Citrus Sinensis ID: 017250

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-----

MESELKDLNSKQLKSTASSDDGGSAKDDRPLLKPDAADNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASEVWISSFTKAELLTSN

cccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccHHHHHHHHcccccEEEEccccccccHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHHHcccccEEEEcccEEEcccEEEccccccccccccEEEEEEEccccccccccccccHHHHHHHHHHccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHHcccccccccccccc

ccHHHHcccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEccccccccccccccHHHHHcEEEEEccccccccccEEEEEccccccEEEEEEcccccHHEEEcccccccHHHHHHHccccEEEEccccHHHHHHHHHHHHHHHHHHcccccccEEEEcccccEcccEEEEEccccEcccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHHEEEEEEcccccccHHHcccHHHHHHHHHHHHHHHcccccccHHHcHHcc

meselkdlnskqlkstassddggsakddrpllkpdaADNIQELEKKFapyvrndvygtmgrgelplAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCtlfsapnrgedeqedyahmggwrRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKseneaknqskdedeakdqdeesgrpgaiisNHVSYLDILYhmsssfpsfvaKRSVAKLPLVGLISKCLgcvyvqreskssdfkgvsgVVTERVReahrdksapmmmlfpgtttngdyllpfktgaflarapvlpvilrypyqrfspawdsisgARHVFFLLCQFVNhievtslpvyhpsqqekddpklYAENVRRLMASEVWISSFTKAELLTSN

meselkdlnskqlkstassddggsakddrpllkpdaadniqelekkfapyvrnDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEqedyahmggwrRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVqekseneaknqskdedeakdqdeesgrpgaIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYvqreskssdfkgvsgvvtervreahrdksapmmmlfPGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASEVWissftkaelltsn

MESELKDLNSKQLkstassddggsakddRPLLKPDAADNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNqskdedeakdqdeesGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASEVWISSFTKAELLTSN

*******************************************EKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAP********DYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDV*****************************AIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQR*****************************MMLFPGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYH**********LYAENVRRLMASEVWISSFT********

**********************************************FAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRES************TERVREAHRDKSAPMMMLFPGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASEVWISSFTK**LLT**

***************************DRPLLKPDAADNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEK***********************RPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASEVWISSFTKAELLTSN

*************************************DNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASEVWISSFTKAELLTSN

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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MESELKDLNSKQLKSTASSDDGGSAKDDRPLLKPDAADNIQELEKKFAPYVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVxxxxxxxxxxxxxxxxxxxxxDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFPGTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASEVWISSFTKAELLTSN

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		375	2.2.26 [Sep-21-2011]
Q1LWG4		517	Lysophosphatidylcholine a	no	no	0.677	0.491	0.309	9e-29
Q8NF37		534	Lysophosphatidylcholine a	yes	no	0.696	0.488	0.313	5e-28
Q1HAQ0		534	Lysophosphatidylcholine a	yes	no	0.749	0.526	0.291	2e-27
Q3TFD2		534	Lysophosphatidylcholine a	yes	no	0.749	0.526	0.287	5e-27
Q0KHU5		533	1-acylglycerophosphocholi	yes	no	0.693	0.487	0.303	1e-26
Q28C60		522	Lysophospholipid acyltran	no	no	0.656	0.471	0.306	2e-26
Q6DCK1		522	Lysophospholipid acyltran	N/A	no	0.653	0.469	0.303	2e-25
Q8BYI6		544	Lysophosphatidylcholine a	no	no	0.682	0.470	0.286	7e-25
Q7L5N7		544	Lysophosphatidylcholine a	no	no	0.693	0.477	0.275	3e-23
P0C1Q3		544	Lysophosphatidylcholine a	no	no	0.565	0.389	0.299	2e-22

>sp\|Q1LWG4\|PCAT1_DANRE Lysophosphatidylcholine acyltransferase 1 OS=Danio rerio GN=lpcat1 PE=2 SV=1	Back alignment and function desciption

 Score =  127 bits (320), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 139/294 (47%), Gaps = 40/294 (13%)

Query: 68  EKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQEDYAHMGGWRRSV 127
           +K  I +  VTL P+R++ A  ++++ +    V T+     R E+  E  +    W R +
Sbjct: 37  QKLKIAVMTVTLFPVRLLFAAFMMLLAWPFAFVATV----GRSENAVEPLS----WWRWL 88

Query: 128 VVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGA 187
           V +  + + R M F  GF+W+                 K +     EA         P  
Sbjct: 89  VDLALKAIMRAMWFSGGFHWV---------------RVKGRPALPSEA---------PIL 124

Query: 188 IISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSG 247
            ++ H SY D +  ++ +  S V K     +P+ G + K +  V+V R  + S  K    
Sbjct: 125 TMAPHSSYFDAI-PVTMTMASIVMKAESKDIPVWGTLIKFIRPVFVSRSDQDSRRK---- 179

Query: 248 VVTERVREAHRDKSAPMMMLFP-GTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQ--RF 304
            V E  R A  +   P +M+FP GT TN   L+ FK GAF+   PV PV+LRYP +    
Sbjct: 180 TVEEIKRRASSNGEWPQIMIFPEGTCTNRSCLIAFKPGAFIPGVPVQPVVLRYPNELDTI 239

Query: 305 SPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMA 358
           S  W      + ++  LCQ  N +E+  LP Y PS++EK DP L+A NVRR+MA
Sbjct: 240 SWTWQGPGAFKILWLTLCQLHNFVEIEYLPTYTPSEEEKKDPALFASNVRRIMA 293

Possesses both acyltransferase and acetyltransferase activities. Activity is calcium-independent. Mediates the conversion of 1-acyl-sn-glycero-3-phosphocholine (LPC) into phosphatidylcholine (PC).
Danio rerio (taxid: 7955)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 6EC: 7

>sp\|Q8NF37\|PCAT1_HUMAN Lysophosphatidylcholine acyltransferase 1 OS=Homo sapiens GN=LPCAT1 PE=1 SV=2	Back alignment and function description

>sp\|Q1HAQ0\|PCAT1_RAT Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus GN=Lpcat1 PE=2 SV=2	Back alignment and function description

>sp\|Q3TFD2\|PCAT1_MOUSE Lysophosphatidylcholine acyltransferase 1 OS=Mus musculus GN=Lpcat1 PE=1 SV=1	Back alignment and function description

>sp\|Q0KHU5\|PCAT1_DROME 1-acylglycerophosphocholine O-acyltransferase 1 OS=Drosophila melanogaster GN=CG32699 PE=2 SV=1	Back alignment and function description

>sp\|Q28C60\|LPCT4_XENTR Lysophospholipid acyltransferase LPCAT4 OS=Xenopus tropicalis GN=lpcat4 PE=2 SV=1	Back alignment and function description

>sp\|Q6DCK1\|LPCT4_XENLA Lysophospholipid acyltransferase LPCAT4 OS=Xenopus laevis GN=lpcat4 PE=2 SV=2	Back alignment and function description

>sp\|Q8BYI6\|PCAT2_MOUSE Lysophosphatidylcholine acyltransferase 2 OS=Mus musculus GN=Lpcat2 PE=1 SV=1	Back alignment and function description

>sp\|Q7L5N7\|PCAT2_HUMAN Lysophosphatidylcholine acyltransferase 2 OS=Homo sapiens GN=LPCAT2 PE=1 SV=1	Back alignment and function description

>sp\|P0C1Q3\|PCAT2_RAT Lysophosphatidylcholine acyltransferase 2 OS=Rattus norvegicus GN=Lpcat2 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		375
224137214		402	predicted protein [Populus trichocarpa]	0.944	0.880	0.721	1e-154
255538570		382	acyltransferase, putative [Ricinus commu	0.930	0.913	0.726	1e-151
356510241		369	PREDICTED: 1-acylglycerophosphocholine O	0.901	0.915	0.725	1e-150
224063595		403	predicted protein [Populus trichocarpa]	0.944	0.878	0.708	1e-150
356518056		370	PREDICTED: 1-acylglycerophosphocholine O	0.904	0.916	0.719	1e-148
359492117		374	PREDICTED: lysophosphatidylcholine acylt	0.909	0.911	0.754	1e-144
357511061		390	1-acyl-sn-glycerol-3-phosphate acyltrans	0.912	0.876	0.718	1e-140
357511059		382	1-acyl-sn-glycerol-3-phosphate acyltrans	0.912	0.895	0.718	1e-140
449469993		390	PREDICTED: lysophosphatidylcholine acylt	0.933	0.897	0.684	1e-138
449496062		390	PREDICTED: lysophosphatidylcholine acylt	0.933	0.897	0.682	1e-138

>gi\|224137214\|ref\|XP_002327070.1\| predicted protein [Populus trichocarpa] gi\|222835385\|gb\|EEE73820.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 269/373 (72%), Positives = 313/373 (83%), Gaps = 19/373 (5%)

Query: 1   MESELKDLNSKQLK----STASSDDGGSAKDDRPLLKPDA-------ADNIQELEKKFAP 49
           M++ELK +N    K      AS DDG ++KDDRPLLK D+        ++I+ELEKKFA 
Sbjct: 1   MDTELKSMNPDPPKPEQPDPASRDDGSNSKDDRPLLKSDSNRISSTTGESIEELEKKFAA 60

Query: 50  YVRNDVYGTMGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNR 109
           YVRNDVYG MGRGELPL EK L+GIA+VTL+PIR VLA+ +LV+YY+ICRVCTLFSAPNR
Sbjct: 61  YVRNDVYGPMGRGELPLVEKVLLGIAVVTLVPIRFVLALIILVVYYIICRVCTLFSAPNR 120

Query: 110 GEDE-QEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQ 168
            E+E QED+AHMGGWRR+V+V  GRFLSR++LFVLGFYWI+ ++R +++ ++      N+
Sbjct: 121 DEEEEQEDFAHMGGWRRAVIVWCGRFLSRMLLFVLGFYWISVSYRDIELPDQ------NK 174

Query: 169 SKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCL 228
           S  ++E KDQ EE  R GAIISNHVSYLDILYHMS+SFPSFVAKRSVAKLPLVGLISKCL
Sbjct: 175 SSSQNEGKDQSEEPERLGAIISNHVSYLDILYHMSASFPSFVAKRSVAKLPLVGLISKCL 234

Query: 229 GCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFP-GTTTNGDYLLPFKTGAFL 287
           GCVYVQRESKSSDFKGVSG+VTERV+E+H + SAPMMMLFP GTTTNGD+LLPFKTGAFL
Sbjct: 235 GCVYVQRESKSSDFKGVSGIVTERVKESHENSSAPMMMLFPEGTTTNGDFLLPFKTGAFL 294

Query: 288 ARAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPK 347
           A APV PVILRYPYQRFSPAWDSISGA HVF+L CQF+NH+E   LPVY+PSQ+EKDDPK
Sbjct: 295 ATAPVRPVILRYPYQRFSPAWDSISGALHVFYLFCQFINHMEAVWLPVYYPSQEEKDDPK 354

Query: 348 LYAENVRRLMASE 360
           LYA NVRRLMA E
Sbjct: 355 LYASNVRRLMARE 367

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255538570\|ref\|XP_002510350.1\| acyltransferase, putative [Ricinus communis] gi\|223551051\|gb\|EEF52537.1\| acyltransferase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|356510241\|ref\|XP_003523848.1\| PREDICTED: 1-acylglycerophosphocholine O-acyltransferase 1-like [Glycine max]	Back alignment and taxonomy information

>gi\|224063595\|ref\|XP_002301219.1\| predicted protein [Populus trichocarpa] gi\|222842945\|gb\|EEE80492.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356518056\|ref\|XP_003527700.1\| PREDICTED: 1-acylglycerophosphocholine O-acyltransferase 1-like [Glycine max]	Back alignment and taxonomy information

>gi\|359492117\|ref\|XP_002283301.2\| PREDICTED: lysophosphatidylcholine acyltransferase 1-like [Vitis vinifera] gi\|302142453\|emb\|CBI19656.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|357511061\|ref\|XP_003625819.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Medicago truncatula] gi\|355500834\|gb\|AES82037.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|357511059\|ref\|XP_003625818.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Medicago truncatula] gi\|355500833\|gb\|AES82036.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|449469993\|ref\|XP_004152703.1\| PREDICTED: lysophosphatidylcholine acyltransferase 1-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449496062\|ref\|XP_004160027.1\| PREDICTED: lysophosphatidylcholine acyltransferase 1-like isoform 1 [Cucumis sativus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		375
TAIR\|locus:2025807		398	AT1G80950 [Arabidopsis thalian	0.936	0.881	0.647	2.5e-120
UNIPROTKB\|J9NSM6		485	LPCAT1 "Uncharacterized protei	0.456	0.352	0.407	2.6e-33
UNIPROTKB\|F1PJ28		534	LPCAT1 "Uncharacterized protei	0.461	0.323	0.391	3.4e-32
UNIPROTKB\|F1S029		534	LPCAT1 "Uncharacterized protei	0.456	0.320	0.407	1.8e-31
UNIPROTKB\|F1NME3		525	LPCAT1 "Uncharacterized protei	0.450	0.321	0.376	7.4e-31
ZFIN\|ZDB-GENE-030131-5777		508	lpcat4 "lysophosphatidylcholin	0.453	0.334	0.401	1.7e-30
UNIPROTKB\|Q8NF37		534	LPCAT1 "Lysophosphatidylcholin	0.456	0.320	0.391	3.1e-30
TAIR\|locus:2043639		539	AT2G45670 [Arabidopsis thalian	0.488	0.339	0.350	6.4e-30
ZFIN\|ZDB-GENE-060503-915		517	lpcat1 "lysophosphatidylcholin	0.450	0.326	0.384	1.8e-29
RGD\|1311599		534	Lpcat1 "lysophosphatidylcholin	0.456	0.320	0.385	2.4e-29

TAIR\|locus:2025807 AT1G80950 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1184 (421.8 bits), Expect = 2.5e-120, P = 2.5e-120
 Identities = 241/372 (64%), Positives = 277/372 (74%)

Query:     1 MESELKDLNSKQLXXXXXXXXXXXXXXXRPLLKP--DAADNIQELEKKFAPYVRNDVYGT 58
             MESELKDLNS                  RPLLK   D A  I+EL+KKFAPY R D+YGT
Sbjct:     1 MESELKDLNSNS--------NPPSSKEDRPLLKSESDLAAAIEELDKKFAPYARTDLYGT 52

Query:    59 MGRGELPLAEKFLIGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRG----EDE- 113
             MG G  P+ E   + +A+VTL+P+R +L+M++L++YYLICRV TLFSAP RG    EDE 
Sbjct:    53 MGLGPFPMTENIKLAVALVTLVPLRFLLSMSILLLYYLICRVFTLFSAPYRGPEEEEDEG 112

Query:   114 ----QEDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNXX 169
                 QEDYAHM GW+R+V+V +GRFLSRV+LFV GFYWI E+    D  +   N      
Sbjct:   113 GVVFQEDYAHMEGWKRTVIVRSGRFLSRVLLFVFGFYWIHESCPDRD-SDMDSNPKTTST 171

Query:   170 XXXXXXXXXXXXXGRPGAIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLG 229
                           RPGAI+SNHVSYLDILYHMS+SFPSFVAKRSV KLPLVGLISKCLG
Sbjct:   172 EINQKGEAATEEPERPGAIVSNHVSYLDILYHMSASFPSFVAKRSVGKLPLVGLISKCLG 231

Query:   230 CVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFP-GTTTNGDYLLPFKTGAFLA 288
             CVYVQRE+KS DFKGVSG V ERVREAH +KSAP +MLFP GTTTNGDYLL FKTGAFLA
Sbjct:   232 CVYVQREAKSPDFKGVSGTVNERVREAHSNKSAPTIMLFPEGTTTNGDYLLTFKTGAFLA 291

Query:   289 RAPVLPVILRYPYQRFSPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKL 348
               PVLPVIL+YPY+RFS AWD+ISGARH+ FLLCQ VNH+EV  LPVY+PSQ+EKDDPKL
Sbjct:   292 GTPVLPVILKYPYERFSVAWDTISGARHILFLLCQVVNHLEVIRLPVYYPSQEEKDDPKL 351

Query:   349 YAENVRRLMASE 360
             YA NVR+LMA+E
Sbjct:   352 YASNVRKLMATE 363

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008152 "metabolic process" evidence=IEA;ISS

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA;ISS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA

UNIPROTKB\|J9NSM6 LPCAT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|F1PJ28 LPCAT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|F1S029 LPCAT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NME3 LPCAT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-030131-5777 lpcat4 "lysophosphatidylcholine acyltransferase 4" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|Q8NF37 LPCAT1 "Lysophosphatidylcholine acyltransferase 1" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

TAIR\|locus:2043639 AT2G45670 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-060503-915 lpcat1 "lysophosphatidylcholine acyltransferase 1" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

RGD\|1311599 Lpcat1 "lysophosphatidylcholine acyltransferase 1" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.3.1.51	LOW CONFIDENCE prediction!
3rd Layer	2.3.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00400170	hypothetical protein (402 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.II.814.1	hypothetical protein (534 aa)	•	•	•	0.901
	gw1.XIV.942.1	hypothetical protein (382 aa)	•	•	•	0.901
	gw1.XVIII.245.1	SubName- Full=Putative uncharacterized protein; (138 aa)	•			0.899
	gw1.XVI.1394.1	hypothetical protein (823 aa)	•			0.899
	gw1.IX.3095.1	hypothetical protein (501 aa)	•			0.899
	gw1.I.9205.1	hypothetical protein (822 aa)	•			0.899
	gw1.40.286.1	phospholipase A1 (EC-3.1.1.32) (357 aa)	•			0.899
	gw1.1077.3.1	annotation not avaliable (431 aa)	•			0.899
	grail3.0068004901	hypothetical protein (535 aa)	•			0.899
	grail3.0005029501	hypothetical protein (517 aa)	•			0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		375
cd07991		211	cd07991, LPLAT_LPCAT1-like, Lysophospholipid Acylt	3e-72
cd07989		184	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltr	5e-22
smart00563		118	smart00563, PlsC, Phosphate acyltransferases	5e-21
pfam01553		131	pfam01553, Acyltransferase, Acyltransferase	5e-18
TIGR00530		130	TIGR00530, AGP_acyltrn, 1-acyl-sn-glycerol-3-phosp	1e-16
COG0204		255	COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyl	2e-15
PLN02833		376	PLN02833, PLN02833, glycerol acyltransferase famil	2e-07
PLN02901		214	PLN02901, PLN02901, 1-acyl-sn-glycerol-3-phosphate	9e-07
cd06551		187	cd06551, LPLAT, Lysophospholipid acyltransferases	3e-06
PRK15018		245	PRK15018, PRK15018, 1-acyl-sn-glycerol-3-phosphate	5e-06
cd07992		203	cd07992, LPLAT_AAK14816-like, Lysophospholipid Acy	4e-04
cd07990		193	cd07990, LPLAT_LCLAT1-like, Lysophospholipid Acylt	0.001

>gnl\|CDD\|153253 cd07991, LPLAT_LPCAT1-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like	Back alignment and domain information

 Score =  224 bits (572), Expect = 3e-72
 Identities = 84/226 (37%), Positives = 115/226 (50%), Gaps = 36/226 (15%)

Query: 137 RVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYL 196
           RV+LF  GFY I                             + +    P  I++NH S++
Sbjct: 2   RVLLFAFGFYVIKV-------------------------HGKPDPPEAPRIIVANHTSFI 36

Query: 197 DILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREA 256
           D L   S  FPS VAK+ + KLP +G I + LGC++V R             V E ++E 
Sbjct: 37  DPLILFSDLFPSIVAKKELGKLPFIGTILRALGCIFVDRSEPKD-----RKKVVEEIKER 91

Query: 257 HRDKSAPMMMLFP-GTTTNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWDSISGA- 314
             D + P +++FP GTTTNG  L+ FK GAF    PV PV +RYP  +F  A+ + SG  
Sbjct: 92  ATDPNWPPILIFPEGTTTNGKALIMFKKGAFEPGVPVQPVAIRYPN-KFVDAFWNSSGYS 150

Query: 315 --RHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYAENVRRLMA 358
              ++F LL Q  N +EV  LPVY PS +E +DPK +A  VR +MA
Sbjct: 151 SLMYLFRLLTQPANVLEVEFLPVYTPS-EEGEDPKEFANRVRLIMA 195

Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences. Length = 211

>gnl\|CDD\|153251 cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	Back alignment and domain information

>gnl\|CDD\|214724 smart00563, PlsC, Phosphate acyltransferases	Back alignment and domain information

>gnl\|CDD\|216567 pfam01553, Acyltransferase, Acyltransferase	Back alignment and domain information

>gnl\|CDD\|129621 TIGR00530, AGP_acyltrn, 1-acyl-sn-glycerol-3-phosphate acyltransferases	Back alignment and domain information

>gnl\|CDD\|223282 COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]	Back alignment and domain information

>gnl\|CDD\|215447 PLN02833, PLN02833, glycerol acyltransferase family protein	Back alignment and domain information

>gnl\|CDD\|215488 PLN02901, PLN02901, 1-acyl-sn-glycerol-3-phosphate acyltransferase	Back alignment and domain information

>gnl\|CDD\|153244 cd06551, LPLAT, Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis	Back alignment and domain information

>gnl\|CDD\|184979 PRK15018, PRK15018, 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional	Back alignment and domain information

>gnl\|CDD\|153254 cd07992, LPLAT_AAK14816-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like	Back alignment and domain information

>gnl\|CDD\|153252 cd07990, LPLAT_LCLAT1-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		375
PLN02833		376	glycerol acyltransferase family protein	100.0
KOG2848		276	consensus 1-acyl-sn-glycerol-3-phosphate acyltrans	100.0
cd07991		211	LPLAT_LPCAT1-like Lysophospholipid Acyltransferase	100.0
PRK15018		245	1-acyl-sn-glycerol-3-phosphate acyltransferase; Pr	100.0
KOG4666		412	consensus Predicted phosphate acyltransferase, con	99.95
PTZ00261		355	acyltransferase; Provisional	99.94
PLN02901		214	1-acyl-sn-glycerol-3-phosphate acyltransferase	99.93
PLN02177		497	glycerol-3-phosphate acyltransferase	99.92
PLN02588		525	glycerol-3-phosphate acyltransferase	99.92
PLN02499		498	glycerol-3-phosphate acyltransferase	99.92
cd07988		163	LPLAT_ABO13168-like Lysophospholipid Acyltransfera	99.91
PRK14014		301	putative acyltransferase; Provisional	99.9
cd07993		205	LPLAT_DHAPAT-like Lysophospholipid Acyltransferase	99.89
cd07992		203	LPLAT_AAK14816-like Lysophospholipid Acyltransfera	99.89
COG0204		255	PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferas	99.89
PLN02783		315	diacylglycerol O-acyltransferase	99.88
cd07986		210	LPLAT_ACT14924-like Lysophospholipid Acyltransfera	99.86
PRK08043		718	bifunctional acyl-[acyl carrier protein] synthetas	99.85
PRK06814		1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.83
PRK08633		1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.83
cd07987		212	LPLAT_MGAT-like Lysophospholipid Acyltransferases	99.82
PRK03355		783	glycerol-3-phosphate acyltransferase; Validated	99.8
PLN02510		374	probable 1-acyl-sn-glycerol-3-phosphate acyltransf	99.8
PLN02380		376	1-acyl-sn-glycerol-3-phosphate acyltransferase	99.78
TIGR03703		799	plsB glycerol-3-phosphate O-acyltransferase. Membe	99.76
PRK04974		818	glycerol-3-phosphate acyltransferase; Validated	99.75
TIGR00530		130	AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltra	99.74
cd06551		187	LPLAT Lysophospholipid acyltransferases (LPLATs) o	99.73
cd07985		235	LPLAT_GPAT Lysophospholipid Acyltransferases (LPLA	99.71
cd07983		189	LPLAT_DUF374-like Lysophospholipid Acyltransferase	99.7
PTZ00374		1108	dihydroxyacetone phosphate acyltransferase; Provis	99.7
PF01553		132	Acyltransferase: Acyltransferase; InterPro: IPR002	99.7
cd07990		193	LPLAT_LCLAT1-like Lysophospholipid Acyltransferase	99.68
cd07989		184	LPLAT_AGPAT-like Lysophospholipid Acyltransferases	99.67
smart00563		118	PlsC Phosphate acyltransferases. Function in phosp	99.66
KOG4666		412	consensus Predicted phosphate acyltransferase, con	99.63
PRK11915		621	glycerol-3-phosphate acyltransferase; Reviewed	99.6
KOG2898		354	consensus Predicted phosphate acyltransferase, con	99.42
KOG1505		346	consensus Lysophosphatidic acid acyltransferase LP	99.34
cd07984		192	LPLAT_LABLAT-like Lysophospholipid Acyltransferase	99.29
KOG2847		286	consensus Phosphate acyltransferase [Lipid transpo	99.12
COG2937		810	PlsB Glycerol-3-phosphate O-acyltransferase [Lipid	98.86
KOG3729		715	consensus Mitochondrial glycerol-3-phosphate acylt	98.82
KOG3730		685	consensus Acyl-CoA:dihydroxyactetone-phosphate acy	98.5
PRK08419		298	lipid A biosynthesis lauroyl acyltransferase; Revi	98.08
COG2121		214	Uncharacterized protein conserved in bacteria [Fun	97.61
PRK07920		298	lipid A biosynthesis lauroyl acyltransferase; Prov	97.23
PLN02349		426	glycerol-3-phosphate acyltransferase	97.23
PF03279		295	Lip_A_acyltrans: Bacterial lipid A biosynthesis ac	96.23
PF03982		297	DAGAT: Diacylglycerol acyltransferase ; InterPro:	94.9
COG1560		308	HtrB Lauroyl/myristoyl acyltransferase [Cell envel	94.6
KOG0831		334	consensus Acyl-CoA:diacylglycerol acyltransferase	93.94
PRK06553		308	lipid A biosynthesis lauroyl acyltransferase; Prov	93.89
PRK05646		310	lipid A biosynthesis lauroyl acyltransferase; Prov	92.08
COG3176		292	Putative hemolysin [General function prediction on	90.66
PRK06946		293	lipid A biosynthesis lauroyl acyltransferase; Prov	89.63
PRK08706		289	lipid A biosynthesis lauroyl acyltransferase; Prov	89.58
PRK06628		290	lipid A biosynthesis lauroyl acyltransferase; Prov	89.36
TIGR02207		303	lipid_A_htrB lipid A biosynthesis lauroyl (or palm	89.1
PRK08905		289	lipid A biosynthesis lauroyl acyltransferase; Vali	89.02
PRK06860		309	lipid A biosynthesis lauroyl acyltransferase; Prov	88.98
TIGR02208		305	lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)	88.54
PRK08025		305	lipid A biosynthesis palmitoleoyl acyltransferase;	88.37
PRK05906		454	lipid A biosynthesis lauroyl acyltransferase; Prov	87.64
PRK15174		656	Vi polysaccharide export protein VexE; Provisional	86.87
PRK08734		305	lipid A biosynthesis lauroyl acyltransferase; Prov	84.1
PRK08943		314	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA ac	83.89
PRK08733		306	lipid A biosynthesis lauroyl acyltransferase; Prov	83.53
PRK05645		295	lipid A biosynthesis lauroyl acyltransferase; Prov	82.37

>PLN02833 glycerol acyltransferase family protein	Back alignment and domain information

Probab=100.00  E-value=1.2e-35  Score=290.10  Aligned_cols=276  Identities=18%  Similarity=0.247  Sum_probs=203.5

Q ss_pred             cHHHHhhccCCceecCCCCCCCCCCCCHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Q 017250           39 NIQELEKKFAPYVRNDVYGTMGRGELPLAEKFL----IGIAMVTLLPIRVVLAMTVLVIYYLICRVCTLFSAPNRGEDEQ  114 (375)
Q Consensus        39 ~~~~~~~k~~~f~r~~~~g~~~~~~~~~~~~~~----~~~~~~~L~plRl~~~~~~l~~~~l~~~l~~l~~~~~~~~~~~  114 (375)
                      .+||+.++|++-.-..  +++     ..++.+.    .++...+|+|+|++++++.++.+.++..++.++...       
T Consensus        60 ~dd~~~~~f~~~~~~~--~n~-----~~~l~~~w~~g~~~ry~~L~p~R~~~~~~~~~~~~~~~~~v~~~~~~-------  125 (376)
T PLN02833         60 VDDSFTRCFKSNPPEP--WNW-----NIYLFPLWCVGVVIRYGILFPVRVLLLAIGWIIFLSAFIPVHFLLKG-------  125 (376)
T ss_pred             hhhhhhhccCCCCCCC--cch-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-------
Confidence            5578999999877633  122     2222211    223356799999999998776665554444333211       


Q ss_pred             cccccccchhhHHHHHHHHHHHHHHHHHhCeEEEEEeeeecchhhhhhhhhhccCCccccccccCCCCCCCeEEEecCCc
Q 017250          115 EDYAHMGGWRRSVVVVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVS  194 (375)
Q Consensus       115 ~~~~~l~~~rr~l~~~~~~~~~r~~l~~~G~~~i~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~vivsNH~S  194 (375)
                            ...++.+...+.+.+++.++...+. .|+++|...                         .++++.|+||||+|
T Consensus       126 ------~~~r~~~~r~~v~~~~~~~~~~~~~-~i~v~G~e~-------------------------~~~~~~IiVaNH~S  173 (376)
T PLN02833        126 ------HKLRKKIERKLVELICSAFVASWTG-VIKYHGPRP-------------------------SRRPKQVFVANHTS  173 (376)
T ss_pred             ------hHHHHHHHHHHHHHHHHHHHHHhEE-EEEEECCcC-------------------------CCCCCEEEEECCCC
Confidence                  1223344445555565544433332 256665321                         24567999999999


Q ss_pred             cchhhhhccccCceEEEccccccccHHH-HHHHhcCceEEecCCCccchhhhHHHHHHHHHHHHhCCCCCeEEEee-Ccc
Q 017250          195 YLDILYHMSSSFPSFVAKRSVAKLPLVG-LISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDKSAPMMMLFP-GTT  272 (375)
Q Consensus       195 ~lD~l~l~~~~~~~fvak~~l~~~p~~g-~~~~~~g~i~v~R~~~~~~~~~~~~~~~~~l~~~~~~~~g~~v~IFP-GT~  272 (375)
                      ++|++++.+..+..+++|++....++++ ++++..|+++|+|++..+ .+    .+.+.+++..++++|.+|+||| |||
T Consensus       174 ~lDi~vL~s~~p~~~v~kk~~~~~~~~~~~~~~~~g~I~VdR~~~~~-~~----~~~~~l~~~l~~~~G~~llIFPEGTr  248 (376)
T PLN02833        174 MIDFIVLEQMTPFAVIMQKHPGWVGFLQNTILESVGCIWFNRTEAKD-RE----VVAKKLRDHVQDPDRNPLLIFPEGTC  248 (376)
T ss_pred             hHHHHHHHhhcCceEEEEehhhhhHHHHHHHHHHcCcEEecCCCHHH-HH----HHHHHHHHHHHhcCCCEEEEEcCccc
Confidence            9999999988888889998887776654 899999999999976533 22    3455566655555678999999 999


Q ss_pred             cCCCCccccccccccCCCCEEEEEEECCCCCCCCCcc--CcchhhHHHHHhhcCccEEEEEEcCccCCCCCCCCCHHHHH
Q 017250          273 TNGDYLLPFKTGAFLARAPVLPVILRYPYQRFSPAWD--SISGARHVFFLLCQFVNHIEVTSLPVYHPSQQEKDDPKLYA  350 (375)
Q Consensus       273 sn~~~ll~Fk~Gaf~~~~pV~PV~i~y~~~~~~~~w~--~~~~~~~l~~~l~~~~~~v~V~~lppi~p~~~~~~~~~~la  350 (375)
                      ++++.+++||+|+|..++|||||+|+|+.......|.  ..++..+++++|+++...++|+++||+++.  +.+++++||
T Consensus       249 s~~~~l~~FK~Gaf~~g~pI~PVaI~y~~~~~~~fW~s~~~s~~~~l~~ll~~~~~~v~V~~LpPi~~~--~~e~~~efA  326 (376)
T PLN02833        249 VNNEYTVMFKKGAFELGCTVCPIAIKYNKIFVDAFWNSRKQSFTMHLLRLMTSWAVVCDVWYLEPQTLR--PGETPIEFA  326 (376)
T ss_pred             cCCCcccccchhhHhcCCeEEEEEEEecCcccccccCCCCccHHHhHHHHhCCCceEEEEEECCCcCCC--CCCCHHHHH
Confidence            9999999999999999999999999999766666785  467788999999999999999999999875  357899999


Q ss_pred             HHHHHHHHHHhCCCccc
Q 017250          351 ENVRRLMASEVWISSFT  367 (375)
Q Consensus       351 ~~vr~~ma~~l~~~~~~  367 (375)
                      +++++.|++++|+.+..
T Consensus       327 ~rv~~~Ia~~lgi~~~~  343 (376)
T PLN02833        327 ERVRDMIAKRAGLKKVP  343 (376)
T ss_pred             HHHHHHHHHhcCCCCCC
Confidence            99999999999996544

>KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]	Back alignment and domain information

>cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like	Back alignment and domain information

>PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional	Back alignment and domain information

>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]	Back alignment and domain information

>PTZ00261 acyltransferase; Provisional	Back alignment and domain information

>PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PLN02177 glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PLN02588 glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PLN02499 glycerol-3-phosphate acyltransferase	Back alignment and domain information

>cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168	Back alignment and domain information

>PRK14014 putative acyltransferase; Provisional	Back alignment and domain information

>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like	Back alignment and domain information

>cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like	Back alignment and domain information

>COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]	Back alignment and domain information

>PLN02783 diacylglycerol O-acyltransferase	Back alignment and domain information

>cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924	Back alignment and domain information

>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated	Back alignment and domain information

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional	Back alignment and domain information

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated	Back alignment and domain information

>cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	Back alignment and domain information

>PRK03355 glycerol-3-phosphate acyltransferase; Validated	Back alignment and domain information

>PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase	Back alignment and domain information

>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase	Back alignment and domain information

>PRK04974 glycerol-3-phosphate acyltransferase; Validated	Back alignment and domain information

>TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases	Back alignment and domain information

>cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis	Back alignment and domain information

>cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT	Back alignment and domain information

>cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374	Back alignment and domain information

>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional	Back alignment and domain information

>PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function []	Back alignment and domain information

>cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like	Back alignment and domain information

>cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	Back alignment and domain information

>smart00563 PlsC Phosphate acyltransferases	Back alignment and domain information

>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]	Back alignment and domain information

>PRK11915 glycerol-3-phosphate acyltransferase; Reviewed	Back alignment and domain information

>KOG2898 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]	Back alignment and domain information

>KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism]	Back alignment and domain information

>cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like	Back alignment and domain information

>KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism]	Back alignment and domain information

>COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism]	Back alignment and domain information

>KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism]	Back alignment and domain information

>KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism]	Back alignment and domain information

>PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed	Back alignment and domain information

>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PLN02349 glycerol-3-phosphate acyltransferase	Back alignment and domain information

>PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria	Back alignment and domain information

>PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ]	Back alignment and domain information

>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>KOG0831 consensus Acyl-CoA:diacylglycerol acyltransferase (DGAT) [Lipid transport and metabolism]	Back alignment and domain information

>PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>COG3176 Putative hemolysin [General function prediction only]	Back alignment and domain information

>PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase	Back alignment and domain information

>PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated	Back alignment and domain information

>PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	Back alignment and domain information

>PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed	Back alignment and domain information

>PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK15174 Vi polysaccharide export protein VexE; Provisional	Back alignment and domain information

>PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated	Back alignment and domain information

>PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

>PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		375
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 48.7 bits (115), Expect = 3e-06
 Identities = 38/257 (14%), Positives = 75/257 (29%), Gaps = 75/257 (29%)

Query: 148 ITETFRILDVQEKSENEAKNQSKDEDEAKDQD-------EESGRPGAIISNHVSYLDILY 200
           ++ T R+       + E   +  +E    +          E  +P  +   ++   D LY
Sbjct: 61  VSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120

Query: 201 HMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTERVREAHRDK 260
           + +  F     K +V++L     + + L       E + +    + G             
Sbjct: 121 NDNQVFA----KYNVSRLQPYLKLRQAL------LELRPAKNVLIDG------------- 157

Query: 261 SAPMMMLFPGTTTNGDYLLPFKTGAFLARAPVL---PVILRYPYQRFSPAWDSISGARHV 317
              +     G+   G      KT  ++A   V     V  +  ++ F   W ++      
Sbjct: 158 ---V----LGS---G------KT--WVA-LDVCLSYKVQCKMDFKIF---WLNLKNCNSP 195

Query: 318 FFLLCQFVN---HIEVTSLPVYHPSQQEKDDPKLYAENVRRLMASE-----------VWI 363
             +L         I+         S   K         +RRL+ S+           V  
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN 255

Query: 364 SSFTKA------ELLTS 374
           +    A       LLT+
Sbjct: 256 AKAWNAFNLSCKILLTT 272

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		375
1iuq_A		367	Glycerol-3-phosphate acyltransferase; open twisted	99.77

>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A	Back alignment and structure

Probab=99.77  E-value=5.3e-20  Score=175.80  Aligned_cols=203  Identities=16%  Similarity=0.134  Sum_probs=129.8

Q ss_pred             HHHHHHHHHHHHHHhCeEEEEEeeeecchhhhhhhhhhccCCccccccccCCCCCCCeEEEecCCccchhhhhcccc---
Q 017250          129 VVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSS---  205 (375)
Q Consensus       129 ~~~~~~~~r~~l~~~G~~~i~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~vivsNH~S~lD~l~l~~~~---  205 (375)
                      +.+++.|.|.++...|.   +|.|....        .++         .+..+.++++|++|||+|.+|++++....   
T Consensus        95 y~~~~~~ir~li~~~~s---~V~G~e~~--------~~~---------~E~l~~~~~vIfisNHQS~~D~~vi~~~l~~~  154 (367)
T 1iuq_A           95 YIFGQNYIRPLIDFGNS---FVGNLSLF--------KDI---------EEKLQQGHNVVLISNHQTEADPAIISLLLEKT  154 (367)
T ss_dssp             HHHHHHHHGGGBCGGGC---EEECHHHH--------HHH---------HHHHHTTCEEEEEECCCCTTHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHhhcCC---Eeecchhh--------hhH---------HhhccCCCcEEEEECCccchhHHHHHHHHhhc
Confidence            45677778877777776   46664432        010         11234668999999999999999887765   


Q ss_pred             ------CceEEEccccccccHHHHHH--HhcCceEE----e------cCCCccchhhhHHHHHHHHHHHHhCCCCCeEEE
Q 017250          206 ------FPSFVAKRSVAKLPLVGLIS--KCLGCVYV----Q------RESKSSDFKGVSGVVTERVREAHRDKSAPMMML  267 (375)
Q Consensus       206 ------~~~fvak~~l~~~p~~g~~~--~~~g~i~v----~------R~~~~~~~~~~~~~~~~~l~~~~~~~~g~~v~I  267 (375)
                            ..+||||+++...|+...+.  +.++||+.    +      |.+.+.+.+.+ .++.+.+++     .|..|+|
T Consensus       155 ~~~l~~~~~fVAk~eL~~~Pl~~Pfs~g~~l~cI~~kk~id~~p~l~r~~~r~n~ksl-~~~~~~Lk~-----GG~sI~I  228 (367)
T 1iuq_A          155 NPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSL-KEMALLLRG-----GSQLIWI  228 (367)
T ss_dssp             CHHHHHHCEEEECTHHHHCTTTHHHHHTSEEEECCCGGGTTSSGGGHHHHHHHHHHHH-HHHHHHHHH-----CCCEEEE
T ss_pred             ccccccceEEEeehhhhcCccccchhhhhheeeEEecccCCCcchhhhhhhHHHHHHH-HHHHHHHHc-----CCeEEEE
Confidence                  46999999999777663321  44567776    3      32221122211 122222222     2568999


Q ss_pred             ee-CcccCC----CC--ccccccccc----c----CCCC--EEEEEEECCCCCCCCC-ccCcchhhHHHHHhhcCccEEE
Q 017250          268 FP-GTTTNG----DY--LLPFKTGAF----L----ARAP--VLPVILRYPYQRFSPA-WDSISGARHVFFLLCQFVNHIE  329 (375)
Q Consensus       268 FP-GT~sn~----~~--ll~Fk~Gaf----~----~~~p--V~PV~i~y~~~~~~~~-w~~~~~~~~l~~~l~~~~~~v~  329 (375)
                      || |||+++    +.  ..+||+|+|    .    +++|  |+||+|. ++..+++. -..    ..+..-....++.|.
T Consensus       229 FPEGTRsR~~~~~g~l~~~~Fk~gs~~~~~~LA~ksg~P~hIvPvaI~-t~~imppp~~ve----~~~g~~r~i~~~~V~  303 (367)
T 1iuq_A          229 APSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALL-CHDIMPPPSQVE----IEIGEKRVIAFNGAG  303 (367)
T ss_dssp             CTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEE-CGGGSCCC--------------CCCCCBCCE
T ss_pred             eCCCCCCCCCCCCCccccccccchhhhHHHHHHHHcCCCceEEEEEEE-eccccCCccccc----ccccccceeecccEE
Confidence            99 999995    34  455999998    3    8999  9999999 66655431 000    000000012357899


Q ss_pred             EEEcCccCCCCCC------CCCHHHHHHHHHHHHHHHhC
Q 017250          330 VTSLPVYHPSQQE------KDDPKLYAENVRRLMASEVW  362 (375)
Q Consensus       330 V~~lppi~p~~~~------~~~~~~la~~vr~~ma~~l~  362 (375)
                      |.+++||++++..      +++.+.+++.|++.|++.++
T Consensus       304 v~ig~pI~~~~l~~~~e~~~e~~~~l~e~v~~~I~~~y~  342 (367)
T 1iuq_A          304 LSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYN  342 (367)
T ss_dssp             EEECCCCCHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEECCccchhhccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999976532      22345799999999988774

PyMOL of 1iuq

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		375
d1iuqa_		367	c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransf	7e-05

>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} Length = 367	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: Glycerol-3-phosphate (1)-acyltransferase
superfamily: Glycerol-3-phosphate (1)-acyltransferase
family: Glycerol-3-phosphate (1)-acyltransferase
domain: Glycerol-3-phosphate (1)-acyltransferase
species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]

 Score = 41.9 bits (98), Expect = 7e-05
 Identities = 23/142 (16%), Positives = 40/142 (28%), Gaps = 27/142 (19%)

Query: 181 ESGRPGAIISNHVSYLD------ILYHMSSSFP---SFVAKRSVAKLPLVGLISKCLGCV 231
           + G    +ISNH +  D      +L   +        FVA   V   PL    S     +
Sbjct: 127 QQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLI 186

Query: 232 YVQRESKSSDFKGVSGVVT----ERVREAHRDKSAP--MMMLFPGTTTNGD-------YL 278
            V  +    D   ++          ++E          ++ + P    +         Y 
Sbjct: 187 CVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYP 246

Query: 279 LPFKTG-----AFLARAPVLPV 295
            PF          L +   +P 
Sbjct: 247 APFDASSVDNMRRLIQHSDVPG 268

PyMOL of d1iuqa_

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		375
d1iuqa_		367	Glycerol-3-phosphate (1)-acyltransferase {Cushaw s	99.6

>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Glycerol-3-phosphate (1)-acyltransferase
superfamily: Glycerol-3-phosphate (1)-acyltransferase
family: Glycerol-3-phosphate (1)-acyltransferase
domain: Glycerol-3-phosphate (1)-acyltransferase
species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]

Probab=99.60  E-value=1.7e-16  Score=151.07  Aligned_cols=177  Identities=18%  Similarity=0.143  Sum_probs=110.7

Q ss_pred             CCCCCCCeEEEecCCccchhhhhcccc---------CceEEEccccccccHHHHHHHhcCceEEecCCCccch-------
Q 017250          179 DEESGRPGAIISNHVSYLDILYHMSSS---------FPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDF-------  242 (375)
Q Consensus       179 ~~~~~~~~vivsNH~S~lD~l~l~~~~---------~~~fvak~~l~~~p~~g~~~~~~g~i~v~R~~~~~~~-------  242 (375)
                      ..+..+++|++|||+|++|+.++..+.         ...|++|++++..|++++++...|+|+|+|.+.-.+.       
T Consensus       125 kl~~g~nVIlvSNHqS~~D~~il~~ll~~~~~~l~r~i~f~Ak~~l~~~Pl~~~f~~~~g~I~V~rk~~i~~~p~l~~~~  204 (367)
T d1iuqa_         125 KLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETK  204 (367)
T ss_dssp             HHHTTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHHHHCTTTHHHHHTSEEEECCCGGGTTSSGGGHHHH
T ss_pred             HhcCCCCEEEEECCcccccHHHHHHHHhccccccccceEEEeehhhhccHHHHHHHHhCCEEEEeccccccccccccchh
Confidence            346677899999999999998875442         2489999999999999999999999999986432111       


Q ss_pred             -hhhHHHHHHHHHHHHhCCCCCeEEEee-CcccC----CCCcc--cccccc----c----cCCCC--EEEEEEECCCCCC
Q 017250          243 -KGVSGVVTERVREAHRDKSAPMMMLFP-GTTTN----GDYLL--PFKTGA----F----LARAP--VLPVILRYPYQRF  304 (375)
Q Consensus       243 -~~~~~~~~~~l~~~~~~~~g~~v~IFP-GT~sn----~~~ll--~Fk~Ga----f----~~~~p--V~PV~i~y~~~~~  304 (375)
                       +.-.+.+.+.++ .+..+ +..|+||| |||++    ++.+.  +|+++.    +    .+++|  |+||++.++....
T Consensus       205 ~~~~~~al~~~~~-lL~~G-g~~v~IfPEGTRsr~~~~dg~l~p~~F~~~~~~~~~~LA~~sgvP~hV~Pvai~~~d~~p  282 (367)
T d1iuqa_         205 RKANTRSLKEMAL-LLRGG-SQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLCHDIMP  282 (367)
T ss_dssp             HHHHHHHHHHHHH-HHHHC-CCEEEECTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEECGGGSC
T ss_pred             hhhhhHHHHHHHH-HhhcC-CeEEEEeccCcccCcccccccccccccCccchHHHHHHHhcCCCCceEechhhhcccccC
Confidence             111111222222 22222 34688999 99985    33443  577775    2    28999  9999999876544


Q ss_pred             CCCccCcchhhHHHHHhhcCccEEEEEEcCccCCCCC--CCCCH----HHHHHHHHHHHHHHh
Q 017250          305 SPAWDSISGARHVFFLLCQFVNHIEVTSLPVYHPSQQ--EKDDP----KLYAENVRRLMASEV  361 (375)
Q Consensus       305 ~~~w~~~~~~~~l~~~l~~~~~~v~V~~lppi~p~~~--~~~~~----~~la~~vr~~ma~~l  361 (375)
                      ++....    ..+...-....+.+.|.+++||+.++.  ..++.    +.+.+.+.+.+++..
T Consensus       283 P~~~v~----~~ige~R~~~~~~V~i~~G~pId~~~~~~~~~~~~e~~ea~~k~l~d~v~eq~  341 (367)
T d1iuqa_         283 PPSQVE----IEIGEKRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQY  341 (367)
T ss_dssp             CC--------------CCCCCBCCEEEECCCCCHHHHHHTSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccc----cchhhccccCCCceeEEeCCCcchhhhhhhccchHHHHHHHHHHHHHHHHHHH
Confidence            432110    000001112346799999999986543  12333    344555555555544

PyMOL of d1iuqa_