Citrus Sinensis ID: 017191

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-----
Protein Sequence
MSSLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKDHFDEEELKLNLQRDDQAQAVKILRDDSCKVDLEEPLLCDKTAEDYASNIH
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHccEEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHEEEcccccccHHHHHHHccccHHHHHHHHcccccccccccccccccccHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEHEHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccccHHHcccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MSSLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSrkyksssmglrsFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLekidlgsvRSVAKILGTIFCVGGAISMallrgpkllnteflpeksflfrssggenwLLGCLFLFASACCWSLWLILqvpvsasypdhlsLSAWMCFLATLQSATFaiftepdpeawnlhsSLEIFCCFfsgaigsgVSFCVQAWCiskrgplfsamfnpLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWgkakdhfdEEELKLNLQRDDQAQAVKILRddsckvdleepllcdktaedyasnih
Flexible Loop (DISEMBL)
MSSLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKDHFDEEELKlnlqrddqAQAVKIlrddsckvdleepllcdktaedyasnih
Low Complexity Region (SEG)
MSSLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLasssmasamGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKDHFDEEELKLNLQRDDQAQAVKILRDDSCKVDLEEPLLCDKTAEDYASNIH
Disordered region (IsUnstruct)
*********AMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKDHFDEEELKLNL******QAVKILRDDSCKVDLEEPLLC************
Disordered Region (DISOPRED)
*****DYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLN******************WLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLW*******************************************************
Disordered Region (DISEMBL)
MSSLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKDHFDEEELKLNLQRDDQAQAVKILRDDSCKVDLEEPLLCDKTAEDYASNIH
Disordered Region (DISPRO)
*SSLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEF*************ENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAK***************************************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKDHFDEEELKLNLQRDDQAQAVKILRDDSCKVDLEEPLLCDKTAEDYASNIH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	375	2.2.26 [Sep-21-2011]
Q9M0B8	373	WAT1-related protein At4g	yes	no	0.954	0.959	0.582	1e-116
Q9SUD5	359	WAT1-related protein At4g	no	no	0.930	0.972	0.489	6e-90
Q94AP3	389	Protein WALLS ARE THIN 1	no	no	0.946	0.912	0.379	1e-66
Q6J163	410	Auxin-induced protein 5NG	N/A	no	0.928	0.848	0.364	3e-62
O80638	374	WAT1-related protein At2g	no	no	0.853	0.855	0.396	4e-62
Q9LV20	383	WAT1-related protein At3g	no	no	0.872	0.853	0.389	4e-62
F4IJ08	394	WAT1-related protein At2g	no	no	0.88	0.837	0.368	8e-59
F4HZQ7	389	WAT1-related protein At1g	no	no	0.877	0.845	0.366	1e-57
Q9LPF1	370	WAT1-related protein At1g	no	no	0.896	0.908	0.351	2e-57
Q501F8	373	WAT1-related protein At4g	no	no	0.866	0.871	0.354	1e-55

>sp|Q9M0B8|WTR37_ARATH WAT1-related protein At4g30420 OS=Arabidopsis thaliana GN=At4g30420 PE=3 SV=1

 Score =  420 bits (1079), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/374 (58%), Positives = 265/374 (70%), Gaps = 16/374 (4%)

Query: 11  MAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKS--SSM 68
           MAM  +Q  YA V L  RA L+ G++PRVF++YRQA AT+F+ P  YLS RK K   SS+
Sbjct: 1   MAMTMIQLCYAGVTLFARATLVHGLSPRVFILYRQAFATIFIFPFLYLSRRKSKIAISSL 60

Query: 69  GLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDL 128
            L+SFSLIF ++L+G+TINQN Y EGLYL SSSM SA+GN+IPAITF+++ + G EK++L
Sbjct: 61  DLKSFSLIFLVSLIGITINQNLYLEGLYLTSSSMGSAVGNIIPAITFLISFLAGYEKLNL 120

Query: 129 GSVRSVAKILGTIFCVGGAISMALLRGPKLLNTE-FLP-EKSFLFRSSGGENWLLGCLFL 186
             +R +AKI GTI CV GAISM LLRGPK+LN+E  LP  KS L        WL+GCLFL
Sbjct: 121 RDIRGLAKIAGTILCVAGAISMTLLRGPKILNSESALPIAKSVLGHLKDQNTWLIGCLFL 180

Query: 187 FASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLE 246
           F+S  CWS WLILQVP+SA YPD+LSLSAWMC   T+Q A    F E DP AW LHS  E
Sbjct: 181 FSSTLCWSFWLILQVPISAYYPDNLSLSAWMCLFGTIQCAVVTFFLEKDPNAWILHSYSE 240

Query: 247 IFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLV 306
              C ++G   S +SF VQAW I+KRGP+FSA+FNPLCTVIVTILAAL  HEEIYTGSL+
Sbjct: 241 FATCLYAGIGASALSFTVQAWAIAKRGPVFSALFNPLCTVIVTILAALFFHEEIYTGSLI 300

Query: 307 GAIGVILGLYAVLWGKAKDHFDEEELKLNLQRD-DQAQAVKILRDDS-----CKVDLEEP 360
           G +GVILGLY VLWGKAKD    ++     QRD DQ   VKI  +DS     C  DL+ P
Sbjct: 301 GGLGVILGLYTVLWGKAKDVMMNQD-----QRDNDQKSEVKIHIEDSSNTTICNKDLKNP 355

Query: 361 LLCD-KTAEDYASN 373
           LL   K+ E+  ++
Sbjct: 356 LLSKHKSTEEIQTH 369

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUD5|WTR36_ARATH WAT1-related protein At4g28040 OS=Arabidopsis thaliana GN=At4g28040 PE=2 SV=1

 Score =  331 bits (848), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 179/366 (48%), Positives = 245/366 (66%), Gaps = 17/366 (4%)

Query: 4   LRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSS-RK 62
           +  YK  +A++ LQF+ A VAL T+AA ++G+NP VFVVYRQAIATLF+ P++++S+ RK
Sbjct: 3   ISKYKAVLALVMLQFTSAGVALFTKAAFMEGLNPTVFVVYRQAIATLFICPISFISAWRK 62

Query: 63  YKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVG 122
               S+G+R F  +   A++GVT+NQN YF+G+ L+SSSMA AM NLIPA+TF+++ IVG
Sbjct: 63  ENKPSLGVRGFWWVALTAVIGVTVNQNAYFKGIDLSSSSMACAMTNLIPAVTFIISIIVG 122

Query: 123 LEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLG 182
            E I   S++SVAK++GT  CVGGA++M  LRGPKLLN            +     WLLG
Sbjct: 123 FESIKRRSMKSVAKVIGTGVCVGGAMAMTFLRGPKLLNA---------LLNQDNTAWLLG 173

Query: 183 CLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAI-FTEPDPEAWNL 241
           C FL  S   WSLWLILQVP+++  PDHL  SA  CF+AT+ S   A+         W L
Sbjct: 174 CFFLLISTFAWSLWLILQVPIASHCPDHLYTSACTCFIATIASFLVALALGNTHLPPWKL 233

Query: 242 HSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIY 301
            S L++ CC +SG     +SF +QAW +S++GP+FSA+FNPL  VIVT   AL L E+ Y
Sbjct: 234 DSFLKLSCCIYSG-FQLAISFFLQAWIVSQKGPVFSALFNPLSAVIVTFFGALYLKEQTY 292

Query: 302 TGSLVGAIGVILGLYAVLWGKAKDHFDEE-ELKLNLQRDDQAQA--VKILRDDSC--KVD 356
            GSL+GA+ +ILGLY VLWGK++D+ +E  +LKL  + +  +Q+  V I+  D      +
Sbjct: 293 LGSLLGALAIILGLYIVLWGKSEDYQEESTDLKLENEHNTSSQSDIVSIMIGDKAFRSSE 352

Query: 357 LEEPLL 362
           L EPLL
Sbjct: 353 LLEPLL 358

Arabidopsis thaliana (taxid: 3702)

>sp|Q94AP3|WAT1_ARATH Protein WALLS ARE THIN 1 OS=Arabidopsis thaliana GN=WAT1 PE=1 SV=1

 Score =  253 bits (647), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 139/366 (37%), Positives = 209/366 (57%), Gaps = 11/366 (3%)

Query: 11  MAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGL 70
           +AML LQF YA   + +RAAL  G++  VF VYR  IA L + P AY   +K +  ++ L
Sbjct: 22  IAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKK-ERPAITL 80

Query: 71  RSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGS 130
                 FF+AL+G+T NQ  Y  GL   S + AS+M N +PAITF+MA+++ +EK+ +  
Sbjct: 81  NFLIQFFFLALIGITANQGFYLLGLDNTSPTFASSMQNSVPAITFLMAALLRIEKVRINR 140

Query: 131 VRSVAKILGTIFCVGGAISMALLRGPKL------LNTEFLPEKSFLFRSSGG---ENWLL 181
              ++KILGT  CV GA  + L +GP +      L+   L   S +    G    +NW L
Sbjct: 141 RDGISKILGTALCVAGASVITLYKGPTIYTPASHLHAHLLTTNSAVLAPLGNAAPKNWTL 200

Query: 182 GCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNL 241
           GC++L      WS WL+ Q PV  SYP  LS++++ CF   +Q    A F E D +AW  
Sbjct: 201 GCIYLIGHCLSWSGWLVFQAPVLKSYPARLSVTSYTCFFGIIQFLIIAAFCERDSQAWVF 260

Query: 242 HSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIY 301
           HS  E+F   ++G + SG++F VQ WCI + GP+F A++ P+ T++V I+A++ L EE Y
Sbjct: 261 HSGWELFTILYAGIVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIALGEEFY 320

Query: 302 TGSLVGAIGVILGLYAVLWGKAKDHFDEEELKLNLQRDDQAQAVKI-LRDDSCKVDLEEP 360
            G ++GA+ +I GLY VL+GK+++       K  +Q   +    +  +  +S K  +  P
Sbjct: 321 LGGIIGAVLIIAGLYFVLYGKSEERKFAALEKAAIQSSAEHGIERAPVSRNSIKSSITTP 380

Query: 361 LLCDKT 366
           LL   T
Sbjct: 381 LLHQST 386

Required for secondary wall formation in fibers, especially in short days conditions. Promotes indole metabolism and transport (e.g. tryptophan, neoglucobrassicin and auxin (indole-3-acetic acid)). May prevent salicylic-acid (SA) accumulation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6J163|5NG4_PINTA Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1

 Score =  239 bits (609), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 139/381 (36%), Positives = 210/381 (55%), Gaps = 33/381 (8%)

Query: 12  AMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLR 71
           AMLALQF YA   + +RAAL  G++  VF VYR  +A + + P AY   +K + + + L 
Sbjct: 22  AMLALQFGYAGFHIVSRAALNMGVSKVVFPVYRNILALMLIGPCAYFLEKKERPA-LTLS 80

Query: 72  SFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSV 131
                F +AL G+T         + L   + ASA+ N +PAITF+MA+ + LEK+ +   
Sbjct: 81  FLIQFFLLALCGITGQSRILSLRIVLHIPTFASAIQNSVPAITFIMAAALRLEKVHISRR 140

Query: 132 RSVAKILGTIFCVGGAISMALLRGPKLL-----NTEFLPEKSFLFR----SSGGENWLLG 182
             +AKI+GT+ CV GA  + L +GP +      N E        F+    S+  ENW LG
Sbjct: 141 DGLAKIIGTVACVSGATIITLYKGPPITHIWRPNLEVTASYFKAFQGNDLSAKSENWTLG 200

Query: 183 CLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLH 242
           C++L  +   WS W++LQ PV   YP  LS++++ CF   +Q    A F E D E W +H
Sbjct: 201 CIYLLGNCLAWSGWIVLQAPVLKRYPARLSVTSFTCFFGVIQFLIIAAFFETDLEHWKIH 260

Query: 243 SSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYT 302
           S  E+F   ++G + SG++F VQ WCI + GP+F A++ P+ T+ V I+A+++L E+ Y 
Sbjct: 261 SGGELFTILYAGFVASGIAFSVQIWCIDRGGPVFVAVYQPVQTIAVAIMASIILGEQFYL 320

Query: 303 GSLVGAIGVILGLYAVLWGKAKDHFDEEELKLNL-----------QRDDQAQAVKILRDD 351
           G + GAI +I+GLY VLWGK+      EE +L L           Q D+  Q+  ++ + 
Sbjct: 321 GGIFGAILIIIGLYLVLWGKS------EEKRLGLLQAKSSMVPENQPDNMDQSATLIINS 374

Query: 352 SCKVD------LEEPLLCDKT 366
           S  +       L +PLL D +
Sbjct: 375 SNGIKPNTSSSLTQPLLLDTS 395

Pinus taeda (taxid: 3352)

>sp|O80638|WTR14_ARATH WAT1-related protein At2g39510 OS=Arabidopsis thaliana GN=At2g39510 PE=2 SV=1

 Score =  239 bits (609), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 201/330 (60%), Gaps = 10/330 (3%)

Query: 3   SLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRK 62
           +L+ +KP + +++LQF YA +++  + AL QGM+P V   YR  +AT+F+AP AY   RK
Sbjct: 2   ALKTWKPFITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRK 61

Query: 63  YKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVG 122
            +   M L  F  I  + LL  TI+QN Y+ G+   S++  +AM N++PA  F+MA I  
Sbjct: 62  IRPK-MTLSIFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFR 120

Query: 123 LEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKL----LNTEFLPEKSFLFRSSGGEN 178
           LEK+++  + S AKILGTI  VGGA+ M +++GP +     N   + + S    ++G + 
Sbjct: 121 LEKVNVKKIHSQAKILGTIVTVGGAMLMTVVKGPLIPLPWANPHDIHQDS---SNTGVKQ 177

Query: 179 WLLGCLFLFASAC-CWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEP-DP 236
            L     L A  C CW+ ++ LQ     SYP  LSL+A++CFL +++S   A+F E  +P
Sbjct: 178 DLTKGASLIAIGCICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERGNP 237

Query: 237 EAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLL 296
            AW +H   ++    + G I SG+ + VQ   +  RGP+F   FNPL  VIV IL +++L
Sbjct: 238 SAWAIHLDSKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIIL 297

Query: 297 HEEIYTGSLVGAIGVILGLYAVLWGKAKDH 326
            E ++ G ++GAI ++LGLY+VLWGK+KD 
Sbjct: 298 AEVMFLGRILGAIVIVLGLYSVLWGKSKDE 327

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LV20|WTR17_ARATH WAT1-related protein At3g18200 OS=Arabidopsis thaliana GN=At3g18200 PE=2 SV=1

 Score =  238 bits (608), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 130/334 (38%), Positives = 194/334 (58%), Gaps = 7/334 (2%)

Query: 8   KPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSS 67
           K  +A++ LQF +A   + +R AL  G++  V+ VYR  +A L + P AY   +K +   
Sbjct: 34  KLVVALITLQFCFAGFHIVSRVALNIGVSKVVYPVYRNLLALLLIGPFAYFFEKK-ERPP 92

Query: 68  MGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKID 127
           + +   +  FF+AL+G+T NQ  Y  GLY A+ + ASAM N +PAITF+MA  + LE ID
Sbjct: 93  LTISLLAQFFFLALIGITANQGFYLLGLYYATPTFASAMQNSVPAITFIMACALRLEHID 152

Query: 128 LGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLF 187
           L     VAK+LGT+  +GGA  + L RG  + +     +K  +  S    +  LG L+L 
Sbjct: 153 LVRKHGVAKVLGTLVSIGGATVITLYRGFPIFDQGLNMQKEEVVGSDNSHSLTLGWLYLM 212

Query: 188 ASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEI 247
                W+ W++LQ PV   YP  L+L+++ CF   +Q    A+F E D   W + S  E+
Sbjct: 213 GHCLSWAGWMVLQAPVLKQYPAKLTLTSFTCFFGLIQFLVIALFVETDLNNWIIVSWEEL 272

Query: 248 FCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVG 307
           F   ++G I SG+   +Q WCI K GP+F A+F PL T++V  +A L+L +++Y+G +VG
Sbjct: 273 FTILYAGIIASGLVVYLQTWCIYKSGPVFVAVFQPLQTLLVAAMAFLILGDQLYSGGIVG 332

Query: 308 AIGVILGLYAVLWGKAKDHFDEEELKLNLQRDDQ 341
           A+ ++LGLY VLWGK       EE KL L+   Q
Sbjct: 333 AVFIMLGLYLVLWGK------NEERKLALEESQQ 360

Arabidopsis thaliana (taxid: 3702)

>sp|F4IJ08|WTR15_ARATH WAT1-related protein At2g40900 OS=Arabidopsis thaliana GN=At2g40900 PE=2 SV=1

 Score =  228 bits (580), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 125/339 (36%), Positives = 194/339 (57%), Gaps = 9/339 (2%)

Query: 8   KPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSS 67
           KP  AM+ LQF YA + L T+  L +GM+  V V YR A AT  +AP A LS RK +S  
Sbjct: 10  KPYFAMVCLQFGYAGMNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRSK- 68

Query: 68  MGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKID 127
           M    F  IF +ALLG  I+QN Y+ GL L S + +SA+ N++PAIT ++A++  +EK++
Sbjct: 69  MTFPIFMRIFLLALLGPVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILATLFRMEKVE 128

Query: 128 LGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLF 187
           +  VR + K++GT+  V G+I M   +GP +    F         S    ++L   +FL 
Sbjct: 129 MRKVRCLVKVMGTLVTVVGSILMIFYKGPFI---NFFRSHLTAASSPPTADYLKAAVFLL 185

Query: 188 ASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEI 247
            ++  W+ + +LQ      Y  HLS+S  +CF+ TLQS   A   E +P A N+   + +
Sbjct: 186 LASLSWASFFVLQAATLKKYSAHLSMSTMVCFMGTLQSLALAFVMEHNPSALNIGFDMNL 245

Query: 248 FCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVG 307
               ++G + S +++ VQ   + ++GP+F   FNPL  VIV+I++  +L + IY G ++G
Sbjct: 246 LASAYAGIMSSSIAYYVQGLMMQRKGPVFVTAFNPLIVVIVSIMSFFVLGQGIYLGGVIG 305

Query: 308 AIGVILGLYAVLWGKAKDHFDEEELKLNLQRDDQAQAVK 346
            + +++G+YAVLWGK  D   EE      + +D   AVK
Sbjct: 306 VVVLMVGVYAVLWGKHVDDDGEET-----RHEDNVVAVK 339

Arabidopsis thaliana (taxid: 3702)

>sp|F4HZQ7|WTR5_ARATH WAT1-related protein At1g21890 OS=Arabidopsis thaliana GN=At1g21890 PE=2 SV=1

 Score =  224 bits (570), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/344 (36%), Positives = 187/344 (54%), Gaps = 15/344 (4%)

Query: 4   LRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKY 63
           +   KP +AM+++QF YA + + T  +L  GMN  V  VYR AIAT  +AP A    RK 
Sbjct: 6   MNSLKPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKI 65

Query: 64  KSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGL 123
           +   M  R F  I  +  +   ++QN Y+ G+   S++ ASA  N++PAITFV+A I  L
Sbjct: 66  RPK-MTFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRL 124

Query: 124 EKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSG-------- 175
           E ++   VRS+AK++GT+  V GA+ M L +GP +    F          +G        
Sbjct: 125 ESVNFKKVRSIAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHGGAGA 184

Query: 176 ---GENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFT 232
               ++W+ G L L      W+ + ILQ      YP  LSL+  +C + TL+    ++ T
Sbjct: 185 AAMDKHWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLVT 244

Query: 233 EPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILA 292
             D  AW +     +F   +SG I SGV++ VQ   + +RGP+F A FNPLC VI   L 
Sbjct: 245 VRDLSAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAALG 304

Query: 293 ALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKDHF---DEEELK 333
            ++L E I+ GS++G + +I+GLY V+WGK KD     D+E+ K
Sbjct: 305 VVVLSESIHLGSVIGTLFIIVGLYTVVWGKGKDKRMTDDDEDCK 348

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPF1|WTR8_ARATH WAT1-related protein At1g44800 OS=Arabidopsis thaliana GN=At1g44800 PE=1 SV=1

 Score =  223 bits (567), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 120/341 (35%), Positives = 196/341 (57%), Gaps = 5/341 (1%)

Query: 3   SLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRK 62
           S+   KP +A+++LQF YA + + T  +   GM+  V   YR  +AT+ MAP A +  RK
Sbjct: 5   SMEKIKPILAIISLQFGYAGMYIITMVSFKHGMDHWVLATYRHVVATVVMAPFALMFERK 64

Query: 63  YKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVG 122
            +   M L  F  +  + +L   ++QN Y+ GL   S+S  SA  N +PA+TF++A I  
Sbjct: 65  IRPK-MTLAIFWRLLALGILEPLMDQNLYYIGLKNTSASYTSAFTNALPAVTFILALIFR 123

Query: 123 LEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSG---GENW 179
           LE ++   V SVAK++GT+  VGGA+ M L +GP +   +     SF   SS    G++W
Sbjct: 124 LETVNFRKVHSVAKVVGTVITVGGAMIMTLYKGPAIEIVK-AAHNSFHGGSSSTPTGQHW 182

Query: 180 LLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAW 239
           +LG + +  S   W+ + ILQ      YP  LSL   +C + T+ +A  ++    DP AW
Sbjct: 183 VLGTIAIMGSISTWAAFFILQSYTLKVYPAELSLVTLICGIGTILNAIASLIMVRDPSAW 242

Query: 240 NLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEE 299
            +          +SG + SG+++ +Q+  I +RGP+F+  F+P+C +I   L AL+L E+
Sbjct: 243 KIGMDSGTLAAVYSGVVCSGIAYYIQSIVIKQRGPVFTTSFSPMCMIITAFLGALVLAEK 302

Query: 300 IYTGSLVGAIGVILGLYAVLWGKAKDHFDEEELKLNLQRDD 340
           I+ GS++GA+ ++LGLY+V+WGK+KD  +  + K+  +  +
Sbjct: 303 IHLGSIIGAVFIVLGLYSVVWGKSKDEVNPLDEKIVAKSQE 343

Arabidopsis thaliana (taxid: 3702)

>sp|Q501F8|WTR32_ARATH WAT1-related protein At4g08300 OS=Arabidopsis thaliana GN=At4g08300 PE=2 SV=1

 Score =  217 bits (553), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/341 (35%), Positives = 189/341 (55%), Gaps = 16/341 (4%)

Query: 8   KPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSS- 66
           KP +A+++LQF YA + + T  +   GMN  +   YR  +AT+ +AP A +  RK +   
Sbjct: 10  KPIIAIISLQFGYAGMYIITMVSFKHGMNHWILATYRHVVATIVIAPFALILERKIRPKM 69

Query: 67  --SMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLE 124
              + LR  +L F   LL    +QN Y+ G+   S++ +SA  N +PAITF+MA I  +E
Sbjct: 70  TWPLFLRILALGFLEPLL----DQNLYYIGMKATSATYSSAFVNALPAITFIMAVIFRIE 125

Query: 125 KIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGG-------E 177
            ++L   RS+AK++GT   VGGA+ M L +GP +    F    S L   S G       +
Sbjct: 126 TVNLKKTRSLAKVIGTAITVGGAMVMTLYKGPAI--ELFKTAHSSLHGGSSGTSSETTDQ 183

Query: 178 NWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPE 237
           NW+ G L +  S   W+ + ILQ      YP  LSL  W+C + T+ +   ++    D  
Sbjct: 184 NWVTGTLAVMGSITTWAGFFILQSFTLKKYPAELSLVMWICAMGTVLNTIASLIMVRDVS 243

Query: 238 AWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLH 297
           AW +          +SG + SG+++ +Q+  I +RGP+F+  F+P+C +I   L  L+L 
Sbjct: 244 AWKVGMDSGTLAAVYSGVVCSGMAYYIQSIVIRERGPVFTTSFSPMCMIITAFLGVLVLA 303

Query: 298 EEIYTGSLVGAIGVILGLYAVLWGKAKDHFDEEELKLNLQR 338
           E+I+ GS++GAI ++ GLY+V+WGKAKD     E K+ +Q 
Sbjct: 304 EKIHLGSIIGAIFIVFGLYSVVWGKAKDEVISVEEKIGMQE 344

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	375
224142317	371	predicted protein [Populus trichocarpa]	0.973	0.983	0.670	1e-140
224091873	322	predicted protein [Populus trichocarpa]	0.84	0.978	0.685	1e-126
449453922	369	PREDICTED: auxin-induced protein 5NG4-li	0.970	0.986	0.602	1e-119
224091869	348	predicted protein [Populus trichocarpa]	0.904	0.974	0.594	1e-118
449506258	365	PREDICTED: LOW QUALITY PROTEIN: auxin-in	0.96	0.986	0.6	1e-117
255574599	380	Auxin-induced protein 5NG4, putative [Ri	0.973	0.960	0.594	1e-117
15234742	373	nodulin MtN21 /EamA-like transporter fam	0.954	0.959	0.582	1e-115
297802988	371	predicted protein [Arabidopsis lyrata su	0.957	0.967	0.572	1e-114
357512833	530	Auxin-induced protein 5NG4 [Medicago tru	0.949	0.671	0.573	1e-113
255574601	375	Auxin-induced protein 5NG4, putative [Ri	0.944	0.944	0.579	1e-111

>gi|224142317|ref|XP_002324505.1| predicted protein [Populus trichocarpa] gi|222865939|gb|EEF03070.1| predicted protein [Populus trichocarpa]

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 254/379 (67%), Positives = 305/379 (80%), Gaps = 14/379 (3%)

Query: 1   MSSLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSS 60
           M +  D KPA+AML +QFSYA+V+L  RAAL+QGM+PRVFVVYRQAIAT+ +AP+A+ S 
Sbjct: 1   MGAFEDSKPALAMLGMQFSYAIVSLIIRAALIQGMSPRVFVVYRQAIATVVIAPLAHFS- 59

Query: 61  RKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASI 120
           RK   +SMGLRSFSL+F  +L+GVTINQN + EGLYLASSSMASAMGNL+PAITFVMA +
Sbjct: 60  RKSGGTSMGLRSFSLVFSASLIGVTINQNVFAEGLYLASSSMASAMGNLVPAITFVMAFL 119

Query: 121 VGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWL 180
           +GLEKI++ S RS+AKI+GT+ CV GAISMALLRGPKLLNT            SGGE+WL
Sbjct: 120 IGLEKINIRSFRSIAKIVGTVICVSGAISMALLRGPKLLNTTIF--------ESGGEDWL 171

Query: 181 LGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWN 240
           LGCL +FAS  CWS+WLILQVPV+ASYPDHLSLSAW+CFLATLQS    +F E D EAW 
Sbjct: 172 LGCLLIFASTFCWSIWLILQVPVTASYPDHLSLSAWLCFLATLQSGILTLFLEKDLEAWK 231

Query: 241 LHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEI 300
           LHS LE+  C F+G IGSG+SF VQAW IS+RGPLFSAMFNPLCTVIVTILAA+ LHEEI
Sbjct: 232 LHSYLEVVGCLFTGIIGSGISFFVQAWVISQRGPLFSAMFNPLCTVIVTILAAIFLHEEI 291

Query: 301 YTGSLVGAIGVILGLYAVLWGKAKDHFDEEELKLNLQRD-DQAQAVKILRDDSCKVD--L 357
           YTGSL+GA+ VI+GLY VLWGKAKD F +EE K++ + + D+ Q VKI  ++S  V+  L
Sbjct: 292 YTGSLIGAVAVIIGLYIVLWGKAKD-FTKEEDKVDPKLEIDERQTVKITIEESRGVEPVL 350

Query: 358 EEPLLCDKTAE-DYASNIH 375
           EEPLL DK+ + + +SN H
Sbjct: 351 EEPLLSDKSNDIEESSNFH 369

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224091873|ref|XP_002309381.1| predicted protein [Populus trichocarpa] gi|222855357|gb|EEE92904.1| predicted protein [Populus trichocarpa]

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 222/324 (68%), Positives = 260/324 (80%), Gaps = 9/324 (2%)

Query: 8   KPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSS 67
           KP +AM  LQFSYA+V+L TRAAL+ GM+PRVFVVYRQAIATL + P++Y S RK   +S
Sbjct: 1   KPTLAMFGLQFSYAIVSLITRAALIHGMSPRVFVVYRQAIATLVIVPVSYFSRRKSAGTS 60

Query: 68  MGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKID 127
           +GLRSF L+F  + +GVTINQN + EGLYLASSSMASAMGNL+PAITFVMA  +GLEKI 
Sbjct: 61  LGLRSFCLVFSASFIGVTINQNVFAEGLYLASSSMASAMGNLVPAITFVMAVALGLEKIK 120

Query: 128 LGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLF 187
           +GS RS+AKI+GT+ CV GAISMALLRGPKLLN             SGGE+WLLGCLF+F
Sbjct: 121 IGSFRSIAKIVGTVICVSGAISMALLRGPKLLNKTIF--------GSGGEDWLLGCLFIF 172

Query: 188 ASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEI 247
            S CCWS+WLILQVP++ASYPDHLSLSAWMCFLATLQS    +F E D +AW LHS LE+
Sbjct: 173 VSTCCWSIWLILQVPLTASYPDHLSLSAWMCFLATLQSGILTLFLEKDLDAWKLHSYLEL 232

Query: 248 FCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVG 307
             C F+ + GSG+SF VQAW I +RGPLFSAMFNPLCTVIVT+LAA+ LHEEIYTG L+G
Sbjct: 233 VGCLFTVS-GSGLSFFVQAWVICQRGPLFSAMFNPLCTVIVTVLAAIFLHEEIYTGGLIG 291

Query: 308 AIGVILGLYAVLWGKAKDHFDEEE 331
            + VI+GLY VLWGKAKD   EE+
Sbjct: 292 GVAVIIGLYIVLWGKAKDFIKEED 315

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453922|ref|XP_004144705.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus]

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 223/370 (60%), Positives = 286/370 (77%), Gaps = 6/370 (1%)

Query: 1   MSSLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSS 60
           M  + +Y PAMAM  LQ +YA++AL +RAALL+GM+PRVFVVYRQA+ATLF+AP+AY S 
Sbjct: 1   MGFVEEYLPAMAMFGLQVTYAIMALLSRAALLKGMSPRVFVVYRQAVATLFIAPIAYFSR 60

Query: 61  RKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASI 120
            K +  S+ LRSFSLIF  +L+GVT+NQN YFEG++L SSSMA+AM NLIPA+TFV+A+I
Sbjct: 61  SKSRRVSLNLRSFSLIFLASLVGVTMNQNVYFEGVFLVSSSMATAMTNLIPAVTFVIATI 120

Query: 121 VGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLN-TEFLPEKSFLFRSS-GGEN 178
           VG+E + +GS+RS+AKI GT+ CV GA+ MALLRGPKLLN T+    KS +F    GG+ 
Sbjct: 121 VGMENLKMGSLRSMAKIGGTVVCVSGAMCMALLRGPKLLNSTQDFGLKSTIFGVEIGGQT 180

Query: 179 -WLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEP-DP 236
            WLLG L LF S CCWS+WLILQVP SASYPD+LSLSAWMC + T+QS    +  EP + 
Sbjct: 181 AWLLGSLCLFCSCCCWSIWLILQVPASASYPDNLSLSAWMCLMGTIQSIILTLLVEPINL 240

Query: 237 EAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLL 296
           + W +HS++E+ C  FSG +GSGV+F VQAWC+SKRGP+FSAMFNPLCT++ TILAA++L
Sbjct: 241 QTWKIHSTIELICYLFSGIVGSGVAFFVQAWCVSKRGPVFSAMFNPLCTIVTTILAAIVL 300

Query: 297 HEEIYTGSLVGAIGVILGLYAVLWGKAKDHFDEEELKLNLQRDDQAQAV-KILRDDSCKV 355
           HEEI+TGSL+G + VI+GLY VLWGKAKD + +   KL     DQ + V + L   + ++
Sbjct: 301 HEEIFTGSLLGGVAVIIGLYIVLWGKAKD-YAKVGAKLEKPSLDQKEEVCESLERSTDQI 359

Query: 356 DLEEPLLCDK 365
           DLEEPLL  +
Sbjct: 360 DLEEPLLSKE 369

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224091869|ref|XP_002309380.1| predicted protein [Populus trichocarpa] gi|222855356|gb|EEE92903.1| predicted protein [Populus trichocarpa]

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/370 (59%), Positives = 273/370 (73%), Gaps = 31/370 (8%)

Query: 1   MSSLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSS 60
           M     YKPAM M+ LQF YA VAL TRAAL++G++P+VFVVYRQ IATL MAP+AY+S 
Sbjct: 1   MGGFDAYKPAMGMVGLQFIYAGVALFTRAALVRGLSPKVFVVYRQGIATLIMAPLAYVSR 60

Query: 61  RKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASI 120
           R                      VT NQN YFEGLYL+SS+ ASA+ NL+PAITFVMA+I
Sbjct: 61  R----------------------VTANQNAYFEGLYLSSSTAASALTNLMPAITFVMAAI 98

Query: 121 VGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWL 180
            GLEK+++ S+R+++KILGT+ CV GAI+MALL+GPKLLNTE LP KSF   S G +NWL
Sbjct: 99  SGLEKVNVRSLRTISKILGTVICVSGAIAMALLKGPKLLNTELLPTKSFF--SPGSDNWL 156

Query: 181 LGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWN 240
           LGCLFLF S+C WSLW++LQVP+SAS PDHL  SAWMCFLA+LQS+  A+F E D  +W 
Sbjct: 157 LGCLFLFGSSCFWSLWMVLQVPISASCPDHLYSSAWMCFLASLQSSMIALFAEKDLTSWK 216

Query: 241 LHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEI 300
           L + LEI  C ++G IG  VSF VQAW IS+RGPLFSAMFNPLCTVIV I +A++LHEE 
Sbjct: 217 LITHLEIASCLYAG-IGLAVSFFVQAWVISQRGPLFSAMFNPLCTVIVGIFSAVVLHEET 275

Query: 301 YTGSLVGAIGVILGLYAVLWGKAKDHFDEEELKLNLQRDDQAQAVKILRDDS-----CKV 355
           Y GSL+GA+ VI+GLYAVLWGKAKD  +E + +++ Q+ +    V++L D+S     CK 
Sbjct: 276 YAGSLIGALAVIIGLYAVLWGKAKD-LEEIKNEMHQQQQNDQSPVQLLIDESPEKKNCKA 334

Query: 356 DLEEPLLCDK 365
           DLE PLL  +
Sbjct: 335 DLEAPLLSSQ 344

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449506258|ref|XP_004162696.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induced protein 5NG4-like [Cucumis sativus]

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 222/370 (60%), Positives = 284/370 (76%), Gaps = 10/370 (2%)

Query: 1   MSSLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSS 60
           M  + +Y PAMAM  LQ +YA++AL +RAALL+GM+PR+FVVYRQA+ATLF+AP+AY S 
Sbjct: 1   MGFVEEYLPAMAMFGLQVTYAIMALLSRAALLKGMSPRIFVVYRQAVATLFIAPIAYFSR 60

Query: 61  RKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASI 120
           R     S+ LRSFSLIF  +L+GVT+NQN YFEG +L SSSMA+AM NLIPA+TFV+A+I
Sbjct: 61  R----VSLNLRSFSLIFLASLVGVTMNQNVYFEGXFLVSSSMATAMTNLIPAVTFVIATI 116

Query: 121 VGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLN-TEFLPEKSFLFRSS-GGEN 178
           VG+E + +GS+RS+AKI GT+ CV GA+ MALLRGPKLLN T+    KS +F    GG+ 
Sbjct: 117 VGMENLKMGSLRSMAKIGGTVVCVSGAMCMALLRGPKLLNSTQDFGLKSTIFGVEIGGQT 176

Query: 179 -WLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEP-DP 236
            WLLG L LF S CCWS+WLILQVP SASYPD+LSLSAWMC + T+QS    +  EP + 
Sbjct: 177 AWLLGSLCLFCSCCCWSIWLILQVPASASYPDNLSLSAWMCLMGTIQSIILTLLVEPINL 236

Query: 237 EAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLL 296
           + W +HS++E+ C  FSG +GSGV+F VQAWC+SKRGP+FSAMFNPLCT++ TILAA++L
Sbjct: 237 QTWKIHSTIELICYLFSGIVGSGVAFFVQAWCVSKRGPVFSAMFNPLCTIVTTILAAIVL 296

Query: 297 HEEIYTGSLVGAIGVILGLYAVLWGKAKDHFDEEELKLNLQRDDQAQAV-KILRDDSCKV 355
           HEEI+TGSL+G + VI+GLY VLWGKAKD + +   KL     DQ + V + L   + ++
Sbjct: 297 HEEIFTGSLLGGVAVIIGLYIVLWGKAKD-YAKVGAKLEKPSLDQKEEVCESLERSTDQI 355

Query: 356 DLEEPLLCDK 365
           DLEEPLL  +
Sbjct: 356 DLEEPLLSKE 365

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574599|ref|XP_002528210.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223532371|gb|EEF34167.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 223/375 (59%), Positives = 279/375 (74%), Gaps = 10/375 (2%)

Query: 1   MSSLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLS- 59
           M    D KP +AM+ LQF YA V+L TRAAL+QGMN RVFVVYRQ IATL MAP+AYLS 
Sbjct: 1   MGRFDDCKPVIAMVGLQFIYAGVSLFTRAALVQGMNTRVFVVYRQGIATLIMAPLAYLSV 60

Query: 60  SRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMAS 119
            RK + SS+GL+ F+ I   +L+G+T NQN YFEGL+L SS+  +AM NLIPAITFVMA+
Sbjct: 61  RRKPRMSSLGLKFFAWISLASLIGITANQNAYFEGLFLTSSTATTAMTNLIPAITFVMAA 120

Query: 120 IVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENW 179
           I G+EK+++ ++RS+AKI+GT+ CV GAISMALL+GPKLLN++ LP  S L  SS G+NW
Sbjct: 121 IFGMEKVNIRNLRSIAKIIGTVICVTGAISMALLKGPKLLNSKLLPPMSTL--SSEGDNW 178

Query: 180 LLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAW 239
           LLGC+FLF S+C WS W+ILQVP+S S PDHL  SAWM FLAT++SA  A+  E +  AW
Sbjct: 179 LLGCIFLFGSSCFWSFWMILQVPISESCPDHLYSSAWMGFLATIESAIIALSLEKNGAAW 238

Query: 240 NLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEE 299
            L+S LE+ CC ++G +G  VSF +QAWCIS+RGPLFSAMFNPLCTVI  I+AA+ LHEE
Sbjct: 239 KLNSYLEMGCCLYAG-VGLAVSFFLQAWCISQRGPLFSAMFNPLCTVITAIIAAIFLHEE 297

Query: 300 IYTGSLVGAIGVILGLYAVLWGKAKDHFD-EEELKLNLQRDDQAQAVKILRDDS-----C 353
            Y GSL+GA+ VI+GLY VLWGKAKD  +  +   L LQ D       I+ D+S     C
Sbjct: 298 TYLGSLIGALAVIIGLYVVLWGKAKDLEEVNKGTHLKLQNDGSGIVQVIVDDESFEKKNC 357

Query: 354 KVDLEEPLLCDKTAE 368
           + DLEEP +  K+A 
Sbjct: 358 RADLEEPFISHKSAN 372

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15234742|ref|NP_194771.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|7269943|emb|CAB79760.1| nodulin-like protein [Arabidopsis thaliana] gi|332660363|gb|AEE85763.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 218/374 (58%), Positives = 265/374 (70%), Gaps = 16/374 (4%)

Query: 11  MAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKS--SSM 68
           MAM  +Q  YA V L  RA L+ G++PRVF++YRQA AT+F+ P  YLS RK K   SS+
Sbjct: 1   MAMTMIQLCYAGVTLFARATLVHGLSPRVFILYRQAFATIFIFPFLYLSRRKSKIAISSL 60

Query: 69  GLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDL 128
            L+SFSLIF ++L+G+TINQN Y EGLYL SSSM SA+GN+IPAITF+++ + G EK++L
Sbjct: 61  DLKSFSLIFLVSLIGITINQNLYLEGLYLTSSSMGSAVGNIIPAITFLISFLAGYEKLNL 120

Query: 129 GSVRSVAKILGTIFCVGGAISMALLRGPKLLNTE-FLP-EKSFLFRSSGGENWLLGCLFL 186
             +R +AKI GTI CV GAISM LLRGPK+LN+E  LP  KS L        WL+GCLFL
Sbjct: 121 RDIRGLAKIAGTILCVAGAISMTLLRGPKILNSESALPIAKSVLGHLKDQNTWLIGCLFL 180

Query: 187 FASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLE 246
           F+S  CWS WLILQVP+SA YPD+LSLSAWMC   T+Q A    F E DP AW LHS  E
Sbjct: 181 FSSTLCWSFWLILQVPISAYYPDNLSLSAWMCLFGTIQCAVVTFFLEKDPNAWILHSYSE 240

Query: 247 IFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLV 306
              C ++G   S +SF VQAW I+KRGP+FSA+FNPLCTVIVTILAAL  HEEIYTGSL+
Sbjct: 241 FATCLYAGIGASALSFTVQAWAIAKRGPVFSALFNPLCTVIVTILAALFFHEEIYTGSLI 300

Query: 307 GAIGVILGLYAVLWGKAKDHFDEEELKLNLQRD-DQAQAVKILRDDS-----CKVDLEEP 360
           G +GVILGLY VLWGKAKD    ++     QRD DQ   VKI  +DS     C  DL+ P
Sbjct: 301 GGLGVILGLYTVLWGKAKDVMMNQD-----QRDNDQKSEVKIHIEDSSNTTICNKDLKNP 355

Query: 361 LLCD-KTAEDYASN 373
           LL   K+ E+  ++
Sbjct: 356 LLSKHKSTEEIQTH 369

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802988|ref|XP_002869378.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297315214|gb|EFH45637.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/374 (57%), Positives = 264/374 (70%), Gaps = 15/374 (4%)

Query: 11  MAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKS--SSM 68
           MAM  +Q  YA V L  RA L+ G++PRVF++YRQA AT+F+ P  YLS RK K   SS+
Sbjct: 1   MAMTMIQLCYAGVTLFARATLVHGLSPRVFILYRQAFATIFIFPFLYLSRRKSKIAISSL 60

Query: 69  GLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDL 128
            L+SFSLIF ++L+G+TINQN Y EGLYL SSSM SA+GN+IPAITF+++ + G EK+++
Sbjct: 61  DLKSFSLIFLVSLIGITINQNLYLEGLYLTSSSMGSAVGNIIPAITFLISFLAGYEKLNI 120

Query: 129 GSVRSVAKILGTIFCVGGAISMALLRGPKLLNTE-FLP-EKSFLFRSSGGENWLLGCLFL 186
             +R +AKI GTI CV GAISM LLRGPK+LN+E  LP +KS L        WL+GCLFL
Sbjct: 121 RDIRGLAKIAGTILCVAGAISMTLLRGPKILNSESALPIDKSVLGNLKDQNTWLIGCLFL 180

Query: 187 FASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLE 246
           F+S  CWS WLILQVP+SA YPD+LSLSAWMC   T+Q A    F E DP AW LHS  E
Sbjct: 181 FSSTLCWSFWLILQVPISAYYPDNLSLSAWMCLFGTIQCAVVTFFLEKDPNAWILHSYSE 240

Query: 247 IFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLV 306
              C ++G   S +SF VQAW I+KRGP+FSA+FNPLCTVIVTILAAL   EEIYTGSL+
Sbjct: 241 FATCLYAGIGASALSFTVQAWAIAKRGPVFSALFNPLCTVIVTILAALFFQEEIYTGSLL 300

Query: 307 GAIGVILGLYAVLWGKAKDHFDEEELKLNLQRD-DQAQAVKILRDDS-----CKVDLEEP 360
           G +GVI+GLY VLWGKAKD    ++     QRD DQ   VKI  +DS     C  DL+ P
Sbjct: 301 GGLGVIMGLYTVLWGKAKDVMINQD-----QRDNDQNSEVKIHIEDSSNTIICNRDLKNP 355

Query: 361 LLCDKTAEDYASNI 374
           LL +   +  + +I
Sbjct: 356 LLSNTNQQKKSKHI 369

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357512833|ref|XP_003626705.1| Auxin-induced protein 5NG4 [Medicago truncatula] gi|355520727|gb|AET01181.1| Auxin-induced protein 5NG4 [Medicago truncatula]

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 208/363 (57%), Positives = 269/363 (74%), Gaps = 7/363 (1%)

Query: 7   YKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSS 66
           Y P M M+ +QF YA + L  R  LL+GM+P VFVVYR A AT+F+AP+AY S R   S 
Sbjct: 9   YMPIMVMVLIQFIYAGMNLGIRVTLLEGMSPNVFVVYRSAFATIFLAPIAYFSGRNSASY 68

Query: 67  SMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKI 126
           S+ LRSFSLIF  +  GVT+ QN YFEGLYL+SSS+ASAM NLIPA+TFV+A +  +EK+
Sbjct: 69  SLNLRSFSLIFMTSGRGVTLTQNLYFEGLYLSSSSIASAMTNLIPAVTFVIAVLARMEKV 128

Query: 127 DLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTE-FLPEKSFLFRSSGGEN-WLLGCL 184
           ++ S+R++AKI+GT+ CV GA+S+ALL+GPKLLN E  LP KS +  +SG ++ WLLGC+
Sbjct: 129 NIRSLRTIAKIVGTLICVCGALSIALLKGPKLLNAENILPTKSIMAITSGSDDSWLLGCV 188

Query: 185 FLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSS 244
           +L  S+  WSLWLILQVP  AS+P++LSLSAWMCF+ATLQSA   +F EPD  AW ++S 
Sbjct: 189 YLLGSSVAWSLWLILQVPAYASHPNYLSLSAWMCFMATLQSALVTLFLEPDLNAWKINSL 248

Query: 245 LEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGS 304
           L+  C  ++G +GS   FC+QAWCI+KRGPLFSA+F+PL T++VTILA LLLHEEIY GS
Sbjct: 249 LQFGCALYAGIMGSAFVFCLQAWCITKRGPLFSAVFSPLLTILVTILAVLLLHEEIYIGS 308

Query: 305 LVGAIGVILGLYAVLWGKAKDHFDEEELKLNLQRDDQAQAVKILRDDSCKVDLEEPLLCD 364
           L+GAIGVI+GLY VLWGKA+D    ++         Q + VKIL       DL+E LL D
Sbjct: 309 LIGAIGVIIGLYVVLWGKAEDVVHVKQKIDPKSMVTQTEEVKIL-----ITDLKETLLAD 363

Query: 365 KTA 367
           ++ 
Sbjct: 364 EST 366

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574601|ref|XP_002528211.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223532372|gb|EEF34168.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/371 (57%), Positives = 275/371 (74%), Gaps = 17/371 (4%)

Query: 8   KPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRK--YKS 65
           +P MA++ LQ   A +AL  RAALLQG+N   FVVYR AIATL +AP++Y+S+R+  YK+
Sbjct: 10  RPVMALIGLQLMNAGIALFIRAALLQGLNSMAFVVYRHAIATLIIAPLSYVSTRRISYKT 69

Query: 66  SSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEK 125
             + LRSF+ IF +A LG+T NQ  YFEGL+LASS++ SA  NLIPAITFVMA+I+G+EK
Sbjct: 70  P-LRLRSFAWIF-LASLGLTANQFLYFEGLHLASSTVGSATNNLIPAITFVMATILGMEK 127

Query: 126 IDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGEN---WLLG 182
           + + S+RS+AKI+GTIFCV GAISMA L+GPKLLNTE  P KS    SSG E+   WLLG
Sbjct: 128 VKVVSLRSMAKIIGTIFCVSGAISMAFLKGPKLLNTELQPPKS----SSGIESDNYWLLG 183

Query: 183 CLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLH 242
           CL LF S+C +SLW+ILQVP+SAS PDHL  SAWM FL T++SA   +    D  AWNL+
Sbjct: 184 CLLLFGSSCFYSLWMILQVPISASCPDHLYSSAWMGFLVTIESAAVTLLVTKDSAAWNLN 243

Query: 243 SSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYT 302
           S LEI  C ++G + S + F +QAWCIS+RGPLF+AMFNPL TVIVTI+AA+ LHEE Y 
Sbjct: 244 SYLEISSCLYAGIVQSLI-FFIQAWCISQRGPLFAAMFNPLSTVIVTIIAAVFLHEETYV 302

Query: 303 GSLVGAIGVILGLYAVLWGKAKDHFD-EEELKLNLQRDD----QAQAVKILRDDSCKVDL 357
           GSL+GA+ VI+GLY VLWGKAKDH + ++++ L LQ D+    Q  A + L   +C  DL
Sbjct: 303 GSLIGALAVIIGLYIVLWGKAKDHEEIKKDMHLELQNDNSSILQVTADESLEKRNCTADL 362

Query: 358 EEPLLCDKTAE 368
           E PL+  K+ +
Sbjct: 363 EVPLISHKSVD 373

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	375
TAIR|locus:2118686	373	UMAMIT34 "AT4G30420" [Arabidop	0.944	0.949	0.572	9.5e-105
TAIR|locus:2132982	359	UMAMIT33 "Usually multiple aci	0.917	0.958	0.476	5.8e-82
TAIR|locus:2005689	389	WAT1 "Walls Are Thin 1" [Arabi	0.944	0.910	0.370	1.8e-62
UNIPROTKB|Q6J163	410	Q6J163 "Auxin-induced protein	0.832	0.760	0.391	5.7e-59
TAIR|locus:2039792	374	UMAMIT14 "AT2G39510" [Arabidop	0.858	0.860	0.392	6.6e-58
TAIR|locus:2092702	383	UMAMIT4 "AT3G18200" [Arabidops	0.872	0.853	0.374	2.2e-57
TAIR|locus:2058460	394	UMAMIT11 "Usually multiple aci	0.88	0.837	0.365	6.1e-55
TAIR|locus:2176065	359	UMAMIT21 "AT5G64700" [Arabidop	0.906	0.947	0.352	7.8e-55
TAIR|locus:2194864	370	SIAR1 "Siliques Are Red 1" [Ar	0.88	0.891	0.346	2.1e-54
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.864	0.805	0.352	4.9e-53

TAIR|locus:2118686 UMAMIT34 "AT4G30420" [Arabidopsis thaliana (taxid:3702)]

 Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
 Identities = 212/370 (57%), Positives = 256/370 (69%)

Query:    11 MAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKS--SSM 68
             MAM  +Q  YA V L  RA L+ G++PRVF++YRQA AT+F+ P  YLS RK K   SS+
Sbjct:     1 MAMTMIQLCYAGVTLFARATLVHGLSPRVFILYRQAFATIFIFPFLYLSRRKSKIAISSL 60

Query:    69 GLRSFSLIFFIALLGVTINQNTYFEGLYLXXXXXXXXXGNLIPAITFVMASIVGLEKIDL 128
              L+SFSLIF ++L+G+TINQN Y EGLYL         GN+IPAITF+++ + G EK++L
Sbjct:    61 DLKSFSLIFLVSLIGITINQNLYLEGLYLTSSSMGSAVGNIIPAITFLISFLAGYEKLNL 120

Query:   129 GSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEF-LP-EKSFLFRSSGGENWLLGCLFL 186
               +R +AKI GTI CV GAISM LLRGPK+LN+E  LP  KS L        WL+GCLFL
Sbjct:   121 RDIRGLAKIAGTILCVAGAISMTLLRGPKILNSESALPIAKSVLGHLKDQNTWLIGCLFL 180

Query:   187 FASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLE 246
             F+S  CWS WLILQVP+SA YPD+LSLSAWMC   T+Q A    F E DP AW LHS  E
Sbjct:   181 FSSTLCWSFWLILQVPISAYYPDNLSLSAWMCLFGTIQCAVVTFFLEKDPNAWILHSYSE 240

Query:   247 IFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLV 306
                C ++G   S +SF VQAW I+KRGP+FSA+FNPLCTVIVTILAAL  HEEIYTGSL+
Sbjct:   241 FATCLYAGIGASALSFTVQAWAIAKRGPVFSALFNPLCTVIVTILAALFFHEEIYTGSLI 300

Query:   307 GAIGVILGLYAVLWGKAKDHFDEEELKLNLQRD-DQAQAVKILRDDS-----CKVDLEEP 360
             G +GVILGLY VLWGKAKD    ++     QRD DQ   VKI  +DS     C  DL+ P
Sbjct:   301 GGLGVILGLYTVLWGKAKDVMMNQD-----QRDNDQKSEVKIHIEDSSNTTICNKDLKNP 355

Query:   361 LLCD-KTAED 369
             LL   K+ E+
Sbjct:   356 LLSKHKSTEE 365

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2132982 UMAMIT33 "Usually multiple acids move in and out Transporters 33" [Arabidopsis thaliana (taxid:3702)]

 Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
 Identities = 174/365 (47%), Positives = 238/365 (65%)

Query:     7 YKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSS-RKYKS 65
             YK  +A++ LQF+ A VAL T+AA ++G+NP VFVVYRQAIATLF+ P++++S+ RK   
Sbjct:     6 YKAVLALVMLQFTSAGVALFTKAAFMEGLNPTVFVVYRQAIATLFICPISFISAWRKENK 65

Query:    66 SSMGLRSFSLIFFIALLGVTINQNTYFEGLYLXXXXXXXXXGNLIPAITFVMASIVGLEK 125
              S+G+R F  +   A++GVT+NQN YF+G+ L          NLIPA+TF+++ IVG E 
Sbjct:    66 PSLGVRGFWWVALTAVIGVTVNQNAYFKGIDLSSSSMACAMTNLIPAVTFIISIIVGFES 125

Query:   126 IDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLF 185
             I   S++SVAK++GT  CVGGA++M  LRGPKLLN            +     WLLGC F
Sbjct:   126 IKRRSMKSVAKVIGTGVCVGGAMAMTFLRGPKLLNA---------LLNQDNTAWLLGCFF 176

Query:   186 LFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIF---TEPDPEAWNLH 242
             L  S   WSLWLILQVP+++  PDHL  SA  CF+AT+ S   A+    T   P  W L 
Sbjct:   177 LLISTFAWSLWLILQVPIASHCPDHLYTSACTCFIATIASFLVALALGNTHLPP--WKLD 234

Query:   243 SSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYT 302
             S L++ CC +SG     +SF +QAW +S++GP+FSA+FNPL  VIVT   AL L E+ Y 
Sbjct:   235 SFLKLSCCIYSG-FQLAISFFLQAWIVSQKGPVFSALFNPLSAVIVTFFGALYLKEQTYL 293

Query:   303 GSLVGAIGVILGLYAVLWGKAKDHFDEE-ELKLNLQRDDQAQA--VKILRDDSC--KVDL 357
             GSL+GA+ +ILGLY VLWGK++D+ +E  +LKL  + +  +Q+  V I+  D      +L
Sbjct:   294 GSLLGALAIILGLYIVLWGKSEDYQEESTDLKLENEHNTSSQSDIVSIMIGDKAFRSSEL 353

Query:   358 EEPLL 362
              EPLL
Sbjct:   354 LEPLL 358

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2005689 WAT1 "Walls Are Thin 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 136/367 (37%), Positives = 205/367 (55%)

Query:    11 MAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGL 70
             +AML LQF YA   + +RAAL  G++  VF VYR  IA L + P AY   +K + + + L
Sbjct:    22 IAMLTLQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKKERPA-ITL 80

Query:    71 RSFSLIFFIALLGVTINQNTYFEGLYLXXXXXXXXXGNLIPAITFVMASIVGLEKIDLGS 130
                   FF+AL+G+T NQ  Y  GL            N +PAITF+MA+++ +EK+ +  
Sbjct:    81 NFLIQFFFLALIGITANQGFYLLGLDNTSPTFASSMQNSVPAITFLMAALLRIEKVRINR 140

Query:   131 VRSVAKILGTIFCVGGAISMALLRGPKL------LNTEFLPEKSFLFRSSGG---ENWLL 181
                ++KILGT  CV GA  + L +GP +      L+   L   S +    G    +NW L
Sbjct:   141 RDGISKILGTALCVAGASVITLYKGPTIYTPASHLHAHLLTTNSAVLAPLGNAAPKNWTL 200

Query:   182 GCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNL 241
             GC++L      WS WL+ Q PV  SYP  LS++++ CF   +Q    A F E D +AW  
Sbjct:   201 GCIYLIGHCLSWSGWLVFQAPVLKSYPARLSVTSYTCFFGIIQFLIIAAFCERDSQAWVF 260

Query:   242 HSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIY 301
             HS  E+F   ++G + SG++F VQ WCI + GP+F A++ P+ T++V I+A++ L EE Y
Sbjct:   261 HSGWELFTILYAGIVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIALGEEFY 320

Query:   302 TGSLVGAIGVILGLYAVLWGKAKDH-FDE-EELKLNLQRDDQAQAVKILRDDSCKVDLEE 359
              G ++GA+ +I GLY VL+GK+++  F   E+  +    +   +   + R+ S K  +  
Sbjct:   321 LGGIIGAVLIIAGLYFVLYGKSEERKFAALEKAAIQSSAEHGIERAPVSRN-SIKSSITT 379

Query:   360 PLLCDKT 366
             PLL   T
Sbjct:   380 PLLHQST 386

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0090355 "positive regulation of auxin metabolic process" evidence=IMP

GO:0090358 "positive regulation of tryptophan metabolic process" evidence=IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

UNIPROTKB|Q6J163 Q6J163 "Auxin-induced protein 5NG4" [Pinus taeda (taxid:3352)]

 Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
 Identities = 127/324 (39%), Positives = 190/324 (58%)

Query:    12 AMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLR 71
             AMLALQF YA   + +RAAL  G++  VF VYR  +A + + P AY   +K + + + L 
Sbjct:    22 AMLALQFGYAGFHIVSRAALNMGVSKVVFPVYRNILALMLIGPCAYFLEKKERPA-LTL- 79

Query:    72 SFSLIFFI-ALLGVTINQNTYFEGLYLXXXXXXXXXGNLIPAITFVMASIVGLEKIDLGS 130
             SF + FF+ AL G+T         + L          N +PAITF+MA+ + LEK+ +  
Sbjct:    80 SFLIQFFLLALCGITGQSRILSLRIVLHIPTFASAIQNSVPAITFIMAAALRLEKVHISR 139

Query:   131 VRSVAKILGTIFCVGGAISMALLRGPKLL-----NTEFLPE--KSFLFR--SSGGENWLL 181
                +AKI+GT+ CV GA  + L +GP +      N E      K+F     S+  ENW L
Sbjct:   140 RDGLAKIIGTVACVSGATIITLYKGPPITHIWRPNLEVTASYFKAFQGNDLSAKSENWTL 199

Query:   182 GCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNL 241
             GC++L  +   WS W++LQ PV   YP  LS++++ CF   +Q    A F E D E W +
Sbjct:   200 GCIYLLGNCLAWSGWIVLQAPVLKRYPARLSVTSFTCFFGVIQFLIIAAFFETDLEHWKI 259

Query:   242 HSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIY 301
             HS  E+F   ++G + SG++F VQ WCI + GP+F A++ P+ T+ V I+A+++L E+ Y
Sbjct:   260 HSGGELFTILYAGFVASGIAFSVQIWCIDRGGPVFVAVYQPVQTIAVAIMASIILGEQFY 319

Query:   302 TGSLVGAIGVILGLYAVLWGKAKD 325
              G + GAI +I+GLY VLWGK+++
Sbjct:   320 LGGIFGAILIIIGLYLVLWGKSEE 343

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=NAS

GO:0005938 "cell cortex" evidence=IDA

GO:0006810 "transport" evidence=NAS

GO:0009734 "auxin mediated signaling pathway" evidence=IDA

TAIR|locus:2039792 UMAMIT14 "AT2G39510" [Arabidopsis thaliana (taxid:3702)]

 Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
 Identities = 128/326 (39%), Positives = 192/326 (58%)

Query:     3 SLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRK 62
             +L+ +KP + +++LQF YA +++  + AL QGM+P V   YR  +AT+F+AP AY   RK
Sbjct:     2 ALKTWKPFITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRK 61

Query:    63 YKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLXXXXXXXXXGNLIPAITFVMASIVG 122
              +   M L  F  I  + LL  TI+QN Y+ G+            N++PA  F+MA I  
Sbjct:    62 IRPK-MTLSIFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFR 120

Query:   123 LEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGG-ENWLL 181
             LEK+++  + S AKILGTI  VGGA+ M +++GP +      P       S+ G +  L 
Sbjct:   121 LEKVNVKKIHSQAKILGTIVTVGGAMLMTVVKGPLIPLPWANPHDIHQDSSNTGVKQDLT 180

Query:   182 GCLFLFASAC-CWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEP-DPEAW 239
                 L A  C CW+ ++ LQ     SYP  LSL+A++CFL +++S   A+F E  +P AW
Sbjct:   181 KGASLIAIGCICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSAW 240

Query:   240 NLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEE 299
              +H   ++    + G I SG+ + VQ   +  RGP+F   FNPL  VIV IL +++L E 
Sbjct:   241 AIHLDSKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIILAEV 300

Query:   300 IYTGSLVGAIGVILGLYAVLWGKAKD 325
             ++ G ++GAI ++LGLY+VLWGK+KD
Sbjct:   301 MFLGRILGAIVIVLGLYSVLWGKSKD 326

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2092702 UMAMIT4 "AT3G18200" [Arabidopsis thaliana (taxid:3702)]

 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 125/334 (37%), Positives = 187/334 (55%)

Query:     8 KPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSS 67
             K  +A++ LQF +A   + +R AL  G++  V+ VYR  +A L + P AY   +K +   
Sbjct:    34 KLVVALITLQFCFAGFHIVSRVALNIGVSKVVYPVYRNLLALLLIGPFAYFFEKKERPP- 92

Query:    68 MGLRSFSLIFFIALLGVTINQNTYFEGLYLXXXXXXXXXGNLIPAITFVMASIVGLEKID 127
             + +   +  FF+AL+G+T NQ  Y  GLY           N +PAITF+MA  + LE ID
Sbjct:    93 LTISLLAQFFFLALIGITANQGFYLLGLYYATPTFASAMQNSVPAITFIMACALRLEHID 152

Query:   128 LGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLF 187
             L     VAK+LGT+  +GGA  + L RG  + +     +K  +  S    +  LG L+L 
Sbjct:   153 LVRKHGVAKVLGTLVSIGGATVITLYRGFPIFDQGLNMQKEEVVGSDNSHSLTLGWLYLM 212

Query:   188 ASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEI 247
                  W+ W++LQ PV   YP  L+L+++ CF   +Q    A+F E D   W + S  E+
Sbjct:   213 GHCLSWAGWMVLQAPVLKQYPAKLTLTSFTCFFGLIQFLVIALFVETDLNNWIIVSWEEL 272

Query:   248 FCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVG 307
             F   ++G I SG+   +Q WCI K GP+F A+F PL T++V  +A L+L +++Y+G +VG
Sbjct:   273 FTILYAGIIASGLVVYLQTWCIYKSGPVFVAVFQPLQTLLVAAMAFLILGDQLYSGGIVG 332

Query:   308 AIGVILGLYAVLWGKAKDHFDEEELKLNLQRDDQ 341
             A+ ++LGLY VLWGK       EE KL L+   Q
Sbjct:   333 AVFIMLGLYLVLWGK------NEERKLALEESQQ 360

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2058460 UMAMIT11 "Usually multiple acids move in and out Transporters 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
 Identities = 124/339 (36%), Positives = 190/339 (56%)

Query:     8 KPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSS 67
             KP  AM+ LQF YA + L T+  L +GM+  V V YR A AT  +AP A LS RK +S  
Sbjct:    10 KPYFAMVCLQFGYAGMNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRSK- 68

Query:    68 MGLRSFSLIFFIALLGVTINQNTYFEGLYLXXXXXXXXXGNLIPAITFVMASIVGLEKID 127
             M    F  IF +ALLG  I+QN Y+ GL L          N++PAIT ++A++  +EK++
Sbjct:    69 MTFPIFMRIFLLALLGPVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILATLFRMEKVE 128

Query:   128 LGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLF 187
             +  VR + K++GT+  V G+I M   +GP  +N  F         S    ++L   +FL 
Sbjct:   129 MRKVRCLVKVMGTLVTVVGSILMIFYKGP-FIN--FFRSHLTAASSPPTADYLKAAVFLL 185

Query:   188 ASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEI 247
              ++  W+ + +LQ      Y  HLS+S  +CF+ TLQS   A   E +P A N+   + +
Sbjct:   186 LASLSWASFFVLQAATLKKYSAHLSMSTMVCFMGTLQSLALAFVMEHNPSALNIGFDMNL 245

Query:   248 FCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVG 307
                 ++G + S +++ VQ   + ++GP+F   FNPL  VIV+I++  +L + IY G ++G
Sbjct:   246 LASAYAGIMSSSIAYYVQGLMMQRKGPVFVTAFNPLIVVIVSIMSFFVLGQGIYLGGVIG 305

Query:   308 AIGVILGLYAVLWGKAKDHFDEEELKLNLQRDDQAQAVK 346
              + +++G+YAVLWGK  D  D EE +     +D   AVK
Sbjct:   306 VVVLMVGVYAVLWGKHVDD-DGEETR----HEDNVVAVK 339

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2176065 UMAMIT21 "AT5G64700" [Arabidopsis thaliana (taxid:3702)]

 Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
 Identities = 124/352 (35%), Positives = 198/352 (56%)

Query:     8 KPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSS 67
             KP + +  +Q  Y ++ L ++A    GMN  VFV YRQA AT+F+AP+A+   RK  +  
Sbjct:     7 KPYLMVTIIQVIYTIMFLISKAVFNGGMNTFVFVFYRQAFATIFLAPLAFFFERK-SAPP 65

Query:    68 MGLRSFSLIFFIALLGVTINQNTYFEGLYLXXXXXXXXXGNLIPAITFVMASIVGLEKID 127
             +   +F  IF ++L GVT++ +     L              +PAITF +A + G+E++ 
Sbjct:    66 LSFVTFIKIFMLSLFGVTLSLDLNGIALSYTSATLAAATTASLPAITFFLALLFGMERLK 125

Query:   128 LGSVRSVAKILGTIFCVGGAISMALLRGPKL---LNTEFL-----PEKSFLFRSSGGE-N 178
             + S++  AK++G   C+GG I +A+ +GP L   L   F      P ++     SGG  +
Sbjct:   126 VKSIQGTAKLVGITVCMGGVIILAIYKGPLLKLPLCPHFYHGQEHPHRNNPGHVSGGSTS 185

Query:   179 WLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEA 238
             WL GC+ +  S   W LWL+LQ  V   YP  L  +   C L+++QS   AI  E D  A
Sbjct:   186 WLKGCVLMITSNILWGLWLVLQGRVLKVYPSKLYFTTLHCLLSSIQSFVIAIALERDISA 245

Query:   239 WNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHE 298
             W L  +L +    + G I +GV++ +Q+W I KRGP+F +MF PL  +   + +A+LL E
Sbjct:   246 WKLGWNLRLVAVIYCGFIVTGVAYYLQSWVIEKRGPVFLSMFTPLSLLFTLLSSAILLCE 305

Query:   299 EIYTGSLVGAIGVILGLYAVLWGKAKDHFDEEELKLNLQRDDQA--QAVKIL 348
              I  GS+VG + +I+GLY VLWGK+++  +  + K++LQ+++      VK++
Sbjct:   306 IISLGSIVGGLLLIIGLYCVLWGKSREEKNSGDDKIDLQKENDVVCNEVKVV 357

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2194864 SIAR1 "Siliques Are Red 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
 Identities = 116/335 (34%), Positives = 189/335 (56%)

Query:     3 SLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRK 62
             S+   KP +A+++LQF YA + + T  +   GM+  V   YR  +AT+ MAP A +  RK
Sbjct:     5 SMEKIKPILAIISLQFGYAGMYIITMVSFKHGMDHWVLATYRHVVATVVMAPFALMFERK 64

Query:    63 YKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLXXXXXXXXXGNLIPAITFVMASIVG 122
              +   M L  F  +  + +L   ++QN Y+ GL            N +PA+TF++A I  
Sbjct:    65 IRPK-MTLAIFWRLLALGILEPLMDQNLYYIGLKNTSASYTSAFTNALPAVTFILALIFR 123

Query:   123 LEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSG---GENW 179
             LE ++   V SVAK++GT+  VGGA+ M L +GP +   +     SF   SS    G++W
Sbjct:   124 LETVNFRKVHSVAKVVGTVITVGGAMIMTLYKGPAIEIVK-AAHNSFHGGSSSTPTGQHW 182

Query:   180 LLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAW 239
             +LG + +  S   W+ + ILQ      YP  LSL   +C + T+ +A  ++    DP AW
Sbjct:   183 VLGTIAIMGSISTWAAFFILQSYTLKVYPAELSLVTLICGIGTILNAIASLIMVRDPSAW 242

Query:   240 NLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEE 299
              +          +SG + SG+++ +Q+  I +RGP+F+  F+P+C +I   L AL+L E+
Sbjct:   243 KIGMDSGTLAAVYSGVVCSGIAYYIQSIVIKQRGPVFTTSFSPMCMIITAFLGALVLAEK 302

Query:   300 IYTGSLVGAIGVILGLYAVLWGKAKDHFDEEELKL 334
             I+ GS++GA+ ++LGLY+V+WGK+KD  +  + K+
Sbjct:   303 IHLGSIIGAVFIVLGLYSVVWGKSKDEVNPLDEKI 337

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=IDA

GO:0015171 "amino acid transmembrane transporter activity" evidence=IDA

GO:0032973 "amino acid export" evidence=IDA

GO:0034639 "L-amino acid efflux transmembrane transporter activity" evidence=IDA

GO:0043090 "amino acid import" evidence=IDA

GO:0080144 "amino acid homeostasis" evidence=IMP

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 118/335 (35%), Positives = 189/335 (56%)

Query:     2 SSLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSR 61
             S L   KP  AM++LQF YA + + T+ +L  GM+  V VVYR AIAT  +AP A+   R
Sbjct:    11 SFLTSSKPYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFER 70

Query:    62 KYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLXXXXXXXXXGNLIPAITFVMASIV 121
             K +   +    F  +F + LLG  I+QN Y+ GL            N++PA+TF++A + 
Sbjct:    71 KAQPK-ITFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLF 129

Query:   122 GLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGP--KLLNTEFL--PEKSFLF-----R 172
              +E +DL  +   AKI GT+  V GA+ M + +GP  +L  T+++   + S         
Sbjct:   130 RMEMLDLKKLWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKN 189

Query:   173 SSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDH-LSLSAWMCFLATLQSATFAIF 231
             SS  + +L G + L  +   W+   +LQ  +  +Y  H LSL+  +CF+ TLQ+      
Sbjct:   190 SSSDKEFLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFV 249

Query:   232 TEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTIL 291
              E +P AW +   + +    +SG + S +S+ VQ   + KRGP+F+  F+PL  VIV ++
Sbjct:   250 MEHNPSAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVM 309

Query:   292 AALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKDH 326
              + +L E+I+ G ++GA+ +++GLYAVLWGK K++
Sbjct:   310 GSFVLAEKIFLGGVIGAVLIVIGLYAVLWGKQKEN 344

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9M0B8	WTR37_ARATH	No assigned EC number	0.5828	0.9546	0.9597	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	375
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	2e-42
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	4e-10
pfam00892	126	pfam00892, EamA, EamA-like transporter family	8e-06
pfam00892	126	pfam00892, EamA, EamA-like transporter family	2e-05
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	0.001

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  150 bits (381), Expect = 2e-42
 Identities = 99/327 (30%), Positives = 174/327 (53%), Gaps = 15/327 (4%)

Query: 12  AMLALQFSYAVVALST--RAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMG 69
           AMLA + S  VV +ST  + A  +G+N   F+ Y   +A+L + P  + ++R   S S+ 
Sbjct: 17  AMLATETS--VVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNR---SRSLP 71

Query: 70  LRSFSLIFFIALLGV--TINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKID 127
             S S++  I LLG   ++   T + G+  ++ ++ASA+ N+ PA+TF++A I  +EK+ 
Sbjct: 72  PLSVSILSKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVS 131

Query: 128 LGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFR----SSGGENWLLGC 183
                SVAK++GTI  + GA+ +    GP++      P  +F       SS   +WL+G 
Sbjct: 132 FKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGG 191

Query: 184 LFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPD-PEAWNLH 242
             L       S+  ILQ  + + YP   ++S       ++ ++   +  E + P  W +H
Sbjct: 192 ALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIH 251

Query: 243 SSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYT 302
             + +     + AI + V + + +W +  +GPL+ A+F PL  +I  ++ A+ L++ +Y 
Sbjct: 252 FDITLIT-IVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYL 310

Query: 303 GSLVGAIGVILGLYAVLWGKAKDHFDE 329
           G L+G I + LG YAV+WGKA +  D+
Sbjct: 311 GCLIGGILITLGFYAVMWGKANEEKDQ 337

Length = 358

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 59.9 bits (145), Expect = 4e-10
 Identities = 69/315 (21%), Positives = 122/315 (38%), Gaps = 32/315 (10%)

Query: 10  AMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMG 69
            +A+L     + +  ++ + A+            R  IA L + P+  L  R  +     
Sbjct: 9   LLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRP---A 65

Query: 70  LRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLG 129
           LR + L+  +ALLG+ +     F  L   S+S+AS +  L+P  T ++A ++ L     G
Sbjct: 66  LRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLL-----G 120

Query: 130 SVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFAS 189
              S+ +ILG +  + G + + L                      GG   LLG L   A+
Sbjct: 121 ERLSLLQILGILLALAGVLLILL------------------GGGGGGILSLLGLLLALAA 162

Query: 190 ACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFC 249
           A  W+L+  L   +S   P      A +  L          F           + L +  
Sbjct: 163 ALLWALYTALVKRLSRLGP---VTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLL- 218

Query: 250 CFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAI 309
             + G   +G+++ +  + +   G    A+ + L  V   +L  LLL E +    L+GA 
Sbjct: 219 --YLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAA 276

Query: 310 GVILGLYAVLWGKAK 324
            V+LG+        +
Sbjct: 277 LVVLGVLLASLRARR 291

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 44.5 bits (106), Expect = 8e-06
 Identities = 28/118 (23%), Positives = 58/118 (49%), Gaps = 8/118 (6%)

Query: 31  LLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNT 90
           LL+ ++P  F  YR  IA + +  + +L   +   + + L++   + ++ L G  +    
Sbjct: 13  LLERISPLTFTAYRFLIAGILLILLLFL--LRKPFALLSLKAILALLYLGLFGTALGYLL 70

Query: 91  YFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAI 148
           YF  L   S+S AS + +L P  T +++ ++  EK+ L       ++LG +  + G +
Sbjct: 71  YFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTL------KQLLGIVLILLGVL 122

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 22/129 (17%), Positives = 52/129 (40%), Gaps = 4/129 (3%)

Query: 192 CWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCF 251
            W+L+ +    +       L+ +A+   +A +                +L +   I    
Sbjct: 2   SWALYFVFSKKLLERIS-PLTFTAYRFLIAGILLILLLFLLRKPFALLSLKA---ILALL 57

Query: 252 FSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGV 311
           + G  G+ + + +  + +       +++   L  V   IL+ LLL E++    L+G + +
Sbjct: 58  YLGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVLI 117

Query: 312 ILGLYAVLW 320
           +LG+  +L 
Sbjct: 118 LLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 38.7 bits (91), Expect = 0.001
 Identities = 23/150 (15%), Positives = 60/150 (40%), Gaps = 15/150 (10%)

Query: 182 GCLFLFASACCWSLWLIL----QVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEP--- 234
           G +   A++  ++L LIL          +  + L L  ++  +A +      +F+E    
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 235 ----DPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTI 290
                    +L +S  +     SG +    +       + +  PL S++   +  V+V +
Sbjct: 61  GKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLS-AFGLLGRTSPLTSSVAGTVKRVVVIV 119

Query: 291 LAALLLHEEIYTGSLVGAIGVILGLYAVLW 320
           L+ ++  + +   + +  +G+ + +  V+ 
Sbjct: 120 LSVIIFGDPV---TFLNILGLAIAILGVVL 146

This family includes transporters with a specificity for triose phosphate. Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	375
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.96
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.95
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.94
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.92
COG2962	293	RarD Predicted permeases [General function predict	99.92
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.89
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.89
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.83
KOG2765	416	consensus Predicted membrane protein [Function unk	99.83
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.75
KOG2766	336	consensus Predicted membrane protein [Function unk	99.71
COG2510	140	Predicted membrane protein [Function unknown]	99.69
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.63
KOG1580	337	consensus UDP-galactose transporter related protei	99.61
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.61
COG2510	140	Predicted membrane protein [Function unknown]	99.57
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.57
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.53
KOG1581	327	consensus UDP-galactose transporter related protei	99.5
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.5
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.47
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.32
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.31
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.29
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.23
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.17
PRK13499	345	rhamnose-proton symporter; Provisional	99.15
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.14
PRK11272	292	putative DMT superfamily transporter inner membran	99.13
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.12
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.12
PRK15430	296	putative chloramphenical resistance permease RarD;	99.12
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.07
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.06
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.04
KOG1582	367	consensus UDP-galactose transporter related protei	99.04
PRK11689	295	aromatic amino acid exporter; Provisional	99.04
PLN00411	358	nodulin MtN21 family protein; Provisional	99.03
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.98
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.94
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.89
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.86
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.81
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	98.79
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.79
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.78
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.78
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.65
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.56
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.55
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.53
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.52
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.47
COG2962	293	RarD Predicted permeases [General function predict	98.43
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.31
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.25
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.21
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.11
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.89
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.8
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.8
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.78
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.74
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.71
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	97.68
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.66
COG2076	106	EmrE Membrane transporters of cations and cationic	97.62
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.6
PRK11431	105	multidrug efflux system protein; Provisional	97.52
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.49
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.44
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.43
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.36
KOG2765	416	consensus Predicted membrane protein [Function unk	97.33
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.31
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.29
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.28
COG2076	106	EmrE Membrane transporters of cations and cationic	97.28
PRK11431	105	multidrug efflux system protein; Provisional	97.28
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.25
PRK13499	345	rhamnose-proton symporter; Provisional	97.12
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.99
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.78
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.61
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.6
KOG1581	327	consensus UDP-galactose transporter related protei	96.54
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.16
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.01
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.95
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.69
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	95.62
KOG2922	335	consensus Uncharacterized conserved protein [Funct	95.61
KOG1580	337	consensus UDP-galactose transporter related protei	95.55
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	95.41
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	95.3
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	94.56
PRK02237	109	hypothetical protein; Provisional	93.09
KOG1443	349	consensus Predicted integral membrane protein [Fun	92.36
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	91.97
KOG4831	125	consensus Unnamed protein [Function unknown]	91.76
KOG2766	336	consensus Predicted membrane protein [Function unk	91.55
PRK02237	109	hypothetical protein; Provisional	91.39
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	91.19
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	90.72
COG1742	109	Uncharacterized conserved protein [Function unknow	89.7
KOG1582	367	consensus UDP-galactose transporter related protei	89.24
KOG3912	372	consensus Predicted integral membrane protein [Gen	88.23
PRK12650	962	putative monovalent cation/H+ antiporter subunit A	83.87
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	83.84
PRK06638	198	NADH:ubiquinone oxidoreductase subunit J; Provisio	83.03
COG1742	109	Uncharacterized conserved protein [Function unknow	82.2
PF15102	146	TMEM154: TMEM154 protein family	80.95

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=7.7e-39  Score=300.57  Aligned_cols=316  Identities=27%  Similarity=0.509  Sum_probs=254.6

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHH
Q 017191            4 LRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLG   83 (375)
Q Consensus         4 ~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   83 (375)
                      +|+.+.+..|++..+.++...++.|.+++.+++|..+.++|+.+++++++++.+.++++++.++.+++++..+.+.|+++
T Consensus         9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g   88 (358)
T PLN00411          9 RREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG   88 (358)
T ss_pred             hhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH
Confidence            46788999999999999999999999999999999999999999999999998766543221445688899999999999


Q ss_pred             HHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHh------hccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCc
Q 017191           84 VTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIV------GLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPK  157 (375)
Q Consensus        84 ~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~------~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~  157 (375)
                       ++.+.+++.|++|++++.++++.+++|+++.++++++      +|||++++      +++|++++++|++++...+++.
T Consensus        89 -~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~------~~~G~~l~~~Gv~ll~~~~g~~  161 (358)
T PLN00411         89 -SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVA------KVMGTILSLIGALVVIFYHGPR  161 (358)
T ss_pred             -HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHH------HHHHHHHHHHHHHHHHHccCcc
Confidence             7888899999999999999999999999999999999      58888888      9999999999999988644432


Q ss_pred             ccCcC-C-Cccc-cccc-cCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcC
Q 017191          158 LLNTE-F-LPEK-SFLF-RSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTE  233 (375)
Q Consensus       158 ~~~~~-~-~~~~-~~~~-~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  233 (375)
                      ....+ + ..+. .... .......+..|+++++.++++|++|++++|+..+++++....++++..++.+...++....+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~  241 (358)
T PLN00411        162 VFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVE  241 (358)
T ss_pred             cccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHc
Confidence            11000 0 0000 0000 00112334679999999999999999999999888865667778888888777777666654


Q ss_pred             CC-CcccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHH
Q 017191          234 PD-PEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVI  312 (375)
Q Consensus       234 ~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil  312 (375)
                      .. ...|.......+..+++.+++ +.++|.+|++++++.||++++++.+++|+++++++++++||++++.+++|+++|+
T Consensus       242 ~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl  320 (358)
T PLN00411        242 KNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILIT  320 (358)
T ss_pred             cCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence            32 233322222344557777764 6789999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhheeeccccccc
Q 017191          313 LGLYAVLWGKAKDHF  327 (375)
Q Consensus       313 ~g~~l~~~~~~~~~~  327 (375)
                      .|+++..+.|+|+.|
T Consensus       321 ~Gv~l~~~~~~~~~~  335 (358)
T PLN00411        321 LGFYAVMWGKANEEK  335 (358)
T ss_pred             HHHHHHHhhhhhhhh
Confidence            999999887666543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=3.5e-33  Score=257.97  Aligned_cols=280  Identities=14%  Similarity=0.145  Sum_probs=234.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHH
Q 017191            8 KPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTIN   87 (375)
Q Consensus         8 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   87 (375)
                      .-.+..++..++||.+++++|...+ +++|..++++|+.++.++++++...++++.    .+++++......|.++...+
T Consensus         8 ~~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~   82 (292)
T PRK11272          8 PLFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLRGHPL----PTLRQWLNAALIGLLLLAVG   82 (292)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHhCCCC----CcHHHHHHHHHHHHHHHHHH
Confidence            3356678899999999999998876 599999999999999999888865544321    35678888888998886778


Q ss_pred             HHHHHhhh-cccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCcc
Q 017191           88 QNTYFEGL-YLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPE  166 (375)
Q Consensus        88 ~~~~~~al-~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~  166 (375)
                      +.+++.+. ++++++.++++.++.|+++.+++.+ +|||++++      +++|++++++|+.++..  ++.         
T Consensus        83 ~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~--~~~---------  144 (292)
T PRK11272         83 NGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNS--GGN---------  144 (292)
T ss_pred             HHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhc--Ccc---------
Confidence            88999999 9999999999999999999999986 69999999      99999999999988762  110         


Q ss_pred             ccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchh
Q 017191          167 KSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLE  246 (375)
Q Consensus       167 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  246 (375)
                               .+....|++++++++++||.|.+..|+..++  ++...+.+++..+.+.+.+.....+.+..  ..++...
T Consensus       145 ---------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  211 (292)
T PRK11272        145 ---------LSGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLT--ALPTLSG  211 (292)
T ss_pred             ---------cccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCccc--ccCCHHH
Confidence                     1123479999999999999999999987643  34566778888888887777665432211  1124467


Q ss_pred             hHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccc
Q 017191          247 IFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKA  323 (375)
Q Consensus       247 ~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~  323 (375)
                      |..+++.+++++.+++.+|++++|+.+++.++.+.+++|+++.+++++++||+++..+++|+++++.|+++..+.++
T Consensus       212 ~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        212 FLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999876544

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=4.8e-32  Score=251.28  Aligned_cols=280  Identities=16%  Similarity=0.213  Sum_probs=220.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017191            9 PAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQ   88 (375)
Q Consensus         9 g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   88 (375)
                      ..++.++++++||.+++++|..+++ ++|..+.++|+.++.+.+.++.  ++++     .++   ......|++.....+
T Consensus         5 ~~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~--~~~~-----~~~---~~~~~~g~~~~~~~~   73 (299)
T PRK11453          5 DGVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFV--ARPK-----VPL---NLLLGYGLTISFGQF   73 (299)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHh--cCCC-----Cch---HHHHHHHHHHHHHHH
Confidence            3466889999999999999998865 9999999999999877665543  2211     122   234455665545666


Q ss_pred             HHHHhhhcc-cchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccc
Q 017191           89 NTYFEGLYL-ASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEK  167 (375)
Q Consensus        89 ~~~~~al~~-~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~  167 (375)
                      .+++.++++ .+++.++++.+++|+++.+++++++|||++++      ++++++++++|+.++..  +. .         
T Consensus        74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~--~~-~---------  135 (299)
T PRK11453         74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIE--DS-L---------  135 (299)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhcc--cc-C---------
Confidence            788899998 58899999999999999999999999999999      99999999999998872  11 0         


Q ss_pred             cccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCC--cHHHHHHHHHHHHHHHHHHHHHhcCCCC---cccccc
Q 017191          168 SFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYP--DHLSLSAWMCFLATLQSATFAIFTEPDP---EAWNLH  242 (375)
Q Consensus       168 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~  242 (375)
                            ++......|+.+++.++++|+.|.++.|+..++.+  +......+.+..+.+.........+++.   ..+...
T Consensus       136 ------~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (299)
T PRK11453        136 ------NGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTI  209 (299)
T ss_pred             ------CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccC
Confidence                  11122357999999999999999999999866543  2234455556555554444444333321   112223


Q ss_pred             cchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecc
Q 017191          243 SSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGK  322 (375)
Q Consensus       243 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~  322 (375)
                      +...|..++++++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|++++++|+++..+.+
T Consensus       210 ~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        210 DMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            45679999999999999999999999999999999999999999999999999999999999999999999999887766


Q ss_pred             c
Q 017191          323 A  323 (375)
Q Consensus       323 ~  323 (375)
                      +
T Consensus       290 ~  290 (299)
T PRK11453        290 R  290 (299)
T ss_pred             h
Confidence            5

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=100.00  E-value=4.3e-32  Score=251.12  Aligned_cols=282  Identities=10%  Similarity=0.068  Sum_probs=213.3

Q ss_pred             CCcccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhcccc-CC-CCCHHHHHHHHH
Q 017191            1 MSSLRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYK-SS-SMGLRSFSLIFF   78 (375)
Q Consensus         1 m~~~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~-~~-~~~~~~~~~~~~   78 (375)
                      |+|+++.+|++++++++++||..+++.|..  .+++|.++.++|+.++.+++.++...++++.. ++ ..+++++.. ..
T Consensus         1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~--~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~   77 (296)
T PRK15430          1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI--YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LA   77 (296)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HH
Confidence            788889999999999999999999999975  35999999999999999888877655432211 01 113444433 33


Q ss_pred             HHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcc
Q 017191           79 IALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKL  158 (375)
Q Consensus        79 ~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~  158 (375)
                      .+.++.+.++.++++|+++++++.++++.++.|+++.+++++++|||++++      +++|++++++|+.++..   +. 
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~---~~-  147 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLW---TF-  147 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHH---Hc-
Confidence            566665889999999999999999999999999999999999999999999      99999999999999872   20 


Q ss_pred             cCcCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 017191          159 LNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYP-DHLSLSAWMCFLATLQSATFAIFTEPDPE  237 (375)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  237 (375)
                                     .  +.    ..+.++++++||.|.+..|+..++.. +....+.+....+.....+.   ......
T Consensus       148 ---------------~--~~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  203 (296)
T PRK15430        148 ---------------G--SL----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSSTS  203 (296)
T ss_pred             ---------------C--Cc----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCCcc
Confidence                           0  01    14578899999999999998753321 22333344444443332211   111111


Q ss_pred             ccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhh
Q 017191          238 AWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYA  317 (375)
Q Consensus       238 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l  317 (375)
                      .+...+...+..+...|+ .+.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+.+
T Consensus       204 ~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v  282 (296)
T PRK15430        204 HMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAI  282 (296)
T ss_pred             cccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence            111111112333344454 6889999999999999999999999999999999999999999999999999999888777


Q ss_pred             eee
Q 017191          318 VLW  320 (375)
Q Consensus       318 ~~~  320 (375)
                      ...
T Consensus       283 ~~~  285 (296)
T PRK15430        283 FVM  285 (296)
T ss_pred             HHH
Confidence            654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=1.3e-31  Score=247.77  Aligned_cols=285  Identities=15%  Similarity=0.084  Sum_probs=215.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191            6 DYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT   85 (375)
Q Consensus         6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   85 (375)
                      +.+++++++++.++||.+++..|...++ ++|..+.++|+.++.+++.++.  ++++     .+++ .+...+.+.+...
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~--~~~~-----~~~~-~~~~~~~~~l~~~   72 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTV--GFPR-----LRQF-PKRYLLAGGLLFV   72 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHc--cccc-----cccc-cHHHHHHHhHHHH
Confidence            4567889999999999999999998865 9999999999999999888663  1111     1111 2223344555557


Q ss_pred             HHHHHHHhhhcc----cchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCc
Q 017191           86 INQNTYFEGLYL----ASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNT  161 (375)
Q Consensus        86 ~~~~~~~~al~~----~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~  161 (375)
                      .+..+++.++++    .+++.++++.+++|+++.+++++++|||++++      +++|++++++|++++... ++.....
T Consensus        73 ~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~~-~~~~~~~  145 (295)
T PRK11689         73 SYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLGG-DNGLSLA  145 (295)
T ss_pred             HHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheecC-Cccchhh
Confidence            788888877764    57788899999999999999999999999999      999999999999998731 1101000


Q ss_pred             CCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc
Q 017191          162 EFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNL  241 (375)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  241 (375)
                      +   .      ..+......|+.+++.+++|||+|+++.|+..++. ++.....   ..+.+.+.+.....+ +. .. .
T Consensus       146 ~---~------~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~~~---~~~~~~l~~~~~~~~-~~-~~-~  209 (295)
T PRK11689        146 E---L------INNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITLFF---ILTALALWIKYFLSP-QP-AM-V  209 (295)
T ss_pred             h---h------hhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhHHH---HHHHHHHHHHHHHhc-Cc-cc-c
Confidence            0   0      00111234699999999999999999999987776 4554422   223333333333322 21 11 1


Q ss_pred             ccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeec
Q 017191          242 HSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWG  321 (375)
Q Consensus       242 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~  321 (375)
                      .+...|..+++.++ +++++|.+|++++|+.++++++.+.+++|+++.+++++++||+++..+++|+++|+.|+++....
T Consensus       210 ~~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        210 FSLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             CCHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            23456777777775 79999999999999999999999999999999999999999999999999999999999887654


Q ss_pred             cc
Q 017191          322 KA  323 (375)
Q Consensus       322 ~~  323 (375)
                      ++
T Consensus       289 ~~  290 (295)
T PRK11689        289 TR  290 (295)
T ss_pred             Hh
Confidence            43

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=6.5e-31  Score=242.91  Aligned_cols=278  Identities=10%  Similarity=0.093  Sum_probs=224.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191            6 DYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT   85 (375)
Q Consensus         6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   85 (375)
                      ...++.+++++.++|+.++.+.|.+.++ ++|..+.++|++++.++++++...++     .+.++++++..+..|.+. +
T Consensus        10 ~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~~~-----~~~~~~~~~~~~~~g~~~-~   82 (293)
T PRK10532         10 VWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKPWR-----LRFAKEQRLPLLFYGVSL-G   82 (293)
T ss_pred             cchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhHHh-----ccCCHHHHHHHHHHHHHH-H
Confidence            5789999999999999999999999876 99999999999999988887643211     123678888888888876 7


Q ss_pred             HHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCc
Q 017191           86 INQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLP  165 (375)
Q Consensus        86 ~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~  165 (375)
                      ..+.++++++++++++.++++..+.|+++.+++.    |++.        +..++.++++|+.++.. .+.         
T Consensus        83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--------~~~~~~i~~~Gv~li~~-~~~---------  140 (293)
T PRK10532         83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--------DFVWVVLAVLGLWFLLP-LGQ---------  140 (293)
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--------HHHHHHHHHHHHheeee-cCC---------
Confidence            8888999999999999999999999999988763    4433        44556788999988762 111         


Q ss_pred             cccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccch
Q 017191          166 EKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSL  245 (375)
Q Consensus       166 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  245 (375)
                              +.......|+++.+.++++|+.|.+..|+..++. ++... .+....+.+++.++....+... .   .+..
T Consensus       141 --------~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~~~~-~---~~~~  206 (293)
T PRK10532        141 --------DVSHVDLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQAGEA-L---WHWS  206 (293)
T ss_pred             --------CcccCChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHccCcc-c---CCHH
Confidence                    1112235799999999999999999999988776 46655 4555666676666666443211 1   1233


Q ss_pred             hhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccccc
Q 017191          246 EIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKD  325 (375)
Q Consensus       246 ~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~~  325 (375)
                      .|..++++|++++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++|++|++...+.++||
T Consensus       207 ~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~  286 (293)
T PRK10532        207 ILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRRE  286 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            55667899999999999999999999999999999999999999999999999999999999999999999987766554


Q ss_pred             c
Q 017191          326 H  326 (375)
Q Consensus       326 ~  326 (375)
                      .
T Consensus       287 ~  287 (293)
T PRK10532        287 P  287 (293)
T ss_pred             C
Confidence            4

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=100.00  E-value=8.2e-31  Score=238.52  Aligned_cols=259  Identities=17%  Similarity=0.242  Sum_probs=221.3

Q ss_pred             HHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 017191           20 YAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLAS   99 (375)
Q Consensus        20 ~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~   99 (375)
                      ||.+++..|..++++.++....+.|++++.+++.++...+        .+++++.+....|.++..+++.++++|+++++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~   72 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR--------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLP   72 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc--------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            8999999999988778999999999999988887765332        14566778888888888999999999999999


Q ss_pred             hhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCCCCch
Q 017191          100 SSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENW  179 (375)
Q Consensus       100 ~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (375)
                      +++++++.++.|+++.+++.+++|||++++      +++|++++++|+.++..  ++                  +.+..
T Consensus        73 ~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~--~~------------------~~~~~  126 (260)
T TIGR00950        73 VGEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLS--DG------------------NLSIN  126 (260)
T ss_pred             hhhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhcc--CC------------------ccccc
Confidence            999999999999999999999999999999      99999999999999872  11                  11234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhCC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhh
Q 017191          180 LLGCLFLFASACCWSLWLILQVPVSASYP-DHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGS  258 (375)
Q Consensus       180 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  258 (375)
                      ..|+++++.++++|+.+.+..|+..++.+ ++.....+.+..+.+.+.+.....+++. .+   +...|..+++.+++++
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~  202 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLIGT  202 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHHHH
Confidence            67999999999999999999999887763 2345555778888888877776543322 11   4457778889999999


Q ss_pred             hHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhh
Q 017191          259 GVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLY  316 (375)
Q Consensus       259 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~  316 (375)
                      .++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++++.|+.
T Consensus       203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999999999999999863

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=6.1e-30  Score=237.73  Aligned_cols=286  Identities=15%  Similarity=0.089  Sum_probs=223.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017191           11 MAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNT   90 (375)
Q Consensus        11 l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   90 (375)
                      ++.++...+-....+..|.+++.-..|..++++|+.++.+.+.+.... +.+++ ++.++++++..+..|++. +++..+
T Consensus         5 ~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~g~~~-~~~~~~   81 (302)
T TIGR00817         5 LLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSS-GLPKR-LKISSALLKLLLPVAIVH-TIGHVT   81 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHh-CCCCC-CCCCHHHHHHHHHHHHHH-HHHHHH
Confidence            344455555555667899998653669999999999887776555221 12222 456889999999999998 899999


Q ss_pred             HHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCcccccc
Q 017191           91 YFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFL  170 (375)
Q Consensus        91 ~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~  170 (375)
                      .+.|++|++++.++++.++.|+++++++++++|||++++      ++++++++++|+++..   ..              
T Consensus        82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~---~~--------------  138 (302)
T TIGR00817        82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALAS---DT--------------  138 (302)
T ss_pred             HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhc---CC--------------
Confidence            999999999999999999999999999999999999999      9999999999998754   11              


Q ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhh--hCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcc---ccc----
Q 017191          171 FRSSGGENWLLGCLFLFASACCWSLWLILQVPVSA--SYPDHLSLSAWMCFLATLQSATFAIFTEPDPEA---WNL----  241 (375)
Q Consensus       171 ~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~----  241 (375)
                          +.+....|++++++++++|++|.+..|+..+  +. |+.....+++..+.+.+.|+....++....   +..    
T Consensus       139 ----~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~  213 (302)
T TIGR00817       139 ----ELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISG  213 (302)
T ss_pred             ----cccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcc
Confidence                1122357999999999999999999999887  66 689999999999999999888765432110   100    


Q ss_pred             -ccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheee
Q 017191          242 -HSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLW  320 (375)
Q Consensus       242 -~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~  320 (375)
                       .....+...++.+..+....+.++++++++.++++.+++.+++|++++++|++++||+++..+++|++++++|++++.+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       214 VNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             cCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence             0011121122223222333334566899999999999999999999999999999999999999999999999999987


Q ss_pred             ccccccc
Q 017191          321 GKAKDHF  327 (375)
Q Consensus       321 ~~~~~~~  327 (375)
                      .|+||++
T Consensus       294 ~k~~~~~  300 (302)
T TIGR00817       294 VKAQKPK  300 (302)
T ss_pred             HhccCcC
Confidence            7665543

specificities overlap.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.96  E-value=1.1e-27  Score=220.32  Aligned_cols=275  Identities=12%  Similarity=0.129  Sum_probs=202.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017191           10 AMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQN   89 (375)
Q Consensus        10 ~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   89 (375)
                      .++.++++++|+...+..|...++ -++  ..+++.....+++.++...+..+...+..+++ ++.....+.++...++.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPAT-FWLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchh-hHHHHHHHHHHHHHHHH
Confidence            567899999999999999966544 334  34777777777777776654212110222334 44444444444489999


Q ss_pred             HHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccc
Q 017191           90 TYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSF  169 (375)
Q Consensus        90 ~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~  169 (375)
                      ++++|+++.+++.++++.++.|+++.+++++++|||++++      +++|+.+++.|++++..   ++.           
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~---~~~-----------  138 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGL---SRF-----------  138 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhc---ccc-----------
Confidence            9999999999999999999999999999999999999999      99999999999998872   211           


Q ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCc---HHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchh
Q 017191          170 LFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPD---HLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLE  246 (375)
Q Consensus       170 ~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  246 (375)
                           . .....|+.++++++++|+.|.+..|+..++.++   ......+.+..+.+.........+..  .+. .....
T Consensus       139 -----~-~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~  209 (281)
T TIGR03340       139 -----A-QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGR--SMF-PYARQ  209 (281)
T ss_pred             -----c-ccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhcc--chh-hhHHH
Confidence                 1 112358888999999999999999876544421   11122233322212222222211111  111 12234


Q ss_pred             hHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhh
Q 017191          247 IFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYA  317 (375)
Q Consensus       247 ~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l  317 (375)
                      ++.+++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|+++
T Consensus       210 ~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       210 ILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            55667788889999999999999999999999999999999999999999999999999999999999876

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=1.1e-26  Score=213.81  Aligned_cols=298  Identities=13%  Similarity=0.101  Sum_probs=236.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191            7 YKPAMAMLALQFSYAVVALSTRAALLQGMN-PRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT   85 (375)
Q Consensus         7 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   85 (375)
                      ++..++.=..+++-..+...+....+.+.+ |....++.++.-.++..+....+++++...+.-+++|++.++.+++- .
T Consensus        12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D-v   90 (334)
T PF06027_consen   12 WIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD-V   90 (334)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH-H
Confidence            455566666777778888888888776676 88888888887777777766555443221233456778888889999 8


Q ss_pred             HHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCc
Q 017191           86 INQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLP  165 (375)
Q Consensus        86 ~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~  165 (375)
                      .++.+.+.|++|++.+.++++..+..+++++++++++|+|.++.      +++|+++++.|+.++...+.....      
T Consensus        91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~~~------  158 (334)
T PF06027_consen   91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLSGS------  158 (334)
T ss_pred             HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeecccccc------
Confidence            99999999999999999999999999999999999999999999      999999999999998853222111      


Q ss_pred             cccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCC-Ccccccccc
Q 017191          166 EKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPD-PEAWNLHSS  244 (375)
Q Consensus       166 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~  244 (375)
                            ++.+.++..+|+++++.++++||+++++.++..++. +......+..+++.++..+.....|.+ .....+. .
T Consensus       159 ------~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~-~  230 (334)
T PF06027_consen  159 ------DSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERSGIESIHWT-S  230 (334)
T ss_pred             ------cCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCC-h
Confidence                  012345678999999999999999999999999988 588888999999999988887766543 2222221 2


Q ss_pred             hhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecccc
Q 017191          245 LEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAK  324 (375)
Q Consensus       245 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~  324 (375)
                      ..+..++. ..++...-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|++|.+++...+++
T Consensus       231 ~~~~~~v~-~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~  309 (334)
T PF06027_consen  231 QVIGLLVG-YALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP  309 (334)
T ss_pred             hhHHHHHH-HHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence            22322222 33366777888889999999999999999999999999999999999999999999999999999887665


Q ss_pred             cc
Q 017191          325 DH  326 (375)
Q Consensus       325 ~~  326 (375)
                      .+
T Consensus       310 ~~  311 (334)
T PF06027_consen  310 EE  311 (334)
T ss_pred             cc
Confidence            44

Some of the sequences in this family are annotated as putative membrane proteins.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=1.2e-26  Score=219.00  Aligned_cols=284  Identities=16%  Similarity=0.131  Sum_probs=225.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccccCCCC--CHHHHHHHHHHHHH
Q 017191            6 DYKPAMAMLALQFSYAVVALSTRAALLQGMN-PRVFVVYRQAIATLFMAPMAYLSSRKYKSSSM--GLRSFSLIFFIALL   82 (375)
Q Consensus         6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~   82 (375)
                      +.+..++.+....+-.......|..++. ++ |..++++|+++++++....+....+++  ++.  .+++++.++..|++
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~llp~gl~  123 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATGFRKI--PRIKSLKLFLKNFLPQGLC  123 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhCCCCC--CCCCCHHHHHHHHHHHHHH
Confidence            4566677777777778888999999876 99 999999999999887655543322222  333  34578899999999


Q ss_pred             HHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcC
Q 017191           83 GVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTE  162 (375)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~  162 (375)
                      +. ..+...+.|+++++++.++++..+.|+++++++++++|||++++      +++++++++.|+++...   .      
T Consensus       124 ~~-~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~---~------  187 (350)
T PTZ00343        124 HL-FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASV---K------  187 (350)
T ss_pred             HH-HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheec---c------
Confidence            94 44666779999999999999999999999999999999999999      99999999999999872   1      


Q ss_pred             CCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCC------cHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 017191          163 FLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYP------DHLSLSAWMCFLATLQSATFAIFTEPDP  236 (375)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~  236 (375)
                                  +.+....|++++++++++|+++++..|+..++.+      ++.....+....+.++++|+....|...
T Consensus       188 ------------~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~  255 (350)
T PTZ00343        188 ------------ELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKK  255 (350)
T ss_pred             ------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence                        1122467999999999999999999999876541      3555666668889988888887554321


Q ss_pred             --cccc----cccchhhHHHHhhhhhhhhHhHHHHHH----HhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhh
Q 017191          237 --EAWN----LHSSLEIFCCFFSGAIGSGVSFCVQAW----CISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLV  306 (375)
Q Consensus       237 --~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~----a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~i  306 (375)
                        ..+.    ......+..+++ .++.+++++++|+.    +++++++...++..+++|++++++|++++||+++..+++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~i  334 (350)
T PTZ00343        256 WVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYL  334 (350)
T ss_pred             HHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHH
Confidence              1110    001112233444 34568899999985    999999999999999999999999999999999999999


Q ss_pred             hHHHHHhhhhheeec
Q 017191          307 GAIGVILGLYAVLWG  321 (375)
Q Consensus       307 G~~lil~g~~l~~~~  321 (375)
                      |++++++|++++.+-
T Consensus       335 G~~lii~Gv~lYs~~  349 (350)
T PTZ00343        335 GMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHhhc
Confidence            999999999998754

>TIGR00688 rarD rarD protein

Probab=99.95  E-value=1.5e-25  Score=203.29  Aligned_cols=249  Identities=13%  Similarity=0.072  Sum_probs=184.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccc----cCCCCCHHH-HHHHHHHHHH
Q 017191            8 KPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKY----KSSSMGLRS-FSLIFFIALL   82 (375)
Q Consensus         8 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~----~~~~~~~~~-~~~~~~~g~~   82 (375)
                      +|++++++++++||.++++.|. .. +++|.+++++|++++.+++.++...+++++    +.++.++++ +......|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            5889999999999999999998 44 499999999999999988877664443221    101122333 4456677777


Q ss_pred             HHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcC
Q 017191           83 GVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTE  162 (375)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~  162 (375)
                      . +.++.++++|++++++++++++.++.|+++++++++++|||++++      ++++++++++|++++..   +.     
T Consensus        80 ~-~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~---~~-----  144 (256)
T TIGR00688        80 I-GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIV---LK-----  144 (256)
T ss_pred             H-HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHH---Hc-----
Confidence            5 899999999999999999999999999999999999999999999      99999999999998863   10     


Q ss_pred             CCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccc
Q 017191          163 FLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLH  242 (375)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  242 (375)
                                  ++. .    .+++.++++|+.|.+..|+..++  +.......... ......+..... ........+
T Consensus       145 ------------~~~-~----~~~l~aa~~~a~~~i~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~  203 (256)
T TIGR00688       145 ------------GSL-P----WEALVLAFSFTAYGLIRKALKNT--DLAGFCLETLS-LMPVAIYYLLQT-DFATVQQTN  203 (256)
T ss_pred             ------------CCc-h----HHHHHHHHHHHHHHHHHhhcCCC--CcchHHHHHHH-HHHHHHHHHHHh-ccCcccccC
Confidence                        000 1    35688999999999999987543  23222221111 111111111111 111101111


Q ss_pred             cchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHH
Q 017191          243 SSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALL  295 (375)
Q Consensus       243 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~  295 (375)
                      +...|..+++.|++ +.++|.++++++|+.++++++.+.|++|+++.+++++.
T Consensus       204 ~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       204 PFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             chhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            22367788888875 88999999999999999999999999999999999864

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.94  E-value=8.7e-24  Score=194.96  Aligned_cols=284  Identities=24%  Similarity=0.314  Sum_probs=219.9

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHH
Q 017191            4 LRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLG   83 (375)
Q Consensus         4 ~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   83 (375)
                      ++...+....++..+.|+......|...+...++....+.|...+.++..+.....+....   ...+.++...+.+.+.
T Consensus         3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   79 (292)
T COG0697           3 RALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLR---PALRPWLLLLLLALLG   79 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhccccc---ccccchHHHHHHHHHH
Confidence            4456778888999999999999999886543667777777999888874434322211111   1222255666666677


Q ss_pred             HHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHH-HhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcC
Q 017191           84 VTINQNTYFEGLYLASSSMASAMGNLIPAITFVMAS-IVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTE  162 (375)
Q Consensus        84 ~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~-l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~  162 (375)
                      ...++.+++.++++++++.++++.++.|+++.+++. +++|||++++      +++++.+++.|++++..   ++..   
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~---~~~~---  147 (292)
T COG0697          80 LALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILL---GGGG---  147 (292)
T ss_pred             HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheec---CCCc---
Confidence            699999999999999999999999999999999997 7679999999      99999999999999983   2111   


Q ss_pred             CCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHH-HHHHHHHHHHHHHHHhcCCCCccccc
Q 017191          163 FLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSA-WMCFLATLQSATFAIFTEPDPEAWNL  241 (375)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~  241 (375)
                                 ...+ ...|+.+.++++++|+++.+..|+.. +. ++..... +.+........+... ...+    ..
T Consensus       148 -----------~~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~  208 (292)
T COG0697         148 -----------GGIL-SLLGLLLALAAALLWALYTALVKRLS-RL-GPVTLALLLQLLLALLLLLLFFL-SGFG----AP  208 (292)
T ss_pred             -----------chhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ChHHHHHHHHHHHHHHHHHHHHh-cccc----cc
Confidence                       0111 56899999999999999999999887 44 3555555 343322222222222 1111    12


Q ss_pred             ccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeec
Q 017191          242 HSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWG  321 (375)
Q Consensus       242 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~  321 (375)
                      .....+..+.+.|++++++++.++.+++++.++...+.+.+++|+++.++++++++|+++..+++|+++++.|+.+...+
T Consensus       209 ~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         209 ILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            24457888899999888899999999999999999999999999999999999999999999999999999999998776

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.92  E-value=8.2e-23  Score=174.52  Aligned_cols=275  Identities=13%  Similarity=0.093  Sum_probs=230.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017191            9 PAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQ   88 (375)
Q Consensus         9 g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   88 (375)
                      +++.++.+...--....+.|..+.. ++|..++.+|..++.++++++..  .++   .+.+++++..+...|+.. ..-|
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~R--Pwr---~r~~~~~~~~~~~yGvsL-g~MN   85 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFR--PWR---RRLSKPQRLALLAYGVSL-GGMN   85 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhh--HHH---hccChhhhHHHHHHHHHH-HHHH
Confidence            5788888888888888899988865 99999999999999999988753  222   346889999999999999 8889


Q ss_pred             HHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCcccc
Q 017191           89 NTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKS  168 (375)
Q Consensus        89 ~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~  168 (375)
                      .+||.+++.+|.+.+..+.++.|+.+.+++.-      +.+      +.+.+.+++.|+.++.. .++            
T Consensus        86 l~FY~si~riPlGiAVAiEF~GPL~vA~~~sR------r~~------d~vwvaLAvlGi~lL~p-~~~------------  140 (292)
T COG5006          86 LLFYLSIERIPLGIAVAIEFTGPLAVALLSSR------RLR------DFVWVALAVLGIWLLLP-LGQ------------  140 (292)
T ss_pred             HHHHHHHHhccchhhhhhhhccHHHHHHHhcc------chh------hHHHHHHHHHHHHhhee-ccC------------
Confidence            99999999999999999999999998887542      445      77788899999998872 122            


Q ss_pred             ccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhH
Q 017191          169 FLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIF  248 (375)
Q Consensus       169 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  248 (375)
                           +..+.+..|..+++.++.||+.|.+..+|..+.. +..+-....+..++++..|+.....+.    ...++..+.
T Consensus       141 -----~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~-~g~~g~a~gm~vAaviv~Pig~~~ag~----~l~~p~ll~  210 (292)
T COG5006         141 -----SVWSLDPVGVALALGAGACWALYIVLGQRAGRAE-HGTAGVAVGMLVAALIVLPIGAAQAGP----ALFSPSLLP  210 (292)
T ss_pred             -----CcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccC-CCchHHHHHHHHHHHHHhhhhhhhcch----hhcChHHHH
Confidence                 3345568999999999999999999999988665 577788888999999999988854322    112344566


Q ss_pred             HHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccccc
Q 017191          249 CCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKD  325 (375)
Q Consensus       249 ~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~~  325 (375)
                      .-+..+++++.+.|.+-..++++.+....+.+..++|.++.+.|++++||++|+.||.|+++|+.+..-..+..+|+
T Consensus       211 laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~  287 (292)
T COG5006         211 LALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP  287 (292)
T ss_pred             HHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence            66888999999999999999999999999999999999999999999999999999999999999987666654443

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.92  E-value=1.6e-22  Score=177.46  Aligned_cols=281  Identities=13%  Similarity=0.094  Sum_probs=223.4

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhcccc--CCCCCHHHHHHHHHHHH
Q 017191            4 LRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYK--SSSMGLRSFSLIFFIAL   81 (375)
Q Consensus         4 ~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~   81 (375)
                      ++..+|+++.+.+.++||..+...|..  +..++.++...|..-+.+++..+....++++.  .-..++|.+....+.++
T Consensus         3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll--~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~   80 (293)
T COG2962           3 KDSRKGILLALLAYLLWGLLPLYFKLL--EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTAL   80 (293)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHH
Confidence            556789999999999999999999976  45999999999999999988887766554433  11235566777777777


Q ss_pred             HHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCc
Q 017191           82 LGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNT  161 (375)
Q Consensus        82 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~  161 (375)
                      .. ..++..|.+|......-++++=++.+|++.++++.+|+|||+++.      |++++.++.+||.......|.     
T Consensus        81 li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g~-----  148 (293)
T COG2962          81 LI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLGS-----  148 (293)
T ss_pred             HH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcCC-----
Confidence            77 899999999999999999999999999999999999999999999      999999999999999863222     


Q ss_pred             CCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc
Q 017191          162 EFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNL  241 (375)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  241 (375)
                                      ..    ..++.-++.|++|...-|+.  +. |+.+-...-+..-........+..+...+....
T Consensus       149 ----------------lp----wval~la~sf~~Ygl~RK~~--~v-~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~  205 (293)
T COG2962         149 ----------------LP----WVALALALSFGLYGLLRKKL--KV-DALTGLTLETLLLLPVALIYLLFLADSGQFLQQ  205 (293)
T ss_pred             ----------------Cc----HHHHHHHHHHHHHHHHHHhc--CC-chHHhHHHHHHHHhHHHHHHHHHHhcCchhhhc
Confidence                            11    23455688999999886654  33 344444444444444444444433322211222


Q ss_pred             ccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeec
Q 017191          242 HSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWG  321 (375)
Q Consensus       242 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~  321 (375)
                      .+...+..+...|. .|.++..++..+.|+++-+..+.++|.+|..-.+++++++||+++..+++..++|-+|++++...
T Consensus       206 ~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d  284 (293)
T COG2962         206 NANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID  284 (293)
T ss_pred             CCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            34556667777777 69999999999999999999999999999999999999999999999999999999999998764


Q ss_pred             c
Q 017191          322 K  322 (375)
Q Consensus       322 ~  322 (375)
                      .
T Consensus       285 ~  285 (293)
T COG2962         285 G  285 (293)
T ss_pred             H
Confidence            3

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.89  E-value=2.7e-21  Score=178.00  Aligned_cols=275  Identities=15%  Similarity=0.093  Sum_probs=208.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017191            9 PAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQ   88 (375)
Q Consensus         9 g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   88 (375)
                      ++++.++++++||...+..|...  +.++.++.  |..++.+++..+....+.++   ...++.+..-++.|++. ..++
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~~---~~~~~~~~~g~l~G~~w-~ig~   73 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLPE---FWALSIFLVGLLSGAFW-ALGQ   73 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCCc---ccccHHHHHHHHHHHHH-Hhhh
Confidence            47889999999999999999763  57777765  77777777766655543211   11245555566666665 8999


Q ss_pred             HHHHhhhcccchhhHhhhhh-hhHHHHHHHHHHhhccccCCCccchhhh----hhhHHHHhhhHhHHhhhcCCcccCcCC
Q 017191           89 NTYFEGLYLASSSMASAMGN-LIPAITFVMASIVGLEKIDLGSVRSVAK----ILGTIFCVGGAISMALLRGPKLLNTEF  163 (375)
Q Consensus        89 ~~~~~al~~~~~~~a~~l~~-~~pi~~~ll~~l~~~e~~~~~~~~~~~~----~~g~~l~~~Gv~l~~~~~~~~~~~~~~  163 (375)
                      .+|+.++++.+.+.+..+.+ +.+++..+++.+++|||.+++      +    ++|++++++|++++...++++..    
T Consensus        74 ~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~~----  143 (290)
T TIGR00776        74 INQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSAG----  143 (290)
T ss_pred             hhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEeccccccc----
Confidence            99999999999999999987 999999999999999999999      8    99999999998888632111000    


Q ss_pred             CccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHH---HHHHHHHHHHHHhcCCCCcccc
Q 017191          164 LPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMC---FLATLQSATFAIFTEPDPEAWN  240 (375)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~  240 (375)
                               +.+..+...|..++++++++|+.|.+..|+.  ++ ++.+..+.+.   ..++.+......   .. ..+ 
T Consensus       144 ---------~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~~---~~-~~~-  206 (290)
T TIGR00776       144 ---------IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFNLGHI---LA-KPL-  206 (290)
T ss_pred             ---------cccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHHHHHh---cc-cch-
Confidence                     0000234679999999999999999999976  35 5777744443   334333332221   00 111 


Q ss_pred             cccchhhHHHHhhhhhhhhHhHHHHHHHhc-cCCcchhhhhhhHHHHHHHHHHHHHhcccccchhh----hhHHHHHhhh
Q 017191          241 LHSSLEIFCCFFSGAIGSGVSFCVQAWCIS-KRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSL----VGAIGVILGL  315 (375)
Q Consensus       241 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~-~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~----iG~~lil~g~  315 (375)
                       .+...+..++ .|++ .++++.+|..+.+ +.+++.++.+.+.+|+.+.+++++++||+.+..++    +|+++++.|+
T Consensus       207 -~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~  283 (290)
T TIGR00776       207 -KKYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAA  283 (290)
T ss_pred             -HHHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHH
Confidence             1223344444 7886 7999999999999 99999999999999999999999999999999999    9999999999


Q ss_pred             hheeec
Q 017191          316 YAVLWG  321 (375)
Q Consensus       316 ~l~~~~  321 (375)
                      .+....
T Consensus       284 ~l~~~~  289 (290)
T TIGR00776       284 NILGIG  289 (290)
T ss_pred             HHHhcc
Confidence            886543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.89  E-value=1.2e-24  Score=186.75  Aligned_cols=294  Identities=15%  Similarity=0.060  Sum_probs=221.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191            6 DYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT   85 (375)
Q Consensus         6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   85 (375)
                      ..+|.++..++.+.-..+.+..| .+ + .+|.+..-.|++..+++-.|....++....   .+....+++++.|..+ .
T Consensus        36 p~~gl~l~~vs~ff~~~~vv~t~-~~-e-~~p~e~a~~r~l~~mlit~pcliy~~~~v~---gp~g~R~~LiLRg~mG-~  108 (346)
T KOG4510|consen   36 PNLGLLLLTVSYFFNSCMVVSTK-VL-E-NDPMELASFRLLVRMLITYPCLIYYMQPVI---GPEGKRKWLILRGFMG-F  108 (346)
T ss_pred             CccCceehhhHHHHhhHHHhhhh-hh-c-cChhHhhhhhhhhehhhhheEEEEEeeeee---cCCCcEEEEEeehhhh-h
Confidence            45677777777555444444444 43 3 799999999988777777766554444321   2333455788899999 7


Q ss_pred             HHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCc
Q 017191           86 INQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLP  165 (375)
Q Consensus        86 ~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~  165 (375)
                      .+....|||++|.+.++++++..+.|+++.+++++++||+.++.      +.++..+.+.|+++++  +.|.+.++..+.
T Consensus       109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIv--RPpFlFG~~t~g  180 (346)
T KOG4510|consen  109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIV--RPPFLFGDTTEG  180 (346)
T ss_pred             hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEe--cCCcccCCCccc
Confidence            77788889999999999999999999999999999999999999      9999999999999998  344433221111


Q ss_pred             cccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccc-cc
Q 017191          166 EKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLH-SS  244 (375)
Q Consensus       166 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~  244 (375)
                      +     +++..+....|.+.++.+.++.|-..++.|+..++.+ ..-...+..+.+.+......... +   .+.++ ..
T Consensus       181 ~-----~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h-~~msvsyf~~i~lV~s~I~~~~i-g---~~~lP~cg  250 (346)
T KOG4510|consen  181 E-----DSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAH-AIMSVSYFSLITLVVSLIGCASI-G---AVQLPHCG  250 (346)
T ss_pred             c-----ccccccccCCchHHHHHhHhhhhhHHHHHHHhhcccc-EEEEehHHHHHHHHHHHHHHhhc-c---ceecCccc
Confidence            1     1122344567888889999999999999999988873 33333444444444443333322 1   33333 45


Q ss_pred             hhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecccc
Q 017191          245 LEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAK  324 (375)
Q Consensus       245 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~  324 (375)
                      .+|+.++.+|+ .+.+++.+...++++..+...+++.+++.+++.+++++++|+.|+++.|+|+++++.+.+....+|..
T Consensus       251 kdr~l~~~lGv-fgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa  329 (346)
T KOG4510|consen  251 KDRWLFVNLGV-FGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWA  329 (346)
T ss_pred             cceEEEEEehh-hhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHHh
Confidence            67788888898 68899999999999999999999999999999999999999999999999999999998887766554


Q ss_pred             c
Q 017191          325 D  325 (375)
Q Consensus       325 ~  325 (375)
                      +
T Consensus       330 ~  330 (346)
T KOG4510|consen  330 G  330 (346)
T ss_pred             c
Confidence            4

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.83  E-value=2.1e-18  Score=160.21  Aligned_cols=279  Identities=11%  Similarity=0.083  Sum_probs=216.1

Q ss_pred             HHHHHHHHH-CCCC--hHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccch
Q 017191           24 ALSTRAALL-QGMN--PRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASS  100 (375)
Q Consensus        24 ~~~~k~~~~-~~~~--p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~  100 (375)
                      .++...... ....  |..+++..++...++..+.....+++    +.++..++..+..+++. .++..+-+.|++|++.
T Consensus        16 g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~   90 (303)
T PF08449_consen   16 GILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP----KSRKIPLKKYAILSFLF-FLASVLSNAALKYISY   90 (303)
T ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc----CCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCCh
Confidence            344444443 2233  78888998888887766665444422    22445566777788888 8899999999999999


Q ss_pred             hhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCCCCchH
Q 017191          101 SMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWL  180 (375)
Q Consensus       101 ~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (375)
                      +.-.++....|+++++++.+++|+|.+++      ++.++++..+|+++....+..+..+.           ......+.
T Consensus        91 p~~~~~ks~~~i~vmi~~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~~~~-----------~~~~~~~~  153 (303)
T PF08449_consen   91 PTQIVFKSSKPIPVMILGVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSSSSS-----------NSSSFSSA  153 (303)
T ss_pred             HHHHHHhhhHHHHHHHHHHHhcCccccHH------HHHHHHHHHhhHheeeeccccccccc-----------ccccccch
Confidence            99999999999999999999999999999      99999999999999986332221110           11222334


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhCC-cHHHHHHHHHHHHHHHHHHHHHh--cCCCCccc--ccccchhhHHHHhhhh
Q 017191          181 LGCLFLFASACCWSLWLILQVPVSASYP-DHLSLSAWMCFLATLQSATFAIF--TEPDPEAW--NLHSSLEIFCCFFSGA  255 (375)
Q Consensus       181 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~g~  255 (375)
                      .|+++.+++.++.|+..+.+++..++++ ++....++...++.+...+....  .++....+  ....+..+..++...+
T Consensus       154 ~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~  233 (303)
T PF08449_consen  154 LGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL  233 (303)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH
Confidence            5999999999999999999999987665 67888999999988888777776  22211111  1122334555555555


Q ss_pred             hhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccccc
Q 017191          256 IGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKD  325 (375)
Q Consensus       256 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~~  325 (375)
                       ++.++.....+..++.++...+++..++-+++++++++++++++++.+|+|+++++.|..+..+.|+|+
T Consensus       234 -~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  234 -TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             -HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence             677888888899999999999999999999999999999999999999999999999999999888765

; GO: 0055085 transmembrane transport

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.83  E-value=2e-19  Score=162.16  Aligned_cols=302  Identities=16%  Similarity=0.201  Sum_probs=224.6

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHCCC--ChHHHHHHHHHHHHHHHHHHH-------HHhhcccc-C---------
Q 017191            5 RDYKPAMAMLALQFSYAVVALSTRAALLQGM--NPRVFVVYRQAIATLFMAPMA-------YLSSRKYK-S---------   65 (375)
Q Consensus         5 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~--~p~~~~~~r~~~~~~~l~~~~-------~~~~~~~~-~---------   65 (375)
                      |...|++++++..++|-.+.-+.+..++.+-  .|+..++.....-.+.+.++.       ...+|.++ .         
T Consensus        11 r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~d~   90 (416)
T KOG2765|consen   11 RWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEADA   90 (416)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhhhh
Confidence            3678999999999999999999999987533  377776654433333333211       11111000 0         


Q ss_pred             -------------------------------------------------CCCCH------------HHHHHHHHHHHHHH
Q 017191           66 -------------------------------------------------SSMGL------------RSFSLIFFIALLGV   84 (375)
Q Consensus        66 -------------------------------------------------~~~~~------------~~~~~~~~~g~~~~   84 (375)
                                                                       +...+            +..+..+....+. 
T Consensus        91 e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~lW-  169 (416)
T KOG2765|consen   91 EGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPLW-  169 (416)
T ss_pred             hccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHHH-
Confidence                                                             00111            2233444455555 


Q ss_pred             HHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCC
Q 017191           85 TINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFL  164 (375)
Q Consensus        85 ~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~  164 (375)
                      ++++.+++.|+.+++++..+++..+..+|+..++.+|.+||+++.      +++++.+++.|++++...+... .     
T Consensus       170 F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~s~~-~-----  237 (416)
T KOG2765|consen  170 FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGDSKQ-N-----  237 (416)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEeccccc-c-----
Confidence            899999999999999999999999999999999999999999999      9999999999999998632221 1     


Q ss_pred             ccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHH---HHHHHHHHHHHHHHHhcC-CCCcccc
Q 017191          165 PEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSA---WMCFLATLQSATFAIFTE-PDPEAWN  240 (375)
Q Consensus       165 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~-~~~~~~~  240 (375)
                             ++........|+++++++++.||+|.++.|+...++.+.+.+..   +..++..+++.|..++.. -....++
T Consensus       238 -------~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~  310 (416)
T KOG2765|consen  238 -------SDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFE  310 (416)
T ss_pred             -------ccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCccc
Confidence                   01345566899999999999999999999998766632333332   333333444443333211 1223455


Q ss_pred             cccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheee
Q 017191          241 LHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLW  320 (375)
Q Consensus       241 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~  320 (375)
                      .+.......+++.++++++++-++|.+|.-.++|..+++-+.++.+.+++.+.++-|.++++.+++|...|++|.+.++.
T Consensus       311 lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~  390 (416)
T KOG2765|consen  311 LPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNI  390 (416)
T ss_pred             CCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheec
Confidence            56666777788889999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             cccccc
Q 017191          321 GKAKDH  326 (375)
Q Consensus       321 ~~~~~~  326 (375)
                      ..+...
T Consensus       391 ~~~~~~  396 (416)
T KOG2765|consen  391 SSENSK  396 (416)
T ss_pred             cccccc
Confidence            765443

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.75  E-value=4.9e-18  Score=154.73  Aligned_cols=285  Identities=12%  Similarity=0.066  Sum_probs=223.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHH--CCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017191           13 MLALQFSYAVVALSTRAALL--QGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNT   90 (375)
Q Consensus        13 ~l~~~~~~~~~~~~~k~~~~--~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   90 (375)
                      .....++--......|..++  ..--|..++..+...+.+.+.....++..+.. +..++..+..++.+|++. +++..+
T Consensus        22 ~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~-~~~~~~~~~~llpl~~~~-~~~~v~   99 (316)
T KOG1441|consen   22 FAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPS-KISSKLPLRTLLPLGLVF-CISHVL   99 (316)
T ss_pred             HHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCC-ccccccchHHHHHHHHHH-HHHHHh
Confidence            33344444445567788887  33348888888888877777776655555443 333556788999999999 999999


Q ss_pred             HHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCcccccc
Q 017191           91 YFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFL  170 (375)
Q Consensus        91 ~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~  170 (375)
                      -+.++.+.+++.++.+..++|++++++++++.+|+.++.      .+..++....|+.+...                  
T Consensus       100 ~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~------------------  155 (316)
T KOG1441|consen  100 GNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASV------------------  155 (316)
T ss_pred             cchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeee------------------
Confidence            999999999999999999999999999999999999999      99999999999999883                  


Q ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhh--hCC-cHHHHHHHHHHHHHHHHH-HHHHhcCCCCc-c-cccccc
Q 017191          171 FRSSGGENWLLGCLFLFASACCWSLWLILQVPVSA--SYP-DHLSLSAWMCFLATLQSA-TFAIFTEPDPE-A-WNLHSS  244 (375)
Q Consensus       171 ~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~--~~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~-~-~~~~~~  244 (375)
                         .+.+.+..|...++++.+..+..+++.|+..+  +++ |++++..++.-.+.+.++ |+....+++.. . ......
T Consensus       156 ---~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~  232 (316)
T KOG1441|consen  156 ---TELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWF  232 (316)
T ss_pred             ---ccccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccc
Confidence               23345578999999999999999999999984  222 799999999999999888 77776655432 0 010111


Q ss_pred             hhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecccc
Q 017191          245 LEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAK  324 (375)
Q Consensus       245 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~  324 (375)
                      ......++.. ++..+-+...+..+.+++|...++.+...-++.++.|+++|+++.++.+..|+++.++|++++.+.|.+
T Consensus       233 ~~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~  311 (316)
T KOG1441|consen  233 VTFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLK  311 (316)
T ss_pred             hhhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhh
Confidence            1222333333 345555566678899999999999999999999999999999999999999999999999999988876


Q ss_pred             ccc
Q 017191          325 DHF  327 (375)
Q Consensus       325 ~~~  327 (375)
                      +++
T Consensus       312 ~~~  314 (316)
T KOG1441|consen  312 EKK  314 (316)
T ss_pred             hhc
Confidence            553

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.71  E-value=6.9e-18  Score=144.46  Aligned_cols=266  Identities=13%  Similarity=0.147  Sum_probs=209.6

Q ss_pred             HHHHHHHHHHHCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccch
Q 017191           22 VVALSTRAALLQGMN-PRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASS  100 (375)
Q Consensus        22 ~~~~~~k~~~~~~~~-p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~  100 (375)
                      .....+......++| |...+|+.+..-+++..++..+|+. .     -...|...++++++. +=++.+...|.||++.
T Consensus        32 ~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~-~-----~~~~~~hYilla~~D-VEaNy~vV~AyQyTsm  104 (336)
T KOG2766|consen   32 STAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRK-Y-----IKAKWRHYILLAFVD-VEANYFVVKAYQYTSM  104 (336)
T ss_pred             cchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhH-H-----HHHHHHHhhheeEEe-ecccEEEeeehhhcch
Confidence            333344444444454 8888999999999999988876663 2     224466688888888 7788888899999999


Q ss_pred             hhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCCCCchH
Q 017191          101 SMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWL  180 (375)
Q Consensus       101 ~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (375)
                      +.++++..-..+.+.+++|+|+|.|.++.      ++.|+.+|++|+.+++..+-.. .            ++.++++..
T Consensus       105 tSi~lLDcwaip~v~~lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~sDV~a-g------------d~aggsnp~  165 (336)
T KOG2766|consen  105 TSIMLLDCWAIPCVLVLSWFFLKTRYRLM------KISGVVICIVGVVMVVFSDVHA-G------------DRAGGSNPV  165 (336)
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHHHHHhhh------eeeeEEeEecceEEEEEeeecc-c------------cccCCCCCc
Confidence            99999999888899999999999999999      9999999999999998533222 1            135567788


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhH
Q 017191          181 LGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGV  260 (375)
Q Consensus       181 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  260 (375)
                      +|+++.++++-+||+.++..+.+.++. |...++....++|+++...-......+.....+.  ......+. ..++.++
T Consensus       166 ~GD~lvi~GATlYaVSNv~EEflvkn~-d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w~--~~i~~yl~-f~L~MFl  241 (336)
T KOG2766|consen  166 KGDFLVIAGATLYAVSNVSEEFLVKNA-DRVELMGFLGLFGAIISAIQFIFERHHVSTLHWD--SAIFLYLR-FALTMFL  241 (336)
T ss_pred             cCcEEEEecceeeeeccccHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHhhhccceeeEeeh--HHHHHHHH-HHHHHHH
Confidence            999999999999999999999999998 6999999999999999888844333332222211  22222222 3346667


Q ss_pred             hHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhee
Q 017191          261 SFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVL  319 (375)
Q Consensus       261 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~  319 (375)
                      -|.+.-..+|.-+++..++-..++-.++.++  ..||-+.+|...+..+.+..|.+++.
T Consensus       242 lYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs  298 (336)
T KOG2766|consen  242 LYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYS  298 (336)
T ss_pred             HHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEee
Confidence            7777788899999999999999999999998  56788899999999999999998873

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.69  E-value=2.2e-16  Score=121.30  Aligned_cols=135  Identities=16%  Similarity=0.272  Sum_probs=122.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017191            9 PAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQ   88 (375)
Q Consensus         9 g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   88 (375)
                      ..++.++++++||...++.|..++ ++||...++.|..+..+++..+++..++.......++|.|..+.+.|+.+ ++++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-glsw   81 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLSW   81 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHHH
Confidence            567899999999999999999984 59999999999999999888888777665442346889999999999887 9999


Q ss_pred             HHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHh
Q 017191           89 NTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMA  151 (375)
Q Consensus        89 ~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~  151 (375)
                      .+||+|++...++.+..+..+.|+++++++++|+|||++..      +|+|+++..+|++++.
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs  138 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence            99999999999999999999999999999999999999999      9999999999998775

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.63  E-value=5.8e-13  Score=120.83  Aligned_cols=299  Identities=12%  Similarity=0.080  Sum_probs=212.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCC---CChHHHHHHHHHHHHHHHHHHHHHhhcc---ccC------CCCCHHHHHH
Q 017191            8 KPAMAMLALQFSYAVVALSTRAALLQG---MNPRVFVVYRQAIATLFMAPMAYLSSRK---YKS------SSMGLRSFSL   75 (375)
Q Consensus         8 ~g~l~~l~~~~~~~~~~~~~k~~~~~~---~~p~~~~~~r~~~~~~~l~~~~~~~~~~---~~~------~~~~~~~~~~   75 (375)
                      .-.+.++...+-++...+..|+.-..+   ..|-..++.--.+-.++.....+...++   +..      ....+++...
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            456677778888899999999886554   5566666665555555555554444211   110      1235556777


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcC
Q 017191           76 IFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRG  155 (375)
Q Consensus        76 ~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~  155 (375)
                      +.+.+++. ++.+.++|.++.+.+++..++.+++..+.|+++.++++++|++++      ||.+..+.++|+.++.....
T Consensus        95 ~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   95 VSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCC
Confidence            88888888 787889999999999999999999999999999999999999999      99999999999999983111


Q ss_pred             CcccCcCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHH-HHHHHHHHHHHHHHHhcCC
Q 017191          156 PKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSA-WMCFLATLQSATFAIFTEP  234 (375)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~  234 (375)
                      +   .....+       .....+...|....+.+.++-++..++.++..|+.+.+..+.- ...++|.+..+...+..+.
T Consensus       168 ~---~~~a~~-------~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~  237 (345)
T KOG2234|consen  168 S---PTGAKS-------ESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDG  237 (345)
T ss_pred             C---CCCccC-------CCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            1   110000       1334566789999999999999999999999977654444443 4444444444444444433


Q ss_pred             CCcccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhh
Q 017191          235 DPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILG  314 (375)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g  314 (375)
                      +...|.. .-..|-...+..++..+++-.+....+|+.+-..=.....+..+++.+.++.+++-+||....+|+.+++.+
T Consensus       238 ~~i~~~g-ff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~S  316 (345)
T KOG2234|consen  238 EAINEYG-FFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILS  316 (345)
T ss_pred             cccccCC-ccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHH
Confidence            3222211 111222233333344555556666778888888888888899999999999999999999999999999999


Q ss_pred             hhheeecccc
Q 017191          315 LYAVLWGKAK  324 (375)
Q Consensus       315 ~~l~~~~~~~  324 (375)
                      +.++...+.+
T Consensus       317 i~lY~~~P~~  326 (345)
T KOG2234|consen  317 IFLYSLYPAR  326 (345)
T ss_pred             HHHhhcCCcc
Confidence            9999855443

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.61  E-value=9.2e-15  Score=123.94  Aligned_cols=255  Identities=13%  Similarity=0.099  Sum_probs=197.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHH
Q 017191           38 RVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVM  117 (375)
Q Consensus        38 ~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll  117 (375)
                      ..+++.++.+-.++.-++..+++..    +.+....+....+++.. .++...-+.|+|+.+=....+-.+-.|+-++++
T Consensus        54 laLVf~qC~~N~vfAkvl~~ir~~~----~~D~t~~~~YaAcs~sY-LlAMVssN~Alq~vpYPTqVlgKScKPIPVMil  128 (337)
T KOG1580|consen   54 LALVFFQCTANTVFAKVLFLIRKKT----EIDNTPTKMYAACSASY-LLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL  128 (337)
T ss_pred             HHHHHHHHHHHHHHHHhheeecccc----cccCCcchHHHHHHHHH-HHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence            4455666666665554443333321    22333344556666655 788889999999999887778889999999999


Q ss_pred             HHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHH
Q 017191          118 ASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWL  197 (375)
Q Consensus       118 ~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~  197 (375)
                      ++++.+++.+|+      +..++++.++|+++... +.....             +.++.....|.++.+++-..-++..
T Consensus       129 GVl~~~KsY~w~------kY~cVL~IV~GValFmY-K~~Kv~-------------g~e~~t~g~GElLL~lSL~mDGlTg  188 (337)
T KOG1580|consen  129 GVLFAHKSYHWR------KYCCVLMIVVGVALFMY-KENKVG-------------GAEDKTFGFGELLLILSLAMDGLTG  188 (337)
T ss_pred             ehhhhcccccHH------HHHHHHHHHHHHHHhhc-cccccC-------------CCcccccchHHHHHHHHHHhcccch
Confidence            999999999999      99999999999999984 322222             1334455789999999999999999


Q ss_pred             HHHHHhhhhCC-cHHHHHHHHHHHHHHHHHHHHHhcCCC--CcccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCc
Q 017191          198 ILQVPVSASYP-DHLSLSAWMCFLATLQSATFAIFTEPD--PEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGP  274 (375)
Q Consensus       198 v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~  274 (375)
                      ..+.+..+.+. ..-..+++..+.+.+.+..-.+++.+-  +..+..-.+..|+.+..+++ ++++++++.+..+...||
T Consensus       189 ~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgP  267 (337)
T KOG1580|consen  189 SIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGP  267 (337)
T ss_pred             hHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCC
Confidence            99888776653 456778888888888777666554321  11222335667888888888 899999999999999999


Q ss_pred             chhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhe
Q 017191          275 LFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAV  318 (375)
Q Consensus       275 ~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~  318 (375)
                      ..-|++..+.-.|+++.++++++..++..||+|..+++.|+..=
T Consensus       268 LtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D  311 (337)
T KOG1580|consen  268 LTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD  311 (337)
T ss_pred             eeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence            99999999999999999999999999999999999999997764

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.61  E-value=1e-13  Score=123.74  Aligned_cols=232  Identities=13%  Similarity=0.071  Sum_probs=171.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhH
Q 017191           68 MGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGA  147 (375)
Q Consensus        68 ~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv  147 (375)
                      .++|+...+.+.+++. .+.+.+.+.++++.+++..+++.++..+++++++++++|+|++++      ||+++.+.++|+
T Consensus        12 ~~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv   84 (244)
T PF04142_consen   12 KSPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGV   84 (244)
T ss_pred             HhHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHH
Confidence            3678888899999998 899999999999999999999999999999999999999999999      999999999999


Q ss_pred             hHHhhhcCCcccCcCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-cHHHHHHHHHHHHHHHHH
Q 017191          148 ISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYP-DHLSLSAWMCFLATLQSA  226 (375)
Q Consensus       148 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~  226 (375)
                      .++...+.......+. ++  . ..+........|.++.++++++-++..++.++..|+.+ +....+......|.+..+
T Consensus        85 ~lv~~~~~~~~~~~~~-~~--~-~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~  160 (244)
T PF04142_consen   85 VLVQLSSSQSSDNSSS-SS--V-HHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNL  160 (244)
T ss_pred             heeecCCccccccccc-cc--c-ccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHH
Confidence            9987522221100000 00  0 00112345679999999999999999999999988864 344555556666666655


Q ss_pred             HHHHhcCCCCcccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhh
Q 017191          227 TFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLV  306 (375)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~i  306 (375)
                      +.....+.+.. .+......+-...+..++...++-.+....+|+.+...=+.....+.+++.++++++++.+++....+
T Consensus       161 ~~~~~~~~~~~-~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~l  239 (244)
T PF04142_consen  161 LALLLSDGSAI-SESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLL  239 (244)
T ss_pred             HHHhccccccc-ccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhh
Confidence            55444332110 11111111112223333455556677788999999999999999999999999999999999999999


Q ss_pred             hHHHH
Q 017191          307 GAIGV  311 (375)
Q Consensus       307 G~~li  311 (375)
                      |+.++
T Consensus       240 g~~~V  244 (244)
T PF04142_consen  240 GAALV  244 (244)
T ss_pred             heecC
Confidence            98753

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.57  E-value=4.2e-14  Score=108.82  Aligned_cols=136  Identities=15%  Similarity=0.112  Sum_probs=118.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHh
Q 017191          182 GCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVS  261 (375)
Q Consensus       182 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  261 (375)
                      ..++++++++++++..+..|--.++. ||...++.+.....+.+..+.+.+.+ .......++..|..+...|+ .++++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSGl-a~gls   80 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSGL-AGGLS   80 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHHH-HHHHH
Confidence            56889999999999999999888888 79999999999988888877776543 22222236778888888886 89999


Q ss_pred             HHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheee
Q 017191          262 FCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLW  320 (375)
Q Consensus       262 ~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~  320 (375)
                      ..+|++|+|...++.+..+.-++|+++.+++++++||+++..+++|+.+|++|.+++.+
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999999999999999999999999999999999988654

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.57  E-value=7.9e-13  Score=118.25  Aligned_cols=289  Identities=13%  Similarity=0.101  Sum_probs=215.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHH--HHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHH
Q 017191            7 YKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVV--YRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGV   84 (375)
Q Consensus         7 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~--~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   84 (375)
                      ..+.+..+.-.++--...+..|..+.+---|..+..  ++.+.+.+.+...-..+--+.  +..+++..+..+...++. 
T Consensus        11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~--~~l~~~~~kk~~P~~~lf-   87 (314)
T KOG1444|consen   11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNF--RPLDLRTAKKWFPVSLLF-   87 (314)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeec--CCcChHHHHHHccHHHHH-
Confidence            344445555555555566777888764222444444  777777666655533332232  567889999999999988 


Q ss_pred             HHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCC
Q 017191           85 TINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFL  164 (375)
Q Consensus        85 ~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~  164 (375)
                      .+...+--.+++|.+....+++.+..|+++++...+++|.|++..      .+.++...++|..+...            
T Consensus        88 ~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~------------  149 (314)
T KOG1444|consen   88 VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAF------------  149 (314)
T ss_pred             HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhcc------------
Confidence            788888889999999999999999999999999999999999998      99999988888887763            


Q ss_pred             ccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-cHHHHHHHHHHHHHHHHHHHHHhcCCCC----ccc
Q 017191          165 PEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYP-DHLSLSAWMCFLATLQSATFAIFTEPDP----EAW  239 (375)
Q Consensus       165 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~~~  239 (375)
                               .+......|..+++...++-+.+.+..|+..+..+ +.....++..+.+........+++++..    ..-
T Consensus       150 ---------~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~  220 (314)
T KOG1444|consen  150 ---------TDLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFD  220 (314)
T ss_pred             ---------ccceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcc
Confidence                     22223345899999999999999999998765543 4556777888888777777776664311    111


Q ss_pred             ccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhee
Q 017191          240 NLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVL  319 (375)
Q Consensus       240 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~  319 (375)
                      +......+..+...++++-++.| +-.++.+..+++..++++..+-..+.+...++++++.++...+|..+-++|.+++.
T Consensus       221 ~~~~~~~~~~~~lScv~gf~isy-~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~  299 (314)
T KOG1444|consen  221 NWSDSSVLVVMLLSCVMGFGISY-TSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS  299 (314)
T ss_pred             cccchhHHHHHHHHHHHHHHHHH-HHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence            12234456666666775555555 45689999999999999988888888888888888999999999999999999998


Q ss_pred             ecccccc
Q 017191          320 WGKAKDH  326 (375)
Q Consensus       320 ~~~~~~~  326 (375)
                      +.+.+++
T Consensus       300 ~~~~~~k  306 (314)
T KOG1444|consen  300 YATFRKK  306 (314)
T ss_pred             hhhhhhc
Confidence            8776554

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.53  E-value=4.3e-14  Score=113.37  Aligned_cols=125  Identities=22%  Similarity=0.388  Sum_probs=111.0

Q ss_pred             HHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 017191           18 FSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYL   97 (375)
Q Consensus        18 ~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~   97 (375)
                      ++||...++.|...++ .+|....++|+..+.+ +.++....+++.. ...+++++...+..+.++..+++.++++++++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~   77 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPF-KNLSPRQWLWLLFLGLLGTALAYLLYFYALKY   77 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccc-cCCChhhhhhhhHhhccceehHHHHHHHHHHh
Confidence            4799999999999866 9999999999999998 6665555554433 45688888899999998669999999999999


Q ss_pred             cchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHh
Q 017191           98 ASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMA  151 (375)
Q Consensus        98 ~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~  151 (375)
                      .+++.++++.++.|+++.+++++++||+++++      +++|+++++.|++++.
T Consensus        78 ~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   78 ISASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS  125 (126)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999      9999999999999875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.50  E-value=1.1e-12  Score=115.83  Aligned_cols=265  Identities=15%  Similarity=0.136  Sum_probs=205.8

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHH
Q 017191           36 NPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITF  115 (375)
Q Consensus        36 ~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~  115 (375)
                      ++....+.+.+.+.++-....  ..++.  ....++.|..+...++.+ .++..|.+.|++|++=-...+-...-.+-++
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l--~~~k~--~~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVm  124 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAML--KWWKK--ELSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVM  124 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHH--hcccc--cCCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHH
Confidence            456666777767666654333  33333  233556678888888888 8899999999999998888888888888899


Q ss_pred             HHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCCCCchHHHHHHHHHHHHHHHH
Q 017191          116 VMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSL  195 (375)
Q Consensus       116 ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~  195 (375)
                      +++.++.|.|.+.+      +.+...+.-.|+.+..+.+..+..+            ..+..+...|..+....-++-++
T Consensus       125 lmg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~s~~------------~~g~~ns~~G~~Ll~~~L~fDgf  186 (327)
T KOG1581|consen  125 LMGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSDSSS------------KSGRENSPIGILLLFGYLLFDGF  186 (327)
T ss_pred             HHHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCCCcc------------ccCCCCchHhHHHHHHHHHHHhh
Confidence            99999999999999      9999999999999888643222110            13334567899999999999999


Q ss_pred             HHHHHHHhhhhCC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCc--ccccccchhhHHHHhhhhhhhhHhHHHHHHHhccC
Q 017191          196 WLILQVPVSASYP-DHLSLSAWMCFLATLQSATFAIFTEPDPE--AWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKR  272 (375)
Q Consensus       196 ~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~  272 (375)
                      .+..+.++.+++. ++...++...+++.+......+.......  .+-...+..+.-++.... ++.+++.+.++-+++.
T Consensus       187 Tn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~F  265 (327)
T KOG1581|consen  187 TNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIERF  265 (327)
T ss_pred             HHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhhc
Confidence            9999999887654 68888999999888877766443222111  111123445556666666 6889999999999999


Q ss_pred             CcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecccc
Q 017191          273 GPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAK  324 (375)
Q Consensus       273 ~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~  324 (375)
                      |+...+.++.+.-++++.++.+.+|.+++..||+|..+++.|+.+-...|++
T Consensus       266 Gslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  266 GSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999987666555

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.50  E-value=3.2e-12  Score=112.88  Aligned_cols=253  Identities=13%  Similarity=0.109  Sum_probs=185.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcccc--CCCCCHHHHH-HHHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHH
Q 017191           37 PRVFVVYRQAIATLFMAPMAYLSSRKYK--SSSMGLRSFS-LIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAI  113 (375)
Q Consensus        37 p~~~~~~r~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~  113 (375)
                      |..++..++++-.++-......++++..  +-..+|++.. ++...++.. ++.-.+-+++++|++.+..++..+..++|
T Consensus        45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVtlSlYTM~KSSsi~F  123 (349)
T KOG1443|consen   45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVTLSLYTMTKSSSILF  123 (349)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceeeeeeeeeeeeccccHHHH
Confidence            7888888887777666665555544332  1346677654 555666666 89999999999999999999999999999


Q ss_pred             HHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCCCCchHHHHHHHHHHHHHH
Q 017191          114 TFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCW  193 (375)
Q Consensus       114 ~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~  193 (375)
                      +.+++.+|.-||+++.      -..-+++..+|+++... +.                    .+....|.++.++++++-
T Consensus       124 IllFs~if~lEk~~w~------L~l~v~lI~~Glflft~-Ks--------------------Tqf~i~Gf~lv~~aS~~s  176 (349)
T KOG1443|consen  124 ILLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFTY-KS--------------------TQFNIEGFFLVLAASLLS  176 (349)
T ss_pred             HHHHHHHHHhHHHHHH------HHHHHHHHhhheeEEEe-cc--------------------cceeehhHHHHHHHHHhh
Confidence            9999999999999998      88888888888888874 11                    223456877777777666


Q ss_pred             HHHHHHHHHhhhhC----CcHHHHHHHHHHHHHHHHHHHHHhcCCCCc-----ccccccc-hhhHHHHhhhhhhhhHhHH
Q 017191          194 SLWLILQVPVSASY----PDHLSLSAWMCFLATLQSATFAIFTEPDPE-----AWNLHSS-LEIFCCFFSGAIGSGVSFC  263 (375)
Q Consensus       194 a~~~v~~k~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~g~~~~~~~~~  263 (375)
                      ++-....+..+++.    ++|....+...-...+.+.+..+.+|+...     .+...++ ..+..+..++. ++..++.
T Consensus       177 GlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~  255 (349)
T KOG1443|consen  177 GLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFL  255 (349)
T ss_pred             hhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHH
Confidence            65555544444443    267777887777778888888888776421     1222222 22333333332 3444443


Q ss_pred             HH---HHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhe
Q 017191          264 VQ---AWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAV  318 (375)
Q Consensus       264 ~~---~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~  318 (375)
                      +-   +....+++....++.+...-+.+.+++..+.+|+++...|+|..+.+.|+.+.
T Consensus       256 l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  256 LEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            32   34477888889999999999999999999999999999999999999999997

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.47  E-value=2e-13  Score=109.49  Aligned_cols=125  Identities=17%  Similarity=0.357  Sum_probs=108.3

Q ss_pred             HHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHhHHHHHHHhc
Q 017191          191 CCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCIS  270 (375)
Q Consensus       191 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~  270 (375)
                      ++||.+.+..|+..++. |+....++++..+.+ ..+.....+...  ....+...+...++.+++++.+++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            47899999999999988 699999999999987 666665544332  23335567778888888889999999999999


Q ss_pred             cCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhee
Q 017191          271 KRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVL  319 (375)
Q Consensus       271 ~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~  319 (375)
                      +.+++.++.+.+++|+++.++++++++|+++..+++|++++++|+++..
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999988753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.32  E-value=9.6e-10  Score=98.02  Aligned_cols=251  Identities=17%  Similarity=0.156  Sum_probs=172.6

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCC--HHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhhhh-hhhHH
Q 017191           36 NPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMG--LRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMG-NLIPA  112 (375)
Q Consensus        36 ~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~-~~~pi  112 (375)
                      +|..-.+-- .++++++..+..+..+    |..+  .+.+...++.|++. .+++...+.+.++.+.+.+.++. .++-+
T Consensus        11 ~~~~Q~lG~-t~Gali~alv~~~~~~----p~~~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLv   84 (269)
T PF06800_consen   11 KPANQILGT-TIGALIFALVVFLFRQ----PAFSMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLV   84 (269)
T ss_pred             cHHHHHHHH-HHHHHHHHHHHHHHhC----CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHH
Confidence            344443332 3344444444444433    3344  48888889999998 99999999999999999999996 68888


Q ss_pred             HHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCCCCchHHHHHHHHHHHHH
Q 017191          113 ITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACC  192 (375)
Q Consensus       113 ~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~  192 (375)
                      .+.++++++++|.-+..  .-.-..+++++.++|+.+....++.+..             .+++.+...|....+.+.+.
T Consensus        85 g~sl~gv~~fgEW~~~~--~~~~G~~Al~liiiGv~lts~~~~~~~~-------------~~~~~~~~kgi~~Ll~stig  149 (269)
T PF06800_consen   85 GTSLIGVLFFGEWTTTT--QKIIGFLALVLIIIGVILTSYQDKKSDK-------------SSSKSNMKKGILALLISTIG  149 (269)
T ss_pred             HHHHHHHhhcCCCCCcc--hHHHHHHHHHHHHHHHHHhccccccccc-------------cccccchhhHHHHHHHHHHH
Confidence            99999999999998876  1111234777888888887742222110             01244567899999999999


Q ss_pred             HHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHhHHHHHHHhccC
Q 017191          193 WSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKR  272 (375)
Q Consensus       193 ~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~  272 (375)
                      |..|.+..|..  +. ++....+-+...-.+....+....++.  ..   ....|.. +..|+ .-.++..++..+.++.
T Consensus       150 y~~Y~~~~~~~--~~-~~~~~~lPqaiGm~i~a~i~~~~~~~~--~~---~k~~~~n-il~G~-~w~ignl~~~is~~~~  219 (269)
T PF06800_consen  150 YWIYSVIPKAF--HV-SGWSAFLPQAIGMLIGAFIFNLFSKKP--FF---EKKSWKN-ILTGL-IWGIGNLFYLISAQKN  219 (269)
T ss_pred             HHHHHHHHHhc--CC-ChhHhHHHHHHHHHHHHHHHhhccccc--cc---ccchHHh-hHHHH-HHHHHHHHHHHhHHhc
Confidence            99999998853  34 566666655443333333333322111  11   1122323 22344 4567788889999999


Q ss_pred             CcchhhhhhhHHHHHHHHHHHHHhcccccchh----hhhHHHHHhhhhh
Q 017191          273 GPLFSAMFNPLCTVIVTILAALLLHEEIYTGS----LVGAIGVILGLYA  317 (375)
Q Consensus       273 ~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~----~iG~~lil~g~~l  317 (375)
                      |.+..=.+..+.++++.+.+.+++||+=+..+    ++|.++++.|.++
T Consensus       220 G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  220 GVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             cchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            99999999999999999999999999877654    4688888888764

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.31  E-value=6.6e-11  Score=107.49  Aligned_cols=134  Identities=15%  Similarity=0.272  Sum_probs=115.1

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHCCCCh--HHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHH
Q 017191            5 RDYKPAMAMLALQFSYAVVALSTRAALLQGMNP--RVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALL   82 (375)
Q Consensus         5 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p--~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   82 (375)
                      ...+|.+++++++++|+...+..|...++ .++  .....+++.++.+++.++....++..   ..+.+++...+..+++
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~  200 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPNP---QALSLQWGALLYLGLI  200 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCCC---CcchHHHHHHHHHHHH
Confidence            34679999999999999999999998654 664  45555789999998888876654332   2367788888889998


Q ss_pred             HHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHh
Q 017191           83 GVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAI  148 (375)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~  148 (375)
                      +..+++.+|++++++.+++.++.+.++.|+++.++++++++|++++.      +++|..+.+.|+.
T Consensus       201 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~~  260 (260)
T TIGR00950       201 GTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhcC
Confidence            87899999999999999999999999999999999999999999999      9999999998863

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.29  E-value=2.7e-10  Score=99.52  Aligned_cols=280  Identities=14%  Similarity=0.083  Sum_probs=191.5

Q ss_pred             HHHHHHHHHHHH---CCC----ChHHHHHHHHHHHHHHHHHHHHHhhccccC---C-------CC--CHHHHHHHHHHHH
Q 017191           21 AVVALSTRAALL---QGM----NPRVFVVYRQAIATLFMAPMAYLSSRKYKS---S-------SM--GLRSFSLIFFIAL   81 (375)
Q Consensus        21 ~~~~~~~k~~~~---~~~----~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~---~-------~~--~~~~~~~~~~~g~   81 (375)
                      ..+.+.+|.+=+   ++.    .|+.....-++.-..+++.+.+++.+...+   .       ..  +.+ ....+..++
T Consensus        16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~-p~lfl~Pal   94 (372)
T KOG3912|consen   16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN-PVLFLPPAL   94 (372)
T ss_pred             cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC-cceecChHH
Confidence            345667776622   222    255555555555567777776666543220   0       00  111 223344777


Q ss_pred             HHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCc
Q 017191           82 LGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNT  161 (375)
Q Consensus        82 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~  161 (375)
                      +- ..+..+.|.|+.+++++.-+.+.....+|+.+++.-+++.+++.+      +|+|+.....|++++...+-.  .+.
T Consensus        95 ~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~d~~--~~~  165 (372)
T KOG3912|consen   95 CD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSLDVH--LVT  165 (372)
T ss_pred             HH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeeeecc--ccc
Confidence            77 677778889999999999999999999999999999999999999      999999999999998742111  111


Q ss_pred             CCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-cHHHHHHHHHHHHHHHHHHHHHhc----CCCC
Q 017191          162 EFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYP-DHLSLSAWMCFLATLQSATFAIFT----EPDP  236 (375)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~----~~~~  236 (375)
                      ++         -.+-++...|+++.+.+-+.-|+.+++-+|..++.+ +|.....|..++|..++..++...    .++.
T Consensus       166 ~p---------~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~s  236 (372)
T KOG3912|consen  166 DP---------YTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDS  236 (372)
T ss_pred             CC---------ccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCc
Confidence            00         122355678999999999999999999999887765 799999999999966554444321    1111


Q ss_pred             c------cccc-------ccchhhHHHHhhhhhhhhHh-HHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccc
Q 017191          237 E------AWNL-------HSSLEIFCCFFSGAIGSGVS-FCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYT  302 (375)
Q Consensus       237 ~------~~~~-------~~~~~~~~~~~~g~~~~~~~-~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~  302 (375)
                      .      .|..       ........+...|...+..- .+.-.+-.|..+++.-.++-.+...+--+++.....|.+..
T Consensus       237 fS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~l  316 (372)
T KOG3912|consen  237 FSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHL  316 (372)
T ss_pred             CcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHH
Confidence            1      0110       01111222233333222111 11122346778888888999999999999999999999999


Q ss_pred             hhhhhHHHHHhhhhhee
Q 017191          303 GSLVGAIGVILGLYAVL  319 (375)
Q Consensus       303 ~~~iG~~lil~g~~l~~  319 (375)
                      .|+.|.++.+.|+++++
T Consensus       317 lqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  317 LQILGFLILIMGIILYN  333 (372)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999999975

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.23  E-value=4.1e-11  Score=94.44  Aligned_cols=104  Identities=18%  Similarity=0.308  Sum_probs=87.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccc-CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHH
Q 017191           42 VYRQAIATLFMAPMAYLSSRKYK-SSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASI  120 (375)
Q Consensus        42 ~~r~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l  120 (375)
                      .+|++.+.+++..+...+++.+. .+..+++.+.+.+..|+++...++.++++|+++.+ +.++++.+++|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            57888998888888776554322 12234455677778888885699999999999999 58889999999999999999


Q ss_pred             hhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191          121 VGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus       121 ~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      ++|||++++      ++.+++++++|++++..
T Consensus        81 ~~~er~~~~------~~~a~~l~~~Gv~li~~  106 (113)
T PF13536_consen   81 FFKERLSPR------RWLAILLILIGVILIAW  106 (113)
T ss_pred             HhcCCCCHH------HHHHHHHHHHHHHHHhh
Confidence            999999999      99999999999999984

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.17  E-value=1.7e-10  Score=97.44  Aligned_cols=290  Identities=13%  Similarity=0.104  Sum_probs=195.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHH-CCCC-hHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHH
Q 017191            7 YKPAMAMLALQFSYAVVALSTRAALL-QGMN-PRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGV   84 (375)
Q Consensus         7 ~~g~l~~l~~~~~~~~~~~~~k~~~~-~~~~-p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   84 (375)
                      ....+--+.+.++.   .+..|..++ .|++ -+.+.+.+.+...+-+..+-..+-.+.     +.++.+..+..+.+. 
T Consensus         8 ~~~~lsYc~sSIlm---TltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~f-----R~t~aK~WfpiSfLL-   78 (309)
T COG5070           8 LTASLSYCFSSILM---TLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEF-----RLTKAKKWFPISFLL-   78 (309)
T ss_pred             chHHHHHHHHHHHH---HHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhe-----ehhhhhhhcCHHHHH-
Confidence            33344444444443   333455443 2333 245556666665555554433332222     223333333444444 


Q ss_pred             HHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCC
Q 017191           85 TINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFL  164 (375)
Q Consensus        85 ~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~  164 (375)
                      ..-...-..+++|.+....+++.++..+.++....+++|.|++-.      +....++.+..-+.....+.+..      
T Consensus        79 v~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl------~l~SFilMvlSS~va~w~D~q~~------  146 (309)
T COG5070          79 VVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSL------ELLSFILMVLSSVVATWGDQQAS------  146 (309)
T ss_pred             HHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchh------hHHHHHHHHHHHHHhccchhhHH------
Confidence            344445568999999999999999999999999999999999999      99888888777666653111100      


Q ss_pred             ccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCcc--ccc
Q 017191          165 PEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYP-DHLSLSAWMCFLATLQSATFAIFTEPDPEA--WNL  241 (375)
Q Consensus       165 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~  241 (375)
                              +-..+..+.|.+++..-.+.-+.|....|+..+-.+ .....+++..+.+.-++..+.+.+|.....  -+.
T Consensus       147 --------~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~ann  218 (309)
T COG5070         147 --------AFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANN  218 (309)
T ss_pred             --------HHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcC
Confidence                    011224467999999999999999999887653321 356778889999888888888877643221  111


Q ss_pred             ccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeec
Q 017191          242 HSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWG  321 (375)
Q Consensus       242 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~  321 (375)
                      .+...+.++...|+ +++.--++-.|+++.++.+..++++.++-.-..+.|.++++|+.+..++..+.+-..+..++...
T Consensus       219 l~~d~l~am~ISgl-~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYava  297 (309)
T COG5070         219 LSVDSLMAMFISGL-CSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVA  297 (309)
T ss_pred             CChHHHHHHHHHHH-HHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHH
Confidence            22334555666666 44444457789999999999999999999999999999999999999999998888887777776


Q ss_pred             ccccc
Q 017191          322 KAKDH  326 (375)
Q Consensus       322 ~~~~~  326 (375)
                      |++++
T Consensus       298 ks~k~  302 (309)
T COG5070         298 KSKKQ  302 (309)
T ss_pred             HHHHH
Confidence            65543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=99.15  E-value=3.9e-08  Score=91.28  Aligned_cols=300  Identities=13%  Similarity=0.015  Sum_probs=185.0

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHH-HHHHHHHHHHHH-HHHhhcccc--CCCCCHHHHHHHHHHH
Q 017191            5 RDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVY-RQAIATLFMAPM-AYLSSRKYK--SSSMGLRSFSLIFFIA   80 (375)
Q Consensus         5 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~-r~~~~~~~l~~~-~~~~~~~~~--~~~~~~~~~~~~~~~g   80 (375)
                      +...|++..+++.++||+..+-.|..  +..+- +.... -.+++.++.-.. ..+..+...  ....+.+.+...++.|
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~~--k~w~w-E~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G   80 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKKV--KKWSW-ETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG   80 (345)
T ss_pred             hhHHHHHHHHHHHHHhhccccccccc--CCCch-hHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence            45789999999999999999999974  32332 22111 111111111100 111111100  1224677888888999


Q ss_pred             HHHHHHHHHHHHhhhcccchhhHhhh-hhhhHHHHHHHHHHhhcccc---CCCccchhhhhhhHHHHhhhHhHHhhhcCC
Q 017191           81 LLGVTINQNTYFEGLYLASSSMASAM-GNLIPAITFVMASIVGLEKI---DLGSVRSVAKILGTIFCVGGAISMALLRGP  156 (375)
Q Consensus        81 ~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~pi~~~ll~~l~~~e~~---~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~  156 (375)
                      ++. ..++..++.++++.+.+.+..+ ..++-++..++..++++|-.   +.  .-+....+|+++.++|+++...-+..
T Consensus        81 ~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t--~~g~~~~~gv~liliGi~l~s~Ag~~  157 (345)
T PRK13499         81 ALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLAT--NGGRMTLLGVLVALIGVAIVGRAGQL  157 (345)
T ss_pred             HHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHcccccccccc--chHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            998 9999999999999999999988 47999999999999998764   32  23444778999999999998852111


Q ss_pred             cccCcCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHH-------HHHHHhh-hhCCcHHHHHHHHHH---HHHHHH
Q 017191          157 KLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWL-------ILQVPVS-ASYPDHLSLSAWMCF---LATLQS  225 (375)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------v~~k~~~-~~~~~~~~~~~~~~~---~~~i~~  225 (375)
                      ...+.   ++     +..++.+..+|..+++++.+.++.|+       ...+... ... ++.....-+..   .+.++.
T Consensus       158 k~~~~---~~-----~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~-~~~~~~lp~~~~~~~G~~~~  228 (345)
T PRK13499        158 KERKM---GI-----KKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGV-DPLYAALPSYVVIMGGGAIT  228 (345)
T ss_pred             ccccc---cc-----ccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCC-CchHHHHHHHHHHHHHHHHH
Confidence            10000   00     00234566899999999999999999       4433211 122 33333333333   444433


Q ss_pred             HH-HHHh---cCCCCccccc-cc-----chhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhh---h-hhHHHHHHHHH
Q 017191          226 AT-FAIF---TEPDPEAWNL-HS-----SLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAM---F-NPLCTVIVTIL  291 (375)
Q Consensus       226 ~~-~~~~---~~~~~~~~~~-~~-----~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~---~-~~~~pv~~~~~  291 (375)
                      .. +...   ..++...... ..     ..........|+ .=.+++.++..+.++.+......   + +.+..+++.+.
T Consensus       229 n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistlw  307 (345)
T PRK13499        229 NLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLW  307 (345)
T ss_pred             HHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHh
Confidence            32 2221   2121111111 11     123333334444 56677778888888876654433   3 47788999999


Q ss_pred             HHHHhccccc------chhhhhHHHHHhhhhheeec
Q 017191          292 AALLLHEEIY------TGSLVGAIGVILGLYAVLWG  321 (375)
Q Consensus       292 ~~l~~~e~~~------~~~~iG~~lil~g~~l~~~~  321 (375)
                      |.+ +||.=+      ..-++|.+++++|..+....
T Consensus       308 Gi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        308 GLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             hhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            994 899766      55578999999998887654

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.14  E-value=1.9e-09  Score=99.71  Aligned_cols=136  Identities=18%  Similarity=0.168  Sum_probs=113.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191            6 DYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT   85 (375)
Q Consensus         6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   85 (375)
                      ...|.++.++++++|+...+..|...+ +.++..... -.+++.+++.++...... .  ...+...+...+..|+++..
T Consensus       146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~-~~~~~~~~~-~~~~~~~~l~~~~~~~~~-~--~~~~~~~~~~~l~lgv~~t~  220 (293)
T PRK10532        146 DLTGAALALGAGACWAIYILSGQRAGA-EHGPATVAI-GSLIAALIFVPIGALQAG-E--ALWHWSILPLGLAVAILSTA  220 (293)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHH-HHHHHHHHHHHHHHHccC-c--ccCCHHHHHHHHHHHHHHHH
Confidence            356899999999999999999998854 477777644 445666666666554332 1  23455666667789999889


Q ss_pred             HHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           86 INQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        86 ~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      +++.+|++++++.+++.++++.+++|++..++++++++|+++..      +++|..+.+.|++....
T Consensus       221 ~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        221 LPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTL  281 (293)
T ss_pred             HHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999      99999999999998874

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.13  E-value=2.2e-09  Score=99.30  Aligned_cols=138  Identities=15%  Similarity=0.122  Sum_probs=116.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191            6 DYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT   85 (375)
Q Consensus         6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   85 (375)
                      ...|.++.++++++|+......|... . -++....++++.++.+.+.++......... ...+.+.|..++..++++..
T Consensus       148 ~~~G~l~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~i~~s~  224 (292)
T PRK11272        148 NPWGAILILIASASWAFGSVWSSRLP-L-PVGMMAGAAEMLAAGVVLLIASLLSGERLT-ALPTLSGFLALGYLAVFGSI  224 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhcC-C-CcchHHHHHHHHHHHHHHHHHHHHcCCccc-ccCCHHHHHHHHHHHHHHHH
Confidence            35799999999999999999999863 2 345666778888888887777654433221 12356788888999999888


Q ss_pred             HHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           86 INQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        86 ~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      +++.+|++++++.+++.++++..+.|++++++++++++|++++.      +++|..+.+.|+.+...
T Consensus       225 ~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        225 IAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999      99999999999998864

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.12  E-value=3.5e-10  Score=93.86  Aligned_cols=218  Identities=17%  Similarity=0.104  Sum_probs=160.8

Q ss_pred             HHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCC
Q 017191           77 FFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGP  156 (375)
Q Consensus        77 ~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~  156 (375)
                      ....++. .+.+..|..+++..+++.++.+..-.-.|+.+++++++|+|+...      ++++.++++.|++++...+  
T Consensus        57 aPF~i~W-t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~D--  127 (290)
T KOG4314|consen   57 APFSIFW-TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYAD--  127 (290)
T ss_pred             cceEEEE-ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEecc--
Confidence            3344455 788999999999999999999999999999999999999999999      9999999999999987421  


Q ss_pred             cccCcCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHH----HHHH-HHHh
Q 017191          157 KLLNTEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATL----QSAT-FAIF  231 (375)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i----~~~~-~~~~  231 (375)
                                       ........|+.+++.+++..|+|-++.|....+.+ --....++..+|..    ...+ +.+.
T Consensus       128 -----------------N~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn-~Gdaa~FmS~LGF~NL~~~~~~~lIL~  189 (290)
T KOG4314|consen  128 -----------------NEHADEIIGIACAVGSAFMAALYKVLFKMFIGNAN-FGDAAHFMSCLGFFNLCFISFPALILA  189 (290)
T ss_pred             -----------------chhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCc-chhHHHHHHHHHHHHHHHHhhhHHHHH
Confidence                             11223468999999999999999999998765542 22222222222222    1111 1122


Q ss_pred             cCCCCcccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHH
Q 017191          232 TEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGV  311 (375)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~li  311 (375)
                      .+ ....|+......|..++..+.+.. .-.++.+.++....|...|+-+.+..+-....+.++-+-..+...+.|.+++
T Consensus       190 ~T-~VE~~qsFA~~PWG~l~G~A~L~l-AFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI  267 (290)
T KOG4314|consen  190 FT-GVEHLQSFAAAPWGCLCGAAGLSL-AFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCII  267 (290)
T ss_pred             Hh-chHHHHHHhhCCchhhhhHHHHHH-HHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            21 222343333446667666665433 3345667888899999999999999999999999887767899999999999


Q ss_pred             Hhhhhheeeccc
Q 017191          312 ILGLYAVLWGKA  323 (375)
Q Consensus       312 l~g~~l~~~~~~  323 (375)
                      +.|.++......
T Consensus       268 ~i~FiLiiiP~d  279 (290)
T KOG4314|consen  268 CIGFILIIIPED  279 (290)
T ss_pred             HHhHHheecccc
Confidence            999988876544

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.12  E-value=1.2e-09  Score=91.01  Aligned_cols=138  Identities=16%  Similarity=0.165  Sum_probs=113.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhh------CCcHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc---c------cchh
Q 017191          182 GCLFLFASACCWSLWLILQVPVSAS------YPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNL---H------SSLE  246 (375)
Q Consensus       182 G~~~~l~a~~~~a~~~v~~k~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~------~~~~  246 (375)
                      |.++++.+.++.+++.++.|+..++      ..++.....+....+.+.+.+..+..|........   .      ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6788999999999999999998776      22899999999999999999998887654311110   0      2234


Q ss_pred             hHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheee
Q 017191          247 IFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLW  320 (375)
Q Consensus       247 ~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~  320 (375)
                      +..++..|+ ...+.....+..+++.+|...++...+..+...++|++++||+++..+++|.++.++|.+++.|
T Consensus        81 ~~~~~~~~~-~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGL-LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            444455555 5566677788999999999999999999999999999999999999999999999999998764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.12  E-value=9.7e-10  Score=101.83  Aligned_cols=139  Identities=12%  Similarity=0.150  Sum_probs=110.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccc--cccchhhHHHHhhhh
Q 017191          178 NWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWN--LHSSLEIFCCFFSGA  255 (375)
Q Consensus       178 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~  255 (375)
                      +...|..++++++++|+...+..|.. .+. ++.+..++++..+.+.+.+...... +.....  ..+...+ .....+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~-~~~~~~~~R~~~a~~~l~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYV-PADEILTHRVIWSFFFMVVLMSICR-QWSYLKTLIQTPQKI-FMLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCC-CHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHcCHHHH-HHHHHHH
Confidence            34679999999999999999999865 566 6999999999999887776655432 111100  0112222 2233555


Q ss_pred             hhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheee
Q 017191          256 IGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLW  320 (375)
Q Consensus       256 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~  320 (375)
                      ++.++.+.++++++++.+++.++++.++.|+++.++++++++|+++..+++|+++.++|+.+...
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~  145 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW  145 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence            67788899999999999999999999999999999999999999999999999999999888653

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.07  E-value=2.3e-09  Score=98.62  Aligned_cols=134  Identities=14%  Similarity=0.176  Sum_probs=102.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHhH
Q 017191          183 CLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSF  262 (375)
Q Consensus       183 ~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  262 (375)
                      .++.++++++||...+..|+..++. ++.  .++.+..+.+.+.++...... ...|..... .++..+..+.++....+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~-~~~--~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE-PDF--LWWALLAHSVLLTPYGLWYLA-QVGWSRLPA-TFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch-hHH--HHHHHHHHHHHHHHHHHHhcc-cCCCCCcch-hhHHHHHHHHHHHHHHH
Confidence            4677899999999999999877765 343  355555566666666554211 123333222 33334444555788889


Q ss_pred             HHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeec
Q 017191          263 CVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWG  321 (375)
Q Consensus       263 ~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~  321 (375)
                      .++++++++.+++.++++.+++|+++.+++++++||+++..+++|++++++|+++....
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999999887653

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.06  E-value=1.5e-10  Score=100.77  Aligned_cols=274  Identities=16%  Similarity=0.111  Sum_probs=192.9

Q ss_pred             HHHHHHHHC---CC-ChHHHHHHHHHHHHHHHHHHHHHhhcccc-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 017191           25 LSTRAALLQ---GM-NPRVFVVYRQAIATLFMAPMAYLSSRKYK-----SSSMGLRSFSLIFFIALLGVTINQNTYFEGL   95 (375)
Q Consensus        25 ~~~k~~~~~---~~-~p~~~~~~r~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al   95 (375)
                      +..|+.++.   .. .|..+++.++++...+...+.....+-..     ..+++.+....+...++.. .+...+-++++
T Consensus        45 f~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL  123 (347)
T KOG1442|consen   45 FLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCL  123 (347)
T ss_pred             hhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceeh
Confidence            345666542   12 37888888888877666655433222111     1235566667777777777 67777888999


Q ss_pred             cccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCC
Q 017191           96 YLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSG  175 (375)
Q Consensus        96 ~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (375)
                      +|.+++...+=..+.-+|+++++++++|+|-+..      -..+..+.+.|-.+=+   +.+               +..
T Consensus       124 ~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~lGv---dqE---------------~~~  179 (347)
T KOG1442|consen  124 KYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGLGV---DQE---------------GST  179 (347)
T ss_pred             hhcceEEEEeccchhhhHHHHhHHhhcccccccc------cceeehhheehheecc---ccc---------------ccc
Confidence            9999999999999999999999999999999987      5555555555443332   111               122


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCcc-cc---cccchhhHHH
Q 017191          176 GENWLLGCLFLFASACCWSLWLILQVPVSASYPD-HLSLSAWMCFLATLQSATFAIFTEPDPEA-WN---LHSSLEIFCC  250 (375)
Q Consensus       176 ~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~---~~~~~~~~~~  250 (375)
                      +...+.|.++.+.++++-|+..+..|+......| -..++++....+.++..|...+. ++.+. +.   .+....|..+
T Consensus       180 ~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~ln-ge~~~v~~~~~l~a~~Fw~~m  258 (347)
T KOG1442|consen  180 GTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILN-GEFQAVVGFPHLPAIKFWILM  258 (347)
T ss_pred             CccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHc-chHHHHcCcccchHHHHHHHH
Confidence            3445789999999999999999999976554433 45667777888877777777654 33321 11   1233455555


Q ss_pred             HhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccccc
Q 017191          251 FFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKD  325 (375)
Q Consensus       251 ~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~~  325 (375)
                      ...|+++-.++| .-.+=+|.++|..-.+-....-..-.++++.+++|.-+..-|-|-++++.|-..+++.|.++
T Consensus       259 tLsglfgF~mgy-vTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~e  332 (347)
T KOG1442|consen  259 TLSGLFGFAMGY-VTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHE  332 (347)
T ss_pred             HHHHHHHHHhhh-eeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHH
Confidence            555554443333 22344888999988888888889999999999999999999999999999999998876543

>TIGR00688 rarD rarD protein

Probab=99.04  E-value=2.5e-09  Score=96.97  Aligned_cols=137  Identities=10%  Similarity=0.101  Sum_probs=107.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCC---cccccccchh-hHHHHhhhhh
Q 017191          181 LGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDP---EAWNLHSSLE-IFCCFFSGAI  256 (375)
Q Consensus       181 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~g~~  256 (375)
                      .|..+.++++++|+...+..|. ..+. ++.+..+++++.+.+.+.+......+..   ..++...... +..+...|+ 
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL-   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH-
Confidence            4888999999999999999997 4456 6999999999999887766554332110   1111111222 333444555 


Q ss_pred             hhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheee
Q 017191          257 GSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLW  320 (375)
Q Consensus       257 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~  320 (375)
                      ..++.+.+++++++++++..++.+.++.|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~  142 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV  142 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            4778889999999999999999999999999999999999999999999999999999887643

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.04  E-value=9.4e-09  Score=89.60  Aligned_cols=274  Identities=12%  Similarity=0.089  Sum_probs=190.2

Q ss_pred             HHHHHHHHHH-CCCCh--HHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 017191           23 VALSTRAALL-QGMNP--RVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFEGLYLAS   99 (375)
Q Consensus        23 ~~~~~k~~~~-~~~~p--~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~   99 (375)
                      ....-.+..+ +++.|  +.+++.++++-..+.+.-+...+.++  +..+   |+....++.+. .....+-+-++.|.+
T Consensus        58 yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~--r~iP---~rtY~~la~~t-~gtmGLsn~SlgYLN  131 (367)
T KOG1582|consen   58 YGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKR--RVIP---WRTYVILAFLT-VGTMGLSNGSLGYLN  131 (367)
T ss_pred             HHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccc--eecc---hhHhhhhHhhh-hhccccCcCcccccc
Confidence            3334443333 45665  45566666554443333222222222  2234   44455555555 556666677777776


Q ss_pred             hhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccccccccCCCCCch
Q 017191          100 SSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEKSFLFRSSGGENW  179 (375)
Q Consensus       100 ~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (375)
                      =..-.++....-+-+.+.+.++-+.|..+.      +.++..+...|.++..+.+..                 ...+.+
T Consensus       132 YPtQviFKccKliPVmiggifIqGkRY~v~------d~~aA~lm~lGli~FTLADs~-----------------~sPNF~  188 (367)
T KOG1582|consen  132 YPTQVIFKCCKLIPVMIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTLADSQ-----------------TSPNFN  188 (367)
T ss_pred             CcHHHHHHhhhhhhhhheeeeeccccccHH------HHHHHHHHHHHHHhhhhcccc-----------------cCCCcc
Confidence            555556777777777888888899998888      999999999999998863332                 233445


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhCC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc---ccchhhHHHHhhhh
Q 017191          180 LLGCLFLFASACCWSLWLILQVPVSASYP-DHLSLSAWMCFLATLQSATFAIFTEPDPEAWNL---HSSLEIFCCFFSGA  255 (375)
Q Consensus       180 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~  255 (375)
                      ..|.+++-.+-++-|+-.-++++..+..+ +.....++....|...++..+..+.+-...|..   .+.......++...
T Consensus       189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~  268 (367)
T KOG1582|consen  189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL  268 (367)
T ss_pred             eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence            68999988888999988888888877655 456667788888888777777766544444532   22223344344443


Q ss_pred             hhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecccccc
Q 017191          256 IGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKDH  326 (375)
Q Consensus       256 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~~~  326 (375)
                       .+.++.......++..|+..+..+....--+++++++++|..++|....-|..+++.|+++..+.|+.+.
T Consensus       269 -~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk~  338 (367)
T KOG1582|consen  269 -AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNKI  338 (367)
T ss_pred             -HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCCC
Confidence             5666666667778999999999999999999999999999999999999999999999999998885443

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.04  E-value=5.9e-09  Score=96.57  Aligned_cols=133  Identities=13%  Similarity=0.141  Sum_probs=105.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHH
Q 017191            7 YKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTI   86 (375)
Q Consensus         7 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   86 (375)
                      ..|.+++++++++|+...+..|... ++.++....+   ....+.+.+........ . ...+...+..++..++.. .+
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~-~~~~~~~~~~---~~~~~~l~~~~~~~~~~-~-~~~~~~~~~~l~~~~~~t-~~  227 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYA-RGKNGITLFF---ILTALALWIKYFLSPQP-A-MVFSLPAIIKLLLAAAAM-GF  227 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcc-CCCCchhHHH---HHHHHHHHHHHHHhcCc-c-ccCCHHHHHHHHHHHHHH-HH
Confidence            4588999999999999999999875 3477765432   22333333333332221 1 235667787777777544 88


Q ss_pred             HHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           87 NQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        87 ~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      ++.+|++++++.+++.++.+.++.|++..++++++++|+++..      +++|.++.+.|+.+...
T Consensus       228 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        228 GYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHhh
Confidence            9999999999999999999999999999999999999999999      99999999999988864

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.03  E-value=9.1e-09  Score=97.27  Aligned_cols=137  Identities=9%  Similarity=0.055  Sum_probs=105.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHCCCCh-HHHHHHHHHHHHHHHHHHHHHhhcc-cc--CCCCCHHHHHHHHHHHHH
Q 017191            7 YKPAMAMLALQFSYAVVALSTRAALLQGMNP-RVFVVYRQAIATLFMAPMAYLSSRK-YK--SSSMGLRSFSLIFFIALL   82 (375)
Q Consensus         7 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p-~~~~~~r~~~~~~~l~~~~~~~~~~-~~--~~~~~~~~~~~~~~~g~~   82 (375)
                      ..|..++++++++|+.+.++.|....+ .++ ...+++...++.+.+.+......+. ..  ....+.. ...++..+++
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~  265 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH
Confidence            448899999999999999999988665 654 4566677766666665555443321 11  0112222 2223444554


Q ss_pred             HHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           83 GVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      . .+++.+|++++++.+++.++++.++.|++++++++++++|++++.      +++|.++.+.|++++..
T Consensus       266 t-~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        266 T-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMW  328 (358)
T ss_pred             H-HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence            4 678999999999999999999999999999999999999999999      99999999999999875

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.98  E-value=1.9e-08  Score=92.70  Aligned_cols=278  Identities=15%  Similarity=0.158  Sum_probs=156.6

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHH-HHHHHHHHHHH
Q 017191            5 RDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRS-FSLIFFIALLG   83 (375)
Q Consensus         5 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~   83 (375)
                      +...|.++.+.++++-+....+.|....+ .+.                       ...+.....++. ....++.|...
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~-----------------------~~~~~~~~~~~~l~~~~W~~G~~~   59 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR-----------------------GSLRAGSGGRSYLRRPLWWIGLLL   59 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-----------------------ccccccchhhHHHhhHHHHHHHHH
Confidence            45679999999999999999888877533 110                       000000001111 12345555666


Q ss_pred             HHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCC
Q 017191           84 VTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEF  163 (375)
Q Consensus        84 ~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~  163 (375)
                      ..++..+.+.|+.+.|++.++.+..+.-++.++++..++|||++++      ++.|..+++.|..++.... |+..+.. 
T Consensus        60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~~~-~~~~~~~-  131 (300)
T PF05653_consen   60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVIFA-PKEEPIH-  131 (300)
T ss_pred             HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEEeC-CCCCCcC-
Confidence            6778888999999999999999999999999999999999999999      9999999999998877543 3211110 


Q ss_pred             CccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHH-------HHHHHHhcCCCC
Q 017191          164 LPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQ-------SATFAIFTEPDP  236 (375)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~-------~~~~~~~~~~~~  236 (375)
                      ..++-..   .-.+............ ++..+.....+|..++  +...........|+..       ...+....+++ 
T Consensus       132 t~~~l~~---~~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~-  204 (300)
T PF05653_consen  132 TLDELIA---LLSQPGFLVYFILVLV-LILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILIKLTFSGD-  204 (300)
T ss_pred             CHHHHHH---HhcCcceehhHHHHHH-HHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHHHHHhcCc-
Confidence            0000000   0000001111111111 1222222222222222  1110000011111110       00111111111 


Q ss_pred             cccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhH-HHHHHHHHHHHHhccc--ccc----hhhhhHH
Q 017191          237 EAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPL-CTVIVTILAALLLHEE--IYT----GSLVGAI  309 (375)
Q Consensus       237 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~-~pv~~~~~~~l~~~e~--~~~----~~~iG~~  309 (375)
                        .....+..|..++.+ +.+........++++++.+++.+.++.+. -...+++-|.++++|.  .+.    ....|..
T Consensus       205 --~~f~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~  281 (300)
T PF05653_consen  205 --NQFTYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFL  281 (300)
T ss_pred             --hhhhhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHH
Confidence              111233344444333 33556667778999999999988876554 4556666678888874  344    3346888


Q ss_pred             HHHhhhhheeecccc
Q 017191          310 GVILGLYAVLWGKAK  324 (375)
Q Consensus       310 lil~g~~l~~~~~~~  324 (375)
                      +++.|+++....|.+
T Consensus       282 ~ii~GV~lL~~~~~~  296 (300)
T PF05653_consen  282 IIIIGVFLLSSSKDK  296 (300)
T ss_pred             HHHHhhheeeccCch
Confidence            899999988765543

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.94  E-value=1.5e-08  Score=81.18  Aligned_cols=123  Identities=18%  Similarity=0.125  Sum_probs=93.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhH
Q 017191          181 LGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGV  260 (375)
Q Consensus       181 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  260 (375)
                      .|.++++.+.++-+...++.|+-.++.+ ....... .    + ...... .          .+   ...+++|++++++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~~-~----~-~~~~~~-~----------~p---~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAWD-F----I-AALLAF-G----------LA---LRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCC-CccchhH-H----H-HHHHHH-h----------cc---HHHHHHHHHHHHH
Confidence            3778889999999999999999887763 2221111 0    0 000111 0          01   1245678889999


Q ss_pred             hHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHH--HhcccccchhhhhHHHHHhhhhheeecccc
Q 017191          261 SFCVQAWCISKRGPLFSAMFNPLCTVIVTILAAL--LLHEEIYTGSLVGAIGVILGLYAVLWGKAK  324 (375)
Q Consensus       261 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l--~~~e~~~~~~~iG~~lil~g~~l~~~~~~~  324 (375)
                      ++.+|.+++++.+.+.+..+....+++..+.++.  ++||++|+.+++|+++|++|+++..+.+++
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~  126 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK  126 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence            9999999999999999999999998888888885  899999999999999999999998765443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.89  E-value=7.3e-08  Score=89.45  Aligned_cols=140  Identities=14%  Similarity=0.199  Sum_probs=108.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHCCCCh--HHHHHHHHHHHHHHHHHHHHHhhcccc----CCCCCHHHHHHHHHHH
Q 017191            7 YKPAMAMLALQFSYAVVALSTRAALLQGMNP--RVFVVYRQAIATLFMAPMAYLSSRKYK----SSSMGLRSFSLIFFIA   80 (375)
Q Consensus         7 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p--~~~~~~r~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~g   80 (375)
                      ..|.+++++++++|+...+..|...+++-++  ....++-.+.+.+.+.......+....    ....+.+.+..++..+
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            4699999999999999999999875331122  233344444444333333222222110    0234678899999999


Q ss_pred             HHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           81 LLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        81 ~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      ++...+++.+|+.++++.+++.++.+..+.|++..++++++++|+++..      +++|.++.+.|+++...
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYINVF  287 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHHhc
Confidence            9998999999999999999999999999999999999999999999999      99999999999988763

>TIGR00803 nst UDP-galactose transporter

Probab=98.86  E-value=2.8e-08  Score=88.07  Aligned_cols=203  Identities=8%  Similarity=0.022  Sum_probs=126.9

Q ss_pred             hhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcc-----------cCcCCCccccc
Q 017191          101 SMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKL-----------LNTEFLPEKSF  169 (375)
Q Consensus       101 ~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~-----------~~~~~~~~~~~  169 (375)
                      .....+.+..++++++..+.+.++|.++.      ++++.++...|++.....+.+..           ...+...    
T Consensus         5 Pa~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~----   74 (222)
T TIGR00803         5 PIHIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSS----   74 (222)
T ss_pred             cchHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCC----
Confidence            34456677889999999998899998888      99999998888876443221110           0000000    


Q ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHH-HHHHHHHHHHHHHHHHHhcCCCC-cccc--cccch
Q 017191          170 LFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSL-SAWMCFLATLQSATFAIFTEPDP-EAWN--LHSSL  245 (375)
Q Consensus       170 ~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~-~~~~--~~~~~  245 (375)
                       ...........|....+.+.++-++..+++++..++.+..... +.....++.+.........+.+. ..+.  ...+.
T Consensus        75 -~~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (222)
T TIGR00803        75 -AKTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPT  153 (222)
T ss_pred             -ccccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCch
Confidence             0001112446777778888888888888888876654212222 12222222221111111111111 0111  01111


Q ss_pred             hhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhe
Q 017191          246 EIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAV  318 (375)
Q Consensus       246 ~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~  318 (375)
                      ..+.    .++...++..+..+.+|+.++...+....++++++.+++++++||+++..+++|+.+++.|++++
T Consensus       154 ~~~~----~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       154 AVWI----VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHH----HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            1112    22345566677889999999999999999999999999999999999999999999999998753

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.81  E-value=4.6e-08  Score=90.96  Aligned_cols=141  Identities=11%  Similarity=0.171  Sum_probs=108.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHC-CCChHHHHHHHHHHHHHHHHHHHHHhhccccCC-C-------CCHHH-HHH
Q 017191            6 DYKPAMAMLALQFSYAVVALSTRAALLQ-GMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSS-S-------MGLRS-FSL   75 (375)
Q Consensus         6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~-~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~-~-------~~~~~-~~~   75 (375)
                      ...|.++.++++++|+...+..|...++ +.+|...+++....+.+.+.|+....+.....+ .       ..... +..
T Consensus       143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            4569999999999999999999988651 489999999999999999998876543211000 0       01011 111


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           76 IFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        76 ~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      .+..+.......+.+++.++++++++.+++...+.|+++.++++++++|+++..      +++|..+.+.|+.+...
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHHH
Confidence            223333232344467778999999999999999999999999999999999999      99999999999999874

specificities overlap.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=98.79  E-value=1.9e-08  Score=87.97  Aligned_cols=237  Identities=13%  Similarity=0.052  Sum_probs=158.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccc-chhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHh
Q 017191           66 SSMGLRSFSLIFFIALLGVTINQNTYFEGLYLA-SSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCV  144 (375)
Q Consensus        66 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~-~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~  144 (375)
                      ++.+.|++....   . .....+.+-++++++- +...=.++..-.++.++++++++.|+|.+.+      |+.++.+.-
T Consensus        60 ~kiplk~Y~i~V---~-mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~------Qy~Sv~~iT  129 (330)
T KOG1583|consen   60 PKIPLKDYAITV---A-MFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLR------QYSSVLMIT  129 (330)
T ss_pred             CCCchhhhheeh---h-eeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehh------hhhhHHhhh
Confidence            556666654332   2 2256777788888876 4445556678899999999999999999999      999999999


Q ss_pred             hhHhHHhhhcCCcccC-cCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-cHHHHHHHHHHHHH
Q 017191          145 GGAISMALLRGPKLLN-TEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYP-DHLSLSAWMCFLAT  222 (375)
Q Consensus       145 ~Gv~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~  222 (375)
                      +|+++..+.+.+.... .+..+   .++...+...|..|+.+...+.+.-|...+.++..-+++. ++-+..++.-.++.
T Consensus       130 iGiiIcTl~s~~d~~~~~~~l~---~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsL  206 (330)
T KOG1583|consen  130 IGIIICTLFSSKDGRSKLSGLD---SGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSL  206 (330)
T ss_pred             hhheeEEeecCcchhhhhcccc---cCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhcc
Confidence            9999988654443332 11111   1111233445789999988899988888888887766654 56677777666543


Q ss_pred             HHHHHHHHhcCCC------------Cccccc---ccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHH
Q 017191          223 LQSATFAIFTEPD------------PEAWNL---HSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVI  287 (375)
Q Consensus       223 i~~~~~~~~~~~~------------~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~  287 (375)
                      -    ..++...+            ....+.   .-+..|..+++-.+ ....+.-..+..-...++..+++...+.-.+
T Consensus       207 P----~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L-~Qy~CikgVy~L~te~~sLTVTlvltlRKFv  281 (330)
T KOG1583|consen  207 P----LFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVL-TQYFCIKGVYILTTETSSLTVTLVLTLRKFV  281 (330)
T ss_pred             c----hHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHH-HHHHHHHhhhhhhceecceEEEEeeeHHHHH
Confidence            2    22222111            000111   12334444443333 2222222233345566777889999999999


Q ss_pred             HHHHHHHHhcccccchhhhhHHHHHhhhhheee
Q 017191          288 VTILAALLLHEEIYTGSLVGAIGVILGLYAVLW  320 (375)
Q Consensus       288 ~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~  320 (375)
                      +.++|.+.|+..++++.|+|.+++..|.+++..
T Consensus       282 SLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  282 SLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             HHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999888743

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.79  E-value=2.4e-08  Score=78.65  Aligned_cols=108  Identities=12%  Similarity=0.269  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHH
Q 017191          216 WMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALL  295 (375)
Q Consensus       216 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~  295 (375)
                      ++...+.+..........+-...++......+..++..|+++...++.++.++.++.+ ..++.+..++|+++.+++.++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH
Confidence            4455555555555544322111122222345556666677667789999999999999 588899999999999999999


Q ss_pred             hcccccchhhhhHHHHHhhhhheeecccc
Q 017191          296 LHEEIYTGSLVGAIGVILGLYAVLWGKAK  324 (375)
Q Consensus       296 ~~e~~~~~~~iG~~lil~g~~l~~~~~~~  324 (375)
                      ++|+++..+++|++++++|+++..+.+.+
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            99999999999999999999998876543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.78  E-value=1.4e-09  Score=93.61  Aligned_cols=278  Identities=16%  Similarity=0.146  Sum_probs=187.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017191            9 PAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQ   88 (375)
Q Consensus         9 g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   88 (375)
                      .++.+++-++.||+.+.+....   +-.|.+.+.-- .++++++....++..+    |..+.+.+..-++.|.+. ..++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGt-T~GALifaiiv~~~~~----p~~T~~~~iv~~isG~~W-s~GQ   73 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGT-TLGALIFAIIVFLFVS----PELTLTIFIVGFISGAFW-SFGQ   73 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec---CCChhHhhhhc-cHHHHHHHHHHheeec----CccchhhHHHHHHhhhHh-hhhh
Confidence            5778899999999998887644   35676665543 3444444444444433    567888888888889888 8999


Q ss_pred             HHHHhhhcccchhhHhhhh-hhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCcCCCccc
Q 017191           89 NTYFEGLYLASSSMASAMG-NLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNTEFLPEK  167 (375)
Q Consensus        89 ~~~~~al~~~~~~~a~~l~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~  167 (375)
                      ...+.|+++.+++.+..+. .++-+-+.+++++.++|..+..  .-....+++++.++|+.+....+..  ++.      
T Consensus        74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~--~~IlG~iAliliviG~~lTs~~~~~--nk~------  143 (288)
T COG4975          74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPT--QIILGFIALILIVIGIYLTSKQDRN--NKE------  143 (288)
T ss_pred             hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcch--hHHHHHHHHHHHHHhheEeeeeccc--ccc------
Confidence            9999999999999999995 6999999999999999998877  1111224455555666655531111  000      


Q ss_pred             cccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhh
Q 017191          168 SFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEI  247 (375)
Q Consensus       168 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  247 (375)
                           .++.++.-.|....+.+.+.|-.|.++.+...  . |..+...-+..-..+....+....+ +. ..   ....|
T Consensus       144 -----~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v-~g~saiLPqAiGMv~~ali~~~~~~-~~-~~---~K~t~  210 (288)
T COG4975         144 -----EENPSNLKKGIVILLISTLGYVGYVVLFQLFD--V-DGLSAILPQAIGMVIGALILGFFKM-EK-RF---NKYTW  210 (288)
T ss_pred             -----ccChHhhhhheeeeeeeccceeeeEeeecccc--c-cchhhhhHHHHHHHHHHHHHhhccc-cc-ch---HHHHH
Confidence                 13444567899899999999999999888654  3 3344433333322222222222211 11 11   11222


Q ss_pred             HHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhh----hhHHHHHhhhhheee
Q 017191          248 FCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSL----VGAIGVILGLYAVLW  320 (375)
Q Consensus       248 ~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~----iG~~lil~g~~l~~~  320 (375)
                      .. +..|+ .=+++...+.++.++.|.+..=.+..+..+++.+-+.++++|+=|..++    +|+++++.|..+.-.
T Consensus       211 ~n-ii~G~-~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~  285 (288)
T COG4975         211 LN-IIPGL-IWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI  285 (288)
T ss_pred             HH-HhhHH-HHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence            22 23344 3456777788888888888777788888999999999999999888765    688888888776544

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.78  E-value=2.1e-07  Score=77.29  Aligned_cols=135  Identities=21%  Similarity=0.242  Sum_probs=115.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHC------CCChHHHHHHHHHHHHHHHHHHHHHhhccccCC-----CC-----CHHH
Q 017191            9 PAMAMLALQFSYAVVALSTRAALLQ------GMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSS-----SM-----GLRS   72 (375)
Q Consensus         9 g~l~~l~~~~~~~~~~~~~k~~~~~------~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~-----~~-----~~~~   72 (375)
                      |.++++.+.++.+...+..|..+++      +.++..+..+....+.+++.+.....+.....+     ..     ..+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            5678999999999999999998876      689999999999999999999887766543100     00     2345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHH
Q 017191           73 FSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISM  150 (375)
Q Consensus        73 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~  150 (375)
                      +..++..|++. ...+.+.+..++++++...++......+++.++++++++|+++..      +++|+.+++.|+++-
T Consensus        81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhee
Confidence            66666777777 889999999999999999999999999999999999999999999      999999999998753

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.65  E-value=1.2e-06  Score=83.15  Aligned_cols=140  Identities=11%  Similarity=0.120  Sum_probs=102.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHC------CCChHHHHHHHHHHHHHHHHHHHHHhhccc-cC---------CCCC
Q 017191            6 DYKPAMAMLALQFSYAVVALSTRAALLQ------GMNPRVFVVYRQAIATLFMAPMAYLSSRKY-KS---------SSMG   69 (375)
Q Consensus         6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~------~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~-~~---------~~~~   69 (375)
                      ...|.+++++++++|+...++.|..+++      ..++.....+-..++.++++|+....+... ..         ....
T Consensus       192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~  271 (350)
T PTZ00343        192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT  271 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence            4579999999999999999999998753      255666666667888888888876432210 00         0001


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhH
Q 017191           70 LRSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAIS  149 (375)
Q Consensus        70 ~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l  149 (375)
                      .......++.+.+...+.+.+.+++++++++...++...+.|+++.++++++++|+++..      +++|.++.+.|+++
T Consensus       272 ~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~------~~iG~~lii~Gv~l  345 (350)
T PTZ00343        272 KGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL------GYLGMAVAILGALL  345 (350)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH------hHHHHHHHHHHHHH
Confidence            111111222222222444444557999999999999999999999999999999999999      99999999999988


Q ss_pred             Hh
Q 017191          150 MA  151 (375)
Q Consensus       150 ~~  151 (375)
                      ..
T Consensus       346 Ys  347 (350)
T PTZ00343        346 YS  347 (350)
T ss_pred             Hh
Confidence            65

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.56  E-value=2.6e-06  Score=78.17  Aligned_cols=134  Identities=15%  Similarity=0.239  Sum_probs=107.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHH-HHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191            7 YKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVV-YRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT   85 (375)
Q Consensus         7 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~-~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   85 (375)
                      ..|.++.+++++.|+...+..|...  ..++..... +..........+..  .....  .....+.+......|++...
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~g~~~~~  226 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLFF--LSGFG--APILSRAWLLLLYLGVFSTG  226 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHH--hcccc--ccCCHHHHHHHHHHHHHHHH
Confidence            4799999999999999999999775  366766666 33332222222221  11111  13467889999999999966


Q ss_pred             HHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           86 INQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        86 ~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      .++.+++++++..+++.++.+..+.|++..++++++++|+++..      +++|..+.+.|+.+...
T Consensus       227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~~~  287 (292)
T COG0697         227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLASL  287 (292)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHhc
Confidence            89999999999999999999999999999999999999999999      99999999999988873

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.55  E-value=1.9e-06  Score=79.47  Aligned_cols=129  Identities=15%  Similarity=0.106  Sum_probs=103.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHH---HHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHH
Q 017191            7 YKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQA---IATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLG   83 (375)
Q Consensus         7 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   83 (375)
                      .+|+++.+++++.++......|..   +.+|...++....   ++..++....  + +. + +. ..+.....++.|++.
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~--~-~~-~-~~-~~~~~~~~~~~Gi~~  221 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH--I-LA-K-PL-KKYAILLNILPGLMW  221 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH--h-cc-c-ch-HHHHHHHHHHHHHHH
Confidence            689999999999999999999965   3888888555544   3333333222  1 11 1 32 334445556688885


Q ss_pred             HHHHHHHHHhhhc-ccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhh----hhHHHHhhhHhHHh
Q 017191           84 VTINQNTYFEGLY-LASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKI----LGTIFCVGGAISMA  151 (375)
Q Consensus        84 ~~~~~~~~~~al~-~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~----~g~~l~~~Gv~l~~  151 (375)
                       .+++.+|+.+.+ +.+++.++++.+..|+...+++++++||+.+++      ++    +|.++.+.|+.++.
T Consensus       222 -~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       222 -GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG  287 (290)
T ss_pred             -HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence             999999999999 999999999999999999999999999999999      99    99999999998875

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.53  E-value=2e-06  Score=67.10  Aligned_cols=69  Identities=17%  Similarity=0.132  Sum_probs=63.4

Q ss_pred             HHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHh
Q 017191           77 FFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMA  151 (375)
Q Consensus        77 ~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~  151 (375)
                      ...+++++.+++.++..+++..|.+.+..+.++.++++.+++++++|||++++      +++|+.+.+.|++++.
T Consensus        40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence            34444666889999999999999999999999999999999999999999999      9999999999998875

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.52  E-value=4.4e-07  Score=70.88  Aligned_cols=67  Identities=18%  Similarity=0.105  Sum_probs=61.8

Q ss_pred             hhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhee
Q 017191          253 SGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVL  319 (375)
Q Consensus       253 ~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~  319 (375)
                      .++++.++++.++.+++++.+.+++-.+.++.++++.+.+++++||+++..+++|.+++++|+++..
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            4445778899999999999999999999999999999999999999999999999999999988754

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.47  E-value=3.7e-06  Score=67.34  Aligned_cols=118  Identities=19%  Similarity=0.108  Sum_probs=91.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHH
Q 017191            8 KPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTIN   87 (375)
Q Consensus         8 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   87 (375)
                      .++++++++.++-+...++.|..+++ .+....... . ...+.  ..       .        .....+..|++.++++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~~~~~--~~-------~--------~p~~~i~lgl~~~~la   61 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-IAALL--AF-------G--------LALRAVLLGLAGYALS   61 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-HHHHH--HH-------h--------ccHHHHHHHHHHHHHH
Confidence            37888899999999999999999765 444332211 1 00000  00       0        0112577888888999


Q ss_pred             HHHHHhhhcccchhhHhhhhhhhHHHHHHHHHH--hhccccCCCccchhhhhhhHHHHhhhHhHHh
Q 017191           88 QNTYFEGLYLASSSMASAMGNLIPAITFVMASI--VGLEKIDLGSVRSVAKILGTIFCVGGAISMA  151 (375)
Q Consensus        88 ~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l--~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~  151 (375)
                      +.++.+++++.+++.+..+....++++.+.++.  +++|++++.      +++|+.+.++|+.++.
T Consensus        62 ~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~  121 (129)
T PRK02971         62 MLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhc
Confidence            999999999999999999999999888888885  799999999      9999999999999987

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.43  E-value=1.9e-06  Score=76.72  Aligned_cols=139  Identities=12%  Similarity=0.126  Sum_probs=113.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccc-cccchhhHHHHhhhhhhh
Q 017191          180 LLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWN-LHSSLEIFCCFFSGAIGS  258 (375)
Q Consensus       180 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~  258 (375)
                      ..|.++++.+-+.|+..-.+.|-+ +.. ++..+..++...+......+.....+....++ ...+..+..+...++ -.
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~-~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~-li   82 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLL-EPL-PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTAL-LI   82 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHH-ccC-CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHH-HH
Confidence            469999999999999999998854 555 58899999999988877766665533322222 234556666666666 46


Q ss_pred             hHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeec
Q 017191          259 GVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWG  321 (375)
Q Consensus       259 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~  321 (375)
                      ....++|.++.++....++|.-.+.+|.+.+++|.++++|+++..|++..++..+|+....+.
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            688999999999999999999999999999999999999999999999999999998887653

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.31  E-value=1.5e-05  Score=74.23  Aligned_cols=142  Identities=12%  Similarity=-0.053  Sum_probs=112.5

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhcccc-CCCCCHHHHHHHHHHHHH
Q 017191            4 LRDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYK-SSSMGLRSFSLIFFIALL   82 (375)
Q Consensus         4 ~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~   82 (375)
                      .+..+|-++++++++++|.+.++-+..+.+ .++.++..+-.+.+.++..+.....+++.. ....+.+.....+..++.
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~  242 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALC  242 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHH
Confidence            356899999999999999999999998855 888888888888888888877766555443 123455555444444444


Q ss_pred             HHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhh
Q 017191           83 GVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALL  153 (375)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~  153 (375)
                      . ...+.+.-..+++.+++...+=.-+..++..+++.+++++++++.      .++|.++.++|.++....
T Consensus       243 l-f~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~~  306 (334)
T PF06027_consen  243 L-FLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNLA  306 (334)
T ss_pred             H-HHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEcc
Confidence            4 556666677888999987777778889999999999999999999      999999999999998753

Some of the sequences in this family are annotated as putative membrane proteins.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.25  E-value=1.9e-05  Score=68.74  Aligned_cols=134  Identities=14%  Similarity=0.070  Sum_probs=114.4

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHH
Q 017191            5 RDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGV   84 (375)
Q Consensus         5 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   84 (375)
                      -+..|..+.+.+..+|+.+.+..|..-. ..+--.-+..-+.++.++.+|+.......   ...++......+..++++.
T Consensus       145 lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~-~~~g~~g~a~gm~vAaviv~Pig~~~ag~---~l~~p~ll~laLgvavlSS  220 (292)
T COG5006         145 LDPVGVALALGAGACWALYIVLGQRAGR-AEHGTAGVAVGMLVAALIVLPIGAAQAGP---ALFSPSLLPLALGVAVLSS  220 (292)
T ss_pred             CCHHHHHHHHHHhHHHHHHHHHcchhcc-cCCCchHHHHHHHHHHHHHhhhhhhhcch---hhcChHHHHHHHHHHHHhc
Confidence            3678999999999999999999998753 35556667788899999999987543322   2346677788888999999


Q ss_pred             HHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHh
Q 017191           85 TINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAI  148 (375)
Q Consensus        85 ~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~  148 (375)
                      .+.+.+--.+++..+...-+++.++.|.+.++.++++++|+++..      ||.++...+.+.+
T Consensus       221 alPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsa  278 (292)
T COG5006         221 ALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASA  278 (292)
T ss_pred             ccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999      9999988877655

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.21  E-value=3.2e-06  Score=76.13  Aligned_cols=277  Identities=15%  Similarity=0.196  Sum_probs=160.3

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHH
Q 017191            5 RDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGV   84 (375)
Q Consensus         5 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   84 (375)
                      +..+|.++.+.+.+.-|.+..+-|....+           ...        .-.|-.+.  +....++  +.+..|++.+
T Consensus        18 d~~~G~~LaissS~~Ig~sfilkKkgl~r-----------~~~--------~~~ra~~g--g~~yl~~--~~Ww~G~ltm   74 (335)
T KOG2922|consen   18 DNIIGLVLAISSSIFIGSSFILKKKGLKR-----------AGA--------SGLRAGEG--GYGYLKE--PLWWAGMLTM   74 (335)
T ss_pred             CceeeeeehhhccEEEeeehhhhHHHHHH-----------Hhh--------hcccccCC--Ccchhhh--HHHHHHHHHH
Confidence            34567777777888888888877766543           100        00011111  1112233  5567788888


Q ss_pred             HHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCc-CC
Q 017191           85 TINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNT-EF  163 (375)
Q Consensus        85 ~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~-~~  163 (375)
                      .++...-|.|..+.|++.++.+..+..++.++++..+++||+++.      ..+|..++++|-.+++.. .|+..+. +.
T Consensus        75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~h-aP~e~~i~t~  147 (335)
T KOG2922|consen   75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVIH-APKEQEIESV  147 (335)
T ss_pred             HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEEe-cCcccccccH
Confidence            899999999999999999999999999999999999999999999      999999999998888753 2321111 00


Q ss_pred             CccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHH-H----HHH--HhcCCCC
Q 017191          164 LPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQS-A----TFA--IFTEPDP  236 (375)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~-~----~~~--~~~~~~~  236 (375)
                      ++.  .   .--.+...+.....++..++.=++.+.-|+ .+.  +.+.........|.... .    ..+  ....++.
T Consensus       148 ~el--~---~~~~~~~Fliy~~~iil~~~il~~~~~p~~-g~t--nilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~  219 (335)
T KOG2922|consen  148 EEV--W---ELATEPGFLVYVIIIILIVLILIFFYAPRY-GQT--NILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNN  219 (335)
T ss_pred             HHH--H---HHhcCccHHHHHHHHHHHHHHHheeecccc-ccc--ceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCc
Confidence            000  0   000000112222222222222222221111 111  22222222222221110 0    011  1111111


Q ss_pred             cccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhh-HHHHHHHHHHHHHhcccc--cc----hhhhhHH
Q 017191          237 EAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNP-LCTVIVTILAALLLHEEI--YT----GSLVGAI  309 (375)
Q Consensus       237 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~-~~pv~~~~~~~l~~~e~~--~~----~~~iG~~  309 (375)
                         +...+..|..++.... +...-..-.++|++..+++.++.+.+ .-..++++-|.++|+|--  +.    ..+.|..
T Consensus       220 ---ql~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~  295 (335)
T KOG2922|consen  220 ---QLFYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFV  295 (335)
T ss_pred             ---ccccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHH
Confidence               1223345555444444 44455556789999999998887654 456777788999999843  33    3457888


Q ss_pred             HHHhhhhheeeccc
Q 017191          310 GVILGLYAVLWGKA  323 (375)
Q Consensus       310 lil~g~~l~~~~~~  323 (375)
                      .++.|+++....|.
T Consensus       296 ti~~G~flL~~~kd  309 (335)
T KOG2922|consen  296 TIFLGIFLLHRTKD  309 (335)
T ss_pred             HhhheeeEeeeecc
Confidence            99999998855444

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.11  E-value=7.6e-06  Score=64.31  Aligned_cols=70  Identities=13%  Similarity=0.242  Sum_probs=60.0

Q ss_pred             hhhhhhHhHHHHHHHhccCCcchhhh-hhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccc
Q 017191          254 GAIGSGVSFCVQAWCISKRGPLFSAM-FNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKA  323 (375)
Q Consensus       254 g~~~~~~~~~~~~~a~~~~~~~~~s~-~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~  323 (375)
                      .+++.+++++++.+++|+++...+=. ...+..+.+.+.+++++||++++.+++|++++++|++......+
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            44467889999999999999875544 46789999999999999999999999999999999998865544

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.89  E-value=0.00034  Score=56.81  Aligned_cols=132  Identities=9%  Similarity=0.035  Sum_probs=99.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHh
Q 017191          182 GCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVS  261 (375)
Q Consensus       182 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  261 (375)
                      ..+++++++++-++......++.++..++...+++.+..+.+.+........+.  .+.......|+..  +|-+.+.+.
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~--lGG~lG~~~   77 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAY--LGGLLGVFF   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHh--ccHHHHHHH
Confidence            356788899999999999999888875699999999999999988888776543  2222223344442  344456677


Q ss_pred             HHHHHHHhccCCcchhhhh-hhHHHHHHHHHHHH----HhcccccchhhhhHHHHHhhhhh
Q 017191          262 FCVQAWCISKRGPLFSAMF-NPLCTVIVTILAAL----LLHEEIYTGSLVGAIGVILGLYA  317 (375)
Q Consensus       262 ~~~~~~a~~~~~~~~~s~~-~~~~pv~~~~~~~l----~~~e~~~~~~~iG~~lil~g~~l  317 (375)
                      ..+..+..++.|++....+ ..-+.+.+.++|.+    .-++++++.+++|.+++++|+++
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            7788899999999866664 56677777888885    23467899999999999999864

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.80  E-value=0.00062  Score=63.28  Aligned_cols=138  Identities=12%  Similarity=0.150  Sum_probs=113.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-CCCChHHHHHHHHHHHHHHHHHHHHH--hhcccc---CCCCCHHHHHHHHHHHH
Q 017191            8 KPAMAMLALQFSYAVVALSTRAALL-QGMNPRVFVVYRQAIATLFMAPMAYL--SSRKYK---SSSMGLRSFSLIFFIAL   81 (375)
Q Consensus         8 ~g~l~~l~~~~~~~~~~~~~k~~~~-~~~~p~~~~~~r~~~~~~~l~~~~~~--~~~~~~---~~~~~~~~~~~~~~~g~   81 (375)
                      .|+++++++.++-|......+..++ .+.++.+..++-...+.++..+....  .+....   ....++..+..++...+
T Consensus       154 ~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~  233 (303)
T PF08449_consen  154 LGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL  233 (303)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH
Confidence            3999999999999999999999985 56889999999999998888877665  221111   01123345666677777


Q ss_pred             HHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           82 LGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        82 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      .+ ..++.+.+...+..++...+++..+--+++.+++.+++++++++.      +|+|+.+.+.|..+-..
T Consensus       234 ~~-~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~------~~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  234 TG-ALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPL------QWIGIVLVFAGIFLYSY  297 (303)
T ss_pred             HH-HHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChH------HHHHHHHhHHHHHHHHH
Confidence            77 777778888899999999999999999999999999999999999      99999999999998874

; GO: 0055085 transmembrane transport

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.80  E-value=0.00018  Score=55.76  Aligned_cols=69  Identities=13%  Similarity=0.168  Sum_probs=58.9

Q ss_pred             hhhhhhHhHHHHHHHhccCCcchh-hhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecc
Q 017191          254 GAIGSGVSFCVQAWCISKRGPLFS-AMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGK  322 (375)
Q Consensus       254 g~~~~~~~~~~~~~a~~~~~~~~~-s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~  322 (375)
                      .+++.++++.++..++|+++...+ ++...+..+.+.+.++++++|++++.+++|++++++|++......
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            344677889999999999998754 444678899999999999999999999999999999999986544

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.78  E-value=0.00015  Score=66.92  Aligned_cols=121  Identities=19%  Similarity=0.171  Sum_probs=88.1

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhh
Q 017191          177 ENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAI  256 (375)
Q Consensus       177 ~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  256 (375)
                      ..+..|..++++++++.+....++|+...+.+ ......-.   .     ....        +  ..+..|.     |++
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~-~~~~~~~~---~-----~~~~--------l--~~~~W~~-----G~~   58 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLP-RGSLRAGS---G-----GRSY--------L--RRPLWWI-----GLL   58 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccccccc---h-----hhHH--------H--hhHHHHH-----HHH
Confidence            34678999999999999999999998766642 10000000   0     0000        0  0112222     333


Q ss_pred             hhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeec
Q 017191          257 GSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWG  321 (375)
Q Consensus       257 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~  321 (375)
                      ...++..+...++...+.+.++++..+..++..+++..+++|+++..+++|+++++.|..+....
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~  123 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF  123 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence            34455567778899999999999999999999999999999999999999999999998876543

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.74  E-value=0.001  Score=54.14  Aligned_cols=139  Identities=11%  Similarity=0.055  Sum_probs=100.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhh
Q 017191          180 LLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSG  259 (375)
Q Consensus       180 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  259 (375)
                      .+..+.+++++++-.+......++.+..++|...+++.+..|.+.+..+.+..++.. .+.......|+..+. |+ .+.
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~-~~a~~~~~pwW~~~G-G~-lGa   80 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHP-GLAAVASAPWWAWIG-GL-LGA   80 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCC-chhhccCCchHHHHc-cc-hhh
Confidence            456788899999999999999988888877999999999999999888888754432 232223334444222 33 344


Q ss_pred             HhHHHHHHHhccCCcc-hhhhhhhHHHHHHHHHHHHHhc----ccccchhhhhHHHHHhhhhheeec
Q 017191          260 VSFCVQAWCISKRGPL-FSAMFNPLCTVIVTILAALLLH----EEIYTGSLVGAIGVILGLYAVLWG  321 (375)
Q Consensus       260 ~~~~~~~~a~~~~~~~-~~s~~~~~~pv~~~~~~~l~~~----e~~~~~~~iG~~lil~g~~l~~~~  321 (375)
                      +--+.......+.|++ .......-+.+.+.++|.+=+.    .+++..+++|++++++|+++..+.
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            4444556677788876 4555677788888888887654    578999999999999996665443

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.71  E-value=0.00062  Score=61.14  Aligned_cols=116  Identities=17%  Similarity=0.059  Sum_probs=88.5

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHH
Q 017191            5 RDYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGV   84 (375)
Q Consensus         5 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   84 (375)
                      +..++++.++++++.+..+..+.|..   +++|....+=. .++.++-..+.....++    ....|...+-++.|++. 
T Consensus       135 ~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPq-aiGm~i~a~i~~~~~~~----~~~~k~~~~nil~G~~w-  205 (269)
T PF06800_consen  135 NMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQ-AIGMLIGAFIFNLFSKK----PFFEKKSWKNILTGLIW-  205 (269)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHH-HHHHHHHHHHHhhcccc----cccccchHHhhHHHHHH-
Confidence            34679999999999999999998864   47887776644 34333333333222221    12334455557788888 


Q ss_pred             HHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCC
Q 017191           85 TINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLG  129 (375)
Q Consensus        85 ~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~  129 (375)
                      ..++.+++.+.+..+.+.+-.+..+.+++..+.+.+++||+-+++
T Consensus       206 ~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k  250 (269)
T PF06800_consen  206 GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK  250 (269)
T ss_pred             HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence            899999999999999999999999999999999999999998888

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=97.68  E-value=0.018  Score=53.09  Aligned_cols=302  Identities=13%  Similarity=0.076  Sum_probs=180.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHH-Hhhcccc--CCCCCHHHHHHHHHHHHH
Q 017191            6 DYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAY-LSSRKYK--SSSMGLRSFSLIFFIALL   82 (375)
Q Consensus         6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~-~~~~~~~--~~~~~~~~~~~~~~~g~~   82 (375)
                      -..|+++..+..++-|+..+-.|..  ++.+-...=....+++.+++=.+.- +.-....  ....+........+.|++
T Consensus         5 ii~Gii~h~iGg~~~~sfy~P~kkv--k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~l   82 (344)
T PF06379_consen    5 IILGIIFHAIGGFASGSFYVPFKKV--KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVL   82 (344)
T ss_pred             HHHHHHHHHHHHHHhhhhccchhhc--CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHH
Confidence            4678999999999999999888877  4455544444444555444333221 1111110  122345567777888888


Q ss_pred             HHHHHHHHHHhhhcccchhhHhhh-hhhhHHHHHHHHHHhhcccc-CCCccchhhhhhhHHHHhhhHhHHhhhcCCcccC
Q 017191           83 GVTINQNTYFEGLYLASSSMASAM-GNLIPAITFVMASIVGLEKI-DLGSVRSVAKILGTIFCVGGAISMALLRGPKLLN  160 (375)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~a~~l-~~~~pi~~~ll~~l~~~e~~-~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~  160 (375)
                      . .++...|-.+++|++.+...-+ ..+.-++-.++-.++.++-- -..++-+...++|++++++|+++...-+..   +
T Consensus        83 W-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~---K  158 (344)
T PF06379_consen   83 W-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSM---K  158 (344)
T ss_pred             H-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHh---h
Confidence            8 8999999999999999877654 56777777777666644310 011233445899999999999999742111   1


Q ss_pred             cCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhh--------hhCC---cHHHHHHHHHHHHHHHHHHHH
Q 017191          161 TEFLPEKSFLFRSSGGENWLLGCLFLFASACCWSLWLILQVPVS--------ASYP---DHLSLSAWMCFLATLQSATFA  229 (375)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~--------~~~~---~~~~~~~~~~~~~~i~~~~~~  229 (375)
                      +..+.      .+..+.+..+|.++++++++.-|.+++-...-.        ...+   .........+.-|.+.-...+
T Consensus       159 e~~~~------~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc  232 (344)
T PF06379_consen  159 EKELG------EEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYC  232 (344)
T ss_pred             hhhhc------cchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHH
Confidence            11111      112345567999999999998888877655321        0011   011122233344444444454


Q ss_pred             Hhc---CCCCc---cccc---ccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcc----hhhhhhhHHHHHHHHHHHHHh
Q 017191          230 IFT---EPDPE---AWNL---HSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPL----FSAMFNPLCTVIVTILAALLL  296 (375)
Q Consensus       230 ~~~---~~~~~---~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~----~~s~~~~~~pv~~~~~~~l~~  296 (375)
                      ++.   .++..   +...   ....++...+..|+ .=...++.|..+-.+.+..    --.+.+.+..+++-+.+.+ +
T Consensus       233 ~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~-lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-l  310 (344)
T PF06379_consen  233 LILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGV-LWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-L  310 (344)
T ss_pred             HHHHhhcCCCccccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-H
Confidence            432   12221   1111   11234444455555 4556777788887777743    3445678888888888886 4


Q ss_pred             ccc------ccchhhhhHHHHHhhhhheeec
Q 017191          297 HEE------IYTGSLVGAIGVILGLYAVLWG  321 (375)
Q Consensus       297 ~e~------~~~~~~iG~~lil~g~~l~~~~  321 (375)
                      +|-      .-..-++|+++++.++.++-++
T Consensus       311 kEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G  341 (344)
T PF06379_consen  311 KEWKGASKKTIRVLVLGIAVLILSVVIVGYG  341 (344)
T ss_pred             HHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence            773      2233467888888887776443

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.66  E-value=0.00078  Score=52.07  Aligned_cols=65  Identities=17%  Similarity=0.170  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHHhhhcccchhhHhhh-hhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHh
Q 017191           81 LLGVTINQNTYFEGLYLASSSMASAM-GNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMA  151 (375)
Q Consensus        81 ~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~  151 (375)
                      +.++..++.+...++++.|.+.+-.+ ....-+.+.+++++++||++++.      +++|+.+.+.|++.+-
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhc
Confidence            33447888999999999999988766 46888999999999999999999      9999999999998763

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.62  E-value=0.00017  Score=54.80  Aligned_cols=66  Identities=20%  Similarity=0.297  Sum_probs=58.7

Q ss_pred             hhhhHhHHHHHHHhccCCcc-hhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeec
Q 017191          256 IGSGVSFCVQAWCISKRGPL-FSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWG  321 (375)
Q Consensus       256 ~~~~~~~~~~~~a~~~~~~~-~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~  321 (375)
                      ++..++|.+...++|+++.. -.++..-...+.+.+.++++|+|+++..+++|..++++|++.....
T Consensus        38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            35678999999999999986 5677888999999999999999999999999999999999887654

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.60  E-value=0.0007  Score=52.32  Aligned_cols=64  Identities=8%  Similarity=0.104  Sum_probs=56.9

Q ss_pred             hhhhHhHHHHHHHhccCCcc-hhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhee
Q 017191          256 IGSGVSFCVQAWCISKRGPL-FSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVL  319 (375)
Q Consensus       256 ~~~~~~~~~~~~a~~~~~~~-~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~  319 (375)
                      ++..+++++...++|+++.. ..++..-...+.+.+.+++++||++++.+++|++++++|++...
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            35678999999999999986 45667888999999999999999999999999999999998764

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.52  E-value=0.00031  Score=53.93  Aligned_cols=66  Identities=18%  Similarity=0.206  Sum_probs=58.3

Q ss_pred             hhhhhHhHHHHHHHhccCCcc-hhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheee
Q 017191          255 AIGSGVSFCVQAWCISKRGPL-FSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLW  320 (375)
Q Consensus       255 ~~~~~~~~~~~~~a~~~~~~~-~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~  320 (375)
                      +++.++++++...++|+++.. ..++..-+..+.+.+.|++++||++++.+++|+.++++|++....
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            446788999999999999986 556778899999999999999999999999999999999988753

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.49  E-value=0.00037  Score=53.96  Aligned_cols=110  Identities=17%  Similarity=0.131  Sum_probs=77.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 017191           14 LALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQNTYFE   93 (375)
Q Consensus        14 l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   93 (375)
                      ++..++||...++.|..... .++..-.. +..-....     +++         +++   +.+ .=+++ -.+...|++
T Consensus         2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~-----Ll~---------n~~---y~i-pf~lN-q~GSv~f~~   60 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF-----LLL---------NPK---YII-PFLLN-QSGSVLFFL   60 (113)
T ss_pred             eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH-----HHH---------hHH---HHH-HHHHH-HHHHHHHHH
Confidence            45689999999999998653 54444331 21111111     000         222   222 22334 577788999


Q ss_pred             hhcccchhhHhhh-hhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHH
Q 017191           94 GLYLASSSMASAM-GNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISM  150 (375)
Q Consensus        94 al~~~~~~~a~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~  150 (375)
                      .+...+.+.+..+ +++.=++|++.++++.+|..+++      .++|+.+.+.|+.+.
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeeee
Confidence            9999999999998 57899999999988888888888      999999999998764

Many members are annotated as potential transmembrane proteins.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.44  E-value=9.5e-05  Score=64.96  Aligned_cols=137  Identities=15%  Similarity=0.042  Sum_probs=109.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191            6 DYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT   85 (375)
Q Consensus         6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   85 (375)
                      +..+.+..+.+++.-+...++.|..- +..+....+.+-.+++.+.-...+..-+...  ....+|+|+.+..+|+++ .
T Consensus       189 ~~~gt~aai~s~lf~asvyIilR~iG-k~~h~~msvsyf~~i~lV~s~I~~~~ig~~~--lP~cgkdr~l~~~lGvfg-f  264 (346)
T KOG4510|consen  189 DIPGTVAAISSVLFGASVYIILRYIG-KNAHAIMSVSYFSLITLVVSLIGCASIGAVQ--LPHCGKDRWLFVNLGVFG-F  264 (346)
T ss_pred             cCCchHHHHHhHhhhhhHHHHHHHhh-ccccEEEEehHHHHHHHHHHHHHHhhcccee--cCccccceEEEEEehhhh-h
Confidence            34567788888888888888888663 4477766666666676666555544333222  335788999999999999 8


Q ss_pred             HHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           86 INQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        86 ~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      +++.+...|+|.--++-++++.++..++..++..+|+++.++++      .|.|+++.+...+.+..
T Consensus       265 igQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~w------s~~Ga~~vvsS~v~~a~  325 (346)
T KOG4510|consen  265 IGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIW------SWVGAVMVVSSTVWVAL  325 (346)
T ss_pred             HHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHH------HhhceeeeehhHHHHHH
Confidence            99999999999999999999999999999999999999999999      99998877776666654

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.43  E-value=0.0011  Score=52.16  Aligned_cols=68  Identities=15%  Similarity=0.083  Sum_probs=61.0

Q ss_pred             HHHHHHHHHHHHHHhhhcccchhhHhhhh-hhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           79 IALLGVTINQNTYFEGLYLASSSMASAMG-NLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        79 ~g~~~~~~~~~~~~~al~~~~~~~a~~l~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      ..+..++.++.++..++++.|.+.+-.+. .+.-+.+.++++++++|++++.      +++|+.+.++|++.+-.
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhhc
Confidence            44555588999999999999999998875 6999999999999999999999      99999999999988864

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.36  E-value=0.0021  Score=49.87  Aligned_cols=67  Identities=13%  Similarity=0.168  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHHHhhhcccchhhHhhh-hhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           80 ALLGVTINQNTYFEGLYLASSSMASAM-GNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        80 g~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      .+.++.+++.++..++++.|.+.+-.+ ..+.-+.+.++++++++|++++.      +++|+.+.++|++.+-.
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            455557889999999999999999877 56889999999999999999999      99999999999999864

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=97.33  E-value=0.0013  Score=60.67  Aligned_cols=141  Identities=15%  Similarity=0.193  Sum_probs=113.4

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHCC---CChHHHHHHHHHHHHHHHHHHHHHh---hccccCCCCCHHHHHHHHH
Q 017191            5 RDYKPAMAMLALQFSYAVVALSTRAALLQG---MNPRVFVVYRQAIATLFMAPMAYLS---SRKYKSSSMGLRSFSLIFF   78 (375)
Q Consensus         5 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~---~~p~~~~~~r~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~   78 (375)
                      |...|-++.+++++++|...++.|.-.++.   ++--.+-.+-.++..++++|...+-   +.++. ..++..+...++.
T Consensus       244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F-~lP~~~q~~~vv~  322 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERF-ELPSSTQFSLVVF  322 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcc-cCCCCceeEeeeH
Confidence            457899999999999999999999887632   4444444444566666777554332   33332 3446667778889


Q ss_pred             HHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           79 IALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        79 ~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      .++++.+++..+|..|.-.+++-.+++-..++....++...++.+.++++.      .++|.+..++|-+++..
T Consensus       323 ~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn~  390 (416)
T KOG2765|consen  323 NNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVNI  390 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHhheec
Confidence            999999999999999999999999999999888889999999899999999      99999999999998875

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.31  E-value=0.0014  Score=49.37  Aligned_cols=56  Identities=21%  Similarity=0.304  Sum_probs=35.5

Q ss_pred             hhhhHhHHHHHHHhccCCcchh-hhhhhHHHHHHHHHHHHHhcccccchhhhhHHHH
Q 017191          256 IGSGVSFCVQAWCISKRGPLFS-AMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGV  311 (375)
Q Consensus       256 ~~~~~~~~~~~~a~~~~~~~~~-s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~li  311 (375)
                      .+.++++.++.+++|+.+.+.+ .+...+..+.+.+.|.+++||++++.+++|+.+|
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3678889999999999999876 5566799999999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.29  E-value=0.0062  Score=49.47  Aligned_cols=130  Identities=12%  Similarity=0.090  Sum_probs=95.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017191           10 AMAMLALQFSYAVVALSTRAALLQGMN-PRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQ   88 (375)
Q Consensus        10 ~l~~l~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   88 (375)
                      .++.+++..+-+....+.-..-+. .+ |...+++-+..+.+++..+....+++.. ...+ +..++....|+++ ...-
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~-~~~~-~~p~w~~lGG~lG-~~~V   78 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSL-ASLS-SVPWWAYLGGLLG-VFFV   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhccccc-chhc-cCChHHhccHHHH-HHHH
Confidence            455666666667777666666444 55 9999999999999999888877776422 2222 2234455588888 8888


Q ss_pred             HHHHhhhcccchhhHhhhh-hhhHHHHHHHHHH----hhccccCCCccchhhhhhhHHHHhhhHhH
Q 017191           89 NTYFEGLYLASSSMASAMG-NLIPAITFVMASI----VGLEKIDLGSVRSVAKILGTIFCVGGAIS  149 (375)
Q Consensus        89 ~~~~~al~~~~~~~a~~l~-~~~pi~~~ll~~l----~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l  149 (375)
                      .+..+.....+++.+..+. .-+-+...++..+    .-+++++++      +++|+++.++|+.+
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence            8899999999999888764 4566666777774    357788888      99999999999864

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.28  E-value=0.00088  Score=61.81  Aligned_cols=139  Identities=12%  Similarity=0.181  Sum_probs=112.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHH---CCCChHHHHHHHHHHHHHHHH-HHHHHhhcccc---CC-CCCHHHHHHHH
Q 017191            6 DYKPAMAMLALQFSYAVVALSTRAALL---QGMNPRVFVVYRQAIATLFMA-PMAYLSSRKYK---SS-SMGLRSFSLIF   77 (375)
Q Consensus         6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~---~~~~p~~~~~~r~~~~~~~l~-~~~~~~~~~~~---~~-~~~~~~~~~~~   77 (375)
                      ++.|.+..+++.+..+...++.|..+.   +.++++....+-.-++.+.++ |+....+....   .. ..+.. .....
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~  239 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL  239 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence            578999999999999999999999983   458999998888888888888 87665443221   11 23334 33334


Q ss_pred             HHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           78 FIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        78 ~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      +.+++. ...+...|..+..+++-.-++...+-=+++...+++++++++++.      +..|..++++|+.+-..
T Consensus       240 ~~sv~~-f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  240 LNSVLA-FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLYSR  307 (316)
T ss_pred             HHHHHH-HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHHHH
Confidence            444666 777888899999999999999999999999999999999999999      99999999999998873

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.28  E-value=0.0023  Score=48.71  Aligned_cols=67  Identities=19%  Similarity=0.195  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHhhhcccchhhHhhh-hhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           80 ALLGVTINQNTYFEGLYLASSSMASAM-GNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        80 g~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      .++++..++.+...++++.|.+.+-.+ ...-.+.+++.++++++|+.+..      +++++.+.++|++.+-.
T Consensus        36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhhh
Confidence            344447889999999999999988766 57899999999999999999999      99999999999998753

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.28  E-value=0.0033  Score=48.31  Aligned_cols=65  Identities=11%  Similarity=0.076  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHHHhhhcccchhhHhhh-hhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHh
Q 017191           81 LLGVTINQNTYFEGLYLASSSMASAM-GNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMA  151 (375)
Q Consensus        81 ~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~  151 (375)
                      +.++..++.+...+++..|.+.+-.+ ....-+.+.+++++++||++++.      +++++.+.+.|++.+-
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhh
Confidence            44557899999999999999988766 46999999999999999999999      9999999999999875

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.25  E-value=0.00072  Score=60.58  Aligned_cols=79  Identities=10%  Similarity=0.104  Sum_probs=68.3

Q ss_pred             hhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccccc
Q 017191          246 EIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKD  325 (375)
Q Consensus       246 ~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~~  325 (375)
                      +...+..-++ ...+...+.++++++.+|+...++..+..+++.++++++++.+++..||++..+..+|+.+........
T Consensus        16 ~~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   16 DTLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            3444444455 467788889999999999999999999999999999999999999999999999999999988766544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.12  E-value=0.0023  Score=59.78  Aligned_cols=136  Identities=13%  Similarity=0.136  Sum_probs=90.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHH--HHH--HHHhcCCCC-cccccccchhhHHHHhh
Q 017191          179 WLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQ--SAT--FAIFTEPDP-EAWNLHSSLEIFCCFFS  253 (375)
Q Consensus       179 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~--~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~  253 (375)
                      ...|.++.+++++||+.+.+-+|+ .++.+  .+.. |. ..+.+.  +.+  ......++. ......+...+......
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~--wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~   79 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKK-VKKWS--WETM-WS-VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLF   79 (345)
T ss_pred             hHHHHHHHHHHHHHhhcccccccc-cCCCc--hhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHH
Confidence            468999999999999999999998 44542  2222 33 222211  111  111111221 12222234445554555


Q ss_pred             hhhhhhHhHHHHHHHhccCCcchhhhh-hhHHHHHHHHHHHHHhcccc---c----chhhhhHHHHHhhhhheee
Q 017191          254 GAIGSGVSFCVQAWCISKRGPLFSAMF-NPLCTVIVTILAALLLHEEI---Y----TGSLVGAIGVILGLYAVLW  320 (375)
Q Consensus       254 g~~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pv~~~~~~~l~~~e~~---~----~~~~iG~~lil~g~~l~~~  320 (375)
                      |+ .=.+++..+..++|+.|.+....+ .-++-+.+.+++.+++||-.   +    ...++|.+++++|+.+..+
T Consensus        80 G~-~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         80 GA-LWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HH-HHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            55 567899999999999999977765 67889999999999999754   2    2456899999999999877

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.99  E-value=0.018  Score=51.51  Aligned_cols=186  Identities=6%  Similarity=-0.028  Sum_probs=118.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017191            9 PAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVTINQ   88 (375)
Q Consensus         9 g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   88 (375)
                      |++..+.+.+++|++++-.|.. +. -|++.+-++.+....+.-+.+..+++.    +    +-+.+.++.|.+. +.++
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~-~~-gDg~~fQw~~~~~i~~~g~~v~~~~~~----p----~f~p~amlgG~lW-~~gN   69 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKF-DT-GDGFFFQWVMCSGIFLVGLVVNLILGF----P----PFYPWAMLGGALW-ATGN   69 (254)
T ss_pred             CchhHHHHHHHhcccceeeEec-cC-CCcHHHHHHHHHHHHHHHHHHHHhcCC----C----cceeHHHhhhhhh-hcCc
Confidence            4678899999999999999966 33 577777766665555555555444332    1    2245667777777 8999


Q ss_pred             HHHHhhhcccchhhHhhhhhhhHHHH-HHHHHH-hhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCCcccCc---CC
Q 017191           89 NTYFEGLYLASSSMASAMGNLIPAIT-FVMASI-VGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGPKLLNT---EF  163 (375)
Q Consensus        89 ~~~~~al~~~~~~~a~~l~~~~pi~~-~ll~~l-~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~---~~  163 (375)
                      .+-.-.++..+.+....+.++.-+++ -..+++ +++++... ........+|++++++|..+...-+.+...+.   +.
T Consensus        70 ~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~-~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~  148 (254)
T PF07857_consen   70 ILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQV-PSSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEE  148 (254)
T ss_pred             eeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccc-cchhHHHHHHHHHHHHHHHheeeecCCCCCccccccc
Confidence            99999999999999999877644444 444443 45544332 23456688999999999888865433321110   00


Q ss_pred             ---Ccc-------ccccc--cCC-----CCCchHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 017191          164 ---LPE-------KSFLF--RSS-----GGENWLLGCLFLFASACCWSLWLILQVPVSAS  206 (375)
Q Consensus       164 ---~~~-------~~~~~--~~~-----~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~  206 (375)
                         ..+       ++..+  ++.     ..+....|+.+++++++.|+...+=..+..++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~  208 (254)
T PF07857_consen  149 TPLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH  208 (254)
T ss_pred             cccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence               000       00000  000     01135689999999999999877766655444

The region concerned is approximately 280 residues long.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.78  E-value=0.013  Score=44.04  Aligned_cols=57  Identities=21%  Similarity=0.074  Sum_probs=35.2

Q ss_pred             HHHHHHHHHHHHHhhhcccchhhHhhh-hhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHH
Q 017191           80 ALLGVTINQNTYFEGLYLASSSMASAM-GNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIF  142 (375)
Q Consensus        80 g~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l  142 (375)
                      .+..+.+++.++..++++.|.+.+-.+ ..+..+.+.+.+.+++||+++..      ++.|+.+
T Consensus        35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~l   92 (93)
T PF00893_consen   35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheee
Confidence            344557899999999999999999766 46999999999999999999999      9998875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.61  E-value=0.0083  Score=46.49  Aligned_cols=109  Identities=11%  Similarity=0.031  Sum_probs=75.6

Q ss_pred             HHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHhHHHHHH
Q 017191          188 ASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAW  267 (375)
Q Consensus       188 ~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  267 (375)
                      +-+++|+..+-+.|+..+..+ +..-.. +..-. ...    ++.             .|-..  ..++....+-..|++
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~-~~~~~~-~~~~~-~~~----Ll~-------------n~~y~--ipf~lNq~GSv~f~~   60 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLE-KVKASL-QLLQE-IKF----LLL-------------NPKYI--IPFLLNQSGSVLFFL   60 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcC-CccchH-HHHHH-HHH----HHH-------------hHHHH--HHHHHHHHHHHHHHH
Confidence            457899999999999887763 222221 21111 111    111             11111  133345566678889


Q ss_pred             HhccCCcchhhhh-hhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhhe
Q 017191          268 CISKRGPLFSAMF-NPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAV  318 (375)
Q Consensus       268 a~~~~~~~~~s~~-~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~  318 (375)
                      .+++.+.+.+.++ +.+.-+++++.++++.+|..+...++|++++++|+.+.
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            9999999999888 59999999999988877777888999999999998764

Many members are annotated as potential transmembrane proteins.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.60  E-value=0.0068  Score=54.23  Aligned_cols=133  Identities=10%  Similarity=0.011  Sum_probs=84.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHh
Q 017191          182 GCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVS  261 (375)
Q Consensus       182 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  261 (375)
                      |.+.+++|+++++...+=.|+....  |.+...++++....+......+..+..  .+      ..+.++. |. .-+.+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p--~f------~p~amlg-G~-lW~~g   68 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGFP--PF------YPWAMLG-GA-LWATG   68 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCCC--cc------eeHHHhh-hh-hhhcC
Confidence            4567788999999999988987654  677777777776655555555543221  11      1111111 11 22334


Q ss_pred             HHHHHHHhccCCcchhhhh-hhHHHHHHHHHHHH-Hhcccc-----cchhhhhHHHHHhhhhheeecccccc
Q 017191          262 FCVQAWCISKRGPLFSAMF-NPLCTVIVTILAAL-LLHEEI-----YTGSLVGAIGVILGLYAVLWGKAKDH  326 (375)
Q Consensus       262 ~~~~~~a~~~~~~~~~s~~-~~~~pv~~~~~~~l-~~~e~~-----~~~~~iG~~lil~g~~l~~~~~~~~~  326 (375)
                      ..+-.-.+|.+|-...-.+ ...+.+.+...+-+ +||++.     .+..++|++++++|..+...-|.+.+
T Consensus        69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~  140 (254)
T PF07857_consen   69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEK  140 (254)
T ss_pred             ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCC
Confidence            4445566777777655554 45577777777654 555433     55678999999999999887766554

The region concerned is approximately 280 residues long.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.54  E-value=0.031  Score=50.52  Aligned_cols=141  Identities=9%  Similarity=0.039  Sum_probs=111.3

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChHHHHHHHHHHHHHHHHHHHHHhhcccc---CCCCCHHHHHHHHHHH
Q 017191            5 RDYKPAMAMLALQFSYAVVALSTRAALL-QGMNPRVFVVYRQAIATLFMAPMAYLSSRKYK---SSSMGLRSFSLIFFIA   80 (375)
Q Consensus         5 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~-~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~g   80 (375)
                      +...|+.++....+.-|.....-..... ..+++..+.+.-.+...+.-..-....+....   .-..+++.++.+++.+
T Consensus       169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s  248 (327)
T KOG1581|consen  169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYS  248 (327)
T ss_pred             CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHH
Confidence            4678999999998888888877776655 45888888888777776665544322221111   0234667788999999


Q ss_pred             HHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           81 LLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        81 ~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      .++ ++++.+.|+-++.-++-.-+.+..+-=++..+++.+.++.++++.      ||+|+.+.+.|+.+=..
T Consensus       249 ~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~~~  313 (327)
T KOG1581|consen  249 TCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLEIL  313 (327)
T ss_pred             Hhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHHHH
Confidence            999 899999999999888888888889999999999999999999999      99999999999887654

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.16  E-value=0.0043  Score=54.17  Aligned_cols=133  Identities=14%  Similarity=0.107  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHh
Q 017191          182 GCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVS  261 (375)
Q Consensus       182 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  261 (375)
                      +.+++++=++.|+..-....|...   +|.+... .+.+|+++.....+++..+..     +...+..-+..|. .=.++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG---~p~qQ~l-GtT~GALifaiiv~~~~~p~~-----T~~~~iv~~isG~-~Ws~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGG---KPYQQTL-GTTLGALIFAIIVFLFVSPEL-----TLTIFIVGFISGA-FWSFG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCC---ChhHhhh-hccHHHHHHHHHHheeecCcc-----chhhHHHHHHhhh-Hhhhh
Confidence            567788889999987776665432   2444433 334445544444443322111     1122222233333 45678


Q ss_pred             HHHHHHHhccCCcchhhhh-hhHHHHHHHHHHHHHhcccccchhhh----hHHHHHhhhhheeecccc
Q 017191          262 FCVQAWCISKRGPLFSAMF-NPLCTVIVTILAALLLHEEIYTGSLV----GAIGVILGLYAVLWGKAK  324 (375)
Q Consensus       262 ~~~~~~a~~~~~~~~~s~~-~~~~pv~~~~~~~l~~~e~~~~~~~i----G~~lil~g~~l~~~~~~~  324 (375)
                      +..++++++..+.+++.++ .-.+-+-+.+++++.|||..+..+.+    ..++++.|+++..+.++.
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~  140 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRN  140 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccc
Confidence            8899999999999999997 55778888999999999999887764    567788888887776553

>TIGR00803 nst UDP-galactose transporter

Probab=96.01  E-value=0.035  Score=48.98  Aligned_cols=65  Identities=15%  Similarity=0.025  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhH
Q 017191           78 FIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAIS  149 (375)
Q Consensus        78 ~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l  149 (375)
                      ...+.+ ..+..+..+.+++.++...+....+.++++.+++.++++|+++..      +++|+.+.+.|+.+
T Consensus       157 ~~~~~~-a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~l  221 (222)
T TIGR00803       157 IVGLLN-VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHH-HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeEe
Confidence            333444 677778889999999999999999999999999999999999999      99999999988654

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.95  E-value=0.17  Score=46.94  Aligned_cols=142  Identities=11%  Similarity=-0.010  Sum_probs=96.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhCC---cHHHHHHHHHHHHHHHHHHHHHhcCCC--------CcccccccchhhHH
Q 017191          181 LGCLFLFASACCWSLWLILQVPVSASYP---DHLSLSAWMCFLATLQSATFAIFTEPD--------PEAWNLHSSLEIFC  249 (375)
Q Consensus       181 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~--------~~~~~~~~~~~~~~  249 (375)
                      .=....++..+-++......|+..++..   .+.+..+..-..-.+++....+..++.        ...+-...+....-
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            3445555566667777777776554431   355666666666666666666654311        01111112222333


Q ss_pred             HHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccc
Q 017191          250 CFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKA  323 (375)
Q Consensus       250 ~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~  323 (375)
                      +..-++ ...+-..+++.+..+.+++..++...+..+.+.++.+++++++++..||...++...|+.+......
T Consensus        95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCC
Confidence            333333 3556667889999999999999999999999999999999999999999999999999999885443

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.69  E-value=0.35  Score=39.49  Aligned_cols=138  Identities=10%  Similarity=0.016  Sum_probs=86.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191            6 DYKPAMAMLALQFSYAVVALSTRAALLQGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT   85 (375)
Q Consensus         6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   85 (375)
                      .....+..+.+..+-.....+.-.+....-+|..-.+..+..+.+++..+..+..++.. .....+..++.+..|+++ +
T Consensus         3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~-~a~~~~~pwW~~~GG~lG-a   80 (150)
T COG3238           3 MYLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPG-LAAVASAPWWAWIGGLLG-A   80 (150)
T ss_pred             cHHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCc-hhhccCCchHHHHccchh-h
Confidence            34455566666666666666666554442359999999999999998888877433322 222234455666677776 5


Q ss_pred             HHHHHHHhhhcccchhhHhhh-hhhhHHHHHHHHHHh----hccccCCCccchhhhhhhHHHHhhhHhHHh
Q 017191           86 INQNTYFEGLYLASSSMASAM-GNLIPAITFVMASIV----GLEKIDLGSVRSVAKILGTIFCVGGAISMA  151 (375)
Q Consensus        86 ~~~~~~~~al~~~~~~~a~~l-~~~~pi~~~ll~~l~----~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~  151 (375)
                      ..-..-.......+++....+ ..-+-+...++..+=    -+.+++..      +++|+++.++|++++.
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~------r~lgi~L~l~gil~~~  145 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLP------RILGILLVLAGILLAR  145 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHH------HHHHHHHHHHHHHHhc
Confidence            555555555666665555443 455555556655532    23556666      9999999999955554

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=95.62  E-value=0.14  Score=46.80  Aligned_cols=139  Identities=11%  Similarity=0.129  Sum_probs=110.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChHHHHHHHHHHHHHHHHHHHHHhhccc----cC-CCCCHHHHHHHHHHH
Q 017191            7 YKPAMAMLALQFSYAVVALSTRAALL-QGMNPRVFVVYRQAIATLFMAPMAYLSSRKY----KS-SSMGLRSFSLIFFIA   80 (375)
Q Consensus         7 ~~g~l~~l~~~~~~~~~~~~~k~~~~-~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~----~~-~~~~~~~~~~~~~~g   80 (375)
                      ..|+.+++...+.-+...+..|+..+ .+.+-+.++++..+.+.+.+....+..+...    .. .......+..+.+.+
T Consensus       156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc  235 (314)
T KOG1444|consen  156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSC  235 (314)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence            45788999999999999999999887 3477888999999999888888776555311    00 122345567777888


Q ss_pred             HHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           81 LLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        81 ~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      +++ .+-..+-+++.+..++...++.....-..+.+...++.+++.++.      .++|+.+++.|.++-..
T Consensus       236 v~g-f~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~------n~~gll~~~~ggv~Y~~  300 (314)
T KOG1444|consen  236 VMG-FGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL------NVIGLLVGFFGGVLYSY  300 (314)
T ss_pred             HHH-HHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh------hhHHHHHHhhhhhHHhh
Confidence            888 677777889999999998888887777777788888889999999      99999999999888763

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.61  E-value=0.0065  Score=55.22  Aligned_cols=126  Identities=13%  Similarity=0.160  Sum_probs=92.9

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhh
Q 017191          177 ENWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAI  256 (375)
Q Consensus       177 ~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  256 (375)
                      ..+..|.++++.+++..+...++.|+..++.. .   ...               ..++. .....-...|+    .|++
T Consensus        17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~-~---~~~---------------ra~~g-g~~yl~~~~Ww----~G~l   72 (335)
T KOG2922|consen   17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAG-A---SGL---------------RAGEG-GYGYLKEPLWW----AGML   72 (335)
T ss_pred             cCceeeeeehhhccEEEeeehhhhHHHHHHHh-h---hcc---------------cccCC-CcchhhhHHHH----HHHH
Confidence            45678999999999999999999998776641 1   000               10111 11111111222    4666


Q ss_pred             hhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecccccc
Q 017191          257 GSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKDH  326 (375)
Q Consensus       257 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~~~  326 (375)
                      ...++-.+.+.+....+++.++++..++.+.+.+++..+++|++++...+|+++.++|-.++...-.+++
T Consensus        73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~  142 (335)
T KOG2922|consen   73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ  142 (335)
T ss_pred             HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc
Confidence            6667777777888888999999999999999999999999999999999999999999888766554444

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.55  E-value=0.08  Score=46.07  Aligned_cols=140  Identities=9%  Similarity=0.027  Sum_probs=96.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChHHHHHHHHHHHHHHHHHHHHHhhcccc---CCCCCHHHHHHHHHHHHH
Q 017191            7 YKPAMAMLALQFSYAVVALSTRAALL-QGMNPRVFVVYRQAIATLFMAPMAYLSSRKYK---SSSMGLRSFSLIFFIALL   82 (375)
Q Consensus         7 ~~g~l~~l~~~~~~~~~~~~~k~~~~-~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~   82 (375)
                      -.|-++++++...-|.....--..-. .+-+.-.+.+.-.+-+.+.+..-.++.+.-..   .....+..|..+.+.++.
T Consensus       171 g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~  250 (337)
T KOG1580|consen  171 GFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIA  250 (337)
T ss_pred             chHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHH
Confidence            35677777777777776665433311 11223334444444444443332221111000   001134567888889999


Q ss_pred             HHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhh
Q 017191           83 GVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALL  153 (375)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~  153 (375)
                      + ++++.|.|.-+.+-+|-..+++..+--+|+.++++++++..++.+      ||+|..+.+.|...-..+
T Consensus       251 s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D~~~  314 (337)
T KOG1580|consen  251 S-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTADVVD  314 (337)
T ss_pred             H-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhHhhc
Confidence            9 999999999999999999999999999999999999999999999      999999999998877653

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=95.41  E-value=0.015  Score=48.99  Aligned_cols=66  Identities=15%  Similarity=0.139  Sum_probs=60.7

Q ss_pred             HhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccccc
Q 017191          260 VSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKAKD  325 (375)
Q Consensus       260 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~~~  325 (375)
                      .+.++|..++++++++.++.+...+-.+..+++++.+|+++...+++.+++.+.|+++..+..+..
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~  130 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH  130 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh
Confidence            355789999999999999999999999999999999999999999999999999999988876644

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=95.30  E-value=0.11  Score=44.85  Aligned_cols=137  Identities=12%  Similarity=0.076  Sum_probs=105.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-CCCChHHHHHHHHHHHHHHHHHHHHHhhcccc---CCCCCHHHHHHHHHHHHHHH
Q 017191            9 PAMAMLALQFSYAVVALSTRAALL-QGMNPRVFVVYRQAIATLFMAPMAYLSSRKYK---SSSMGLRSFSLIFFIALLGV   84 (375)
Q Consensus         9 g~l~~l~~~~~~~~~~~~~k~~~~-~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~   84 (375)
                      |++.|....+.-+..-...|.-.+ .+...+...++.-+++.+++..+.++.+.+..   .-..+.....+.++.|++. 
T Consensus       156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s-  234 (309)
T COG5070         156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS-  234 (309)
T ss_pred             ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH-
Confidence            455555555555555556665544 33667888999999999999998877765443   1234455566788888888 


Q ss_pred             HHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           85 TINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        85 ~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      ++-..+--++++-++.+..+.+..+.-.-.++-+.++++|+.+..      .+.++.+++...++-..
T Consensus       235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~------si~sillGflsg~iYav  296 (309)
T COG5070         235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYAV  296 (309)
T ss_pred             hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHHH
Confidence            677778889999999999999999999999999999999999999      99999999887766653

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=94.56  E-value=0.19  Score=46.57  Aligned_cols=140  Identities=14%  Similarity=0.145  Sum_probs=87.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHH--hcCCCCc-ccccccchhhHHHHhhh
Q 017191          178 NWLLGCLFLFASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAI--FTEPDPE-AWNLHSSLEIFCCFFSG  254 (375)
Q Consensus       178 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~g  254 (375)
                      ....|+++..+++++.+.+.+=.||.. +.+ -.+.=..+.+++-+ ..|...  ..-++.. .....+...++...+.|
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk-~Ws-WEs~Wlv~gi~swl-i~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVK-GWS-WESYWLVQGIFSWL-IVPWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcC-Ccc-HHHHHHHHHHHHHH-HHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            346899999999999999999999754 442 22222223333333 333222  2223321 12223344555556666


Q ss_pred             hhhhhHhHHHHHHHhccCCcch-hhhhhhHHHHHHHHHHHHHhcc-------cccchhhhhHHHHHhhhhheeec
Q 017191          255 AIGSGVSFCVQAWCISKRGPLF-SAMFNPLCTVIVTILAALLLHE-------EIYTGSLVGAIGVILGLYAVLWG  321 (375)
Q Consensus       255 ~~~~~~~~~~~~~a~~~~~~~~-~s~~~~~~pv~~~~~~~l~~~e-------~~~~~~~iG~~lil~g~~l~~~~  321 (375)
                      + .=+++-..|..++|++|.+. .++..-+..+++.++--++.|+       +-....++|.++.++|+.+.-+.
T Consensus        81 ~-lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   81 V-LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             H-HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            6 46677788899999999874 4455666666776665555432       22346788999999999998664

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PRK02237 hypothetical protein; Provisional

Probab=93.09  E-value=1.1  Score=34.08  Aligned_cols=53  Identities=17%  Similarity=0.098  Sum_probs=40.9

Q ss_pred             hhcc-cchhhHhhhh-hhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           94 GLYL-ASSSMASAMG-NLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        94 al~~-~~~~~a~~l~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      .++- .+.+.+-..+ ....+...+..+.+-++|++++      +++|..++++|+.++..
T Consensus        51 Tl~p~~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~------D~iGa~v~L~G~~iI~~  105 (109)
T PRK02237         51 TLQPDAAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRW------DWIGAAICLVGMAVIMY  105 (109)
T ss_pred             hcCCchhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChh------HHHhHHHHHHhHHHhee
Confidence            3543 3445555444 4666667789999999999999      99999999999998864

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=92.36  E-value=3.6  Score=37.60  Aligned_cols=138  Identities=21%  Similarity=0.173  Sum_probs=93.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHCC----CChHHHHHHHHHHHHHHHHHHHHHhhccccC----------CCCCHH
Q 017191            6 DYKPAMAMLALQFSYAVVALSTRAALLQG----MNPRVFVVYRQAIATLFMAPMAYLSSRKYKS----------SSMGLR   71 (375)
Q Consensus         6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~----~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~----------~~~~~~   71 (375)
                      ...|..+...+..+-|.-+.+.+..+.++    -+|+...+.-.-...+.++|..+..+.....          +..-.+
T Consensus       162 ~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~r  241 (349)
T KOG1443|consen  162 NIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILR  241 (349)
T ss_pred             eehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHH
Confidence            45789999999999999999999998742    2466666665555666666665554432210          111233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHH
Q 017191           72 SFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISM  150 (375)
Q Consensus        72 ~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~  150 (375)
                      ....+.+.|... ++--.+-+.=+..++.-..++..--.=+.+.+++....+++++..      .|.|..++..|+.+-
T Consensus       242 v~g~i~l~g~la-F~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~l------N~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  242 VIGLISLGGLLA-FLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLL------NWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhh------HHHHHHHHHHHHHHh
Confidence            344444555555 222233334455556555666666777888999999999999999      999999999999887

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=91.97  E-value=0.96  Score=34.37  Aligned_cols=53  Identities=15%  Similarity=0.131  Sum_probs=42.3

Q ss_pred             hhcccchhhHhhhh-hhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           94 GLYLASSSMASAMG-NLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        94 al~~~~~~~a~~l~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      .++-.+.+.+-..+ ....+...+..+.+-++|++++      +++|..+|++|+.++..
T Consensus        50 Tl~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~------D~iGa~i~L~G~~iI~~  103 (107)
T PF02694_consen   50 TLQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRW------DWIGAAICLVGVAIILF  103 (107)
T ss_pred             hcCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChH------HHHhHHHHHHhHHheEe
Confidence            35555555555444 4677778889999999999999      99999999999999874

; GO: 0016020 membrane

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=91.76  E-value=2.5  Score=32.02  Aligned_cols=113  Identities=18%  Similarity=0.164  Sum_probs=72.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH---CCCCh--HHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH
Q 017191           11 MAMLALQFSYAVVALSTRAALL---QGMNP--RVFVVYRQAIATLFMAPMAYLSSRKYKSSSMGLRSFSLIFFIALLGVT   85 (375)
Q Consensus        11 l~~l~~~~~~~~~~~~~k~~~~---~~~~p--~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   85 (375)
                      .-+++..++||...++.|....   +--++  ....+.|-...                 -..+++++..    -+++ -
T Consensus         6 ~~lvaVgllWG~Tnplirrgs~g~~~v~~~~~k~~~~lqe~~t-----------------l~l~w~Y~iP----FllN-q   63 (125)
T KOG4831|consen    6 DKLVAVGLLWGATNPLIRRGSLGWDKVKSSSRKIMIALQEMKT-----------------LFLNWEYLIP----FLLN-Q   63 (125)
T ss_pred             HHHHHHHHHHccccHHHHHHHhhHhhccCchHHHHHHHHHHHH-----------------HHHhHHHHHH----HHHH-H
Confidence            3567889999999999997732   11111  12222222111                 1112233222    2234 3


Q ss_pred             HHHHHHHhhhcccchhhHhhhh-hhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHh
Q 017191           86 INQNTYFEGLYLASSSMASAMG-NLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMA  151 (375)
Q Consensus        86 ~~~~~~~~al~~~~~~~a~~l~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~  151 (375)
                      .+..+||.-++..+.+.+..+. ++.-.|+.+.+..+..|-...+      .++|..+.++|+.+.+
T Consensus        64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~------a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGL------ALLGTSLIVFGIWLCI  124 (125)
T ss_pred             hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccce------eehhhhHHhhhhhhee
Confidence            5567888999999999999885 5788888888888555555566      8889999999877643

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=91.55  E-value=0.082  Score=46.66  Aligned_cols=109  Identities=10%  Similarity=0.018  Sum_probs=84.5

Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccchhhHHHHhhhhhhhhHhHHHHHHHhccCCcchhhhhhhHHHH
Q 017191          207 YPDHLSLSAWMCFLATLQSATFAIFTEPDPEAWNLHSSLEIFCCFFSGAIGSGVSFCVQAWCISKRGPLFSAMFNPLCTV  286 (375)
Q Consensus       207 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv  286 (375)
                      .+.|...++.....-+++-.+...+..+..       ..-|-..+.+++ ..+=+.++...|.++++-+.++.+..-..+
T Consensus        45 iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~-------~~~~~hYilla~-~DVEaNy~vV~AyQyTsmtSi~lLDcwaip  116 (336)
T KOG2766|consen   45 INAPTSQTFLNYVLLALVYGPIMLFRRKYI-------KAKWRHYILLAF-VDVEANYFVVKAYQYTSMTSIMLLDCWAIP  116 (336)
T ss_pred             CCCccHHHHHHHHHHHHHHhhHHHhhhHHH-------HHHHHHhhheeE-EeecccEEEeeehhhcchHHHHHHHHhhhH
Confidence            335777777777777777777777654221       112333445555 455666777899999999999999999999


Q ss_pred             HHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccc
Q 017191          287 IVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKA  323 (375)
Q Consensus       287 ~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~  323 (375)
                      ...+++|++++.+-.+.++.|.++.+.|+.++....-
T Consensus       117 ~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV  153 (336)
T KOG2766|consen  117 CVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDV  153 (336)
T ss_pred             HHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeee
Confidence            9999999999999999999999999999998877544

>PRK02237 hypothetical protein; Provisional

Probab=91.39  E-value=0.93  Score=34.52  Aligned_cols=48  Identities=8%  Similarity=0.076  Sum_probs=41.4

Q ss_pred             hhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccc
Q 017191          276 FSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKA  323 (375)
Q Consensus       276 ~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~  323 (375)
                      ..+.+.-.-.+.+++.++.+-|++|+...++|.++.++|+.++.+..|
T Consensus        61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            455667777888999999999999999999999999999988876554

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=91.19  E-value=0.95  Score=34.39  Aligned_cols=48  Identities=15%  Similarity=0.137  Sum_probs=42.1

Q ss_pred             hhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccc
Q 017191          276 FSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKA  323 (375)
Q Consensus       276 ~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~  323 (375)
                      ..+.+.-.-.+.+++.++.+-|++|+...++|.++.++|+.++.+..|
T Consensus        59 vYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   59 VYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             HHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            455667778889999999999999999999999999999999887654

; GO: 0016020 membrane

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=90.72  E-value=0.11  Score=46.95  Aligned_cols=134  Identities=13%  Similarity=0.096  Sum_probs=76.7

Q ss_pred             HHHHHHHHHHHHHHHHhhhhCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCc-----------ccccccchhhHHHHhhhh
Q 017191          187 FASACCWSLWLILQVPVSASYPDHLSLSAWMCFLATLQSATFAIFTEPDPE-----------AWNLHSSLEIFCCFFSGA  255 (375)
Q Consensus       187 l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~g~  255 (375)
                      +++.+||+-+-..+|-..++.. ..+...|=+..+.++...+..++-+...           +....++..+...+..|+
T Consensus         2 ~itmlcwGSW~nt~kL~~r~gR-~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv   80 (336)
T PF07168_consen    2 VITMLCWGSWPNTQKLAERRGR-LPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV   80 (336)
T ss_pred             eeehhhhcChHHHHHHHHhcCC-ccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence            4567888888888886655432 2234555555555554444433322211           111122223333333344


Q ss_pred             hhhhHhHHHHHHHhccCCcchhhhhh-hHHHHHHHHHHHHHhccccc--chhhhhHHHHHhhhhheeeccc
Q 017191          256 IGSGVSFCVQAWCISKRGPLFSAMFN-PLCTVIVTILAALLLHEEIY--TGSLVGAIGVILGLYAVLWGKA  323 (375)
Q Consensus       256 ~~~~~~~~~~~~a~~~~~~~~~s~~~-~~~pv~~~~~~~l~~~e~~~--~~~~iG~~lil~g~~l~~~~~~  323 (375)
                       .--++..+..+++...|-+++-++. .+..+++.++.|+. ..+..  ..-..|++++++++++-....+
T Consensus        81 -vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n~a~iLF~GV~cf~iAI~lga~ah~  149 (336)
T PF07168_consen   81 -VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKINRAEILFPGVACFLIAIILGAAAHK  149 (336)
T ss_pred             -hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCCCceEEEccHHHHHHHHHHHHHHHh
Confidence             5567888888999888887766653 33444556666643 45543  3556799999999888654433

Transport is dependent on glucose and a proton gradient [].

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=89.70  E-value=1.8  Score=32.66  Aligned_cols=47  Identities=15%  Similarity=0.145  Sum_probs=37.6

Q ss_pred             hhhHhhhh-hhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191          100 SSMASAMG-NLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus       100 ~~~a~~l~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      .+.+-.-+ ....+...+..+++-|.+++++      +++|..+|++|+.++..
T Consensus        57 ~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~------D~~Ga~icl~G~~vil~  104 (109)
T COG1742          57 FGRVYAAYGGVYIAASLAWLWVVDGVRPDRY------DWIGAAICLAGVAVILF  104 (109)
T ss_pred             hhhHHHHhcchHHHHHHHHHHHHcCcCCcHH------HhhhHHHHHhceeeeEe
Confidence            44444333 4667777888889999999999      99999999999888874

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=89.24  E-value=2.9  Score=37.53  Aligned_cols=140  Identities=14%  Similarity=0.181  Sum_probs=98.7

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChHHHHHHHHHHHHHHHHHHHHHhhccccC----CCCCHHHHHHHHHHH
Q 017191            6 DYKPAMAMLALQFSYAVVALSTRAALL-QGMNPRVFVVYRQAIATLFMAPMAYLSSRKYKS----SSMGLRSFSLIFFIA   80 (375)
Q Consensus         6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~-~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~g   80 (375)
                      +..|+..+-.+.+.-+...-+-...+. ..-+..+++++...++.++++..+.+.+.-.+.    .+.+.|...+.++.+
T Consensus       188 ~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s  267 (367)
T KOG1582|consen  188 NLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFS  267 (367)
T ss_pred             ceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHH
Confidence            345555555555555554444444443 234568888888889988888877655432220    234667777888888


Q ss_pred             HHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           81 LLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        81 ~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      ..+ .++..+...=++..++..++.+...--..+.+++++++.++++-.      -.-+.++.+.|+.+=..
T Consensus       268 ~~g-ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~q------y~~~gllv~lgI~Ln~y  332 (367)
T KOG1582|consen  268 LAG-YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQ------YVWSGLLVVLGIYLNMY  332 (367)
T ss_pred             HHh-HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHH------HhhhhHHHHHHHHhhcc
Confidence            777 566666555566667888888888888899999999999999988      88888899999888774

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=88.23  E-value=0.71  Score=41.49  Aligned_cols=65  Identities=15%  Similarity=0.088  Sum_probs=58.6

Q ss_pred             hhhHhHHHHHHHhccCCcchhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeec
Q 017191          257 GSGVSFCVQAWCISKRGPLFSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWG  321 (375)
Q Consensus       257 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~  321 (375)
                      +-..+-.+.+.++..++++...++.-...+|+.+++.-+++.+++..||.|+..+.+|+..+-..
T Consensus        95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            55566678889999999999999999999999999999999999999999999999998887543

>PRK12650 putative monovalent cation/H+ antiporter subunit A; Reviewed

Probab=83.87  E-value=70  Score=34.82  Aligned_cols=37  Identities=8%  Similarity=0.204  Sum_probs=21.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhhhhhh
Q 017191           71 RSFSLIFFIALLGVTINQNTYFEGLYLASSSMASAMGNL  109 (375)
Q Consensus        71 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~l~~~  109 (375)
                      ++...++..|+.+...+  ..|.-+.--+.+.+++..-+
T Consensus       620 ~rl~av~~~g~~G~~~a--l~f~~~~APDvAlTq~~Vet  656 (962)
T PRK12650        620 TRLAAVVLVGVVGVGVT--LQMLTLGAPDVALTQLLVEA  656 (962)
T ss_pred             HHHHHHHHHHHHHHHHH--HHHHHhCCcHHHHHHHHHHH
Confidence            34667777788774443  33444555566666666544

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=83.84  E-value=2.3  Score=38.26  Aligned_cols=144  Identities=15%  Similarity=0.104  Sum_probs=99.7

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHCC-CChHHHHHHHHHHHHHHHHHHHHHhhcccc----CCCCCHHHHHHHHHHH
Q 017191            6 DYKPAMAMLALQFSYAVVALSTRAALLQG-MNPRVFVVYRQAIATLFMAPMAYLSSRKYK----SSSMGLRSFSLIFFIA   80 (375)
Q Consensus         6 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~-~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~g   80 (375)
                      .+.|.++.+++.+.-+...+..|..+..- -.-+.++++..+.+.++++|...+.+.-..    ......+-|..+.+.|
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG  262 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence            46899999999999999999999665431 124677888889999999998876553211    1223666777888888


Q ss_pred             HHHHHHHHHHHHhhhcccchhhHhhhhhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhhcCC
Q 017191           81 LLGVTINQNTYFEGLYLASSSMASAMGNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALLRGP  156 (375)
Q Consensus        81 ~~~~~~~~~~~~~al~~~~~~~a~~l~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~  156 (375)
                      +++...++.. .+=++.++|-.--+=...-...=.++++.+++|..+..      .|-+.++.++|-..-...++.
T Consensus       263 lfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~l------wwtsn~~vLvgs~~YT~vk~~  331 (347)
T KOG1442|consen  263 LFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGL------WWTSNIVVLVGSLAYTLVKEH  331 (347)
T ss_pred             HHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhh------eeeeeEEEEehhHHHHHHHHH
Confidence            8885555443 23445555433222222334445678888999999988      999999999998877654443

>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional

Probab=83.03  E-value=28  Score=30.10  Aligned_cols=33  Identities=12%  Similarity=0.193  Sum_probs=22.2

Q ss_pred             HHHHHHHhcccccchhhhhHHHHHh--hhhheeec
Q 017191          289 TILAALLLHEEIYTGSLVGAIGVIL--GLYAVLWG  321 (375)
Q Consensus       289 ~~~~~l~~~e~~~~~~~iG~~lil~--g~~l~~~~  321 (375)
                      -.+|..++.+-.-+.+++|..+.++  |.+...++
T Consensus       133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~~  167 (198)
T PRK06638        133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLARR  167 (198)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            4457777788888888888877664  54444443

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=82.20  E-value=5.4  Score=30.16  Aligned_cols=48  Identities=13%  Similarity=0.092  Sum_probs=41.2

Q ss_pred             hhhhhhhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeeccc
Q 017191          276 FSAMFNPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGKA  323 (375)
Q Consensus       276 ~~s~~~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~~  323 (375)
                      ..+...-.-.+.+.+..++.-|.+|+.+.++|.++.++|..++....+
T Consensus        60 vYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR  107 (109)
T COG1742          60 VYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR  107 (109)
T ss_pred             HHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence            445566777888999999999999999999999999999888887755

>PF15102 TMEM154: TMEM154 protein family

Probab=80.95  E-value=1.3  Score=35.80  Aligned_cols=24  Identities=13%  Similarity=0.087  Sum_probs=14.8

Q ss_pred             hhhHHHHHhhhhheeecccccccc
Q 017191          305 LVGAIGVILGLYAVLWGKAKDHFD  328 (375)
Q Consensus       305 ~iG~~lil~g~~l~~~~~~~~~~~  328 (375)
                      ++++++++..++++.+.|||+.|+
T Consensus        66 VLLvlLLl~vV~lv~~~kRkr~K~   89 (146)
T PF15102_consen   66 VLLVLLLLSVVCLVIYYKRKRTKQ   89 (146)
T ss_pred             HHHHHHHHHHHHheeEEeecccCC
Confidence            344555666677777766666654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	375
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.1
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.66
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.58
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.55

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.10  E-value=6.5e-11  Score=94.58  Aligned_cols=71  Identities=11%  Similarity=0.113  Sum_probs=54.2

Q ss_pred             hhhhhhhhHhHHHHHHHhccCCcchhhhh-hhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecc
Q 017191          252 FSGAIGSGVSFCVQAWCISKRGPLFSAMF-NPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGK  322 (375)
Q Consensus       252 ~~g~~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~  322 (375)
                      .+++++++++|++|.+++|+.+++.+..+ ..+.|+++.+++++++||++++.+++|+++|++|+++..+.+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            35667899999999999999999999888 899999999999999999999999999999999999986543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.66  E-value=4.1e-08  Score=75.58  Aligned_cols=70  Identities=11%  Similarity=0.114  Sum_probs=64.2

Q ss_pred             hhhhhhhHhHHHHHHHhccCCcchhhhh-hhHHHHHHHHHHHHHhcccccchhhhhHHHHHhhhhheeecc
Q 017191          253 SGAIGSGVSFCVQAWCISKRGPLFSAMF-NPLCTVIVTILAALLLHEEIYTGSLVGAIGVILGLYAVLWGK  322 (375)
Q Consensus       253 ~g~~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pv~~~~~~~l~~~e~~~~~~~iG~~lil~g~~l~~~~~  322 (375)
                      .++++.++++.++.+++|+.+.+.+..+ ..+.|+++.+++++++||+++..+++|++++++|+++....+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4556788999999999999999999888 899999999999999999999999999999999999986543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.58  E-value=7.3e-07  Score=68.52  Aligned_cols=69  Identities=13%  Similarity=0.138  Sum_probs=63.7

Q ss_pred             HHHHHHHHHHHHHHHhhhcccchhhHhhh-hhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhh
Q 017191           78 FIALLGVTINQNTYFEGLYLASSSMASAM-GNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMAL  152 (375)
Q Consensus        78 ~~g~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~  152 (375)
                      +.+++.+.+++.++.+++++.|.+.+..+ ..+.|+++.+++++++||++++.      +++|+.+.+.|++++..
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~------~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            45666668999999999999999999988 79999999999999999999999      99999999999999874

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.55  E-value=2.4e-07  Score=73.84  Aligned_cols=70  Identities=14%  Similarity=0.155  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHHHHhhhcccchhhHhhh-hhhhHHHHHHHHHHhhccccCCCccchhhhhhhHHHHhhhHhHHhhh
Q 017191           78 FIALLGVTINQNTYFEGLYLASSSMASAM-GNLIPAITFVMASIVGLEKIDLGSVRSVAKILGTIFCVGGAISMALL  153 (375)
Q Consensus        78 ~~g~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~  153 (375)
                      +.+++.+++++.++++++++.+++.+..+ .++.|++++++++++++|++++.      +++|+.+.++|++++...
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~------~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhcC
Confidence            56666778999999999999999999998 89999999999999999999999      999999999999999753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00