Citrus Sinensis ID: 017188

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-----
MPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVMDLLNLRIPPYIRIDLLQIIVTQSLSSDKKFVNWTLRITSVHGQTAQLPFIKSVEVSFSDRQKYKEASLDKQPFQLKRRTVINETFDIKLKLNFSDGCGCPCTQINIPFDFKVPPKCFELDKDDIFQRLRETAFQDLGCGQNEVIERKVLSSPKSEVTVYAIVSNVKTFESNCLSNGDLKWLKDGVNGTETSKKRSNSRKRKSRS
cccHHHHHHHHHHHcccccEEEEccccHHHHHcccccccEEEEcccccccccccccccccccHHHHHcccccccccccccccccEEEccEEEccccccHHHHHHHHHHHHHccEEEEEcccccccccccccHHHHHccccEEEEccccccccccEEEEEEccHHHHHHHHHHHHcccccccccccccEEEEEEEcccccccEEEEEEEEEEcccccccccEEEEEEEcccccccccccccccccEEEEEEcccccEEEEEEEEEccccccccccccEEEEEEcccccccccHHHHHHHHHHHHHHccccccccEEEEccccccccccEEEEEEEEEEEccccccccccccccccccccccccccccccccccccc
cccHHHHHHHHHHHcccEEEEEEcccccHHHHHccccccEEEEccccEEEEHHHcccccccHHHHHHcccccccccccccccccEEEEEEccccccccHHHHHHHHHHHHHccEEEEEccccccccHHHHHHHHHHcccEEEEEcccccccHHHccEEEcccHHHHHHHHHHHHcccccccccccEEEEEEEEccccccEEEEEEEEEEccccccccccEEEEEEEEcccccccccEEcccccccEEEEccccccEEEEEEEEEccccccccEEEEEEEEEEEccccccccHHHHHHHHHHHHHHccccccccEEEEcccccccccEEEEEEEEEEEEEcccHcccccccccccccccccccccccccccccccc
MPGMTHMALVELEKAGILKFVISqnvdglhlrsgipreklaelhgnsfmeacpscgseyfrdfevetiglketsrrcsdlkcgaKLRDTVldwedalppkemnpaekhckIADVVLCLgtslqitpacnlplkclrgggkIVIVNLqktpkdkkasLVIHGFVDKVVAGVMDLlnlrippyiriDLLQIIVTQSLSSDKKFVNWTLRITSVhgqtaqlpfiksvEVSFSDRQkykeasldkqpfqlkrrtVINETFDIKLKlnfsdgcgcpctqinipfdfkvppkcfeldkdDIFQRLRETAFqdlgcgqnevierkvlsspkseVTVYAIVSNVKtfesnclsngdlkwlkdgvngtetskkrsnsrkrksrs
MPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDFEVETIglketsrrcsdlkcgaKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLqktpkdkkaslvIHGFVDKVVAGVMDLLNLRIPPYIRIDLLQIIVTQSLSSDKKFVNWTLRITsvhgqtaqlpfiKSVEVSFSDRQKYkeasldkqpfqlkrrtVINETFDIKLKLNFSDGCGCPCTQINIPFDFKVPPKCFELDKDDIFQRLRETAfqdlgcgqnevierkvlsspkseVTVYAIVSNvktfesnclsngdlkwlkdgvngtetskkrsnsrkrksrs
MPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVMDLLNLRIPPYIRIDLLQIIVTQSLSSDKKFVNWTLRITSVHGQTAQLPFIKSVEVSFSDRQKYKEASLDKQPFQLKRRTVINETFDIKLKLNFSDGCGCPCTQINIPFDFKVPPKCFELDKDDIFQRLRETAFQDLGCGQNEVIERKVLSSPKSEVTVYAIVSNVKTFESNCLSNGDLKWLKDGVNGTETskkrsnsrkrksrs
******MALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDAL*******AEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVMDLLNLRIPPYIRIDLLQIIVTQSLSSDKKFVNWTLRITSVHGQTAQLPFIKSVEVSFS*************PFQLKRRTVINETFDIKLKLNFSDGCGCPCTQINIPFDFKVPPKCFELDKDDIFQRLRETAFQDLGCGQNEVIERKVLSSPKSEVTVYAIVSNVKTFESNCLSNGDLKWLKD*********************
MPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVMDLLNLRIPPYIRIDLLQIIVTQSLSSDKKFVNWTLRITSVHGQTAQLPF*******************DKQPFQLKRRTVINETFDIKLKLNFSDGCGCPCTQINIPFDFKVPPKCFELDKDDIFQRLR***********************KSEVTVYAIVSNVKTFESNCLS**D***************************
MPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVMDLLNLRIPPYIRIDLLQIIVTQSLSSDKKFVNWTLRITSVHGQTAQLPFIKSVEVSFSDRQKYKEASLDKQPFQLKRRTVINETFDIKLKLNFSDGCGCPCTQINIPFDFKVPPKCFELDKDDIFQRLRETAFQDLGCGQNEVIERKVLSSPKSEVTVYAIVSNVKTFESNCLSNGDLKWLKDGVN******************
MPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVMDLLNLRIPPYIRIDLLQIIVTQSLSSDKKFVNWTLRITSVHGQTAQLPFIKSVEVSFSDRQKYKEASLDKQPFQLKRRTVINETFDIKLKLNFSDGCGCPCTQINIPFDFKVPPKCFELDKDDIFQRLRETAFQDLGCGQNEVIERKVLSSPKSEVTVYAIVSNVKTFESNCLS******************************
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MPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVMDLLNLRIPPYIRIDLLQIIVTQSLSSDKKFVNWTLRITSVHGQTAQLPFIKSVEVSFSDRQKYKEASLDKQPFQLKRRTVINETFDIKLKLNFSDGCGCPCTQINIPFDFKVPPKCFELDKDDIFQRLRETAFQDLGCGQNEVIERKVLSSPKSEVTVYAIVSNVKTFESNCLSNGDLKWLKDGVNGTETSKKRSNSRKRKSRS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query375 2.2.26 [Sep-21-2011]
Q9FE17473 NAD-dependent protein dea yes no 0.992 0.786 0.704 1e-160
B8ARK7484 NAD-dependent protein dea N/A no 0.898 0.696 0.598 1e-113
P59941334 NAD-dependent protein dea no no 0.48 0.538 0.543 2e-52
Q8N6T7355 NAD-dependent protein dea yes no 0.48 0.507 0.537 3e-52
Q9VH08317 NAD-dependent protein dea yes no 0.48 0.567 0.454 2e-40
Q95Q89292 NAD-dependent protein dea yes no 0.472 0.606 0.390 3e-30
B2RZ55402 NAD-dependent protein dea no no 0.48 0.447 0.424 6e-30
Q0P595400 NAD-dependent protein dea no no 0.48 0.45 0.404 6e-30
Q9VAQ1 771 NAD-dependent protein dea no no 0.48 0.233 0.393 1e-29
Q9NRC8400 NAD-dependent protein dea no no 0.48 0.45 0.404 3e-29
>sp|Q9FE17|SIR1_ARATH NAD-dependent protein deacetylase SRT1 OS=Arabidopsis thaliana GN=SRT1 PE=2 SV=1 Back     alignment and function desciption
 Score =  564 bits (1454), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 267/379 (70%), Positives = 324/379 (85%), Gaps = 7/379 (1%)

Query: 1   MPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYF 60
           MP MTHMALVELE+AGILKFVISQNVDGLHLRSGIPREKL+ELHG+SFME CPSCG+EY 
Sbjct: 91  MPSMTHMALVELERAGILKFVISQNVDGLHLRSGIPREKLSELHGDSFMEMCPSCGAEYL 150

Query: 61  RDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGT 120
           RDFEVETIGLKETSR+CS  KCGAKL+DTVLDWEDALPPKE++PAEKHCK AD+VLCLGT
Sbjct: 151 RDFEVETIGLKETSRKCSVEKCGAKLKDTVLDWEDALPPKEIDPAEKHCKKADLVLCLGT 210

Query: 121 SLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVMDLLNLRIPP 180
           SLQITPACNLPLKCL+GGGKIVIVNLQKTPKDKKA++VIHG VDKVVAGVM+ LN++IPP
Sbjct: 211 SLQITPACNLPLKCLKGGGKIVIVNLQKTPKDKKANVVIHGLVDKVVAGVMESLNMKIPP 270

Query: 181 YIRIDLLQIIVTQSLSSDKKFVNWTLRITSVHGQTAQLPFIKSVEVSFSDRQKYKEASLD 240
           Y+RIDL QII+TQS+S D++F+NWTLR+ SVHG T+QLPFIKS+EVSFSD   YK+A LD
Sbjct: 271 YVRIDLFQIILTQSISGDQRFINWTLRVASVHGLTSQLPFIKSIEVSFSDNHNYKDAVLD 330

Query: 241 KQPFQLKRRTVINETFDIKLKLNFSDGCGCPCTQINIPFDFKVPPKCFE--LDKDDIFQR 298
           KQPF +KRRT  NETFDI  K+N+SDGC C  TQ+++PF+FK+  +     +DK+ + Q 
Sbjct: 331 KQPFLMKRRTARNETFDIFFKVNYSDGCDCVSTQLSLPFEFKISTEEHVEIIDKEAVLQS 390

Query: 299 LRETAFQDLGCGQNEVIERKVLSSPKSEVTVYAIVSNVKTFES--NCLSNGDLKWLKDGV 356
           LRE A ++  CGQ+ V+ER+V+S P+SE  VYA V++++T+ S  + L+NGDLKW    +
Sbjct: 391 LREKAVEESSCGQSGVVERRVVSEPRSEAVVYATVTSLRTYHSQQSLLANGDLKW---KL 447

Query: 357 NGTETSKKRSNSRKRKSRS 375
            G+ TS+KRS + KRKS++
Sbjct: 448 EGSGTSRKRSRTGKRKSKA 466
NAD-dependent protein deacetylase. Has deacetylase activity towards H3K9Ac. May have a function in the safeguard against genome instabiliy and DNA damage to ensure plant cell growth.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: -
>sp|B8ARK7|SIR1_ORYSI NAD-dependent protein deacetylase SRT1 OS=Oryza sativa subsp. indica GN=SRT1 PE=2 SV=1 Back     alignment and function description
>sp|P59941|SIR6_MOUSE NAD-dependent protein deacetylase sirtuin-6 OS=Mus musculus GN=Sirt6 PE=1 SV=1 Back     alignment and function description
>sp|Q8N6T7|SIR6_HUMAN NAD-dependent protein deacetylase sirtuin-6 OS=Homo sapiens GN=SIRT6 PE=1 SV=2 Back     alignment and function description
>sp|Q9VH08|SIR6_DROME NAD-dependent protein deacetylase Sirt6 OS=Drosophila melanogaster GN=Sirt6 PE=2 SV=1 Back     alignment and function description
>sp|Q95Q89|SIR24_CAEEL NAD-dependent protein deacetylase sir-2.4 OS=Caenorhabditis elegans GN=sir-2.4 PE=3 SV=2 Back     alignment and function description
>sp|B2RZ55|SIR7_RAT NAD-dependent protein deacetylase sirtuin-7 OS=Rattus norvegicus GN=Sirt7 PE=2 SV=1 Back     alignment and function description
>sp|Q0P595|SIR7_BOVIN NAD-dependent protein deacetylase sirtuin-7 OS=Bos taurus GN=SIRT7 PE=2 SV=1 Back     alignment and function description
>sp|Q9VAQ1|SIR7_DROME NAD-dependent protein deacetylase Sirt7 OS=Drosophila melanogaster GN=Sirt7 PE=1 SV=2 Back     alignment and function description
>sp|Q9NRC8|SIR7_HUMAN NAD-dependent protein deacetylase sirtuin-7 OS=Homo sapiens GN=SIRT7 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query375
255563480466 chromatin regulatory protein sir2, putat 0.997 0.802 0.786 1e-174
224056465464 histone deacetylase [Populus trichocarpa 0.994 0.803 0.764 1e-168
225461927467 PREDICTED: NAD-dependent deacetylase sir 1.0 0.802 0.750 1e-161
356524368 574 PREDICTED: NAD-dependent deacetylase sir 0.992 0.648 0.722 1e-161
359466799467 sirtuin 1 [Vitis vinifera] 1.0 0.802 0.745 1e-161
297793049473 hypothetical protein ARALYDRAFT_495661 [ 0.992 0.786 0.709 1e-159
356566429 479 PREDICTED: NAD-dependent deacetylase sir 0.954 0.747 0.739 1e-158
15240574473 sirtuin 1 [Arabidopsis thaliana] gi|7526 0.992 0.786 0.704 1e-158
31711700473 At5g55760 [Arabidopsis thaliana] gi|1107 0.992 0.786 0.704 1e-158
297790063473 hypothetical protein ARALYDRAFT_497237 [ 0.992 0.786 0.707 1e-158
>gi|255563480|ref|XP_002522742.1| chromatin regulatory protein sir2, putative [Ricinus communis] gi|223537980|gb|EEF39593.1| chromatin regulatory protein sir2, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  618 bits (1594), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 295/375 (78%), Positives = 332/375 (88%), Gaps = 1/375 (0%)

Query: 1   MPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYF 60
           MP +THMALVELE+AGI+KF+ISQNVDGLHLRSGIPREKLAELHGNSFME+CPSCG+EYF
Sbjct: 91  MPSITHMALVELERAGIVKFIISQNVDGLHLRSGIPREKLAELHGNSFMESCPSCGAEYF 150

Query: 61  RDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGT 120
           RDFEVETIGLKETSRRCSD+KCGAKLRDTVLDWEDALPPKEM PAEKHC++ D+VLCLGT
Sbjct: 151 RDFEVETIGLKETSRRCSDVKCGAKLRDTVLDWEDALPPKEMLPAEKHCRMGDLVLCLGT 210

Query: 121 SLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVMDLLNLRIPP 180
           SLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKV+AGVM LL+++IPP
Sbjct: 211 SLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVIAGVMHLLSMQIPP 270

Query: 181 YIRIDLLQIIVTQSLSSDKKFVNWTLRITSVHGQTAQLPFIKSVEVSFSDRQKYKEASLD 240
           Y+RIDLLQIIVT+SLS+DK+FVNWTLRI SVH   A LPFIKS+EV+FSD QKYK A L 
Sbjct: 271 YVRIDLLQIIVTRSLSADKRFVNWTLRIASVHALKATLPFIKSIEVTFSDTQKYKAAILH 330

Query: 241 KQPFQLKRRTVINETFDIKLKLNFSDGCGCPCTQINIPFDFKVPPKCFELDKDDIFQRLR 300
           +QPF LKRRTV  E+F+I LKLN SDGCGC CTQINIPF FKV   CF L KD + Q LR
Sbjct: 331 EQPFNLKRRTVTTESFEIFLKLNLSDGCGCLCTQINIPFGFKVLNDCFNLKKDSVIQNLR 390

Query: 301 ETAFQDLGCGQNEVIERKVLSSPKSEVTVYAIVSNVKTFESNCLSNGDLKWLK-DGVNGT 359
           E A Q LGCGQN +IERK + +P+SEVTV+AIV+N+K FES+ LSNG++K L+   +NG 
Sbjct: 391 EKAIQVLGCGQNAMIERKTIIAPRSEVTVHAIVTNIKAFESDGLSNGEVKRLRGSSINGI 450

Query: 360 ETSKKRSNSRKRKSR 374
            T +KRSNSRKRKSR
Sbjct: 451 MTCRKRSNSRKRKSR 465

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224056465|ref|XP_002298870.1| histone deacetylase [Populus trichocarpa] gi|222846128|gb|EEE83675.1| histone deacetylase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225461927|ref|XP_002265837.1| PREDICTED: NAD-dependent deacetylase sirtuin-6 [Vitis vinifera] gi|296089923|emb|CBI39742.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356524368|ref|XP_003530801.1| PREDICTED: NAD-dependent deacetylase sirtuin-7-like [Glycine max] Back     alignment and taxonomy information
>gi|359466799|gb|AEV46830.1| sirtuin 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297793049|ref|XP_002864409.1| hypothetical protein ARALYDRAFT_495661 [Arabidopsis lyrata subsp. lyrata] gi|297310244|gb|EFH40668.1| hypothetical protein ARALYDRAFT_495661 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356566429|ref|XP_003551434.1| PREDICTED: NAD-dependent deacetylase sirtuin-6-like [Glycine max] Back     alignment and taxonomy information
>gi|15240574|ref|NP_200387.1| sirtuin 1 [Arabidopsis thaliana] gi|75262309|sp|Q9FE17.1|SIR1_ARATH RecName: Full=NAD-dependent protein deacetylase SRT1; AltName: Full=Regulatory protein SIR2 homolog 1; AltName: Full=SIR2-like protein 1 gi|12006420|gb|AAG44850.1|AF283757_1 sir2-like protein [Arabidopsis thaliana] gi|9758610|dbj|BAB09243.1| transcription regulator Sir2-like protein [Arabidopsis thaliana] gi|332009294|gb|AED96677.1| sirtuin 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|31711700|gb|AAP68206.1| At5g55760 [Arabidopsis thaliana] gi|110743087|dbj|BAE99436.1| transcription regulator Sir2-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297790063|ref|XP_002862943.1| hypothetical protein ARALYDRAFT_497237 [Arabidopsis lyrata subsp. lyrata] gi|297308724|gb|EFH39202.1| hypothetical protein ARALYDRAFT_497237 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query375
TAIR|locus:2162112473 SRT1 "AT5G55760" [Arabidopsis 0.954 0.756 0.719 1.4e-142
UNIPROTKB|F1P0C4357 SIRT6 "Uncharacterized protein 0.568 0.596 0.488 2.8e-50
RGD|1305216330 Sirt6 "sirtuin 6" [Rattus norv 0.48 0.545 0.548 3.6e-50
MGI|MGI:1354161334 Sirt6 "sirtuin 6 (silent matin 0.48 0.538 0.543 2e-49
UNIPROTKB|B4DDV3283 SIRT6 "NAD-dependent protein d 0.48 0.636 0.537 1.1e-48
UNIPROTKB|Q8N6T7355 SIRT6 "NAD-dependent protein d 0.48 0.507 0.537 1.1e-48
UNIPROTKB|E2QXD9361 SIRT6 "Uncharacterized protein 0.48 0.498 0.532 2.3e-48
UNIPROTKB|J9NZY5289 SIRT6 "Uncharacterized protein 0.48 0.622 0.532 2.3e-48
UNIPROTKB|A5D7K6359 SIRT6 "SIRT6 protein" [Bos tau 0.48 0.501 0.532 9.8e-48
ZFIN|ZDB-GENE-031007-2354 sirt6 "sirtuin (silent mating 0.48 0.508 0.510 1.1e-46
TAIR|locus:2162112 SRT1 "AT5G55760" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1394 (495.8 bits), Expect = 1.4e-142, P = 1.4e-142
 Identities = 261/363 (71%), Positives = 314/363 (86%)

Query:     1 MPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYF 60
             MP MTHMALVELE+AGILKFVISQNVDGLHLRSGIPREKL+ELHG+SFME CPSCG+EY 
Sbjct:    91 MPSMTHMALVELERAGILKFVISQNVDGLHLRSGIPREKLSELHGDSFMEMCPSCGAEYL 150

Query:    61 RDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGT 120
             RDFEVETIGLKETSR+CS  KCGAKL+DTVLDWEDALPPKE++PAEKHCK AD+VLCLGT
Sbjct:   151 RDFEVETIGLKETSRKCSVEKCGAKLKDTVLDWEDALPPKEIDPAEKHCKKADLVLCLGT 210

Query:   121 SLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVMDLLNLRIPP 180
             SLQITPACNLPLKCL+GGGKIVIVNLQKTPKDKKA++VIHG VDKVVAGVM+ LN++IPP
Sbjct:   211 SLQITPACNLPLKCLKGGGKIVIVNLQKTPKDKKANVVIHGLVDKVVAGVMESLNMKIPP 270

Query:   181 YIRIDLLQIIVTQSLSSDKKFVNWTLRITSVHGQTAQLPFIKSVEVSFSDRQKYKEASLD 240
             Y+RIDL QII+TQS+S D++F+NWTLR+ SVHG T+QLPFIKS+EVSFSD   YK+A LD
Sbjct:   271 YVRIDLFQIILTQSISGDQRFINWTLRVASVHGLTSQLPFIKSIEVSFSDNHNYKDAVLD 330

Query:   241 KQPFQLKRRTVINETFDIKLKLNFSDGCGCPCTQINIPFDFKVPPK-CFEL-DKDDIFQR 298
             KQPF +KRRT  NETFDI  K+N+SDGC C  TQ+++PF+FK+  +   E+ DK+ + Q 
Sbjct:   331 KQPFLMKRRTARNETFDIFFKVNYSDGCDCVSTQLSLPFEFKISTEEHVEIIDKEAVLQS 390

Query:   299 LRETAFQDLGCGQNEVIERKVLSSPKSEVTVYAIVSNVKTFES--NCLSNGDLKWLKDGV 356
             LRE A ++  CGQ+ V+ER+V+S P+SE  VYA V++++T+ S  + L+NGDLKW  +G 
Sbjct:   391 LREKAVEESSCGQSGVVERRVVSEPRSEAVVYATVTSLRTYHSQQSLLANGDLKWKLEG- 449

Query:   357 NGT 359
             +GT
Sbjct:   450 SGT 452
GO:0003677 "DNA binding" evidence=ISS
GO:0005677 "chromatin silencing complex" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0006342 "chromatin silencing" evidence=ISS
GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS
GO:0006476 "protein deacetylation" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0070403 "NAD+ binding" evidence=IEA
UNIPROTKB|F1P0C4 SIRT6 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|1305216 Sirt6 "sirtuin 6" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1354161 Sirt6 "sirtuin 6 (silent mating type information regulation 2, homolog) 6 (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|B4DDV3 SIRT6 "NAD-dependent protein deacetylase sirtuin-6" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q8N6T7 SIRT6 "NAD-dependent protein deacetylase sirtuin-6" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2QXD9 SIRT6 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|J9NZY5 SIRT6 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|A5D7K6 SIRT6 "SIRT6 protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-031007-2 sirt6 "sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FE17SIR1_ARATH3, ., 5, ., 1, ., -0.70440.9920.7864yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query375
cd01410206 cd01410, SIRT7, SIRT7: Eukaryotic and prokaryotic 3e-92
cd01407218 cd01407, SIR2-fam, SIR2 family of proteins include 2e-61
cd00296222 cd00296, SIR2, SIR2 superfamily of proteins includ 9e-53
PRK00481242 PRK00481, PRK00481, NAD-dependent deacetylase; Pro 2e-37
cd01413222 cd01413, SIR2_Af2, SIR2_Af2: Archaeal and prokaryo 5e-36
COG0846250 COG0846, SIR2, NAD-dependent protein deacetylases, 1e-34
PRK14138244 PRK14138, PRK14138, NAD-dependent deacetylase; Pro 3e-29
cd01412224 cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryoti 3e-29
pfam02146177 pfam02146, SIR2, Sir2 family 9e-24
cd01411225 cd01411, SIR2H, SIR2H: Uncharacterized prokaryotic 2e-23
PTZ00409271 PTZ00409, PTZ00409, Sir2 (Silent Information Regul 6e-23
cd01409260 cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic 5e-20
cd01408235 cd01408, SIRT1, SIRT1: Eukaryotic group (class1) w 5e-15
PTZ00408242 PTZ00408, PTZ00408, NAD-dependent deacetylase; Pro 3e-12
PTZ00410349 PTZ00410, PTZ00410, NAD-dependent SIR2; Provisiona 3e-10
PRK05333285 PRK05333, PRK05333, NAD-dependent deacetylase; Pro 4e-08
>gnl|CDD|238701 cd01410, SIRT7, SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information 
 Score =  274 bits (704), Expect = 3e-92
 Identities = 107/161 (66%), Positives = 123/161 (76%), Gaps = 2/161 (1%)

Query: 1   MPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYF 60
            P +THMALVELE+AG+LKFVISQNVDGLHLRSG+PREKL+ELHGN F+E C SCG EY 
Sbjct: 47  EPTLTHMALVELERAGLLKFVISQNVDGLHLRSGLPREKLSELHGNMFIEVCKSCGPEYV 106

Query: 61  RDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGT 120
           RD  VET G KET RRC    CG  L+DT++D+ + LPP+    A      AD+ LCLGT
Sbjct: 107 RDDVVETRGDKETGRRCH--ACGGILKDTIVDFGERLPPENWMGAAAAACRADLFLCLGT 164

Query: 121 SLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHG 161
           SLQ+TPA NLPLK  R GG++VIVNLQ TPKDK A LVIHG
Sbjct: 165 SLQVTPAANLPLKAARAGGRLVIVNLQPTPKDKLADLVIHG 205

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. Length = 206
>gnl|CDD|238698 cd01407, SIR2-fam, SIR2 family of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>gnl|CDD|238184 cd00296, SIR2, SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>gnl|CDD|234777 PRK00481, PRK00481, NAD-dependent deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|238704 cd01413, SIR2_Af2, SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, Sulfolobus solfataricus ssSir2, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|223915 COG0846, SIR2, NAD-dependent protein deacetylases, SIR2 family [Transcription] Back     alignment and domain information
>gnl|CDD|172627 PRK14138, PRK14138, NAD-dependent deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|238703 cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E Back     alignment and domain information
>gnl|CDD|216902 pfam02146, SIR2, Sir2 family Back     alignment and domain information
>gnl|CDD|238702 cd01411, SIR2H, SIR2H: Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species and Fusobacteria; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|173599 PTZ00409, PTZ00409, Sir2 (Silent Information Regulator) protein; Provisional Back     alignment and domain information
>gnl|CDD|238700 cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|238699 cd01408, SIRT1, SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|240405 PTZ00408, PTZ00408, NAD-dependent deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|185600 PTZ00410, PTZ00410, NAD-dependent SIR2; Provisional Back     alignment and domain information
>gnl|CDD|235415 PRK05333, PRK05333, NAD-dependent deacetylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 375
KOG1905353 consensus Class IV sirtuins (SIR2 family) [Chromat 100.0
PRK14138244 NAD-dependent deacetylase; Provisional 100.0
cd01410206 SIRT7 SIRT7: Eukaryotic and prokaryotic group (cla 100.0
cd01408235 SIRT1 SIRT1: Eukaryotic group (class1) which inclu 100.0
cd01409260 SIRT4 SIRT4: Eukaryotic and prokaryotic group (cla 100.0
PTZ00409271 Sir2 (Silent Information Regulator) protein; Provi 100.0
cd01413222 SIR2_Af2 SIR2_Af2: Archaeal and prokaryotic group 100.0
PRK05333285 NAD-dependent deacetylase; Provisional 100.0
PRK00481242 NAD-dependent deacetylase; Provisional 100.0
COG0846250 SIR2 NAD-dependent protein deacetylases, SIR2 fami 100.0
cd01412224 SIRT5_Af1_CobB SIRT5_Af1_CobB: Eukaryotic, archaea 100.0
PTZ00408242 NAD-dependent deacetylase; Provisional 100.0
cd01407218 SIR2-fam SIR2 family of proteins includes silent i 100.0
PTZ00410349 NAD-dependent SIR2; Provisional 100.0
cd01411225 SIR2H SIR2H: Uncharacterized prokaryotic Sir2 homo 100.0
cd00296222 SIR2 SIR2 superfamily of proteins includes silent 100.0
PF02146178 SIR2: Sir2 family; InterPro: IPR003000 These seque 100.0
KOG2683305 consensus Sirtuin 4 and related class II sirtuins 100.0
KOG2682314 consensus NAD-dependent histone deacetylases and c 100.0
KOG2684412 consensus Sirtuin 5 and related class III sirtuins 100.0
PF00205137 TPP_enzyme_M: Thiamine pyrophosphate enzyme, centr 96.35
PF0336684 YEATS: YEATS family; InterPro: IPR005033 Named the 96.3
cd01406242 SIR2-like Sir2-like: Prokaryotic group of uncharac 96.2
PRK08322547 acetolactate synthase; Reviewed 94.07
PRK07524535 hypothetical protein; Provisional 94.02
PRK07418616 acetolactate synthase 3 catalytic subunit; Reviewe 93.89
PRK07979574 acetolactate synthase 3 catalytic subunit; Validat 93.85
PRK08979572 acetolactate synthase 3 catalytic subunit; Validat 93.8
PRK06882574 acetolactate synthase 3 catalytic subunit; Validat 93.57
TIGR01504588 glyox_carbo_lig glyoxylate carboligase. Glyoxylate 93.39
PRK07789612 acetolactate synthase 1 catalytic subunit; Validat 93.39
CHL00099585 ilvB acetohydroxyacid synthase large subunit 93.36
PRK09107595 acetolactate synthase 3 catalytic subunit; Validat 93.29
PRK06456572 acetolactate synthase catalytic subunit; Reviewed 93.21
PRK08527563 acetolactate synthase 3 catalytic subunit; Validat 93.2
PRK06154565 hypothetical protein; Provisional 93.15
TIGR02418539 acolac_catab acetolactate synthase, catabolic. Ace 93.13
PRK06466574 acetolactate synthase 3 catalytic subunit; Validat 93.13
PRK06725570 acetolactate synthase 3 catalytic subunit; Validat 93.11
PRK08327569 acetolactate synthase catalytic subunit; Validated 93.0
PLN02470585 acetolactate synthase 92.86
PRK05858542 hypothetical protein; Provisional 92.56
PRK08199557 thiamine pyrophosphate protein; Validated 92.53
TIGR03254554 oxalate_oxc oxalyl-CoA decarboxylase. In a number 92.5
PRK08266542 hypothetical protein; Provisional 92.34
PRK08978548 acetolactate synthase 2 catalytic subunit; Reviewe 92.32
PRK11269591 glyoxylate carboligase; Provisional 92.28
PRK08611576 pyruvate oxidase; Provisional 92.14
PRK06965587 acetolactate synthase 3 catalytic subunit; Validat 92.14
PRK08155564 acetolactate synthase catalytic subunit; Validated 92.1
PRK07282566 acetolactate synthase catalytic subunit; Reviewed 92.09
TIGR00118558 acolac_lg acetolactate synthase, large subunit, bi 92.08
PRK06112578 acetolactate synthase catalytic subunit; Validated 92.08
COG0028550 IlvB Thiamine pyrophosphate-requiring enzymes [ace 92.05
PRK07525588 sulfoacetaldehyde acetyltransferase; Validated 91.95
PRK06048561 acetolactate synthase 3 catalytic subunit; Reviewe 91.9
PRK09259569 putative oxalyl-CoA decarboxylase; Validated 91.88
PRK06276586 acetolactate synthase catalytic subunit; Reviewed 91.83
PRK08273597 thiamine pyrophosphate protein; Provisional 91.7
PF13289143 SIR2_2: SIR2-like domain 91.69
PRK08617552 acetolactate synthase; Reviewed 91.46
TIGR03457579 sulphoacet_xsc sulfoacetaldehyde acetyltransferase 91.43
PRK06546578 pyruvate dehydrogenase; Provisional 91.39
TIGR00173432 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohex 90.53
PRK07064544 hypothetical protein; Provisional 90.45
TIGR02720575 pyruv_oxi_spxB pyruvate oxidase. Members of this f 90.27
PLN00022356 electron transfer flavoprotein subunit alpha; Prov 89.75
PRK03363313 fixB putative electron transfer flavoprotein FixB; 89.54
PRK09124574 pyruvate dehydrogenase; Provisional 89.54
PRK11916312 electron transfer flavoprotein subunit YdiR; Provi 89.27
COG2025313 FixB Electron transfer flavoprotein, alpha subunit 88.96
PRK07710571 acetolactate synthase catalytic subunit; Reviewed 87.31
PLN02573578 pyruvate decarboxylase 86.59
KOG1185571 consensus Thiamine pyrophosphate-requiring enzyme 86.45
PRK07092530 benzoylformate decarboxylase; Reviewed 86.33
PRK06457549 pyruvate dehydrogenase; Provisional 84.88
TIGR03393539 indolpyr_decarb indolepyruvate decarboxylase, Erwi 84.82
cd02750461 MopB_Nitrate-R-NarG-like Respiratory nitrate reduc 83.9
COG3962617 Acetolactate synthase [Amino acid transport and me 83.62
cd02766501 MopB_3 The MopB_3 CD includes a group of related u 82.83
cd02759477 MopB_Acetylene-hydratase The MopB_Acetylene-hydrat 82.27
cd02765 567 MopB_4 The MopB_4 CD includes a group of related u 81.67
smart0083441 CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C 80.15
>KOG1905 consensus Class IV sirtuins (SIR2 family) [Chromatin structure and dynamics; Transcription] Back     alignment and domain information 
Probab=100.00  E-value=2.8e-48  Score=372.69  Aligned_cols=244  Identities=52%  Similarity=0.788  Sum_probs=222.1

Q ss_pred             CCCHHHHHHHHHHHcCCccEEEecCcchhHhhcCCCCCCeEEecCCccccccCCCCCcccchhhhhhhcccCcCCCCCCc
Q 017188            1 MPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDFEVETIGLKETSRRCSDL   80 (375)
Q Consensus         1 ~PN~aH~aLa~Lek~G~l~~VITQNIDGLH~kAG~p~~kViELHGnl~~~~C~~C~~~y~~d~~v~~i~~~~~~P~Cp~~   80 (375)
                      .|+.+||+|.+|++.|++++||||||||||.|+|+|+++++|||||||.+.|.+|..+|.++..+.+++.+.+.+.|...
T Consensus       100 rPt~THmai~~Lhr~gll~~viSQNvDGLhlrsGlPr~~LsElHGNmfiEvC~sC~~~yvr~~~v~t~gl~at~R~ct~~  179 (353)
T KOG1905|consen  100 RPTVTHMAIVALHRAGLLKHVISQNVDGLHLRSGLPREKLSELHGNMFIEVCKSCRPEYVRDRVVDTVGLKATGRHCTGR  179 (353)
T ss_pred             CCcchHHHHHHHHHcchhhhhhhccccchhhccCCCHHHHHHHhcchHHHHhhhhcccceehhheeeccccccccccccc
Confidence            59999999999999999999999999999999999999999999999999999999999999888888877666555432


Q ss_pred             ------CCCccccccEEEcCCCCCccchhHHHHHhhcCCEEEEEccCccccccccchHhhhcCCCeEEEECCCCCCCCCC
Q 017188           81 ------KCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKK  154 (375)
Q Consensus        81 ------~CgG~LRP~VVlFGE~lP~~~~~~A~~~i~~aDLlLVLGTSL~V~Pa~~Lp~~a~~~G~~lIiINlq~t~~d~~  154 (375)
                            .|.|.|++.++.|...+|...|+.|.++.+.||++|++||||+|.|..++|..+.+.|+++++||+|+|+.|+.
T Consensus       180 k~~~~rscrg~l~d~~ldwe~~lpln~l~~a~~a~~~Ad~~lcLGTSLqI~p~g~lpl~~~k~g~K~~ivNlQ~T~hDk~  259 (353)
T KOG1905|consen  180 KCRKCRSCRGTLRDFGLDWEDELPLNDLDRATKAAKRADLILCLGTSLQILPKGNLPLKMKKRGGKIVIVNLQWTPHDKI  259 (353)
T ss_pred             ccccccccccchhhccccccccCCchhhHHHHHHhhhcceEEEeccceEeeeCCCcchhHhccCceEEEEeCccCcccch
Confidence                  35578899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEeccHHHHHHHHHHHhccCCCCccc-hhhhhhhhhhccCCCCccccceEEeeeccCCCCccccceeeeeecCCccc
Q 017188          155 ASLVIHGFVDKVVAGVMDLLNLRIPPYIR-IDLLQIIVTQSLSSDKKFVNWTLRITSVHGQTAQLPFIKSVEVSFSDRQK  233 (375)
Q Consensus       155 adl~I~g~~devL~~L~~~L~~~iP~~~~-~~~~~~~l~~~~~~~~~~~~w~l~~~~~~~~~~~~~~l~~~~v~~~~~~~  233 (375)
                      |++.|+|++|.||..||+.||++||+|++ .|++++.++.+.........|.+...++++...+.+|+..+.        
T Consensus       260 A~l~Ihg~vd~Vm~~lm~~LgveIp~y~~~~d~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  331 (353)
T KOG1905|consen  260 ANLKIHGKVDLVMASLMELLGVEIPAYDRLPDPIFILLTLSRPGEEHTIPQPLLKNSVEETTKQEPFISTIS--------  331 (353)
T ss_pred             hheeehhhHHHHHHHHHHHhCCCCCcccCCCcccccccccCCCCccccccccccccccccCCCCCccccccc--------
Confidence            99999999999999999999999999997 688888877777677788999999999999888899998887        


Q ss_pred             cccccccCCCceeEeeeeccc
Q 017188          234 YKEASLDKQPFQLKRRTVINE  254 (375)
Q Consensus       234 ~~~~~~~~~p~~~~~~~~~~~  254 (375)
                        +.++.+|++...++....+
T Consensus       332 --spi~~~~~~~~~~k~~rr~  350 (353)
T KOG1905|consen  332 --SPILKGPRIRTPIKNGRRV  350 (353)
T ss_pred             --cccccCCCCcCCccCcccc
Confidence              1489999998876665543

>PRK14138 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>cd01410 SIRT7 SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>cd01408 SIRT1 SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>cd01409 SIRT4 SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>PTZ00409 Sir2 (Silent Information Regulator) protein; Provisional Back     alignment and domain information
>cd01413 SIR2_Af2 SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, Sulfolobus solfataricus ssSir2, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>PRK05333 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>PRK00481 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>COG0846 SIR2 NAD-dependent protein deacetylases, SIR2 family [Transcription] Back     alignment and domain information
>cd01412 SIRT5_Af1_CobB SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E Back     alignment and domain information
>PTZ00408 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>cd01407 SIR2-fam SIR2 family of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>PTZ00410 NAD-dependent SIR2; Provisional Back     alignment and domain information
>cd01411 SIR2H SIR2H: Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species and Fusobacteria; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>cd00296 SIR2 SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>PF02146 SIR2: Sir2 family; InterPro: IPR003000 These sequences represent the Sirtuin (Sir2-related) family of NAD+-dependent deacetylases Back     alignment and domain information
>KOG2683 consensus Sirtuin 4 and related class II sirtuins (SIR2 family) [Chromatin structure and dynamics; Transcription] Back     alignment and domain information
>KOG2682 consensus NAD-dependent histone deacetylases and class I sirtuins (SIR2 family) [Chromatin structure and dynamics; Transcription] Back     alignment and domain information
>KOG2684 consensus Sirtuin 5 and related class III sirtuins (SIR2 family) [Chromatin structure and dynamics; Transcription] Back     alignment and domain information
>PF00205 TPP_enzyme_M: Thiamine pyrophosphate enzyme, central domain; InterPro: IPR012000 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>PF03366 YEATS: YEATS family; InterPro: IPR005033 Named the YEATS family, after `YNK7', `ENL', `AF-9', and `TFIIF small subunit', this family also contains the GAS41 protein Back     alignment and domain information
>cd01406 SIR2-like Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>PRK08322 acetolactate synthase; Reviewed Back     alignment and domain information
>PRK07524 hypothetical protein; Provisional Back     alignment and domain information
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR01504 glyox_carbo_lig glyoxylate carboligase Back     alignment and domain information
>PRK07789 acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>CHL00099 ilvB acetohydroxyacid synthase large subunit Back     alignment and domain information
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06456 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06154 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02418 acolac_catab acetolactate synthase, catabolic Back     alignment and domain information
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK08327 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PLN02470 acetolactate synthase Back     alignment and domain information
>PRK05858 hypothetical protein; Provisional Back     alignment and domain information
>PRK08199 thiamine pyrophosphate protein; Validated Back     alignment and domain information
>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase Back     alignment and domain information
>PRK08266 hypothetical protein; Provisional Back     alignment and domain information
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed Back     alignment and domain information
>PRK11269 glyoxylate carboligase; Provisional Back     alignment and domain information
>PRK08611 pyruvate oxidase; Provisional Back     alignment and domain information
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK08155 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK07282 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type Back     alignment and domain information
>PRK06112 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated Back     alignment and domain information
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PRK09259 putative oxalyl-CoA decarboxylase; Validated Back     alignment and domain information
>PRK06276 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK08273 thiamine pyrophosphate protein; Provisional Back     alignment and domain information
>PF13289 SIR2_2: SIR2-like domain Back     alignment and domain information
>PRK08617 acetolactate synthase; Reviewed Back     alignment and domain information
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase Back     alignment and domain information
>PRK06546 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase Back     alignment and domain information
>PRK07064 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase Back     alignment and domain information
>PLN00022 electron transfer flavoprotein subunit alpha; Provisional Back     alignment and domain information
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional Back     alignment and domain information
>PRK09124 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK11916 electron transfer flavoprotein subunit YdiR; Provisional Back     alignment and domain information
>COG2025 FixB Electron transfer flavoprotein, alpha subunit [Energy production and conversion] Back     alignment and domain information
>PRK07710 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PLN02573 pyruvate decarboxylase Back     alignment and domain information
>KOG1185 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>PRK07092 benzoylformate decarboxylase; Reviewed Back     alignment and domain information
>PRK06457 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>TIGR03393 indolpyr_decarb indolepyruvate decarboxylase, Erwinia family Back     alignment and domain information
>cd02750 MopB_Nitrate-R-NarG-like Respiratory nitrate reductase A (NarGHI), alpha chain (NarG) and related proteins Back     alignment and domain information
>COG3962 Acetolactate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>cd02766 MopB_3 The MopB_3 CD includes a group of related uncharacterized bacterial and archaeal molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site Back     alignment and domain information
>cd02759 MopB_Acetylene-hydratase The MopB_Acetylene-hydratase CD contains acetylene hydratase (Ahy) and other related proteins Back     alignment and domain information
>cd02765 MopB_4 The MopB_4 CD includes a group of related uncharacterized bacterial and archaeal molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site Back     alignment and domain information
>smart00834 CxxC_CXXC_SSSS Putative regulatory protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query375
3pki_A355 Human Sirt6 Crystal Structure In Complex With Adp R 2e-53
3k35_A318 Crystal Structure Of Human Sirt6 Length = 318 2e-53
1m2n_A249 Sir2 Homologues (D102gF159AR170A) MUTANT-2'-O-Acety 1e-20
1m2g_A249 Sir2 Homologue-Adp Ribose Complex Length = 249 6e-20
1m2h_A249 Sir2 Homologue S24a Mutant-adp Ribose Complex Lengt 7e-20
1yc5_A246 Sir2-P53 Peptide-Nicotinamide Length = 246 2e-19
1m2k_A249 Sir2 Homologue F159a Mutant-Adp Ribose Complex Leng 2e-19
1ici_A256 Crystal Structure Of A Sir2 Homolog-Nad Complex Len 2e-19
1m2j_A249 Sir2 Homologue H80n Mutant-Adp Ribose Complex Lengt 5e-19
2h4h_A246 Sir2 H116y Mutant-P53 Peptide-Nad Length = 246 7e-19
2h59_A246 Sir2 H116a-Deacetylated P53 Peptide-3'-O-Acetyl Adp 2e-18
1ma3_A253 Structure Of A Sir2 Enzyme Bound To An Acetylated P 1e-15
3jwp_A265 Crystal Structure Of Plasmodium Falciparum Sir2a (P 6e-13
3u31_A290 Plasmodium Falciparum Sir2a Preferentially Hydrolyz 8e-13
2b4y_A271 Crystal Structure Of Human Sirtuin Homolog 5 Length 8e-09
4hda_A275 Crystal Structure Of Human Sirt5 In Complex With Fl 1e-08
3rig_A273 Sirt5 Is An Nad-Dependent Protein Lysine Demalonyla 1e-08
4g1c_A267 Human Sirt5 Bound To Succ-Idh2 And Carba-Nad Length 1e-08
2nyr_A271 Crystal Structure Of Human Sirtuin Homolog 5 In Com 1e-08
1j8f_C323 Human Sirt2 Histone Deacetylase Length = 323 2e-08
1j8f_A323 Human Sirt2 Histone Deacetylase Length = 323 2e-08
4fvt_A274 Human Sirt3 Bound To Ac-Acs Peptide And Carba-Nad L 4e-08
3glr_A285 Crystal Structure Of Human Sirt3 With Acetyl-Lysine 4e-08
4hd8_A284 Crystal Structure Of Human Sirt3 In Complex With Fl 5e-08
1s5p_A235 Structure And Substrate Binding Properties Of Cobb, 1e-05
1q1a_A289 Structure Of The Yeast Hst2 Protein Deacetylase In 3e-04
1szc_A297 Structural Basis For Nicotinamide Cleavage And Adp- 3e-04
1q17_A300 Structure Of The Yeast Hst2 Protein Deacetylase In 4e-04
2od7_A308 Crystal Structure Of Yhst2 Bound To The Intermediat 4e-04
2hjh_A354 Crystal Structure Of The Sir2 Deacetylase Length = 4e-04
1q14_A361 Structure And Autoregulation Of The Yeast Hst2 Homo 6e-04
2od2_A308 Crystal Structure Of Yhst2 I117f Mutant Bound To Ca 7e-04
4iao_A492 Crystal Structure Of Sir2 C543s Mutant In Complex W 8e-04
>pdb|3PKI|A Chain A, Human Sirt6 Crystal Structure In Complex With Adp Ribose Length = 355 Back     alignment and structure 
Iteration: 1

 Score =  206 bits (524), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 100/186 (53%), Positives = 134/186 (72%), Gaps = 6/186 (3%)
Query: 2   PGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFR 61
           P  THMALV+LE+ G+L+F++SQNVDGLH+RSG PR+KLAELHGN F+E C  C ++Y R
Sbjct: 91  PTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVR 150
Query: 62  DFEVETIGLKETSRRCSDLK------CGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVV 115
           D  V T+GLK T R C+  K      C  +LRDT+LDWED+LP +++  A++  + AD+ 
Sbjct: 151 DTVVGTMGLKATGRLCTVAKARGLRACRGELRDTILDWEDSLPDRDLALADEASRNADLS 210
Query: 116 LCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVMDLLN 175
           + LGTSLQI P+ NLPL   R GG++VIVNLQ T  D+ A L IHG+VD+V+  +M+ L 
Sbjct: 211 ITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPTKHDRHADLRIHGYVDEVMTRLMEHLG 270
Query: 176 LRIPPY 181
           L IP +
Sbjct: 271 LEIPAW 276
>pdb|3K35|A Chain A, Crystal Structure Of Human Sirt6 Length = 318 Back     alignment and structure
>pdb|1M2N|A Chain A, Sir2 Homologues (D102gF159AR170A) MUTANT-2'-O-Acetyl Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|1M2G|A Chain A, Sir2 Homologue-Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|1M2H|A Chain A, Sir2 Homologue S24a Mutant-adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|1YC5|A Chain A, Sir2-P53 Peptide-Nicotinamide Length = 246 Back     alignment and structure
>pdb|1M2K|A Chain A, Sir2 Homologue F159a Mutant-Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|1ICI|A Chain A, Crystal Structure Of A Sir2 Homolog-Nad Complex Length = 256 Back     alignment and structure
>pdb|1M2J|A Chain A, Sir2 Homologue H80n Mutant-Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|2H4H|A Chain A, Sir2 H116y Mutant-P53 Peptide-Nad Length = 246 Back     alignment and structure
>pdb|2H59|A Chain A, Sir2 H116a-Deacetylated P53 Peptide-3'-O-Acetyl Adp Ribose Length = 246 Back     alignment and structure
>pdb|1MA3|A Chain A, Structure Of A Sir2 Enzyme Bound To An Acetylated P53 Peptide Length = 253 Back     alignment and structure
>pdb|3JWP|A Chain A, Crystal Structure Of Plasmodium Falciparum Sir2a (Pf13_0152) In Complex With Amp Length = 265 Back     alignment and structure
>pdb|3U31|A Chain A, Plasmodium Falciparum Sir2a Preferentially Hydrolyzes Medium And Long Chain Fatty Acyl Lysine Length = 290 Back     alignment and structure
>pdb|2B4Y|A Chain A, Crystal Structure Of Human Sirtuin Homolog 5 Length = 271 Back     alignment and structure
>pdb|4HDA|A Chain A, Crystal Structure Of Human Sirt5 In Complex With Fluor-de-lys Peptide And Resveratrol Length = 275 Back     alignment and structure
>pdb|3RIG|A Chain A, Sirt5 Is An Nad-Dependent Protein Lysine Demalonylase And Desuccinylase Length = 273 Back     alignment and structure
>pdb|4G1C|A Chain A, Human Sirt5 Bound To Succ-Idh2 And Carba-Nad Length = 267 Back     alignment and structure
>pdb|2NYR|A Chain A, Crystal Structure Of Human Sirtuin Homolog 5 In Complex With Suramin Length = 271 Back     alignment and structure
>pdb|1J8F|C Chain C, Human Sirt2 Histone Deacetylase Length = 323 Back     alignment and structure
>pdb|1J8F|A Chain A, Human Sirt2 Histone Deacetylase Length = 323 Back     alignment and structure
>pdb|4FVT|A Chain A, Human Sirt3 Bound To Ac-Acs Peptide And Carba-Nad Length = 274 Back     alignment and structure
>pdb|3GLR|A Chain A, Crystal Structure Of Human Sirt3 With Acetyl-Lysine Acecs2 Peptide Length = 285 Back     alignment and structure
>pdb|4HD8|A Chain A, Crystal Structure Of Human Sirt3 In Complex With Fluor-de-lys Peptide And Piceatannol Length = 284 Back     alignment and structure
>pdb|1S5P|A Chain A, Structure And Substrate Binding Properties Of Cobb, A Sir2 Homolog Protein Deacetylase From Eschericia Coli Length = 235 Back     alignment and structure
>pdb|1Q1A|A Chain A, Structure Of The Yeast Hst2 Protein Deacetylase In Ternary Complex With 2'-O-Acetyl Adp Ribose And Histone Peptide Length = 289 Back     alignment and structure
>pdb|1SZC|A Chain A, Structural Basis For Nicotinamide Cleavage And Adp-Ribose Transfer By Nad+-Dependent Sir2 HistonePROTEIN DEACETYLASES Length = 297 Back     alignment and structure
>pdb|1Q17|A Chain A, Structure Of The Yeast Hst2 Protein Deacetylase In Ternary Complex With 2'-O-Acetyl Adp Ribose And Histone Peptide Length = 300 Back     alignment and structure
>pdb|2OD7|A Chain A, Crystal Structure Of Yhst2 Bound To The Intermediate Analogue Adp-Hpd, And And Aceylated H4 Peptide Length = 308 Back     alignment and structure
>pdb|2HJH|A Chain A, Crystal Structure Of The Sir2 Deacetylase Length = 354 Back     alignment and structure
>pdb|1Q14|A Chain A, Structure And Autoregulation Of The Yeast Hst2 Homolog Of Sir2 Length = 361 Back     alignment and structure
>pdb|2OD2|A Chain A, Crystal Structure Of Yhst2 I117f Mutant Bound To Carba-Nad+ And An Acetylated H4 Peptide Length = 308 Back     alignment and structure
>pdb|4IAO|A Chain A, Crystal Structure Of Sir2 C543s Mutant In Complex With Sid Domain Of Sir4 Length = 492 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query375
3k35_A318 NAD-dependent deacetylase sirtuin-6; rossmann fold 2e-80
3pki_A355 NAD-dependent deacetylase sirtuin-6; ADP ribose, s 1e-79
1yc5_A246 NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, 2e-61
1q14_A361 HST2 protein; histone deacetylase, hydrolase; 2.50 1e-45
1m2k_A249 Silent information regulator 2; protein-ligand com 4e-44
1q1a_A289 HST2 protein; ternary complex, histone deacetylase 3e-43
1ma3_A253 SIR2-AF2, transcriptional regulatory protein, SIR2 1e-42
3u31_A290 SIR2A, transcriptional regulatory protein SIR2 hom 9e-42
3riy_A273 NAD-dependent deacetylase sirtuin-5; desuccinylase 1e-36
1s5p_A235 NAD-dependent deacetylase; protein deacetylase, SI 5e-36
3glr_A285 NAD-dependent deacetylase sirtuin-3, mitochondria; 6e-35
1j8f_A323 SIRT2, sirtuin 2, isoform 1, silencing INFO; gene 9e-34
2hjh_A354 NAD-dependent histone deacetylase SIR2; protein, s 1e-32
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens} Length = 318 Back     alignment and structure
 Score =  248 bits (635), Expect = 2e-80
 Identities = 100/193 (51%), Positives = 135/193 (69%), Gaps = 6/193 (3%)

Query: 2   PGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFR 61
           P  THMALV+LE+ G+L+F++SQNVDGLH+RSG PR+KLAELHGN F+E C  C ++Y R
Sbjct: 91  PTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVR 150

Query: 62  DFEVETIGLKETSRRCSDL------KCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVV 115
           D  V T+GLK T R C+         C  +LRDT+LDWED+LP +++  A++  + AD+ 
Sbjct: 151 DTVVGTMGLKATGRLCTVAKARGLRACRGELRDTILDWEDSLPDRDLALADEASRNADLS 210

Query: 116 LCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVMDLLN 175
           + LGTSLQI P+ NLPL   R GG++VIVNLQ T  D+ A L IHG+VD+V+  +M  L 
Sbjct: 211 ITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPTKHDRHADLRIHGYVDEVMTRLMKHLG 270

Query: 176 LRIPPYIRIDLLQ 188
           L IP +    +L+
Sbjct: 271 LEIPAWDGPRVLE 283
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A* Length = 355 Back     alignment and structure
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A* Length = 246 Back     alignment and structure
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 Length = 361 Back     alignment and structure
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A* Length = 249 Back     alignment and structure
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A* Length = 289 Back     alignment and structure
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A* Length = 253 Back     alignment and structure
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A* Length = 290 Back     alignment and structure
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} PDB: 3rig_A* 2b4y_A* 2nyr_A* Length = 273 Back     alignment and structure
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5 Length = 235 Back     alignment and structure
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A Length = 285 Back     alignment and structure
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5 Length = 323 Back     alignment and structure
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae} Length = 354 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query375
3k35_A318 NAD-dependent deacetylase sirtuin-6; rossmann fold 100.0
3pki_A355 NAD-dependent deacetylase sirtuin-6; ADP ribose, s 100.0
1yc5_A246 NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, 100.0
3glr_A285 NAD-dependent deacetylase sirtuin-3, mitochondria; 100.0
1ma3_A253 SIR2-AF2, transcriptional regulatory protein, SIR2 100.0
1m2k_A249 Silent information regulator 2; protein-ligand com 100.0
1q1a_A289 HST2 protein; ternary complex, histone deacetylase 100.0
2hjh_A354 NAD-dependent histone deacetylase SIR2; protein, s 100.0
4iao_A492 NAD-dependent histone deacetylase SIR2; protein co 100.0
3riy_A273 NAD-dependent deacetylase sirtuin-5; desuccinylase 100.0
1j8f_A323 SIRT2, sirtuin 2, isoform 1, silencing INFO; gene 100.0
1q14_A361 HST2 protein; histone deacetylase, hydrolase; 2.50 100.0
1s5p_A235 NAD-dependent deacetylase; protein deacetylase, SI 100.0
3u31_A290 SIR2A, transcriptional regulatory protein SIR2 hom 100.0
2c31_A568 Oxalyl-COA decarboxylase; oxalate, thiamin diphosp 93.7
2q28_A564 Oxalyl-COA decarboxylase; lyase, oxalate degradati 92.45
3rls_A175 YAF9, protein AF-9 homolog; yeats domain, histone, 91.67
3qrl_A140 Transcription initiation factor TFIID subunit 14; 91.4
2iht_A573 Carboxyethylarginine synthase; thiamin diphosphate 91.24
1o97_D320 Electron transferring flavoprotein alpha-subunit; 91.18
1ybh_A590 Acetolactate synthase, chloroplast; acetohydroxyac 90.87
4feg_A603 Pyruvate oxidase; carbanion, structure activity re 90.79
1ozh_A566 ALS, acetolactate synthase, catabolic; acetohydrox 90.57
3lq1_A578 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 90.55
2pgn_A589 Cyclohexane-1,2-dione hydrolase (CDH); three alpha 89.95
3eya_A549 Pyruvate dehydrogenase [cytochrome]; pyruvate oxid 89.64
2uz1_A563 Benzaldehyde lyase; thiamine diphosphate, thiamine 89.23
1efv_A315 Electron transfer flavoprotein; electron transport 88.17
1efp_A307 ETF, protein (electron transfer flavoprotein); ele 87.53
3hww_A556 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 87.29
1v5e_A590 Pyruvate oxidase; oxidoreductase, flavoprotein; HE 86.69
1q6z_A528 BFD, BFDC, benzoylformate decarboxylase; lyase, ca 86.69
2pan_A616 Glyoxylate carboligase; thiamin-diphosphate (THDP) 86.31
2x7j_A604 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene - 86.29
1t9b_A677 Acetolactate synthase, mitochondrial; acetohydroxy 84.56
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=5e-50  Score=392.77  Aligned_cols=184  Identities=54%  Similarity=0.922  Sum_probs=166.1

Q ss_pred             CCCHHHHHHHHHHHcCCccEEEecCcchhHhhcCCCCCCeEEecCCccccccCCCCCcccchhhhhhhcccCcCCCCCC-
Q 017188            1 MPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDFEVETIGLKETSRRCSD-   79 (375)
Q Consensus         1 ~PN~aH~aLa~Lek~G~l~~VITQNIDGLH~kAG~p~~kViELHGnl~~~~C~~C~~~y~~d~~v~~i~~~~~~P~Cp~-   79 (375)
                      +||.+|++|++|+++|++.+||||||||||++||+++++|+|||||++..+|..|++.|.++............|.|+. 
T Consensus        90 ~Pn~~H~aLa~Le~~g~~~~viTQNIDgLh~rAG~~~~~VielHGsl~~~~C~~C~~~~~~~~~~~~~~~~p~~~~C~~~  169 (318)
T 3k35_A           90 RPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLKATGRLCTVA  169 (318)
T ss_dssp             CCCHHHHHHHHHHHTTCCCEEEECCCSCHHHHBTCCGGGEEETTCCTTEEEETTTCCEEECSSCCSCCSSCEEEEECCC-
T ss_pred             CCCHHHHHHHHHHHcCCceEEEEecccchHhhcCCCccCEEEeCCCCCeeEeCCCCCccchHHhhhhcccCCCCCcCccc
Confidence            6999999999999999999999999999999999988899999999999999999999887654332222223346641 


Q ss_pred             -----cCCCccccccEEEcCCCCCccchhHHHHHhhcCCEEEEEccCccccccccchHhhhcCCCeEEEECCCCCCCCCC
Q 017188           80 -----LKCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKK  154 (375)
Q Consensus        80 -----~~CgG~LRP~VVlFGE~lP~~~~~~A~~~i~~aDLlLVLGTSL~V~Pa~~Lp~~a~~~G~~lIiINlq~t~~d~~  154 (375)
                           +.|||.|||+||||||++|.+.++.|.+++++||++|||||||+|+|+++|+..+.++|+++++||+++|+.|..
T Consensus       170 ~~~~c~~CgG~LRPdVV~FGE~lP~~~~~~a~~~~~~aDllLViGTSL~V~Paa~l~~~a~~~G~~vviIN~~~t~~d~~  249 (318)
T 3k35_A          170 KARGLRACRGELRDTILDWEDSLPDRDLALADEASRNADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPTKHDRH  249 (318)
T ss_dssp             -------CCCEEEECCCCTTCCCCHHHHHHHHHHHHTCSEEEEESCCCCSTTGGGHHHHHHHTTCEEEEECSSCCTTGGG
T ss_pred             ccccccCcCCeeCCCEEEccCcCCHHHHHHHHHHHhcCCEEEEEccCCCchhhhhhHHHHHhcCCEEEEECCCCCCCCCc
Confidence                 269999999999999999999899999999999999999999999999999998889999999999999999999


Q ss_pred             ceEEEeccHHHHHHHHHHHhccCCCCccch
Q 017188          155 ASLVIHGFVDKVVAGVMDLLNLRIPPYIRI  184 (375)
Q Consensus       155 adl~I~g~~devL~~L~~~L~~~iP~~~~~  184 (375)
                      +|++|+|+++++|++|++.|||+||+|+.-
T Consensus       250 adl~i~g~~~evl~~L~~~Lg~~iP~~~~~  279 (318)
T 3k35_A          250 ADLRIHGYVDEVMTRLMKHLGLEIPAWDGP  279 (318)
T ss_dssp             CSEEECSCHHHHHHHHHHHHTCCCCCCCSC
T ss_pred             ccEEEeCCHHHHHHHHHHHhCCCCCCCCCC
Confidence            999999999999999999999999999863
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A* Back     alignment and structure
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A* Back     alignment and structure
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A* Back     alignment and structure
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A* Back     alignment and structure
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A* Back     alignment and structure
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A* Back     alignment and structure
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae} Back     alignment and structure
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A* Back     alignment and structure
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5 Back     alignment and structure
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 Back     alignment and structure
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5 Back     alignment and structure
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A* Back     alignment and structure
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A* Back     alignment and structure
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A* Back     alignment and structure
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A Back     alignment and structure
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A Back     alignment and structure
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A* Back     alignment and structure
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D* Back     alignment and structure
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A* Back     alignment and structure
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A* Back     alignment and structure
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A* Back     alignment and structure
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes} Back     alignment and structure
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* Back     alignment and structure
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A* Back     alignment and structure
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A* Back     alignment and structure
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R* Back     alignment and structure
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2 Back     alignment and structure
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* Back     alignment and structure
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A* Back     alignment and structure
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X* Back     alignment and structure
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} Back     alignment and structure
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis} Back     alignment and structure
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 375
d1yc5a1245 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA 5e-32
d1m2ka_249 c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Ar 9e-32
d2b4ya1267 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirt 1e-31
d1ma3a_252 c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Arc 2e-30
d1q1aa_289 c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces c 3e-29
d1s5pa_235 c.31.1.5 (A:) NAD-dependent deacetylase CobB {Esch 4e-27
d1j8fa_323 c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Ho 7e-27
>d1yc5a1 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA {Thermotoga maritima [TaxId: 2336]} Length = 245 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase NpdA
species: Thermotoga maritima [TaxId: 2336]

 Score =  119 bits (298), Expect = 5e-32
 Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 5/176 (2%)

Query: 1   MPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYF 60
            P + H+ L +LE+ G+++ VI+QN+D LH R+G  +  + ELHGN     C  C  +Y 
Sbjct: 75  KPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGSKK--VIELHGNVEEYYCVRCEKKYT 132

Query: 61  RDFEVETIGLKETSRRCSDLKCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGT 120
            +  ++ +   +         C + +R  ++ + + LP   +  A      A +++ LG+
Sbjct: 133 VEDVIKKLESSDVPLCD---DCNSLIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGS 189

Query: 121 SLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIHGFVDKVVAGVMDLLNL 176
           SL + PA  LPL  +R GGK+VIVNL +TP D  A+L  +  V +    VM+   +
Sbjct: 190 SLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLKYNMDVVEFARRVMEEGGI 245
>d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 249 Back     information, alignment and structure
>d2b4ya1 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirtuin-5 {Human (Homo sapiens) [TaxId: 9606]} Length = 267 Back     information, alignment and structure
>d1ma3a_ c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 252 Back     information, alignment and structure
>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 289 Back     information, alignment and structure
>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia coli [TaxId: 562]} Length = 235 Back     information, alignment and structure
>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]} Length = 323 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query375
d1yc5a1245 NAD-dependent deacetylase NpdA {Thermotoga maritim 100.0
d1s5pa_235 NAD-dependent deacetylase CobB {Escherichia coli [ 100.0
d1m2ka_249 AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeo 100.0
d1q1aa_289 Hst2 {Baker's yeast (Saccharomyces cerevisiae) [Ta 100.0
d2b4ya1267 NAD-dependent deacetylase sirtuin-5 {Human (Homo s 100.0
d1j8fa_323 Sirt2 histone deacetylase {Human (Homo sapiens) [T 100.0
d1ma3a_252 AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeog 100.0
d2ji7a1175 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 97.43
d2djia1177 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 96.96
d1ybha1179 Acetohydroxyacid synthase catalytic subunit {Thale 96.88
d2ihta1177 Carboxyethylarginine synthase {Streptomyces clavul 96.86
d2ez9a1183 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 96.8
d1t9ba1171 Acetohydroxyacid synthase catalytic subunit {Baker 96.73
d1ozha1179 Catabolic acetolactate synthase {Klebsiella pneumo 96.69
d1q6za1160 Benzoylformate decarboxylase {Pseudomonas putida [ 95.9
d1ovma1161 Indole-3-pyruvate decarboxylase {Enterobacter cloa 94.03
d1efva2124 C-terminal domain of the electron transfer flavopr 93.46
d1zpda1175 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 92.83
d1pvda1179 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 92.44
d3clsd2123 C-terminal domain of the electron transfer flavopr 91.99
d1ytla1158 Acetyl-CoA decarbonylase/synthase complex epsilon 85.55
d1pnoa_180 Transhydrogenase domain III (dIII) {Rhodospirillum 83.65
>d1yc5a1 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase NpdA
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.9e-47  Score=358.67  Aligned_cols=171  Identities=33%  Similarity=0.548  Sum_probs=160.7

Q ss_pred             CCCHHHHHHHHHHHcCCccEEEecCcchhHhhcCCCCCCeEEecCCccccccCCCCCcccchhhhhhhcccCcCCCCCCc
Q 017188            1 MPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDFEVETIGLKETSRRCSDL   80 (375)
Q Consensus         1 ~PN~aH~aLa~Lek~G~l~~VITQNIDGLH~kAG~p~~kViELHGnl~~~~C~~C~~~y~~d~~v~~i~~~~~~P~Cp~~   80 (375)
                      +||++|++|++|+++|++.+||||||||||++||+  ++|+|+|||++..+|..|++.|+.+.....+. ....|.|+  
T Consensus        75 ~P~~~H~~L~~l~~~~~~~~viTQNiDgLh~~AG~--~~v~elHG~l~~~~C~~c~~~~~~~~~~~~~~-~~~~p~c~--  149 (245)
T d1yc5a1          75 KPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGS--KKVIELHGNVEEYYCVRCEKKYTVEDVIKKLE-SSDVPLCD--  149 (245)
T ss_dssp             CCCHHHHHHHHHHHTTSCSEEEECCCSCHHHHTTC--SCEEETTEEEEEEEETTTCCEEEHHHHHHHTT-TCSSCBCT--
T ss_pred             hhhhhhHHHHHHHhcCCCceEeecccchHHHHcCC--ccccccccccceeeecccCCCccHHHHhhhhh-cccCCCcc--
Confidence            69999999999999999999999999999999998  58999999999999999999998876655543 34578898  


Q ss_pred             CCCccccccEEEcCCCCCccchhHHHHHhhcCCEEEEEccCccccccccchHhhhcCCCeEEEECCCCCCCCCCceEEEe
Q 017188           81 KCGAKLRDTVLDWEDALPPKEMNPAEKHCKIADVVLCLGTSLQITPACNLPLKCLRGGGKIVIVNLQKTPKDKKASLVIH  160 (375)
Q Consensus        81 ~CgG~LRP~VVlFGE~lP~~~~~~A~~~i~~aDLlLVLGTSL~V~Pa~~Lp~~a~~~G~~lIiINlq~t~~d~~adl~I~  160 (375)
                      .|||.|||+||||||.+|++.+..|.+++++||++|||||||+|+|+++|+..++++|+++|+||+++|+.|..+|+.|+
T Consensus       150 ~Cgg~lrP~Vv~FgE~lp~~~~~~a~~~~~~~DlllviGTSl~V~p~~~l~~~a~~~g~~~i~IN~~~t~~d~~~d~~i~  229 (245)
T d1yc5a1         150 DCNSLIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLKYN  229 (245)
T ss_dssp             TTCCBEEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCSCEETGGGHHHHHHHHTCEEEEECSSCCTTGGGCSEEEC
T ss_pred             ccCCcccCcEEEccccCCHHHHHHHHHHhhcCCEEEEECCCeEEechhhhhHHHHHcCCeEEEECCCCCCCCcceeEEEe
Confidence            89999999999999999998899999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHhcc
Q 017188          161 GFVDKVVAGVMDLLNL  176 (375)
Q Consensus       161 g~~devL~~L~~~L~~  176 (375)
                      |+++++|++|++.||+
T Consensus       230 g~~~e~l~~l~~~lgi  245 (245)
T d1yc5a1         230 MDVVEFARRVMEEGGI  245 (245)
T ss_dssp             SCHHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHcCC
Confidence            9999999999999985
>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2b4ya1 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirtuin-5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ma3a_ c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1t9ba1 c.31.1.3 (A:290-460) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1efva2 c.31.1.2 (A:208-331) C-terminal domain of the electron transfer flavoprotein alpha subunit {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d3clsd2 c.31.1.2 (D:196-318) C-terminal domain of the electron transfer flavoprotein alpha subunit {Methylophilus methylotrophus [TaxId: 17]} Back     information, alignment and structure
>d1ytla1 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synthase complex epsilon subunit 2, ACDE2 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1pnoa_ c.31.1.4 (A:) Transhydrogenase domain III (dIII) {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure