119
Query: 193 KPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQ 252
T + I + M + +
Sbjct: 120 SLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRV 179
Query: 253 YKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGK 312
K + S +R+ A V A + + E
Sbjct: 180 SKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLP---PPSRAAELREVT 236
Query: 313 LPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGAL-LPQEEYPAMVAQELYQFLQ 369
+P LV+ E P + L G + E+PG +A+ + +
Sbjct: 237 VPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGHALPSSVHGPLAEVILAHTR 294
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Score = 37.2 bits (84), Expect = 0.002
Identities = 37/299 (12%), Positives = 75/299 (25%), Gaps = 22/299 (7%)
Query: 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWP 132
+ Y + + DP IL ++ WR + R D
Sbjct: 16 KGRRMAYI--DEGTGDP---ILFQHGNP--TSSYLWRNIMPHCAGL-----GRLIACDLI 63
Query: 133 GLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV 192
G+G SD+ D ++A + + +++ +A A +
Sbjct: 64 GMGDSDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRER 123
Query: 193 KPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQ 252
A +D + + G + +L S+
Sbjct: 124 VQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSE 183
Query: 253 YKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGK 312
+ Y P + ++ PA + D E + +
Sbjct: 184 AEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAE 243
Query: 313 LPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQT 371
L R + + V GA QE+ P + + F+++
Sbjct: 244 PGALT------TGRMRDFCRTWPNQT----EITVAGAHFIQEDSPDEIGAAIAAFVRRL 292
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.0 bits (84), Expect = 0.003
Identities = 26/270 (9%), Positives = 64/270 (23%), Gaps = 19/270 (7%)
Query: 103 STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDS 162
+ +R + + I + T++D S RP + + VV ++
Sbjct: 13 DSSYSFRHLLEYINETHP--GTVVTVLDLFDGRESLRP-LWEQVQGFREAVVPIMAKAPQ 69
Query: 163 PVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSM-ETR 221
V + + + + P +G +
Sbjct: 70 GV-------HLICYSQGGLVCRALLSVM---DDHNVDSFISLSSPQMGQYGDTDYLKWLF 119
Query: 222 YGLLRGTLRAPGVGWMMYNMLVSN--EKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRK 279
+R L + N + S + + ++
Sbjct: 120 PTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKN 179
Query: 280 GARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG 339
R + G D V + + F + +L + + R ++ L
Sbjct: 180 FLRVGHLVLIGGPDDGVITPWQ-SSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGA 238
Query: 340 VTKFVEVPGAL-LPQEEYPAMVAQELYQFL 368
+ + G + + +L
Sbjct: 239 I-VRCPMAGISHTAWHSNRTLYETCIEPWL 267
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 36.8 bits (83), Expect = 0.003
Identities = 14/137 (10%), Positives = 29/137 (21%), Gaps = 2/137 (1%)
Query: 236 WMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDP 295
LV+ Q+ + + T + +
Sbjct: 173 TAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQA 232
Query: 296 VNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGA-KGVTKFVEVPGA-LLPQ 353
F + + M +K G + +E+ A Q
Sbjct: 233 CIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQ 292
Query: 354 EEYPAMVAQELYQFLQQ 370
E + + L F +
Sbjct: 293 EFGEQVAREALKHFAET 309
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 36.7 bits (83), Expect = 0.003
Identities = 44/297 (14%), Positives = 84/297 (28%), Gaps = 46/297 (15%)
Query: 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLG 135
NI++ + + +++++ E WR + +++ + +VD PG G
Sbjct: 1 NIWW----QTKGQGNVHLVLLHGWG--LNAEVWRCIDEELSSH-----FTLHLVDLPGFG 49
Query: 136 YSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPT 195
S AD+ E + APD + S + A T R V +
Sbjct: 50 RSRGFGALSLADMAEAVL---QQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASS 106
Query: 196 AIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKS 255
+ W G P V + R R + M + +A++ +
Sbjct: 107 PCFSARDEWPGIKPDVLAGFQQQLSDD-QQRTVERFLALQTMGTETARQDARALKKTVLA 165
Query: 256 HVYSNPDNVTPGIVESRYA-LTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLP 314
D + G+ + L + +P L G LD +
Sbjct: 166 LPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVP---------------- 209
Query: 315 LLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGAL-LPQEEYPAMVAQELYQFLQQ 370
+ + ++ A P +PA L Q+
Sbjct: 210 ---------RKVVPMLDKLWPHSE----SYIFAKAAHAPFISHPAEFCHLLVALKQR 253
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 36.4 bits (82), Expect = 0.004
Identities = 45/298 (15%), Positives = 84/298 (28%), Gaps = 25/298 (8%)
Query: 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWP 132
++Y P +L + ++ WR + + R D
Sbjct: 15 LGERMHYVDVGPRDGTP---VLFLHGNP--TSSYLWRNIIPHVAPS-----HRCIAPDLI 64
Query: 133 GLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV 192
G+G SD+P +DY D +++ I A V+ + L AK+N
Sbjct: 65 GMGKSDKPDLDYFFDDHVRYLDAFIEALGLEEV------VLVIHDWGSALGFHWAKRNPE 118
Query: 193 KPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQ 252
+ IA + P + + + R + + V
Sbjct: 119 RVKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGV--------L 170
Query: 253 YKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGK 312
K V + E R+ P + +
Sbjct: 171 PKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSP 230
Query: 313 LPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGAL-LPQEEYPAMVAQELYQFLQ 369
+P L+ AE L + K V++ L QE+ P ++ E+ ++L
Sbjct: 231 VPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWLP 288
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 376 | |||
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 100.0 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 100.0 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.98 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.97 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.97 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.96 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.96 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.95 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.94 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.94 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.92 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.9 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.89 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.89 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.89 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.88 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.87 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.86 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.85 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.84 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.83 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.83 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.83 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.83 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.81 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.8 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.79 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.73 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.73 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.73 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.72 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.72 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.71 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.69 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.69 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.67 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.67 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.65 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.62 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.62 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.57 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.5 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.5 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.4 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.38 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.36 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.33 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.3 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.29 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.22 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.17 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.14 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.13 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.04 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 98.99 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.95 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.87 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 98.87 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 98.79 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.67 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.63 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.51 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.45 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.32 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.26 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 98.26 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.15 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 98.1 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.02 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 96.68 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 96.64 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 96.55 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 96.26 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 96.24 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 96.21 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 96.13 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 95.83 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 95.77 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 95.66 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 95.46 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 95.4 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 95.4 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 95.34 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 95.12 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 91.79 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 91.15 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 87.87 |
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=1.8e-37 Score=269.73 Aligned_cols=278 Identities=16% Similarity=0.136 Sum_probs=191.9
Q ss_pred CCCccceEEeecCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC
Q 017180 60 PSKTGNWQWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR 139 (376)
Q Consensus 60 ~~~~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~ 139 (376)
|.+.+++... |.+|+|.+.|+++ +|+|||+||++ ++...|+.+++.|++ +|+||++|+||||.|+.
T Consensus 6 p~~~~~i~~~----g~~i~y~~~G~~~---~p~lvllHG~~--~~~~~~~~~~~~L~~-----~~~vi~~d~~G~G~S~~ 71 (291)
T d1bn7a_ 6 PFDPHYVEVL----GERMHYVDVGPRD---GTPVLFLHGNP--TSSYLWRNIIPHVAP-----SHRCIAPDLIGMGKSDK 71 (291)
T ss_dssp CCCCEEEEET----TEEEEEEEESCSS---SSCEEEECCTT--CCGGGGTTTHHHHTT-----TSCEEEECCTTSTTSCC
T ss_pred CCCCeEEEEC----CEEEEEEEeCCCC---CCeEEEECCCC--CCHHHHHHHHHHHhc-----CCEEEEEeCCCCccccc
Confidence 4455555554 9999999999765 78999999999 999999999999987 89999999999999998
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchh
Q 017180 140 PKMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSME 219 (376)
Q Consensus 140 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~ 219 (376)
+...++.+++++++.+++++++ .++++++||||||.+++.+|.++|+++++++++++.... +.... ..
T Consensus 72 ~~~~~~~~~~~~~l~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~--~~~~~----~~ 139 (291)
T d1bn7a_ 72 PDLDYFFDDHVRYLDAFIEALG------LEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPI--PTWDE----WP 139 (291)
T ss_dssp CSCCCCHHHHHHHHHHHHHHTT------CCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCB--CSGGG----SC
T ss_pred cccccchhHHHHHHhhhhhhhc------cccccccccccccchhHHHHHhCCcceeeeeeeccccCC--ccchh----hh
Confidence 8889999999999999999997 788999999999999999999999999999999764311 11000 01
Q ss_pred hhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCC--
Q 017180 220 TRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVN-- 297 (376)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 297 (376)
.........+............ ............ . ......+..+.+...............+.........
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (291)
T d1bn7a_ 140 EFARETFQAFRTADVGRELIID---QNAFIEGVLPKC-V--VRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPA 213 (291)
T ss_dssp HHHHHHHHHHTSTTHHHHHHTT---SCHHHHTHHHHT-C--SSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSH
T ss_pred hhhhhHHHHHhhhhhHHHhhhh---hhhhHHhhhhhh-c--cccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhc
Confidence 1111111111111111111110 011111111111 1 1133344444333333222222222222211111100
Q ss_pred ----cHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 298 ----SREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 298 ----~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
..+...+.++++ ++|+++|+|++|.+++.+..+++.+..+++++++++++ |++++|+|+++++.|.+||+.+
T Consensus 214 ~~~~~~~~~~~~~~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 214 NIVALVEAYMNWLHQS--PVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPGL 290 (291)
T ss_dssp HHHHHHHHHHHHHHHC--CSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCGGGTCHHHHHHHHHHHSGGG
T ss_pred hhhhhhhhhhhhhhcC--CCCEEEEEeCCCCCcCHHHHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHHhh
Confidence 011234456778 99999999999999999999999999999999999998 9999999999999999999875
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=3.7e-37 Score=264.63 Aligned_cols=254 Identities=14% Similarity=0.159 Sum_probs=176.6
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVME 150 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 150 (376)
.||.+++|.+.|+ +|||||+||+++. .+...|..+++.|++ +|+|+++|+||||.|+.+...++.++++
T Consensus 9 ~dg~~l~y~~~G~-----g~~vvllHG~~~~~~~~~~~~~~~~~l~~-----~~~v~~~D~~G~G~S~~~~~~~~~~~~~ 78 (268)
T d1j1ia_ 9 AGGVETRYLEAGK-----GQPVILIHGGGAGAESEGNWRNVIPILAR-----HYRVIAMDMLGFGKTAKPDIEYTQDRRI 78 (268)
T ss_dssp ETTEEEEEEEECC-----SSEEEEECCCSTTCCHHHHHTTTHHHHTT-----TSEEEEECCTTSTTSCCCSSCCCHHHHH
T ss_pred ECCEEEEEEEEcC-----CCeEEEECCCCCCccHHHHHHHHHHHHhc-----CCEEEEEcccccccccCCcccccccccc
Confidence 4599999999997 7789999999822 133568889999987 8999999999999999888889999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
+++.+++++++ ...+++++||||||.+++.+|.++|++|+++|+++|........ ........
T Consensus 79 ~~~~~~i~~l~-----~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~------------~~~~~~~~ 141 (268)
T d1j1ia_ 79 RHLHDFIKAMN-----FDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIH------------EDLRPIIN 141 (268)
T ss_dssp HHHHHHHHHSC-----CSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------------------
T ss_pred ccchhhHHHhh-----hcccceeeeccccccccchhhccChHhhheeeecCCCccccccc------------hhhhhhhh
Confidence 99999999986 34679999999999999999999999999999999853211000 00000111
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHH---hhccCCCCCcHHHHHHHHh
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAF---LTGLLDPVNSREEFLQLFA 307 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 307 (376)
.... ..... ........+.....++..................... ........ . ..+.++
T Consensus 142 ~~~~-----------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~l~ 205 (268)
T d1j1ia_ 142 YDFT-----------REGMV-HLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLF-Y---DPEFIR 205 (268)
T ss_dssp CCSC-----------HHHHH-HHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSB-C---CHHHHT
T ss_pred hhhh-----------hhhhH-HHHHHHhhhhhhhhhhhhHHHHHhhhhhhhhhhhhhhhhhhhcccccc-c---hhhhHh
Confidence 1000 11111 0111111122223333333222222211111111111 11111111 0 234577
Q ss_pred cccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 308 DLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 308 ~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
++ ++|+++|+|++|.+++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+||.+
T Consensus 206 ~i--~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 206 KV--QVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATLSFLSL 267 (268)
T ss_dssp TC--CSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred hC--CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 88 99999999999999999999999999999999999998 999999999999999999975
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=2e-35 Score=257.70 Aligned_cols=269 Identities=12% Similarity=0.102 Sum_probs=176.2
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhH-HHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC---CCCCHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWR-LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK---MDYNADV 148 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~-~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~---~~~~~~~ 148 (376)
+|++|+|.+.|+++ +|+|||+||++ .+...|. .+++.|.+. ||+|+++|+||||+|+.+. ..++.++
T Consensus 8 g~~~i~y~~~G~~~---~p~vvl~HG~~--~~~~~~~~~~~~~l~~~----g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 78 (297)
T d1q0ra_ 8 GDVELWSDDFGDPA---DPALLLVMGGN--LSALGWPDEFARRLADG----GLHVIRYDHRDTGRSTTRDFAAHPYGFGE 78 (297)
T ss_dssp TTEEEEEEEESCTT---SCEEEEECCTT--CCGGGSCHHHHHHHHTT----TCEEEEECCTTSTTSCCCCTTTSCCCHHH
T ss_pred CCEEEEEEEecCCC---CCEEEEECCCC--cChhHHHHHHHHHHHhC----CCEEEEEeCCCCcccccccccccccccch
Confidence 48999999999765 78999999999 9888884 567788775 9999999999999998432 4589999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
+++|+..++++++ .++++++||||||.+++.+|.++|++|+++|++++....... ...........
T Consensus 79 ~~~d~~~ll~~l~------~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~--------~~~~~~~~~~~ 144 (297)
T d1q0ra_ 79 LAADAVAVLDGWG------VDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDF--------DANIERVMRGE 144 (297)
T ss_dssp HHHHHHHHHHHTT------CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCH--------HHHHHHHHHTC
T ss_pred hhhhhcccccccc------ccceeeccccccchhhhhhhcccccceeeeEEEccccccccc--------hhhhHHHhhhh
Confidence 9999999999997 788999999999999999999999999999999875311100 00000000000
Q ss_pred hc---cCchhhHH-------hhhhhccHHHHHHH-HH-hcccCCCCCCChHHHHHHHH-HHhccCC--CchhHHHhhccC
Q 017180 229 LR---APGVGWMM-------YNMLVSNEKAIQSQ-YK-SHVYSNPDNVTPGIVESRYA-LTKRKGA--RYVPAAFLTGLL 293 (376)
Q Consensus 229 ~~---~~~~~~~~-------~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~ 293 (376)
.. .+...... ..........+... .. .................... ....... ............
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (297)
T d1q0ra_ 145 PTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLP 224 (297)
T ss_dssp CCSSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCC
T ss_pred hhhhhhhhhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhc
Confidence 00 00000000 00000000000000 00 00111111222222222211 1111110 000011111111
Q ss_pred CCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 294 DPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 294 ~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
. .+....+++| ++||++|+|++|.+++.+..+.+.+..|++++++++++ |+++.|+|+++++.|.+||++.
T Consensus 225 ~-----~~~~~~l~~i--~~Pvlvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~ 296 (297)
T d1q0ra_ 225 P-----PSRAAELREV--TVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGHALPSSVHGPLAEVILAHTRSA 296 (297)
T ss_dssp C-----GGGGGGGGGC--CSCEEEEEETTCSSSCTTHHHHHHHTSTTEEEEEETTCCSSCCGGGHHHHHHHHHHHHHHT
T ss_pred c-----ccchhhhhcc--CCceEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCcchhhCHHHHHHHHHHHHHhh
Confidence 1 1134567888 99999999999999999999999999999999999998 9999999999999999999864
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=2.8e-36 Score=261.25 Aligned_cols=266 Identities=14% Similarity=0.126 Sum_probs=175.6
Q ss_pred EeecCCceeEEEEecccCCCCCCCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC-C--
Q 017180 68 WKFKENSINIYYEKHERESPDPSKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM-D-- 143 (376)
Q Consensus 68 ~~~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~-~-- 143 (376)
-++..+++++||...|+++ +|+|||+||+++. .+...|+.+++.|++ +|+|+++|+||||.|+.+.. .
T Consensus 7 ~~~~~~~~~~h~~~~G~~~---~p~ivllHG~~~~~~~~~~~~~~~~~L~~-----~~~vi~~D~~G~G~S~~~~~~~~~ 78 (281)
T d1c4xa_ 7 KRFPSGTLASHALVAGDPQ---SPAVVLLHGAGPGAHAASNWRPIIPDLAE-----NFFVVAPDLIGFGQSEYPETYPGH 78 (281)
T ss_dssp EEECCTTSCEEEEEESCTT---SCEEEEECCCSTTCCHHHHHGGGHHHHHT-----TSEEEEECCTTSTTSCCCSSCCSS
T ss_pred EEEccCCEEEEEEEEecCC---CCEEEEECCCCCCCcHHHHHHHHHHHHhC-----CCEEEEEeCCCCcccccccccccc
Confidence 3445557899999999876 8999999999832 233568899999998 89999999999999985432 2
Q ss_pred --CCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhh
Q 017180 144 --YNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETR 221 (376)
Q Consensus 144 --~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~ 221 (376)
.+.+++++++.+++++++ .++++++||||||.+++.+|.++|++|+++|++++........ ....
T Consensus 79 ~~~~~~~~~~~i~~~i~~~~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~-------~~~~ 145 (281)
T d1c4xa_ 79 IMSWVGMRVEQILGLMNHFG------IEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNAR-------PPEL 145 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHT------CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSC-------CHHH
T ss_pred chhhHHHhhhhccccccccc------cccceeccccccccccccccccccccccceEEeccccCccccc-------hhHH
Confidence 345677888999999986 7889999999999999999999999999999999853111100 0111
Q ss_pred hHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCC--hHHHHHHHHHHhccCCCchhHHHhhccCCCCCcH
Q 017180 222 YGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVT--PGIVESRYALTKRKGARYVPAAFLTGLLDPVNSR 299 (376)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (376)
..... ....+ .....+..+. ....++.... .+................................
T Consensus 146 ~~~~~-~~~~~------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (281)
T d1c4xa_ 146 ARLLA-FYADP------------RLTPYRELIH-SFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESL 211 (281)
T ss_dssp HHHHT-GGGSC------------CHHHHHHHHH-TTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGG
T ss_pred HHHHH-hhhhc------------ccchhhhhhh-hhcccccccchhhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhh
Confidence 11111 11000 0111111111 1122222111 1122222221111111111111111111100011
Q ss_pred HHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 300 EEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 300 ~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
......+.++ ++|+|+|+|++|.+++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+||+.
T Consensus 212 ~~~~~~l~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 281 (281)
T d1c4xa_ 212 VIPPATLGRL--PHDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 281 (281)
T ss_dssp CCCHHHHTTC--CSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred ccchhhhhhh--ccceEEEEeCCCCCcCHHHHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHHHhCC
Confidence 1133457788 99999999999999999999999999999999999998 999999999999999999973
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=1.2e-35 Score=255.47 Aligned_cols=249 Identities=14% Similarity=0.174 Sum_probs=174.0
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVME 150 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~ 150 (376)
+|++++|++.|+ +||||||||++.. .+...|..+++.|++ +|+|+++|+||||.|+.+ ...++.++++
T Consensus 11 ~G~~~~Y~~~G~-----G~pvvllHG~~~~~~~~~~~~~~~~~l~~-----~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~ 80 (271)
T d1uk8a_ 11 AGVLTNYHDVGE-----GQPVILIHGSGPGVSAYANWRLTIPALSK-----FYRVIAPDMVGFGFTDRPENYNYSKDSWV 80 (271)
T ss_dssp TTEEEEEEEECC-----SSEEEEECCCSTTCCHHHHHTTTHHHHTT-----TSEEEEECCTTSTTSCCCTTCCCCHHHHH
T ss_pred CCEEEEEEEEee-----CCeEEEECCCCCCccHHHHHHHHHHHHhC-----CCEEEEEeCCCCCCccccccccccccccc
Confidence 499999999997 7899999999832 233457788899987 899999999999999855 4567889999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
+++..++++++ .++++|+||||||.+++.+|.++|+++.++|++++....... .... ... ...
T Consensus 81 ~~~~~~~~~l~------~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~--------~~~~-~~~--~~~ 143 (271)
T d1uk8a_ 81 DHIIGIMDALE------IEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDV--------TEGL-NAV--WGY 143 (271)
T ss_dssp HHHHHHHHHTT------CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCC--------CHHH-HHH--HTC
T ss_pred hhhhhhhhhhc------CCCceEeeccccceeehHHHHhhhccchheeecccCCCcccc--------hhhh-hhh--hhc
Confidence 99999999997 789999999999999999999999999999999875321100 0000 000 000
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCC--------chhHHHhhccCCCCCcHHHH
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGAR--------YVPAAFLTGLLDPVNSREEF 302 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 302 (376)
.+. ...++... ............................ ......+..... .
T Consensus 144 ~~~------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 203 (271)
T d1uk8a_ 144 TPS------------IENMRNLL-DIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALAS-------S 203 (271)
T ss_dssp CSC------------HHHHHHHH-HHHCSCGGGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHHCC-------C
T ss_pred cch------------hHHHHHHH-HHHhhhcccchhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhccc-------c
Confidence 000 11111111 1111112223333333222222211100 001111111111 2
Q ss_pred HHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 303 LQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 303 ~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
.+.+.++ ++|+++|+|++|.+++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+||++
T Consensus 204 ~~~l~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 204 DEDIKTL--PNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 270 (271)
T ss_dssp HHHHTTC--CSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHTHHHHHHHHHHHHHT
T ss_pred HHHHHhh--ccceeEEecCCCCCcCHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHHHHHHhc
Confidence 3456788 99999999999999999999999999999999999998 999999999999999999986
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=5.1e-36 Score=260.63 Aligned_cols=276 Identities=13% Similarity=0.093 Sum_probs=180.7
Q ss_pred eecCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC----CCC
Q 017180 69 KFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK----MDY 144 (376)
Q Consensus 69 ~~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~----~~~ 144 (376)
.+..+|++|+|.+.|+ +|+|||+||++ ++...|..+++.|.+ +|+|+++|+||||.|+.+. ..+
T Consensus 12 ~~~~~~~~l~y~~~G~-----gp~vv~lHG~~--~~~~~~~~~~~~l~~-----~~~vi~~D~~G~G~s~~~~~~~~~~~ 79 (293)
T d1ehya_ 12 EVQLPDVKIHYVREGA-----GPTLLLLHGWP--GFWWEWSKVIGPLAE-----HYDVIVPDLRGFGDSEKPDLNDLSKY 79 (293)
T ss_dssp EEECSSCEEEEEEEEC-----SSEEEEECCSS--CCGGGGHHHHHHHHT-----TSEEEEECCTTSTTSCCCCTTCGGGG
T ss_pred EEEECCEEEEEEEECC-----CCeEEEECCCC--CCHHHHHHHHHHHhc-----CCEEEEecCCcccCCccccccccccc
Confidence 3445589999999996 78999999999 999999999999988 8999999999999998543 356
Q ss_pred CHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHH
Q 017180 145 NADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGL 224 (376)
Q Consensus 145 ~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (376)
+.+++++++.+++++++ .++++++||||||.+++.+|.++|+++.++|+++|......+......... ..+
T Consensus 80 ~~~~~a~~~~~~~~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~---~~~ 150 (293)
T d1ehya_ 80 SLDKAADDQAALLDALG------IEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVH---ESW 150 (293)
T ss_dssp CHHHHHHHHHHHHHHTT------CCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC--------------CCH
T ss_pred cchhhhhHHHhhhhhcC------ccccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhhhh---hhh
Confidence 78999999999999997 788999999999999999999999999999999985422211111100000 000
Q ss_pred HHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHH
Q 017180 225 LRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQ 304 (376)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (376)
........................+...+ ............+....+......+.........+........... ...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 228 (293)
T d1ehya_ 151 YSQFHQLDMAVEVVGSSREVCKKYFKHFF-DHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALW-TDL 228 (293)
T ss_dssp HHHHTTCHHHHHHHTSCHHHHHHHHHHHH-HHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCC-CTG
T ss_pred hhhhhccchhhhhhccchhHHHHHHHHhh-hhcccccccccHHHHHhhhhccccchhhhhhhhhhhhccccchhhh-hhh
Confidence 11111111111110000000012222222 2223334455666666665554443322222221111111000000 011
Q ss_pred HHhcccCCCcEEEEEeCCCCCCCHHHHH-HHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 305 LFADLEGKLPLLVVSTEGSPRRSKAEME-ALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 305 ~~~~i~~~~Pvlii~G~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
....+ ++|+++|+|++|.+++.+... .+.+..+++++++++++ |++++|+||++++.|.+|++
T Consensus 229 ~~~~~--~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ffr 293 (293)
T d1ehya_ 229 DHTMS--DLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAFR 293 (293)
T ss_dssp GGSCB--CSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred hhhcc--CCceEEEEeCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHHHHhhC
Confidence 12345 899999999999999876554 55677899999999998 99999999999999999973
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=1.2e-35 Score=256.54 Aligned_cols=265 Identities=14% Similarity=0.143 Sum_probs=176.7
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFV 153 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l 153 (376)
+++|+|++.|+ +|+|||+||++ .+...|..++..|.+. +|+|+++|+||||.|+.+...++.+++++|+
T Consensus 12 ~v~i~y~~~G~-----g~~illlHG~~--~~~~~~~~~~~~l~~~----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~di 80 (279)
T d1hkha_ 12 PIELYYEDQGS-----GQPVVLIHGYP--LDGHSWERQTRELLAQ----GYRVITYDRRGFGGSSKVNTGYDYDTFAADL 80 (279)
T ss_dssp EEEEEEEEESS-----SEEEEEECCTT--CCGGGGHHHHHHHHHT----TEEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred eEEEEEEEEcc-----CCeEEEECCCC--CCHHHHHHHHHHHHHC----CCEEEEEechhhCCccccccccchhhhhhhh
Confidence 67999999996 78999999999 9999999999888665 9999999999999999877889999999999
Q ss_pred HHHHhCCCCCCCCCCCcEEEEecchHH-HHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 154 VDLINAPDSPVSSSESDLVIFGGGHAA-TLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 154 ~~~l~~l~~~~~~~~~~~~lvG~S~Gg-~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
.+++++++ .++++|+|||||| .++..+|..+|++|.+++++++..............................
T Consensus 81 ~~~i~~l~------~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (279)
T d1hkha_ 81 HTVLETLD------LRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGD 154 (279)
T ss_dssp HHHHHHHT------CCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHC
T ss_pred hhhhhhcC------cCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhh
Confidence 99999997 6789999999996 5666677789999999999986431111110000000011111000000000
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCC
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGK 312 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 312 (376)
. ... + .......... .........++.................+........+ .....+.++.+ +
T Consensus 155 ~-~~~-~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~ 219 (279)
T d1hkha_ 155 R-FAW-F------TDFYKNFYNL-DENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIED----FRSDVEAVRAA--G 219 (279)
T ss_dssp H-HHH-H------HHHHHHHHTH-HHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCB----CHHHHHHHHHH--C
T ss_pred h-hhh-h------hhhhhhhccc-chhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhcc----cccchhhhccc--C
Confidence 0 000 0 0111100000 00011234444444444433333322222211111111 11233456677 8
Q ss_pred CcEEEEEeCCCCCCCHH-HHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 313 LPLLVVSTEGSPRRSKA-EMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 313 ~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+|+++|+|++|..++.+ ..+.+.+..|++++++++++ |++++|+|+++++.|.+||++
T Consensus 220 ~P~l~i~G~~D~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 220 KPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp CCEEEEEETTCSSSCTTTTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred CceEEEEcCCCCccCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 99999999999999864 56777888899999999998 999999999999999999975
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-36 Score=267.16 Aligned_cols=275 Identities=16% Similarity=0.153 Sum_probs=180.1
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADVME 150 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~~~ 150 (376)
+|++|+|.+.|+ +|+|||+||++ ++...|+.+++.|.++ ||+||++|+||||.|+.+. ..++.++++
T Consensus 20 ~g~~i~y~~~G~-----gp~vlllHG~~--~~~~~~~~~~~~L~~~----g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 88 (322)
T d1zd3a2 20 PRVRLHFVELGS-----GPAVCLCHGFP--ESWYSWRYQIPALAQA----GYRVLAMDMKGYGESSAPPEIEEYCMEVLC 88 (322)
T ss_dssp TTEEEEEEEECC-----SSEEEEECCTT--CCGGGGTTHHHHHHHT----TCEEEEEECTTSTTSCCCSCGGGGSHHHHH
T ss_pred CCCEEEEEEEcC-----CCeEEEECCCC--CCHHHHHHHHHHHHHC----CCEEEEeccccccccccccccccccccccc
Confidence 489999999995 78999999999 9999999999999886 8999999999999998654 467899999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
+++.+++++++ .++++++||||||.+++.+|.++|++++++|++++......+.....................
T Consensus 89 ~~i~~l~~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (322)
T d1zd3a2 89 KEMVTFLDKLG------LSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQ 162 (322)
T ss_dssp HHHHHHHHHHT------CSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHTCGGGHHHHHTT
T ss_pred hhhhhhhhccc------ccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhccchhhhHHhhh
Confidence 99999999997 789999999999999999999999999999999864322111100000000000000000111
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhc---------------cc-------CCCCCCChHHHHHHHHHHhccCCCchhHHH
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSH---------------VY-------SNPDNVTPGIVESRYALTKRKGARYVPAAF 288 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (376)
.+.......... ....+...+... .. .......++....+.......+.. ..
T Consensus 163 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 236 (322)
T d1zd3a2 163 EPGVAEAELEQN--LSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFR----GP 236 (322)
T ss_dssp STTHHHHHHHHT--HHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHTTH----HH
T ss_pred ccchhhhhhhhh--HHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhcccc----cc
Confidence 111111100000 011111110000 00 001112333333333332221111 11
Q ss_pred hhccCCCCCc-HHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHH
Q 017180 289 LTGLLDPVNS-REEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQ 366 (376)
Q Consensus 289 ~~~~~~~~~~-~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~ 366 (376)
.......... ........+++ ++||++|+|++|.+++++..+.+.+..+++++++++++ |++++|+|++|++.|.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~i--~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~ 314 (322)
T d1zd3a2 237 LNWYRNMERNWKWACKSLGRKI--LIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIK 314 (322)
T ss_dssp HHTTSCHHHHHHHHHTTTTCCC--CSCEEEEEETTCSSSCGGGGTTGGGTCTTCEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred cccccccccccccchhhhcccC--CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHH
Confidence 1111110000 00122234567 89999999999999999999999999999999999998 99999999999999999
Q ss_pred HHHhhc
Q 017180 367 FLQQTF 372 (376)
Q Consensus 367 fl~~~~ 372 (376)
||++..
T Consensus 315 FL~~~~ 320 (322)
T d1zd3a2 315 WLDSDA 320 (322)
T ss_dssp HHHHHT
T ss_pred HHhhcC
Confidence 999864
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=1.1e-35 Score=256.47 Aligned_cols=263 Identities=18% Similarity=0.234 Sum_probs=172.4
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
++++|+|++.|+ +|||||+||++ ++...|+.++..|.++ ||+|+++|+||||.|+.+...++.+++++|
T Consensus 11 ~~v~i~y~~~G~-----G~~ivllHG~~--~~~~~~~~~~~~l~~~----g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d 79 (277)
T d1brta_ 11 TSIDLYYEDHGT-----GQPVVLIHGFP--LSGHSWERQSAALLDA----GYRVITYDRRGFGQSSQPTTGYDYDTFAAD 79 (277)
T ss_dssp EEEEEEEEEECS-----SSEEEEECCTT--CCGGGGHHHHHHHHHT----TCEEEEECCTTSTTSCCCSSCCSHHHHHHH
T ss_pred CcEEEEEEEEcc-----CCeEEEECCCC--CCHHHHHHHHHHHHhC----CCEEEEEeCCCCCcccccccccchhhhhhh
Confidence 378999999996 78999999999 9999999999999876 899999999999999977778999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHH-HHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCC-chhhhhHHHHhhhc
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAA-TLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDS-SMETRYGLLRGTLR 230 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg-~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 230 (376)
+.+++++++ .++++++|||||| .++..+|..+|++|+++|++++.............. ..............
T Consensus 80 l~~~l~~l~------~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (277)
T d1brta_ 80 LNTVLETLD------LQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVK 153 (277)
T ss_dssp HHHHHHHHT------CCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHH
T ss_pred hhhhhhccC------cccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhh
Confidence 999999997 7889999999996 556667888999999999998743111111000000 00000000000000
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhccc
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLE 310 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 310 (376)
.. . .... ........... .........+..........................+ ..+.++++
T Consensus 154 ~~---~--~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~i- 216 (277)
T d1brta_ 154 AD---R--YAFY---TGFFNDFYNLD-ENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTD-------FRADIPRI- 216 (277)
T ss_dssp HC---H--HHHH---HHHHHHHTTHH-HHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCC-------CTTTGGGC-
T ss_pred cc---c--hhhh---hhccccccccc-hhhhhhhhHHHhhhhhcccchhhhhhhhhhhhhhhhh-------HHHHHHhc-
Confidence 00 0 0000 00111000000 0001123333333322222111111101101111111 23456778
Q ss_pred CCCcEEEEEeCCCCCCCHHH-HHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 311 GKLPLLVVSTEGSPRRSKAE-MEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 311 ~~~Pvlii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
++|+++|+|++|..++.+. .+.+.+..+++++++++++ |++++|+|+++++.|.+||++
T Consensus 217 -~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 217 -DVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp -CSCEEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred -CccceeEeecCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 9999999999999998765 4567778899999999998 999999999999999999975
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=2.8e-35 Score=253.48 Aligned_cols=264 Identities=13% Similarity=0.136 Sum_probs=176.1
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK 151 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 151 (376)
.||.+|+|+.+|+++ +|+|||+||++ .+...|..++..|.+. ||+|+++|+||||.|+.+...++.+++++
T Consensus 6 ~dG~~l~y~~~G~~~---~~~vv~lHG~~--~~~~~~~~~~~~l~~~----g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 76 (275)
T d1a88a_ 6 SDGTNIFYKDWGPRD---GLPVVFHHGWP--LSADDWDNQMLFFLSH----GYRVIAHDRRGHGRSDQPSTGHDMDTYAA 76 (275)
T ss_dssp TTSCEEEEEEESCTT---SCEEEEECCTT--CCGGGGHHHHHHHHHT----TCEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred cCCCEEEEEEecCCC---CCeEEEECCCC--CCHHHHHHHHHHHHhC----CCEEEEEeccccccccccccccccccccc
Confidence 359999999999765 78999999999 9999999999999776 99999999999999998778899999999
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecch-HHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGH-AATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~-Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
|+.+++++++ .++++++|||+ ||.+++.+|.++|++|+++|++++................. ......
T Consensus 77 ~~~~~l~~l~------~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~---~~~~~~-- 145 (275)
T d1a88a_ 77 DVAALTEALD------LRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPL---EVFDEF-- 145 (275)
T ss_dssp HHHHHHHHHT------CCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCH---HHHHHH--
T ss_pred cccccccccc------ccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhh---hhhhhh--
Confidence 9999999997 67889899886 66677778899999999999998642111111000000000 000000
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccC---CCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHh
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYS---NPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFA 307 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (376)
...+.. ................ ..........+......... ................ ..+.++
T Consensus 146 ----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~l~ 212 (275)
T d1a88a_ 146 ----RAALAA---NRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMG-AANAHYECIAAFSETD-----FTDDLK 212 (275)
T ss_dssp ----HHHHHH---CHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHS-CHHHHHHHHHHHHHCC-----CHHHHH
T ss_pred ----hhhhhh---hhHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhccc-chHHHHHHHHHhhhhh-----hhHHHH
Confidence 000000 0111111111111111 11122233333322221111 1111111111111111 345567
Q ss_pred cccCCCcEEEEEeCCCCCCCHH-HHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 308 DLEGKLPLLVVSTEGSPRRSKA-EMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 308 ~i~~~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
++ ++|+++|+|++|.+++.+ ..+.+.+..+++++++++++ |++++|+|+++++.|.+||+.
T Consensus 213 ~i--~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 275 (275)
T d1a88a_ 213 RI--DVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp HC--CSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred hh--ccccceeecCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 78 999999999999999865 45666777899999999998 999999999999999999973
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=6.5e-35 Score=251.19 Aligned_cols=260 Identities=12% Similarity=0.121 Sum_probs=173.4
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
||++|+|++.|+ ++||||+||++ .+...|..+++.|.++ ||+|+++|+||||.|+.+...++.+++++|
T Consensus 7 dG~~l~y~~~G~-----g~~ivlvHG~~--~~~~~~~~~~~~l~~~----g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d 75 (274)
T d1a8qa_ 7 DGVEIFYKDWGQ-----GRPVVFIHGWP--LNGDAWQDQLKAVVDA----GYRGIAHDRRGHGHSTPVWDGYDFDTFADD 75 (274)
T ss_dssp TSCEEEEEEECS-----SSEEEEECCTT--CCGGGGHHHHHHHHHT----TCEEEEECCTTSTTSCCCSSCCSHHHHHHH
T ss_pred CCCEEEEEEECC-----CCeEEEECCCC--CCHHHHHHHHHHHHHC----CCEEEEEeCCCCcccccccccccchhhHHH
Confidence 589999999996 77899999999 9999999999999876 899999999999999988788999999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH-hCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK-KNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~-~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
+.+++++++ .++++++||||||.+++.++. .+|++|++++++++.................. .......
T Consensus 76 l~~~l~~l~------~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~- 145 (274)
T d1a8qa_ 76 LNDLLTDLD------LRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDE---VFDALKN- 145 (274)
T ss_dssp HHHHHHHTT------CCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHH---HHHHHHH-
T ss_pred HHHHHHHhh------hhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHH---HHHHHHh-
Confidence 999999997 788999999999999988655 56899999999986431111110010000000 0000000
Q ss_pred CchhhHHhhhhhccHHHHHHHHHhcccCC---CCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 232 PGVGWMMYNMLVSNEKAIQSQYKSHVYSN---PDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
.... ........ .....+.. .........+.+...... ................. ..+.+++
T Consensus 146 -----~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~l~~ 210 (274)
T d1a8qa_ 146 -----GVLT---ERSQFWKD-TAEGFFSANRPGNKVTQGNKDAFWYMAMA-QTIEGGVRCVDAFGYTD-----FTEDLKK 210 (274)
T ss_dssp -----HHHH---HHHHHHHH-HHHHHTTTTSTTCCCCHHHHHHHHHHHTT-SCHHHHHHHHHHHHHCC-----CHHHHTT
T ss_pred -----hhhh---hhHHHhhh-hhhhhhhccccchhhhhhHHHHHHHhhhc-cchhhhhhHHHHhhccc-----hHHHHHh
Confidence 0000 00111111 11111111 112333333332222211 11111111111111111 3456788
Q ss_pred ccCCCcEEEEEeCCCCCCCHHH-HHHHhcccCCceEEEeCCC-CCCCC--CChHHHHHHHHHHHHh
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAE-MEALKGAKGVTKFVEVPGA-LLPQE--EYPAMVAQELYQFLQQ 370 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~-H~~~~--e~pe~~~~~i~~fl~~ 370 (376)
+ ++|+++|+|++|.+++.+. .+.+.+..+++++++++++ |++++ ++|++|++.|.+||++
T Consensus 211 i--~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 211 F--DIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp C--CSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred c--cceeeeeccCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 8 9999999999999998765 4566777899999999998 99876 5699999999999975
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=1.7e-35 Score=256.37 Aligned_cols=257 Identities=14% Similarity=0.139 Sum_probs=173.3
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHH---HHhhhCCcceEEEEeCCCCCcCCCCCC-CCCCHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQD---IVQRVGKVNWRATIVDWPGLGYSDRPK-MDYNADVM 149 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~---L~~~~~~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~ 149 (376)
+++|+|.+.|+ +|+|||+||++ .+...|..+... +.+. ||+|+++|+||||.|+.+. ..++...+
T Consensus 19 ~~~i~y~~~G~-----G~~ivllHG~~--~~~~~~~~~~~~l~~~~~~----g~~v~~~D~~G~G~S~~~~~~~~~~~~~ 87 (283)
T d2rhwa1 19 DFNIHYNEAGN-----GETVIMLHGGG--PGAGGWSNYYRNVGPFVDA----GYRVILKDSPGFNKSDAVVMDEQRGLVN 87 (283)
T ss_dssp EEEEEEEEECC-----SSEEEEECCCS--TTCCHHHHHTTTHHHHHHT----TCEEEEECCTTSTTSCCCCCSSCHHHHH
T ss_pred CEEEEEEEEcC-----CCeEEEECCCC--CChhHHHHHHHHHHHHHHC----CCEEEEEeCCCCcccccccccccccchh
Confidence 67899999996 78999999999 888887654332 3333 9999999999999998654 45677788
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhh
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTL 229 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (376)
++++.+++++++ .++++++||||||.+++.+|.++|++|+++|+++|....+... .. ...... .......
T Consensus 88 ~~~i~~li~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~--~~-~~~~~~-~~~~~~~ 157 (283)
T d2rhwa1 88 ARAVKGLMDALD------IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMF--AP-MPMEGI-KLLFKLY 157 (283)
T ss_dssp HHHHHHHHHHHT------CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSS--SC-SSCHHH-HHHHHHH
T ss_pred hhhccccccccc------ccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchh--hh-hhHHHH-HHHHHHh
Confidence 999999999997 7889999999999999999999999999999999854221110 00 000101 1111110
Q ss_pred ccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhcc-CCCch-hHHHhhccCCCCCcHHHHHHHHh
Q 017180 230 RAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRK-GARYV-PAAFLTGLLDPVNSREEFLQLFA 307 (376)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 307 (376)
.. ........... ..........++............ ..... ......... ...+..+.++
T Consensus 158 ~~------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~ 220 (283)
T d2rhwa1 158 AE------------PSYETLKQMLQ-VFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPL----STWDVTARLG 220 (283)
T ss_dssp HS------------CCHHHHHHHHH-HHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCG----GGGCCGGGGG
T ss_pred hh------------hhhhhHHHHHH-HhhcccccCcHHHHHHHHHHhhhhhhhhhhhhhhhhhhhc----cccchHHHHh
Confidence 00 00111111111 112222234444444333322211 00000 011111100 0111334567
Q ss_pred cccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 308 DLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 308 ~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
++ ++|+++|+|++|.+++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+||++
T Consensus 221 ~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 221 EI--KAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVIDFLRH 282 (283)
T ss_dssp GC--CSCEEEEEETTCSSSCTHHHHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred hC--CCCEEEEEeCCCCCcCHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHhC
Confidence 78 99999999999999999999999989999999999998 999999999999999999986
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=1.1e-35 Score=261.46 Aligned_cols=275 Identities=13% Similarity=0.082 Sum_probs=177.7
Q ss_pred ceEEeecCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC--CC
Q 017180 65 NWQWKFKENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP--KM 142 (376)
Q Consensus 65 ~~~~~~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~--~~ 142 (376)
+.....+.+|++++|.+.|+++. .|+|||+||++ +++..|..++..|.+. ||+|+++|+||||.|+.+ ..
T Consensus 24 ~~~~~~~~~g~~~~y~~~G~~~~--~p~llllHG~~--~~~~~~~~~~~~l~~~----~~~vi~~Dl~G~G~S~~~~~~~ 95 (310)
T d1b6ga_ 24 YLDDLPGYPGLRAHYLDEGNSDA--EDVFLCLHGEP--TWSYLYRKMIPVFAES----GARVIAPDFFGFGKSDKPVDEE 95 (310)
T ss_dssp EEESCTTCTTCEEEEEEEECTTC--SCEEEECCCTT--CCGGGGTTTHHHHHHT----TCEEEEECCTTSTTSCEESCGG
T ss_pred eeccccCCCCEEEEEEEecCCCC--CCEEEEECCCC--CchHHHHHHHHHhhcc----CceEEEeeecCccccccccccc
Confidence 33333455799999999998754 56788999999 9999999999999886 899999999999999954 35
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhh
Q 017180 143 DYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRY 222 (376)
Q Consensus 143 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~ 222 (376)
.++.+.+++++.+++++++ .++++|+||||||.+++.+|.++|++|+++|++++......... ....
T Consensus 96 ~~~~~~~~~~l~~~l~~l~------~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~-------~~~~ 162 (310)
T d1b6ga_ 96 DYTFEFHRNFLLALIERLD------LRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQ-------PAFS 162 (310)
T ss_dssp GCCHHHHHHHHHHHHHHHT------CCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTC-------THHH
T ss_pred cccccccccchhhhhhhcc------ccccccccceecccccccchhhhccccceEEEEcCccCCCcccc-------hhHH
Confidence 6899999999999999997 78999999999999999999999999999999987542111000 0000
Q ss_pred HHHHhhhccCchhhHH--hhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhc--cCCCC--
Q 017180 223 GLLRGTLRAPGVGWMM--YNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTG--LLDPV-- 296 (376)
Q Consensus 223 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-- 296 (376)
. ........... ................ ... ....++....+...............+... .....
T Consensus 163 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (310)
T d1b6ga_ 163 A----FVTQPADGFTAWKYDLVTPSDLRLDQFMK-RWA---PTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACI 234 (310)
T ss_dssp H----TTTSSTTTHHHHHHHHHSCSSCCHHHHHH-HHS---TTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHH
T ss_pred H----Hhhcchhhhhhhhhhhccchhhhhhhhhh-ccC---ccccHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhh
Confidence 0 00000000000 0000000000000000 000 012222222221111111111101111000 00000
Q ss_pred -CcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCc-eEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 297 -NSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVT-KFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 297 -~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
..........+++ ++|+++++|++|.+++.+..+.+.+..++. ++++++++ |++++|+|+.+++.|.+||+.
T Consensus 235 ~~~~~~~~~~~~~~--~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 235 DISTEAISFWQNDW--NGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAET 309 (310)
T ss_dssp HHHHHHHHHHHHTC--CSEEEEEEETTCSSSSHHHHHHHHHHSTTCCCCEEETTCCSCGGGGHHHHHHHHHHHHHHT
T ss_pred hhhhhhhHHhhccc--CCCeEEEEeCCCCCCCHHHHHHHHHhcCCCccEEEECCCcCchhhhCHHHHHHHHHHHHhC
Confidence 0111123344567 899999999999999999999998877764 78889999 999999999999999999975
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=1.1e-34 Score=249.02 Aligned_cols=261 Identities=13% Similarity=0.136 Sum_probs=173.6
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK 151 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 151 (376)
.||++|+|+..|+ +|||||+||++ ++...|+.+++.|.++ ||+|+++|+||||.|+.+...++.+++++
T Consensus 6 ~dG~~l~y~~~G~-----g~~vv~lHG~~--~~~~~~~~~~~~l~~~----g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 74 (271)
T d1va4a_ 6 KDGTQIYFKDWGS-----GKPVLFSHGWL--LDADMWEYQMEYLSSR----GYRTIAFDRRGFGRSDQPWTGNDYDTFAD 74 (271)
T ss_dssp TTSCEEEEEEESS-----SSEEEEECCTT--CCGGGGHHHHHHHHTT----TCEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred ECCeEEEEEEEcC-----CCeEEEECCCC--CCHHHHHHHHHHHHhC----CCEEEEEeccccccccccccccccccccc
Confidence 4699999999997 77899999999 9999999999999876 89999999999999998878899999999
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHH-HHHHhCCCCcceEEEeccCCCCCCCcccCCCC-chhhhhHHHHhhh
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTV-RAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDS-SMETRYGLLRGTL 229 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~-~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 229 (376)
++.+++++++ .++++++|||+||.+++ .+|..+|+++.+++++++.............. .......+....
T Consensus 75 ~~~~~~~~~~------~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 147 (271)
T d1va4a_ 75 DIAQLIEHLD------LKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTEL- 147 (271)
T ss_dssp HHHHHHHHHT------CCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHH-
T ss_pred cceeeeeecC------CCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHHHHHHHHh-
Confidence 9999999997 77899999999887665 45668899999999998743111100000000 000000000000
Q ss_pred ccCchhhHHhhhhhccHHHHHHHHHhcccCC-CCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 230 RAPGVGWMMYNMLVSNEKAIQSQYKSHVYSN-PDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
... ....+..+........ ................. .................. ..+.+++
T Consensus 148 ---------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~l~~ 209 (271)
T d1va4a_ 148 ---------LKD---RAQFISDFNAPFYGINKGQVVSQGVQTQTLQIAL-LASLKATVDCVTAFAETD-----FRPDMAK 209 (271)
T ss_dssp ---------HHH---HHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHH-HSCHHHHHHHHHHHHHCC-----CHHHHHH
T ss_pred ---------hhh---hhhhhhhhcchhhcccchhhhhhhHHHHHHhhhh-hhhhhhhhhcccccchhh-----hhhhhhh
Confidence 000 0111111111111111 11222222222222211 111111111111111111 3456778
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHH-hcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHh
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEAL-KGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~-~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~ 370 (376)
+ ++|+++|+|++|.+++.+...++ .+..+++++++++++ |++++|+|+++++.|.+||++
T Consensus 210 i--~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 210 I--DVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp C--CSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred c--ccceeecccCCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 8 99999999999999998776665 466789999999998 999999999999999999975
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=2.4e-34 Score=247.36 Aligned_cols=261 Identities=13% Similarity=0.167 Sum_probs=174.5
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEK 151 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 151 (376)
.||++|+|+..|+ +|||||+||++ ++...|..++..|.++ ||+|+++|+||||.|+.+...++.+++++
T Consensus 6 ~dG~~i~y~~~G~-----g~pvvllHG~~--~~~~~~~~~~~~l~~~----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 74 (273)
T d1a8sa_ 6 RDGTQIYYKDWGS-----GQPIVFSHGWP--LNADSWESQMIFLAAQ----GYRVIAHDRRGHGRSSQPWSGNDMDTYAD 74 (273)
T ss_dssp TTSCEEEEEEESC-----SSEEEEECCTT--CCGGGGHHHHHHHHHT----TCEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred eCCcEEEEEEECC-----CCeEEEECCCC--CCHHHHHHHHHHHHhC----CCEEEEEechhcCccccccccccccchHH
Confidence 3699999999996 78899999999 9999999999999775 89999999999999998878899999999
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHH-HHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVR-AAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~-~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
++.+++++++ .++.+++|||+||.+++. +|..+|++|.+++++++................ ........
T Consensus 75 ~~~~~l~~l~------~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~- 144 (273)
T d1a8sa_ 75 DLAQLIEHLD------LRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLP---MEVFDGIR- 144 (273)
T ss_dssp HHHHHHHHTT------CCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBC---HHHHHHHH-
T ss_pred HHHHHHHhcC------ccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccch---hhhhhhHH-
Confidence 9999999997 678899999998866555 555789999999999864211111000000000 00000000
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCC---CCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHh
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSN---PDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFA 307 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (376)
...........+.......+.. .........+.+............. .......... ..+.++
T Consensus 145 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~ 210 (273)
T d1a8sa_ 145 --------QASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAY-DCIKAFSETD-----FTEDLK 210 (273)
T ss_dssp --------HHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHH-HHHHHHHHCC-----CHHHHH
T ss_pred --------HHHHHHHHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcccchhhhh-hhHHHhhhhh-----hhHHHH
Confidence 0000001122222222211111 1123333333333322222211111 1111111111 345678
Q ss_pred cccCCCcEEEEEeCCCCCCCHHHHHHHh-cccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHH
Q 017180 308 DLEGKLPLLVVSTEGSPRRSKAEMEALK-GAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 308 ~i~~~~Pvlii~G~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~ 369 (376)
++ ++|+++|+|++|.+++.+..+.+. +..+++++++++++ |++++|+|+++++.|.+||+
T Consensus 211 ~i--~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 211 KI--DVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp TC--CSCEEEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred hh--ccceEEEecCCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHcC
Confidence 88 999999999999999887766664 45689999999998 99999999999999999996
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=6.7e-36 Score=259.03 Aligned_cols=267 Identities=13% Similarity=0.131 Sum_probs=173.0
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVME 150 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~ 150 (376)
.+|.+|+|+..|++.. +|+|||+||++ ++...|...+..+.+. ||+|+++|+||||.|+.+ ...++.+.++
T Consensus 9 ~~g~~i~y~~~g~~~~--~~~iv~lHG~~--g~~~~~~~~~~~~~~~----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 80 (290)
T d1mtza_ 9 VNGIYIYYKLCKAPEE--KAKLMTMHGGP--GMSHDYLLSLRDMTKE----GITVLFYDQFGCGRSEEPDQSKFTIDYGV 80 (290)
T ss_dssp ETTEEEEEEEECCSSC--SEEEEEECCTT--TCCSGGGGGGGGGGGG----TEEEEEECCTTSTTSCCCCGGGCSHHHHH
T ss_pred ECCEEEEEEEcCCCCC--CCeEEEECCCC--CchHHHHHHHHHHHHC----CCEEEEEeCCCCccccccccccccccchh
Confidence 3599999999997653 67899999998 7777777777777665 899999999999999955 3578999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
+|+.++++++. ..+++++|||||||.+++.+|.++|++|+++|++++.... ............
T Consensus 81 ~~l~~ll~~l~-----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~------------~~~~~~~~~~~~ 143 (290)
T d1mtza_ 81 EEAEALRSKLF-----GNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSV------------PLTVKEMNRLID 143 (290)
T ss_dssp HHHHHHHHHHH-----TTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBH------------HHHHHHHHHHHH
T ss_pred hhhhhhhcccc-----cccccceecccccchhhhhhhhcChhhheeeeecccccCc------------ccchhhhhhhhh
Confidence 99999999873 2678999999999999999999999999999999874210 000000000100
Q ss_pred c-Cch-----hhHHhhhhhcc---HHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHh--hcc-CCCCCc
Q 017180 231 A-PGV-----GWMMYNMLVSN---EKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFL--TGL-LDPVNS 298 (376)
Q Consensus 231 ~-~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~ 298 (376)
. ... ........... ............. ......++............ ...... ... ......
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 218 (290)
T d1mtza_ 144 ELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLL-RSEDWPPEVLKSLEYAERRN----VYRIMNGPNEFTITGTIK 218 (290)
T ss_dssp TSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTS-CSSCCCHHHHHHHHHHHHSS----HHHHHTCSBTTBCCSTTT
T ss_pred hhhHHHHHHHHHhhhhccccchhHHHHHHHHhhhhhc-ccccchHHHHHHHHHHhhhh----hhhhhcchhHHhHhhhhh
Confidence 0 000 00000000000 0111111111111 12233333333222111110 000000 000 000000
Q ss_pred HHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 299 REEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 299 ~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
..++...++++ ++|+++|+|++|.+++ +..+.+.+..+++++++++++ |++++|+|+++++.|.+||.+.
T Consensus 219 ~~~~~~~~~~i--~~P~l~i~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~h 289 (290)
T d1mtza_ 219 DWDITDKISAI--KIPTLITVGEYDEVTP-NVARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLSDFILKH 289 (290)
T ss_dssp TCBCTTTGGGC--CSCEEEEEETTCSSCH-HHHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred cccHHHHhhcc--cceEEEEEeCCCCCCH-HHHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHHHh
Confidence 11133456777 9999999999998765 567788888999999999998 9999999999999999999985
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=9.8e-35 Score=247.93 Aligned_cols=251 Identities=12% Similarity=0.086 Sum_probs=160.5
Q ss_pred eEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHH
Q 017180 76 NIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVD 155 (376)
Q Consensus 76 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~ 155 (376)
+|+|+..|++ +++|||+||++ .+...|+.+++.|.+ +|+|+++|+||||.|+.+. ..+.+++ .+
T Consensus 1 ~i~y~~~G~g----~~~lvllHG~~--~~~~~~~~~~~~L~~-----~~~vi~~D~~G~G~S~~~~-~~~~~d~----~~ 64 (256)
T d1m33a_ 1 NIWWQTKGQG----NVHLVLLHGWG--LNAEVWRCIDEELSS-----HFTLHLVDLPGFGRSRGFG-ALSLADM----AE 64 (256)
T ss_dssp CCCEEEECCC----SSEEEEECCTT--CCGGGGGGTHHHHHT-----TSEEEEECCTTSTTCCSCC-CCCHHHH----HH
T ss_pred CeEEEEECCC----CCeEEEECCCC--CCHHHHHHHHHHHhC-----CCEEEEEeCCCCCCccccc-ccccccc----cc
Confidence 3689999975 57899999999 999999999999987 8999999999999998543 3444433 33
Q ss_pred HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchh
Q 017180 156 LINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVG 235 (376)
Q Consensus 156 ~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (376)
.+..+. .++++++||||||.+++.+|.++|+++++++++++........ ............. .
T Consensus 65 ~~~~~~------~~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~---------~ 127 (256)
T d1m33a_ 65 AVLQQA------PDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARD--EWPGIKPDVLAGF---------Q 127 (256)
T ss_dssp HHHTTS------CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBT--TBCSBCHHHHHHH---------H
T ss_pred cccccc------ccceeeeecccchHHHHHHHHhCCcccceeeeeecccccccch--hhhhhHHHHHHHH---------H
Confidence 333443 6789999999999999999999999999999998643111100 0000000000000 0
Q ss_pred hHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCC--chhHHHhhccCCCCCcHHHHHHHHhcccCCC
Q 017180 236 WMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGAR--YVPAAFLTGLLDPVNSREEFLQLFADLEGKL 313 (376)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 313 (376)
..+... ....+..+....... ..................... .............. ..+.++++ ++
T Consensus 128 ~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~i--~~ 195 (256)
T d1m33a_ 128 QQLSDD---QQRTVERFLALQTMG--TETARQDARALKKTVLALPMPEVDVLNGGLEILKTVD-----LRQPLQNV--SM 195 (256)
T ss_dssp HHHHHH---HHHHHHHHHHTTSTT--STTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCC-----CTTGGGGC--CS
T ss_pred hhhhhh---hHHHHHHHhhhhhcc--ccchhhHHHHHHHhhhhcchhhHHHHHhhhhhhcccc-----hHHHHHhc--cC
Confidence 000000 011122122211111 111112222222222111111 11111111111111 23456778 99
Q ss_pred cEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 314 PLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 314 Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
|+++|+|++|.++|.+..+.+.+..|++++++++++ |++++|+|+++++.|.+||+++
T Consensus 196 P~lii~G~~D~~~p~~~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~i 254 (256)
T d1m33a_ 196 PFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQRV 254 (256)
T ss_dssp CEEEEEETTCSSSCGGGCC-CTTTCTTCEEEEETTCCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred CccccccccCCCCCHHHHHHHHHHCCCCEEEEECCCCCchHHHCHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999998 9999999999999999999875
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-34 Score=237.10 Aligned_cols=190 Identities=17% Similarity=0.235 Sum_probs=156.4
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHH--HHHHHHhhhCCcceEEEEeCCCCCcCCCCCC--CCCCHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRL--VAQDIVQRVGKVNWRATIVDWPGLGYSDRPK--MDYNADV 148 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~--~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~--~~~~~~~ 148 (376)
+|.+++|+..++.+...+++|||+||++ .+...|+. ++..|++. ||+|+++|+||||.|+.+. ..++...
T Consensus 14 ~G~~i~y~~~~~~~~~~~~~vvllHG~~--~~~~~w~~~~~~~~la~~----gy~via~D~~G~G~S~~~~~~~~~~~~~ 87 (208)
T d1imja_ 14 QGQALFFREALPGSGQARFSVLLLHGIR--FSSETWQNLGTLHRLAQA----GYRAVAIDLPGLGHSKEAAAPAPIGELA 87 (208)
T ss_dssp TTEEECEEEEECSSSCCSCEEEECCCTT--CCHHHHHHHTHHHHHHHT----TCEEEEECCTTSGGGTTSCCSSCTTSCC
T ss_pred CCEEEEEEEecCCCCCCCCeEEEECCCC--CChhHHhhhHHHHHHHHc----CCeEEEeecccccCCCCCCcccccchhh
Confidence 3999999998875544478999999999 99999976 46888886 8999999999999998553 3455566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
.++++.++++.++ .++++|+||||||.+++.+|.++|++++++|+++|...
T Consensus 88 ~~~~l~~~~~~l~------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~----------------------- 138 (208)
T d1imja_ 88 PGSFLAAVVDALE------LGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICT----------------------- 138 (208)
T ss_dssp CTHHHHHHHHHHT------CCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCG-----------------------
T ss_pred hhhhhhhcccccc------cccccccccCcHHHHHHHHHHHhhhhcceeeecCcccc-----------------------
Confidence 7788889999987 78899999999999999999999999999999988310
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
... ..+.+.+
T Consensus 139 -----------~~~-----------------------------------------------------------~~~~~~~ 148 (208)
T d1imja_ 139 -----------DKI-----------------------------------------------------------NAANYAS 148 (208)
T ss_dssp -----------GGS-----------------------------------------------------------CHHHHHT
T ss_pred -----------ccc-----------------------------------------------------------ccccccc
Confidence 000 0112445
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
+ ++|+|+|+|++|.+++... ...+..+++++++++++ |.+++|+|++|.+.|.+||+++
T Consensus 149 i--~~P~Lii~G~~D~~~~~~~--~~~~~~~~~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl~~L 208 (208)
T d1imja_ 149 V--KTPALIVYGDQDPMGQTSF--EHLKQLPNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 208 (208)
T ss_dssp C--CSCEEEEEETTCHHHHHHH--HHHTTSSSEEEEEETTCCTTHHHHCHHHHHHHHHHHHHTC
T ss_pred c--ccccccccCCcCcCCcHHH--HHHHhCCCCeEEEECCCCCchhhhCHHHHHHHHHHHHhcC
Confidence 6 8999999999999877543 33456889999999999 9999999999999999999863
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=8.4e-34 Score=249.74 Aligned_cols=116 Identities=16% Similarity=0.155 Sum_probs=103.3
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC--CCCCCHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP--KMDYNADVM 149 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~--~~~~~~~~~ 149 (376)
+||.+|+|++.|+++ ++||||+||++ ++...|......+.+ +|+||++|+||||.|+++ ...++.+++
T Consensus 19 ~dg~~i~y~~~G~~~---g~pvvllHG~~--g~~~~~~~~~~~l~~-----~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~ 88 (313)
T d1azwa_ 19 DDRHTLYFEQCGNPH---GKPVVMLHGGP--GGGCNDKMRRFHDPA-----KYRIVLFDQRGSGRSTPHADLVDNTTWDL 88 (313)
T ss_dssp SSSCEEEEEEEECTT---SEEEEEECSTT--TTCCCGGGGGGSCTT-----TEEEEEECCTTSTTSBSTTCCTTCCHHHH
T ss_pred CCCcEEEEEEecCCC---CCEEEEECCCC--CCccchHHHhHHhhc-----CCEEEEEeccccCCCCccccccchhHHHH
Confidence 358899999999766 88999999999 777888776666655 899999999999999854 356899999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
++|+.+++++++ .++++|+||||||.+++.+|.++|++|++++++++.
T Consensus 89 ~~dl~~~~~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~ 136 (313)
T d1azwa_ 89 VADIERLRTHLG------VDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp HHHHHHHHHHTT------CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred HHHHHHHHHhhc------cccceeEEecCCcHHHHHHHHHhhhceeeeeEeccc
Confidence 999999999997 788999999999999999999999999999999874
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=100.00 E-value=5e-32 Score=234.99 Aligned_cols=269 Identities=13% Similarity=0.140 Sum_probs=165.5
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC----CCCHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM----DYNADV 148 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~----~~~~~~ 148 (376)
+|.+|+|.+.|+ +|+|||+||++ ++...|+.+++.|++ +|+||++|+||||.|+.+.. ......
T Consensus 16 ~g~~i~y~~~G~-----g~~vvllHG~~--~~~~~~~~~~~~L~~-----~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~ 83 (298)
T d1mj5a_ 16 KGRRMAYIDEGT-----GDPILFQHGNP--TSSYLWRNIMPHCAG-----LGRLIACDLIGMGDSDKLDPSGPERYAYAE 83 (298)
T ss_dssp TTEEEEEEEESC-----SSEEEEECCTT--CCGGGGTTTGGGGTT-----SSEEEEECCTTSTTSCCCSSCSTTSSCHHH
T ss_pred CCEEEEEEEEcC-----CCcEEEECCCC--CCHHHHHHHHHHHhc-----CCEEEEEeCCCCCCCCCCccccccccccch
Confidence 399999999996 78999999999 999999999999988 79999999999999985532 344555
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
..+++..++.... ..+++++|||||||.+++.+|.++|++|.+++++++......... . . ........ .
T Consensus 84 ~~~~~~~~~~~~~-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~--~-~--~~~~~~~~-~ 152 (298)
T d1mj5a_ 84 HRDYLDALWEALD-----LGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWAD--F-P--EQDRDLFQ-A 152 (298)
T ss_dssp HHHHHHHHHHHTT-----CTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGG--S-C--GGGHHHHH-H
T ss_pred hhhhhcccccccc-----ccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchh--h-h--hhhhhhhh-h
Confidence 5666665554443 367899999999999999999999999999999987432111100 0 0 00000000 0
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchh-HHHhhcc-CCCCC-----cHHH
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVP-AAFLTGL-LDPVN-----SREE 301 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-----~~~~ 301 (376)
............ .......... ... ......................... ....... ..... ....
T Consensus 153 ~~~~~~~~~~~~----~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (298)
T d1mj5a_ 153 FRSQAGEELVLQ----DNVFVEQVLP-GLI--LRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARD 225 (298)
T ss_dssp HHSTTHHHHHTT----TCHHHHTHHH-HTS--SSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHH
T ss_pred hhhhhhhhhhhh----hhhhhhhhcc-ccc--cccchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhhhhhhhh
Confidence 000000000000 0001110111 111 0112222222221111111100000 0000000 00000 1122
Q ss_pred HHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhhcCC
Q 017180 302 FLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTFEP 374 (376)
Q Consensus 302 ~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~~~~ 374 (376)
....+..+ ++|+++++|++|.+.+ ...+.+.+..++.+++++++||++++|+|+++++.|.+||+++..+
T Consensus 226 ~~~~~~~~--~~P~l~i~g~~d~~~~-~~~~~~~~~~p~~~~~~~~~GH~~~~e~P~~v~~~i~~fl~~~~~a 295 (298)
T d1mj5a_ 226 YAGWLSES--PIPKLFINAEPGALTT-GRMRDFCRTWPNQTEITVAGAHFIQEDSPDEIGAAIAAFVRRLRPA 295 (298)
T ss_dssp HHHHHTTC--CSCEEEEEEEECSSSS-HHHHHHHTTCSSEEEEEEEESSCGGGTCHHHHHHHHHHHHHHHSCC
T ss_pred hhhhhhhc--ceeEEEEecCCCCcCh-HHHHHHHHHCCCCEEEEeCCCCchHHhCHHHHHHHHHHHHhhhccc
Confidence 34556777 9999999999998776 4567778888998888776569999999999999999999998544
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=8.2e-33 Score=234.51 Aligned_cols=245 Identities=11% Similarity=0.019 Sum_probs=161.6
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
|++|||+||++ ++...|+.+++.|.++ ||+|+++|+||||.|+.+ ...++.+++++++..+++... ..
T Consensus 2 G~~vvllHG~~--~~~~~w~~~~~~L~~~----g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 70 (258)
T d1xkla_ 2 GKHFVLVHGAC--HGGWSWYKLKPLLEAA----GHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLS-----AD 70 (258)
T ss_dssp CCEEEEECCTT--CCGGGGTTHHHHHHHT----TCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSC-----SS
T ss_pred CCcEEEECCCC--CCHHHHHHHHHHHHhC----CCEEEEecCCCCCCCCCCCCCCcchHHHHHHHhhhhhccc-----cc
Confidence 78999999999 9999999999999986 899999999999999855 456899999999999998876 46
Q ss_pred CcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhh---------HHh
Q 017180 169 SDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGW---------MMY 239 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 239 (376)
.+++++||||||.+++.++.++|+++.++|++++........ . ................... ...
T Consensus 71 ~~~~lvghS~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (258)
T d1xkla_ 71 EKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHN----S--SFVLEQYNERTPAENWLDTQFLPYGSPEEPL 144 (258)
T ss_dssp SCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSC----T--THHHHHHHHTSCTTTTTTCEEEECSCTTSCC
T ss_pred ccccccccchhHHHHHHHhhhhccccceEEEecccCCCcccc----h--HHHHHHHhhhhhhhhhhhhhhhhhhhhhhhc
Confidence 789999999999999999999999999999998753221110 0 0000001000000000000 000
Q ss_pred hhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEE
Q 017180 240 NMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVS 319 (376)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~ 319 (376)
............ .... ....+..... ...... ............ ....+..+ ++|+++|+
T Consensus 145 ~~~~~~~~~~~~----~~~~---~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~--------~~~~~~~~--~~P~l~i~ 204 (258)
T d1xkla_ 145 TSMFFGPKFLAH----KLYQ---LCSPEDLALA-SSLVRP--SSLFMEDLSKAK--------YFTDERFG--SVKRVYIV 204 (258)
T ss_dssp EEEECCHHHHHH----HTST---TSCHHHHHHH-HHHCCC--BCCCHHHHHHCC--------CCCTTTGG--GSCEEEEE
T ss_pred ccccccHHHHHH----Hhhh---cccHHHHHHh-hhhhhh--hhhhhhhhhhhh--------hccccccc--ccceeEee
Confidence 000000111110 0000 0111111111 100100 000111110000 01123445 89999999
Q ss_pred eCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 320 TEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 320 G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
|++|..++.+..+.+.+..+++++++++++ |++++|+|+++++.|.+|+++.
T Consensus 205 g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 205 CTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAMLCEPQKLCASLLEIAHKY 257 (258)
T ss_dssp ETTCTTTTHHHHHHHHHHHCCSEEEEETTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred ecCCCCCCHHHHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999998 9999999999999999999874
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.98 E-value=1.6e-32 Score=232.98 Aligned_cols=242 Identities=12% Similarity=-0.000 Sum_probs=159.0
Q ss_pred cEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHHHHHHHHHhCCCCCCCCCCCc
Q 017180 92 NILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKFVVDLINAPDSPVSSSESD 170 (376)
Q Consensus 92 ~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~ 170 (376)
-.|||||++ .+...|+.+++.|.++ ||+|+++|+||||.|+.+ ...++.+++++++.++++++. ..++
T Consensus 4 ~~vliHG~~--~~~~~w~~~~~~L~~~----g~~Via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~ 72 (256)
T d3c70a1 4 HFVLIHTIC--HGAWIWHKLKPLLEAL----GHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALP-----PGEK 72 (256)
T ss_dssp EEEEECCTT--CCGGGGTTHHHHHHHT----TCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHHSC-----TTCC
T ss_pred cEEEeCCCC--CCHHHHHHHHHHHHhC----CCEEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhhhhc-----cccc
Confidence 368999999 9999999999999986 899999999999999955 457899999999999988865 4788
Q ss_pred EEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhh--------HHhhhh
Q 017180 171 LVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGW--------MMYNML 242 (376)
Q Consensus 171 ~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 242 (376)
++|+||||||.+++.++.++|++|+++|++++...... .... .................. ......
T Consensus 73 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (256)
T d3c70a1 73 VILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTE----HCPS--YVVDKLMEVFPDWKDTTYFTYTKDGKEITGLK 146 (256)
T ss_dssp EEEEEETTHHHHHHHHHHHHGGGEEEEEEESCCCCCSS----SCTT--HHHHHHHHHSCCCTTCEEEEEEETTEEEEEEE
T ss_pred eeecccchHHHHHHHHhhcCchhhhhhheeccccCCcc----cchh--hHhhhhhhhhhhhhhhHHHhhhccccccchhh
Confidence 99999999999999999999999999999987431111 0000 000000000000000000 000000
Q ss_pred hccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCC
Q 017180 243 VSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEG 322 (376)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~ 322 (376)
......+. ..+. ................ ............. ......+ ++|+++|+|++
T Consensus 147 -~~~~~~~~----~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~--~~P~l~i~G~~ 205 (256)
T d3c70a1 147 -LGFTLLRE----NLYT----LCGPEEYELAKMLTRK--GSLFQNILAKRPF--------FTKEGYG--SIKKIYVWTDQ 205 (256)
T ss_dssp -CCHHHHHH----HTST----TSCHHHHHHHHHHCCC--BCCCHHHHTTSCC--------CCTTTGG--GSCEEEEECTT
T ss_pred -hhhhhhhh----hhhh----hcchhhHHHhhhhhhh--hhHHHhhhhhcch--------hhhhhcc--ccceeEEeecC
Confidence 00111111 1110 0111111111111111 1111111111100 0112334 78999999999
Q ss_pred CCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhh
Q 017180 323 SPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 323 D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
|..++.+..+.+.+..|++++++++++ |++++|+|+++++.|.+|+++.
T Consensus 206 D~~~~~~~~~~~~~~~p~~~~~~i~~agH~~~~e~P~~~~~~l~~~~~~~ 255 (256)
T d3c70a1 206 DEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTKTKEIAEILQEVADTY 255 (256)
T ss_dssp CSSSCHHHHHHHHHHSCCSEEEECCSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998 9999999999999999999864
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.97 E-value=2.1e-30 Score=220.24 Aligned_cols=258 Identities=13% Similarity=0.140 Sum_probs=151.0
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC-CCCHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM-DYNADVMEKF 152 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~-~~~~~~~~~~ 152 (376)
+.+|||...+.. +|+|||+||++ ++...|..+++.|++. ||+|+++|+||||.|+.+.. .........+
T Consensus 4 ~~~lh~~~~~~~----~P~ivllHG~~--~~~~~~~~~~~~L~~~----g~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~ 73 (264)
T d1r3da_ 4 SNQLHFAKPTAR----TPLVVLVHGLL--GSGADWQPVLSHLART----QCAALTLDLPGHGTNPERHCDNFAEAVEMIE 73 (264)
T ss_dssp CEEEESSCCBTT----BCEEEEECCTT--CCGGGGHHHHHHHTTS----SCEEEEECCTTCSSCC-------CHHHHHHH
T ss_pred CCeEEEcCCCCC----CCeEEEeCCCC--CCHHHHHHHHHHHHhC----CCEEEEEecccccccccccccccchhhhhhh
Confidence 447888776653 67899999999 9999999999999875 89999999999999985543 3333333333
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
...+..... .++++++||||||.+++.+|.++|+.+.+++++.+........ ...... .... ...
T Consensus 74 ~~~~~~~~~------~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~---~~~ 138 (264)
T d1r3da_ 74 QTVQAHVTS------EVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQ-----ENEEKA-ARWQ---HDQ 138 (264)
T ss_dssp HHHHTTCCT------TSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCC-----SHHHHH-HHHH---HHH
T ss_pred hcccccccc------cCceeeeeecchHHHHHHHHHhCchhccccccccccCCCcccc-----chhhhh-hhhh---hhh
Confidence 334444443 6789999999999999999999999999998876532211110 000000 0000 000
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCC
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGK 312 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 312 (376)
......... ................ ....+............ ............... ......+.+..+ +
T Consensus 139 ~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~l~~~--~ 208 (264)
T d1r3da_ 139 QWAQRFSQQ--PIEHVLSDWYQQAVFS---SLNHEQRQTLIAQRSAN-LGSSVAHMLLATSLA--KQPYLLPALQAL--K 208 (264)
T ss_dssp HHHHHHHHS--CHHHHHHHHTTSGGGT---TCCHHHHHHHHHHHTTS-CHHHHHHHHHHTCGG--GCCCCHHHHHTC--S
T ss_pred hhhhhhhhh--hhhhhhhhhhhhhhhc---ccchHHHHHHHHHHhhh-hhhhhHHhhhhcccc--ccccchhhhhcc--C
Confidence 000000000 0011111111111111 22223222222222111 111111111100000 000134567778 9
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 313 LPLLVVSTEGSPRRSKAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 313 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
+|+++|+|++|..+ ..+.+ .+++++++++++ |++++|+|+++++.|.+||+++.
T Consensus 209 ~p~l~i~G~~D~~~-----~~~~~-~~~~~~~~i~~~gH~~~~e~P~~~~~~i~~fl~~l~ 263 (264)
T d1r3da_ 209 LPIHYVCGEQDSKF-----QQLAE-SSGLSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp SCEEEEEETTCHHH-----HHHHH-HHCSEEEEETTCCSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred cceEEEEeCCcHHH-----HHHHh-cCCCeEEEECCCCCchHHHCHHHHHHHHHHHHHhcc
Confidence 99999999999532 22322 367899999999 99999999999999999999875
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.97 E-value=5e-31 Score=230.07 Aligned_cols=116 Identities=14% Similarity=0.097 Sum_probs=105.6
Q ss_pred CCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC--CCCCCHHHH
Q 017180 72 ENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP--KMDYNADVM 149 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~--~~~~~~~~~ 149 (376)
+||.+|+|++.|+++ +||||||||++ ++...|..+...|++ +|+||++|+||||.|+++ ...++...+
T Consensus 19 ~dG~~i~y~~~G~~~---g~pvvllHG~~--~~~~~w~~~~~~l~~-----~~~vi~~D~rG~G~S~~~~~~~~~~~~~~ 88 (313)
T d1wm1a_ 19 GDGHRIYWELSGNPN---GKPAVFIHGGP--GGGISPHHRQLFDPE-----RYKVLLFDQRGCGRSRPHASLDNNTTWHL 88 (313)
T ss_dssp SSSCEEEEEEEECTT---SEEEEEECCTT--TCCCCGGGGGGSCTT-----TEEEEEECCTTSTTCBSTTCCTTCSHHHH
T ss_pred CCCcEEEEEEecCCC---CCeEEEECCCC--CcccchHHHHHHhhc-----CCEEEEEeCCCcccccccccccccchhhH
Confidence 369999999999866 78999999999 999999999888877 899999999999999844 357889999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 150 EKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 150 ~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.+|+..++++++ ..+++++|||+||.+++.+|..+|++|.+++++++.
T Consensus 89 ~~d~~~~~~~~~------~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~ 136 (313)
T d1wm1a_ 89 VADIERLREMAG------VEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIF 136 (313)
T ss_dssp HHHHHHHHHHTT------CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred HHHHHhhhhccC------CCcceeEeeecCCchhhHHHHHHhhhheeeeecccc
Confidence 999999999997 789999999999999999999999999999999864
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.96 E-value=3.4e-29 Score=226.98 Aligned_cols=282 Identities=12% Similarity=0.046 Sum_probs=167.9
Q ss_pred cCCceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcc------eEEEEeCCCCCcCCCCCC--C
Q 017180 71 KENSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVN------WRATIVDWPGLGYSDRPK--M 142 (376)
Q Consensus 71 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~------~~Vi~~D~~G~G~S~~~~--~ 142 (376)
..+|++|||.....+.++ ++||||+||++ ++...|+.+++.|++. | |+||++|+||||.|++|. .
T Consensus 88 ~i~G~~iHf~h~~~~~~~-~~pLlLlHG~P--~s~~~w~~vi~~La~~----g~~~~~~f~VIaPDLpG~G~S~~P~~~~ 160 (394)
T d1qo7a_ 88 EIEGLTIHFAALFSERED-AVPIALLHGWP--GSFVEFYPILQLFREE----YTPETLPFHLVVPSLPGYTFSSGPPLDK 160 (394)
T ss_dssp EETTEEEEEEEECCSCTT-CEEEEEECCSS--CCGGGGHHHHHHHHHH----CCTTTCCEEEEEECCTTSTTSCCCCSSS
T ss_pred EECCEEEEEEEEeccCCC-CCEEEEecccc--ccHHHHHHHHHhhccc----cCCcccceeeecccccccCCCCCCCCCC
Confidence 446999999755433221 78999999999 9999999999999986 5 999999999999999764 4
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhh
Q 017180 143 DYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRY 222 (376)
Q Consensus 143 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~ 222 (376)
.++...+++++..+++.++ ..+++++|||+||.++..++..+|+.+.++++++.......... ..........
T Consensus 161 ~y~~~~~a~~~~~l~~~lg------~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~ 233 (394)
T d1qo7a_ 161 DFGLMDNARVVDQLMKDLG------FGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRAPPEGP-SIESLSAAEK 233 (394)
T ss_dssp CCCHHHHHHHHHHHHHHTT------CTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCSCSSSC-CGGGSCHHHH
T ss_pred ccCHHHHHHHHHHHHhhcc------CcceEEEEecCchhHHHHHHHHhhccccceeEeeeccccccccc-ccccchhhhH
Confidence 7999999999999999997 78899999999999999999999999999988865432111110 0000000000
Q ss_pred HHHHhhh---ccCchhh--------HHhhhhhccHHHHHHHHHhcc-cCCCCCCChHHHHHHHHHHhccCC-CchhHHHh
Q 017180 223 GLLRGTL---RAPGVGW--------MMYNMLVSNEKAIQSQYKSHV-YSNPDNVTPGIVESRYALTKRKGA-RYVPAAFL 289 (376)
Q Consensus 223 ~~~~~~~---~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 289 (376)
....... ....... .........+..+........ .......+++.+............ ......+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~ 313 (394)
T d1qo7a_ 234 EGIARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYR 313 (394)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHHHTTCHHHHGGGHH
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhhhhcccccchhhhHHHHHhhhcccccCCHHHHHHHHHHHhhccccchhHHHHH
Confidence 0110000 0000000 000000000111111111100 001123333333322222221111 11111111
Q ss_pred hccCCCCC-cHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCC-ceEEEeCCC-CCCCCCChHHHHHHHHH
Q 017180 290 TGLLDPVN-SREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGV-TKFVEVPGA-LLPQEEYPAMVAQELYQ 366 (376)
Q Consensus 290 ~~~~~~~~-~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~-H~~~~e~pe~~~~~i~~ 366 (376)
........ ..........+| ++|+++++|++|...+++. +.+..++ +++.++++| |++++|+||++++.|.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~i--~vPtlv~~g~~D~~~~p~~---~~~~~~~~~~~~~~~~~GHf~~~E~Pe~~a~~I~~ 388 (394)
T d1qo7a_ 314 ETTPTASAPNGATMLQKELYI--HKPFGFSFFPKDLCPVPRS---WIATTGNLVFFRDHAEGGHFAALERPRELKTDLTA 388 (394)
T ss_dssp HHCC---------CTTTTTCE--EEEEEEEECTBSSSCCCHH---HHGGGEEEEEEEECSSCBSCHHHHCHHHHHHHHHH
T ss_pred HHhhcccccchhhhhccCCcc--cCCeEEEEeCCCccccHHH---HHHhccCceEEEEcCCcCCchHHhCHHHHHHHHHH
Confidence 11111000 000011123356 8999999999998766543 3334444 567889988 99999999999999999
Q ss_pred HHHhh
Q 017180 367 FLQQT 371 (376)
Q Consensus 367 fl~~~ 371 (376)
||+++
T Consensus 389 Fl~~v 393 (394)
T d1qo7a_ 389 FVEQV 393 (394)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99986
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.96 E-value=2.8e-27 Score=198.06 Aligned_cols=223 Identities=9% Similarity=0.098 Sum_probs=144.6
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHH---hCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLI---NAPDSPVSS 166 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l---~~l~~~~~~ 166 (376)
+++|||+||++ ++...|..+++.|+++ ||+|+++|+||||.|..+.......+..+++..++ +..+
T Consensus 11 ~~~vvliHG~~--~~~~~~~~l~~~L~~~----G~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 79 (242)
T d1tqha_ 11 ERAVLLLHGFT--GNSADVRMLGRFLESK----GYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNKG----- 79 (242)
T ss_dssp SCEEEEECCTT--CCTHHHHHHHHHHHHT----TCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHHT-----
T ss_pred CCeEEEECCCC--CCHHHHHHHHHHHHHC----CCEEEEEeCCCCccccccccccchhHHHHHHHHHHhhhhhcc-----
Confidence 56799999999 9999999999999986 99999999999999985545556666555555444 4443
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccH
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNE 246 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (376)
.++++++||||||.+++.++.++|.. .++++++...... .........
T Consensus 80 -~~~~~l~G~S~Gg~~~~~~~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~~--------------------- 127 (242)
T d1tqha_ 80 -YEKIAVAGLSLGGVFSLKLGYTVPIE--GIVTMCAPMYIKS--------EETMYEGVL--------------------- 127 (242)
T ss_dssp -CCCEEEEEETHHHHHHHHHHTTSCCS--CEEEESCCSSCCC--------HHHHHHHHH---------------------
T ss_pred -cCceEEEEcchHHHHhhhhcccCccc--ccccccccccccc--------hhHHHHHHH---------------------
Confidence 67899999999999999999998865 5566655321100 000000000
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCC
Q 017180 247 KAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRR 326 (376)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~ 326 (376)
.......... ..................... ...... ........+..+ ++|+|+++|++|..+
T Consensus 128 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~--~~p~lii~g~~D~~~ 191 (242)
T d1tqha_ 128 EYAREYKKRE------GKSEEQIEQEMEKFKQTPMKT-LKALQE-------LIADVRDHLDLI--YAPTFVVQARHDEMI 191 (242)
T ss_dssp HHHHHHHHHH------TCCHHHHHHHHHHHTTSCCTT-HHHHHH-------HHHHHHHTGGGC--CSCEEEEEETTCSSS
T ss_pred HHHHHHhhhc------cchhhhHHHHHhhhhhhccch-hhcccc-------ccccccccccee--ccccceeecccCCcc
Confidence 0000000000 000111111111111110000 000000 011134456677 999999999999999
Q ss_pred CHHHHHHHhccc--CCceEEEeCCC-CCCCCC-ChHHHHHHHHHHHHhh
Q 017180 327 SKAEMEALKGAK--GVTKFVEVPGA-LLPQEE-YPAMVAQELYQFLQQT 371 (376)
Q Consensus 327 ~~~~~~~~~~~~--~~~~~~~~~~~-H~~~~e-~pe~~~~~i~~fl~~~ 371 (376)
+.+..+.+.+.. +++++++++++ |+++.| +|+++++.|.+||+++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~Fl~~l 240 (242)
T d1tqha_ 192 NPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 240 (242)
T ss_dssp CTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHcCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 999999887654 67899999999 998876 5999999999999875
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.95 E-value=5.1e-27 Score=210.78 Aligned_cols=269 Identities=9% Similarity=0.015 Sum_probs=149.1
Q ss_pred CCCCcEEEecCCCCCccchHhH------HHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC---------CCCCH-----H
Q 017180 88 DPSKNILMIPTISDVSTVEEWR------LVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK---------MDYNA-----D 147 (376)
Q Consensus 88 ~~~~~vvllHG~~~~~~~~~~~------~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~---------~~~~~-----~ 147 (376)
.++|+|||+||++ +++..|. .++..|.++ ||+|+++|+||||.|+.+. ..++. +
T Consensus 56 ~~~~~vlllHG~~--~~~~~~~~~~~~~sla~~L~~~----Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~ 129 (377)
T d1k8qa_ 56 GRRPVAFLQHGLL--ASATNWISNLPNNSLAFILADA----GYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKY 129 (377)
T ss_dssp TTCCEEEEECCTT--CCGGGGSSSCTTTCHHHHHHHT----TCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHT
T ss_pred CCCCeEEEECCCc--cchhHHhhcCccchHHHHHHHC----CCEEEEEcCCCCCCCCCCCCCCCcchhhccCCHHHHhhh
Confidence 3378999999999 8888884 367888886 9999999999999998432 12333 3
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCC-CCchhhh-hHHH
Q 017180 148 VMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGR-DSSMETR-YGLL 225 (376)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~-~~~~~~~-~~~~ 225 (376)
++.+++..+++.++ .++++|+||||||.+++.+|.++|+.+++++++........+..... ....... ....
T Consensus 130 Dl~~~i~~i~~~~g------~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (377)
T d1k8qa_ 130 DLPATIDFILKKTG------QDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLF 203 (377)
T ss_dssp HHHHHHHHHHHHHC------CSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHH
T ss_pred hHHHHHHHHHHHcC------CCCEEEEEecchHHHHHHHHHhhhhhhhhceeEeeccccccccchhhHHHHHHhcchhhh
Confidence 45556677777776 78899999999999999999999999999888754321111111000 0000000 0000
Q ss_pred Hhhh----ccC--chhhHHhhhh---hccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHH----hhcc
Q 017180 226 RGTL----RAP--GVGWMMYNML---VSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAF----LTGL 292 (376)
Q Consensus 226 ~~~~----~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 292 (376)
.... ..+ .......... .................+....+......+...............+ ....
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
T d1k8qa_ 204 KLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGK 283 (377)
T ss_dssp HHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCS
T ss_pred hhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCCcccccHHHhhhhhhcccccchHHHHHHHHHHHhcCc
Confidence 0000 000 0000000000 0001111111111111111111222111111000000000000000 0000
Q ss_pred ---CCCCCcHHH---------HHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccCCc-eEEEeCCC-CC---CCCC
Q 017180 293 ---LDPVNSREE---------FLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKGVT-KFVEVPGA-LL---PQEE 355 (376)
Q Consensus 293 ---~~~~~~~~~---------~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~-H~---~~~e 355 (376)
.+....... ....+++| ++|+|+|+|++|.+++++..+.+.+..|+. +.++++++ |+ .-.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~vPvL~i~G~~D~~~~~~~~~~l~~~lp~~~~~~~i~~~GH~d~~~~~~ 361 (377)
T d1k8qa_ 284 FQAFDWGSPVQNMMHYHQSMPPYYNLTDM--HVPIAVWNGGNDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMD 361 (377)
T ss_dssp CBCCCCSSHHHHHHHHSSSSCCBCCGGGC--CSCEEEEEETTCSSSCHHHHHHHHTTCTTEEEEEEETTCCTTHHHHCTT
T ss_pred chhccchhhhhhhhhhcccCchhhhHhhC--CCCEEEEEeCCCCccCHHHHHHHHHHCCCCeEEEEeCCCCCcchhhccc
Confidence 000000000 11135677 999999999999999999999999888875 78889998 97 3457
Q ss_pred ChHHHHHHHHHHHHh
Q 017180 356 YPAMVAQELYQFLQQ 370 (376)
Q Consensus 356 ~pe~~~~~i~~fl~~ 370 (376)
.++++.+.|.+||++
T Consensus 362 a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 362 APQAVYNEIVSMMGT 376 (377)
T ss_dssp HHHHTHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhc
Confidence 799999999999985
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=2.8e-27 Score=201.60 Aligned_cols=102 Identities=10% Similarity=0.043 Sum_probs=91.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
++||||+||++ ++...|+.+++.|.+... +|+|+++|+||||.|+.+ ..++.+++++++.++++++ .+
T Consensus 2 ~~PvvllHG~~--~~~~~~~~~~~~l~~~~~--~~~v~~~d~~G~g~S~~~-~~~~~~~~~~~l~~~l~~l-------~~ 69 (268)
T d1pjaa_ 2 YKPVIVVHGLF--DSSYSFRHLLEYINETHP--GTVVTVLDLFDGRESLRP-LWEQVQGFREAVVPIMAKA-------PQ 69 (268)
T ss_dssp CCCEEEECCTT--CCGGGGHHHHHHHHHHST--TCCEEECCSSCSGGGGSC-HHHHHHHHHHHHHHHHHHC-------TT
T ss_pred CCCEEEECCCC--CCHHHHHHHHHHHHhhCC--CeEEEEeCCCCCCCCCCc-cccCHHHHHHHHHHHHhcc-------CC
Confidence 56899999999 999999999999987422 699999999999999866 4578999999999999998 37
Q ss_pred cEEEEecchHHHHHHHHHHhCCC-CcceEEEeccC
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLV-KPTAIAAVAPT 203 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~p~ 203 (376)
+++|+||||||.+|+.+|.++|+ +|+++|++++.
T Consensus 70 ~~~lvGhS~GG~ia~~~a~~~p~~~v~~lvl~~~~ 104 (268)
T d1pjaa_ 70 GVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSP 104 (268)
T ss_dssp CEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCC
T ss_pred eEEEEccccHHHHHHHHHHHCCccccceEEEECCC
Confidence 89999999999999999999998 69999999874
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.94 E-value=4e-25 Score=192.29 Aligned_cols=228 Identities=10% Similarity=0.063 Sum_probs=141.6
Q ss_pred CCceeEEEEecccCC--CCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC-cCCCCCCCCCCHHH
Q 017180 72 ENSINIYYEKHERES--PDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-GYSDRPKMDYNADV 148 (376)
Q Consensus 72 ~~g~~l~y~~~g~~~--~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~-G~S~~~~~~~~~~~ 148 (376)
.||.+|++...-+.+ ++++++||++||++ ++...|..+++.|.++ ||+|+++|+||| |.|+.....++..+
T Consensus 12 ~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~--~~~~~~~~~a~~L~~~----G~~Vi~~D~rGh~G~S~g~~~~~~~~~ 85 (302)
T d1thta_ 12 NNGQELHVWETPPKENVPFKNNTILIASGFA--RRMDHFAGLAEYLSTN----GFHVFRYDSLHHVGLSSGSIDEFTMTT 85 (302)
T ss_dssp TTTEEEEEEEECCCTTSCCCSCEEEEECTTC--GGGGGGHHHHHHHHTT----TCCEEEECCCBCC--------CCCHHH
T ss_pred CCCCEEEEEEecCcCCCCCCCCEEEEeCCCc--chHHHHHHHHHHHHHC----CCEEEEecCCCCCCCCCCcccCCCHHH
Confidence 457778776654322 23357899999999 9999999999999997 999999999998 88886667788989
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhh
Q 017180 149 MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGT 228 (376)
Q Consensus 149 ~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (376)
+.+|+.++++.+... ..++++|+||||||.+++.+|.. ..++++|+.+|... ........
T Consensus 86 ~~~dl~~vi~~l~~~---~~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~---------------~~~~~~~~ 145 (302)
T d1thta_ 86 GKNSLCTVYHWLQTK---GTQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVN---------------LRDTLEKA 145 (302)
T ss_dssp HHHHHHHHHHHHHHT---TCCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSC---------------HHHHHHHH
T ss_pred HHHHHHHHHHhhhcc---CCceeEEEEEchHHHHHHHHhcc--cccceeEeeccccc---------------HHHHHHHH
Confidence 999988777766421 25689999999999999998865 35889999987320 00111111
Q ss_pred hccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhc
Q 017180 229 LRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFAD 308 (376)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
+........ .. ......... ........+.... .....+ ......+.+.+
T Consensus 146 ~~~~~~~~~-~~-----------~~~~~~~~~---~~~~~~~~~~~~~------------~~~~~~---~~~~~~~~~~~ 195 (302)
T d1thta_ 146 LGFDYLSLP-ID-----------ELPNDLDFE---GHKLGSEVFVRDC------------FEHHWD---TLDSTLDKVAN 195 (302)
T ss_dssp HSSCGGGSC-GG-----------GCCSEEEET---TEEEEHHHHHHHH------------HHTTCS---SHHHHHHHHTT
T ss_pred Hhhccchhh-hh-----------hcccccccc---ccchhhHHHHHHH------------HHhHHH---HHHHHHHHHhh
Confidence 100000000 00 000000000 0000000000000 000000 12224556778
Q ss_pred ccCCCcEEEEEeCCCCCCCHHHHHHHhccc--CCceEEEeCCC-CCCCCCChH
Q 017180 309 LEGKLPLLVVSTEGSPRRSKAEMEALKGAK--GVTKFVEVPGA-LLPQEEYPA 358 (376)
Q Consensus 309 i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~-H~~~~e~pe 358 (376)
+ ++|+|+++|++|.+++.+..+.+.+.. +++++++++|+ |.+. |+++
T Consensus 196 i--~~PvLii~G~~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~~H~l~-e~~~ 245 (302)
T d1thta_ 196 T--SVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLV 245 (302)
T ss_dssp C--CSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHH
T ss_pred c--CCCEEEEEeCCCCccCHHHHHHHHHhCCCCCceEEEecCCCcccc-cChH
Confidence 8 999999999999999999999998765 46899999999 9865 4454
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.92 E-value=5.1e-24 Score=189.77 Aligned_cols=226 Identities=12% Similarity=0.087 Sum_probs=148.5
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-CCCCCHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-KMDYNADVMEKF 152 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~~ 152 (376)
|.+|.....-+..+++.|+||++||+. ++...|..+...|.++ ||.|+++|+||||.|... ......+.....
T Consensus 115 g~~l~g~l~~P~~~~~~P~Vi~~hG~~--~~~e~~~~~~~~l~~~----G~~vl~~D~~G~G~s~~~~~~~~~~~~~~~~ 188 (360)
T d2jbwa1 115 GIPMPVYVRIPEGPGPHPAVIMLGGLE--STKEESFQMENLVLDR----GMATATFDGPGQGEMFEYKRIAGDYEKYTSA 188 (360)
T ss_dssp TEEEEEEEECCSSSCCEEEEEEECCSS--CCTTTTHHHHHHHHHT----TCEEEEECCTTSGGGTTTCCSCSCHHHHHHH
T ss_pred CcccceEEEecCCCCCceEEEEeCCCC--ccHHHHHHHHHHHHhc----CCEEEEEccccccccCccccccccHHHHHHH
Confidence 667765555443333368899999999 8888888888999987 999999999999999743 334556666777
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAP 232 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
+.+++.... .+..+++.|+||||||.+++.+|...| +|+++|.+++....... . ..
T Consensus 189 v~d~l~~~~---~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~---------~----------~~- 244 (360)
T d2jbwa1 189 VVDLLTKLE---AIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYW---------D----------LE- 244 (360)
T ss_dssp HHHHHHHCT---TEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTG---------G----------GS-
T ss_pred HHHHHHhcc---cccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHHH---------h----------hh-
Confidence 777776553 112467999999999999999999877 68999998774211000 0 00
Q ss_pred chhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCC
Q 017180 233 GVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGK 312 (376)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 312 (376)
.......+...... ...++........ .+ ....+.+| +
T Consensus 245 -------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~-----------------~~-------~~~~~~~i--~ 282 (360)
T d2jbwa1 245 -------------TPLTKESWKYVSKV---DTLEEARLHVHAA-----------------LE-------TRDVLSQI--A 282 (360)
T ss_dssp -------------CHHHHHHHHHHTTC---SSHHHHHHHHHHH-----------------TC-------CTTTGGGC--C
T ss_pred -------------hhhhhHHHHHhccC---CchHHHHHHHHhh-----------------cc-------hhhhHhhC--C
Confidence 00000000000000 0000000000000 00 12246678 9
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHhcccC--CceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 313 LPLLVVSTEGSPRRSKAEMEALKGAKG--VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 313 ~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
||+|+++|++|. +|.+..+.+.+..+ +.++++++++ |+. .+.+.+....|.+||.+.+.
T Consensus 283 ~P~Lii~G~~D~-vp~~~~~~l~~~~~~~~~~l~~~~~g~H~~-~~~~~~~~~~i~dWl~~~L~ 344 (360)
T d2jbwa1 283 CPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMADWLYDVLV 344 (360)
T ss_dssp SCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHHHHHHHHHT
T ss_pred CCEEEEEeCCCC-cCHHHHHHHHHhcCCCCeEEEEECCCCcCC-CcChHHHHHHHHHHHHHHhc
Confidence 999999999998 58888888876654 5677888998 975 45667788899999998764
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.90 E-value=6.5e-22 Score=161.84 Aligned_cols=175 Identities=10% Similarity=0.061 Sum_probs=124.9
Q ss_pred CcEEEecCC---CCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 91 KNILMIPTI---SDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 91 ~~vvllHG~---~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
+.+|++|+. |++.+...+..++..|+++ ||.|+.+|+||+|.|+..... .....+|+.++++.+.... .
T Consensus 36 ~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~----G~~vlrfd~RG~G~S~g~~~~--~~~~~~D~~a~~~~~~~~~--~ 107 (218)
T d2fuka1 36 VTAIVCHPLSTEGGSMHNKVVTMAARALREL----GITVVRFNFRSVGTSAGSFDH--GDGEQDDLRAVAEWVRAQR--P 107 (218)
T ss_dssp EEEEEECSCTTTTCSTTCHHHHHHHHHHHTT----TCEEEEECCTTSTTCCSCCCT--TTHHHHHHHHHHHHHHHHC--T
T ss_pred cEEEEECCCCCCCcCCCChHHHHHHHHHHHc----CCeEEEeecCCCccCCCccCc--CcchHHHHHHHHHHHhhcc--c
Confidence 456778854 3223344567788889887 999999999999999854322 2344555555444332111 2
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEK 247 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (376)
.++++++||||||.+++.+|.+. .++++|+++|.. ...
T Consensus 108 ~~~v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~-----------------------------------~~~----- 145 (218)
T d2fuka1 108 TDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPA-----------------------------------GRW----- 145 (218)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCB-----------------------------------TTB-----
T ss_pred CceEEEEEEcccchhhhhhhccc--ccceEEEeCCcc-----------------------------------cch-----
Confidence 67899999999999999998864 477999998831 000
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCC
Q 017180 248 AIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRS 327 (376)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~ 327 (376)
.+ ...++ .+|+|+|||++|..+|
T Consensus 146 ---------~~----------------------------------------------~~~~~--~~P~Lvi~G~~D~~vp 168 (218)
T d2fuka1 146 ---------DF----------------------------------------------SDVQP--PAQWLVIQGDADEIVD 168 (218)
T ss_dssp ---------CC----------------------------------------------TTCCC--CSSEEEEEETTCSSSC
T ss_pred ---------hh----------------------------------------------hcccc--ccceeeEecCCCcCcC
Confidence 00 00022 7899999999999999
Q ss_pred HHHHHHHhccc-CCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 328 KAEMEALKGAK-GVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 328 ~~~~~~~~~~~-~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
.+..+++.+.. ...++++++++ |+.. .+-+++.+.+.+|+++.+.
T Consensus 169 ~~~~~~l~~~~~~~~~l~~i~ga~H~f~-~~~~~l~~~~~~~v~~~l~ 215 (218)
T d2fuka1 169 PQAVYDWLETLEQQPTLVRMPDTSHFFH-RKLIDLRGALQHGVRRWLP 215 (218)
T ss_dssp HHHHHHHHTTCSSCCEEEEETTCCTTCT-TCHHHHHHHHHHHHGGGCS
T ss_pred HHHHHHHHHHccCCceEEEeCCCCCCCC-CCHHHHHHHHHHHHHHhcC
Confidence 99999887554 45789999999 9754 4446799999999998765
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.89 E-value=3e-22 Score=161.50 Aligned_cols=178 Identities=8% Similarity=0.052 Sum_probs=124.1
Q ss_pred cEEEecCCCCCccchH--hHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 92 NILMIPTISDVSTVEE--WRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 92 ~vvllHG~~~~~~~~~--~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
.|||+||++ ++... |..+.+.|.++ ||+|+++|+||+|.+ ..+++.+.+...++.. ..
T Consensus 3 ~V~~vHG~~--~~~~~~~~~~l~~~L~~~----G~~v~~~d~p~~~~~-------~~~~~~~~l~~~~~~~-------~~ 62 (186)
T d1uxoa_ 3 QVYIIHGYR--ASSTNHWFPWLKKRLLAD----GVQADILNMPNPLQP-------RLEDWLDTLSLYQHTL-------HE 62 (186)
T ss_dssp EEEEECCTT--CCTTSTTHHHHHHHHHHT----TCEEEEECCSCTTSC-------CHHHHHHHHHTTGGGC-------CT
T ss_pred EEEEECCCC--CCcchhHHHHHHHHHHhC----CCEEEEeccCCCCcc-------hHHHHHHHHHHHHhcc-------CC
Confidence 599999999 65433 67788999987 999999999999965 3667777777666654 57
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHH
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAI 249 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (376)
+++|+||||||.+++.++.++|+.....+++.+... .... +. ...
T Consensus 63 ~~~lvGhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~--~~~~--------------------~~-----~~~-------- 107 (186)
T d1uxoa_ 63 NTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGF--AKSL--------------------PT-----LQM-------- 107 (186)
T ss_dssp TEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCC--SSCC--------------------TT-----CGG--------
T ss_pred CcEEEEechhhHHHHHHHHhCCccceeeEEeecccc--cccc--------------------hh-----hhh--------
Confidence 899999999999999999999876554444433210 0000 00 000
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHH
Q 017180 250 QSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKA 329 (376)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~ 329 (376)
....... .. ......++ .+|+++|+|++|+++|.+
T Consensus 108 ----~~~~~~~--~~-------------------------------------~~~~~~~~--~~p~lvi~g~~D~~vp~~ 142 (186)
T d1uxoa_ 108 ----LDEFTQG--SF-------------------------------------DHQKIIES--AKHRAVIASKDDQIVPFS 142 (186)
T ss_dssp ----GGGGTCS--CC-------------------------------------CHHHHHHH--EEEEEEEEETTCSSSCHH
T ss_pred ----hhhhhcc--cc-------------------------------------cccccccC--CCCEEEEecCCCCCCCHH
Confidence 0000000 00 01112223 789999999999999999
Q ss_pred HHHHHhcccCCceEEEeCCC-CCCCCC---ChHHHHHHHHHHHHh
Q 017180 330 EMEALKGAKGVTKFVEVPGA-LLPQEE---YPAMVAQELYQFLQQ 370 (376)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~-H~~~~e---~pe~~~~~i~~fl~~ 370 (376)
..+.+.+.. ++++++++++ |+...+ .-.++.+.|.+||.+
T Consensus 143 ~~~~l~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 143 FSKDLAQQI-DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 186 (186)
T ss_dssp HHHHHHHHT-TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHc-CCEEEEeCCCCCcCccccCcccHHHHHHHHHHHcC
Confidence 999998766 6899999999 986554 224688889999874
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.89 E-value=1.6e-22 Score=173.93 Aligned_cols=213 Identities=15% Similarity=0.153 Sum_probs=141.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC---CCCCHHHHHHHHHH-HHhCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK---MDYNADVMEKFVVD-LINAPDSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~---~~~~~~~~~~~l~~-~l~~l~~~~~ 165 (376)
+++|+|+||+...++...|..++..|.. +++|+++|+||||.|+.+. ...+++++++++.+ +++..+
T Consensus 60 ~~~l~c~~~~~~~g~~~~y~~la~~L~~-----~~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~~~---- 130 (283)
T d2h7xa1 60 RAVLVGCTGTAANGGPHEFLRLSTSFQE-----ERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAG---- 130 (283)
T ss_dssp CCEEEEECCCCTTCSTTTTHHHHHTTTT-----TCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHT----
T ss_pred CceEEEeCCCCCCCCHHHHHHHHHhcCC-----CceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHHHhcC----
Confidence 6889999996433777899999999998 7999999999999988443 23588999988765 556554
Q ss_pred CCCCcEEEEecchHHHHHHHHHHh----CCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhh
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKK----NLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNM 241 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~----~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (376)
.++++|+||||||.+|+.+|.+ ++..|.++|++++...... ... ....
T Consensus 131 --~~P~vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~----------~~~--------------~~~~-- 182 (283)
T d2h7xa1 131 --DAPVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQ----------EPI--------------EVWS-- 182 (283)
T ss_dssp --TSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCC----------HHH--------------HHTH--
T ss_pred --CCceEEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccc----------cch--------------hhhh--
Confidence 7899999999999999999885 3568999999987421100 000 0000
Q ss_pred hhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeC
Q 017180 242 LVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTE 321 (376)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~ 321 (376)
..... ....... ....+..+...... ....... ....+ ++|+++|+|+
T Consensus 183 ----~~~~~-~~~~~~~---~~~~~~~l~a~~~~----------~~~~~~~------------~~~~~--~~Pvl~i~g~ 230 (283)
T d2h7xa1 183 ----RQLGE-GLFAGEL---EPMSDARLLAMGRY----------ARFLAGP------------RPGRS--SAPVLLVRAS 230 (283)
T ss_dssp ----HHHHH-HHHHTCS---SCCCHHHHHHHHHH----------HHHHHSC------------CCCCC--CSCEEEEEES
T ss_pred ----hhhHH-Hhhcccc---cccccHHHHHHHHH----------HHHHhhc------------ccccc--CCCeEEEEeC
Confidence 00111 1111111 12222222111110 0111000 12345 8999999999
Q ss_pred CCCCCCHHHHHHHhcccC-CceEEEeCCCCC-CCCCChHHHHHHHHHHHHhh
Q 017180 322 GSPRRSKAEMEALKGAKG-VTKFVEVPGALL-PQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 322 ~D~~~~~~~~~~~~~~~~-~~~~~~~~~~H~-~~~e~pe~~~~~i~~fl~~~ 371 (376)
+|..++.+....+.+..+ ..+++.++++|+ ++.|+++.+++.|.+||+++
T Consensus 231 ~d~~~~~~~~~~w~~~~~~~~~~~~v~G~H~~ml~e~~~~vA~~i~~~L~~l 282 (283)
T d2h7xa1 231 EPLGDWQEERGDWRAHWDLPHTVADVPGDHFTMMRDHAPAVAEAVLSWLDAI 282 (283)
T ss_dssp SCSSCCCGGGCCCSCCCSSCSEEEEESSCTTHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhCCCCcEEEEEcCCCcccccCCHHHHHHHHHHHHHhc
Confidence 999998777777776655 468999998887 44578999999999999875
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.89 E-value=8.3e-23 Score=170.43 Aligned_cols=207 Identities=14% Similarity=0.092 Sum_probs=122.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+++|||+||++ ++...|..+++.|. +|+|+++|++|+|. .++++.+.+.++. ..+
T Consensus 17 ~~~l~~lhg~~--g~~~~~~~la~~L~------~~~v~~~~~~g~~~------------~a~~~~~~i~~~~-----~~~ 71 (230)
T d1jmkc_ 17 EQIIFAFPPVL--GYGLMYQNLSSRLP------SYKLCAFDFIEEED------------RLDRYADLIQKLQ-----PEG 71 (230)
T ss_dssp SEEEEEECCTT--CCGGGGHHHHHHCT------TEEEEEECCCCSTT------------HHHHHHHHHHHHC-----CSS
T ss_pred CCeEEEEcCCC--CCHHHHHHHHHHCC------CCEEeccCcCCHHH------------HHHHHHHHHHHhC-----CCC
Confidence 67999999999 99999999999994 69999999999974 2344444444433 367
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEe---ccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccH
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAV---APTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNE 246 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~---~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (376)
+++|+||||||.+|+.+|.+.|+++..++.+ .+........... . ... ...
T Consensus 72 ~~~lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~--------------~---------~~~---~~~ 125 (230)
T d1jmkc_ 72 PLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDG--------------R---------TVE---SDV 125 (230)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC----------------------------------CCH
T ss_pred cEEEEeeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhhh--------------h---------hhh---hhh
Confidence 8999999999999999999777665555433 3311000000000 0 000 000
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCC
Q 017180 247 KAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRR 326 (376)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~ 326 (376)
..+..... .......+........... ....... .......+ ++|+++|+|++|..+
T Consensus 126 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~------~~~~~~~-----------~~~~~~~i--~~p~l~i~g~~D~~~ 182 (230)
T d1jmkc_ 126 EALMNVNR----DNEALNSEAVKHGLKQKTH------AFYSYYV-----------NLISTGQV--KADIDLLTSGADFDI 182 (230)
T ss_dssp HHHHHHTT----TCSGGGSHHHHHHHHHHHH------HHHHHHH-----------HCCCCSCB--SSEEEEEECSSCCCC
T ss_pred hhhhhccc----cccccccHHHHHHHHHHHH------HHHHhhh-----------cccccccc--cCcceeeeecCCccc
Confidence 11110000 0000111111111111100 0000000 00122356 899999999999988
Q ss_pred CHHHHHHHhc-ccCCceEEEeCCCCCCCCCCh--HHHHHHHHHHHHhh
Q 017180 327 SKAEMEALKG-AKGVTKFVEVPGALLPQEEYP--AMVAQELYQFLQQT 371 (376)
Q Consensus 327 ~~~~~~~~~~-~~~~~~~~~~~~~H~~~~e~p--e~~~~~i~~fl~~~ 371 (376)
+.... .+.+ ..++.++++++++|+.+++.| +++++.|.+||++.
T Consensus 183 ~~~~~-~w~~~~~~~~~~~~i~g~H~~ml~~~~~~~va~~I~~~L~~~ 229 (230)
T d1jmkc_ 183 PEWLA-SWEEATTGAYRMKRGFGTHAEMLQGETLDRNAGILLEFLNTQ 229 (230)
T ss_dssp CTTEE-CSGGGBSSCEEEEECSSCGGGTTSHHHHHHHHHHHHHHHTCB
T ss_pred chhHH-HHHHhccCCcEEEEEcCCChhhcCCccHHHHHHHHHHHHhhc
Confidence 85543 3333 345778999996699888866 89999999999763
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.88 E-value=6.2e-21 Score=166.79 Aligned_cols=232 Identities=13% Similarity=0.037 Sum_probs=138.1
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCC--------
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDY-------- 144 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~-------- 144 (376)
+|.+|+....-+....+.|+||++||++ ++...|...+..|+++ ||.|+++|+||||.|+.+....
T Consensus 65 dg~~i~~~l~~P~~~~~~P~vv~~HG~~--~~~~~~~~~~~~la~~----Gy~vi~~D~rG~G~s~~~~~~~~~~~~~~~ 138 (318)
T d1l7aa_ 65 GNARITGWYAVPDKEGPHPAIVKYHGYN--ASYDGEIHEMVNWALH----GYATFGMLVRGQQRSEDTSISPHGHALGWM 138 (318)
T ss_dssp GGEEEEEEEEEESSCSCEEEEEEECCTT--CCSGGGHHHHHHHHHT----TCEEEEECCTTTSSSCCCCCCSSCCSSSST
T ss_pred CCcEEEEEEEecCCCCCceEEEEecCCC--CCccchHHHHHHHHHC----CCEEEEEeeCCCCCCCCCcccchhhhhcch
Confidence 4777754433222222368899999999 8999999999999987 9999999999999998443111
Q ss_pred ----------CHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCC
Q 017180 145 ----------NADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGR 214 (376)
Q Consensus 145 ----------~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~ 214 (376)
.......+....++.+.........++.++|+|+||..++..+...+. +.+++...|....
T Consensus 139 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~~~~~~~~~-------- 209 (318)
T d1l7aa_ 139 TKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSN-------- 209 (318)
T ss_dssp TTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCC--------
T ss_pred hhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc-cceEEEecccccc--------
Confidence 111222232222222210001124568999999999999999998764 6677766653100
Q ss_pred CCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCC
Q 017180 215 DSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLD 294 (376)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (376)
...........+. ..... ..... .............. ...
T Consensus 210 ------~~~~~~~~~~~~~------------~~~~~-~~~~~-------~~~~~~~~~~~~~~--------------~~~ 249 (318)
T d1l7aa_ 210 ------FERAIDVALEQPY------------LEINS-FFRRN-------GSPETEVQAMKTLS--------------YFD 249 (318)
T ss_dssp ------HHHHHHHCCSTTT------------THHHH-HHHHS-------CCHHHHHHHHHHHH--------------TTC
T ss_pred ------HHHHhhccccccc------------chhhh-hhhcc-------cccccccccccccc--------------ccc
Confidence 0000000000000 00000 00000 00000000000000 000
Q ss_pred CCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC-CceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 295 PVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG-VTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 295 ~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
....++++ ++|+|+++|++|.++|.+....+.+..+ ++++++++++ |.. ++++.+.+.+||++.+
T Consensus 250 -------~~~~~~~i--~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~~~l~~~~~~gH~~----~~~~~~~~~~fl~~~L 316 (318)
T d1l7aa_ 250 -------IMNLADRV--KVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEY----IPAFQTEKLAFFKQIL 316 (318)
T ss_dssp -------HHHHGGGC--CSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSC----CHHHHHHHHHHHHHHH
T ss_pred -------cccccccC--CCCEEEEEECCCCCcCHHHHHHHHHHcCCCcEEEEECCCCCCC----cHHHHHHHHHHHHHhC
Confidence 34456778 9999999999999999999888876655 6899999998 964 4567777888888765
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=1.5e-22 Score=173.54 Aligned_cols=105 Identities=9% Similarity=0.121 Sum_probs=78.7
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFV 153 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l 153 (376)
|.+|.+...++++ ++||||+||++ ++...|+.+++.| +++|+++|+||+|.|+ +++++++++
T Consensus 12 ~~~l~~l~~~~~~---~~Pl~l~Hg~~--gs~~~~~~l~~~L-------~~~v~~~d~~g~~~~~------~~~~~a~~~ 73 (286)
T d1xkta_ 12 GPTLMRLNSVQSS---ERPLFLVHPIE--GSTTVFHSLASRL-------SIPTYGLQCTRAAPLD------SIHSLAAYY 73 (286)
T ss_dssp SCSEEECCCCCCC---SCCEEEECCTT--CCCGGGHHHHHTC-------SSCEEEECCCTTSCCS------CHHHHHHHH
T ss_pred CCEEEEecCCCCC---CCeEEEECCCC--ccHHHHHHHHHHc-------CCeEEEEeCCCCCCCC------CHHHHHHHH
Confidence 4456665665554 67899999999 9999999877665 3789999999999875 467777776
Q ss_pred HHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEec
Q 017180 154 VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVA 201 (376)
Q Consensus 154 ~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~ 201 (376)
.+.+..+. ..++++|+||||||.+|+.+|.++|+++.++++++
T Consensus 74 ~~~~~~~~-----~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~ 116 (286)
T d1xkta_ 74 IDCIRQVQ-----PEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHN 116 (286)
T ss_dssp HHHHHHHC-----CSSCCEEEEETHHHHHHHHHHHHHHHC------CC
T ss_pred HHHHHHhc-----CCCceEEeecCCccHHHHHHHHHHHHcCCCceeEE
Confidence 65444432 37899999999999999999999999988887665
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.86 E-value=1.7e-22 Score=148.29 Aligned_cols=94 Identities=15% Similarity=0.341 Sum_probs=81.9
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHH
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKF 152 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~ 152 (376)
+|.+|+|.+.|+ +|||||+||.+ . .|. +.|.+ +|+||++|+||||.|+.+ .++.++++++
T Consensus 9 ~G~~l~y~~~G~-----G~pvlllHG~~--~---~w~---~~L~~-----~yrvi~~DlpG~G~S~~p--~~s~~~~a~~ 68 (122)
T d2dsta1 9 YGLNLVFDRVGK-----GPPVLLVAEEA--S---RWP---EALPE-----GYAFYLLDLPGYGRTEGP--RMAPEELAHF 68 (122)
T ss_dssp TTEEEEEEEECC-----SSEEEEESSSG--G---GCC---SCCCT-----TSEEEEECCTTSTTCCCC--CCCHHHHHHH
T ss_pred CCEEEEEEEEcC-----CCcEEEEeccc--c---ccc---ccccC-----CeEEEEEeccccCCCCCc--ccccchhHHH
Confidence 499999999997 88999999966 3 353 34566 899999999999999865 5899999999
Q ss_pred HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCC
Q 017180 153 VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV 192 (376)
Q Consensus 153 l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~ 192 (376)
+.+++++++ .++++|+||||||.+++.++...+.
T Consensus 69 i~~ll~~L~------i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 69 VAGFAVMMN------LGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp HHHHHHHTT------CCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHHhC------CCCcEEEEeCccHHHHHHHHhhccc
Confidence 999999997 7889999999999999999996443
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.85 E-value=1.1e-21 Score=156.83 Aligned_cols=172 Identities=10% Similarity=0.038 Sum_probs=134.1
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
++||||+||++ ++...|..+++.|.++ ||+|+.+|.+|+|.+.... ..+.+.+++++.+++++++ .+
T Consensus 2 ~~PVv~vHG~~--~~~~~~~~l~~~l~~~----g~~~~~~~~~~~~~~~~~~-~~~~~~l~~~i~~~~~~~~------~~ 68 (179)
T d1ispa_ 2 HNPVVMVHGIG--GASFNFAGIKSYLVSQ----GWSRDKLYAVDFWDKTGTN-YNNGPVLSRFVQKVLDETG------AK 68 (179)
T ss_dssp CCCEEEECCTT--CCGGGGHHHHHHHHHT----TCCGGGEEECCCSCTTCCH-HHHHHHHHHHHHHHHHHHC------CS
T ss_pred CCCEEEECCCC--CCHHHHHHHHHHHHHc----CCeEEEEecCCcccccccc-chhhhhHHHHHHHHHHhcC------Cc
Confidence 56899999999 9999999999999997 8999999999999887442 3456677888888888876 68
Q ss_pred cEEEEecchHHHHHHHHHHhC--CCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHH
Q 017180 170 DLVIFGGGHAATLTVRAAKKN--LVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEK 247 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~--p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (376)
++++|||||||.++..++.++ |++|+++|++++...+. .. .
T Consensus 69 ~v~lvGHSmGG~va~~~~~~~~~~~~V~~~V~l~~p~~g~---------------------------------~~-~--- 111 (179)
T d1ispa_ 69 KVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLT---------------------------------TG-K--- 111 (179)
T ss_dssp CEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGT---------------------------------CS-B---
T ss_pred eEEEEeecCcCHHHHHHHHHcCCchhhCEEEEECCCCCCc---------------------------------hh-h---
Confidence 899999999999999999876 67899999998731000 00 0
Q ss_pred HHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCC
Q 017180 248 AIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRS 327 (376)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~ 327 (376)
.. +.. .... .+|++.|+|+.|.+++
T Consensus 112 ---------~l--------------------~~~------------------------~~~~--~~~~~~i~~~~D~~v~ 136 (179)
T d1ispa_ 112 ---------AL--------------------PGT------------------------DPNQ--KILYTSIYSSADMIVM 136 (179)
T ss_dssp ---------CC--------------------CCS------------------------CTTC--CCEEEEEEETTCSSSC
T ss_pred ---------hc--------------------CCc------------------------cccc--CceEEEEEecCCcccC
Confidence 00 000 0001 6799999999999999
Q ss_pred HHHHHHHhcccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhc
Q 017180 328 KAEMEALKGAKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
+... ..+.++-+.+++. |.....+| ++.+.|.+||+..-
T Consensus 137 ~~~~-----~l~~~~~~~~~~~~H~~l~~~~-~v~~~i~~~L~~~~ 176 (179)
T d1ispa_ 137 NYLS-----RLDGARNVQIHGVGHIGLLYSS-QVNSLIKEGLNGGG 176 (179)
T ss_dssp HHHH-----CCBTSEEEEESSCCTGGGGGCH-HHHHHHHHHHTTTC
T ss_pred chhh-----cCCCceEEEECCCCchhhccCH-HHHHHHHHHHhccC
Confidence 7543 3567788889998 99888888 58899999997653
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.84 E-value=2.5e-20 Score=163.91 Aligned_cols=276 Identities=11% Similarity=0.074 Sum_probs=165.9
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHh-HHHH---HHHHhhhCCcceEEEEeCCCCCcCCC-CCC-------
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEW-RLVA---QDIVQRVGKVNWRATIVDWPGLGYSD-RPK------- 141 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~-~~~~---~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~------- 141 (376)
.++|.|+.+|+-+.+...+||+.|++.++.+...| ..++ ..|.- ..|.||++|..|.|.++ .|.
T Consensus 28 ~~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt----~kyfVI~~n~lG~~~gst~p~s~~p~~~ 103 (376)
T d2vata1 28 DVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDT----SRYFIICLNYLGSPFGSAGPCSPDPDAE 103 (376)
T ss_dssp EEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCT----TTCEEEEECCTTCSSSSSSTTSBCTTTC
T ss_pred CceEEEEeecccCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCc----cceEEEEeccCCCCcCCCCCCCCCcccc
Confidence 56899999998665446678888999955555555 3332 12222 27999999999988654 221
Q ss_pred ---------CCCCHHHHHHHHHHHHhCCCCCCCCCCCcE-EEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcc
Q 017180 142 ---------MDYNADVMEKFVVDLINAPDSPVSSSESDL-VIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIV 211 (376)
Q Consensus 142 ---------~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~-~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~ 211 (376)
..+|+.++++.-..++++|+ .+++ .|+|+||||+.|+++|..+|++|+++|.++....
T Consensus 104 ~~~~yg~~FP~~ti~D~v~aq~~ll~~LG------I~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~------ 171 (376)
T d2vata1 104 GQRPYGAKFPRTTIRDDVRIHRQVLDRLG------VRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCR------ 171 (376)
T ss_dssp --CBCGGGCCCCCHHHHHHHHHHHHHHHT------CCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSB------
T ss_pred cCCcccccCCcchhHHHHHHHHHHHHHhC------cceEEEeecccHHHHHHHHHHHhchHHHhhhcccccccc------
Confidence 14688999999899999998 6665 6789999999999999999999999999987431
Q ss_pred cCCCCchhhh-hHHHHh-hhccCch-------------hhHHhhh----hhccHHHHHHHHHhcccCC-CC---------
Q 017180 212 FGRDSSMETR-YGLLRG-TLRAPGV-------------GWMMYNM----LVSNEKAIQSQYKSHVYSN-PD--------- 262 (376)
Q Consensus 212 ~~~~~~~~~~-~~~~~~-~~~~~~~-------------~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~--------- 262 (376)
...+... ....+. +...|.+ +....+. ....+..+...+.+..... ..
T Consensus 172 ---~s~~~~a~~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~ 248 (376)
T d2vata1 172 ---QSGWCAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKK 248 (376)
T ss_dssp ---CCHHHHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC------------
T ss_pred ---cchHHHHHHHHHHHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhh
Confidence 1111111 111111 1111110 0000000 0001222221111100000 00
Q ss_pred -------------CCChHHHHHHHHH----HhccCCCchhHHHhhc--cCCCC-CcHHHHHHHHhcccCCCcEEEEEeCC
Q 017180 263 -------------NVTPGIVESRYAL----TKRKGARYVPAAFLTG--LLDPV-NSREEFLQLFADLEGKLPLLVVSTEG 322 (376)
Q Consensus 263 -------------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~i~~~~Pvlii~G~~ 322 (376)
......++.|... .....-...+..+... ..+.. ....++.+.+++| ++|+|+|.++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I--~a~~LvI~~~s 326 (376)
T d2vata1 249 EINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMI--TQPALIICARS 326 (376)
T ss_dssp ---------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTC--CSCEEEEECTT
T ss_pred cccccccccccccccchhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhC--CCCEEEEEeCc
Confidence 0001122222211 1111111111111111 11100 0111377789999 99999999999
Q ss_pred CCCCCHHHHHHHhcccCCceEEEeCCC--CCCCCCChHHHHHHHHHHHHh
Q 017180 323 SPRRSKAEMEALKGAKGVTKFVEVPGA--LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 323 D~~~~~~~~~~~~~~~~~~~~~~~~~~--H~~~~e~pe~~~~~i~~fl~~ 370 (376)
|.+.|++..+.+.+.++++++++++.- |..++.+++.+.+.|.+||++
T Consensus 327 D~lFPp~~~~e~a~~l~~a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 327 DGLYSFDEHVEMGRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp CSSSCHHHHHHHHHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred ccCcCHHHHHHHHHhcCCCeEEEECCCCCccccccCHHHHHHHHHHHHcC
Confidence 999999999999999999999999853 987777799999999999974
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.83 E-value=3.5e-23 Score=181.21 Aligned_cols=105 Identities=12% Similarity=0.094 Sum_probs=76.7
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHH-------HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRL-------VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNA 146 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~-------~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~ 146 (376)
+..+.|..-.+++ ++||||+||++ .+...|+. .+..+.++ ||+|+++|+||||+|..+...++.
T Consensus 45 ~~~v~~~~p~~~~---~~PvvllHG~~--~~~~~w~~~~~~~~~~~~~~~~~----Gy~V~~~D~~G~G~S~~~~~~~~~ 115 (318)
T d1qlwa_ 45 QMYVRYQIPQRAK---RYPITLIHGCC--LTGMTWETTPDGRMGWDEYFLRK----GYSTYVIDQSGRGRSATDISAINA 115 (318)
T ss_dssp CEEEEEEEETTCC---SSCEEEECCTT--CCGGGGSSCTTSCCCHHHHHHHT----TCCEEEEECTTSTTSCCCCHHHHH
T ss_pred eEEEEEECCCCCC---CCcEEEECCCC--CCcCccccCcccchhHHHHHHhC----CCEEEEecCCCCCCCCCccccCCH
Confidence 4555665544433 67899999999 88888864 46677776 999999999999999866544555
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCC
Q 017180 147 DVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNL 191 (376)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p 191 (376)
..+.+++.++++.+. ....+.+++|||+||.++..++...+
T Consensus 116 ~~~~~~~~~~l~~~~----~~~~~~~~~g~s~G~~~~~~~~~~~~ 156 (318)
T d1qlwa_ 116 VKLGKAPASSLPDLF----AAGHEAAWAIFRFGPRYPDAFKDTQF 156 (318)
T ss_dssp HHTTSSCGGGSCCCB----CCCHHHHHHHTTSSSBTTBCCTTCCS
T ss_pred HHHHHHHHHHHHHHh----hcccccccccccchhHHHHHHhhhcC
Confidence 556666666666654 12456777899999999888877543
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.83 E-value=1.8e-19 Score=150.80 Aligned_cols=115 Identities=11% Similarity=0.129 Sum_probs=78.6
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCH----HHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNA----DVM 149 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~----~~~ 149 (376)
|+.+.+..-+.+ +|.||++||++ ++...|..+++.|++. ||.|+++|+||||.|..+...... +..
T Consensus 12 g~~~~~~~p~~~----~~~vl~lHG~~--~~~~~~~~~~~~la~~----G~~V~~~D~~g~g~s~~~~~~~~~~~~~~~~ 81 (238)
T d1ufoa_ 12 GLSVLARIPEAP----KALLLALHGLQ--GSKEHILALLPGYAER----GFLLLAFDAPRHGEREGPPPSSKSPRYVEEV 81 (238)
T ss_dssp TEEEEEEEESSC----CEEEEEECCTT--CCHHHHHHTSTTTGGG----TEEEEECCCTTSTTSSCCCCCTTSTTHHHHH
T ss_pred CEEEEecCCCCC----CeEEEEeCCCC--CCHHHHHHHHHHHHHC----CCEEEEecCCCCCCCcccccccccchhhhhh
Confidence 666555444332 67899999999 9999999999999987 999999999999999844322211 111
Q ss_pred HH-------HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEec
Q 017180 150 EK-------FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVA 201 (376)
Q Consensus 150 ~~-------~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~ 201 (376)
.. ++..++..... ....++.++|+|+||.+++.++..+|.....+.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~G~S~Gg~~a~~~~~~~p~~~~~~~~~~ 137 (238)
T d1ufoa_ 82 YRVALGFKEEARRVAEEAER---RFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIG 137 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---HHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESC
T ss_pred hhhHHhHHHHHHHHhhhccc---cCCceEEEEEecccHHHHHHHHhcCcchhheeeeee
Confidence 11 12222211110 024689999999999999999999886444444433
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.83 E-value=6.1e-20 Score=155.99 Aligned_cols=225 Identities=15% Similarity=0.112 Sum_probs=139.7
Q ss_pred CCceeEEEEecccC-CCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC-----CCCC
Q 017180 72 ENSINIYYEKHERE-SPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK-----MDYN 145 (376)
Q Consensus 72 ~~g~~l~y~~~g~~-~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~-----~~~~ 145 (376)
.||.+|.....-+. .+++.|+||++||.+.......|...+..|+++ ||.|+++|+||+|.+.... ..+.
T Consensus 20 ~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~----G~~v~~~d~r~~~~~g~~~~~~~~~~~~ 95 (260)
T d2hu7a2 20 FDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAA----GFHVVMPNYRGSTGYGEEWRLKIIGDPC 95 (260)
T ss_dssp TTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHH----TCEEEEECCTTCSSSCHHHHHTTTTCTT
T ss_pred CCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCCccccHHHHHHHhh----ccccccceeeeccccccccccccccccc
Confidence 34666644332222 223357899999944335567787888889887 9999999999998775211 1111
Q ss_pred ---HHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhh
Q 017180 146 ---ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRY 222 (376)
Q Consensus 146 ---~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~ 222 (376)
.++..+.+..+.+.. ...++.++|+|+||.+++.++..+|+.+++++..+|... ..
T Consensus 96 ~~~~~D~~~~~~~l~~~~------~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~------------~~--- 154 (260)
T d2hu7a2 96 GGELEDVSAAARWARESG------LASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVD------------WE--- 154 (260)
T ss_dssp THHHHHHHHHHHHHHHTT------CEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCC------------HH---
T ss_pred hhhhhhhccccccccccc------ccceeeccccccccccccchhccCCcccccccccccchh------------hh---
Confidence 222333333333332 257789999999999999999999999999999887320 00
Q ss_pred HHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHH
Q 017180 223 GLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEF 302 (376)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (376)
. +... . .............. ..+... . .. .
T Consensus 155 ~--------------~~~~--~-~~~~~~~~~~~~~~-----~~~~~~----------------~-----~~-------~ 184 (260)
T d2hu7a2 155 E--------------MYEL--S-DAAFRNFIEQLTGG-----SREIMR----------------S-----RS-------P 184 (260)
T ss_dssp H--------------HHHT--C-CHHHHHHHHHHHCS-----CHHHHH----------------H-----TC-------G
T ss_pred h--------------hhcc--c-cccccccccccccc-----cccccc----------------c-----cc-------h
Confidence 0 0000 0 11111111100000 000000 0 00 1
Q ss_pred HHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhc----ccCCceEEEeCCC-CCC-CCCChHHHHHHHHHHHHhhcC
Q 017180 303 LQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKG----AKGVTKFVEVPGA-LLP-QEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 303 ~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~-H~~-~~e~pe~~~~~i~~fl~~~~~ 373 (376)
...++++ ++|+|++||++|..+|.+....+.+ ...++++++++++ |.. ..|+.+++.+.+.+||++.+.
T Consensus 185 ~~~~~~~--~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~~fl~~hl~ 259 (260)
T d2hu7a2 185 INHVDRI--KEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQRE 259 (260)
T ss_dssp GGCGGGC--CSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccc--CCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHHHHHHHHHHHHHhc
Confidence 1234567 8999999999999999888777743 3456789999998 975 446677888899999998753
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.83 E-value=3.8e-19 Score=155.18 Aligned_cols=276 Identities=14% Similarity=0.066 Sum_probs=163.8
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccch-------HhHHHH---HHHHhhhCCcceEEEEeCCCCCcCCC-CCC-
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTVE-------EWRLVA---QDIVQRVGKVNWRATIVDWPGLGYSD-RPK- 141 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~-------~~~~~~---~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~- 141 (376)
.++|.|+.+|.-+++....||+.|++.++.+.. -|..++ ..|.. ..|.||++|+.|.|.++ .|.
T Consensus 23 ~~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt----~kyfVI~~n~lG~~~gSs~p~s 98 (357)
T d2b61a1 23 YINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDT----DRYFFISSNVLGGCKGTTGPSS 98 (357)
T ss_dssp SEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEET----TTCEEEEECCTTCSSSSSCTTS
T ss_pred CceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCC----CceEEEEecccCCccccCCcCC
Confidence 578999999987665467888889998332221 244433 12222 26999999999988754 221
Q ss_pred -------------CCCCHHHHHHHHHHHHhCCCCCCCCCCCcE-EEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCC
Q 017180 142 -------------MDYNADVMEKFVVDLINAPDSPVSSSESDL-VIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGP 207 (376)
Q Consensus 142 -------------~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~-~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~ 207 (376)
...++.++++....++++|+ .+++ .|+|.||||+.|+++|.++|+.|+++|.++.....
T Consensus 99 ~~p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LG------I~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~- 171 (357)
T d2b61a1 99 INPQTGKPYGSQFPNIVVQDIVKVQKALLEHLG------ISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYF- 171 (357)
T ss_dssp BCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTT------CCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSC-
T ss_pred CCCCCCCCCCcccccchhHHHHHHHHHHHHHhC------cceEEEEecccHHHHHHHHHHHhhhHHHhhhccccccccc-
Confidence 25789999999999999998 6666 66799999999999999999999999999864210
Q ss_pred CCcccCCCCchhh-hhHHHH-hhhccCch-------------hhHHhhhh----hccHHHHHHHHHhcccCCCCC-CChH
Q 017180 208 LPIVFGRDSSMET-RYGLLR-GTLRAPGV-------------GWMMYNML----VSNEKAIQSQYKSHVYSNPDN-VTPG 267 (376)
Q Consensus 208 ~~~~~~~~~~~~~-~~~~~~-~~~~~~~~-------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~ 267 (376)
..... .....+ .+...+.. +....+.+ ......+...+.+....+... ....
T Consensus 172 --------s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~ 243 (357)
T d2b61a1 172 --------SAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYF 243 (357)
T ss_dssp --------CHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCB
T ss_pred --------chhHHHHHHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchh
Confidence 11111 011111 11111111 10000000 011222222222211111110 0111
Q ss_pred HHHHHHHH----HhccCCCchhHHHhhc--cCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc---
Q 017180 268 IVESRYAL----TKRKGARYVPAAFLTG--LLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK--- 338 (376)
Q Consensus 268 ~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~--- 338 (376)
.++.|... ....--...+...... ..+......++.+.+++| ++|+|+|..+.|.+.|++..+.+.+..
T Consensus 244 ~vesyL~~~g~kf~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I--~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~ 321 (357)
T d2b61a1 244 QVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRI--KARYTLVSVTTDQLFKPIDLYKSKQLLEQS 321 (357)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTC--CSEEEEEEETTCSSSCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhhCCHHHHHHHHHHhhhcccccccccHHHHHhhc--CCCEEEEEeCCccccCHHHHHHHHHHHHhc
Confidence 12222221 1111111111111111 111111223478889999 999999999999999988777665543
Q ss_pred -CCceEEEeCCC--CCCCCCChHHHHHHHHHHHHh
Q 017180 339 -GVTKFVEVPGA--LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 339 -~~~~~~~~~~~--H~~~~e~pe~~~~~i~~fl~~ 370 (376)
.++++++++.- |..++.+.+++.+.|.+||..
T Consensus 322 ~~~v~~~~I~S~~GHdafL~e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 322 GVDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAG 356 (357)
T ss_dssp TCEEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred CCCeEEEEECCCCCccccCcCHHHHHHHHHHHHcc
Confidence 46789999875 987777899999999999974
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.81 E-value=1.7e-19 Score=157.79 Aligned_cols=275 Identities=14% Similarity=0.033 Sum_probs=161.5
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCccc-----------hHhHHHH---HHHHhhhCCcceEEEEeCCCCCcCCCC
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVSTV-----------EEWRLVA---QDIVQRVGKVNWRATIVDWPGLGYSDR 139 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~-----------~~~~~~~---~~L~~~~~~~~~~Vi~~D~~G~G~S~~ 139 (376)
.++|.|+.+|..+.+....||+.|++.++.+. .-|..++ ..|.- ..|.||++|..|.|.|+.
T Consensus 26 ~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt----~~yfVI~~n~lG~~~~ss 101 (362)
T d2pl5a1 26 PVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDT----NQYFIICSNVIGGCKGSS 101 (362)
T ss_dssp SEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEET----TTCEEEEECCTTCSSSSS
T ss_pred CceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCc----cccEEEeeccccCccccc
Confidence 57899999998765445678888999833211 2243332 11222 269999999999998763
Q ss_pred CC---------------CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEE-EEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 140 PK---------------MDYNADVMEKFVVDLINAPDSPVSSSESDLV-IFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 140 ~~---------------~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
+. ...++.++++.-..++++++ .+++. |+|.||||+.|+++|.++|+.|+++|.++.+
T Consensus 102 ~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LG------I~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~s 175 (362)
T d2pl5a1 102 GPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLG------IEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMAST 175 (362)
T ss_dssp STTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTT------CSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCC
T ss_pred CccccccccccccCcCCccchhHHHHHHHHHHHHHhC------cCeeEEEeehhHHHHHHHHHHHhCchHhhhhcccccc
Confidence 21 23578889998889999998 56655 6799999999999999999999999999864
Q ss_pred CCCCCCcccCCCCchhh-hhHHHHh-hhccCchhhH------------Hhhh----hhccHHHHHHHHHhcccCCCCCCC
Q 017180 204 WAGPLPIVFGRDSSMET-RYGLLRG-TLRAPGVGWM------------MYNM----LVSNEKAIQSQYKSHVYSNPDNVT 265 (376)
Q Consensus 204 ~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~------------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
.. ...... .....+. +...+.+... ..+. .......++..+.+..........
T Consensus 176 a~---------~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~ 246 (362)
T d2pl5a1 176 AE---------HSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILST 246 (362)
T ss_dssp SB---------CCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTT
T ss_pred cc---------cCHHHHHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccch
Confidence 31 111111 1111111 1111111100 0000 001122222222221111000000
Q ss_pred hHHHHHHHHHHhcc-CCCc---hhHHHhh--ccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhcccC
Q 017180 266 PGIVESRYALTKRK-GARY---VPAAFLT--GLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAKG 339 (376)
Q Consensus 266 ~~~~~~~~~~~~~~-~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~ 339 (376)
...++.+....... ..+. .+..+.. ...+.. ...++.+.+++| ++|+|+|..+.|.+.|++..+.+.+.++
T Consensus 247 ~~~ve~yl~~~g~k~~~rfDan~yl~l~~a~~~~Di~-~~~~l~~aL~~I--~AkvLvi~~~sD~lFpp~~~~~~a~~l~ 323 (362)
T d2pl5a1 247 DFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLG-KGKELTAALSNA--TCRFLVVSYSSDWLYPPAQSREIVKSLE 323 (362)
T ss_dssp TTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCC-SHHHHHHHHTTC--CSEEEEEEETTCCSSCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHhhhhccccc-ccccHHHHHhhC--CCCEEEEEeCcccCcCHHHHHHHHHHHH
Confidence 00000000000000 0000 0111110 111111 234678889999 9999999999999999998888776554
Q ss_pred ----CceEEEeCCC--CCCCCCChHHHHHHHHHHHHh
Q 017180 340 ----VTKFVEVPGA--LLPQEEYPAMVAQELYQFLQQ 370 (376)
Q Consensus 340 ----~~~~~~~~~~--H~~~~e~pe~~~~~i~~fl~~ 370 (376)
++++++++.- |..++.+++++.+.|.+||+.
T Consensus 324 ~a~~~v~~~eI~S~~GHdaFL~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 324 AADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLEN 360 (362)
T ss_dssp HTTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHC
T ss_pred hCCCCeEEEEeCCCCCcchhccCHHHHHHHHHHHHcC
Confidence 4578888874 998888889999999999973
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.80 E-value=2e-18 Score=145.67 Aligned_cols=205 Identities=13% Similarity=0.132 Sum_probs=132.1
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+++|+|+||+.+.++...|..++..|.. .+.|+++|+||||.++.+ ..+++++++++.+.|.... ..+
T Consensus 42 ~~~l~c~~~~~~gg~~~~y~~La~~L~~-----~~~V~al~~pG~~~~e~~--~~s~~~~a~~~~~~i~~~~-----~~~ 109 (255)
T d1mo2a_ 42 EVTVICCAGTAAISGPHEFTRLAGALRG-----IAPVRAVPQPGYEEGEPL--PSSMAAVAAVQADAVIRTQ-----GDK 109 (255)
T ss_dssp SSEEEEECCCSSSCSGGGGHHHHHHHTT-----TCCEEEECCTTSSTTCCE--ESSHHHHHHHHHHHHHHTT-----SSS
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHhcCC-----CceEEEEeCCCcCCCCCC--CCCHHHHHHHHHHHHHHhC-----CCC
Confidence 6789999984322777899999999998 799999999999988643 3579999998876664432 378
Q ss_pred cEEEEecchHHHHHHHHHHh---CCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccH
Q 017180 170 DLVIFGGGHAATLTVRAAKK---NLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNE 246 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~---~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (376)
+++|+||||||.+|..+|.+ ....|..++++++.. |.. .... .
T Consensus 110 P~~L~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~----p~~------~~~~------------------------~ 155 (255)
T d1mo2a_ 110 PFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYP----PGH------QDAM------------------------N 155 (255)
T ss_dssp CEEEEECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSC----SSH------HHHH------------------------H
T ss_pred CEEEEEeCCcHHHHHHHHHhhHhcCCCccEEEEECCCC----CCC------ccch------------------------h
Confidence 89999999999999999984 355689999998632 100 0000 0
Q ss_pred HHHHHHHHhcccCC-CCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHH--hcccCCCcEEEEEeCCC
Q 017180 247 KAIQSQYKSHVYSN-PDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLF--ADLEGKLPLLVVSTEGS 323 (376)
Q Consensus 247 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~Pvlii~G~~D 323 (376)
.... ......... ....++..+....... + +...+ ..+ ++|++++.+++|
T Consensus 156 ~~~~-~~~~~~~~~~~~~~~~~~l~a~~~~~----------~--------------~~~~~~~~~~--~~p~l~v~a~~~ 208 (255)
T d1mo2a_ 156 AWLE-ELTATLFDRETVRMDDTRLTALGAYD----------R--------------LTGQWRPRET--GLPTLLVSAGEP 208 (255)
T ss_dssp HHHH-HHHTTCC----CCCCHHHHHHHHHHH----------H--------------HHHHCCCCCC--CCCEEEEECCSS
T ss_pred hHHH-HHHHHhhccccccCCHHHHHHHHHHH----------H--------------HHhcCCCccc--cceEEEeecCCC
Confidence 0001 011111100 0112222221111100 0 11111 235 899999999988
Q ss_pred CCCCHHHHHHHhccc-CCceEEEeCCCCC-CCCCChHHHHHHHHHHHH
Q 017180 324 PRRSKAEMEALKGAK-GVTKFVEVPGALL-PQEEYPAMVAQELYQFLQ 369 (376)
Q Consensus 324 ~~~~~~~~~~~~~~~-~~~~~~~~~~~H~-~~~e~pe~~~~~i~~fl~ 369 (376)
...... ..+.... ...+++.++++|+ ++.++++++++.|.+||.
T Consensus 209 ~~~~~~--~~w~~~~~~~~~~~~v~G~H~~ml~~~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 209 MGPWPD--DSWKPTWPFEHDTVAVPGDHFTMVQEHADAIARHIDAWLG 254 (255)
T ss_dssp SSCCTT--CCCCCCCCSSCEEEECCSCCSSCSSCCHHHHHHHHHHHHT
T ss_pred CCcchh--hHHHHhCCCCcEEEEECCCCcccccccHHHHHHHHHHHhC
Confidence 654322 2333333 4678999998888 555789999999999985
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.79 E-value=3.5e-18 Score=149.54 Aligned_cols=230 Identities=15% Similarity=0.030 Sum_probs=128.4
Q ss_pred CceeEEEEecccCC-CCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC---------
Q 017180 73 NSINIYYEKHERES-PDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM--------- 142 (376)
Q Consensus 73 ~g~~l~y~~~g~~~-~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~--------- 142 (376)
+|.+|+....-+.+ +++.|+||++||++ .+...|... ..+.++ ||.|+++|+||||.|..+..
T Consensus 64 dG~~l~~~l~~P~~~~~~~P~Vv~~hG~~--~~~~~~~~~-~~~a~~----G~~v~~~D~rG~G~s~~~~~~~~~~~~~~ 136 (322)
T d1vlqa_ 64 RGQRIKGWLLVPKLEEEKLPCVVQYIGYN--GGRGFPHDW-LFWPSM----GYICFVMDTRGQGSGWLKGDTPDYPEGPV 136 (322)
T ss_dssp GGCEEEEEEEEECCSCSSEEEEEECCCTT--CCCCCGGGG-CHHHHT----TCEEEEECCTTCCCSSSCCCCCBCCSSSB
T ss_pred CCcEEEEEEEeccCCCCCccEEEEecCCC--CCcCcHHHH-HHHHhC----CCEEEEeeccccCCCCCCccccccccccc
Confidence 47777654433221 22257889999998 666666444 355665 99999999999999964320
Q ss_pred ----------------CCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCC
Q 017180 143 ----------------DYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAG 206 (376)
Q Consensus 143 ----------------~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~ 206 (376)
.........|....++.+..+......++.++|+|+||.+++..+...+ ++++++...|....
T Consensus 137 ~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~v~~~~~~~~ 215 (322)
T d1vlqa_ 137 DPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCH 215 (322)
T ss_dssp CCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCC
T ss_pred cccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-CccEEEEeCCcccc
Confidence 0011112233333332221111112457999999999999998888765 68888877663210
Q ss_pred CCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhH
Q 017180 207 PLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPA 286 (376)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (376)
...... ...... ........... ....... .
T Consensus 216 --------------~~~~~~-~~~~~~------------~~~~~~~~~~~------~~~~~~~----------------~ 246 (322)
T d1vlqa_ 216 --------------FRRAVQ-LVDTHP------------YAEITNFLKTH------RDKEEIV----------------F 246 (322)
T ss_dssp --------------HHHHHH-HCCCTT------------HHHHHHHHHHC------TTCHHHH----------------H
T ss_pred --------------HHHHHh-hccccc------------hhhHHhhhhcC------cchhhhH----------------H
Confidence 000000 000000 00000000000 0000000 0
Q ss_pred HHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHhccc-CCceEEEeCCC-CCCCCCChHHHHHHH
Q 017180 287 AFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALKGAK-GVTKFVEVPGA-LLPQEEYPAMVAQEL 364 (376)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~-H~~~~e~pe~~~~~i 364 (376)
.... ..+ ....+.++ ++|+|+++|++|.++|++....+.+.. .+++++++|++ |... .+...+..
T Consensus 247 ~~~~-~~d-------~~~~a~~i--~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~~~~l~~~p~~~H~~~---~~~~~~~~ 313 (322)
T d1vlqa_ 247 RTLS-YFD-------GVNFAARA--KIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGG---GSFQAVEQ 313 (322)
T ss_dssp HHHH-TTC-------HHHHHTTC--CSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTT---HHHHHHHH
T ss_pred HHhh-hhh-------HHHHHhcC--CCCEEEEEeCCCCCcCHHHHHHHHHHCCCCeEEEEECCCCCCCc---cccCHHHH
Confidence 0000 001 34456778 999999999999999998888775544 36899999998 9532 22223445
Q ss_pred HHHHHhhc
Q 017180 365 YQFLQQTF 372 (376)
Q Consensus 365 ~~fl~~~~ 372 (376)
.+||++.+
T Consensus 314 ~~~l~~~l 321 (322)
T d1vlqa_ 314 VKFLKKLF 321 (322)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 68998876
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.73 E-value=2.2e-17 Score=139.73 Aligned_cols=174 Identities=12% Similarity=0.131 Sum_probs=123.5
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
-|.||++||++ ++...+..+++.|+++ ||.|+++|++|++..... ...++.+.+..+.+.......+...
T Consensus 52 ~P~Vv~~HG~~--g~~~~~~~~a~~lA~~----Gy~V~~~d~~~~~~~~~~----~~~d~~~~~~~l~~~~~~~~~vD~~ 121 (260)
T d1jfra_ 52 FGAVVISPGFT--AYQSSIAWLGPRLASQ----GFVVFTIDTNTTLDQPDS----RGRQLLSALDYLTQRSSVRTRVDAT 121 (260)
T ss_dssp EEEEEEECCTT--CCGGGTTTHHHHHHTT----TCEEEEECCSSTTCCHHH----HHHHHHHHHHHHHHTSTTGGGEEEE
T ss_pred ccEEEEECCCC--CCHHHHHHHHHHHHhC----CCEEEEEeeCCCcCCchh----hHHHHHHHHHHHHhhhhhhcccccc
Confidence 46899999999 8888888899999998 999999999998754310 1223333333444432211112356
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccHHHH
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAI 249 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (376)
++.++|||+||.+++.++...+ ++.++|.++|... . .
T Consensus 122 rI~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~------------------------------------~-~----- 158 (260)
T d1jfra_ 122 RLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNT------------------------------------D-K----- 158 (260)
T ss_dssp EEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCS------------------------------------C-C-----
T ss_pred ceEEEeccccchHHHHHHhhhc-cchhheeeecccc------------------------------------c-c-----
Confidence 7999999999999999998866 5778887776210 0 0
Q ss_pred HHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHH
Q 017180 250 QSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKA 329 (376)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~ 329 (376)
.+.++ ++|+|+++|++|.++|.+
T Consensus 159 -------------------------------------------------------~~~~~--~~P~l~i~G~~D~~vp~~ 181 (260)
T d1jfra_ 159 -------------------------------------------------------TWPEL--RTPTLVVGADGDTVAPVA 181 (260)
T ss_dssp -------------------------------------------------------CCTTC--CSCEEEEEETTCSSSCTT
T ss_pred -------------------------------------------------------ccccc--ccceeEEecCCCCCCCHH
Confidence 01123 789999999999999875
Q ss_pred H-HHHHhc---ccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 330 E-MEALKG---AKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 330 ~-~~~~~~---~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
. .+.+.+ .....++++++++ |+......+.+.+.+..||+..+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~i~ga~H~~~~~~~~~~~~~~~~wl~~~L~ 230 (260)
T d1jfra_ 182 THSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRFID 230 (260)
T ss_dssp TTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhcccCCCEEEEEECCCccCCCCCChHHHHHHHHHHHHHHhc
Confidence 4 333333 2335678999999 997766667789999999997754
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.73 E-value=1.1e-17 Score=136.07 Aligned_cols=172 Identities=11% Similarity=0.016 Sum_probs=120.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC---C---CCCCCHHHH---HHHHHH----H
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR---P---KMDYNADVM---EKFVVD----L 156 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~---~---~~~~~~~~~---~~~l~~----~ 156 (376)
.|+||++||++ ++...|..+...+.+ ++.|++++.+..+.... . ......++. .+++.+ +
T Consensus 14 ~P~vi~lHG~g--~~~~~~~~~~~~l~~-----~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 86 (202)
T d2h1ia1 14 KPVLLLLHGTG--GNELDLLPLAEIVDS-----EASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEA 86 (202)
T ss_dssp SCEEEEECCTT--CCTTTTHHHHHHHHT-----TSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCC--CCHHHHHHHHHHhcc-----CCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 78999999999 888999999999998 89999998665443221 0 111222222 222333 3
Q ss_pred HhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhh
Q 017180 157 INAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGW 236 (376)
Q Consensus 157 l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (376)
.++.. ....++.++|+|+||.+++.++.++|+.+.+++++++....
T Consensus 87 ~~~~~----~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~------------------------------ 132 (202)
T d2h1ia1 87 AKEYK----FDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPR------------------------------ 132 (202)
T ss_dssp HHHTT----CCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSC------------------------------
T ss_pred HHhcc----ccccceeeecccccchHHHHHHHhccccccceeeecCCCCc------------------------------
Confidence 33433 24678999999999999999999999999999998873100
Q ss_pred HHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEE
Q 017180 237 MMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLL 316 (376)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvl 316 (376)
. ... ..... ..|++
T Consensus 133 -------~------------~~~---------------------------------------------~~~~~--~~~~~ 146 (202)
T d2h1ia1 133 -------R------------GMQ---------------------------------------------LANLA--GKSVF 146 (202)
T ss_dssp -------S------------SCC---------------------------------------------CCCCT--TCEEE
T ss_pred -------c------------ccc---------------------------------------------ccccc--cchhh
Confidence 0 000 00011 67999
Q ss_pred EEEeCCCCCCCHHHHHHHhc----ccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhhc
Q 017180 317 VVSTEGSPRRSKAEMEALKG----AKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTF 372 (376)
Q Consensus 317 ii~G~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~~ 372 (376)
++||++|+++|.+..+++.+ ..-+++++.++++|.+ +.+..+.+.+||++.+
T Consensus 147 i~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~ggH~~----~~~~~~~~~~wl~k~f 202 (202)
T d2h1ia1 147 IAAGTNDPICSSAESEELKVLLENANANVTMHWENRGHQL----TMGEVEKAKEWYDKAF 202 (202)
T ss_dssp EEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEESSTTSC----CHHHHHHHHHHHHHHC
T ss_pred cccccCCCccCHHHHHHHHHHHHHCCCCEEEEEECCCCcC----CHHHHHHHHHHHHHhC
Confidence 99999999999887776643 3346788999877864 3456778999999864
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.73 E-value=2.1e-17 Score=139.85 Aligned_cols=229 Identities=10% Similarity=0.001 Sum_probs=132.4
Q ss_pred CceeEEEEecccCC---CCCCCcEEEecCCCCC---ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCC-----C
Q 017180 73 NSINIYYEKHERES---PDPSKNILMIPTISDV---STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRP-----K 141 (376)
Q Consensus 73 ~g~~l~y~~~g~~~---~~~~~~vvllHG~~~~---~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~-----~ 141 (376)
||.++.|...=+++ .+.-|.||++||.++. ............++++ ||.|+.+|+||+|.+... .
T Consensus 12 ~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~----g~~V~~~d~rg~~~~~~~~~~~~~ 87 (258)
T d2bgra2 12 NETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTE----NIIVASFDGRGSGYQGDKIMHAIN 87 (258)
T ss_dssp TTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTT----CCEEEEECCTTCSSSCHHHHGGGT
T ss_pred CCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcC----CcEEEeecccccCCcchHHHHhhh
Confidence 58888887754332 1112688999994211 2222222334456665 999999999998765411 1
Q ss_pred CCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhh
Q 017180 142 MDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETR 221 (376)
Q Consensus 142 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~ 221 (376)
..+...+ .+++.++++.+........+++.++|+|+||.+++.++..+|+.....+..++.....
T Consensus 88 ~~~~~~~-~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 152 (258)
T d2bgra2 88 RRLGTFE-VEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWE-------------- 152 (258)
T ss_dssp TCTTSHH-HHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGG--------------
T ss_pred hhhhhHH-HHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeecccccc--------------
Confidence 1222222 2233333333322222234579999999999999999999999888777766521000
Q ss_pred hHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHH
Q 017180 222 YGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREE 301 (376)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (376)
.. ...... ... .... .....+ .... . .
T Consensus 153 -------------------~~--~~~~~~-~~~--~~~~-~~~~~~---~~~~----------------~--~------- 179 (258)
T d2bgra2 153 -------------------YY--DSVYTE-RYM--GLPT-PEDNLD---HYRN----------------S--T------- 179 (258)
T ss_dssp -------------------GS--BHHHHH-HHH--CCCS-TTTTHH---HHHH----------------S--C-------
T ss_pred -------------------cc--cccccc-hhc--cccc-chhhHH---Hhhc----------------c--c-------
Confidence 00 000000 000 0000 000000 0000 0 0
Q ss_pred HHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHh----cccCCceEEEeCCC-CCC-CCCChHHHHHHHHHHHHhhcCC
Q 017180 302 FLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALK----GAKGVTKFVEVPGA-LLP-QEEYPAMVAQELYQFLQQTFEP 374 (376)
Q Consensus 302 ~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~~~~~-H~~-~~e~pe~~~~~i~~fl~~~~~~ 374 (376)
....+.++. ++|++++||++|..+|.+..+++. +...++++++++++ |.. ..+..+.+.+.+.+||++.++.
T Consensus 180 ~~~~~~~~~-~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 257 (258)
T d2bgra2 180 VMSRAENFK-QVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSL 257 (258)
T ss_dssp SGGGGGGGG-GSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccccccccc-cCChheeeecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHHHHHHHHHHHHHHhcC
Confidence 011123331 579999999999999987777664 34567899999998 974 3455778899999999999865
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.72 E-value=2.9e-17 Score=134.33 Aligned_cols=112 Identities=8% Similarity=0.015 Sum_probs=77.0
Q ss_pred EEecccCCCCCCCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC-----cCCC-CCCCCCCHHH----
Q 017180 79 YEKHERESPDPSKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL-----GYSD-RPKMDYNADV---- 148 (376)
Q Consensus 79 y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~-----G~S~-~~~~~~~~~~---- 148 (376)
|+..+.+++ ..|+||++||++ ++...|..+...|.+ ++.+++++.+.- +... ........+.
T Consensus 13 ~~~~~~~~~-~~p~vv~lHG~g--~~~~~~~~l~~~l~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (209)
T d3b5ea1 13 YRLLGAGKE-SRECLFLLHGSG--VDETTLVPLARRIAP-----TATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAE 84 (209)
T ss_dssp EEEESTTSS-CCCEEEEECCTT--BCTTTTHHHHHHHCT-----TSEEEEECCSEEETTEEESSCEEETTEECHHHHHHH
T ss_pred eEecCCCCC-CCCEEEEEcCCC--CCHHHHHHHHHHhcc-----CcEEEeeccCcCcccCccccccCCccccchhhHHHH
Confidence 444443322 268999999999 888899999999988 799999876421 1111 0111122222
Q ss_pred ---HHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 149 ---MEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 149 ---~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
+.+.|..+.++.+ ...++++++|||+||.+++.++.++|++++++++++|
T Consensus 85 ~~~l~~~l~~~~~~~~----id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g 137 (209)
T d3b5ea1 85 TAAFAAFTNEAAKRHG----LNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRP 137 (209)
T ss_dssp HHHHHHHHHHHHHHHT----CCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESC
T ss_pred HHHHHHHHHHHHHHhC----cccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCC
Confidence 2223333444333 2367899999999999999999999999999999987
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.72 E-value=4.9e-16 Score=127.62 Aligned_cols=180 Identities=11% Similarity=0.099 Sum_probs=121.3
Q ss_pred CCcEEEecCC---CCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCC
Q 017180 90 SKNILMIPTI---SDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSS 166 (376)
Q Consensus 90 ~~~vvllHG~---~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 166 (376)
.+.+|++||. +++.+......++..|.+. ||.|+.+|+||.|.|+... +....+. +|..+.++.+..+. .
T Consensus 24 ~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~----G~~~lrfn~RG~g~S~G~~-~~~~~e~-~d~~aa~~~~~~~~-~ 96 (218)
T d2i3da1 24 APIAIILHPHPQFGGTMNNQIVYQLFYLFQKR----GFTTLRFNFRSIGRSQGEF-DHGAGEL-SDAASALDWVQSLH-P 96 (218)
T ss_dssp CCEEEEECCCGGGTCCTTSHHHHHHHHHHHHT----TCEEEEECCTTSTTCCSCC-CSSHHHH-HHHHHHHHHHHHHC-T
T ss_pred CCEEEEECCCcCcCCcCCcHHHHHHHHHHHhc----CeeEEEEecCccCCCcccc-ccchhHH-HHHHHHHhhhhccc-c
Confidence 5688999984 4223344455677778876 9999999999999998432 2222222 23322222211000 1
Q ss_pred CCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhhhhhccH
Q 017180 167 SESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYNMLVSNE 246 (376)
Q Consensus 167 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (376)
...+++++|+|+||.+++.++.+.+ .+.+++++.|... .. .
T Consensus 97 ~~~~~~~~g~S~G~~~a~~~a~~~~-~~~~~~~~~~~~~-----------------------------------~~-~-- 137 (218)
T d2i3da1 97 DSKSCWVAGYSFGAWIGMQLLMRRP-EIEGFMSIAPQPN-----------------------------------TY-D-- 137 (218)
T ss_dssp TCCCEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTT-----------------------------------TS-C--
T ss_pred cccceeEEeeehHHHHHHHHHHhhc-cccceeecccccc-----------------------------------cc-c--
Confidence 2567999999999999999988765 4567777766210 00 0
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEeCCCCCC
Q 017180 247 KAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVSTEGSPRR 326 (376)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~ 326 (376)
.. .+... .+|+++++|++|.++
T Consensus 138 -----------~~---------------------------------------------~~~~~--~~p~l~i~g~~D~~~ 159 (218)
T d2i3da1 138 -----------FS---------------------------------------------FLAPC--PSSGLIINGDADKVA 159 (218)
T ss_dssp -----------CT---------------------------------------------TCTTC--CSCEEEEEETTCSSS
T ss_pred -----------hh---------------------------------------------hcccc--CCCceeeecccceec
Confidence 00 01122 679999999999999
Q ss_pred CHHHHHHHhc-----ccCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcCC
Q 017180 327 SKAEMEALKG-----AKGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFEP 374 (376)
Q Consensus 327 ~~~~~~~~~~-----~~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~~ 374 (376)
+......+.+ .....++++++++ |+.. .+-+++.+.|.+||++.+..
T Consensus 160 ~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~-g~~~~l~~~v~~~l~~~l~~ 212 (218)
T d2i3da1 160 PEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDELMGECEDYLDRRLNG 212 (218)
T ss_dssp CHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHhhccCCCccEEEeCCCCCCCc-CCHHHHHHHHHHHHHHhcCC
Confidence 9887776632 2345689999999 9865 67789999999999988754
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=1.9e-16 Score=131.22 Aligned_cols=182 Identities=11% Similarity=0.107 Sum_probs=119.3
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCC--------------C-CCCCCCC---HHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYS--------------D-RPKMDYN---ADVMEK 151 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S--------------~-~~~~~~~---~~~~~~ 151 (376)
.++|||+||+| ++...|..++..+... ++.++++|-|.+..+ . ....... ++...+
T Consensus 21 ~~~VI~lHG~G--~~~~~~~~~~~~l~~~----~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~ 94 (229)
T d1fj2a_ 21 TAAVIFLHGLG--DTGHGWAEAFAGIRSS----HIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAE 94 (229)
T ss_dssp SEEEEEECCSS--SCHHHHHHHHHTTCCT----TEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHH
T ss_pred CCEEEEEcCCC--CCHHHHHHHHHHhcCC----CCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHH
Confidence 56899999999 8988898777777654 899999987643211 0 0111111 233334
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhcc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRA 231 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (376)
.+..+++..... ....++++++|+|+||.+++.++.++|+++.++|.+++.. +.
T Consensus 95 ~l~~li~~~~~~-~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~l----p~--------------------- 148 (229)
T d1fj2a_ 95 NIKALIDQEVKN-GIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWL----PL--------------------- 148 (229)
T ss_dssp HHHHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCC----TT---------------------
T ss_pred HHHHHhhhhhhc-CCCccceeeeecccchHHHHHHHHhhccccCccccccccc----cc---------------------
Confidence 444444432100 0236789999999999999999999999999999987621 00
Q ss_pred CchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccC
Q 017180 232 PGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEG 311 (376)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 311 (376)
... +...... ....
T Consensus 149 -------~~~-----------~~~~~~~----------------------------------------------~~~~-- 162 (229)
T d1fj2a_ 149 -------RAS-----------FPQGPIG----------------------------------------------GANR-- 162 (229)
T ss_dssp -------GGG-----------SCSSCCC----------------------------------------------STTT--
T ss_pred -------ccc-----------ccccccc----------------------------------------------cccc--
Confidence 000 0000000 0011
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHh----cc--cCCceEEEeCCC-CCCCCCChHHHHHHHHHHHHhhcC
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALK----GA--KGVTKFVEVPGA-LLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~----~~--~~~~~~~~~~~~-H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
++|++++||++|.++|.+..++.. +. ..++++++++++ |... ++ ..+.+.+||++.+.
T Consensus 163 ~~Pvli~hG~~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~---~~-~~~~~~~wL~~~Lp 227 (229)
T d1fj2a_ 163 DISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSC---QQ-EMMDVKQFIDKLLP 227 (229)
T ss_dssp TCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCC---HH-HHHHHHHHHHHHSC
T ss_pred cCceeEEEcCCCCeeCHHHHHHHHHHHHhcCCCCceEEEEeCCCCCccC---HH-HHHHHHHHHHhHCc
Confidence 679999999999999988776543 21 346789999997 9653 33 45678999999874
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.69 E-value=1.3e-17 Score=145.31 Aligned_cols=100 Identities=10% Similarity=0.237 Sum_probs=87.9
Q ss_pred CCcEEEecCCCCCccch------HhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCC
Q 017180 90 SKNILMIPTISDVSTVE------EWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSP 163 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~------~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~ 163 (376)
+.||||+||++ ++.. .|..+.+.|.+. ||+|+++|+||||.|+.+. ...+++++++.++++.++
T Consensus 8 k~PvvlvHG~~--g~~~~~~~~~~~~~~~~~L~~~----G~~V~~~~~~g~g~s~~~~--~~~~~l~~~i~~~~~~~~-- 77 (319)
T d1cvla_ 8 RYPVILVHGLA--GTDKFANVVDYWYGIQSDLQSH----GAKVYVANLSGFQSDDGPN--GRGEQLLAYVKQVLAATG-- 77 (319)
T ss_dssp SSCEEEECCTT--BSSEETTTEESSTTHHHHHHHT----TCCEEECCCBCSSCTTSTT--SHHHHHHHHHHHHHHHHC--
T ss_pred CCCEEEECCCC--CCcchhhhhhhHHHHHHHHHHC----CCEEEEecCCCCCCCCCCc--ccHHHHHHHHHHHHHHhC--
Confidence 66899999998 5433 488899999997 8999999999999987543 457888999999999987
Q ss_pred CCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 164 VSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 164 ~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.+++++|||||||.++..++.++|++|+++|++++.
T Consensus 78 ----~~~v~lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p 113 (319)
T d1cvla_ 78 ----ATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTP 113 (319)
T ss_dssp ----CSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ----CCCEEEEeccccHHHHHHHHHHCccccceEEEECCC
Confidence 789999999999999999999999999999999874
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.69 E-value=5.8e-16 Score=131.12 Aligned_cols=105 Identities=9% Similarity=0.032 Sum_probs=72.3
Q ss_pred EEEEecccCCCCCCCcEEEecCCC---CCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHH
Q 017180 77 IYYEKHERESPDPSKNILMIPTIS---DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFV 153 (376)
Q Consensus 77 l~y~~~g~~~~~~~~~vvllHG~~---~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l 153 (376)
+.+...+..+ +|+||++||.+ ...+...|..+.+.|.+...+.||.|+++|+|..+... .....++..+.+
T Consensus 21 ~~~~~~~~~~---~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~---~~~~~~d~~~~~ 94 (263)
T d1vkha_ 21 LTFQEISQNT---REAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEIT---NPRNLYDAVSNI 94 (263)
T ss_dssp EEEECCCTTC---CEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSC---TTHHHHHHHHHH
T ss_pred EEeccCCCCC---CcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchh---hhHHHHhhhhhh
Confidence 4455544433 78999999953 11345566666666655444449999999999776543 223456666666
Q ss_pred HHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCC
Q 017180 154 VDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVK 193 (376)
Q Consensus 154 ~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~ 193 (376)
..+.+... ..+++|+|||+||.+++.++...++.
T Consensus 95 ~~l~~~~~------~~~i~l~G~S~Gg~lal~~a~~~~~~ 128 (263)
T d1vkha_ 95 TRLVKEKG------LTNINMVGHSVGATFIWQILAALKDP 128 (263)
T ss_dssp HHHHHHHT------CCCEEEEEETHHHHHHHHHHTGGGSC
T ss_pred hccccccc------ccceeeeccCcHHHHHHHHHHhccCc
Confidence 67777654 67899999999999999998865543
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.67 E-value=3.9e-16 Score=126.92 Aligned_cols=173 Identities=12% Similarity=0.033 Sum_probs=120.8
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC-C-C----CCCCHHHH---HHHHHHHHhCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR-P-K----MDYNADVM---EKFVVDLINAP 160 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~-~-~----~~~~~~~~---~~~l~~~l~~l 160 (376)
.|+||++||++ ++...|..+.+.|.+ ++.|++++.+..+.+.. . . .....++. .+.+.++++..
T Consensus 17 ~P~vi~lHG~G--~~~~~~~~~~~~l~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 89 (203)
T d2r8ba1 17 APLFVLLHGTG--GDENQFFDFGARLLP-----QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKAN 89 (203)
T ss_dssp SCEEEEECCTT--CCHHHHHHHHHHHST-----TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCC--CCHHHHHHHHHHhcc-----CCeEEEeccccccccccccccccCccccchhHHHHHHHHHHHHHHHh
Confidence 78999999999 888999999999987 79999998776654431 1 1 12223332 33333444321
Q ss_pred CCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCchhhHHhh
Q 017180 161 DSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGVGWMMYN 240 (376)
Q Consensus 161 ~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (376)
... ...++++++|+|+||.+++.++..+|+.+.+++++++.... .
T Consensus 90 ~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~---------------------------------~ 134 (203)
T d2r8ba1 90 REH--YQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPF---------------------------------E 134 (203)
T ss_dssp HHH--HTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCS---------------------------------C
T ss_pred hhc--CCCceEEEEEecCHHHHHHHHHHhhhhcccceeeecccccc---------------------------------c
Confidence 100 02578999999999999999999999999999999873100 0
Q ss_pred hhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCcEEEEEe
Q 017180 241 MLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLPLLVVST 320 (376)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Pvlii~G 320 (376)
.... .... ..|++++||
T Consensus 135 ---------------~~~~----------------------------------------------~~~~--~~~~~i~hG 151 (203)
T d2r8ba1 135 ---------------PKIS----------------------------------------------PAKP--TRRVLITAG 151 (203)
T ss_dssp ---------------CCCC----------------------------------------------CCCT--TCEEEEEEE
T ss_pred ---------------cccc----------------------------------------------cccc--cchhhcccc
Confidence 0000 0011 669999999
Q ss_pred CCCCCCCHHHHHHHhcc----cCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhh
Q 017180 321 EGSPRRSKAEMEALKGA----KGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 321 ~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~ 371 (376)
++|+++|.+..+++.+. .-++++++++++|... ++ ..+.+.+||.+.
T Consensus 152 ~~D~~vp~~~~~~~~~~L~~~g~~v~~~~~~ggH~~~---~~-~~~~~~~wl~~~ 202 (203)
T d2r8ba1 152 ERDPICPVQLTKALEESLKAQGGTVETVWHPGGHEIR---SG-EIDAVRGFLAAY 202 (203)
T ss_dssp TTCTTSCHHHHHHHHHHHHHHSSEEEEEEESSCSSCC---HH-HHHHHHHHHGGG
T ss_pred CCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCcCC---HH-HHHHHHHHHHhc
Confidence 99999999888777543 3467889998779743 34 557789999864
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=2.2e-16 Score=133.49 Aligned_cols=223 Identities=9% Similarity=0.064 Sum_probs=124.3
Q ss_pred CceeEEEEecccCC---CCCCCcEEEecCCCCCc-cchHh--HHHHHHHHhhhCCcceEEEEeCCCCCcCCCC-----CC
Q 017180 73 NSINIYYEKHERES---PDPSKNILMIPTISDVS-TVEEW--RLVAQDIVQRVGKVNWRATIVDWPGLGYSDR-----PK 141 (376)
Q Consensus 73 ~g~~l~y~~~g~~~---~~~~~~vvllHG~~~~~-~~~~~--~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~-----~~ 141 (376)
||.+|.....-+.+ .++-|.||++||.+... ....| ......|+++ ||-|+++|+||.+.+.. ..
T Consensus 11 dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~----G~~vv~~d~rGs~~~g~~~~~~~~ 86 (258)
T d1xfda2 11 DDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSH----GAVVVKCDGRGSGFQGTKLLHEVR 86 (258)
T ss_dssp TTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTT----CCEEECCCCTTCSSSHHHHHHTTT
T ss_pred CCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcCcchHHHHHhcC----CcEEEEeccccccccchhHhhhhh
Confidence 47777654332221 11136888899963111 12223 2234567886 99999999998653321 11
Q ss_pred CCCC---HHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCC----CcceEEEeccCCCCCCCcccCC
Q 017180 142 MDYN---ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLV----KPTAIAAVAPTWAGPLPIVFGR 214 (376)
Q Consensus 142 ~~~~---~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~----~v~~lvl~~p~~~~~~~~~~~~ 214 (376)
..+. .++..+.+..+++... +..+++.++|+|+||.+++.++...++ .+...+.+++.....
T Consensus 87 ~~~g~~~~~d~~~~i~~l~~~~~----id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 155 (258)
T d1xfda2 87 RRLGLLEEKDQMEAVRTMLKEQY----IDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFK------- 155 (258)
T ss_dssp TCTTTHHHHHHHHHHHHHHSSSS----EEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTT-------
T ss_pred ccchhHHHHHHHHhhhhhccccc----ccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeee-------
Confidence 1222 2333333444444332 235679999999999999988765443 345555555421000
Q ss_pred CCchhhhhHHHHhhhccCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCC
Q 017180 215 DSSMETRYGLLRGTLRAPGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLD 294 (376)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (376)
. ........... ....+..... .
T Consensus 156 --------------------------~--~~~~~~~~~~~-~~~~~~~~~~----------------------------~ 178 (258)
T d1xfda2 156 --------------------------L--YASAFSERYLG-LHGLDNRAYE----------------------------M 178 (258)
T ss_dssp --------------------------S--SBHHHHHHHHC-CCSSCCSSTT----------------------------T
T ss_pred --------------------------c--ccccccccccc-ccccchHHhh----------------------------c
Confidence 0 00011110110 0000000000 0
Q ss_pred CCCcHHHHHHHHhcccCCCcEEEEEeCCCCCCCHHHHHHHh----cccCCceEEEeCCC-CCCCC-CChHHHHHHHHHHH
Q 017180 295 PVNSREEFLQLFADLEGKLPLLVVSTEGSPRRSKAEMEALK----GAKGVTKFVEVPGA-LLPQE-EYPAMVAQELYQFL 368 (376)
Q Consensus 295 ~~~~~~~~~~~~~~i~~~~Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~~~~~-H~~~~-e~pe~~~~~i~~fl 368 (376)
. . ....+..+. ++|+|++||+.|..+|.+...++. +...+.+++++|++ |.... +....+.+.+.+||
T Consensus 179 ~--s---~~~~~~~~~-~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~~f~ 252 (258)
T d1xfda2 179 T--K---VAHRVSALE-EQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFF 252 (258)
T ss_dssp T--C---THHHHTSCC-SCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHH
T ss_pred c--c---hhhhhhhhh-cccccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHHHHHHHHH
Confidence 0 0 122233332 689999999999999987776653 44557899999999 98543 45566789999999
Q ss_pred HhhcC
Q 017180 369 QQTFE 373 (376)
Q Consensus 369 ~~~~~ 373 (376)
++.++
T Consensus 253 ~~~~~ 257 (258)
T d1xfda2 253 VECFR 257 (258)
T ss_dssp TTTTC
T ss_pred HHhhC
Confidence 99875
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.65 E-value=2.7e-16 Score=134.74 Aligned_cols=99 Identities=17% Similarity=0.146 Sum_probs=81.9
Q ss_pred CCcEEEecCCCCCccchH--hHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEE--WRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~--~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
++||||+||++ .+... |..+.+.|.+. ||+|+.+|+||+|.++.. .+.+++++.+..+++..+
T Consensus 31 ~~PVvlvHG~~--~~~~~~~~~~~~~~L~~~----Gy~v~~~d~~g~g~~d~~---~sae~la~~i~~v~~~~g------ 95 (317)
T d1tcaa_ 31 SKPILLVPGTG--TTGPQSFDSNWIPLSTQL----GYTPCWISPPPFMLNDTQ---VNTEYMVNAITALYAGSG------ 95 (317)
T ss_dssp SSEEEEECCTT--CCHHHHHTTTHHHHHHTT----TCEEEEECCTTTTCSCHH---HHHHHHHHHHHHHHHHTT------
T ss_pred CCcEEEECCCC--CCCcchhHHHHHHHHHhC----CCeEEEecCCCCCCCchH---hHHHHHHHHHHHHHHhcc------
Confidence 56899999999 65544 66788999987 999999999999988632 345667777777777776
Q ss_pred CCcEEEEecchHHHHHHHHHHhCC---CCcceEEEeccC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNL---VKPTAIAAVAPT 203 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p---~~v~~lvl~~p~ 203 (376)
.+++.||||||||.++..++..+| ++|+.+|.+++.
T Consensus 96 ~~kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~ 134 (317)
T d1tcaa_ 96 NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPD 134 (317)
T ss_dssp SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCC
T ss_pred CCceEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCC
Confidence 688999999999999999999887 469999999884
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.62 E-value=1e-14 Score=120.95 Aligned_cols=178 Identities=12% Similarity=0.027 Sum_probs=117.6
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC---------------CCCCHHHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK---------------MDYNADVMEKFVV 154 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~---------------~~~~~~~~~~~l~ 154 (376)
.|.||++|+.. +.....+..+..|++. ||.|+++|+.|.+...... ...+.+....|+.
T Consensus 28 ~P~vl~~h~~~--G~~~~~~~~a~~lA~~----Gy~vl~pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 101 (233)
T d1dina_ 28 APVIVIAQEIF--GVNAFMRETVSWLVDQ----GYAAVCPDLYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLE 101 (233)
T ss_dssp EEEEEEECCTT--BSCHHHHHHHHHHHHT----TCEEEEECGGGGTSTTCBCCTTSHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred ceEEEEeCCCC--CCCHHHHHHHHHHHhc----CCcceeeeeccCCCcCcccChHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 78899999766 5555667778899987 9999999997766543211 1234444455555
Q ss_pred HHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhccCch
Q 017180 155 DLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLRAPGV 234 (376)
Q Consensus 155 ~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (376)
..++.+.... ....++.++|+|+||.+++.++.+. .+.+.+...+..
T Consensus 102 aa~~~l~~~~-~~~~~i~~~G~s~Gg~~a~~~a~~~--~~~~~~~~~~~~------------------------------ 148 (233)
T d1dina_ 102 AAIRYARHQP-YSNGKVGLVGYCLGGALAFLVAAKG--YVDRAVGYYGVG------------------------------ 148 (233)
T ss_dssp HHHHHHHTST-TEEEEEEEEEETHHHHHHHHHHHHT--CSSEEEEESCSC------------------------------
T ss_pred HHHHHHHhCC-CCCCceEEEEecccccceeeccccc--ccceeccccccc------------------------------
Confidence 5544432111 1245799999999999999988763 344555443310
Q ss_pred hhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhcccCCCc
Q 017180 235 GWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLEGKLP 314 (376)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~P 314 (376)
.. . ..+...++ ++|
T Consensus 149 ----~~---~---------------------------------------------------------~~~~~~~i--~~P 162 (233)
T d1dina_ 149 ----LE---K---------------------------------------------------------QLNKVPEV--KHP 162 (233)
T ss_dssp ----GG---G---------------------------------------------------------GGGGGGGC--CSC
T ss_pred ----cc---c---------------------------------------------------------chhhhhcc--CCc
Confidence 00 0 00122345 889
Q ss_pred EEEEEeCCCCCCCHHHHHHHh---cccCCceEEEeCCC-CCCCCCCh--------HHHHHHHHHHHHhhc
Q 017180 315 LLVVSTEGSPRRSKAEMEALK---GAKGVTKFVEVPGA-LLPQEEYP--------AMVAQELYQFLQQTF 372 (376)
Q Consensus 315 vlii~G~~D~~~~~~~~~~~~---~~~~~~~~~~~~~~-H~~~~e~p--------e~~~~~i~~fl~~~~ 372 (376)
+|+++|++|+.+|.+..+.+. +..++.+++++|++ |....+.. ++-.+.+.+||..+.
T Consensus 163 vl~~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~~~ 232 (233)
T d1dina_ 163 ALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTSSSGYVASAAALANERTLDFLAPLQ 232 (233)
T ss_dssp EEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGC
T ss_pred ceeeecccccCCCHHHHHHHHHHHhcCCCEEEEEECCCCcCCCCCCCccCCHHHHHHHHHHHHHHHHcCc
Confidence 999999999999988877664 33457899999999 97554322 233577778998764
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.62 E-value=1.8e-16 Score=135.22 Aligned_cols=97 Identities=9% Similarity=0.126 Sum_probs=84.2
Q ss_pred CCcEEEecCCCCCccc-----hHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCC
Q 017180 90 SKNILMIPTISDVSTV-----EEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPV 164 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~-----~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~ 164 (376)
+.||||+||++ ++. ..|..+.+.|.+. ||+|+++|++|+|.++ ...+++.++|.+++++.+
T Consensus 7 ~~PvvlvHG~~--g~~~~~~~~yw~~i~~~L~~~----G~~v~~~~~~~~~~~~-----~~a~~l~~~i~~~~~~~g--- 72 (285)
T d1ex9a_ 7 KYPIVLAHGML--GFDNILGVDYWFGIPSALRRD----GAQVYVTEVSQLDTSE-----VRGEQLLQQVEEIVALSG--- 72 (285)
T ss_dssp SSCEEEECCTT--CCSEETTEESSTTHHHHHHHT----TCCEEEECCCSSSCHH-----HHHHHHHHHHHHHHHHHC---
T ss_pred CCCEEEECCCC--CCccccchhhHHHHHHHHHhC----CCEEEEeCCCCCCCcH-----HHHHHHHHHHHHHHHHcC---
Confidence 66899999998 443 2488899999997 9999999999999654 346778888999998887
Q ss_pred CCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 165 SSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 165 ~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.+++++|||||||.++..++.++|++|+++|.++++
T Consensus 73 ---~~~v~ligHS~GG~~~r~~~~~~p~~v~~lv~i~tP 108 (285)
T d1ex9a_ 73 ---QPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAP 108 (285)
T ss_dssp ---CSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ---CCeEEEEEECccHHHHHHHHHHCCccceeEEEECCC
Confidence 788999999999999999999999999999999863
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.57 E-value=2.1e-13 Score=111.69 Aligned_cols=182 Identities=14% Similarity=0.108 Sum_probs=113.7
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCC--------cCC------C-CCCCCCCHH---HHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGL--------GYS------D-RPKMDYNAD---VMEK 151 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~--------G~S------~-~~~~~~~~~---~~~~ 151 (376)
+++|||+||+| ++...|..+++.|.+... ++.+++++-|.. +.. . .+......+ ...+
T Consensus 14 ~~~Vi~lHG~G--~~~~~~~~~~~~l~~~~~--~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 89 (218)
T d1auoa_ 14 DACVIWLHGLG--ADRYDFMPVAEALQESLL--TTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAK 89 (218)
T ss_dssp SEEEEEECCTT--CCTTTTHHHHHHHHTTCT--TEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHH
T ss_pred CeEEEEEcCCC--CChhhHHHHHHHHHHhCC--CcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHHHHH
Confidence 56899999999 888899888888876422 577887765421 100 0 111112222 2222
Q ss_pred HHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh-CCCCcceEEEeccCCCCCCCcccCCCCchhhhhHHHHhhhc
Q 017180 152 FVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKK-NLVKPTAIAAVAPTWAGPLPIVFGRDSSMETRYGLLRGTLR 230 (376)
Q Consensus 152 ~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~-~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (376)
.+.++++... ......++++++|+|+||.+++.++.. .+..+.+++.+++.. +..
T Consensus 90 ~v~~li~~~~-~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~----~~~------------------- 145 (218)
T d1auoa_ 90 MVTDLIEAQK-RTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYA----PTF------------------- 145 (218)
T ss_dssp HHHHHHHHHH-HTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCC----TTC-------------------
T ss_pred HHHHHHHHHH-HhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccC----ccc-------------------
Confidence 3344443211 001236789999999999999998764 566788888887521 000
Q ss_pred cCchhhHHhhhhhccHHHHHHHHHhcccCCCCCCChHHHHHHHHHHhccCCCchhHHHhhccCCCCCcHHHHHHHHhccc
Q 017180 231 APGVGWMMYNMLVSNEKAIQSQYKSHVYSNPDNVTPGIVESRYALTKRKGARYVPAAFLTGLLDPVNSREEFLQLFADLE 310 (376)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 310 (376)
.... . . . . ...
T Consensus 146 --------~~~~-~-------------~---------------------------------------~---~--~~~--- 156 (218)
T d1auoa_ 146 --------GDEL-E-------------L---------------------------------------S---A--SQQ--- 156 (218)
T ss_dssp --------CTTC-C-------------C---------------------------------------C---H--HHH---
T ss_pred --------cccc-c-------------c---------------------------------------c---h--hcc---
Confidence 0000 0 0 0 0 011
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHh----cccCCceEEEeCCCCCCCCCChHHHHHHHHHHHHhhcC
Q 017180 311 GKLPLLVVSTEGSPRRSKAEMEALK----GAKGVTKFVEVPGALLPQEEYPAMVAQELYQFLQQTFE 373 (376)
Q Consensus 311 ~~~Pvlii~G~~D~~~~~~~~~~~~----~~~~~~~~~~~~~~H~~~~e~pe~~~~~i~~fl~~~~~ 373 (376)
+.|++++||++|.++|.+..+++. +...++++++++++|... ++..+.|.+||.+.++
T Consensus 157 -~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~gH~i~----~~~~~~i~~wl~~~lg 218 (218)
T d1auoa_ 157 -RIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYPMGHEVL----PQEIHDIGAWLAARLG 218 (218)
T ss_dssp -TCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESCSSSCC----HHHHHHHHHHHHHHHC
T ss_pred -CCCEEEEecCCCCccCHHHHHHHHHHHHHCCCCEEEEEECCCCccC----HHHHHHHHHHHHHhcC
Confidence 669999999999999988776654 334478999998659653 3456779999988653
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.50 E-value=1.3e-12 Score=114.97 Aligned_cols=123 Identities=13% Similarity=0.078 Sum_probs=84.9
Q ss_pred ceeEEEEecccCCCCCCCcEEEecCCCCCc--cchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCC-CCCCCCHHHHH
Q 017180 74 SINIYYEKHERESPDPSKNILMIPTISDVS--TVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDR-PKMDYNADVME 150 (376)
Q Consensus 74 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~--~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~-~~~~~~~~~~~ 150 (376)
|++|.....-+...++-|+||+.||++... ....+......|+++ ||.|+++|.||+|.|+. .......+...
T Consensus 15 Gv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~----GY~vv~~d~RG~g~S~G~~~~~~~~~~d~ 90 (347)
T d1ju3a2 15 GVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRD----GYAVVIQDTRGLFASEGEFVPHVDDEADA 90 (347)
T ss_dssp SCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHT----TCEEEEEECTTSTTCCSCCCTTTTHHHHH
T ss_pred CCEEEEEEEEcCCCCCEEEEEEEcCCCCccccCcCcccHHHHHHHHC----CCEEEEEeeCCccccCCccccccchhhhH
Confidence 777766555443333356788889987211 112233345677776 99999999999999994 33333444444
Q ss_pred HHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 151 KFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 151 ~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
.|+.+++.... ....+|.++|+|.||.+++.+|...|..+++++...+..
T Consensus 91 ~d~i~w~~~q~----~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~ 140 (347)
T d1ju3a2 91 EDTLSWILEQA----WCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASA 140 (347)
T ss_dssp HHHHHHHHHST----TEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCS
T ss_pred HHHHHHHHhhc----cCCcceEeeeccccccchhhhhhcccccceeeeeccccc
Confidence 55556555543 134689999999999999999999888889888887653
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.50 E-value=1.2e-13 Score=116.03 Aligned_cols=100 Identities=9% Similarity=0.168 Sum_probs=69.1
Q ss_pred CCcEEEecCCC-CCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTIS-DVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~-~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|.|||+||.+ ..++...|..++..|.++ ||.|+.+|+|..+... .....+|+.+.++.+... ..
T Consensus 62 ~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~----G~~Vv~~~YRl~p~~~-------~p~~~~d~~~a~~~~~~~---~~ 127 (261)
T d2pbla1 62 VGLFVFVHGGYWMAFDKSSWSHLAVGALSK----GWAVAMPSYELCPEVR-------ISEITQQISQAVTAAAKE---ID 127 (261)
T ss_dssp SEEEEEECCSTTTSCCGGGCGGGGHHHHHT----TEEEEEECCCCTTTSC-------HHHHHHHHHHHHHHHHHH---SC
T ss_pred CCeEEEECCCCCccCChhHhhhHHHHHhcC----Cceeeccccccccccc-------CchhHHHHHHHHHHHHhc---cc
Confidence 78999999954 125667777888999987 9999999999765432 334444444433333211 14
Q ss_pred CcEEEEecchHHHHHHHHHHhC------CCCcceEEEeccC
Q 017180 169 SDLVIFGGGHAATLTVRAAKKN------LVKPTAIAAVAPT 203 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~~------p~~v~~lvl~~p~ 203 (376)
.+++|+|||.||.++..++... ...+++++.+++.
T Consensus 128 ~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (261)
T d2pbla1 128 GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPL 168 (261)
T ss_dssp SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCC
T ss_pred CceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccc
Confidence 6899999999999998766532 2346788888763
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.40 E-value=7.7e-12 Score=110.14 Aligned_cols=108 Identities=12% Similarity=0.035 Sum_probs=69.6
Q ss_pred CCcEEEecCCCCC-c--cchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCC
Q 017180 90 SKNILMIPTISDV-S--TVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFVVDLINAPDSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~-~--~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~ 165 (376)
.|.||++||.|-. + ....++.++..+++. |+.|+.+|||..+... .......+++..+.+..+.+....
T Consensus 106 ~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~----g~~VvsvdYRla~~~~pe~~~p~~l~D~~~a~~wl~~~~~~--- 178 (358)
T d1jkma_ 106 LPGLVYTHGGGMTILTTDNRVHRRWCTDLAAA----GSVVVMVDFRNAWTAEGHHPFPSGVEDCLAAVLWVDEHRES--- 178 (358)
T ss_dssp EEEEEEECCSTTTSSCSSSHHHHHHHHHHHHT----TCEEEEEECCCSEETTEECCTTHHHHHHHHHHHHHHHTHHH---
T ss_pred CCeEEEecCCeeeeccccccccchHHHHHHhh----hheeeeeeecccccccccCCCchhhHHHHHHHHHHHHhccc---
Confidence 5689999997522 1 234566778888876 9999999999875433 111222344444444444433210
Q ss_pred CCCCcEEEEecchHHHHHHHHHHh-----CCCCcceEEEeccCC
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKK-----NLVKPTAIAAVAPTW 204 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~-----~p~~v~~lvl~~p~~ 204 (376)
....+++|+|+|.||.+++.++.. .+..+.++++..|..
T Consensus 179 ~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~ 222 (358)
T d1jkma_ 179 LGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYI 222 (358)
T ss_dssp HTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCC
T ss_pred cCCccceeecccCchHHHHHHHHHHhhcCCCcccccccccccee
Confidence 025689999999999999877652 244678888888743
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.38 E-value=2.7e-12 Score=110.94 Aligned_cols=107 Identities=10% Similarity=0.002 Sum_probs=66.2
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|.||++||.+.. ++...+..++..+.+. .|+.|+.+|+|...+.. .....++..+.+..+.+... ......
T Consensus 79 ~P~il~iHGGg~~~g~~~~~~~~~~~l~~~---~g~~Vv~v~Yrlap~~~---~p~~~~d~~~a~~~~~~~~~-~~~~d~ 151 (311)
T d1jjia_ 79 SPVLVYYHGGGFVICSIESHDALCRRIARL---SNSTVVSVDYRLAPEHK---FPAAVYDCYDATKWVAENAE-ELRIDP 151 (311)
T ss_dssp EEEEEEECCSTTTSCCTGGGHHHHHHHHHH---HTSEEEEEECCCTTTSC---TTHHHHHHHHHHHHHHHTHH-HHTEEE
T ss_pred ceEEEEEcCCCCccCChhhhhhhhhhhhhc---CCcEEEEeccccccccc---cchhhhhhhhhhhHHHHhHH-HhCcCh
Confidence 6789999997522 3455556666666553 28999999999654332 22233343333333333221 000123
Q ss_pred CcEEEEecchHHHHHHHHHH----hCCCCcceEEEeccC
Q 017180 169 SDLVIFGGGHAATLTVRAAK----KNLVKPTAIAAVAPT 203 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~----~~p~~v~~lvl~~p~ 203 (376)
++++|+|+|.||.+++.++. .....+.+.+++.|.
T Consensus 152 ~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~ 190 (311)
T d1jjia_ 152 SKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPV 190 (311)
T ss_dssp EEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCC
T ss_pred hHEEEEeeecCCcceeechhhhhhccccccceeeeecce
Confidence 57999999999998887765 334456778888874
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.36 E-value=2.8e-12 Score=113.88 Aligned_cols=126 Identities=11% Similarity=-0.010 Sum_probs=80.1
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCCcc-----------chHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCC
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDVST-----------VEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPK 141 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~-----------~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~ 141 (376)
||++|.....-+...++-|+||+.|+++ .. ...+....+.|+++ ||-|+.+|.||+|.|+..-
T Consensus 33 DG~~L~~~v~~P~~~~~~P~il~~~pYg--~~~~~~~~~~~~~~~~~~~~~~~~a~~----Gy~vv~~d~RG~g~S~G~~ 106 (381)
T d1mpxa2 33 DGVKLHTVIVLPKGAKNAPIVLTRTPYD--ASGRTERLASPHMKDLLSAGDDVFVEG----GYIRVFQDVRGKYGSEGDY 106 (381)
T ss_dssp TSCEEEEEEEEETTCCSEEEEEEEESSC--HHHHTCSSCCSSHHHHSCGGGHHHHHT----TCEEEEEECTTSTTCCSCC
T ss_pred CCCEEEEEEEEeCCCCCccEEEEEccCC--CCCcccccccccccccchhHHHHHHhC----CCEEEEEecCccCCCCCce
Confidence 4777765444333332256778889876 32 11222345678887 9999999999999998432
Q ss_pred CCC---------CHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 142 MDY---------NADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 142 ~~~---------~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
... ...+.++|..+.++.+..+......+|.++|+|+||.+++.+|...|..++++|..+|..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~ 178 (381)
T d1mpxa2 107 VMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMI 178 (381)
T ss_dssp CTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCC
T ss_pred eccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeecccc
Confidence 100 011123344433332211101135689999999999999999999999999999988754
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.33 E-value=5.1e-12 Score=105.24 Aligned_cols=106 Identities=7% Similarity=0.042 Sum_probs=78.4
Q ss_pred cEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 92 NILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 92 ~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
||||+||++++ .+...|..+...|.+... |+.|+++|+.....++ ........++.++.+.+.+++... ..+
T Consensus 7 PVVLvHGlg~s~~~~~~m~~l~~~l~~~~p--G~~V~~l~~g~~~~~~~~~~~~~~~~~~~e~v~~~I~~~~~----~~~ 80 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIP--GIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDPK----LQQ 80 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHST--TCCEEECCCSSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGG----GTT
T ss_pred cEEEECCCCCCCCChHHHHHHHHHHHHHCC--CeEEEEEEcCCCcccccccchhhhHHHHHHHHHHHHHhccc----ccc
Confidence 89999999833 234568888888876433 7999999987665543 111234567788888888776520 146
Q ss_pred cEEEEecchHHHHHHHHHHhCCC-CcceEEEeccC
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLV-KPTAIAAVAPT 203 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~p~ 203 (376)
++.+|||||||.++..++.+++. .|..+|.++++
T Consensus 81 ~v~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsP 115 (279)
T d1ei9a_ 81 GYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQ 115 (279)
T ss_dssp CEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCC
T ss_pred ceeEEEEccccHHHHHHHHHcCCCCcceEEEECCC
Confidence 79999999999999999998775 58999998764
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.30 E-value=6.2e-11 Score=102.50 Aligned_cols=90 Identities=11% Similarity=0.040 Sum_probs=57.0
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHh---CCCCCCC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLIN---APDSPVS 165 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~---~l~~~~~ 165 (376)
.|.||++||.+.. ++...+..+...++.. .||.|+.+|+|...+..-+ ..+++..+.+..+.+ +++
T Consensus 78 ~Pvvv~iHGGG~~~g~~~~~~~~~~~la~~---~G~~V~~vdYrl~pe~~~~---~~~~d~~~~~~~~~~~~~~~g---- 147 (317)
T d1lzla_ 78 VPVLLWIHGGGFAIGTAESSDPFCVEVARE---LGFAVANVEYRLAPETTFP---GPVNDCYAALLYIHAHAEELG---- 147 (317)
T ss_dssp EEEEEEECCSTTTSCCGGGGHHHHHHHHHH---HCCEEEEECCCCTTTSCTT---HHHHHHHHHHHHHHHTHHHHT----
T ss_pred CcEEEEecCcccccccccccchHHHhHHhh---cCCcccccccccccccccc---ccccccccchhHHHHHHHHhC----
Confidence 5689999996422 3445555666666542 1899999999987654322 223333333333322 222
Q ss_pred CCCCcEEEEecchHHHHHHHHHHh
Q 017180 166 SSESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 166 ~~~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
...++++++|+|.||.+++.++.+
T Consensus 148 ~D~~rI~l~G~SaGg~la~~~~~~ 171 (317)
T d1lzla_ 148 IDPSRIAVGGQSAGGGLAAGTVLK 171 (317)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHH
T ss_pred CCHHHEEEEEeccccHHHHHHHhh
Confidence 124679999999999999988763
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.29 E-value=7.2e-10 Score=98.91 Aligned_cols=88 Identities=16% Similarity=0.083 Sum_probs=65.3
Q ss_pred HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCC--------------CCCCCCcEEEEec
Q 017180 111 VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSP--------------VSSSESDLVIFGG 176 (376)
Q Consensus 111 ~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~--------------~~~~~~~~~lvG~ 176 (376)
..+.|.++ ||.|+.+|.||.|.|+......+.++ .+|..++|+.+..+ ......+|.++|+
T Consensus 128 ~~~~~~~~----GYavv~~D~RG~g~S~G~~~~~~~~e-~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~ 202 (405)
T d1lnsa3 128 LNDYFLTR----GFASIYVAGVGTRSSDGFQTSGDYQQ-IYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGK 202 (405)
T ss_dssp HHHHHHTT----TCEEEEECCTTSTTSCSCCCTTSHHH-HHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEE
T ss_pred chHHHHhC----CCEEEEECCCCCCCCCCccccCChhh-hhhHHHHHHHHHhcccccccccccccccccccCCeeEEEec
Confidence 34677776 99999999999999996544555554 45555555544310 0112347999999
Q ss_pred chHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 177 GHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 177 S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
|+||..++.+|...|..++++|..++.
T Consensus 203 SY~G~~q~~aA~~~pp~LkAivp~~~~ 229 (405)
T d1lnsa3 203 SYLGTMAYGAATTGVEGLELILAEAGI 229 (405)
T ss_dssp THHHHHHHHHHTTTCTTEEEEEEESCC
T ss_pred CHHHHHHHHHHhcCCccceEEEecCcc
Confidence 999999999999999899999988764
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.22 E-value=7e-11 Score=101.71 Aligned_cols=107 Identities=7% Similarity=-0.063 Sum_probs=66.8
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSE 168 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 168 (376)
.|.||++||.+.. ++...+..+...++.+. ++.|+.+|+|....... ....++..+.+..+.+... ......
T Consensus 72 ~Pvvv~iHGGg~~~g~~~~~~~~~~~~a~~~---~~~v~~v~Yrl~p~~~~---p~~~~D~~~~~~~l~~~~~-~~~~d~ 144 (308)
T d1u4na_ 72 YPALVYYHGGGWVVGDLETHDPVCRVLAKDG---RAVVFSVDYRLAPEHKF---PAAVEDAYDALQWIAERAA-DFHLDP 144 (308)
T ss_dssp EEEEEEECCSTTTSCCTTTTHHHHHHHHHHH---TSEEEEECCCCTTTSCT---THHHHHHHHHHHHHHTTTG-GGTEEE
T ss_pred CCEEEEEecCeeeeeccccccchhhhhhhcc---ccccccccccccccccc---ccccchhhhhhhHHHHhHH-hcCCCc
Confidence 5789999996522 45566677777777752 57899999986654322 2233444444444443321 111124
Q ss_pred CcEEEEecchHHHHHHHHHHh----CCCCcceEEEeccC
Q 017180 169 SDLVIFGGGHAATLTVRAAKK----NLVKPTAIAAVAPT 203 (376)
Q Consensus 169 ~~~~lvG~S~Gg~ia~~~a~~----~p~~v~~lvl~~p~ 203 (376)
++++++|+|.||.+++.++.. ....+....++.+.
T Consensus 145 ~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~ 183 (308)
T d1u4na_ 145 ARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPS 183 (308)
T ss_dssp EEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCC
T ss_pred ceEEEeeccccchhHHHHHHhhhhccCCCcccccccccc
Confidence 579999999999999887763 23345666777663
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.17 E-value=1.5e-09 Score=90.37 Aligned_cols=36 Identities=17% Similarity=0.117 Sum_probs=33.3
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.+.+.++|+|+||..++.+|.++|+++++++.+++.
T Consensus 134 ~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~ 169 (255)
T d1jjfa_ 134 REHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAA 169 (255)
T ss_dssp GGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCC
T ss_pred cceeEeeeccchhHHHHHHHHhCCCcccEEEEEccC
Confidence 467999999999999999999999999999999874
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.14 E-value=2e-10 Score=101.97 Aligned_cols=123 Identities=12% Similarity=-0.004 Sum_probs=80.0
Q ss_pred CceeEEEEecccCCCCCCCcEEEecCCCCC----------ccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCC
Q 017180 73 NSINIYYEKHERESPDPSKNILMIPTISDV----------STVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKM 142 (376)
Q Consensus 73 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~----------~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~ 142 (376)
||++|+....-+...++-|+||+.|+++.. ............|+++ ||-|+.+|.||+|.|+..-.
T Consensus 37 DG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~----Gy~vv~~d~RG~g~S~G~~~ 112 (385)
T d2b9va2 37 DGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEG----GYIRVFQDIRGKYGSQGDYV 112 (385)
T ss_dssp TSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHT----TCEEEEEECTTSTTCCSCCC
T ss_pred CCCEEEEEEEEcCCCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhC----CcEEEEEcCCcccCCCCcee
Confidence 477887665544333335666766876400 1112233455678887 99999999999999984311
Q ss_pred C-------------CCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 143 D-------------YNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 143 ~-------------~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
. ...++..+.++.+.++.. ....+|.++|+|+||.+++.+|...|..+++++..++.
T Consensus 113 ~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~----~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~ 182 (385)
T d2b9va2 113 MTRPPHGPLNPTKTDETTDAWDTVDWLVHNVP----ESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPM 182 (385)
T ss_dssp TTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCT----TEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEEC
T ss_pred eccccccccccchhhHHHHHHHHHHHHHhccC----ccccceeeccccHHHHHHHHHHhccCCcceEEEEeccc
Confidence 1 122333333333334321 23568999999999999999999988888988887764
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.13 E-value=1.7e-09 Score=91.05 Aligned_cols=123 Identities=13% Similarity=-0.016 Sum_probs=67.8
Q ss_pred CceeEEEEecccC---CCCCCCcEEEecCCCCCccchHh-HHHHHHHHhhhCCcceEEEEeCCCCCcCCCC----CCCCC
Q 017180 73 NSINIYYEKHERE---SPDPSKNILMIPTISDVSTVEEW-RLVAQDIVQRVGKVNWRATIVDWPGLGYSDR----PKMDY 144 (376)
Q Consensus 73 ~g~~l~y~~~g~~---~~~~~~~vvllHG~~~~~~~~~~-~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~----~~~~~ 144 (376)
||.+|.+...-+. ..++-|.||++||.+.......+ ......+... ++-+...+.++...... .....
T Consensus 16 DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (280)
T d1qfma2 16 DGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHM----GGVLAVANIRGGGEYGETWHKGGILA 91 (280)
T ss_dssp TSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHH----CCEEEEECCTTSSTTHHHHHHTTSGG
T ss_pred CCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcchhhhhhhccc----ceeeeccccccccccchhhhhccccc
Confidence 4677755544332 22335789999996522222222 2233344443 67777777666543210 11111
Q ss_pred CHHHHHHH----HHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 145 NADVMEKF----VVDLINAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 145 ~~~~~~~~----l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
......++ ......... .......++|+|.||..+...+...++.+..++...+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~ 150 (280)
T d1qfma2 92 NKQNCFDDFQCAAEYLIKEGY----TSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGV 150 (280)
T ss_dssp GTHHHHHHHHHHHHHHHHTTS----CCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCC
T ss_pred ccccccchhhhhhhhhhhhcc----cccccccccccccccchhhhhhhcccchhhheeeeccc
Confidence 11111122 222223322 13567888999999999999999999888888877663
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.04 E-value=1.6e-08 Score=85.64 Aligned_cols=107 Identities=9% Similarity=0.048 Sum_probs=72.6
Q ss_pred CCcEEEecCCCCCccchHhHH---HHHHHHhhhCCcceEEEEeCCCCCcCCCCCC---------CCCCHH-HHHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRL---VAQDIVQRVGKVNWRATIVDWPGLGYSDRPK---------MDYNAD-VMEKFVVDL 156 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~---~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~---------~~~~~~-~~~~~l~~~ 156 (376)
-|+|+|+||.++......|.. +...+.+. ++-|+++|..+.+...... .....+ .+.+++...
T Consensus 34 ~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 109 (288)
T d1sfra_ 34 SPALYLLDGLRAQDDFSGWDINTPAFEWYDQS----GLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGW 109 (288)
T ss_dssp BCEEEEECCTTCCSSSCHHHHHCCHHHHHTTS----SCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHH
T ss_pred ceEEEEcCCCCCCCcchhhhhhccHHHHHHhC----CCEEEEeccCCCCCCccccCcccccccccchhHHHHHHHHhHHH
Confidence 678889999884334445533 34455554 8999999988776544211 112223 234555555
Q ss_pred HhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 157 INAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 157 l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
|++.- ....+++.++|+||||..|+.++.++|+++.+++.++|.
T Consensus 110 i~~~~---~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~ 153 (288)
T d1sfra_ 110 LQANR---HVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGL 153 (288)
T ss_dssp HHHHH---CBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred HHHhc---CCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCc
Confidence 54421 112457999999999999999999999999999999985
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.99 E-value=6.4e-11 Score=100.91 Aligned_cols=111 Identities=15% Similarity=0.146 Sum_probs=70.1
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+|++++||||.++.....+..+...+.++ .+++||++|+.......-...........+.+.++|+.+........+
T Consensus 70 ~pt~iiiHGw~~~~~~~~~~~~~~a~l~~---~d~NVI~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~ 146 (337)
T d1rp1a2 70 KKTRFIIHGFIDKGEENWLLDMCKNMFKV---EEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPS 146 (337)
T ss_dssp SEEEEEECCCCCTTCTTHHHHHHHHHTTT---CCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCEEEEeCCCcCCCCcchHHHHHHHHHhc---CCceEEEEeeccccCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence 78999999998554444556666665553 269999999975321110111122333444444444432100012368
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
+++|||||+|+.+|-.++ ++..++.+++.++|+.
T Consensus 147 ~vhlIGhSLGAhvAG~aG-~~~~~l~rItgLDPA~ 180 (337)
T d1rp1a2 147 QVQLIGHSLGAHVAGEAG-SRTPGLGRITGLDPVE 180 (337)
T ss_dssp GEEEEEETHHHHHHHHHH-HTSTTCCEEEEESCCC
T ss_pred heEEEeecHHHhhhHHHH-HhhccccceeccCCCc
Confidence 999999999999997555 4566899999999964
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.95 E-value=1.2e-10 Score=98.99 Aligned_cols=112 Identities=14% Similarity=0.159 Sum_probs=75.5
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAPDSPVSSSES 169 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 169 (376)
+|+++++|||.++.....+..+.+.+.++ .+++||++|+.......-...........+.+..+|+.+........+
T Consensus 70 ~pt~iiiHG~~~~~~~~~~~~~~~a~l~~---~d~NVi~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~ 146 (338)
T d1bu8a2 70 RKTRFIVHGFIDKGEDGWLLDMCKKMFQV---EKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPE 146 (338)
T ss_dssp SEEEEEECCSCCTTCTTHHHHHHHHHHTT---CCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CceEEEeCcccCCCCcccHHHHHHHHHhc---CCceEEEEechhhcccchHHHHHhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 68899999998555555566666666553 279999999976432110111223344444555555433110012468
Q ss_pred cEEEEecchHHHHHHHHHHhCCCCcceEEEeccCC
Q 017180 170 DLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPTW 204 (376)
Q Consensus 170 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~~ 204 (376)
+++|||||+|+.+|-.++..-+.++.+++.++|+.
T Consensus 147 ~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~ 181 (338)
T d1bu8a2 147 NVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (338)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred eeEEEeccHHHHHHHHHHHhhccccccccccccCc
Confidence 89999999999999999998888899999999964
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.87 E-value=9.6e-09 Score=84.95 Aligned_cols=112 Identities=8% Similarity=0.019 Sum_probs=61.9
Q ss_pred CCcEEEecCCCCCccchHhHHHHHHHHhhhCCcceEEEEeCCCCCcC-CCCCCCCCC-HHHHHHHHHHHHhCCCCCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRLVAQDIVQRVGKVNWRATIVDWPGLGY-SDRPKMDYN-ADVMEKFVVDLINAPDSPVSSS 167 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~-S~~~~~~~~-~~~~~~~l~~~l~~l~~~~~~~ 167 (376)
-|.||++||.+.......+ ..++.+.+......+-++.+|....+. ......... .+.+.+++..+++.... ....
T Consensus 44 ~Pvvv~lhG~~~~~~~~~~-~~l~~l~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~v~~~~~-~~~d 121 (246)
T d3c8da2 44 RPLAVLLDGEFWAQSMPVW-PVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVIAP-FSDR 121 (246)
T ss_dssp CCEEEESSHHHHHHTSCCH-HHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSSCHHHHHHHHHTHHHHHHHHSC-CCCC
T ss_pred CCEEEEeCCcchhccCcHH-HHHHHHHHhCCCCceEEeecccccccccccccCccHHHHHHHHHHhhhHHHHhcc-cccC
Confidence 5788888995411222233 344555554111123344444322211 111111111 22233445555544320 0112
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
.+++.++|+||||..++.++.++|+.+.+++.++|.
T Consensus 122 ~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~ 157 (246)
T d3c8da2 122 ADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGS 157 (246)
T ss_dssp GGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCC
T ss_pred ccceEEEecCchhHHHhhhhccCCchhcEEEcCCcc
Confidence 467999999999999999999999999999999984
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.87 E-value=1.3e-08 Score=85.22 Aligned_cols=107 Identities=7% Similarity=0.048 Sum_probs=71.4
Q ss_pred CCcEEEecCCCCCccchHhHH---HHHHHHhhhCCcceEEEEeCCCCCcC-CCCC-CCCCCHHH-HHHHHHHHHhCCCCC
Q 017180 90 SKNILMIPTISDVSTVEEWRL---VAQDIVQRVGKVNWRATIVDWPGLGY-SDRP-KMDYNADV-MEKFVVDLINAPDSP 163 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~---~~~~L~~~~~~~~~~Vi~~D~~G~G~-S~~~-~~~~~~~~-~~~~l~~~l~~l~~~ 163 (376)
.|+|+|+||.++......|.. +.+.+.+. ++-|+.+|--+.+. ++.+ ......++ +.++|..+|++.-
T Consensus 27 ~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~----~~iVV~p~g~~~~~y~~~~~~~~~~~~tfl~~eL~~~i~~~~-- 100 (267)
T d1r88a_ 27 PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGK----GISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDWLAANR-- 100 (267)
T ss_dssp SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTS----SSEEEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHHHHHHHS--
T ss_pred CCEEEEcCCCCCCCCcchhhhccHHHHHHhhC----CeEEEEECCCCCcCCccccccccccHHHHHHHHHHHHHHHhc--
Confidence 578889999863344456654 34445554 89999998522211 2211 12233433 4446666665431
Q ss_pred CCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 164 VSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 164 ~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
....+++.+.|+||||..|+.+|.++|+++++++.+++.
T Consensus 101 -~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~ 139 (267)
T d1r88a_ 101 -GLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGF 139 (267)
T ss_dssp -CCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred -CCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCc
Confidence 123567899999999999999999999999999999984
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.79 E-value=3.5e-08 Score=83.17 Aligned_cols=107 Identities=8% Similarity=0.102 Sum_probs=71.6
Q ss_pred CCcEEEecCCCCCccchHhHH---HHHHHHhhhCCcceEEEEeCCCCCcCCC---CC------CCCCCHHH-HHHHHHHH
Q 017180 90 SKNILMIPTISDVSTVEEWRL---VAQDIVQRVGKVNWRATIVDWPGLGYSD---RP------KMDYNADV-MEKFVVDL 156 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~~~~---~~~~L~~~~~~~~~~Vi~~D~~G~G~S~---~~------~~~~~~~~-~~~~l~~~ 156 (376)
.|+|+|+||.++..+...|.. +.+.+.+. ++-|+.+|-...+... .+ ......++ +.++|..+
T Consensus 29 ~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~----~~ivV~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 104 (280)
T d1dqza_ 29 PHAVYLLDGLRAQDDYNGWDINTPAFEEYYQS----GLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAW 104 (280)
T ss_dssp SSEEEECCCTTCCSSSCHHHHHSCHHHHHTTS----SSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHH
T ss_pred CCEEEECCCCCCCCccchhhhcchHHHHHHhC----CcEEEEECCCCCCcCccccCCcccccCCcchhHHHHHHHHHHHH
Confidence 678888899873334556653 33455554 8999999953322211 11 11233333 45666666
Q ss_pred HhCCCCCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 157 INAPDSPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 157 l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
|++.- ....+++.+.|+||||..|+.+|.++|+++.+++.+++.
T Consensus 105 i~~~~---~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~ 148 (280)
T d1dqza_ 105 LQANK---GVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGF 148 (280)
T ss_dssp HHHHH---CCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCC
T ss_pred HHHhc---CCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCc
Confidence 65532 112456899999999999999999999999999999985
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.67 E-value=3.5e-07 Score=77.23 Aligned_cols=107 Identities=10% Similarity=0.039 Sum_probs=64.0
Q ss_pred CcEEEecCCCCCccchHhHH---HHHHHHhhhCCcceEEEEeCCCC----------------CcCCCCCC-------CCC
Q 017180 91 KNILMIPTISDVSTVEEWRL---VAQDIVQRVGKVNWRATIVDWPG----------------LGYSDRPK-------MDY 144 (376)
Q Consensus 91 ~~vvllHG~~~~~~~~~~~~---~~~~L~~~~~~~~~~Vi~~D~~G----------------~G~S~~~~-------~~~ 144 (376)
|+|.++||.+ ++...|.. ......+. +..|+.++..+ .+.+-... ..+
T Consensus 50 PVLYlLhG~~--~~~~~w~~~~~~~~~~~~~----~~~vv~~~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~ 123 (299)
T d1pv1a_ 50 PTVFYLSGLT--CTPDNASEKAFWQFQADKY----GFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHY 123 (299)
T ss_dssp CEEEEECCTT--CCHHHHHHHSCHHHHHHHH----TCEEEECCSSCCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTC
T ss_pred CEEEEcCCCC--CCHHHHHHhhhHHHHHHHc----CCceecCCCcccccccCCcccccccccCCCccccccccCCccccc
Confidence 6778889999 77777743 22333343 68888887432 12221100 111
Q ss_pred CHHH-HHHHHHHHHhCC-C---CCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccC
Q 017180 145 NADV-MEKFVVDLINAP-D---SPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPT 203 (376)
Q Consensus 145 ~~~~-~~~~l~~~l~~l-~---~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~ 203 (376)
..++ +.++|..+|+.. . .+.........|.|+||||.-|+.+|.+ +|++..+++..+|.
T Consensus 124 ~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~ 189 (299)
T d1pv1a_ 124 QMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPI 189 (299)
T ss_dssp BHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCC
T ss_pred chHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCc
Confidence 2233 334555555442 1 0000012468999999999999999985 58999999988873
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.51 E-value=2.7e-05 Score=69.72 Aligned_cols=125 Identities=13% Similarity=0.063 Sum_probs=78.1
Q ss_pred ceeEEEEecccCCC-CCCCcEEEecCCCCCccchHhHHHHHH-----------HHhhh--CCcceEEEEeCCC-CCcCCC
Q 017180 74 SINIYYEKHERESP-DPSKNILMIPTISDVSTVEEWRLVAQD-----------IVQRV--GKVNWRATIVDWP-GLGYSD 138 (376)
Q Consensus 74 g~~l~y~~~g~~~~-~~~~~vvllHG~~~~~~~~~~~~~~~~-----------L~~~~--~~~~~~Vi~~D~~-G~G~S~ 138 (376)
+.+|+|.-....+. +..|.++.+-|.+ +++..|..+.+. +..+- =....+++-+|.| |.|.|-
T Consensus 31 ~~~lffw~~~s~~~~~~~Pl~~wlnGGP--G~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDqPvGtGfS~ 108 (452)
T d1ivya_ 31 SKHLHYWFVESQKDPENSPVVLWLNGGP--GCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSY 108 (452)
T ss_dssp TEEEEEEEECCSSCGGGSCEEEEECCTT--TBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCE
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCC--cHHHHHHHHHccCCcEEcCCCCeeccCCcchhcccCEEEEecCCCccccc
Confidence 55677766654322 3378899999999 777776433211 00000 0013679999986 999985
Q ss_pred --CCCCCCCHHHHHHHHHH----HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH----hCCCCcceEEEeccC
Q 017180 139 --RPKMDYNADVMEKFVVD----LINAPDSPVSSSESDLVIFGGGHAATLTVRAAK----KNLVKPTAIAAVAPT 203 (376)
Q Consensus 139 --~~~~~~~~~~~~~~l~~----~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~----~~p~~v~~lvl~~p~ 203 (376)
......+.++.+.|+.+ |++.... ....+++|.|-|.||..+-.+|. +..-.++++++.+|.
T Consensus 109 ~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~---~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~ 180 (452)
T d1ivya_ 109 SDDKFYATNDTEVAQSNFEALQDFFRLFPE---YKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 180 (452)
T ss_dssp ESSCCCCCBHHHHHHHHHHHHHHHHHHSGG---GTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHhchh---hcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCc
Confidence 22223444555655544 4444321 13668999999999999888876 234568899998874
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.45 E-value=2e-07 Score=80.84 Aligned_cols=100 Identities=7% Similarity=-0.017 Sum_probs=69.4
Q ss_pred CCcEEEecCCCCC-----ccchHhHH----HHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHhCC
Q 017180 90 SKNILMIPTISDV-----STVEEWRL----VAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLINAP 160 (376)
Q Consensus 90 ~~~vvllHG~~~~-----~~~~~~~~----~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l 160 (376)
+-||||+||+.+. .....|.- +.+.|.+. |++|++...+.++ +.++-+..|...|+..
T Consensus 7 ~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~----G~~V~~~~V~p~~---------S~~~RA~eL~~~I~~~ 73 (388)
T d1ku0a_ 7 DAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDN----GYRTYTLAVGPLS---------SNWDRACEAYAQLVGG 73 (388)
T ss_dssp CCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHT----TCCEEECCCCSSB---------CHHHHHHHHHHHHHCE
T ss_pred CCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhC----CCEEEEeccCCcc---------CHHHHHHHHHHHHhhh
Confidence 5689999998643 12345653 77788776 9999999987654 4556666676666543
Q ss_pred CCCC-----------------------CCCCCcEEEEecchHHHHHHHHHHhC-------------------------CC
Q 017180 161 DSPV-----------------------SSSESDLVIFGGGHAATLTVRAAKKN-------------------------LV 192 (376)
Q Consensus 161 ~~~~-----------------------~~~~~~~~lvG~S~Gg~ia~~~a~~~-------------------------p~ 192 (376)
...+ -....||+||||||||..+-.++... ..
T Consensus 74 ~~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~ 153 (388)
T d1ku0a_ 74 TVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHR 153 (388)
T ss_dssp EEECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCC
T ss_pred hhhhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCc
Confidence 1000 00135899999999999998887632 23
Q ss_pred CcceEEEecc
Q 017180 193 KPTAIAAVAP 202 (376)
Q Consensus 193 ~v~~lvl~~p 202 (376)
.|++|+.++.
T Consensus 154 ~V~SvTTIsT 163 (388)
T d1ku0a_ 154 FVLSVTTIAT 163 (388)
T ss_dssp CEEEEEEESC
T ss_pred ceEEEEeccC
Confidence 6899999976
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.32 E-value=0.00014 Score=64.12 Aligned_cols=128 Identities=14% Similarity=0.034 Sum_probs=79.5
Q ss_pred ceeEEEEecccC-CCCCCCcEEEecCCCCCccchHhHHHHHH----------HHhh--hCCcceEEEEeC-CCCCcCCC-
Q 017180 74 SINIYYEKHERE-SPDPSKNILMIPTISDVSTVEEWRLVAQD----------IVQR--VGKVNWRATIVD-WPGLGYSD- 138 (376)
Q Consensus 74 g~~l~y~~~g~~-~~~~~~~vvllHG~~~~~~~~~~~~~~~~----------L~~~--~~~~~~~Vi~~D-~~G~G~S~- 138 (376)
+.+++|.-..+. +++.+|.||.+-|.+ +++..|-.+.+. +..+ .=..-.+++-+| .-|-|.|-
T Consensus 27 ~~~lfyw~~~s~~~~~~~Pl~~WlnGGP--G~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~~~anllfiD~PvGtGfSy~ 104 (421)
T d1wpxa1 27 DKHFFFWTFESRNDPAKDPVILWLNGGP--GCSSLTGLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYS 104 (421)
T ss_dssp CCEEEEEEECCSSCTTTSCEEEEECCTT--TBCTHHHHHHTTSSEEECTTSCEEECTTCGGGSSEEEEECCSTTSTTCBC
T ss_pred CceEEEEEEEeCCCCCCCCEEEEECCCC--cHHHHHHHHHhcCCcEECCCCccccCCcccccccCEEEEecCCCCCceec
Confidence 345666544432 224478999999999 777777444321 0000 000137899999 55999994
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCCC-CC--CCCcEEEEecchHHHHHHHHHHh---C---CCCcceEEEeccC
Q 017180 139 RPKMDYNADVMEKFVVDLINAPDSPV-SS--SESDLVIFGGGHAATLTVRAAKK---N---LVKPTAIAAVAPT 203 (376)
Q Consensus 139 ~~~~~~~~~~~~~~l~~~l~~l~~~~-~~--~~~~~~lvG~S~Gg~ia~~~a~~---~---p~~v~~lvl~~p~ 203 (376)
......+....++|+.++++..-... .. ...+++|.|-|.||..+-.+|.+ + +-.++++++.+|.
T Consensus 105 ~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGng~ 178 (421)
T d1wpxa1 105 GSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGL 178 (421)
T ss_dssp SSCCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEESCC
T ss_pred CCccccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecCCc
Confidence 33345566677777776663321000 00 14589999999999999888862 2 3457799998874
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.26 E-value=2.1e-06 Score=71.45 Aligned_cols=108 Identities=6% Similarity=-0.021 Sum_probs=63.4
Q ss_pred CCcEEEecCCCCCccchH-------hHHHHHHHHhhhCCcceEEEEeCCCCCcCCCCCCCCCCHHHHHHHHHHHHh----
Q 017180 90 SKNILMIPTISDVSTVEE-------WRLVAQDIVQRVGKVNWRATIVDWPGLGYSDRPKMDYNADVMEKFVVDLIN---- 158 (376)
Q Consensus 90 ~~~vvllHG~~~~~~~~~-------~~~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~---- 158 (376)
=|.|+++||.+ ++... ...+.+.+........+.|+.++..+.+..... + .......+...++
T Consensus 55 yPvl~~lhG~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~ 128 (273)
T d1wb4a1 55 YNIFYLMHGGG--ENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQN---F-YQEFRQNVIPFVESKYS 128 (273)
T ss_dssp CEEEEEECCTT--CCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCSTTCCTTT---H-HHHHHHTHHHHHHHHSC
T ss_pred ceEEEEEeCCC--CCcchhhhhccchhHHHHhhhhhhccCCceeeccccCCCCCcccc---c-hhcccccccchhhhhhh
Confidence 46778889987 44322 223334443322222588888888765432211 1 1122222211111
Q ss_pred -CCC----CCCCCCCCcEEEEecchHHHHHHHHHHhCCCCcceEEEeccC
Q 017180 159 -APD----SPVSSSESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAPT 203 (376)
Q Consensus 159 -~l~----~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p~ 203 (376)
... .......+++.+.|+|+||..++.+|.++|+++.+++.++|.
T Consensus 129 ~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~ 178 (273)
T d1wb4a1 129 TYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGD 178 (273)
T ss_dssp CSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCC
T ss_pred hhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCcc
Confidence 100 000012467999999999999999999999999999999984
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=98.26 E-value=9.3e-06 Score=67.09 Aligned_cols=34 Identities=6% Similarity=0.024 Sum_probs=27.6
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcceEEEecc
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTAIAAVAP 202 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~p 202 (376)
..+..+.|+|+||..++.++.+ ++.+.+++..+|
T Consensus 140 ~~~~~i~G~S~GG~~a~~~~~~-~~~f~~~~a~s~ 173 (265)
T d2gzsa1 140 RQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASP 173 (265)
T ss_dssp EEEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESG
T ss_pred cCceEEEeccHHHHHHHHHHHc-CcccCEEEEECC
Confidence 3568889999999999987665 567788888877
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.15 E-value=5.6e-06 Score=69.93 Aligned_cols=35 Identities=6% Similarity=-0.026 Sum_probs=29.3
Q ss_pred CCcEEEEecchHHHHHHHHHHhCCCCcce-EEEecc
Q 017180 168 ESDLVIFGGGHAATLTVRAAKKNLVKPTA-IAAVAP 202 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~-lvl~~p 202 (376)
..++.|+|+|+||.+|+.++..+|+.++. +.++++
T Consensus 10 p~rI~V~G~SsGG~mA~~la~a~sd~f~aga~vvAg 45 (318)
T d2d81a1 10 PNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAG 45 (318)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESC
T ss_pred ccceEEEEECHHHHHHHHHHHhcccceeeeEEEecc
Confidence 56799999999999999999999999974 444444
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.02 E-value=0.00039 Score=62.38 Aligned_cols=60 Identities=7% Similarity=0.006 Sum_probs=49.2
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHhcc-------------------------------------cCCceEEEeCCC-CCCC
Q 017180 312 KLPLLVVSTEGSPRRSKAEMEALKGA-------------------------------------KGVTKFVEVPGA-LLPQ 353 (376)
Q Consensus 312 ~~Pvlii~G~~D~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~-H~~~ 353 (376)
.++|||.+|+.|.+|+....+.+.+. ..+.+++.+.++ |++.
T Consensus 372 girVLIy~Gd~D~icn~~Gte~~i~~L~w~g~~~f~~~~~~~~w~~~~~~~~~~~~vaG~~~~~~nltf~~V~~AGHmvP 451 (483)
T d1ac5a_ 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP 451 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred CCEEEEEECChhhcCCCHHHHHHHHhCCCccccccccCccccccccccccccCCcEEEEEEEEeCCeEEEEECCccccCc
Confidence 57999999999999997666654311 125678899998 9999
Q ss_pred CCChHHHHHHHHHHHHhh
Q 017180 354 EEYPAMVAQELYQFLQQT 371 (376)
Q Consensus 354 ~e~pe~~~~~i~~fl~~~ 371 (376)
.++|+...+.|..||.++
T Consensus 452 ~dqP~~a~~mi~~fl~~~ 469 (483)
T d1ac5a_ 452 FDKSLVSRGIVDIYSNDV 469 (483)
T ss_dssp HHCHHHHHHHHHHHTTCC
T ss_pred ccCHHHHHHHHHHHhCCc
Confidence 999999999999999865
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.68 E-value=0.0017 Score=58.89 Aligned_cols=106 Identities=7% Similarity=-0.051 Sum_probs=67.7
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCC--CcC--CCC--CCCCCCHHHHHHHHHH---HHhC
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPG--LGY--SDR--PKMDYNADVMEKFVVD---LINA 159 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G--~G~--S~~--~~~~~~~~~~~~~l~~---~l~~ 159 (376)
-|++|+|||.+.. ++...+. -...+.+. +.=||.+.+|= +|. +.. ....+.+.|....|+. -|..
T Consensus 113 lPV~v~ihGG~~~~gs~~~~~-~~~~~~~~----~vIvVt~nYRLg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~ 187 (532)
T d2h7ca1 113 LPVMVWIHGGGLMVGAASTYD-GLALAAHE----NVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIAS 187 (532)
T ss_dssp EEEEEEECCSTTTSCCSTTSC-CHHHHHHH----TCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGG
T ss_pred cEEEEEEeCCcccccccccCC-chhhhhcC----ceEEEEEeeccCCCccccccccccccccccHHHHHHHHHHHHHHHH
Confidence 4789999997643 2233332 23334444 89999999983 232 221 1234555565555543 4555
Q ss_pred CCCCCCCCCCcEEEEecchHHHHHHHHHH--hCCCCcceEEEeccCC
Q 017180 160 PDSPVSSSESDLVIFGGGHAATLTVRAAK--KNLVKPTAIAAVAPTW 204 (376)
Q Consensus 160 l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~--~~p~~v~~lvl~~p~~ 204 (376)
.| +...+|.|+|+|.||..+..+.. .....+.++|+.++..
T Consensus 188 FG----GDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~ 230 (532)
T d2h7ca1 188 FG----GNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 230 (532)
T ss_dssp GT----EEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred hc----CCcceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence 55 33567999999999998888766 3345789999998753
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=96.64 E-value=0.0024 Score=57.14 Aligned_cols=106 Identities=8% Similarity=-0.104 Sum_probs=66.7
Q ss_pred CCcEEEecCCCCC-ccchHhH-HHHHHHHhhhCCcceEEEEeCCCC--CcCC---C---CCCCCCCHHHHHHHHHH---H
Q 017180 90 SKNILMIPTISDV-STVEEWR-LVAQDIVQRVGKVNWRATIVDWPG--LGYS---D---RPKMDYNADVMEKFVVD---L 156 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~-~~~~~L~~~~~~~~~~Vi~~D~~G--~G~S---~---~~~~~~~~~~~~~~l~~---~ 156 (376)
-|++|+|||.+.. ++...+. .....+.+. +.=|+.+.||= +|.= + .-...+.+.|+...|.. -
T Consensus 96 lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~----~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~n 171 (483)
T d1qe3a_ 96 LPVMVWIHGGAFYLGAGSEPLYDGSKLAAQG----EVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVREN 171 (483)
T ss_dssp EEEEEEECCSTTTSCCTTSGGGCCHHHHHHH----TCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeecccccCCccccccccccccccC----ceEEEeecccccchhhccccccccccccccccHHHHHHHHHHHHH
Confidence 5889999997633 2222221 223334443 69999999983 2321 1 11234556665555553 3
Q ss_pred HhCCCCCCCCCCCcEEEEecchHHHHHHHHHH--hCCCCcceEEEeccC
Q 017180 157 INAPDSPVSSSESDLVIFGGGHAATLTVRAAK--KNLVKPTAIAAVAPT 203 (376)
Q Consensus 157 l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~--~~p~~v~~lvl~~p~ 203 (376)
|+..| +..++|.|+|||.||..+..+.. .....+.+.|+.++.
T Consensus 172 I~~FG----GDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs 216 (483)
T d1qe3a_ 172 ISAFG----GDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGA 216 (483)
T ss_dssp GGGGT----EEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCC
T ss_pred HHHcC----CCcccceeeccccccchhhhhhcccccCCcceeeccccCC
Confidence 55555 34568999999999999888766 223579999999875
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.55 E-value=0.0034 Score=56.98 Aligned_cols=106 Identities=8% Similarity=-0.131 Sum_probs=66.3
Q ss_pred CCcEEEecCCCCC---ccchHhHHHHHHHHhhhCCcceEEEEeCCC----CCcCCC---CCCCCCCHHHHHHHHHH---H
Q 017180 90 SKNILMIPTISDV---STVEEWRLVAQDIVQRVGKVNWRATIVDWP----GLGYSD---RPKMDYNADVMEKFVVD---L 156 (376)
Q Consensus 90 ~~~vvllHG~~~~---~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~----G~G~S~---~~~~~~~~~~~~~~l~~---~ 156 (376)
-|++|+|||.+.. ++...+... ...++. +.-|+.+.+| ||=.+. .....+.+.|+...|.. -
T Consensus 112 lPV~v~ihGG~~~~gs~~~~~~~~~-~~~~~~----~vvvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~n 186 (542)
T d2ha2a1 112 TPVLIWIYGGGFYSGAASLDVYDGR-FLAQVE----GAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQEN 186 (542)
T ss_dssp EEEEEEECCSTTTCCCTTSGGGCTH-HHHHHH----CCEEEEECCCCHHHHHCCCTTCSSCCSCHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEECccccccCcccccCch-hhhhhc----cceeEeeeeeccceeeecccccccCCCcCCcccHHHHHHHHHHH
Confidence 4889999996532 222223222 222333 7999999999 553222 11234555565555544 3
Q ss_pred HhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh--CCCCcceEEEeccCC
Q 017180 157 INAPDSPVSSSESDLVIFGGGHAATLTVRAAKK--NLVKPTAIAAVAPTW 204 (376)
Q Consensus 157 l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~lvl~~p~~ 204 (376)
|...| +...+|.|+|+|.||..+..+... ....+.++|+.++..
T Consensus 187 I~~FG----GDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~ 232 (542)
T d2ha2a1 187 IAAFG----GDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (542)
T ss_dssp GGGGT----EEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred HHHhh----cCccccccccccccccchhhhhhhhhhhHHhhhheeecccc
Confidence 55555 335679999999999999887662 234789999998754
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.26 E-value=0.011 Score=53.27 Aligned_cols=106 Identities=9% Similarity=-0.064 Sum_probs=65.0
Q ss_pred CCcEEEecCCCCCc-cc--hHhHHHHHHHHhhhCCcceEEEEeCCCC--Cc--CC-C--CCCCCCCHHHHHHHHHHH---
Q 017180 90 SKNILMIPTISDVS-TV--EEWRLVAQDIVQRVGKVNWRATIVDWPG--LG--YS-D--RPKMDYNADVMEKFVVDL--- 156 (376)
Q Consensus 90 ~~~vvllHG~~~~~-~~--~~~~~~~~~L~~~~~~~~~~Vi~~D~~G--~G--~S-~--~~~~~~~~~~~~~~l~~~--- 156 (376)
.|++|+|||.+... +. ..+.. .....+. +.=|+.+.+|= +| .+ + .....+.+.|....|..+
T Consensus 104 ~PV~v~ihGG~~~~gs~~~~~~~~-~~~~~~~----~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~n 178 (526)
T d1p0ia_ 104 ATVLIWIYGGGFQTGTSSLHVYDG-KFLARVE----RVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKN 178 (526)
T ss_dssp EEEEEEECCSTTTSCCTTCGGGCT-HHHHHHH----CCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHHHHHHHHHHH
T ss_pred CceEEEEECCCcccccCcccccCc-ccccccc----ceeEEecccccccccccCCCCcccccccccccchhhhhhhHHHH
Confidence 58899999976331 11 22222 1122233 78999999883 12 11 1 122355666665555543
Q ss_pred HhCCCCCCCCCCCcEEEEecchHHHHHHHHHH--hCCCCcceEEEeccCC
Q 017180 157 INAPDSPVSSSESDLVIFGGGHAATLTVRAAK--KNLVKPTAIAAVAPTW 204 (376)
Q Consensus 157 l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~--~~p~~v~~lvl~~p~~ 204 (376)
|+..| +...+|.|+|+|.||..+..+.. .....+.++|+.++..
T Consensus 179 I~~FG----GDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~ 224 (526)
T d1p0ia_ 179 IAAFG----GNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 224 (526)
T ss_dssp GGGGT----EEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred HHHhh----cCchheeehhhccccceeeccccCCcchhhhhhhhcccccc
Confidence 55555 34568999999999999876655 3334688999988654
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=96.24 E-value=0.0076 Score=54.41 Aligned_cols=106 Identities=7% Similarity=-0.144 Sum_probs=65.8
Q ss_pred CCcEEEecCCCCC---ccchHhHHHHHHHHhhhCCcceEEEEeCCCC----CcCCC---CCCCCCCHHHHHHHHHHH---
Q 017180 90 SKNILMIPTISDV---STVEEWRLVAQDIVQRVGKVNWRATIVDWPG----LGYSD---RPKMDYNADVMEKFVVDL--- 156 (376)
Q Consensus 90 ~~~vvllHG~~~~---~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G----~G~S~---~~~~~~~~~~~~~~l~~~--- 156 (376)
-|++|+|||.+.. ++...+. ....+.+. +.=||.+.+|= |-.++ .....+.+.|+...|..+
T Consensus 106 lPV~v~ihGG~~~~g~~~~~~~~-~~~~~~~~----~vvvVt~nYRlg~~GFl~~~~~~~~~gN~Gl~Dq~~AL~WV~~n 180 (532)
T d1ea5a_ 106 TTVMVWIYGGGFYSGSSTLDVYN-GKYLAYTE----EVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDN 180 (532)
T ss_dssp EEEEEEECCSTTTCCCTTCGGGC-THHHHHHH----TCEEEECCCCCHHHHHCCCTTCSSSCSCHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEcCCcccccCCccccC-cchhhccc----CccEEEEeeccccccccccccccCCCCcccchhHHHHHHHHHHH
Confidence 5889999996522 1222232 22233343 79999999883 22111 122345566665555543
Q ss_pred HhCCCCCCCCCCCcEEEEecchHHHHHHHHHH--hCCCCcceEEEeccCC
Q 017180 157 INAPDSPVSSSESDLVIFGGGHAATLTVRAAK--KNLVKPTAIAAVAPTW 204 (376)
Q Consensus 157 l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~--~~p~~v~~lvl~~p~~ 204 (376)
|+..| +...+|.|+|+|.||..+..+.. .....+.++|+.++..
T Consensus 181 I~~FG----GDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~ 226 (532)
T d1ea5a_ 181 IQFFG----GDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 226 (532)
T ss_dssp GGGGT----EEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred HHhhc----CCccceEeeeecccccchhhhccCccchhhhhhheeecccc
Confidence 55555 34568999999999998887766 2234789999998754
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=96.21 E-value=0.0049 Score=55.78 Aligned_cols=107 Identities=10% Similarity=-0.061 Sum_probs=62.7
Q ss_pred CCcEEEecCCCCC-ccchHh--HHHHH--HHHhhhCCcceEEEEeCCCC----CcCCC----CCCCCCCHHHHHHHHH--
Q 017180 90 SKNILMIPTISDV-STVEEW--RLVAQ--DIVQRVGKVNWRATIVDWPG----LGYSD----RPKMDYNADVMEKFVV-- 154 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~--~~~~~--~L~~~~~~~~~~Vi~~D~~G----~G~S~----~~~~~~~~~~~~~~l~-- 154 (376)
-|+||+|||.+.. ++...| ..+.. .+.+. +.=||.+.+|- |=..+ .....+.+.|+...|.
T Consensus 114 ~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~----~vIvVt~nYRLg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV 189 (534)
T d1llfa_ 114 LPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGK----PIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWV 189 (534)
T ss_dssp EEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTC----CCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHH
T ss_pred CeEEEEECCCccccCCCCCCCchhccchhhhccC----CeEEEEeecCCCcccccCCcccccccccccchhHHHHHHHHH
Confidence 6889999997632 222222 12221 22233 78999999992 22111 1123455555555444
Q ss_pred -HHHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH-h-------CCCCcceEEEeccCC
Q 017180 155 -DLINAPDSPVSSSESDLVIFGGGHAATLTVRAAK-K-------NLVKPTAIAAVAPTW 204 (376)
Q Consensus 155 -~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~-~-------~p~~v~~lvl~~p~~ 204 (376)
+-|...| +...+|.|+|+|.||..+..... . .-..+++.|+.++..
T Consensus 190 ~~nI~~FG----GDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 190 ADNIAGFG----GDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHHGGGGT----EEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred Hhhhhhhc----cCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCcc
Confidence 3455555 34568999999999986654433 1 112589999998743
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=96.13 E-value=0.0073 Score=54.73 Aligned_cols=108 Identities=10% Similarity=-0.041 Sum_probs=65.4
Q ss_pred CCcEEEecCCCCCc-cchHh--HHH-HHHHHhhhCCcceEEEEeCCC----CCcCCC----CCCCCCCHHHHHHHHHHH-
Q 017180 90 SKNILMIPTISDVS-TVEEW--RLV-AQDIVQRVGKVNWRATIVDWP----GLGYSD----RPKMDYNADVMEKFVVDL- 156 (376)
Q Consensus 90 ~~~vvllHG~~~~~-~~~~~--~~~-~~~L~~~~~~~~~~Vi~~D~~----G~G~S~----~~~~~~~~~~~~~~l~~~- 156 (376)
-|++|+|||.+... +...+ ..+ ...++.. .+.=||.+.+| ||-.+. .....+.+.|+...|..+
T Consensus 122 lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~---~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN~Gl~Dq~~AL~WV~ 198 (544)
T d1thga_ 122 LPVMVWIYGGAFVYGSSAAYPGNSYVKESINMG---QPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVS 198 (544)
T ss_dssp EEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTT---CCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHH
T ss_pred CCEEEEeccCCCccCCCccCCcchhhhhhhhcc---CCeEEEecccccccccccCCchhhccccccHHHHHhhhhhhhhh
Confidence 58899999976332 22222 122 2233321 17899999999 332221 112355666666555544
Q ss_pred --HhCCCCCCCCCCCcEEEEecchHHHHHHHHHHh--------CCCCcceEEEeccCC
Q 017180 157 --INAPDSPVSSSESDLVIFGGGHAATLTVRAAKK--------NLVKPTAIAAVAPTW 204 (376)
Q Consensus 157 --l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~--------~p~~v~~lvl~~p~~ 204 (376)
|+..| +..++|.|+|+|-||..+..+... ....+.++|+.++..
T Consensus 199 ~nI~~FG----GDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~ 252 (544)
T d1thga_ 199 DNIANFG----GDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HHGGGGT----EEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred hhhcccc----cCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhcccccccccc
Confidence 55555 345689999999999877766542 124789999998753
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=95.83 E-value=0.0084 Score=53.94 Aligned_cols=108 Identities=11% Similarity=-0.007 Sum_probs=63.7
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCC--CcC--C---C-CCCCCCCHHHHHHHHHH---HH
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPG--LGY--S---D-RPKMDYNADVMEKFVVD---LI 157 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G--~G~--S---~-~~~~~~~~~~~~~~l~~---~l 157 (376)
-|++|+|||.+.. ++...+..-...++.. .+.=|+.+.||= +|. + + .....+.+.|+...|.. -|
T Consensus 97 ~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~---~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~Gl~Dq~~AL~WV~~nI 173 (517)
T d1ukca_ 97 LPVWLFIQGGGYAENSNANYNGTQVIQASD---DVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYI 173 (517)
T ss_dssp EEEEEEECCSTTTSCCSCSCCCHHHHHHTT---SCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHG
T ss_pred ceEEEEEcCCccccCCCccccchhhhhhhc---cccceEEEEecccceeecCccccccccccchhHHHHHHHHHHHHHHH
Confidence 4889999997633 2222332212222221 157788999984 121 1 1 11234556666555554 45
Q ss_pred hCCCCCCCCCCCcEEEEecchHHHHHHHHHHh----CCCCcceEEEeccCC
Q 017180 158 NAPDSPVSSSESDLVIFGGGHAATLTVRAAKK----NLVKPTAIAAVAPTW 204 (376)
Q Consensus 158 ~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~----~p~~v~~lvl~~p~~ 204 (376)
+..| +...+|.|+|+|.||..+...... ....+.++|+.++..
T Consensus 174 ~~FG----GDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~ 220 (517)
T d1ukca_ 174 EQFG----GDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 220 (517)
T ss_dssp GGGT----EEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred Hhhc----CCcccccccccccchhhHHHHHhccccccccccceeeeccccc
Confidence 5555 335689999999999887655432 224799999998754
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=95.77 E-value=0.0069 Score=48.95 Aligned_cols=21 Identities=19% Similarity=0.278 Sum_probs=19.1
Q ss_pred CCcEEEEecchHHHHHHHHHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
..++++.|||+||.+|..+|.
T Consensus 124 ~~~i~vTGHSLGGAlA~L~a~ 144 (261)
T d1uwca_ 124 DYALTVTGHSLGASMAALTAA 144 (261)
T ss_dssp TSEEEEEEETHHHHHHHHHHH
T ss_pred CcceEEeccchhHHHHHHHHH
Confidence 568999999999999999887
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=95.66 E-value=0.024 Score=51.57 Aligned_cols=106 Identities=11% Similarity=0.051 Sum_probs=64.7
Q ss_pred CCcEEEecCCCCCc-cch--------HhHHHHHHHHhhhCCcceEEEEeCCCC--CcC--CC--CCCCCCCHHHHHHHHH
Q 017180 90 SKNILMIPTISDVS-TVE--------EWRLVAQDIVQRVGKVNWRATIVDWPG--LGY--SD--RPKMDYNADVMEKFVV 154 (376)
Q Consensus 90 ~~~vvllHG~~~~~-~~~--------~~~~~~~~L~~~~~~~~~~Vi~~D~~G--~G~--S~--~~~~~~~~~~~~~~l~ 154 (376)
-|++|+|||.+... +.. .|+ ...|+.. .+.=|+.+.||= +|. +. .....+.+.|....|.
T Consensus 98 lPV~V~iHGG~f~~Gs~~~~~~~~~~~~d--g~~la~~---~~vIvVt~nYRlg~~GFl~~~~~~~~gN~Gl~Dq~~AL~ 172 (579)
T d2bcea_ 98 LPVMIWIYGGAFLMGASQGANFLSNYLYD--GEEIATR---GNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIA 172 (579)
T ss_dssp EEEEEECCCCSEEEC-------CTTGGGC--CHHHHHH---HTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHH
T ss_pred CcEEEEECCCcccCCCCCCcccCCccccc--hhhhhcc---CCEEEEeecccccccccccccccCCCccchhhHHHHHHH
Confidence 47899999976221 111 121 1233332 058899999883 121 11 1224556666666555
Q ss_pred HH---HhCCCCCCCCCCCcEEEEecchHHHHHHHHHH--hCCCCcceEEEeccCC
Q 017180 155 DL---INAPDSPVSSSESDLVIFGGGHAATLTVRAAK--KNLVKPTAIAAVAPTW 204 (376)
Q Consensus 155 ~~---l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~--~~p~~v~~lvl~~p~~ 204 (376)
.+ |...| +...+|.|+|+|.||..+..+.. .....+++.|+.++..
T Consensus 173 WV~~nI~~FG----GDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 173 WVKRNIEAFG----GDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HHHHHGGGGT----EEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred HHhhhhhhhc----cCcCceEeeecccccchhhhhhhhhcccCccccceeccCCc
Confidence 44 55555 33567999999999999887666 3345799999998643
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=95.46 E-value=0.0071 Score=49.18 Aligned_cols=22 Identities=27% Similarity=0.382 Sum_probs=19.6
Q ss_pred CCcEEEEecchHHHHHHHHHHh
Q 017180 168 ESDLVIFGGGHAATLTVRAAKK 189 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~~ 189 (376)
..++++.|||+||.+|..+|..
T Consensus 136 ~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 136 NYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred CceEEEeccchHHHHHHHHHHH
Confidence 5689999999999999998873
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=95.40 E-value=0.0081 Score=48.66 Aligned_cols=21 Identities=10% Similarity=0.156 Sum_probs=19.1
Q ss_pred CCcEEEEecchHHHHHHHHHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
..++++.|||+||.+|..+|.
T Consensus 132 ~~~i~vtGHSLGGAlA~L~a~ 152 (265)
T d1lgya_ 132 TYKVIVTGHSLGGAQALLAGM 152 (265)
T ss_dssp TCEEEEEEETHHHHHHHHHHH
T ss_pred CceEEEEecccchHHHHHHHH
Confidence 568999999999999999886
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=95.40 E-value=0.011 Score=47.89 Aligned_cols=21 Identities=19% Similarity=0.238 Sum_probs=19.5
Q ss_pred CCcEEEEecchHHHHHHHHHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
..++++.|||+||.+|..++.
T Consensus 137 ~~~i~vtGHSLGGalA~l~a~ 157 (269)
T d1tiba_ 137 DYRVVFTGHSLGGALATVAGA 157 (269)
T ss_dssp TSEEEEEEETHHHHHHHHHHH
T ss_pred CcceeeeccchHHHHHHHHHH
Confidence 568999999999999999988
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=95.34 E-value=0.0085 Score=48.57 Aligned_cols=21 Identities=10% Similarity=0.097 Sum_probs=19.2
Q ss_pred CCcEEEEecchHHHHHHHHHH
Q 017180 168 ESDLVIFGGGHAATLTVRAAK 188 (376)
Q Consensus 168 ~~~~~lvG~S~Gg~ia~~~a~ 188 (376)
..++++.|||+||.+|..+|.
T Consensus 131 ~~~i~vtGHSLGGAlA~L~a~ 151 (265)
T d3tgla_ 131 SYKVAVTGHSLGGATVLLCAL 151 (265)
T ss_dssp TSEEEEEEETHHHHHHHHHHH
T ss_pred CceEEEecccchHHHHHHHHH
Confidence 678999999999999999876
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=95.12 E-value=0.026 Score=51.23 Aligned_cols=111 Identities=8% Similarity=-0.083 Sum_probs=64.2
Q ss_pred CCcEEEecCCCCC-ccchHhHHHHHHHHhhhCCcceEEEEeCCCC--CcC--------C---CCCCCCCCHHHHHHHHHH
Q 017180 90 SKNILMIPTISDV-STVEEWRLVAQDIVQRVGKVNWRATIVDWPG--LGY--------S---DRPKMDYNADVMEKFVVD 155 (376)
Q Consensus 90 ~~~vvllHG~~~~-~~~~~~~~~~~~L~~~~~~~~~~Vi~~D~~G--~G~--------S---~~~~~~~~~~~~~~~l~~ 155 (376)
-|++|+|||.+.. ++......-...|+.. .+.=|+.+.||= +|. + +.....+.+.|....|..
T Consensus 139 lPV~V~ihGG~f~~Gs~~~~~~~~~~l~~~---~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~W 215 (571)
T d1dx4a_ 139 LPILIWIYGGGFMTGSATLDIYNADIMAAV---GNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRW 215 (571)
T ss_dssp EEEEEEECCSTTTCCCTTCGGGCCHHHHHH---HTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCccCCCCcccccchhhhhhc---CCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHHH
Confidence 4789999997532 1221111122334332 057778888872 121 1 111235666666666655
Q ss_pred HHhCCCCCCCCCCCcEEEEecchHHHHHHHHHH--hCCCCcceEEEeccCC
Q 017180 156 LINAPDSPVSSSESDLVIFGGGHAATLTVRAAK--KNLVKPTAIAAVAPTW 204 (376)
Q Consensus 156 ~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~a~--~~p~~v~~lvl~~p~~ 204 (376)
+-+.+. ...+...+|.|+|+|.||..+..+.. .....+.++|+.++..
T Consensus 216 V~~nI~-~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~ 265 (571)
T d1dx4a_ 216 LKDNAH-AFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 265 (571)
T ss_dssp HHHSTG-GGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHhhh-hhccCCCceEeccccCccceeeeeeccccccccccccceecccc
Confidence 543331 11134568999999999999887665 2335788999987643
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=91.79 E-value=0.45 Score=35.93 Aligned_cols=86 Identities=13% Similarity=0.009 Sum_probs=50.8
Q ss_pred HHHHHHHhhhCCcceEEEEeCCCCCc---CCCCC--CCCCCHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHH
Q 017180 110 LVAQDIVQRVGKVNWRATIVDWPGLG---YSDRP--KMDYNADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTV 184 (376)
Q Consensus 110 ~~~~~L~~~~~~~~~~Vi~~D~~G~G---~S~~~--~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~ 184 (376)
.+.+.|....+.....+..++++--. ..... ........+.+.+.+..++= +..+++|+|+|.|+.++-
T Consensus 38 ~~~~~l~~~~~~~~v~~~~v~~~y~a~~~~~~~~~~s~~~G~~~~~~~i~~~a~~C------P~tkiVL~GYSQGA~V~~ 111 (197)
T d1cexa_ 38 SIASNLESAFGKDGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKC------PDATLIAGGYSQGAALAA 111 (197)
T ss_dssp HHHHHHHHHHCTTTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHC------TTCEEEEEEETHHHHHHH
T ss_pred HHHHHHHHhcCCCcceEeeeccccccccccccccccchhHHHHHHHHHHHHHHhhC------CCCeEEEeeeccccHhhh
Confidence 35555555443335667777655321 11000 01112334455555555554 367999999999999999
Q ss_pred HHHHhC----CCCcceEEEec
Q 017180 185 RAAKKN----LVKPTAIAAVA 201 (376)
Q Consensus 185 ~~a~~~----p~~v~~lvl~~ 201 (376)
.++..- .++|.+++++.
T Consensus 112 ~~~~~l~~~~~~~V~avvlfG 132 (197)
T d1cexa_ 112 ASIEDLDSAIRDKIAGTVLFG 132 (197)
T ss_dssp HHHHHSCHHHHTTEEEEEEES
T ss_pred cccccCChhhhhhEEEEEEEe
Confidence 888743 35788888875
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=91.15 E-value=0.54 Score=35.86 Aligned_cols=71 Identities=15% Similarity=0.209 Sum_probs=41.1
Q ss_pred HHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCC--C----HHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHH
Q 017180 110 LVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDY--N----ADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATL 182 (376)
Q Consensus 110 ~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~--~----~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~i 182 (376)
.++..+.+... +-.+..++||..-... .....| + ...+.+.+.+..++= +..+++|+|+|.|+.+
T Consensus 24 ~~~~~~~~~~~--~~~~~~v~YPA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~C------P~tkivl~GYSQGA~V 95 (207)
T d1qoza_ 24 TVVNLVIQAHP--GTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSC------PDTQLVLVGYSQGAQI 95 (207)
T ss_dssp HHHHHHHHHST--TEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHC------TTSEEEEEEETHHHHH
T ss_pred HHHHHHHHhCC--CCeEEEeeecccccccccccccchhhHHHHHHHHHHHHHHHHHhC------CCCeEEEEeeccchHH
Confidence 34444444322 5778889998764321 111121 1 223333344444443 3679999999999999
Q ss_pred HHHHHH
Q 017180 183 TVRAAK 188 (376)
Q Consensus 183 a~~~a~ 188 (376)
+-.++.
T Consensus 96 ~~~~l~ 101 (207)
T d1qoza_ 96 FDNALC 101 (207)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988764
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=87.87 E-value=1.9 Score=32.62 Aligned_cols=75 Identities=15% Similarity=0.176 Sum_probs=40.8
Q ss_pred HHHHHHHhhhCCcceEEEEeCCCCCcCCC-CCCCCC--CHHHHHHHHHHHHhCCCCCCCCCCCcEEEEecchHHHHHHHH
Q 017180 110 LVAQDIVQRVGKVNWRATIVDWPGLGYSD-RPKMDY--NADVMEKFVVDLINAPDSPVSSSESDLVIFGGGHAATLTVRA 186 (376)
Q Consensus 110 ~~~~~L~~~~~~~~~~Vi~~D~~G~G~S~-~~~~~~--~~~~~~~~l~~~l~~l~~~~~~~~~~~~lvG~S~Gg~ia~~~ 186 (376)
.++..+.+... +-++..++||...... .....| +..+=+..+...|+....+= +..+++|+|+|.|+.++-.+
T Consensus 24 ~~~~~~~~~~~--~~~~~~v~YpA~~~~~~~~~~~y~~Sv~~G~~~~~~~i~~~~~~C--P~tk~vl~GYSQGA~V~~~~ 99 (207)
T d1g66a_ 24 TVVNGVLSAYP--GSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQC--PSTKIVLVGYSQGGEIMDVA 99 (207)
T ss_dssp HHHHHHHHHST--TCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEETHHHHHHHHH
T ss_pred HHHHHHHHhcC--CCeeEEecccccccccccccccccccHHHHHHHHHHHHHHHHHhC--CCCcEEEEeeccccHHHHHH
Confidence 34444544433 6788899999743221 111122 22222333333333321000 25689999999999999887
Q ss_pred HH
Q 017180 187 AK 188 (376)
Q Consensus 187 a~ 188 (376)
+.
T Consensus 100 l~ 101 (207)
T d1g66a_ 100 LC 101 (207)
T ss_dssp HH
T ss_pred Hh
Confidence 64
|