Citrus Sinensis ID: 017277
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 374 | ||||||
| 224142341 | 344 | predicted protein [Populus trichocarpa] | 0.906 | 0.985 | 0.666 | 1e-133 | |
| 225445767 | 372 | PREDICTED: progestin and adipoq receptor | 0.946 | 0.951 | 0.598 | 1e-125 | |
| 449457861 | 361 | PREDICTED: progestin and adipoq receptor | 0.914 | 0.947 | 0.605 | 1e-123 | |
| 356500693 | 341 | PREDICTED: adiponectin receptor protein | 0.893 | 0.979 | 0.603 | 1e-121 | |
| 147816024 | 553 | hypothetical protein VITISV_008489 [Viti | 0.957 | 0.647 | 0.589 | 1e-120 | |
| 30688829 | 358 | heptahelical transmembrane protein2 [Ara | 0.943 | 0.986 | 0.606 | 1e-119 | |
| 297798884 | 360 | hypothetical protein ARALYDRAFT_491666 [ | 0.949 | 0.986 | 0.604 | 1e-119 | |
| 312282983 | 353 | unnamed protein product [Thellungiella h | 0.863 | 0.915 | 0.626 | 1e-119 | |
| 18377749 | 358 | unknown protein [Arabidopsis thaliana] | 0.943 | 0.986 | 0.604 | 1e-119 | |
| 356562541 | 340 | PREDICTED: adiponectin receptor protein | 0.898 | 0.988 | 0.604 | 1e-118 |
| >gi|224142341|ref|XP_002324517.1| predicted protein [Populus trichocarpa] gi|222865951|gb|EEF03082.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/351 (66%), Positives = 278/351 (79%), Gaps = 12/351 (3%)
Query: 23 EKSKNKKNDYMIMKKEKRLVKFQELPDYMKDNEYILDYYRCEWPLKDACLSVFSWHNETL 82
EK++ KN MKK RL+ ++ELPDY++DNEYILDYYRCEWPLKDA SVFSWHNETL
Sbjct: 3 EKTEKVKNSKQRMKKRSRLLAYKELPDYLQDNEYILDYYRCEWPLKDAFFSVFSWHNETL 62
Query: 83 NIWTHLVGFFIFAVLVVMSSMEKLELESSFIMKKFFSRPGEIFGPFVPMMMMK-NDTMNV 141
N+WTHL GF IF L+V+S ME+ E+ + FSR ++ GP + +MMMK N +N
Sbjct: 63 NVWTHLGGFLIFLGLLVLSFMEE-STENIEGLITSFSR-AKVSGPLMTLMMMKKNQDLND 120
Query: 142 SDNHMMFPGSLMNNITEPSGFHIREQVTQEVIPKWPWFVFLFGAMGCLICSSLSHLLACH 201
S LM +I++ S FH ++ + +VIP+WPWFVFL GAM CL+CSSLSHLLACH
Sbjct: 121 S--------VLMRHISQQSVFH-KQDGSDKVIPRWPWFVFLSGAMMCLVCSSLSHLLACH 171
Query: 202 SRRFNIFFWRLDYAGISLMIVSSFFAPIYYTFYCHPQTRFLYLTSITTLGILAIITLLAP 261
S+RFN+FFWRLDYAGISLMIV SFFAPIYY FYC+P RF YLTSIT LG+LAIITLLAP
Sbjct: 172 SKRFNLFFWRLDYAGISLMIVCSFFAPIYYAFYCNPYPRFFYLTSITVLGVLAIITLLAP 231
Query: 262 GLSSPRFRSFRASLFLAMGFSGVIPATHALILHWGHPHVYISLGYELAMAVLYSVGAGFY 321
S+PRFR FRA+LFL MGFSGVIPA HA++LHWGHPH+++SLGYEL MA+ Y+ G GFY
Sbjct: 232 VFSTPRFRPFRATLFLIMGFSGVIPAAHAVVLHWGHPHIFVSLGYELVMAIFYTAGVGFY 291
Query: 322 VGRIPERWKPGAFDIAGHSHQIFHVFVVLGALAHCAATLFIMDFRQGSPPC 372
+ RIPER KPGAFDIAGHSHQIFHVFVVL AL+HCAATL +MDFR+ SP C
Sbjct: 292 ITRIPERLKPGAFDIAGHSHQIFHVFVVLAALSHCAATLVMMDFRRRSPAC 342
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225445767|ref|XP_002274323.1| PREDICTED: progestin and adipoq receptor-like protein 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449457861|ref|XP_004146666.1| PREDICTED: progestin and adipoq receptor-like protein 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356500693|ref|XP_003519166.1| PREDICTED: adiponectin receptor protein 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|147816024|emb|CAN61543.1| hypothetical protein VITISV_008489 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|30688829|ref|NP_194814.2| heptahelical transmembrane protein2 [Arabidopsis thaliana] gi|42573093|ref|NP_974643.1| heptahelical transmembrane protein2 [Arabidopsis thaliana] gi|30385618|gb|AAP23168.1| HHP2 [Arabidopsis thaliana] gi|60543323|gb|AAX22259.1| At4g30850 [Arabidopsis thaliana] gi|94442447|gb|ABF19011.1| At4g30850 [Arabidopsis thaliana] gi|332660419|gb|AEE85819.1| heptahelical transmembrane protein2 [Arabidopsis thaliana] gi|332660420|gb|AEE85820.1| heptahelical transmembrane protein2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297798884|ref|XP_002867326.1| hypothetical protein ARALYDRAFT_491666 [Arabidopsis lyrata subsp. lyrata] gi|297313162|gb|EFH43585.1| hypothetical protein ARALYDRAFT_491666 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|312282983|dbj|BAJ34357.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
|---|
| >gi|18377749|gb|AAL67024.1| unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|356562541|ref|XP_003549528.1| PREDICTED: adiponectin receptor protein 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 374 | ||||||
| TAIR|locus:2126709 | 358 | HHP2 "heptahelical transmembra | 0.879 | 0.918 | 0.563 | 5.5e-93 | |
| TAIR|locus:2047550 | 344 | HHP3 "heptahelical protein 3" | 0.561 | 0.610 | 0.606 | 2.4e-91 | |
| TAIR|locus:2149319 | 332 | HHP1 "heptahelical transmembra | 0.639 | 0.719 | 0.421 | 3.7e-74 | |
| TAIR|locus:2120140 | 385 | HHP4 "heptahelical protein 4" | 0.566 | 0.550 | 0.404 | 8.8e-63 | |
| TAIR|locus:2121808 | 374 | HHP5 "heptahelical protein 5" | 0.550 | 0.550 | 0.406 | 2e-61 | |
| UNIPROTKB|F1NM81 | 375 | ADIPOR1 "Uncharacterized prote | 0.427 | 0.426 | 0.403 | 4.6e-42 | |
| UNIPROTKB|Q3T0U4 | 375 | ADIPOR1 "Adiponectin receptor | 0.427 | 0.426 | 0.403 | 4.6e-42 | |
| UNIPROTKB|E2RE84 | 375 | ADIPOR1 "Uncharacterized prote | 0.427 | 0.426 | 0.403 | 4.6e-42 | |
| UNIPROTKB|Q96A54 | 375 | ADIPOR1 "Adiponectin receptor | 0.427 | 0.426 | 0.403 | 4.6e-42 | |
| UNIPROTKB|F1S4N1 | 374 | ADIPOR1 "Uncharacterized prote | 0.427 | 0.427 | 0.403 | 4.6e-42 |
| TAIR|locus:2126709 HHP2 "heptahelical transmembrane protein2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 191/339 (56%), Positives = 216/339 (63%)
Query: 36 KKEKRLVKFQELPDYMKDNEYILDYYRCEWPLKDACLSVFSWHNETLNIWTHLVGFFIFA 95
+ EKRL+KF+ELP Y+KDNE+I ++YRCEW +K+ LS FSWHNETLNIWTHL GF IF
Sbjct: 26 RSEKRLMKFEELPRYLKDNEFIHNHYRCEWSIKETFLSAFSWHNETLNIWTHLCGFAIFT 85
Query: 96 -VLVVXXXXXXXXXXXXFIMKKFFSRPGEIFGPFVPMMMMKNDTMNVSDNHMMFPGSLMN 154
++VV F+ S I P+ P M M D SD + L
Sbjct: 86 WMMVVSSMETTELGLAGFV--SLLSG-ATIRWPW-PSMAMSKDVYFSSDQTLHH--DL-- 137
Query: 155 NITEP-SGFHIREQVTQEVIPKWPWFVFLFGAMGXXXXXXXXXXXXXXXRRFNIFFWRLD 213
N+T S + + V E IPKWPW VFL GAMG RRFN+FFWRLD
Sbjct: 138 NVTHTRSLLNSQGDVNYEAIPKWPWLVFLTGAMGCLICSSMSHLFACHSRRFNLFFWRLD 197
Query: 214 YAGISLMIVSSFFAPIYYTFYCHPQTRFLYXXXXXXXXXXXXXXXXXXXXSSPRFRSFRA 273
YAGISLMIV SFFAPIYY F CH R Y S+PRFRSFRA
Sbjct: 198 YAGISLMIVCSFFAPIYYAFSCHTYWRLFYLSSISILGLLAIFTLLSPSLSAPRFRSFRA 257
Query: 274 SLFLAMGFSGVIPATHALILHWGHPHVYISLGYELAMAVLYSVGAGFYVGRIPERWKPGA 333
+LFL MGFSGVIPATH L LH HP+V I+L YELAMAVLY+ GA FYV RIPERWKPGA
Sbjct: 258 ALFLTMGFSGVIPATHVLYLHKDHPNVLIALVYELAMAVLYATGAAFYVTRIPERWKPGA 317
Query: 334 FDIAGHSHQIFHVFVVLGALAHCAATLFIMDFRQGSPPC 372
FDIAGHSHQIFHVFVVLGALAH A+L IMDFR+ SP C
Sbjct: 318 FDIAGHSHQIFHVFVVLGALAHSVASLLIMDFRRASPSC 356
|
|
| TAIR|locus:2047550 HHP3 "heptahelical protein 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2149319 HHP1 "heptahelical transmembrane protein1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2120140 HHP4 "heptahelical protein 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2121808 HHP5 "heptahelical protein 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NM81 ADIPOR1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q3T0U4 ADIPOR1 "Adiponectin receptor 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2RE84 ADIPOR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q96A54 ADIPOR1 "Adiponectin receptor protein 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1S4N1 ADIPOR1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| gw1.XVIII.3100.1 | hypothetical protein (334 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 374 | |||
| pfam03006 | 207 | pfam03006, HlyIII, Haemolysin-III related | 2e-46 | |
| COG1272 | 226 | COG1272, COG1272, Predicted membrane protein, hemo | 6e-26 | |
| TIGR01065 | 204 | TIGR01065, hlyIII, channel protein, hemolysin III | 6e-10 | |
| pfam03006 | 207 | pfam03006, HlyIII, Haemolysin-III related | 6e-05 |
| >gnl|CDD|217315 pfam03006, HlyIII, Haemolysin-III related | Back alignment and domain information |
|---|
Score = 157 bits (399), Expect = 2e-46
Identities = 69/183 (37%), Positives = 92/183 (50%), Gaps = 18/183 (9%)
Query: 175 KWPWFVFLFGAMGCLICSSLSHLLACHSR-RFNIFFWRLDYAGISLMIVSSFFAPIYYTF 233
P+ ++ L+ S+L HL +CHS R +LD++GI L+I S+ + Y
Sbjct: 40 VVPFSIYGLSLFLLLLVSTLYHLFSCHSEGRAKYVLRKLDHSGIYLLIAGSYTPFLLYAL 99
Query: 234 YCHPQTRFLYLTSITTLGILAIITLLAPGLSSPRFRSFRASLFLAMGFSGVIPATH-ALI 292
++ L I L +L I+ L RFR R L+L MG+ G+IP H L
Sbjct: 100 --CGPLGWILLIFIWGLALLGILLKLFW---LKRFRWLRTVLYLLMGWLGIIPIKHLILA 154
Query: 293 LHWGHPHVYISLGYELAMAVLYSVGAGFYVGRIPERWKPGAFDIAGHSHQIFHVFVVLGA 352
L G L + VLY++GA FY R P G FDI GHSHQIFH+FVVLGA
Sbjct: 155 LGGGG------LVLLVLGGVLYTLGAIFYALRFP-----GPFDIWGHSHQIFHLFVVLGA 203
Query: 353 LAH 355
L H
Sbjct: 204 LCH 206
|
Members of this family are integral membrane proteins. This family includes a protein with hemolytic activity from Bacillus cereus. It has been proposed that YOL002c encodes a Saccharomyces cerevisiae protein that plays a key role in metabolic pathways that regulate lipid and phosphate metabolism. In eukaryotes, members are seven-transmembrane pass molecules found to encode functional receptors with a broad range of apparent ligand specificities, including progestin and adipoQ receptors, and hence have been named PAQR proteins. The mammalian members include progesterone binding proteins. Unlike the case with GPCR receptor proteins, the evolutionary ancestry of the members of this family can be traced back to the Archaea. Length = 207 |
| >gnl|CDD|224191 COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|233258 TIGR01065, hlyIII, channel protein, hemolysin III family | Back alignment and domain information |
|---|
| >gnl|CDD|217315 pfam03006, HlyIII, Haemolysin-III related | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 374 | |||
| KOG0748 | 286 | consensus Predicted membrane proteins, contain hem | 100.0 | |
| PF03006 | 222 | HlyIII: Haemolysin-III related; InterPro: IPR00425 | 100.0 | |
| COG1272 | 226 | Predicted membrane protein, hemolysin III homolog | 100.0 | |
| TIGR01065 | 204 | hlyIII channel protein, hemolysin III family. This | 100.0 | |
| PRK15087 | 219 | hemolysin; Provisional | 100.0 | |
| KOG4243 | 298 | consensus Macrophage maturation-associated protein | 99.69 | |
| PF05875 | 262 | Ceramidase: Ceramidase; InterPro: IPR008901 This e | 97.7 | |
| PF04080 | 267 | Per1: Per1-like ; InterPro: IPR007217 A member of | 94.9 | |
| KOG2970 | 319 | consensus Predicted membrane protein [Function unk | 93.72 | |
| PF13965 | 570 | SID-1_RNA_chan: dsRNA-gated channel SID-1 | 90.97 | |
| PF12036 | 186 | DUF3522: Protein of unknown function (DUF3522); In | 82.08 |
| >KOG0748 consensus Predicted membrane proteins, contain hemolysin III domain [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-69 Score=520.51 Aligned_cols=272 Identities=50% Similarity=0.900 Sum_probs=241.7
Q ss_pred hhhcccceeccCCCcccccCCcccCCccCCCCHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q 017277 35 MKKEKRLVKFQELPDYMKDNEYILDYYRCEWPLKDACLSVFSWHNETLNIWTHLVGFFIFAVLVVMSSMEKLELESSFIM 114 (374)
Q Consensus 35 ~~~~~~l~~~~elP~~~~dN~yI~~GYR~~~s~~~cl~SlF~~HNET~NIWTHlig~~~fl~l~~~~~~~~~~~~~~~~~ 114 (374)
..+.++++++||+|+|+||||||++|||+..|.++|++|+|++||||+||||||+|+++|+.+.+.....
T Consensus 5 ~~~~~~l~~~~~lP~~~~dn~yi~~gyR~~~s~~~c~~S~f~~hNEt~NiwTHLlg~i~f~~~~~~~~~~---------- 74 (286)
T KOG0748|consen 5 LLKRPRLLPWDELPEWLKDNEYILTGYRPGSSFRACFKSIFQWHNETLNIWTHLLGFILFLFLLILFMPR---------- 74 (286)
T ss_pred cccccccCChhhCCHHHhcCcceeCccCCCCCHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHccc----------
Confidence 3457789999999999999999999999779999999999999999999999999999999998765320
Q ss_pred hhhcCCCCCcCCCcccccccccccccccCCccccCCCccCCCCCCCCcccccccccccCCchhHHHHHHHHHHHHHHHHH
Q 017277 115 KKFFSRPGEIFGPFVPMMMMKNDTMNVSDNHMMFPGSLMNNITEPSGFHIREQVTQEVIPKWPWFVFLFGAMGCLICSSL 194 (374)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~~~~~~~~Stl 194 (374)
...+. +......+.+|.++ ++++|++
T Consensus 75 ----------~~~~~-----------------------------------------~~~~~~~~~lf~~~---~~~~S~~ 100 (286)
T KOG0748|consen 75 ----------VLLPV-----------------------------------------DSHLSEKIFLFFLG---CLLLSSL 100 (286)
T ss_pred ----------ccccc-----------------------------------------cccchHHHHHHHHH---HHHHHHH
Confidence 00000 00000114555555 4444999
Q ss_pred hhhcccccHhHHHHHHhhhhhhHHHHHhhhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHhhccCCCcccchhHH
Q 017277 195 SHLLACHSRRFNIFFWRLDYAGISLMIVSSFFAPIYYTFYCHPQTRFLYLTSITTLGILAIITLLAPGLSSPRFRSFRAS 274 (374)
Q Consensus 195 yH~f~~hS~~~~~~~~~lDy~GI~llI~Gs~~p~~yy~f~c~p~~~~~y~~~i~~l~~~~~~~~l~~~f~~~~~r~~R~~ 274 (374)
||+++|||++.++.|.++||+||+++|.||++|.+||+|+|++.++.+|+..+.++|++++++.+.++++++++|.+|+.
T Consensus 101 ~H~~~~~s~~~~~~~~~lDY~GIs~li~gS~~~~~yy~f~c~~~~~~iy~~~~~~lgi~~~~~~l~~~~~~~~~r~~R~~ 180 (286)
T KOG0748|consen 101 YHLFSCHSEKVSRFFLKLDYAGISLLIIGSFLPIIYYAFYCHPFFRLIYLPIILVLGLLAIFVSLSDKFRTPKRRPLRAG 180 (286)
T ss_pred HHHHhcccHHHHHHHHHccHHhhHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHheeechhhhCCccchhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHhcCC-chhhHHHHHHHHHHHHHHhhhhhccccCCCcCCCCccccCCchhhHHHHHHHHHHH
Q 017277 275 LFLAMGFSGVIPATHALILHWGH-PHVYISLGYELAMAVLYSVGAGFYVGRIPERWKPGAFDIAGHSHQIFHVFVVLGAL 353 (374)
Q Consensus 275 ~f~~~g~~~~~Pi~h~i~~~~~~-~~~~~~l~~~i~~~~~y~~G~~fYa~r~PEr~~PG~FD~~G~SHqifHifV~~g~~ 353 (374)
+|+.+|.++++|++|++...|+. +.....+.++++++++|++|++||++|+||||+|||||++||||||||++|++|++
T Consensus 181 ~f~~~~~~~i~P~~h~~~~~g~~~~~~~~~~~~~~~~~~~yi~ga~fY~~riPER~~PGkfD~~G~SHQifHv~vv~~a~ 260 (286)
T KOG0748|consen 181 VFLLLGLSGILPLLHRLILFGGRGPEVVIALGYVILMAVLYLLGALFYATRIPERWFPGKFDIWGHSHQIFHVLVVLAAL 260 (286)
T ss_pred HHHHHHHhhccHhhhheeeecCCccceehhhhHHHHHHHHHHHHHHHhhcCCCcccCCCccceeCChhHHHHHHHHHHHH
Confidence 99999999999999999887654 45677899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCC
Q 017277 354 AHCAATLFIMDFRQGSP 370 (374)
Q Consensus 354 ~h~~ai~~~~~~r~~~~ 370 (374)
+|+.+++.++++|++..
T Consensus 261 ~~~~a~~~~~~~~~~~~ 277 (286)
T KOG0748|consen 261 FHLEAVLLDYEWRHSHL 277 (286)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999999874
|
|
| >PF03006 HlyIII: Haemolysin-III related; InterPro: IPR004254 Members of this family are integral membrane proteins | Back alignment and domain information |
|---|
| >COG1272 Predicted membrane protein, hemolysin III homolog [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR01065 hlyIII channel protein, hemolysin III family | Back alignment and domain information |
|---|
| >PRK15087 hemolysin; Provisional | Back alignment and domain information |
|---|
| >KOG4243 consensus Macrophage maturation-associated protein [Defense mechanisms] | Back alignment and domain information |
|---|
| >PF05875 Ceramidase: Ceramidase; InterPro: IPR008901 This entry consists of several ceramidases | Back alignment and domain information |
|---|
| >PF04080 Per1: Per1-like ; InterPro: IPR007217 A member of this family has been implemented in protein processing in the endoplasmic reticulum [] | Back alignment and domain information |
|---|
| >KOG2970 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >PF13965 SID-1_RNA_chan: dsRNA-gated channel SID-1 | Back alignment and domain information |
|---|
| >PF12036 DUF3522: Protein of unknown function (DUF3522); InterPro: IPR021910 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 374 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.8 bits (97), Expect = 4e-04
Identities = 29/184 (15%), Positives = 59/184 (32%), Gaps = 43/184 (23%)
Query: 47 LPDYMKDNEYILDYYRCEWPLKDACLSVFSWHNETLNIWTHLVG--------FFIFAVL- 97
++ + D + D S+ S E ++ H++ +F L
Sbjct: 26 EDAFVDN----FDCKDVQ----DMPKSILS--KEEID---HIIMSKDAVSGTLRLFWTLL 72
Query: 98 -----VVMSSMEK-LELESSFIMKKFFSRPGEIFGPFVPMMMMKNDTMNVSDNHMMFPGS 151
+V +E+ L + F+M + + + ++ N DN +
Sbjct: 73 SKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN--DNQVFAKY- 129
Query: 152 LMNNITEPSGFHIREQVTQEVIPKWPWFVFLFGAMGC----LICSSL-SHLLACHSRRFN 206
N++ + Q E+ P V + G +G + S+ + C F
Sbjct: 130 ---NVSRLQPYLKLRQALLELRPA-KN-VLIDGVLGSGKTWVALDVCLSYKVQCK-MDFK 183
Query: 207 IFFW 210
I FW
Sbjct: 184 I-FW 186
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00