Citrus Sinensis ID: 017290
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 374 | 2.2.26 [Sep-21-2011] | |||||||
| A3C4S4 | 378 | GDP-mannose 3,5-epimerase | yes | no | 1.0 | 0.989 | 0.928 | 0.0 | |
| A2Z7B3 | 378 | GDP-mannose 3,5-epimerase | N/A | no | 1.0 | 0.989 | 0.925 | 0.0 | |
| Q2R1V8 | 371 | GDP-mannose 3,5-epimerase | no | no | 0.973 | 0.981 | 0.936 | 0.0 | |
| Q93VR3 | 377 | GDP-mannose 3,5-epimerase | yes | no | 1.0 | 0.992 | 0.904 | 0.0 | |
| Q6GMI9 | 418 | UDP-glucuronic acid decar | yes | no | 0.802 | 0.717 | 0.274 | 5e-25 | |
| Q5PQX0 | 420 | UDP-glucuronic acid decar | yes | no | 0.802 | 0.714 | 0.265 | 1e-23 | |
| Q91XL3 | 420 | UDP-glucuronic acid decar | yes | no | 0.802 | 0.714 | 0.265 | 1e-23 | |
| Q8NBZ7 | 420 | UDP-glucuronic acid decar | yes | no | 0.802 | 0.714 | 0.265 | 1e-23 | |
| Q5R885 | 420 | UDP-glucuronic acid decar | yes | no | 0.802 | 0.714 | 0.265 | 1e-23 | |
| Q6DF08 | 421 | UDP-glucuronic acid decar | yes | no | 0.807 | 0.717 | 0.260 | 8e-23 |
| >sp|A3C4S4|GME1_ORYSJ GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. japonica GN=GME-1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/378 (92%), Positives = 364/378 (96%), Gaps = 4/378 (1%)
Query: 1 MGSTE--GT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASD 57
MGS+E GT YG YTY ELERE YWPSEKLRIS+TGAGGFI SHIARRLKSEGHYIIASD
Sbjct: 1 MGSSEKNGTAYGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYIIASD 60
Query: 58 WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN 117
WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT GVDHVFNLAADMGGMGFIQSNHSVIMYN
Sbjct: 61 WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNGVDHVFNLAADMGGMGFIQSNHSVIMYN 120
Query: 118 NTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 177
NTMISFNMLEA+RI+GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL
Sbjct: 121 NTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 180
Query: 178 ASEELCKHYTKDFGIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDG 236
A+EELCKHYTKDFGIECRVGRFHNIYGPFGTWK G EKAPAAFCRKA TSTD+FEMWGDG
Sbjct: 181 ATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDG 240
Query: 237 LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG 296
LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEI+LSFED++LPIHHIPG
Sbjct: 241 LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPG 300
Query: 297 PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVV 356
PEGVRGRNSDNTLIKEKLGWAP+MKLKDGLR TYFWIKEQIEKEKTQG+D++ YGSSKVV
Sbjct: 301 PEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAGYGSSKVV 360
Query: 357 GTQAPVQLGSLRAADGKE 374
TQAPVQLGSLRAADGKE
Sbjct: 361 STQAPVQLGSLRAADGKE 378
|
Catalyzes a reversible epimerization of GDP-D-mannose that precedes the committed step in the biosynthesis of vitamin C (L-ascorbate), resulting in the hydrolysis of the highly energetic glycosyl-pyrophosphoryl linkage. Able to catalyze 2 distinct epimerization reactions and can release both GDP-L-galactose and GDP-L-gulose from GDP-mannose. Oryza sativa subsp. japonica (taxid: 39947) EC: 5EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 8 |
| >sp|A2Z7B3|GME1_ORYSI GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. indica GN=OsI_032456 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/378 (92%), Positives = 363/378 (96%), Gaps = 4/378 (1%)
Query: 1 MGSTE--GT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASD 57
MGS+E GT YG YTY ELERE YWPSEKLRIS+TGAGGFI SHIARRLKSEGHYIIASD
Sbjct: 1 MGSSEKNGTAYGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYIIASD 60
Query: 58 WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN 117
WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT VDHVFNLAADMGGMGFIQSNHSVIMYN
Sbjct: 61 WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNSVDHVFNLAADMGGMGFIQSNHSVIMYN 120
Query: 118 NTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 177
NTMISFNMLEA+RI+GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL
Sbjct: 121 NTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 180
Query: 178 ASEELCKHYTKDFGIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDG 236
A+EELCKHYTKDFGIECRVGRFHNIYGPFGTWK G EKAPAAFCRKA TSTD+FEMWGDG
Sbjct: 181 ATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDG 240
Query: 237 LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG 296
LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEI+LSFED++LPIHHIPG
Sbjct: 241 LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPG 300
Query: 297 PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVV 356
PEGVRGRNSDNTLIKEKLGWAP+MKLKDGLR TYFWIKEQIEKEKTQG+D++ YGSSKVV
Sbjct: 301 PEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAGYGSSKVV 360
Query: 357 GTQAPVQLGSLRAADGKE 374
TQAPVQLGSLRAADGKE
Sbjct: 361 STQAPVQLGSLRAADGKE 378
|
Catalyzes a reversible epimerization of GDP-D-mannose that precedes the committed step in the biosynthesis of vitamin C (L-ascorbate), resulting in the hydrolysis of the highly energetic glycosyl-pyrophosphoryl linkage. Able to catalyze 2 distinct epimerization reactions and can release both GDP-L-galactose and GDP-L-gulose from GDP-mannose. Oryza sativa subsp. indica (taxid: 39946) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 8 |
| >sp|Q2R1V8|GME2_ORYSJ GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp. japonica GN=GME-2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/365 (93%), Positives = 356/365 (97%), Gaps = 1/365 (0%)
Query: 11 YTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFC 70
YTY ELE+EPYWP EKLRIS+TGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFC
Sbjct: 7 YTYVELEKEPYWPFEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFC 66
Query: 71 HEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASR 130
HEFHLVDLRVMDNCLKVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEA+R
Sbjct: 67 HEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAAR 126
Query: 131 ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF 190
I+GVKRFFYASSACIYPEFKQL+T VSLKESDAWPAEPQDAYGLEKLA+EELCKHYTKDF
Sbjct: 127 INGVKRFFYASSACIYPEFKQLDTVVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF 186
Query: 191 GIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249
GIECRVGRFHNIYGPFGTWK G EKAPAAFCRKALTSTD+FEMWGDGLQTRSFTFIDECV
Sbjct: 187 GIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDRFEMWGDGLQTRSFTFIDECV 246
Query: 250 EGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTL 309
EGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFE+K+LPIHHIPGPEGVRGRNSDNTL
Sbjct: 247 EGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPGPEGVRGRNSDNTL 306
Query: 310 IKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGTQAPVQLGSLRA 369
IKEKLGWAP+M+LKDGLRITYFWIKEQ+EKEK +G+DLS YGSSKVV TQAPVQLGSLRA
Sbjct: 307 IKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKAEGVDLSAYGSSKVVQTQAPVQLGSLRA 366
Query: 370 ADGKE 374
ADGKE
Sbjct: 367 ADGKE 371
|
Catalyzes a reversible epimerization of GDP-D-mannose that precedes the committed step in the biosynthesis of vitamin C (L-ascorbate), resulting in the hydrolysis of the highly energetic glycosyl-pyrophosphoryl linkage. Able to catalyze 2 distinct epimerization reactions and can release both GDP-L-galactose and GDP-L-gulose from GDP-mannose. Oryza sativa subsp. japonica (taxid: 39947) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 8 |
| >sp|Q93VR3|GME_ARATH GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana GN=At5g28840 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/377 (90%), Positives = 363/377 (96%), Gaps = 3/377 (0%)
Query: 1 MGSTEGT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWK 59
MG+T GT YGAYTY+ELERE YWPSE L+IS+TGAGGFIASHIARRLK EGHY+IASDWK
Sbjct: 1 MGTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWK 60
Query: 60 KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 119
KNEHMTEDMFC EFHLVDLRVM+NCLKVT+GVDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61 KNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
Query: 120 MISFNMLEASRISGVKRFFYASSACIYPEFKQLET-NVSLKESDAWPAEPQDAYGLEKLA 178
MISFNM+EA+RI+G+KRFFYASSACIYPEFKQLET NVSLKESDAWPAEPQDAYGLEKLA
Sbjct: 121 MISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLA 180
Query: 179 SEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGL 237
+EELCKHY KDFGIECR+GRFHNIYGPFGTWKG EKAPAAFCRKA TSTD+FEMWGDGL
Sbjct: 181 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGL 240
Query: 238 QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP 297
QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAE+VLSFE+KKLPIHHIPGP
Sbjct: 241 QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGP 300
Query: 298 EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVG 357
EGVRGRNSDN LIKEKLGWAP+M+LK+GLRITYFWIKEQIEKEK +G D+S+YGSSKVVG
Sbjct: 301 EGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYGSSKVVG 360
Query: 358 TQAPVQLGSLRAADGKE 374
TQAPVQLGSLRAADGKE
Sbjct: 361 TQAPVQLGSLRAADGKE 377
|
Catalyzes a reversible epimerization of GDP-D-mannose that precedes the committed step in the biosynthesis of vitamin C (L-ascorbate), resulting in the hydrolysis of the highly energetic glycosyl-pyrophosphoryl linkage. Able to catalyze 2 distinct epimerization reactions and can release both GDP-L-galactose and GDP-L-gulose from GDP-mannose. Arabidopsis thaliana (taxid: 3702) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 8 |
| >sp|Q6GMI9|UXS1_DANRE UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 157/328 (47%), Gaps = 28/328 (8%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 85 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 144
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 145 E---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 199
Query: 142 SACIY--PEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
++ +Y PE V + D W P P+ Y K +E +C Y K G+E R
Sbjct: 200 TSEVYGDPE-------VHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 252
Query: 196 VGRFHNIYGPFGTWKGME--KAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVL 253
V R I+ FG+ M + + F +AL + ++G G QTR+F ++ + V G++
Sbjct: 253 VAR---IFNTFGSRMHMNDGRVVSNFILQALQG-EALTVYGSGSQTRAFQYVSDLVNGLV 308
Query: 254 RLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKE 312
L S+ PVN+G+ E ++ E A+++ S + I +P + + R D K
Sbjct: 309 SLMNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKL 368
Query: 313 KLGWAPSMKLKDGLRITYFWIKEQIEKE 340
LGW P + L++GL T + ++E +
Sbjct: 369 LLGWEPVVPLEEGLNKTIQYFSRELEHQ 396
|
Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis (By similarity). Essential during embryogenesis for craniofacial development. Danio rerio (taxid: 7955) EC: 4 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 5 |
| >sp|Q5PQX0|UXS1_RAT UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 153/324 (47%), Gaps = 24/324 (7%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 E---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIY--PEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
++ +Y PE V + D W P P+ Y K +E +C Y K G+E R
Sbjct: 202 TSEVYGDPE-------VHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 254
Query: 196 VGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255
V R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 255 VARIFNTFGPRMHMND-GRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVAL 312
Query: 256 TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKL 314
S+ PVN+G+ E ++ E A+++ + I + + + R D K L
Sbjct: 313 MNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLML 372
Query: 315 GWAPSMKLKDGLRITYFWIKEQIE 338
GW P + L++GL + ++++E
Sbjct: 373 GWEPVVPLEEGLNKAIHYFRKELE 396
|
Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis. Rattus norvegicus (taxid: 10116) EC: 4 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 5 |
| >sp|Q91XL3|UXS1_MOUSE UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 153/324 (47%), Gaps = 24/324 (7%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 E---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIY--PEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
++ +Y PE V + D W P P+ Y K +E +C Y K G+E R
Sbjct: 202 TSEVYGDPE-------VHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 254
Query: 196 VGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255
V R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 255 VARIFNTFGPRMHMND-GRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVAL 312
Query: 256 TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKL 314
S+ PVN+G+ E ++ E A+++ + I + + + R D K L
Sbjct: 313 MNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLML 372
Query: 315 GWAPSMKLKDGLRITYFWIKEQIE 338
GW P + L++GL + ++++E
Sbjct: 373 GWEPVVPLEEGLNKAIHYFRKELE 396
|
Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis. Mus musculus (taxid: 10090) EC: 4 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 5 |
| >sp|Q8NBZ7|UXS1_HUMAN UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 153/324 (47%), Gaps = 24/324 (7%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 E---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIY--PEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
++ +Y PE V + D W P P+ Y K +E +C Y K G+E R
Sbjct: 202 TSEVYGDPE-------VHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 254
Query: 196 VGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255
V R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 255 VARIFNTFGPRMHMND-GRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVAL 312
Query: 256 TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKL 314
S+ PVN+G+ E ++ E A+++ + I + + + R D K L
Sbjct: 313 MNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLML 372
Query: 315 GWAPSMKLKDGLRITYFWIKEQIE 338
GW P + L++GL + ++++E
Sbjct: 373 GWEPVVPLEEGLNKAIHYFRKELE 396
|
Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis. Homo sapiens (taxid: 9606) EC: 4 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 5 |
| >sp|Q5R885|UXS1_PONAB UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 153/324 (47%), Gaps = 24/324 (7%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 E---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIY--PEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
++ +Y PE V + D W P P+ Y K +E +C Y K G+E R
Sbjct: 202 TSEVYGDPE-------VHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 254
Query: 196 VGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255
V R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 255 VARIFNTFGPRMHMND-GRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVAL 312
Query: 256 TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKL 314
S+ PVN+G+ E ++ E A+++ + I + + + R D K L
Sbjct: 313 MNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLML 372
Query: 315 GWAPSMKLKDGLRITYFWIKEQIE 338
GW P + L++GL + ++++E
Sbjct: 373 GWEPVVPLEEGLNKAIHYFRKELE 396
|
Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis. Pongo abelii (taxid: 9601) EC: 4 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 5 |
| >sp|Q6DF08|UXS1_XENTR UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 154/326 (47%), Gaps = 24/326 (7%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 88 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 147
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 148 E---PLYIEVDQIYHLASPASPPNYM-YNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 202
Query: 142 SACIY--PEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
++ +Y PE V + + W P P+ Y K +E +C Y K G+E R
Sbjct: 203 TSEVYGDPE-------VHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 255
Query: 196 VGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255
V R N +GP + + F +AL ++ ++G G QTR+F ++ + V G++ L
Sbjct: 256 VARIFNTFGPRMHMND-GRVVSNFILQALQG-EQLTVYGSGEQTRAFQYVSDLVNGLVAL 313
Query: 256 TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKL 314
S+ PVN+G+ + S+ + A ++ I + + + R D K L
Sbjct: 314 MNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSEAQDDPQRRKPDIRKAKLLL 373
Query: 315 GWAPSMKLKDGLRITYFWIKEQIEKE 340
GW P + L++GL T + ++++E +
Sbjct: 374 GWEPVVPLEEGLNKTIHYFRKELEHQ 399
|
Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis. Xenopus tropicalis (taxid: 8364) EC: 4 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 374 | ||||||
| 319739579 | 375 | putative GDP-mannose-3,5-epimerase [Citr | 1.0 | 0.997 | 0.986 | 0.0 | |
| 255580957 | 376 | dtdp-glucose 4-6-dehydratase, putative [ | 1.0 | 0.994 | 0.954 | 0.0 | |
| 80973462 | 376 | GDP-D-mannose-3',5'-epimerase [Malpighia | 1.0 | 0.994 | 0.954 | 0.0 | |
| 225451338 | 376 | PREDICTED: GDP-mannose 3,5-epimerase 1 [ | 1.0 | 0.994 | 0.952 | 0.0 | |
| 146432257 | 376 | GDP-mannose-3',5'-epimerase [Vitis vinif | 1.0 | 0.994 | 0.949 | 0.0 | |
| 224125640 | 375 | predicted protein [Populus trichocarpa] | 1.0 | 0.997 | 0.938 | 0.0 | |
| 147794688 | 376 | hypothetical protein VITISV_003948 [Viti | 1.0 | 0.994 | 0.946 | 0.0 | |
| 224130650 | 375 | predicted protein [Populus trichocarpa] | 1.0 | 0.997 | 0.936 | 0.0 | |
| 225432858 | 376 | PREDICTED: GDP-mannose 3,5-epimerase 1 i | 1.0 | 0.994 | 0.944 | 0.0 | |
| 449442927 | 376 | PREDICTED: GDP-mannose 3,5-epimerase 1-l | 1.0 | 0.994 | 0.938 | 0.0 |
| >gi|319739579|gb|ADV59924.1| putative GDP-mannose-3,5-epimerase [Citrus unshiu] | Back alignment and taxonomy information |
|---|
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/375 (98%), Positives = 372/375 (99%), Gaps = 1/375 (0%)
Query: 1 MGSTEGTYGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK 60
MGS+EGTYGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK
Sbjct: 1 MGSSEGTYGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK 60
Query: 61 NEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTM 120
NEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTM
Sbjct: 61 NEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTM 120
Query: 121 ISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASE 180
ISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASE
Sbjct: 121 ISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASE 180
Query: 181 ELCKHYTKDFGIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDGLQT 239
ELCKHYTKDFGIECRVGRFHNIYGPFGTWK G EKAPAAFCRKALTSTDKFEMWGDGLQT
Sbjct: 181 ELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQT 240
Query: 240 RSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG 299
RSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG
Sbjct: 241 RSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG 300
Query: 300 VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGTQ 359
VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKT GIDLSVYGSSKVVGTQ
Sbjct: 301 VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTPGIDLSVYGSSKVVGTQ 360
Query: 360 APVQLGSLRAADGKE 374
APVQLGSLRAADG+E
Sbjct: 361 APVQLGSLRAADGQE 375
|
Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255580957|ref|XP_002531297.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis] gi|223529130|gb|EEF31110.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/376 (95%), Positives = 371/376 (98%), Gaps = 2/376 (0%)
Query: 1 MGSTEGT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWK 59
MGS+EGT YGAYTYE LEREPYWPSEKLRIS+TGAGGFIASHIARRLKSEGHYIIASDWK
Sbjct: 1 MGSSEGTNYGAYTYENLEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWK 60
Query: 60 KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 119
KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61 KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
Query: 120 MISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAS 179
MISFNMLEASRI+GVKR FYASSACIYPEFKQL+TNVSLKESDAWPAEPQDAYGLEKLA+
Sbjct: 121 MISFNMLEASRINGVKRLFYASSACIYPEFKQLDTNVSLKESDAWPAEPQDAYGLEKLAT 180
Query: 180 EELCKHYTKDFGIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDGLQ 238
EELCKHYTKDFGIECR+GRFHNIYGPFGTWK G EKAPAAFCRKALTSTDKFEMWGDGLQ
Sbjct: 181 EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQ 240
Query: 239 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE 298
TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFED+KLPIHHIPGPE
Sbjct: 241 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDRKLPIHHIPGPE 300
Query: 299 GVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGT 358
GVRGRNSDNTLIKEKLGWAP+M+LKDGLRITYFWIKEQIEKEK+QG+DLS+YGSSKVVGT
Sbjct: 301 GVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQIEKEKSQGVDLSIYGSSKVVGT 360
Query: 359 QAPVQLGSLRAADGKE 374
QAPVQLGSLRAADGKE
Sbjct: 361 QAPVQLGSLRAADGKE 376
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|80973462|gb|ABB53472.1| GDP-D-mannose-3',5'-epimerase [Malpighia glabra] | Back alignment and taxonomy information |
|---|
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/376 (95%), Positives = 368/376 (97%), Gaps = 2/376 (0%)
Query: 1 MGSTEGT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWK 59
M S++GT YGAYTY+ELEREPYWPSEKLRIS+TGAGGFIASHIARRLKSEGHYIIASDWK
Sbjct: 1 MESSDGTDYGAYTYKELEREPYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWK 60
Query: 60 KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 119
KNEHMTEDMFCHEFHLVDLRVMDNCLKVTK DHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61 KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKDADHVFNLAADMGGMGFIQSNHSVIMYNNT 120
Query: 120 MISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAS 179
MISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA+
Sbjct: 121 MISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 180
Query: 180 EELCKHYTKDFGIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDGLQ 238
EELCKHYTKDFGIECRVGRFHNIYGPFGTWK G EKAPAAFCRKA+TS DKFEMWGDGLQ
Sbjct: 181 EELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAITSVDKFEMWGDGLQ 240
Query: 239 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE 298
TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE
Sbjct: 241 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE 300
Query: 299 GVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGT 358
GVRGRNSDNTLIKEKLGWAP+M+LKDGLRITYFWIKEQIEKEK QGIDL+VYGSSKVVGT
Sbjct: 301 GVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQIEKEKAQGIDLAVYGSSKVVGT 360
Query: 359 QAPVQLGSLRAADGKE 374
QAPVQLGSLRAADGKE
Sbjct: 361 QAPVQLGSLRAADGKE 376
|
Source: Malpighia glabra Species: Malpighia glabra Genus: Malpighia Family: Malpighiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451338|ref|XP_002279377.1| PREDICTED: GDP-mannose 3,5-epimerase 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/376 (95%), Positives = 368/376 (97%), Gaps = 2/376 (0%)
Query: 1 MGSTEGT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWK 59
MGS +GT YGAYTYEELEREPYW SEKLRIS+TGAGGFIASHIARRLK+EGHYIIASDWK
Sbjct: 1 MGSNDGTTYGAYTYEELEREPYWQSEKLRISITGAGGFIASHIARRLKTEGHYIIASDWK 60
Query: 60 KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 119
KNEHMTEDMFCHEFHLVDLRVMDNCLKVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61 KNEHMTEDMFCHEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
Query: 120 MISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAS 179
MISFNMLEASRI+GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA+
Sbjct: 121 MISFNMLEASRINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 180
Query: 180 EELCKHYTKDFGIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDGLQ 238
EELCKHYTKDFGIECR+GRFHNIYGPFGTWK G EKAPAAFCRKALTSTDKFEMWGDGLQ
Sbjct: 181 EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQ 240
Query: 239 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE 298
TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFE+K LPIHHIPGPE
Sbjct: 241 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIHHIPGPE 300
Query: 299 GVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGT 358
GVRGRNSDNTLIKEKLGWAP+MKLKDGLRITYFWIKEQIEKEK +GIDLS+YGSSKVVGT
Sbjct: 301 GVRGRNSDNTLIKEKLGWAPTMKLKDGLRITYFWIKEQIEKEKVKGIDLSIYGSSKVVGT 360
Query: 359 QAPVQLGSLRAADGKE 374
QAPVQLGSLRAADGKE
Sbjct: 361 QAPVQLGSLRAADGKE 376
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|146432257|gb|ABQ41112.1| GDP-mannose-3',5'-epimerase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/376 (94%), Positives = 367/376 (97%), Gaps = 2/376 (0%)
Query: 1 MGSTEGT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWK 59
MGS +GT YGAYTYEELEREPYW SEKLRIS+TGAGGFIASHIARRLK+EGHYIIASDWK
Sbjct: 1 MGSNDGTTYGAYTYEELEREPYWQSEKLRISITGAGGFIASHIARRLKTEGHYIIASDWK 60
Query: 60 KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 119
KNEHMTEDMFCHEF LVDLRVMDNCLKVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61 KNEHMTEDMFCHEFRLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
Query: 120 MISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAS 179
MISFNMLEASRI+GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA+
Sbjct: 121 MISFNMLEASRINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 180
Query: 180 EELCKHYTKDFGIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDGLQ 238
EELCKHYTKDFGIECR+GRFHNIYGPFGTWK G EKAPAAFCRKALTSTDKFEMWGDGLQ
Sbjct: 181 EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQ 240
Query: 239 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE 298
TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFE+K LPIHHIPGPE
Sbjct: 241 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIHHIPGPE 300
Query: 299 GVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGT 358
GVRGRNSDNTLIKEKLGWAP+MKLKDGLRITYFWIKEQIEKEK +GIDLS+YGSSKVVGT
Sbjct: 301 GVRGRNSDNTLIKEKLGWAPTMKLKDGLRITYFWIKEQIEKEKVKGIDLSIYGSSKVVGT 360
Query: 359 QAPVQLGSLRAADGKE 374
QAPVQLGSLRAADGKE
Sbjct: 361 QAPVQLGSLRAADGKE 376
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224125640|ref|XP_002319639.1| predicted protein [Populus trichocarpa] gi|222858015|gb|EEE95562.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/375 (93%), Positives = 365/375 (97%), Gaps = 1/375 (0%)
Query: 1 MGSTEGTYGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK 60
MGS +G+YGAYTYE LEREPYWPSE L+IS+TGAGGFIASHIARRLKSEGHYIIASDWKK
Sbjct: 1 MGSADGSYGAYTYEALEREPYWPSENLKISITGAGGFIASHIARRLKSEGHYIIASDWKK 60
Query: 61 NEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTM 120
NEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTM
Sbjct: 61 NEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTM 120
Query: 121 ISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASE 180
ISFNMLEASRI+GVKR FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA+E
Sbjct: 121 ISFNMLEASRINGVKRLFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATE 180
Query: 181 ELCKHYTKDFGIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDGLQT 239
ELCKHYTKDFGIECR+GRFHNIYGPFGTWK G EKAPAAFCRK +TS DKFEMWGDGLQT
Sbjct: 181 ELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKTMTSIDKFEMWGDGLQT 240
Query: 240 RSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG 299
RSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFE+K LPIHHIPGPEG
Sbjct: 241 RSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIHHIPGPEG 300
Query: 300 VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGTQ 359
VRGRNSDNTLIKEKLGWAP+MKLKDGLR TYFWIKEQIEKEK+QG+DLS+YGSSKVVGTQ
Sbjct: 301 VRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKSQGMDLSIYGSSKVVGTQ 360
Query: 360 APVQLGSLRAADGKE 374
APVQLGSLRAADGKE
Sbjct: 361 APVQLGSLRAADGKE 375
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147794688|emb|CAN69149.1| hypothetical protein VITISV_003948 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/376 (94%), Positives = 365/376 (97%), Gaps = 2/376 (0%)
Query: 1 MGSTEGT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWK 59
MGSTEGT YG YTYE L REPYWPSEKLRIS+TGAGGFIASHIARRLK+EGHYIIASDWK
Sbjct: 1 MGSTEGTTYGEYTYENLXREPYWPSEKLRISITGAGGFIASHIARRLKTEGHYIIASDWK 60
Query: 60 KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 119
KNEHM EDMFCHEFHLVDLRVMDNCLKVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61 KNEHMPEDMFCHEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
Query: 120 MISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAS 179
MISFNMLEASRI+GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA+
Sbjct: 121 MISFNMLEASRINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 180
Query: 180 EELCKHYTKDFGIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDGLQ 238
EELCKHYTKDFGIECR+GRFHNIYGPFGTWK G EKAPAAFCRKA+TSTDKFEMWGDGLQ
Sbjct: 181 EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEMWGDGLQ 240
Query: 239 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE 298
TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFE+K LPIHHIPGPE
Sbjct: 241 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIHHIPGPE 300
Query: 299 GVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGT 358
GVRGRNSDN LIKEKLGWAP+M+LKDGLRITYFWIKEQIEKEK QGIDLSVYGSSKVVGT
Sbjct: 301 GVRGRNSDNNLIKEKLGWAPTMRLKDGLRITYFWIKEQIEKEKVQGIDLSVYGSSKVVGT 360
Query: 359 QAPVQLGSLRAADGKE 374
QAPVQLGSLRAADGKE
Sbjct: 361 QAPVQLGSLRAADGKE 376
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224130650|ref|XP_002328342.1| predicted protein [Populus trichocarpa] gi|222838057|gb|EEE76422.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/375 (93%), Positives = 367/375 (97%), Gaps = 1/375 (0%)
Query: 1 MGSTEGTYGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK 60
MG+ +G+YG+YTYE LEREPYWPSEKLRIS+TGAGGFIASHIARRLK+EGHYIIASDWKK
Sbjct: 1 MGTADGSYGSYTYEALEREPYWPSEKLRISITGAGGFIASHIARRLKAEGHYIIASDWKK 60
Query: 61 NEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTM 120
NEHMTEDMFCHEFHLVDLRVMDNCLKVTK VDHVFNLAADMGGMGFIQSNHSVIMYNNTM
Sbjct: 61 NEHMTEDMFCHEFHLVDLRVMDNCLKVTKDVDHVFNLAADMGGMGFIQSNHSVIMYNNTM 120
Query: 121 ISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASE 180
ISFNMLEASRI+GVKR FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA+E
Sbjct: 121 ISFNMLEASRINGVKRLFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATE 180
Query: 181 ELCKHYTKDFGIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDGLQT 239
ELCKHYTKDFGIECR+GRFHNIYGPFGTWK G EKAPAAFCRKA+TS DKFEMWGDGLQT
Sbjct: 181 ELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSIDKFEMWGDGLQT 240
Query: 240 RSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG 299
RSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFE+K LPIHHIPGPEG
Sbjct: 241 RSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIHHIPGPEG 300
Query: 300 VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGTQ 359
VRGRNSDNTLIKEKLGWAP+M+LKDGLRITYFWIKEQIEKEK++GIDLS+YGSSKVVGTQ
Sbjct: 301 VRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQIEKEKSKGIDLSIYGSSKVVGTQ 360
Query: 360 APVQLGSLRAADGKE 374
APVQLGSLRAADGKE
Sbjct: 361 APVQLGSLRAADGKE 375
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432858|ref|XP_002283898.1| PREDICTED: GDP-mannose 3,5-epimerase 1 isoform 1 [Vitis vinifera] gi|359477586|ref|XP_003631999.1| PREDICTED: GDP-mannose 3,5-epimerase 1 isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/376 (94%), Positives = 364/376 (96%), Gaps = 2/376 (0%)
Query: 1 MGSTEGT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWK 59
MGST GT YG YTYE LEREPYWPSEKLRIS+TGAGGFIASHIARRLK+EGHYIIASDWK
Sbjct: 1 MGSTGGTTYGEYTYENLEREPYWPSEKLRISITGAGGFIASHIARRLKTEGHYIIASDWK 60
Query: 60 KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 119
KNEHM EDMFCHEFHLVDLRVMDNCLKVT GV HVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61 KNEHMPEDMFCHEFHLVDLRVMDNCLKVTTGVGHVFNLAADMGGMGFIQSNHSVIMYNNT 120
Query: 120 MISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAS 179
MISFNMLEASRI+GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA+
Sbjct: 121 MISFNMLEASRINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 180
Query: 180 EELCKHYTKDFGIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDGLQ 238
EELCKHYTKDFGIECR+GRFHNIYGPFGTWK G EKAPAAFCRKA+TSTDKFEMWGDGLQ
Sbjct: 181 EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEMWGDGLQ 240
Query: 239 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE 298
TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFE+K LPIHHIPGPE
Sbjct: 241 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIHHIPGPE 300
Query: 299 GVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGT 358
GVRGRNSDN LIKEKLGWAP+M+LKDGLRITYFWIKEQIEKEK QGIDLSVYGSSKVVGT
Sbjct: 301 GVRGRNSDNNLIKEKLGWAPTMRLKDGLRITYFWIKEQIEKEKVQGIDLSVYGSSKVVGT 360
Query: 359 QAPVQLGSLRAADGKE 374
QAPVQLGSLRAADGKE
Sbjct: 361 QAPVQLGSLRAADGKE 376
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449442927|ref|XP_004139232.1| PREDICTED: GDP-mannose 3,5-epimerase 1-like [Cucumis sativus] gi|449482982|ref|XP_004156461.1| PREDICTED: GDP-mannose 3,5-epimerase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/376 (93%), Positives = 367/376 (97%), Gaps = 2/376 (0%)
Query: 1 MGST-EGTYGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWK 59
MGS E TYG+YTY+ELERE YWPSEKLRIS+TGAGGFIASHIARRLKSEGHYIIASDWK
Sbjct: 1 MGSAGETTYGSYTYQELEREAYWPSEKLRISITGAGGFIASHIARRLKSEGHYIIASDWK 60
Query: 60 KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 119
KNEHMTEDMFCHEFHLVDLRVMDNC+KVT+ VDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61 KNEHMTEDMFCHEFHLVDLRVMDNCMKVTENVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
Query: 120 MISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAS 179
MISFNMLEA+RI+GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA+
Sbjct: 121 MISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 180
Query: 180 EELCKHYTKDFGIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDGLQ 238
EELCKHYTKDFGIECR+GRFHNIYGPFGTWK G EKAPAAFCRKALTS DKFEMWGDGLQ
Sbjct: 181 EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSVDKFEMWGDGLQ 240
Query: 239 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE 298
TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSF+DKKLPIHHIPGPE
Sbjct: 241 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFDDKKLPIHHIPGPE 300
Query: 299 GVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGT 358
GVRGRNSDNTLIKEKLGWAP+MKLKDGLRITY WIKEQIEKEK++GIDL+VYGSSKVVGT
Sbjct: 301 GVRGRNSDNTLIKEKLGWAPTMKLKDGLRITYMWIKEQIEKEKSKGIDLTVYGSSKVVGT 360
Query: 359 QAPVQLGSLRAADGKE 374
QAPVQLGSLRAADGKE
Sbjct: 361 QAPVQLGSLRAADGKE 376
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 374 | ||||||
| TAIR|locus:2150441 | 377 | GME ""GDP-D-mannose 3',5'-epim | 1.0 | 0.992 | 0.904 | 3.3e-189 | |
| TIGR_CMR|GSU_1815 | 311 | GSU_1815 "NAD-dependent epimer | 0.794 | 0.954 | 0.294 | 1.2e-26 | |
| ZFIN|ZDB-GENE-020419-37 | 418 | uxs1 "UDP-glucuronic acid deca | 0.807 | 0.722 | 0.273 | 1.2e-26 | |
| UNIPROTKB|E1BMI4 | 420 | UXS1 "Uncharacterized protein" | 0.807 | 0.719 | 0.267 | 8.4e-26 | |
| UNIPROTKB|B3KV61 | 363 | UXS1 "UDP-glucuronate decarbox | 0.807 | 0.831 | 0.263 | 8.4e-26 | |
| UNIPROTKB|Q8NBZ7 | 420 | UXS1 "UDP-glucuronic acid deca | 0.807 | 0.719 | 0.263 | 8.4e-26 | |
| UNIPROTKB|F1SU22 | 397 | UXS1 "Uncharacterized protein" | 0.807 | 0.760 | 0.263 | 8.4e-26 | |
| MGI|MGI:1915133 | 420 | Uxs1 "UDP-glucuronate decarbox | 0.807 | 0.719 | 0.263 | 8.4e-26 | |
| RGD|628680 | 420 | Uxs1 "UDP-glucuronate decarbox | 0.807 | 0.719 | 0.263 | 8.4e-26 | |
| UNIPROTKB|Q5PQX0 | 420 | Uxs1 "UDP-glucuronic acid deca | 0.807 | 0.719 | 0.263 | 8.4e-26 |
| TAIR|locus:2150441 GME ""GDP-D-mannose 3',5'-epimerase"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1834 (650.7 bits), Expect = 3.3e-189, P = 3.3e-189
Identities = 341/377 (90%), Positives = 363/377 (96%)
Query: 1 MGSTEGT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWK 59
MG+T GT YGAYTY+ELERE YWPSE L+IS+TGAGGFIASHIARRLK EGHY+IASDWK
Sbjct: 1 MGTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWK 60
Query: 60 KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 119
KNEHMTEDMFC EFHLVDLRVM+NCLKVT+GVDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61 KNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
Query: 120 MISFNMLEASRISGVKRFFYASSACIYPEFKQLET-NVSLKESDAWPAEPQDAYGLEKLA 178
MISFNM+EA+RI+G+KRFFYASSACIYPEFKQLET NVSLKESDAWPAEPQDAYGLEKLA
Sbjct: 121 MISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLA 180
Query: 179 SEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGL 237
+EELCKHY KDFGIECR+GRFHNIYGPFGTWKG EKAPAAFCRKA TSTD+FEMWGDGL
Sbjct: 181 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGL 240
Query: 238 QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP 297
QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAE+VLSFE+KKLPIHHIPGP
Sbjct: 241 QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGP 300
Query: 298 EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVG 357
EGVRGRNSDN LIKEKLGWAP+M+LK+GLRITYFWIKEQIEKEK +G D+S+YGSSKVVG
Sbjct: 301 EGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYGSSKVVG 360
Query: 358 TQAPVQLGSLRAADGKE 374
TQAPVQLGSLRAADGKE
Sbjct: 361 TQAPVQLGSLRAADGKE 377
|
|
| TIGR_CMR|GSU_1815 GSU_1815 "NAD-dependent epimerase/dehydratase family protein" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 92/312 (29%), Positives = 146/312 (46%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASD-WKKNEHMTEDMFCHEFHLVDLRVMDNCL 85
+RI VTG GFI SH+ RL +GH ++ D + D +FH ++ D
Sbjct: 1 MRILVTGGAGFIGSHLCERLLEQGHDVLCLDNFFTGSKRNIDRLM-DFHRFEVIRHDIIE 59
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLE-ASRISGVKRFFYASSAC 144
+ VD ++NLA + + Q N + + M + NML A R+ R AS++
Sbjct: 60 PILLEVDRIYNLACPASPVHY-QYNPVKTIKTSVMGTINMLGLAKRVRA--RILQASTSE 116
Query: 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
+Y + + + P + Y K +E L Y + G++ R+ R N YG
Sbjct: 117 VYGD-PTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYG 175
Query: 205 P-FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-FRE 262
P G + + F +AL D ++GDG QTRSF ++D+ ++G++ L + D F
Sbjct: 176 PRMAEHDG--RVVSNFVVQALRGED-LTVYGDGSQTRSFCYVDDLLDGLVTLMEHDQFCG 232
Query: 263 PVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP-EGVRGRNSDNTLIKEKLGWAPSMK 321
PVN+G+ E + E A +++ I + P P + R R D TL + LGW P +
Sbjct: 233 PVNLGNPEETPIIEFARRIIAMTGSSSQIIYRPLPSDDPRQRQPDITLARTILGWEPRVS 292
Query: 322 LKDGLR--ITYF 331
L +GL I YF
Sbjct: 293 LDEGLAKTIEYF 304
|
|
| ZFIN|ZDB-GENE-020419-37 uxs1 "UDP-glucuronic acid decarboxylase 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 89/326 (27%), Positives = 157/326 (48%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 85 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 144
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 145 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 199
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 200 TSEVYGD-----PEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 254
Query: 198 RFHNIYGPFGTWKGME--KAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255
R I+ FG+ M + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 255 R---IFNTFGSRMHMNDGRVVSNFILQALQG-EALTVYGSGSQTRAFQYVSDLVNGLVSL 310
Query: 256 TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKL 314
S+ PVN+G+ E ++ E A+++ S + I +P + + R D K L
Sbjct: 311 MNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLL 370
Query: 315 GWAPSMKLKDGLRITYFWIKEQIEKE 340
GW P + L++GL T + ++E +
Sbjct: 371 GWEPVVPLEEGLNKTIQYFSRELEHQ 396
|
|
| UNIPROTKB|E1BMI4 UXS1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 86/322 (26%), Positives = 153/322 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI VTG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILVTGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 202 TSEVYGD-----PEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 257 RIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMN 314
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGW 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LGW
Sbjct: 315 SNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 374
Query: 317 APSMKLKDGLRITYFWIKEQIE 338
P + L++GL + ++++E
Sbjct: 375 EPVVPLEEGLNKAIHYFRKELE 396
|
|
| UNIPROTKB|B3KV61 UXS1 "UDP-glucuronate decarboxylase 1, isoform CRA_a" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 85/322 (26%), Positives = 153/322 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 30 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 89
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 90 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 144
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 145 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 199
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 200 RIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMN 257
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGW 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LGW
Sbjct: 258 SNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 317
Query: 317 APSMKLKDGLRITYFWIKEQIE 338
P + L++GL + ++++E
Sbjct: 318 EPVVPLEEGLNKAIHYFRKELE 339
|
|
| UNIPROTKB|Q8NBZ7 UXS1 "UDP-glucuronic acid decarboxylase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 85/322 (26%), Positives = 153/322 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 202 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 257 RIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMN 314
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGW 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LGW
Sbjct: 315 SNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 374
Query: 317 APSMKLKDGLRITYFWIKEQIE 338
P + L++GL + ++++E
Sbjct: 375 EPVVPLEEGLNKAIHYFRKELE 396
|
|
| UNIPROTKB|F1SU22 UXS1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 85/322 (26%), Positives = 153/322 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 64 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 123
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 124 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 178
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 179 TSEVYGD-----PEVHPQTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 233
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 234 RIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMN 291
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGW 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LGW
Sbjct: 292 SNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 351
Query: 317 APSMKLKDGLRITYFWIKEQIE 338
P + L++GL + ++++E
Sbjct: 352 EPVVPLEEGLNKAIHYFRKELE 373
|
|
| MGI|MGI:1915133 Uxs1 "UDP-glucuronate decarboxylase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 85/322 (26%), Positives = 153/322 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 202 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 257 RIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMN 314
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGW 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LGW
Sbjct: 315 SNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 374
Query: 317 APSMKLKDGLRITYFWIKEQIE 338
P + L++GL + ++++E
Sbjct: 375 EPVVPLEEGLNKAIHYFRKELE 396
|
|
| RGD|628680 Uxs1 "UDP-glucuronate decarboxylase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 85/322 (26%), Positives = 153/322 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 202 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 257 RIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMN 314
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGW 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LGW
Sbjct: 315 SNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 374
Query: 317 APSMKLKDGLRITYFWIKEQIE 338
P + L++GL + ++++E
Sbjct: 375 EPVVPLEEGLNKAIHYFRKELE 396
|
|
| UNIPROTKB|Q5PQX0 Uxs1 "UDP-glucuronic acid decarboxylase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 85/322 (26%), Positives = 153/322 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 202 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 257 RIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMN 314
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGW 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LGW
Sbjct: 315 SNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 374
Query: 317 APSMKLKDGLRITYFWIKEQIE 338
P + L++GL + ++++E
Sbjct: 375 EPVVPLEEGLNKAIHYFRKELE 396
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q2R1V8 | GME2_ORYSJ | 5, ., 1, ., 3, ., 1, 8 | 0.9369 | 0.9732 | 0.9811 | no | no |
| Q93VR3 | GME_ARATH | 5, ., 1, ., 3, ., 1, 8 | 0.9045 | 1.0 | 0.9920 | yes | no |
| A2Z7B3 | GME1_ORYSI | 5, ., 1, ., 3, ., 1, 8 | 0.9259 | 1.0 | 0.9894 | N/A | no |
| A3C4S4 | GME1_ORYSJ | 5, ., 1, ., 3, ., 1, 8 | 0.9285 | 1.0 | 0.9894 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00031181001 | SubName- Full=Chromosome chr14 scaffold_54, whole genome shotgun sequence; (376 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| GSVIVG00036807001 | SubName- Full=Chromosome chr4 scaffold_83, whole genome shotgun sequence; (373 aa) | • | • | • | 0.927 | ||||||
| GSVIVG00027274001 | SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (452 aa) | • | • | 0.909 | |||||||
| GSVIVG00018410001 | SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (361 aa) | • | • | 0.905 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 374 | |||
| PLN02695 | 370 | PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | 0.0 | |
| cd05273 | 328 | cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP- | 0.0 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 2e-59 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 5e-58 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 5e-53 | |
| cd05230 | 305 | cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase | 6e-50 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 1e-48 | |
| cd05234 | 305 | cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, | 2e-39 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 1e-37 | |
| cd05253 | 332 | cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera | 3e-35 | |
| cd05239 | 300 | cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte | 2e-34 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 1e-29 | |
| PLN02206 | 442 | PLN02206, PLN02206, UDP-glucuronate decarboxylase | 2e-25 | |
| PLN02166 | 436 | PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase | 2e-24 | |
| PLN02725 | 306 | PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5- | 2e-23 | |
| TIGR04180 | 297 | TIGR04180, EDH_00030, NAD dependent epimerase/dehy | 5e-22 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 1e-21 | |
| cd05260 | 316 | cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase | 5e-19 | |
| TIGR01181 | 317 | TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd | 2e-18 | |
| cd05258 | 337 | cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e | 3e-18 | |
| cd05248 | 317 | cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto | 6e-18 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 2e-17 | |
| COG1088 | 340 | COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel | 4e-17 | |
| TIGR02197 | 314 | TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep | 7e-17 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 9e-17 | |
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 9e-15 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 2e-14 | |
| PRK15181 | 348 | PRK15181, PRK15181, Vi polysaccharide biosynthesis | 2e-12 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 4e-12 | |
| TIGR01179 | 328 | TIGR01179, galE, UDP-glucose-4-epimerase GalE | 4e-12 | |
| COG1089 | 345 | COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve | 3e-11 | |
| cd05240 | 306 | cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase | 3e-11 | |
| PLN02260 | 668 | PLN02260, PLN02260, probable rhamnose biosynthetic | 9e-11 | |
| cd08957 | 307 | cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic | 1e-10 | |
| cd09813 | 335 | cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD | 2e-09 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 3e-09 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 6e-09 | |
| cd05238 | 305 | cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n | 1e-07 | |
| PLN02427 | 386 | PLN02427, PLN02427, UDP-apiose/xylose synthase | 1e-07 | |
| cd05245 | 293 | cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | 2e-07 | |
| cd05193 | 295 | cd05193, AR_like_SDR_e, aldehyde reductase, flavon | 6e-07 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 6e-07 | |
| cd05237 | 287 | cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l | 9e-07 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 1e-06 | |
| cd08958 | 293 | cd08958, FR_SDR_e, flavonoid reductase (FR), exten | 2e-06 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 2e-06 | |
| cd05227 | 301 | cd05227, AR_SDR_e, aldehyde reductase, extended (e | 3e-06 | |
| cd05261 | 248 | cd05261, CAPF_like_SDR_e, capsular polysaccharide | 1e-05 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 3e-05 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 6e-05 | |
| PRK10217 | 355 | PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; | 6e-05 | |
| PRK10675 | 338 | PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro | 1e-04 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 1e-04 | |
| PLN02240 | 352 | PLN02240, PLN02240, UDP-glucose 4-epimerase | 3e-04 | |
| PRK11908 | 347 | PRK11908, PRK11908, NAD-dependent epimerase/dehydr | 5e-04 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 8e-04 | |
| cd05252 | 336 | cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata | 8e-04 | |
| PRK11150 | 308 | PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epi | 0.001 | |
| cd05272 | 308 | cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext | 0.002 | |
| cd05259 | 282 | cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe | 0.002 | |
| COG1086 | 588 | COG1086, COG1086, Predicted nucleoside-diphosphate | 0.002 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 0.004 |
| >gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Score = 802 bits (2073), Expect = 0.0
Identities = 341/369 (92%), Positives = 356/369 (96%), Gaps = 1/369 (0%)
Query: 7 TYGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE 66
+YGAYT ELEREPYWPSEKLRI +TGAGGFIASHIARRLK+EGHYIIASDWKKNEHM+E
Sbjct: 2 SYGAYTLAELEREPYWPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE 61
Query: 67 DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNML 126
DMFCHEFHLVDLRVM+NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNML
Sbjct: 62 DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNML 121
Query: 127 EASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHY 186
EA+RI+GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA+EELCKHY
Sbjct: 122 EAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHY 181
Query: 187 TKDFGIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245
TKDFGIECR+GRFHNIYGPFGTWK G EKAPAAFCRKALTSTD+FEMWGDG QTRSFTFI
Sbjct: 182 TKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFI 241
Query: 246 DECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNS 305
DECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEI LSFE+KKLPI HIPGPEGVRGRNS
Sbjct: 242 DECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGPEGVRGRNS 301
Query: 306 DNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGTQAPVQLG 365
DNTLIKEKLGWAP+M+LKDGLRITYFWIKEQIEKEK +G D + Y SSKVVGTQAPVQLG
Sbjct: 302 DNTLIKEKLGWAPTMRLKDGLRITYFWIKEQIEKEKAEGSDAAAYSSSKVVGTQAPVQLG 361
Query: 366 SLRAADGKE 374
SLRAADGKE
Sbjct: 362 SLRAADGKE 370
|
Length = 370 |
| >gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 530 bits (1367), Expect = 0.0
Identities = 234/327 (71%), Positives = 275/327 (84%), Gaps = 5/327 (1%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
R VTGAGGFI SH+A RLK+EGHY+ +DWK EHMT+ EFHLVDLR M+NCLK
Sbjct: 1 QRALVTGAGGFIGSHLAERLKAEGHYVRGADWKSPEHMTQPTDDDEFHLVDLREMENCLK 60
Query: 87 VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146
T+GVDHVF+LAADMGGMG+IQSNH+VIMYNNT+I+FNMLEA+RI+GV+RF +ASSAC+Y
Sbjct: 61 ATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVERFLFASSACVY 120
Query: 147 PEFKQLET-NVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
PEFKQLET V L+E DAWPAEPQDAYG EKLA+E LC+HY +D+GIE R+ RFHNIYGP
Sbjct: 121 PEFKQLETTVVRLREEDAWPAEPQDAYGWEKLATERLCQHYNEDYGIETRIVRFHNIYGP 180
Query: 206 FGTWKG-MEKAPAAFCRKALTS--TDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFRE 262
GTW G EKAPAA CRK T+ D+FE+WGDGLQTRSFT+ID+CVEG+ RL +SDF E
Sbjct: 181 RGTWDGGREKAPAAMCRKVATAKDGDRFEIWGDGLQTRSFTYIDDCVEGLRRLMESDFGE 240
Query: 263 PVNIGSDEMVSMNEMAEIVLSFEDKKLPI-HHIPGPEGVRGRNSDNTLIKEKLGWAPSMK 321
PVN+GSDEMVSMNE+AE+VLSF K L I HH PGP+GVRGRNSDNTL+KE+LGW P+
Sbjct: 241 PVNLGSDEMVSMNELAEMVLSFSGKPLEIIHHTPGPQGVRGRNSDNTLLKEELGWEPNTP 300
Query: 322 LKDGLRITYFWIKEQIEKEKTQGIDLS 348
L++GLRITYFWIKEQIE EK + D+S
Sbjct: 301 LEEGLRITYFWIKEQIEAEKAKTSDVS 327
|
This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 194 bits (495), Expect = 2e-59
Identities = 102/318 (32%), Positives = 155/318 (48%), Gaps = 26/318 (8%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD---WKKNEHMTEDMFCHEFHLVDLRVMDNC 84
R+ VTG GFI SH+ RL GH +I D K E++ E +F D+R +
Sbjct: 1 RVLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENLPEVKPNVKFIEGDIRDDELV 60
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQ-SNHSVIMYN--NTMISFNMLEASRISGVKRFFYAS 141
+GVD+VF+ AA + S I + N + + N+LEA+R +GVKRF YAS
Sbjct: 61 EFAFEGVDYVFHQAA----QASVPRSIEDPIKDHEVNVLGTLNLLEAARKAGVKRFVYAS 116
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
S+ +Y + L E P P Y + K A E C+ + + +G+ R+ N
Sbjct: 117 SSSVYGDPPYLPK----DED--HPPNPLSPYAVSKYAGELYCQVFARLYGLPTVSLRYFN 170
Query: 202 IYGP----FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
+YGP G + F +AL ++GDG QTR FT++++ VE L
Sbjct: 171 VYGPRQDPNGGYAA---VIPIFIERALKGEP-PTIYGDGEQTRDFTYVEDVVEANLLAAT 226
Query: 258 SDFREPV-NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-VRGRNSDNTLIKEKLG 315
+ V NIG+ + S+NE+AE++ K+L + P G VR +D + K+ LG
Sbjct: 227 AGAGGEVYNIGTGKRTSVNELAELIREILGKELEPVYAPPRPGDVRHSLADISKAKKLLG 286
Query: 316 WAPSMKLKDGLRITYFWI 333
W P + ++GLR+T W
Sbjct: 287 WEPKVSFEEGLRLTVEWF 304
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 190 bits (485), Expect = 5e-58
Identities = 95/320 (29%), Positives = 151/320 (47%), Gaps = 15/320 (4%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWK--KNEHMTEDMFCHEFHLVDLRVMDNCL 85
RI VTG GFI SH+ RL + GH + D + + + L D ++D
Sbjct: 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVD--E 59
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS-AC 144
D V +LAA S+ + + N + N+LEA+R +GVKRF +ASS +
Sbjct: 60 LAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSV 119
Query: 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
+Y + L + E P P + YG+ KLA+E+L + Y + +G+ + R N+YG
Sbjct: 120 VYGDPPPLP----IDEDLG-PPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYG 174
Query: 205 PFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPV 264
P +AF R+ L + GDG QTR F ++D+ + +L ++
Sbjct: 175 PGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGGVF 234
Query: 265 NIGSDEM-VSMNEMAEIVLSFEDKKLP-IHHIPGPEG---VRGRNSDNTLIKEKLGWAPS 319
NIGS +++ E+AE V K P I +IP G+ D + + LGW P
Sbjct: 235 NIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAALGWEPK 294
Query: 320 MKLKDGLRITYFWIKEQIEK 339
+ L++GL T W+ +++E
Sbjct: 295 VSLEEGLADTLEWLLKKLEL 314
|
Length = 314 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 174 bits (442), Expect = 5e-53
Identities = 74/241 (30%), Positives = 106/241 (43%), Gaps = 43/241 (17%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT 88
I VTG GFI SH+ RRL GH ++ D
Sbjct: 1 ILVTGGAGFIGSHLVRRLLERGHEVVVIDR------------------------------ 30
Query: 89 KGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPE 148
+D V +LAA +G N N + + N+LEA+R +GVKRF YASSA +Y
Sbjct: 31 --LDVVVHLAALVGVPASWD-NPDEDFETNVVGTLNLLEAARKAGVKRFVYASSASVYGS 87
Query: 149 FKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGT 208
+ L E + P P YG+ KLA+E L + Y + +G+ + R N+YGP G
Sbjct: 88 PEGLP------EEEETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGP-GQ 140
Query: 209 WKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FREPVNI 266
++ F R+AL ++G G QTR F +D+ V +L ++ NI
Sbjct: 141 RPRLDGVVNDFIRRALE-GKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGGGVYNI 199
Query: 267 G 267
G
Sbjct: 200 G 200
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 169 bits (431), Expect = 6e-50
Identities = 103/325 (31%), Positives = 156/325 (48%), Gaps = 39/325 (12%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD-----WKKN-EHMTEDMFCHEFHLVDLRVM 81
RI +TG GF+ SH+ RL +GH +I D K+N EH+ F + V
Sbjct: 2 RILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGRKRNIEHLIGH---PNFEFIRHDVT 58
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ + VD +++LA Q N + N + + NML ++ G R AS
Sbjct: 59 E---PLYLEVDQIYHLAC-PASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVGA-RVLLAS 113
Query: 142 SACIY--PEF-KQLET---NVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
++ +Y PE Q E+ NV+ P P+ Y K +E LC Y + G++ R
Sbjct: 114 TSEVYGDPEVHPQPESYWGNVN-------PIGPRSCYDEGKRVAETLCMAYHRQHGVDVR 166
Query: 196 VGRFHNIYGPFGTWKGME----KAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG 251
+ R N YGP M + + F +AL ++GDG QTRSF ++ + VEG
Sbjct: 167 IARIFNTYGP-----RMHPNDGRVVSNFIVQALRGEP-ITVYGDGTQTRSFQYVSDLVEG 220
Query: 252 VLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE-GVRGRNSDNTL 309
++RL SD F PVN+G+ E ++ E+AE+V K I +P PE + R D +
Sbjct: 221 LIRLMNSDYFGGPVNLGNPEEFTILELAELVKKLTGSKSEIVFLPLPEDDPKRRRPDISK 280
Query: 310 IKEKLGWAPSMKLKDGLRITYFWIK 334
KE LGW P + L++GLR T + +
Sbjct: 281 AKELLGWEPKVPLEEGLRRTIEYFR 305
|
UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 163 bits (416), Expect = 1e-48
Identities = 72/244 (29%), Positives = 106/244 (43%), Gaps = 20/244 (8%)
Query: 31 VTGAGGFIASHIARRLKSEGH----YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
VTG GFI SH+ RRL EG+ + FH DL D +
Sbjct: 3 VTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIR-----FHEGDLTDPDALER 57
Query: 87 VTKGV--DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144
+ V D V +LAA G + + + N + + +LEA+R +GVKRF +ASS+
Sbjct: 58 LLAEVQPDAVIHLAAQSGVGASFEDP-ADFIRANVLGTLRLLEAARRAGVKRFVFASSSE 116
Query: 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
+Y + + + E P P Y KLA+E L + Y + +G+ + R N+YG
Sbjct: 117 VYGDV----ADPPITEDT--PLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYG 170
Query: 205 PFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR-LTKSDFREP 263
P + A R+ L + GDG Q R F ++D+ +L L D E
Sbjct: 171 PGNPDPFVTHVIPALIRRILEG-KPILLLGDGTQRRDFLYVDDVARAILLALEHPDGGEI 229
Query: 264 VNIG 267
NIG
Sbjct: 230 YNIG 233
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 141 bits (358), Expect = 2e-39
Identities = 96/317 (30%), Positives = 149/317 (47%), Gaps = 32/317 (10%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLR--VMDNCL 85
RI VTG GFI SH+ RL EG+ ++ D + + EF R D
Sbjct: 1 RILVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSS--GRRENIEPEFENKAFRFVKRDLLD 58
Query: 86 K----VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
K D VF+LAA+ + ++ + + N + ++N+LEA R +GVKR +AS
Sbjct: 59 TADKVAKKDGDTVFHLAAN-PDVRLGATDPDIDLEENVLATYNVLEAMRANGVKRIVFAS 117
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
S+ +Y E K + T + +P P YG KLA+E L Y FG + + RF N
Sbjct: 118 SSTVYGEAKVIPT------PEDYPPLPISVYGASKLAAEALISAYAHLFGFQAWIFRFAN 171
Query: 202 IYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR 261
I GP T F K + ++ E+ GDG Q +S+ ++ +CV+ +L +
Sbjct: 172 IVGPRST----HGVIYDFINKLKRNPNELEVLGDGRQRKSYLYVSDCVDAMLLAWEK-ST 226
Query: 262 EPV---NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIK------E 312
E V N+G+D+ +S+NE+AEIV+ K + G RG D ++ +
Sbjct: 227 EGVNIFNLGNDDTISVNEIAEIVIEELGLKPRFKYSG---GDRGWKGDVPYMRLDIEKLK 283
Query: 313 KLGWAPSMKLKDGLRIT 329
LGW P ++ +R T
Sbjct: 284 ALGWKPRYNSEEAVRKT 300
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 1e-37
Identities = 92/327 (28%), Positives = 136/327 (41%), Gaps = 29/327 (8%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWK--KNEHMTEDMFCHE-FHLV--DLRVMD 82
+ VTGA GFI SH+ RL EGH + A D N D H+ FH + D+R
Sbjct: 1 NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHFISGDVRDAS 60
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
+ K D VF+LAA + + S + N + N+LEA+ + KR + S+
Sbjct: 61 EVEYLVKKCDVVFHLAALIAIPYSYTAPLSYV-ETNVFGTLNVLEAACVLYRKRVVHTST 119
Query: 143 ACIYPEFKQLETNVSLKESDAWPAE--PQDAYGLEKLASEELCKHYTKDFGIECRVGRFH 200
+ +Y +V + E P+ Y K ++ L Y + FG+ + R
Sbjct: 120 SEVY----GTAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRPF 175
Query: 201 NIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF----------IDECVE 250
N YGP + +A + GDG TR F F I + +E
Sbjct: 176 NTYGP----RQSARAVIPTIISQRAIGQRLINLGDGSPTRDFNFVKDTARGFIDILDAIE 231
Query: 251 GVLRLTKSDFREPVNIGS-DEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTL 309
V + + E ++IG+ + + E+ E+VL D + PG V R D
Sbjct: 232 AVGEIINNGSGEEISIGNPAVELIVEELGEMVLIVYDDH--REYRPGYSEVERRIPDIRK 289
Query: 310 IKEKLGWAPSMKLKDGLRITYFWIKEQ 336
K LGW P L+DGLR T W K+Q
Sbjct: 290 AKRLLGWEPKYSLRDGLRETIEWFKDQ 316
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 3e-35
Identities = 91/342 (26%), Positives = 148/342 (43%), Gaps = 46/342 (13%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD-----------WKKNEHMTEDMFCHEFHLV 76
+I VTGA GFI H+A+RL G ++ D + E + + F
Sbjct: 2 KILVTGAAGFIGFHVAKRLLERGDEVVGIDNLNDYYDVRLKEARLELLGKSGGFK-FVKG 60
Query: 77 DLR---VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG 133
DL + K + D V +LAA G +++ H+ + +N + N+LE R G
Sbjct: 61 DLEDREALRRLFKDHE-FDAVIHLAAQAGVRYSLENPHAY-VDSNIVGFLNLLELCRHFG 118
Query: 134 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
VK YASS+ +Y L T + E D P Y K A+E + Y+ +GI
Sbjct: 119 VKHLVYASSSSVY----GLNTKMPFSEDDR-VDHPISLYAATKKANELMAHTYSHLYGIP 173
Query: 194 CRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVL 253
RF +YGP+G + A F + L +++ DG +R FT+ID+ VEGV+
Sbjct: 174 TTGLRFFTVYGPWGR---PDMALFLFTKAILEGK-PIDVFNDGNMSRDFTYIDDIVEGVV 229
Query: 254 RLTKSDFREP-------------------VNIGSDEMVSMNEMAEIVLSFEDKKLPIHHI 294
R + + NIG++ V + + E + KK +++
Sbjct: 230 RALDTPAKPNPNWDAEAPDPSTSSAPYRVYNIGNNSPVKLMDFIEALEKALGKKAKKNYL 289
Query: 295 PGPEG-VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKE 335
P +G V +D + ++ LG+ P L++G++ W KE
Sbjct: 290 PMQKGDVPETYADISKLQRLLGYKPKTSLEEGVKRFVEWYKE 331
|
This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332 |
| >gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 2e-34
Identities = 81/317 (25%), Positives = 138/317 (43%), Gaps = 31/317 (9%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
+I VTG G + S I R L G+ + +++ DL +
Sbjct: 1 KILVTGHRGLVGSAIVRVLARRGY----ENVVFRTS--KEL--------DLTDQEAVRAF 46
Query: 88 TKGV--DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
+ D+V +LAA +GG+ + + + +N +I+ N++ A+ GVK+ + S+CI
Sbjct: 47 FEKEKPDYVIHLAAKVGGIVANMTYPADFLRDNLLINDNVIHAAHRFGVKKLVFLGSSCI 106
Query: 146 YPEFKQLETNVSLKESDAW---PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNI 202
YP+ + ESD P + Y + K A +LC+ Y K +G + N+
Sbjct: 107 YPDL----APQPIDESDLLTGPPEPTNEGYAIAKRAGLKLCEAYRKQYGCDYISVMPTNL 162
Query: 203 YGPFGTW--KGMEKAPA---AFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
YGP + + PA F L + +WG G R F + D+ ++ L +
Sbjct: 163 YGPHDNFDPENSHVIPALIRKFHEAKLRGGKEVTVWGSGTPRREFLYSDDLARAIVFLLE 222
Query: 258 S-DFREPVNIGSDEMVSMNEMAEIVLS-FEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLG 315
+ D VN+GS +S+ E+AE + K + P+G + D + ++ LG
Sbjct: 223 NYDEPIIVNVGSGVEISIRELAEAIAEVVGFKGEIVFDTSKPDGQPRKLLDVSKLR-ALG 281
Query: 316 WAPSMKLKDGLRITYFW 332
W P L+ G+R TY W
Sbjct: 282 WFPFTPLEQGIRETYEW 298
|
GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 1e-29
Identities = 85/312 (27%), Positives = 139/312 (44%), Gaps = 18/312 (5%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
R+ + G GFI SH+ L EG + D + + ++ D +
Sbjct: 1 RVLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPPYEL-PLGGVDYIKGDYENRADLESA 59
Query: 88 TKGVDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEASRISGVKRFFYASSA- 143
G+D V +LA+ + N + + N + +LEA +G+ + +ASS
Sbjct: 60 LVGIDTVIHLASTT----NPATSNKNPILDIQTNVAPTVQLLEACAAAGIGKIIFASSGG 115
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIY 203
+Y +QL + ESD P P +YG+ KLA E+ + Y +G++ V R N Y
Sbjct: 116 TVYGVPEQLP----ISESD--PTLPISSYGISKLAIEKYLRLYQYLYGLDYTVLRISNPY 169
Query: 204 GPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREP 263
GP G + K L + E+WGDG R + +ID+ VE ++ L +S E
Sbjct: 170 GPGQRPDGKQGVIPIALNKIL-RGEPIEIWGDGESIRDYIYIDDLVEALMALLRSKGLEE 228
Query: 264 V-NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP-EGVRGRNSDNTLIKEKLGWAPSMK 321
V NIGS S+ E+ + + + + + P V D + + +LGW+P +
Sbjct: 229 VFNIGSGIGYSLAELIAEIEKVTGRSVQVIYTPARTTDVPKIVLDISRARAELGWSPKIS 288
Query: 322 LKDGLRITYFWI 333
L+DGL T+ WI
Sbjct: 289 LEDGLEKTWQWI 300
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|177856 PLN02206, PLN02206, UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Score = 106 bits (265), Expect = 2e-25
Identities = 91/313 (29%), Positives = 145/313 (46%), Gaps = 24/313 (7%)
Query: 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASD---WKKNEHMTEDMFCHEFHLVDLRV 80
+ LR+ VTG GF+ SH+ RL + G +I D + E++ F L+ V
Sbjct: 117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDV 176
Query: 81 MDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYA 140
++ L VD +++LA + + + N + N + + NML ++ G RF
Sbjct: 177 VEPILL---EVDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLT 231
Query: 141 SSACIYP---EFKQLET---NVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
S++ +Y + Q+ET NV+ P + Y K +E L Y + +E
Sbjct: 232 STSEVYGDPLQHPQVETYWGNVN-------PIGVRSCYDEGKRTAETLTMDYHRGANVEV 284
Query: 195 RVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 254
R+ R N YGP + + F +AL + ++GDG QTRSF F+ + VEG++R
Sbjct: 285 RIARIFNTYGPRMCIDD-GRVVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEGLMR 342
Query: 255 LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE-GVRGRNSDNTLIKEK 313
L + + P N+G+ +M E+A++V D I P E R D T KE
Sbjct: 343 LMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTEDDPHKRKPDITKAKEL 402
Query: 314 LGWAPSMKLKDGL 326
LGW P + L+ GL
Sbjct: 403 LGWEPKVSLRQGL 415
|
Length = 442 |
| >gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 103 bits (257), Expect = 2e-24
Identities = 89/315 (28%), Positives = 142/315 (45%), Gaps = 30/315 (9%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD---WKKNEHMTEDMFCHEFHLVDLRVM 81
++LRI VTG GF+ SH+ +L G +I D + E++ F L+ V+
Sbjct: 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVV 178
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L VD +++LA + + + N + N M + NML ++ G RF S
Sbjct: 179 EPILL---EVDQIYHLACPASPVHY-KYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTS 233
Query: 142 SACIYP---EFKQLET---NVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
++ +Y E Q ET NV+ P + Y K +E L Y + G+E R
Sbjct: 234 TSEVYGDPLEHPQKETYWGNVN-------PIGERSCYDEGKRTAETLAMDYHRGAGVEVR 286
Query: 196 VGRFHNIYGP---FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV 252
+ R N YGP + + A RK ++GDG QTRSF ++ + V+G+
Sbjct: 287 IARIFNTYGPRMCLDDGRVVSNFVAQTIRK-----QPMTVYGDGKQTRSFQYVSDLVDGL 341
Query: 253 LRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PEGVRGRNSDNTLIK 311
+ L + + P N+G+ +M E+AE+V D I P + R D + K
Sbjct: 342 VALMEGEHVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNTADDPHKRKPDISKAK 401
Query: 312 EKLGWAPSMKLKDGL 326
E L W P + L++GL
Sbjct: 402 ELLNWEPKISLREGL 416
|
Length = 436 |
| >gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Score = 98.6 bits (246), Expect = 2e-23
Identities = 85/331 (25%), Positives = 142/331 (42%), Gaps = 47/331 (14%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKG 90
V G G + S I R+L++ G ++ H D+ D+ K T
Sbjct: 2 VAGHRGLVGSAIVRKLEALGF----TNLVLRTHKELDLTRQA----DVEAFFAKEKPT-- 51
Query: 91 VDHVFNLAADMGGMGFIQSNHSV-IMYNNTMISFNMLEASRISGVKRFFYASSACIYPEF 149
+V AA +GG+ + + N I N+++A+ GVK+ + S+CIYP+F
Sbjct: 52 --YVILAAAKVGGI-HANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKF 108
Query: 150 KQLETNVSLKES---DAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPF 206
+ E+ P + Y + K+A ++C+ Y +G + G N+YGP
Sbjct: 109 ----APQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPH 164
Query: 207 GTWKGMEKA---PAAF--CRKALTSTDKFEM-WGDGLQTRSFTFIDECVEGVLRLTKS-D 259
+ E + PA +A + + WG G R F +D+ + V+ L +
Sbjct: 165 DNFH-PENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYS 223
Query: 260 FREPVNIGSDEMVSMNEMAEIV---------LSFEDKKLPIHHIPGPEGVRGRNSDNTLI 310
E VN+GS + V++ E+AE+V L ++ K P+G + D++ +
Sbjct: 224 GAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDTSK--------PDGTPRKLMDSSKL 275
Query: 311 KEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 341
+ LGW P LKDGL+ TY W E E
Sbjct: 276 R-SLGWDPKFSLKDGLQETYKWYLENYETGG 305
|
Length = 306 |
| >gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family | Back alignment and domain information |
|---|
Score = 94.7 bits (236), Expect = 5e-22
Identities = 79/312 (25%), Positives = 138/312 (44%), Gaps = 42/312 (13%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIA-------SDWKKNEHMTEDMFCH-EFHLVDLRVMD 82
VTGA GFI SH+ L +G+ + A + W + ++ E D+R D
Sbjct: 3 VTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGWLDTSPPEVKDKIEVVTGDIRDPD 62
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQ-SNHSVIMYNNTMI--SFNMLEASRISGVKRFFY 139
+ K KG D VF+LAA + I S + Y +T + + N+L+A+R GV++ +
Sbjct: 63 SVRKAMKGCDVVFHLAALIA----IPYSYIAPDSYVDTNVTGTLNVLQAARDLGVEKVVH 118
Query: 140 ASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRF 199
S++ +Y + V + E P + Q Y K+ +++L + + F + R
Sbjct: 119 TSTSEVYGTAQY----VPIDE--KHPLQGQSPYSASKIGADQLALSFYRSFNTPVTIIRP 172
Query: 200 HNIYGPFGTWKGMEKAPA---AFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 256
N YGP + A A + + + ++ G TR F ++ + V G + +
Sbjct: 173 FNTYGP------RQSARAVIPTIITQIASGKRRIKL-GSLSPTRDFNYVTDTVRGFIAIA 225
Query: 257 KSD--FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNS-------DN 307
+SD E +NIGS+ +S+ + +++ ++ I E +R S DN
Sbjct: 226 ESDKTVGEVINIGSNFEISIGDTVKLIAEIMGSEVEIET--DEERLRPEKSEVERLWCDN 283
Query: 308 TLIKEKLGWAPS 319
+ IKE GW P
Sbjct: 284 SKIKELTGWQPK 295
|
This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 93.8 bits (234), Expect = 1e-21
Identities = 84/331 (25%), Positives = 144/331 (43%), Gaps = 43/331 (12%)
Query: 28 RISVTGAGGFIASHIARRL-KSEGHYII--------ASDWKKNEHMTEDMFCHEFHLVDL 78
+I VTG GFI S+ R L Y I A + +N + F D+
Sbjct: 2 KILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGN-LENLEDVSSSPRYRFVKGDI 60
Query: 79 RVMDNCLKV--TKGVDHVFNLAADMGGMGFIQSNH--------SVIMYNNTMISFNMLEA 128
+ ++ + +D V + AA +S H + N + ++ +LEA
Sbjct: 61 CDAELVDRLFEEEKIDAVIHFAA--------ES-HVDRSISDPEPFIRTNVLGTYTLLEA 111
Query: 129 SRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTK 188
+R GVKRF + S+ +Y + L + E+ P P Y K A++ L + Y +
Sbjct: 112 ARKYGVKRFVHISTDEVYGD---LLDDGEFTETS--PLAPTSPYSASKAAADLLVRAYHR 166
Query: 189 DFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 248
+G+ + R N YGP+ + EK F AL ++GDGL R + ++++
Sbjct: 167 TYGLPVVITRCSNNYGPY---QFPEKLIPLFILNALDG-KPLPIYGDGLNVRDWLYVEDH 222
Query: 249 VEGVLR-LTKSDFREPVNIGSDEMVSMNEMAEIVLSF--EDKKLPIHHIPGPEGVRGRNS 305
+ L K E NIG ++ E+ +++L +D+ L I ++ G R +
Sbjct: 223 ARAIELVLEKGRVGEIYNIGGGNELTNLELVKLILELLGKDESL-ITYVKDRPGHDRRYA 281
Query: 306 -DNTLIKEKLGWAPSMKLKDGLRITYFWIKE 335
D++ I+ +LGW P + ++GLR T W E
Sbjct: 282 IDSSKIRRELGWRPKVSFEEGLRKTVRWYLE 312
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
| >gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 86.5 bits (215), Expect = 5e-19
Identities = 74/328 (22%), Positives = 128/328 (39%), Gaps = 46/328 (14%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYII-----ASDW--KKNEHMTEDMFCHEFHLVDLRV 80
R +TG G S++A L +G+ + +S + + +H+ + H DL
Sbjct: 1 RALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDRIDHLYINKDRITLHYGDLTD 60
Query: 81 MDNCLKVTKGV--DHVFNLAA-DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-R 136
+ + + V D +++LAA + F ++ N + + N+LEA RI G+ R
Sbjct: 61 SSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPEYT--AEVNAVGTLNLLEAIRILGLDAR 118
Query: 137 FFYASSACIY---PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
F+ ASS+ Y E Q ET P P+ Y + KL ++ + ++Y + +G+
Sbjct: 119 FYQASSSEEYGKVQELPQSETT---------PFRPRSPYAVSKLYADWITRNYREAYGLF 169
Query: 194 CRVGRFHNIYGP-----FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 248
GR N GP F T K R ++ G+ R + +
Sbjct: 170 AVNGRLFNHEGPRRGETFVT----RKITRQVARIKAGLQPVLKL-GNLDAKRDWGDARDY 224
Query: 249 VEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVR------- 301
VE L + + I + E S+ E E+ I P R
Sbjct: 225 VEAYWLLLQQGEPDDYVIATGETHSVREFVELAFEESGLTGDIEVEIDPRYFRPTEVDLL 284
Query: 302 -GRNSDNTLIKEKLGWAPSMKLKDGLRI 328
G D + +E+LGW P + ++ +R
Sbjct: 285 LG---DPSKAREELGWKPEVSFEELVRE 309
|
GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 84.7 bits (210), Expect = 2e-18
Identities = 90/334 (26%), Positives = 140/334 (41%), Gaps = 54/334 (16%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIA--SDWK-------------KNEHMTEDMFCHE 72
RI VTG GFI S+ R YI+ D + +N ED +
Sbjct: 1 RILVTGGAGFIGSNFVR-------YILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYR 53
Query: 73 FHLVDLRVMD--NCLKVTKGVDHVFNLAAD-------MGGMGFIQSNHSVIMYNNTMISF 123
F D+ + + L D V + AA+ G FI++N + ++
Sbjct: 54 FVKGDIGDRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETN--------VVGTY 105
Query: 124 NMLEASRISGVK-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL 182
+LEA R + RF + S+ +Y + LE + E+ P P Y K AS+ L
Sbjct: 106 TLLEAVRKYWHEFRFHHISTDEVYGD---LEKGDAFTETT--PLAPSSPYSASKAASDHL 160
Query: 183 CKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242
+ Y + +G+ + R N YGP+ + EK AL ++GDG Q R +
Sbjct: 161 VRAYHRTYGLPALITRCSNNYGPY---QFPEKLIPLMITNALAG-KPLPVYGDGQQVRDW 216
Query: 243 TFIDECVEGV-LRLTKSDFREPVNIGSDEMVSMNEMAEIVLSF--EDKKLPIHHIPGPEG 299
++++ + L L K E NIG + E+ E +L +D+ L I H+ G
Sbjct: 217 LYVEDHCRAIYLVLEKGRVGETYNIGGGNERTNLEVVETILELLGKDEDL-ITHVEDRPG 275
Query: 300 VRGRNS-DNTLIKEKLGWAPSMKLKDGLRITYFW 332
R + D + IK +LGWAP ++GLR T W
Sbjct: 276 HDRRYAIDASKIKRELGWAPKYTFEEGLRKTVQW 309
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317 |
| >gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 84.3 bits (209), Expect = 3e-18
Identities = 86/344 (25%), Positives = 135/344 (39%), Gaps = 46/344 (13%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD------WKKNEHMTEDMFCHE-FHLV--DL 78
R+ +TG GFI S++AR +G +I D N + V D+
Sbjct: 2 RVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGDI 61
Query: 79 RVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RF 137
R ++ + + +D + + AA S N + + N+LEA+R F
Sbjct: 62 RNRNDLEDLFEDIDLIIHTAAQPSVTTSASSPRLDF-ETNALGTLNVLEAARQHAPNAPF 120
Query: 138 FYASSACIYP------EFKQLETNVSLKESDAWPA-----EPQDA----YGLEKLASEEL 182
+ S+ +Y ++LET L PA P D YG K A+++
Sbjct: 121 IFTSTNKVYGDLPNYLPLEELETRYELAPEGWSPAGISESFPLDFSHSLYGASKGAADQY 180
Query: 183 CKHYTKDFGIECRVGRFHNIYGP--FGT----WKGMEKAPAAFCRKALTSTDKFEMWG-D 235
+ Y + FG++ V R + GP FGT W A F + A+T ++G
Sbjct: 181 VQEYGRIFGLKTVVFRCGCLTGPRQFGTEDQGWV------AYFLKCAVTGK-PLTIFGYG 233
Query: 236 GLQTRSFTFIDECVEGVLRLTKS-DFREP--VNIGS--DEMVSMNEMAEIVLSFEDKKLP 290
G Q R + V LR ++ D R+ NIG + VS+ E+ + +K+
Sbjct: 234 GKQVRDVLHSADLVNLYLRQFQNPDRRKGEVFNIGGGRENSVSLLELIALCEEITGRKME 293
Query: 291 IHHIPGPEG-VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWI 333
+ G SD IKEK GW P ++ L Y WI
Sbjct: 294 SYKDENRPGDQIWYISDIRKIKEKPGWKPERDPREILAEIYAWI 337
|
CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337 |
| >gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 83.1 bits (206), Expect = 6e-18
Identities = 71/333 (21%), Positives = 124/333 (37%), Gaps = 43/333 (12%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHMTEDM----FCHEFHLVDLRVMDN 83
I VTG GFI S++ + L G I+ D N +++ D +
Sbjct: 2 IIVTGGAGFIGSNLVKALNERGITDILVVDNLSNGEKFKNLVGLKIADYIDKDDFKDWVR 61
Query: 84 CLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143
++ +F+ A + +M NN + +L + RF YASSA
Sbjct: 62 KGDENFKIEAIFHQGACSDTTET---DGKYMMDNNYQYTKELLHYCLEKKI-RFIYASSA 117
Query: 144 CIY----PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG-R 198
+Y F + +L+ P + YG KL ++ + + K+ + VG R
Sbjct: 118 AVYGNGSLGFAEDIETPNLR--------PLNVYGYSKLLFDQWARRHGKEVLSQV-VGLR 168
Query: 199 FHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFE---------MWGDGLQTRSFTFIDEC 248
+ N+YGP KG M A F E + DG Q R F ++ +
Sbjct: 169 YFNVYGPREYHKGRM--ASVVF--HLFNQIKAGEKVKLFKSSDGYADGEQLRDFVYVKDV 224
Query: 249 VEGVLRLTKSDFREPV-NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGR---- 303
V+ L ++ + N+G+ S N++A K++ I +I PE +RG+
Sbjct: 225 VKVNLFFLENPSVSGIFNVGTGRARSFNDLASATFKALGKEVKIEYIDFPEDLRGKYQSF 284
Query: 304 NSDNTLIKEKLGWAPSMK-LKDGLRITYFWIKE 335
+ G+ L++G++
Sbjct: 285 TEADISKLRAAGYTKEFHSLEEGVKDYVKNYLA 317
|
This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 81.6 bits (202), Expect = 2e-17
Identities = 76/331 (22%), Positives = 117/331 (35%), Gaps = 57/331 (17%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
++ VTGA GFI + +L S G + + + V L + +
Sbjct: 1 KVLVTGANGFIGRALVDKLLSRGEEVRIA---------VRNAENAEPSVVLAELPDIDSF 51
Query: 88 T---KGVDHVFNLAA---DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
T GVD V +LAA M G S NT ++ + A+ GVKRF + S
Sbjct: 52 TDLFLGVDAVVHLAARVHVMNDQG--ADPLSDYRKVNTELTRRLARAAARQGVKRFVFLS 109
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
S + E V + P PQDAYG KL +E G+E + R
Sbjct: 110 SVKVNG-----EGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILRPPM 164
Query: 202 IYGPF--GTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR-LTKS 258
+YGP G + + + + RS +D V+ + ++
Sbjct: 165 VYGPGVRGNFARLMRLIDRGLPLPPGAVK---------NRRSLVSLDNLVDAIYLCISLP 215
Query: 259 DFREPVNIGSDEM-VSMNEMAEIVLSFEDK-KLPIHHIPGPEGVRGRNS----------- 305
+ SD VS AE+V P +P P G+ +
Sbjct: 216 KAANGTFLVSDGPPVS---TAELVDEIRRALGKPTRLLPVPAGLLRFAAKLLGKRAVIQR 272
Query: 306 -------DNTLIKEKLGWAPSMKLKDGLRIT 329
D + +LGW P + L++GL+ T
Sbjct: 273 LFGSLQYDPEKTQNELGWRPPISLEEGLQET 303
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 81.1 bits (201), Expect = 4e-17
Identities = 86/330 (26%), Positives = 139/330 (42%), Gaps = 41/330 (12%)
Query: 28 RISVTGAGGFIASHIARRLKSEG--HYIIASDW------KKNEHMTEDMFCHEFHLVDLR 79
+I VTG GFI S+ R + ++ +++ D +N ED + F D+
Sbjct: 2 KILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDIC 61
Query: 80 VMD--NCLKVTKGVDHVFNLAAD-------MGGMGFIQSNHSVIMYNNTMISFNMLEASR 130
+ + L D V + AA+ G FIQ+N V+ ++ +LEA+R
Sbjct: 62 DRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTN--VVG------TYTLLEAAR 113
Query: 131 ISGVK-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD 189
K RF + S+ +Y + + + E+ P P Y K AS+ L + Y +
Sbjct: 114 KYWGKFRFHHISTDEVYGD--LGLDDDAFTETT--PYNPSSPYSASKAASDLLVRAYVRT 169
Query: 190 FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249
+G+ + R N YGP+ + EK AL ++GDGLQ R + ++++
Sbjct: 170 YGLPATITRCSNNYGPY---QFPEKLIPLMIINALLG-KPLPVYGDGLQIRDWLYVEDHC 225
Query: 250 EGV-LRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLP-----IHHIPGPEGVRGR 303
+ L LTK E NIG + E+ + + K P I + G R
Sbjct: 226 RAIDLVLTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRR 285
Query: 304 NS-DNTLIKEKLGWAPSMKLKDGLRITYFW 332
+ D + IK +LGW P + GLR T W
Sbjct: 286 YAIDASKIKRELGWRPQETFETGLRKTVDW 315
|
Length = 340 |
| >gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Score = 80.0 bits (198), Expect = 7e-17
Identities = 79/330 (23%), Positives = 132/330 (40%), Gaps = 55/330 (16%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK- 86
I VTG GFI S++ + L G I+ D ++ H + L DL + D K
Sbjct: 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFLN-------LADLVIADYIDKE 53
Query: 87 ---------VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRF 137
++ +F+ A +++ +M NN S +L+ G+ F
Sbjct: 54 DFLDRLEKGAFGKIEAIFHQGACSDTT---ETDGEYMMENNYQYSKRLLDWCAEKGIP-F 109
Query: 138 FYASSACIY-------PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF 190
YASSA Y E ++LE P + YG K ++ +
Sbjct: 110 IYASSAATYGDGEAGFREGRELE-------------RPLNVYGYSKFLFDQYVRRRVLPE 156
Query: 191 GIECR-VG-RFHNIYGPFGTWKGMEKAPAAFC------RKALTSTDKFEMWGDGLQTRSF 242
+ + VG R+ N+YGP KG + A + E + DG Q R F
Sbjct: 157 ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDF 216
Query: 243 TFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRG 302
++ + V+ L L ++ N+G+ S N++A+ V K I +IP PE +RG
Sbjct: 217 VYVKDVVDVNLWLLENGVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALRG 276
Query: 303 R-----NSDNTLIKEKLGWAPSMKLKDGLR 327
R +D T ++ + P L++G++
Sbjct: 277 RYQYFTQADITKLRAAGYYGPFTTLEEGVK 306
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 9e-17
Identities = 43/184 (23%), Positives = 70/184 (38%), Gaps = 28/184 (15%)
Query: 29 ISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
I + GA GFI +AR L +GH ++ + K+ ++ DLR +D+
Sbjct: 1 ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPV--AVVEGDLRDLDSLSD 58
Query: 87 VTKGVDHVFNLA-ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
+GVD V +LA A F + + N+LEA++ +GVK F + SS
Sbjct: 59 AVQGVDVVIHLAGAPRDTRDFCEVD-VEGTR-------NVLEAAKEAGVKHFIFISSLGA 110
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
Y + + P Y K +E ++ + + R IYG
Sbjct: 111 YGD-----------LHEETEPSPSSPYLAVKAKTE----AVLREASLPYTIVRPGVIYGD 155
Query: 206 FGTW 209
Sbjct: 156 LARA 159
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 74.1 bits (183), Expect = 9e-15
Identities = 88/340 (25%), Positives = 134/340 (39%), Gaps = 50/340 (14%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKN---EHMTEDMFCH-EFHLVDLR---V 80
++ VTG G+I SH L G+ ++ D N E + EF+ D+R
Sbjct: 1 KVLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSNGHREALPRIEKIRIEFYEGDIRDRAA 60
Query: 81 MDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSV---IMY--NNTMISFNMLEASRISGVK 135
+D K +D V + AA SV + Y NN + + N+LEA R GVK
Sbjct: 61 LDKVFAEHK-IDAVIHFAA------LKAVGESVQKPLKYYDNNVVGTLNLLEAMRAHGVK 113
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
F ++SSA +Y E V + E P P + YG KL E++ + K G+
Sbjct: 114 NFVFSSSAAVYGE----PETVPITEEA--PLNPTNPYGRTKLMVEQILRDLAKAPGLNYV 167
Query: 196 VGRFHNIYG--PFGTWKGMEKAPA----AFCRKALTSTDKFEMWGDGLQTRSFT----FI 245
+ R+ N G P G + P + AL +K ++GD T T +I
Sbjct: 168 ILRYFNPAGAHPSGLIGEDPQIPNNLIPYVLQVALGRREKLAIFGDDYPTPDGTCVRDYI 227
Query: 246 DEC------VEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG 299
V + +L E N+G+ S+ E+ E K +P P G
Sbjct: 228 HVVDLADAHVLALEKLENGGGSEIYNLGTGRGYSVLEVVEAFEKVSGKPIPYEIAPRRAG 287
Query: 300 -----VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIK 334
V +D + +E+LGW P L+D + W
Sbjct: 288 DPASLV----ADPSKAREELGWKPKRDLEDMCEDAWNWQS 323
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 73.0 bits (180), Expect = 2e-14
Identities = 82/326 (25%), Positives = 133/326 (40%), Gaps = 55/326 (16%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-DMFCHEFHLVDLR---VMDN 83
++ VTG G+I SH R+L GH ++ D N H +F+ DL ++
Sbjct: 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTA 61
Query: 84 CLKVTKGVDHVFNLAADMGGMGFIQSNHSV---IMY--NNTMISFNMLEASRISGVKRFF 138
+ K +D V + AA I SV + Y NN + + N++EA +GVK+F
Sbjct: 62 VFEENK-IDAVVHFAA------SISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFI 114
Query: 139 YASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGR 198
++S+A +Y E T + E+ P P + YG KL SEE+ + K + + R
Sbjct: 115 FSSTAAVYGE----PTTSPISETS--PLAPINPYGRSKLMSEEILRDAAKANPFKVVILR 168
Query: 199 FHNIYG-----PFGTWKGMEK--APAAFCRKALTSTDKFEMWGDGLQTRSFTFI------ 245
+ N+ G G P A AL DK ++GD T+ T I
Sbjct: 169 YFNVAGACPDGTLGQRYPGATLLIPVA-AEAALGKRDKLFIFGDDYDTKDGTCIRDYIHV 227
Query: 246 -DEC---VEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVR 301
D V + L + N+GS S+ E+ E + +P+ +
Sbjct: 228 DDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVE-------IA 280
Query: 302 GRNS--------DNTLIKEKLGWAPS 319
R + D++ ++ LGW P+
Sbjct: 281 PRRAGDPAILVADSSKARQILGWQPT 306
|
Length = 329 |
| >gnl|CDD|185103 PRK15181, PRK15181, Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Score = 67.4 bits (164), Expect = 2e-12
Identities = 82/348 (23%), Positives = 140/348 (40%), Gaps = 43/348 (12%)
Query: 13 YEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASD-----WKKNEHMTED 67
YEEL + + R +TG GFI S + L +I D ++ N
Sbjct: 4 YEELRTKLVLAPK--RWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRT 61
Query: 68 MFCHE------FHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFI-QSNHSVIMYNNTM 120
E F D+R +C K K VD+V + AA +G + +S I N+
Sbjct: 62 SVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAA----LGSVPRSLKDPIATNSAN 117
Query: 121 IS--FNMLEASRISGVKRFFYASSACIY---PEFKQLETNVSLKESDAWPAEPQDAYGLE 175
I NML A+R + V F YA+S+ Y P+ ++E + P Y +
Sbjct: 118 IDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERI---------GRPLSPYAVT 168
Query: 176 KLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD 235
K +E + + + R+ N++G G A +L + + GD
Sbjct: 169 KYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGD 228
Query: 236 GLQTRSFTFIDECVEG-VLRLTKSDF---REPVNIGSDEMVSMNEMAEIV-------LSF 284
G +R F +I+ ++ +L T +D + N+ + S+NE+ ++ +
Sbjct: 229 GSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNE 288
Query: 285 EDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332
+ + PI+ V+ +D T IK L + P +K+GL+ T W
Sbjct: 289 QSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKW 336
|
Length = 348 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 4e-12
Identities = 59/265 (22%), Positives = 95/265 (35%), Gaps = 30/265 (11%)
Query: 31 VTGAGGFIASHIARRL-KSEGHYIIASDWKKNEHMTEDMFCH---EFHLVDLRVMDNCLK 86
VTG GF + ++L + G Y+ + D + H EF D+ ++ +
Sbjct: 4 VTGGSGFFGERLVKQLLERGGTYVRSFD-IAPPGEALSAWQHPNIEFLKGDITDRNDVEQ 62
Query: 87 VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS-ACI 145
G D VF+ AA + G V T N+L+A + GV++F Y SS + I
Sbjct: 63 ALSGADCVFHTAAIVPLAGPRDLYWEV-NVGGTQ---NVLDACQRCGVQKFVYTSSSSVI 118
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
+ Q N E+ +P D Y K +E + + R I+GP
Sbjct: 119 FG--GQNIHNGD--ETLPYPPLDSDMYAETKAIAEIIVLEANGRDDLLTCALRPAGIFGP 174
Query: 206 F--GTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE------CVEGVLRLTK 257
G + + A KF ++G G FT++ L K
Sbjct: 175 GDQGLVPILFEW-------AEKGLVKF-VFGRGNNLVDFTYVHNLAHAHILAAAALVKGK 226
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVL 282
+ + I E +M E+ V
Sbjct: 227 TISGQTYFITDAEPHNMFELLRPVW 251
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE | Back alignment and domain information |
|---|
Score = 66.2 bits (162), Expect = 4e-12
Identities = 86/327 (26%), Positives = 134/327 (40%), Gaps = 54/327 (16%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD---------WKKNEHMTEDMFCHEFHLVDL 78
+I VTG G+I SH R+L GH ++ D + E +T F E L D
Sbjct: 1 KILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRGERITPVTFV-EGDLRDR 59
Query: 79 RVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIM----Y-NNTMISFNMLEASRISG 133
++D + K +D V + A G I SV Y NN + + N+LEA + +G
Sbjct: 60 ELLDRLFEEHK-IDAVIHFA------GLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAG 112
Query: 134 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTK-DFGI 192
VK+F ++SSA +Y E + S+ P P + YG KL SE++ + K D
Sbjct: 113 VKKFIFSSSAAVYGEPSSIPI------SEDSPLGPINPYGRSKLMSEQILRDLQKADPDW 166
Query: 193 ECRVGRFHNIYG----------PFGTWKGMEKAPAAFCRKALTSTDKFEMWG------DG 236
+ R+ N+ G P G + A C+ A+ DK ++G DG
Sbjct: 167 SYVILRYFNVAGAHPSGDIGEDPPGITHLIPYA----CQVAVGKRDKLTIFGTDYPTPDG 222
Query: 237 LQTRSFTFIDECVEGVLR----LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIH 292
R + + + + L L N+G + S+ E+ E K P+
Sbjct: 223 TCVRDYIHVMDLADAHLAALEYLLNGGGSHVYNLGYGQGFSVLEVIEAFKKVSGKDFPVE 282
Query: 293 HIPGPEGVRGR-NSDNTLIKEKLGWAP 318
P G +D + I+ +LGW P
Sbjct: 283 LAPRRPGDPASLVADASKIRRELGWQP 309
|
Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328 |
| >gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 63.5 bits (155), Expect = 3e-11
Identities = 81/343 (23%), Positives = 131/343 (38%), Gaps = 61/343 (17%)
Query: 31 VTGAGGFIASHIARRLKSEG---HYII--ASDWKKNE-HMTED-MFCH---EFHLVDLRV 80
+TG G S++A L +G H I +S + H+ ED H DL
Sbjct: 7 ITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTD 66
Query: 81 MDNCLKVTKGV--DHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-- 135
N L++ + V D ++NLAA G+ F Q ++ + + + +LEA RI G K
Sbjct: 67 SSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYT--ADVDAIGTLRLLEAIRILGEKKT 124
Query: 136 RFFYASSACIY---PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGI 192
RF+ AS++ +Y E Q ET P P+ Y + KL + + +Y + +G+
Sbjct: 125 RFYQASTSELYGLVQEIPQKETT---------PFYPRSPYAVAKLYAYWITVNYRESYGL 175
Query: 193 ECRVGRFHNIYGP-----FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247
G N P F T K A R L DK + G+ R + +
Sbjct: 176 FACNGILFNHESPLRGETFVT----RKITRAVARIKLGLQDKLYL-GNLDAKRDWGHAKD 230
Query: 248 CVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDN 307
VE + + + + + I + E S+ E E+ L E +
Sbjct: 231 YVEAMWLMLQQEEPDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGK 290
Query: 308 TLI----------------------KEKLGWAPSMKLKDGLRI 328
++ KEKLGW P + L++ +R
Sbjct: 291 IIVEIDPRYFRPAEVDLLLGDPTKAKEKLGWRPEVSLEELVRE 333
|
Length = 345 |
| >gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 63.2 bits (154), Expect = 3e-11
Identities = 43/195 (22%), Positives = 67/195 (34%), Gaps = 35/195 (17%)
Query: 29 ISVTGAGGFIASHIARRLKS--EGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
I VTGA G + +ARRL + + D ++ + E+ +D+R
Sbjct: 1 ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRRPPGSPPKV---EYVRLDIRDPAAADV 57
Query: 87 VTK-GVDHVFNLAAD----MGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYA 140
+ D V +LA G + N + N+L+A +GV R
Sbjct: 58 FREREADAVVHLAFILDPPRDGA---------ERHRINVDGTQNVLDACAAAGVPRVVVT 108
Query: 141 SSACIY------PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF-GIE 193
SS +Y P L E P+ AY +K E+L + + +
Sbjct: 109 SSVAVYGAHPDNPAP--------LTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELN 160
Query: 194 CRVGRFHNIYGPFGT 208
V R I GP
Sbjct: 161 VTVLRPATILGPGTR 175
|
Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306 |
| >gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 9e-11
Identities = 91/338 (26%), Positives = 143/338 (42%), Gaps = 45/338 (13%)
Query: 19 EPYWPSEKLRISVTGAGGFIASHIARRL-KSEGHYIIAS----DWKKN-EHMTEDMFCHE 72
Y P I +TGA GFIASH+A RL ++ Y I D+ N +++
Sbjct: 2 ATYEPKN---ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPN 58
Query: 73 FHLV--DLRVMD--NCLKVTKGVDHVFNLAADM---GGMGFIQSNHSVIMYNNTMISFNM 125
F V D+ D N L +T+G+D + + AA G N NN + +
Sbjct: 59 FKFVKGDIASADLVNYLLITEGIDTIMHFAAQTHVDNSFG----NSFEFTKNNIYGTHVL 114
Query: 126 LEASRISG-VKRFFYASSACIYPEFKQLETNVSLKE-SDAWPAEPQDAYGLEKLASEELC 183
LEA +++G ++RF + S+ +Y E + +V E S P P Y K +E L
Sbjct: 115 LEACKVTGQIRRFIHVSTDEVYGE-TDEDADVGNHEASQLLPTNP---YSATKAGAEMLV 170
Query: 184 KHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243
Y + +G+ R +N+YGP + EK F A+ + GDG RS+
Sbjct: 171 MAYGRSYGLPVITTRGNNVYGPN---QFPEKLIPKFILLAM-QGKPLPIHGDGSNVRSYL 226
Query: 244 FIDECVEGV-LRLTKSDFREPVNIGSDEMVSMNEMAE-IVLSFE-DKKLPIHHIPGPEGV 300
+ ++ E + L K + NIG+ + + ++A+ I F D + I +
Sbjct: 227 YCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVEN---- 282
Query: 301 RGRN------SDNTLIKEKLGWAPSMKLKDGLRITYFW 332
R N D L KLGW ++GL+ T W
Sbjct: 283 RPFNDQRYFLDDQKLK--KLGWQERTSWEEGLKKTMEW 318
|
Length = 668 |
| >gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 1e-10
Identities = 65/326 (19%), Positives = 121/326 (37%), Gaps = 46/326 (14%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASD---WKKNEHMTE--DMFCHEFHLVDLRVM 81
+++ +TG G I SH+ L GH ++ D + EH+ + ++ E + D ++
Sbjct: 1 MKVLITGGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDHPNLTVVEGSIADKALV 60
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
D K D V + AA + N + N+++A++ +GVKR Y
Sbjct: 61 DKLFGDFKP-DAVVHTAAAYKD----PDDWYEDTLTNVVGGANVVQAAKKAGVKRLIYFQ 115
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
+A Y K ++ + L D A P +Y + K A E +Y + G++ R N
Sbjct: 116 TALCY-GLKPMQQPIRL---DHPRAPPGSSYAISKTAGE----YYLELSGVDFVTFRLAN 167
Query: 202 IYGPFGT-------WKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 254
+ GP ++ ++ F R F F+ + V +
Sbjct: 168 VTGPRNVIGPLPTFYQRLKAGKKCFVTDT---------------RRDFVFVKDLARVVDK 212
Query: 255 LTKSDFREPV-NIGSDEMVSMNEMAEIVLSFED----KKLPIHHIPGPEGVRGRNSDNTL 309
+ S E VS+ E+ + V+ D ++ + GP+ V D +
Sbjct: 213 ALDGIRGHGAYHFSSGEDVSIKELFDAVVEALDLPLRPEVEVVE-LGPDDVPSILLDPSR 271
Query: 310 IKEKLGWAPSMKLKDGLRITYFWIKE 335
+ GW L + + W +
Sbjct: 272 TFQDFGWKEFTPLSETVSAALAWYDK 297
|
Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307 |
| >gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 2e-09
Identities = 81/353 (22%), Positives = 131/353 (37%), Gaps = 71/353 (20%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIA----SDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
V G GF+ H+ +L G+ + + + + +FH DL + K
Sbjct: 4 VVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDPSSSGRV--QFHTGDLTDPQDLEK 61
Query: 87 V--TKGVDHVFNLAADMGGMG-FIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143
KG + VF+ A+ G + + V + N++EA R GVK+ Y SSA
Sbjct: 62 AFNEKGPNVVFHTASPDHGSNDDLY--YKVNVQGTR----NVIEACRKCGVKKLVYTSSA 115
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL---CKHYTKDFGIECRVGRFH 200
+ + + ++ ES +P + QDAY K +E+L + C + R
Sbjct: 116 SVVFNGQDI---INGDESLPYPDKHQDAYNETKALAEKLVLKANDPESGL-LTCAL-RPA 170
Query: 201 NIYGPFGT--WKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVL----R 254
I+GP G+ KA A KF GDG FT+++ +
Sbjct: 171 GIFGPGDRQLVPGLLKA-------AKNGKTKF-QIGDGNNLFDFTYVENVAHAHILAADA 222
Query: 255 LTKSDFREPVN-----IGSDEMVSMNEMAEIV---LSFEDK---KLP------------- 290
L S E V I +DE + + A + L +E KLP
Sbjct: 223 LLSSSHAETVAGEAFFITNDEPIYFWDFARAIWEGLGYERPPSIKLPRPVALYLASLLEW 282
Query: 291 IHHIPGPEG------VR----GRNSDNTLIKEKLGWAPSMKLKDGLRITYFWI 333
+ G E V R + K++LG+ P + L++G+ T W
Sbjct: 283 TCKVLGKEPTFTPFRVALLCSTRYFNIEKAKKRLGYTPVVTLEEGIERTLQWF 335
|
This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 3e-09
Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 19/163 (11%)
Query: 31 VTGAGGFIASHIARRLKSEGHY-------IIASDWKKNEHMT-EDMFCHEFHLVDLRVMD 82
VTG GGF+ HI R L EG + S + + + E D+
Sbjct: 2 VTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVITYIE---GDVTDKQ 58
Query: 83 NCLKVTKGVDHVFNLAA--DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYA 140
+ + +G D V + AA D+ G + + V T N+L+A +GV+ Y
Sbjct: 59 DLRRALQGSDVVIHTAAIIDVFGKAYRDTIMKVN-VKGTQ---NVLDACVKAGVRVLVYT 114
Query: 141 SSA-CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL 182
SS + P + V+ E+ + + QD Y K +E+L
Sbjct: 115 SSMEVVGPNSYG-QPIVNGDETTPYESTHQDPYPESKALAEKL 156
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 6e-09
Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 22/161 (13%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLV-----DLRVMDNCL 85
VTGA GF+ S++ R L ++G+ + A ++ + +V D + +
Sbjct: 3 VTGATGFLGSNLVRALLAQGYRVRA--LVRSGSDAVLLDGLPVEVVEGDLTDAASLAAAM 60
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMY-NNTMISFNMLEASRISGVKRFFYASS-A 143
KG D VF+LAA + + +Y N + N+L+A+ +GV+R + SS A
Sbjct: 61 ---KGCDRVFHLAAFTS----LWAKDRKELYRTNVEGTRNVLDAALEAGVRRVVHTSSIA 113
Query: 144 CIYPEFKQLETNVSLKESDAWPAEP-QDAYGLEKLASEELC 183
+ + + E+ W P + Y KL +E
Sbjct: 114 AL-----GGPPDGRIDETTPWNERPFPNDYYRSKLLAELEV 149
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 1e-07
Identities = 44/176 (25%), Positives = 69/176 (39%), Gaps = 37/176 (21%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-DMFCHEF---------HLVD 77
++ +TGA GF+ +A RL S+ NE + D+ + D
Sbjct: 2 KVLITGASGFVGQRLAERLLSDVP---------NERLILIDVVSPKAPSGAPRVTQIAGD 52
Query: 78 LRVMDNCLKVTKGV-DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VK 135
L V + G D VF+LAA + G +++ + N + N+LEA R +G
Sbjct: 53 LAVPALIEALANGRPDVVFHLAAIVSGGA--EADFDLGYRVNVDGTRNLLEALRKNGPKP 110
Query: 136 RFFYASSACIY----PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYT 187
RF + SS +Y P T +P +YG +K E L Y+
Sbjct: 111 RFVFTSSLAVYGLPLPNPVTDHT----------ALDPASSYGAQKAMCELLLNDYS 156
|
Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|178047 PLN02427, PLN02427, UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 1e-07
Identities = 85/357 (23%), Positives = 148/357 (41%), Gaps = 53/357 (14%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEG-HYIIASDW--KKNEHMTEDMFCH-----EFH 74
P + L I + GAGGFI SH+ +L +E H ++A D K +H+ E +FH
Sbjct: 11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFH 70
Query: 75 LVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV 134
++++ + K D NLAA + I Y+N + + +++ +
Sbjct: 71 RINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTI-YSNFIDALPVVKYCSENN- 128
Query: 135 KRFFYASSACIY--------PEFKQLETNVS---LKESDA----WPAEPQD-AYGLEKLA 178
KR + S+ +Y P+ L + + LKE ++ E Q +Y K
Sbjct: 129 KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQL 188
Query: 179 SEELCKHYTKDFGIECRVGRFHNIYGPF--------GTWKGMEKAPAAFCRKALTSTDKF 230
E L + G+E + R N GP G +G+ + A F L +
Sbjct: 189 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF-SNNLLRREPL 247
Query: 231 EMWGDGLQTRSFTFIDECVEGVLRLTKSDFR---EPVNIGS-DEMVSMNEMAEIVLSFED 286
++ G R+F +I + +E VL + ++ R N+G+ + V++ ++AE++
Sbjct: 248 KLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYA 307
Query: 287 K-------KLPIHHIPGPE--GVRGRNSDN-----TLIKEKLGWAPSMKLKDGLRIT 329
K + P + E G +SD T+I ++LGW P L D L T
Sbjct: 308 KVSGEPALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLEST 364
|
Length = 386 |
| >gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 14/118 (11%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHE---FHLVDLRVMDNCL 85
+ VTGA G++ + RL EGH + A ++ D E DL ++
Sbjct: 1 VLVTGATGYVGGRLVPRLLQEGHQVRAL--VRSPEKLADRPWSERVTVVRGDLEDPESLR 58
Query: 86 KVTKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
+G+D + L MG G F +++ + N A+R +GVKR Y
Sbjct: 59 AALEGIDTAYYLVHSMGSGGDFEEADR--------RAARNFARAARAAGVKRIIYLGG 108
|
This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 6e-07
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 31/184 (16%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIA-----SDWKKNEHMTE--DMFCH-EFHLVDLRVMD 82
VTGA GF+ASH+ +L G+ + A S KK H+ + E + DL
Sbjct: 3 VTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTDEQ 62
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI------SFNMLEASRISG-VK 135
+ +V KG VF++A + N +I + N L+A+ + VK
Sbjct: 63 SFDEVIKGCAGVFHVATPV---------SFSSKDPNEVIKPAIGGTLNALKAAAAAKSVK 113
Query: 136 RFFYASSA-CI-YPEFKQL-----ETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTK 188
RF SSA + P+ E + +L+E D+ P + Y K +E+ +
Sbjct: 114 RFVLTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWVYAASKTLAEKAAWKFAD 173
Query: 189 DFGI 192
+ I
Sbjct: 174 ENNI 177
|
This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 6e-07
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKG 90
VTGA GF+ S + R L +G + ++ + E DLR + K G
Sbjct: 5 VTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAG 64
Query: 91 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS-ACI 145
+F++AAD + + N + N+L A+ +GV+R Y SS A +
Sbjct: 65 CRALFHVAAD---YRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATL 117
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 9e-07
Identities = 59/278 (21%), Positives = 100/278 (35%), Gaps = 62/278 (22%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHY---IIASDWKKNEHMTEDMFCHE------FHLVDL 78
I VTG G I S + R++ G + D K + ++ F + D+
Sbjct: 4 TILVTGGAGSIGSELVRQILKFGPKKLIVFDRDENKLHELVRELRSRFPHDKLRFIIGDV 63
Query: 79 R--VMDNCLKVTKGVDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEASRISG 133
R +G D VF+ AA + + S N + N + + N+++A+ +G
Sbjct: 64 RDKERLRRAFKERGPDIVFHAAA----LKHVPSMEDNPEEAIKTNVLGTKNVIDAAIENG 119
Query: 134 VKRFFYASS--ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHY-TKDF 190
V++F S+ A P + G K +E+L
Sbjct: 120 VEKFVCISTDKA----------------------VNPVNVMGATKRVAEKLLLAKNEYSS 157
Query: 191 GIECRVGRFHNIYGPFGT-----WKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245
+ RF N+ G G+ K ++K LT TD +M TR F I
Sbjct: 158 STKFSTVRFGNVLGSRGSVLPLFKKQIKK------GGPLTVTDP-DM------TRFFMTI 204
Query: 246 DECVEGVLR-LTKSDFREPVNIGSDEMVSMNEMAEIVL 282
E V+ VL+ D + V + ++AE ++
Sbjct: 205 PEAVDLVLQACILGDGGGIFLLDMGPPVKILDLAEALI 242
|
UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 1e-06
Identities = 67/314 (21%), Positives = 113/314 (35%), Gaps = 48/314 (15%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
+I +TGA G + + R LK G+ +I + +DL D +
Sbjct: 1 KILITGATGMLGRALVRLLKERGYEVIGTGRS----------RASLFKLDLTDPDAVEEA 50
Query: 88 TKGV--DHVFNLAA----DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ D + N AA D +S+ + N + N+ A++ G R + S
Sbjct: 51 IRDYKPDVIINCAAYTRVDK-----CESDPELAYRVNVLAPENLARAAKEVGA-RLIHIS 104
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
+ ++ KE DA P P + YG KL E + + I R
Sbjct: 105 TDYVFDG-----KKGPYKEEDA-PN-PLNVYGKSKLLGEVAVLNANPRYLI-LRTS---- 152
Query: 202 IYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT-KSDF 260
+G K E R A + + D Q S T+ + + +L L ++
Sbjct: 153 --WLYGELKNGENFVEWMLRLAAER-KEVNVVHD--QIGSPTYAADLADAILELIERNSL 207
Query: 261 REPVNIGSDEMVSMNEMAEI---VLSFEDKKL-PIHHIPGPEGVRG-RNS--DNTLIKEK 313
++ + +S E A++ L D ++ PI P R NS D + ++E
Sbjct: 208 TGIYHLSNSGPISKYEFAKLIADALGLPDVEIKPITSSEYPLPARRPANSSLDCSKLEEL 267
Query: 314 LGWAPSMKLKDGLR 327
G P K+ LR
Sbjct: 268 GGIKP-PDWKEALR 280
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 2e-06
Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 25/133 (18%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIA-----SDWKKNEHMTE-DMFCHEFHLV--DLRVMD 82
VTGA GFI S + +RL G+ + A D KK H+ E + L DL
Sbjct: 3 VTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEGAKERLKLFKADLLDYG 62
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISF------NMLEA-SRISGVK 135
+ G D VF++A+ + S MI N+LEA ++ VK
Sbjct: 63 SFDAAIDGCDGVFHVASPVD----FDSEDP----EEEMIEPAVKGTLNVLEACAKAKSVK 114
Query: 136 RFFYASS--ACIY 146
R + SS A ++
Sbjct: 115 RVVFTSSVAAVVW 127
|
This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 2e-06
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 28 RISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL 85
+I VTGA GF+ + R L + GH + + + + E L DLR + +
Sbjct: 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAGGV---EVVLGDLRDPKSLV 58
Query: 86 KVTKGVDHVFNLAADMGG 103
KGVD V ++ + G
Sbjct: 59 AGAKGVDGVLLISGLLDG 76
|
Length = 275 |
| >gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 3e-06
Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 29/172 (16%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIAS--DWKKNEHMTEDMFCH-------EFHLVDLRVM 81
VTGA GFIASHI +L G+ + + K+ + + EF +VD
Sbjct: 4 VTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKA-LLKAAGYNDRLEFVIVDDLTA 62
Query: 82 DNCLK-VTKGVDHVFNLAADMGGMGFIQSNHSVI--MYNNTMISFNMLEASRISG-VKRF 137
N KGVD+V ++A+ + VI T+ N+LEA++ +G VKR
Sbjct: 63 PNAWDEALKGVDYVIHVASPF-PFTGPDAEDDVIDPAVEGTL---NVLEAAKAAGSVKRV 118
Query: 138 FYASS--ACIYPEFKQLETNVSLKESDAW------PAEPQDAYGLEKLASEE 181
SS A P + E D W + DAY K +E+
Sbjct: 119 VLTSSVAAVGDPTAED--PGKVFTEED-WNDLTISKSNGLDAYIASKTLAEK 167
|
This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301 |
| >gnl|CDD|187571 cd05261, CAPF_like_SDR_e, capsular polysaccharide assembling protein (CAPF) like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 39/178 (21%), Positives = 69/178 (38%), Gaps = 43/178 (24%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
++I +TGA GFI ++ RLK + I ++++ D F
Sbjct: 1 MKILITGAKGFIGKNLIARLKEQKDDDIFFYDRESDESELDDFL---------------- 44
Query: 87 VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146
+G D +F+LA G+ + N ++ +L+A +G K
Sbjct: 45 --QGADFIFHLA----GVNRPKDEAE-FESGNVGLTERLLDALTRNGKK----------- 86
Query: 147 PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
+ S + A + YG KLA+EEL + Y ++ G + R N++G
Sbjct: 87 ---------PPILLSSSIQAALDNPYGKSKLAAEELLQEYARETGAPVYIYRLPNVFG 135
|
This subgroup of extended SDRs, includes some members which have been identified as capsular polysaccharide assembling proteins, such as Staphylococcus aureus Cap5F which is involved in the biosynthesis of N-acetyl-l-fucosamine, a constituent of surface polysaccharide structures of S. aureus. This subgroup has the characteristic active site tetrad and NAD-binding motif of extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 248 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 3e-05
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIA----SDWKKNEHMTEDMFCHEFHLVDLRVMDN 83
++V GA GFI ++ RL G +I + + + D+ F DLR ++
Sbjct: 2 VVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQVLFVEFDLRDDES 61
Query: 84 CLKVTKGVDHVFNLAA 99
K +G D V NL
Sbjct: 62 IRKALEGSDVVINLVG 77
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 6e-05
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 24/126 (19%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIA-----SDWKKNEHMTEDMFCHEFHLVDLRVMD 82
++ V GA G + H+ R L G+ + A S +K E ++ + DL +
Sbjct: 1 KVLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVV-----VGDLTDAE 55
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISF----NMLEASRISGVKRFF 138
+ +G+D V + AA GG G + + N+++A++ +GVKRF
Sbjct: 56 SLAAALEGIDAVIS-AAGSGGKG---------GPRTEAVDYDGNINLIDAAKKAGVKRFV 105
Query: 139 YASSAC 144
SS
Sbjct: 106 LVSSIG 111
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|182313 PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 6e-05
Identities = 68/353 (19%), Positives = 126/353 (35%), Gaps = 73/353 (20%)
Query: 28 RISVTGAGGFIASHIAR--------------RLKSEGHYIIASDWKKNEHMTEDMFCHEF 73
+I +TG GFI S + R +L G+ + + ++E + +
Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFE----KV 58
Query: 74 HLVDLRVMDNCLKVTKGVDHVFNLAADM-------GGMGFIQSNHSVIMYNNTMISFNML 126
+ D + + D V +LAA+ G FI++N + ++ +L
Sbjct: 59 DICDRAELARVFTEHQP-DCVMHLAAESHVDRSIDGPAAFIETN--------IVGTYTLL 109
Query: 127 EASRI---------SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 177
EA+R RF + S+ +Y + + + + P P Y K
Sbjct: 110 EAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT----ETTPYAPSSPYSASKA 165
Query: 178 ASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237
+S+ L + + + +G+ + N YGP+ EK AL ++G+G
Sbjct: 166 SSDHLVRAWLRTYGLPTLITNCSNNYGPY---HFPEKLIPLMILNALAGK-PLPVYGNGQ 221
Query: 238 QTRSFTFIDECVEGVLR-LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG 296
Q R + ++++ + T E NIG ++ E + ++ P
Sbjct: 222 QIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAP----NK 277
Query: 297 PEGVRGRNS-----------------DNTLIKEKLGWAPSMKLKDGLRITYFW 332
P+GV D + I +LGW P + G+R T W
Sbjct: 278 PQGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTVQW 330
|
Length = 355 |
| >gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 13/164 (7%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-----EDMFCHEFHLVDLRVM 81
+R+ VTG G+I SH +L GH ++ D N + E + V+ +
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFI-QSNHSVIMY--NNTMISFNMLEASRISGVKRFF 138
+ L DH + G+ + +S + Y NN + ++ A R + VK
Sbjct: 61 NEALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLI 120
Query: 139 YASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL 182
++SSA +Y + ++ S PQ YG KL E++
Sbjct: 121 FSSSATVYGDQPKIPYVESFPT-----GTPQSPYGKSKLMVEQI 159
|
Length = 338 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 42/214 (19%), Positives = 75/214 (35%), Gaps = 40/214 (18%)
Query: 31 VTGAGGFIASHIARRLKSEGH--YIIA---SDWKKNEHMTEDMFCHEFHLVDLRVM---- 81
VTG GF+ H+ +RL G ++ S + +E + E + + L
Sbjct: 3 VTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADR-VRVLEGDLTQP 61
Query: 82 ------DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135
++ VDHV + AA Q+ + N + ++LE + ++
Sbjct: 62 NLGLSAAASRELAGKVDHVIHCAASY----DFQAPNEDAWRTNIDGTEHVLELAARLDIQ 117
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ-DAYGLEKLASEELCKHYTKDFGIEC 194
RF Y S+A Y + +E++ P + + Y K +E+L + I
Sbjct: 118 RFHYVSTA--YVAGNREGNI---RETELNPGQNFKNPYEQSKAEAEQLVRAAATQ--IPL 170
Query: 195 RV------------GRFHNIYGPFGTWKGMEKAP 216
V GR I G + + K
Sbjct: 171 TVYRPSIVVGDSKTGRIEKIDGLYELLNLLAKLG 204
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 51/179 (28%), Positives = 75/179 (41%), Gaps = 39/179 (21%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKN------EHMTE-------DMFCHEFH 74
I VTG G+I SH +L G+ ++ D N + E ++ FH
Sbjct: 7 TILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNL---VFH 63
Query: 75 LVDLRVMDNCLKV--TKGVDHVFNLAADMGGMGFIQSNHSV---IMY--NNTMISFNMLE 127
VDLR + KV + D V + A G SV ++Y NN + + N+LE
Sbjct: 64 KVDLRDKEALEKVFASTRFDAVIHFA------GLKAVGESVAKPLLYYDNNLVGTINLLE 117
Query: 128 ASRISGVKRFFYASSACIY--PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184
G K+ ++SSA +Y PE V E +P + YG KL EE+C+
Sbjct: 118 VMAKHGCKKLVFSSSATVYGQPE------EVPCTEE--FPLSATNPYGRTKLFIEEICR 168
|
Length = 352 |
| >gnl|CDD|183375 PRK11908, PRK11908, NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 5e-04
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 25/130 (19%)
Query: 236 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGS-DEMVSMNEMAEIVLSF------ 284
G Q R+FT ID+ ++ ++++ ++ + NIG+ S+ E+A +L
Sbjct: 217 GSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPE 276
Query: 285 ---EDKKLPI-------HHIPGPEGVRGR--NSDNTLIKEKLGWAPSMKLKDGLRITYFW 332
KK+ + ++ G + V+ R DNT ++LGWAP + D LR +
Sbjct: 277 YAESAKKVKLVETTSGAYYGKGYQDVQNRVPKIDNT--MQELGWAPKTTMDDALRRIFEA 334
Query: 333 IKEQIEKEKT 342
+ + + +
Sbjct: 335 YRGHVAEARA 344
|
Length = 347 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 8e-04
Identities = 53/261 (20%), Positives = 91/261 (34%), Gaps = 41/261 (15%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
++I +TGA G + + + R L E I + +D+ D L+
Sbjct: 1 MKILITGANGQLGTELRRALPGEFEVIATD--RAE--------------LDITDPDAVLE 44
Query: 87 VTKGV--DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144
V + D V N AA + +S + N + N+ A+ G R + S+
Sbjct: 45 VIRETRPDVVINAAA-YTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDY 102
Query: 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRV-GRFHNIY 203
++ E KE+D P + YG KLA EE + I R +
Sbjct: 103 VFD----GEKGGPYKETD--TPNPLNVYGRSKLAGEEAVRAAGPRHLI-LRTSWVYGEYG 155
Query: 204 GPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREP 263
F M + K L D Q S T+ ++ + +L L + +
Sbjct: 156 NNFVKT--MLRLAKE--GKELKVVDD--------QYGSPTYTEDLADAILELLEKEKEGG 203
Query: 264 V-NIGSDEMVSMNEMAEIVLS 283
V ++ + S E A+ +
Sbjct: 204 VYHLVNSGECSWYEFAKAIFE 224
|
Length = 281 |
| >gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 8e-04
Identities = 58/243 (23%), Positives = 90/243 (37%), Gaps = 29/243 (11%)
Query: 118 NTMISFNMLEASRISG-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEK 176
N M + N+LEA R +G VK +S Y + E +E+D P D Y K
Sbjct: 102 NVMGTVNLLEAIRETGSVKAVVNVTSDKCY---ENKEWGWGYREND--PLGGHDPYSSSK 156
Query: 177 LASEELCKHYTKDF---------GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTST 227
+E + Y F GI R N+ G G W P C +A +
Sbjct: 157 GCAELIISSYRNSFFNPENYGKHGIAIASARAGNVIGG-GDWAEDRIVPD--CIRAFEAG 213
Query: 228 DKFEMWGDGLQTRSFTFIDECVEGVLRLTK------SDFREPVNIGSD--EMVSMNEMAE 279
++ + R + + E + G L L + ++ E N G D + V++ E+ E
Sbjct: 214 ERVIIRNPN-AIRPWQHVLEPLSGYLLLAEKLYERGEEYAEAWNFGPDDEDAVTVLELVE 272
Query: 280 IVLS-FEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQI 337
+ + + P D + K LGW P L++ L T W KE +
Sbjct: 273 AMARYWGEDARWDLDGNSHPHEANLLKLDCSKAKTMLGWRPRWNLEETLEFTVAWYKEWL 332
Query: 338 EKE 340
E
Sbjct: 333 SGE 335
|
This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336 |
| >gnl|CDD|182998 PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.001
Identities = 73/299 (24%), Positives = 118/299 (39%), Gaps = 53/299 (17%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHMTEDMFCHEF-HLVDLRVMDNCLK 86
I VTG GFI S+I + L +G I+ D K+ +F +LVDL + D K
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG--------TKFVNLVDLDIADYMDK 53
Query: 87 VTKGVDHVFNLAA--DMGGMGFI----------QSNHSVIMYNNTMISFNMLEASRISGV 134
D + + A D G + I + + +M NN S +L +
Sbjct: 54 ----EDFLAQIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI 109
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
F YASSA Y T+ ++E + +P + YG K +E + + +
Sbjct: 110 P-FLYASSAATYGG----RTDDFIEEREY--EKPLNVYGYSKFLFDEYVRQILPEANSQI 162
Query: 195 RVGRFHNIYGPFGTWKGMEKAPAAF----------CRKALTSTDKFEMWGDGLQTRSFTF 244
R+ N+YGP KG A AF K ++ F+ R F +
Sbjct: 163 CGFRYFNVYGPREGHKG-SMASVAFHLNNQLNNGENPKLFEGSENFK--------RDFVY 213
Query: 245 IDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGR 303
+ + L ++ N G+ S +A+ VL++ K I +IP P+ ++GR
Sbjct: 214 VGDVAAVNLWFWENGVSGIFNCGTGRAESFQAVADAVLAYHKKG-EIEYIPFPDKLKGR 271
|
Length = 308 |
| >gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 18/178 (10%)
Query: 28 RISVTGAGGFIASHIARRLKSE-GH-YIIASDWKKNEHMTEDMFCHE-FHLVDLRVMDNC 84
RI +TG G I S +A+ L+ G +IASD +K + F +D+ +
Sbjct: 1 RILITGGLGQIGSELAKLLRKRYGKDNVIASDIRKPP---AHVVLSGPFEYLDVLDFKSL 57
Query: 85 LKVTK--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
++ + + +LAA + +G + N + N N+LE +R R F S+
Sbjct: 58 EEIVVNHKITWIIHLAALLSAVG--EKNPPLAWDVNMNGLHNVLELAR-EHNLRIFVPST 114
Query: 143 -ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRF 199
P + T D P+ YG+ K+A+E L ++Y FG++ R R+
Sbjct: 115 IGAFGPTTPRNNT------PDDTIQRPRTIYGVSKVAAELLGEYYHHKFGVDFRSLRY 166
|
This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308 |
| >gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 50/281 (17%), Positives = 91/281 (32%), Gaps = 52/281 (18%)
Query: 28 RISVTGAGGFIASHIARRLKSEGH---YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNC 84
+I++ GA G + I L + ++ + + + VD ++
Sbjct: 1 KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNEFQPSGVK-VVPVDYASHESL 59
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144
+ KGVD V + G I +++A+ +GVKRF
Sbjct: 60 VAALKGVDAVISAL----GGAAIGDQL------------KLIDAAIAAGVKRFI------ 97
Query: 145 IYP-EFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIY 203
P EF + D + EK + K+ G+
Sbjct: 98 --PSEF-------GVDYDRIGALPLLDLFD-EKRDVRRYLR--AKNAGLPWT--YVST-- 141
Query: 204 GPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR-LTKSD--F 260
G F + +E + ++GDG +FT +++ V R LT D
Sbjct: 142 GMFLDY-LLEPLFGVV----DLANRTATIYGDGETKFAFTTLEDIGRAVARALTHPDRTL 196
Query: 261 REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVR 301
V + D V+ NE+ +V +K ++ E +
Sbjct: 197 NRVVFVAGDV-VTQNELIALVERVTGRKFERTYVSEEELLE 236
|
PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282 |
| >gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 63/249 (25%), Positives = 101/249 (40%), Gaps = 59/249 (23%)
Query: 28 RISVTGAGGFIASHIARRLKSEG--HYIIAS-DWKKNEHMTEDM---FCHE---FHLVDL 78
+ VTG GG I S + R++ I+ S D K + ++ F F++ D+
Sbjct: 252 TVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDV 311
Query: 79 RVMDNCLKVTKG--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKR 136
R D + +G VD VF+ AA + + ++ N + N + + N+ EA+ +GVK+
Sbjct: 312 RDRDRVERAMEGHKVDIVFHAAA-LKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKK 370
Query: 137 F-FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE-- 193
F ++ + P TNV G K +E+L + ++
Sbjct: 371 FVLISTDKAVNP------TNV---------------MGATKRLAEKLFQAANRNVSGTGT 409
Query: 194 --CRVGRFHNIYG------PFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245
C V RF N+ G P + E P LT TD +M TR F I
Sbjct: 410 RFCVV-RFGNVLGSRGSVIPLFKKQIAEGGP-------LTVTDP-DM------TRFFMTI 454
Query: 246 DECVEGVLR 254
E V+ VL+
Sbjct: 455 PEAVQLVLQ 463
|
Length = 588 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.004
Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 7/104 (6%)
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
++ + VD + + AA + +S + N + + +L ++ F + S+A +
Sbjct: 81 ELAEEVDVIIHNAATVN----FVEPYSDLRATNVLGTREVLRLAKQMKKLPFHHVSTAYV 136
Query: 146 YPEFKQLETNVSLKESDAWPAEPQD---AYGLEKLASEELCKHY 186
E L K + PA Y K +E+L +
Sbjct: 137 NGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSKWLAEQLVREA 180
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 374 | |||
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 100.0 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 100.0 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 100.0 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 100.0 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 100.0 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 100.0 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 100.0 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 100.0 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 100.0 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 100.0 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 100.0 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 100.0 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 100.0 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 100.0 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 100.0 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 100.0 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 100.0 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 100.0 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 100.0 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 100.0 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 100.0 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 100.0 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 100.0 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 100.0 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 100.0 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 100.0 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 100.0 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 100.0 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 100.0 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 100.0 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 100.0 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 100.0 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 100.0 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 100.0 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 100.0 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.98 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.97 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.97 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.96 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.96 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.96 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.96 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.95 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.95 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.95 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.95 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.94 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.93 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.92 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.92 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.91 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.91 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.91 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.9 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.89 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.89 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.88 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.87 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.86 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.86 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.86 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.85 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.85 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.84 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.83 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.83 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.83 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.82 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.82 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.82 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.82 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.82 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.82 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.82 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.81 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.81 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.81 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.8 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.8 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.79 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.79 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.78 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.78 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.77 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.77 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.77 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.77 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.77 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.77 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.77 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.77 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.76 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.76 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.76 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.75 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.75 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.75 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.75 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.75 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.75 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.75 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.74 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.74 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.74 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.74 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.74 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.73 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.73 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.73 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.73 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.72 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.72 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.72 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.71 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.71 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.71 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.71 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.7 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.7 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.7 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.69 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.68 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.68 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.67 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.67 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.66 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.66 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.66 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.66 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.65 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.65 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.64 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.64 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.64 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.64 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.63 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.63 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.63 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.63 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.63 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.63 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.62 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.62 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.61 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.61 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.6 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.59 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.58 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.58 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.57 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.57 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.55 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.55 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.54 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.54 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.54 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.54 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.53 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.53 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.53 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.51 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.51 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.5 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.5 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.5 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.49 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.48 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.48 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.47 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.47 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.47 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.46 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.42 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.42 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.39 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.38 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.38 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.36 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.36 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.34 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.3 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.29 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.27 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.24 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.24 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.19 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 99.11 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.1 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 99.08 | |
| PLN00106 | 323 | malate dehydrogenase | 99.08 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.05 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.05 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.05 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 98.99 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.99 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.88 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.82 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.75 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.74 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.7 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.66 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.63 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 98.62 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 98.48 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 98.47 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.45 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.45 | |
| PF13950 | 62 | Epimerase_Csub: UDP-glucose 4-epimerase C-term sub | 98.38 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.2 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 98.2 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 98.18 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 98.17 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 98.1 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 98.1 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 98.08 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.05 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 98.05 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 98.0 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.97 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 97.95 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.92 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.92 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.9 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 97.86 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 97.85 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 97.84 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.84 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 97.81 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.81 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.8 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 97.72 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 97.71 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.69 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.67 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 97.66 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 97.66 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 97.66 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.63 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 97.63 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.59 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 97.57 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.52 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.52 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.5 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.48 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.46 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.44 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.42 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 97.4 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 97.39 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 97.39 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 97.33 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.32 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.3 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 97.27 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 97.26 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 97.26 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 97.25 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.25 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.23 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 97.23 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 97.21 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.21 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 97.17 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 97.16 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 97.14 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 97.13 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 97.13 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 97.09 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 97.08 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 97.07 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 97.07 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.06 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 97.05 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 97.04 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 97.03 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 97.03 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 97.02 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 97.02 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.99 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 96.97 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.97 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 96.95 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.95 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.94 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 96.91 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 96.91 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 96.9 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.89 | |
| TIGR02717 | 447 | AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP | 96.88 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 96.86 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.86 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.85 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 96.85 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 96.85 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 96.83 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 96.83 | |
| PF13380 | 116 | CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 | 96.83 | |
| COG2099 | 257 | CobK Precorrin-6x reductase [Coenzyme metabolism] | 96.81 | |
| PRK08223 | 287 | hypothetical protein; Validated | 96.8 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 96.79 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.77 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 96.76 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.76 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 96.75 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 96.74 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.73 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 96.72 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 96.72 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 96.71 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.71 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.7 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 96.7 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 96.7 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 96.7 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.67 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 96.66 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 96.64 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 96.64 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 96.63 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 96.63 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.62 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 96.62 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 96.62 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 96.59 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 96.58 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 96.57 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 96.56 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.54 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 96.53 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.53 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.52 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.51 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.49 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.47 | |
| PLN02353 | 473 | probable UDP-glucose 6-dehydrogenase | 96.47 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 96.46 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.46 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.45 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 96.44 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.43 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 96.43 | |
| TIGR00036 | 266 | dapB dihydrodipicolinate reductase. | 96.41 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 96.39 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 96.38 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.37 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 96.36 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 96.36 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.34 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.33 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.33 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.3 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.3 | |
| PRK10537 | 393 | voltage-gated potassium channel; Provisional | 96.29 | |
| PRK07411 | 390 | hypothetical protein; Validated | 96.29 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 96.29 | |
| PRK05808 | 282 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.24 | |
| PRK06444 | 197 | prephenate dehydrogenase; Provisional | 96.23 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 96.22 | |
| PRK06901 | 322 | aspartate-semialdehyde dehydrogenase; Provisional | 96.2 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 96.19 | |
| PRK06249 | 313 | 2-dehydropantoate 2-reductase; Provisional | 96.19 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 96.19 | |
| PRK08229 | 341 | 2-dehydropantoate 2-reductase; Provisional | 96.18 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 96.18 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.17 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.16 | |
| COG0027 | 394 | PurT Formate-dependent phosphoribosylglycinamide f | 96.16 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 96.14 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.12 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 96.09 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 96.08 | |
| PLN02948 | 577 | phosphoribosylaminoimidazole carboxylase | 96.06 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.05 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 96.04 | |
| PRK04207 | 341 | glyceraldehyde-3-phosphate dehydrogenase; Provisio | 96.04 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.04 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 96.03 | |
| TIGR01724 | 341 | hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome | 96.02 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 96.01 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 96.0 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 95.99 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.99 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 95.98 | |
| PLN02928 | 347 | oxidoreductase family protein | 95.97 | |
| PLN02775 | 286 | Probable dihydrodipicolinate reductase | 95.97 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 95.95 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 95.94 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 95.94 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 95.92 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 95.92 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 95.92 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 95.92 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 95.92 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 95.91 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 95.91 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 95.9 | |
| PRK15057 | 388 | UDP-glucose 6-dehydrogenase; Provisional | 95.89 | |
| PLN02545 | 295 | 3-hydroxybutyryl-CoA dehydrogenase | 95.88 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 95.88 |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-56 Score=415.17 Aligned_cols=368 Identities=93% Similarity=1.476 Sum_probs=313.8
Q ss_pred ccccchhhhhccCCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhh
Q 017290 7 TYGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86 (374)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~ 86 (374)
++++|++.++++.+.|+...|+||||||+||||+++++.|+++||+|++++|.............+++.+|+++.+.+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 81 (370)
T PLN02695 2 SYGAYTLAELEREPYWPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLK 81 (370)
T ss_pred CccccchhhcCCCCCCCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHH
Confidence 57899999999999999999999999999999999999999999999999987543222112235788899999988888
Q ss_pred hccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 87 VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 87 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
+++++|+|||+|+..+.......++...+..|+.++.+++++|++.++++|||+||.++|+.......+.++.|++.++.
T Consensus 82 ~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~ 161 (370)
T PLN02695 82 VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 161 (370)
T ss_pred HHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCC
Confidence 88899999999987543223333445567789999999999999999999999999999997543222224667664567
Q ss_pred CCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEeeCCCcccccceeH
Q 017290 167 EPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
.|.+.|+.+|..+|.+++.+....+++++++||+.+|||+..+.. ....+..++...+..+.++.+++++++.++|+|+
T Consensus 162 ~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v 241 (370)
T PLN02695 162 EPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFI 241 (370)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeH
Confidence 788999999999999999999888999999999999999754322 2234566777766656788888999999999999
Q ss_pred HHHHHHHHhhhccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCCCcccccchHHHHHhcCCCcCCCHHHH
Q 017290 246 DECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDG 325 (374)
Q Consensus 246 ~Dva~~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~ 325 (374)
+|++++++.++++..+++||+++++.+++.|+++.+.+..|.+.++...+.+........|++|++++|||.|+++++++
T Consensus 242 ~D~a~ai~~~~~~~~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~d~sk~~~~lgw~p~~~l~e~ 321 (370)
T PLN02695 242 DECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDG 321 (370)
T ss_pred HHHHHHHHHHHhccCCCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCCCCccccccCHHHHHHhcCCCCCCCHHHH
Confidence 99999999998887788999999999999999999999999877766666555556677899999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcCceEEEecCCcccCCCCCcccCccccccCCC
Q 017290 326 LRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGTQAPVQLGSLRAADGKE 374 (374)
Q Consensus 326 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
|+++++|+++......+++.+...|.+++....|.|++++++|++||||
T Consensus 322 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (370)
T PLN02695 322 LRITYFWIKEQIEKEKAEGSDAAAYSSSKVVGTQAPVQLGSLRAADGKE 370 (370)
T ss_pred HHHHHHHHHHHHHhhhccccchhhhcccccccccCceeccccccccCCC
Confidence 9999999999999999999999999999999999999999999999997
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-49 Score=336.67 Aligned_cols=302 Identities=26% Similarity=0.389 Sum_probs=259.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccc-cceeEEecccchhhHhhhcc--CCCEEEEcccccCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMF-CHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMGG 103 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~~ 103 (374)
|+||||||+||||+|.+.+|++.||+|++++.-.......... .++++.+|+.|...+.++++ ++|.|||+|+...
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~- 79 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASIS- 79 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECccccc-
Confidence 6899999999999999999999999999999766543332221 26899999999999999996 8999999999754
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHH
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELC 183 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~ 183 (374)
.+.+-.++..+++.|+.+|.+|+++|++.++++|||.||+.+||..... |++|+. +..|.++||+||++.|+++
T Consensus 80 VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~----PI~E~~--~~~p~NPYG~sKlm~E~iL 153 (329)
T COG1087 80 VGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTS----PISETS--PLAPINPYGRSKLMSEEIL 153 (329)
T ss_pred cchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCc----ccCCCC--CCCCCCcchhHHHHHHHHH
Confidence 3355667888999999999999999999999999999999999987654 689998 7789999999999999999
Q ss_pred HHHHhhhCCcEEEEeeCcccCCCCCC------CCCCCcHHHHHHHHhccCCceEeeCC------CcccccceeHHHHHHH
Q 017290 184 KHYTKDFGIECRVGRFHNIYGPFGTW------KGMEKAPAAFCRKALTSTDKFEMWGD------GLQTRSFTFIDECVEG 251 (374)
Q Consensus 184 ~~~~~~~~~~~~ilR~~~v~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~Dva~~ 251 (374)
+++...+++++++||.+++-|..... .+...+++..++-++-....+.++|+ |...|+|||+.|+|.+
T Consensus 154 ~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~a 233 (329)
T COG1087 154 RDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADA 233 (329)
T ss_pred HHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHH
Confidence 99999999999999999999976431 12345566666666666667888874 5668999999999999
Q ss_pred HHhhhcc---C-CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCC-CcccccchHHHHHhcCCCcCC-CHHHH
Q 017290 252 VLRLTKS---D-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-VRGRNSDNTLIKEKLGWAPSM-KLKDG 325 (374)
Q Consensus 252 i~~~~~~---~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-~~~~~~d~~k~~~~lg~~p~~-~~~~~ 325 (374)
.+++++. . ...+||+++|...|+.|+++.+.++.|++++++..|.... ....+.|++|++++|||+|++ ++++.
T Consensus 234 H~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~RR~GDpa~l~Ad~~kA~~~Lgw~p~~~~L~~i 313 (329)
T COG1087 234 HVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPRRAGDPAILVADSSKARQILGWQPTYDDLEDI 313 (329)
T ss_pred HHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCCCCCCCCceeEeCHHHHHHHhCCCcccCCHHHH
Confidence 9998864 2 3469999999999999999999999999999988886554 556678999999999999998 99999
Q ss_pred HHHHHHHHHH
Q 017290 326 LRITYFWIKE 335 (374)
Q Consensus 326 l~~~~~~~~~ 335 (374)
++...+|..+
T Consensus 314 i~~aw~W~~~ 323 (329)
T COG1087 314 IKDAWDWHQQ 323 (329)
T ss_pred HHHHHHHhhh
Confidence 9999999985
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-46 Score=347.28 Aligned_cols=304 Identities=22% Similarity=0.272 Sum_probs=244.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-----------cccccceeEEecccchhhHhhhccCCCE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-----------EDMFCHEFHLVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~~i~~~~~dl~~~~~~~~~~~~~d~ 93 (374)
.+|+||||||+||||++|+++|+++|++|++++|....... .....+.++.+|+.+.+.+..+++++|+
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~ 93 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDY 93 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCCE
Confidence 45899999999999999999999999999999986532111 0112467899999999999999999999
Q ss_pred EEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchH
Q 017290 94 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 173 (374)
Q Consensus 94 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~ 173 (374)
|||+|+..... ....++...+++|+.++.+++++|++.++++|||+||.++|+..... +..|+. +..|.+.|+
T Consensus 94 ViHlAa~~~~~-~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~----~~~e~~--~~~p~~~Y~ 166 (348)
T PRK15181 94 VLHQAALGSVP-RSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDL----PKIEER--IGRPLSPYA 166 (348)
T ss_pred EEECccccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCC----CCCCCC--CCCCCChhh
Confidence 99999965421 23345566789999999999999999999999999999999864322 345554 557888999
Q ss_pred HhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHH
Q 017290 174 LEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV 252 (374)
Q Consensus 174 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i 252 (374)
.+|..+|.+++.|....+++++++||+++|||++...+ ....++.++...+. ++++.+++++.+.++|+|++|+|+++
T Consensus 167 ~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~-~~~i~~~g~g~~~rd~i~v~D~a~a~ 245 (348)
T PRK15181 167 VTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLK-DEPIYINGDGSTSRDFCYIENVIQAN 245 (348)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHc-CCCcEEeCCCCceEeeEEHHHHHHHH
Confidence 99999999999998888999999999999999865332 23466777776665 56788889999999999999999999
Q ss_pred HhhhccC----CCCcEEecCCCccCHHHHHHHHHHhcCCCC------CcccCC-CCCCCcccccchHHHHHhcCCCcCCC
Q 017290 253 LRLTKSD----FREPVNIGSDEMVSMNEMAEIVLSFEDKKL------PIHHIP-GPEGVRGRNSDNTLIKEKLGWAPSMK 321 (374)
Q Consensus 253 ~~~~~~~----~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~------~~~~~~-~~~~~~~~~~d~~k~~~~lg~~p~~~ 321 (374)
+.++... .+++||+++++.++++|+++.+.+.++... .+...+ .+.......+|.+|++++|||.|+++
T Consensus 246 ~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~P~~s 325 (348)
T PRK15181 246 LLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFD 325 (348)
T ss_pred HHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccccCHHHHHHHhCCCCCCC
Confidence 8877542 468999999999999999999998886321 111111 12223346789999999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 017290 322 LKDGLRITYFWIKEQ 336 (374)
Q Consensus 322 ~~~~l~~~~~~~~~~ 336 (374)
++++|+++++|++.+
T Consensus 326 l~egl~~~~~w~~~~ 340 (348)
T PRK15181 326 IKEGLKQTLKWYIDK 340 (348)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999765
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-46 Score=315.21 Aligned_cols=329 Identities=34% Similarity=0.514 Sum_probs=275.9
Q ss_pred ccccchhhhhccCCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-----cccceeEEecccch
Q 017290 7 TYGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-----MFCHEFHLVDLRVM 81 (374)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~i~~~~~dl~~~ 81 (374)
..+++......++..++.+.++|+||||.||||+||++.|...||+|++++.......... ...++.+.-|+.
T Consensus 8 ~~~~~~~~~~~~~~~~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~-- 85 (350)
T KOG1429|consen 8 ATGAPNNPSRLREQVKPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVV-- 85 (350)
T ss_pred cccCCCCcchhhhcccCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeech--
Confidence 5666777777888899999999999999999999999999999999999997654433322 223455555554
Q ss_pred hhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 82 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
..++..+|.|+|+|++.+..++ ..++...+..|+.++.+++-.|++.+ +||++.||++|||+.... |..|+
T Consensus 86 ---~pl~~evD~IyhLAapasp~~y-~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~h----pq~e~ 156 (350)
T KOG1429|consen 86 ---EPLLKEVDQIYHLAAPASPPHY-KYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVH----PQVET 156 (350)
T ss_pred ---hHHHHHhhhhhhhccCCCCccc-ccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccC----CCccc
Confidence 4477789999999999876544 44667778889999999999999999 599999999999985433 34444
Q ss_pred CC---CCCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 162 DA---WPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 162 ~~---~~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
.+ +|..|.+-|...|..+|.++..|.++.|+++.|.|+.+.|||...+.. ...++.++.+.++ +.++.++|+|.+
T Consensus 157 ywg~vnpigpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~d-grvvsnf~~q~lr-~epltv~g~G~q 234 (350)
T KOG1429|consen 157 YWGNVNPIGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDD-GRVVSNFIAQALR-GEPLTVYGDGKQ 234 (350)
T ss_pred cccccCcCCchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCC-ChhhHHHHHHHhc-CCCeEEEcCCcc
Confidence 43 366778899999999999999999999999999999999999866543 3445555555554 789999999999
Q ss_pred cccceeHHHHHHHHHhhhccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCccc-CCCCCCCcccccchHHHHHhcCCC
Q 017290 239 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHH-IPGPEGVRGRNSDNTLIKEKLGWA 317 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~-~~~~~~~~~~~~d~~k~~~~lg~~ 317 (374)
.++|.|++|++++++++++++..+.+|+++++.+|+.|+++++.++.+....++. .+.+++...+..|++++++.|||.
T Consensus 235 tRSF~yvsD~Vegll~Lm~s~~~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~~Ddp~kR~pDit~ake~LgW~ 314 (350)
T KOG1429|consen 235 TRSFQYVSDLVEGLLRLMESDYRGPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVENGPDDPRKRKPDITKAKEQLGWE 314 (350)
T ss_pred eEEEEeHHHHHHHHHHHhcCCCcCCcccCCccceeHHHHHHHHHHHcCCCcceeecCCCCCCccccCccHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999999976554443 456788899999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHhhhhhhhcCceEE
Q 017290 318 PSMKLKDGLRITYFWIKEQIEKEKTQGIDLS 348 (374)
Q Consensus 318 p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (374)
|+.+|+++|+.++.|+++.+...++++....
T Consensus 315 Pkv~L~egL~~t~~~fr~~i~~~~~~gs~~~ 345 (350)
T KOG1429|consen 315 PKVSLREGLPLTVTYFRERIAREKKKGSSKP 345 (350)
T ss_pred CCCcHHHhhHHHHHHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999999887775543
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-46 Score=316.34 Aligned_cols=306 Identities=25% Similarity=0.354 Sum_probs=264.5
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCc-----cc-ccccccceeEEecccchhhHhhhcc--CCCEEEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNE-----HM-TEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFN 96 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~-----~~-~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~ 96 (374)
|++|||||.||||+.+++.++++. .+|++++.-.-. .. ....+...++.+|+.|.+.+.++++ ++|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 689999999999999999999984 457777754321 11 1123467899999999999999997 7999999
Q ss_pred cccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHh
Q 017290 97 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLE 175 (374)
Q Consensus 97 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~s 175 (374)
+|+-++ .+-+-.++...++.|+.||.+|++++++...+ ||+++||..|||.-... +..++|.+ |.+|.++|.+|
T Consensus 81 fAAESH-VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~--~~~FtE~t--p~~PsSPYSAS 155 (340)
T COG1088 81 FAAESH-VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLD--DDAFTETT--PYNPSSPYSAS 155 (340)
T ss_pred echhcc-ccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCC--CCCcccCC--CCCCCCCcchh
Confidence 999775 45566778889999999999999999999865 99999999999985431 12588888 88999999999
Q ss_pred HHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhh
Q 017290 176 KLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255 (374)
Q Consensus 176 K~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~ 255 (374)
|+....+++.|...+|++++|.|+++-|||..- .+.+++.++.+.+. +.+++++|+|.+.++|+|++|-++++..+
T Consensus 156 KAasD~lVray~~TYglp~~ItrcSNNYGPyqf---pEKlIP~~I~nal~-g~~lpvYGdG~~iRDWl~VeDh~~ai~~V 231 (340)
T COG1088 156 KAASDLLVRAYVRTYGLPATITRCSNNYGPYQF---PEKLIPLMIINALL-GKPLPVYGDGLQIRDWLYVEDHCRAIDLV 231 (340)
T ss_pred hhhHHHHHHHHHHHcCCceEEecCCCCcCCCcC---chhhhHHHHHHHHc-CCCCceecCCcceeeeEEeHhHHHHHHHH
Confidence 999999999999999999999999999999764 46788888888776 78999999999999999999999999999
Q ss_pred hccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCC-----cccCCCC-CCCcccccchHHHHHhcCCCcCCCHHHHHHH
Q 017290 256 TKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLP-----IHHIPGP-EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRI 328 (374)
Q Consensus 256 ~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~-----~~~~~~~-~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~ 328 (374)
+.+. .+++|||+++...+--|+++.|.+.+|++.+ +.++... .-...+.+|.+|+.++|||.|.++++++|++
T Consensus 232 l~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~~fe~Glrk 311 (340)
T COG1088 232 LTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGWRPQETFETGLRK 311 (340)
T ss_pred HhcCcCCceEEeCCCccchHHHHHHHHHHHhCccccchhhheEeccCCCCCccceeechHHHhhhcCCCcCCCHHHHHHH
Confidence 9886 6999999999999999999999999998776 5666543 3356778999999999999999999999999
Q ss_pred HHHHHHHhhhhhh
Q 017290 329 TYFWIKEQIEKEK 341 (374)
Q Consensus 329 ~~~~~~~~~~~~~ 341 (374)
+++||.+....-+
T Consensus 312 Tv~WY~~N~~Ww~ 324 (340)
T COG1088 312 TVDWYLDNEWWWE 324 (340)
T ss_pred HHHHHHhchHHHh
Confidence 9999999776543
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=335.47 Aligned_cols=304 Identities=27% Similarity=0.431 Sum_probs=242.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhccCCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
...||||||||+||||++|++.|+++|++|++++|........ ....++++.+|+.+. .+.++|+|||||
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlA 192 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLA 192 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECc
Confidence 3568999999999999999999999999999999863221110 112456777777553 346899999999
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCC---CCCCCCCchHHh
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDA---WPAEPQDAYGLE 175 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~---~~~~~~~~y~~s 175 (374)
+..... ....++...++.|+.++.+++++|++.++ +|||+||.+||+..... +++|+.+ .+..|.+.|+.+
T Consensus 193 a~~~~~-~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~----p~~E~~~~~~~p~~p~s~Yg~S 266 (436)
T PLN02166 193 CPASPV-HYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEH----PQKETYWGNVNPIGERSCYDEG 266 (436)
T ss_pred eeccch-hhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCC----CCCccccccCCCCCCCCchHHH
Confidence 865321 22345667888999999999999999986 89999999999865322 3455431 145667889999
Q ss_pred HHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhh
Q 017290 176 KLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255 (374)
Q Consensus 176 K~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~ 255 (374)
|..+|++++.|.+..+++++++||+++||++.... ....+..++.+.+. ++++.+++++++.++|+|++|++++++.+
T Consensus 267 K~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~-~~~~i~~~i~~~l~-~~~i~v~g~g~~~rdfi~V~Dva~ai~~~ 344 (436)
T PLN02166 267 KRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLD-DGRVVSNFVAQTIR-KQPMTVYGDGKQTRSFQYVSDLVDGLVAL 344 (436)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCC-ccchHHHHHHHHhc-CCCcEEeCCCCeEEeeEEHHHHHHHHHHH
Confidence 99999999999988899999999999999975311 12355666666665 56777889999999999999999999999
Q ss_pred hccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCC-CCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHH
Q 017290 256 TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP-EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIK 334 (374)
Q Consensus 256 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~ 334 (374)
+++...++||+++++.+++.|+++.+.+.+|.+..+...+.. ........|++|++++|||+|+++++++|+++++|++
T Consensus 345 ~~~~~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~~~~~~~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~ 424 (436)
T PLN02166 345 MEGEHVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNTADDPHKRKPDISKAKELLNWEPKISLREGLPLMVSDFR 424 (436)
T ss_pred HhcCCCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 987777899999999999999999999999987665555432 2345567899999999999999999999999999998
Q ss_pred Hhhhhh
Q 017290 335 EQIEKE 340 (374)
Q Consensus 335 ~~~~~~ 340 (374)
..+...
T Consensus 425 ~~~~~~ 430 (436)
T PLN02166 425 NRILNE 430 (436)
T ss_pred HHhcCc
Confidence 876654
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-43 Score=331.47 Aligned_cols=320 Identities=23% Similarity=0.309 Sum_probs=241.5
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhccCCCEE
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSE-GHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTKGVDHV 94 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~~~d~v 94 (374)
+...|+||||||+||||++|++.|+++ |++|++++|+....... ...+++++.+|+.|.+.+.++++++|+|
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~V 90 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLT 90 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEE
Confidence 446689999999999999999999998 59999999875432111 1125789999999999999999999999
Q ss_pred EEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCccc--ccccCCC---------CCCC
Q 017290 95 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQL--ETNVSLK---------ESDA 163 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~--~~~~~~~---------e~~~ 163 (374)
||||+..... .+..++...+..|+.++.+++++|++.+ ++|||+||.++|+..... +.+.++. |+..
T Consensus 91 iHlAa~~~~~-~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~ 168 (386)
T PLN02427 91 INLAAICTPA-DYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDES 168 (386)
T ss_pred EEcccccChh-hhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCccccccccccccccccccc
Confidence 9999965321 1223444556789999999999999887 799999999999864321 1111211 1110
Q ss_pred C-----CCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCC--------CCCCcHHHHHHHHhccCCce
Q 017290 164 W-----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWK--------GMEKAPAAFCRKALTSTDKF 230 (374)
Q Consensus 164 ~-----~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 230 (374)
. ...|.+.|+.+|..+|++++.++...+++++++||++||||+.... ....++..++...+ .+.++
T Consensus 169 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~ 247 (386)
T PLN02427 169 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL-RREPL 247 (386)
T ss_pred ccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHh-cCCCe
Confidence 0 0134568999999999999999888899999999999999974311 01123333444444 46677
Q ss_pred EeeCCCcccccceeHHHHHHHHHhhhccC---CCCcEEecCC-CccCHHHHHHHHHHhcCCCC--C---c--ccCCC---
Q 017290 231 EMWGDGLQTRSFTFIDECVEGVLRLTKSD---FREPVNIGSD-EMVSMNEMAEIVLSFEDKKL--P---I--HHIPG--- 296 (374)
Q Consensus 231 ~~~~~~~~~~~~i~~~Dva~~i~~~~~~~---~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~--~---~--~~~~~--- 296 (374)
.+++++++.++|+|++|+|++++.+++++ .+++||++++ +.+++.|+++.+.+.+|... + . ...+.
T Consensus 248 ~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 327 (386)
T PLN02427 248 KLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKEF 327 (386)
T ss_pred EEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCcccc
Confidence 78888888999999999999999999875 3579999987 59999999999999987521 0 0 11111
Q ss_pred ----CCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHHHhhhhhhhcCc
Q 017290 297 ----PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGI 345 (374)
Q Consensus 297 ----~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (374)
.......+.|.+|++++|||+|+++++++|+++++|+++.+.....+.+
T Consensus 328 ~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~~~~~~~~~~~ 380 (386)
T PLN02427 328 YGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHKTYAEAIKKAM 380 (386)
T ss_pred cCccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 1123455779999999999999999999999999999998887655543
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=323.45 Aligned_cols=302 Identities=20% Similarity=0.216 Sum_probs=237.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc----c-c-------ccccceeEEecccchhhHhhhcc--CCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM----T-E-------DMFCHEFHLVDLRVMDNCLKVTK--GVD 92 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~-~-------~~~~i~~~~~dl~~~~~~~~~~~--~~d 92 (374)
|+||||||+||||++++++|++.|++|++++|++.... . . ...+++++.+|++|.+.+.++++ ++|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 58999999999999999999999999999998864210 0 0 01247889999999999999987 579
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC---eEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK---RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~---~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
+|||+|+..+.. .....+...+++|+.++.+++++|++.+++ +|||+||.++||..... +++|+. +..|.
T Consensus 81 ~ViH~Aa~~~~~-~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~----~~~E~~--~~~p~ 153 (343)
T TIGR01472 81 EIYNLAAQSHVK-VSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEI----PQNETT--PFYPR 153 (343)
T ss_pred EEEECCcccccc-hhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCC----CCCCCC--CCCCC
Confidence 999999975421 122234456677899999999999998863 89999999999864321 466766 66788
Q ss_pred CchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHH
Q 017290 170 DAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 249 (374)
+.|+.+|..+|.+++.|+.+.++++++.|+.++|||..........+..++.....+.....+++++++.++|+|++|+|
T Consensus 154 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a 233 (343)
T TIGR01472 154 SPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYV 233 (343)
T ss_pred ChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHH
Confidence 99999999999999999988899999999999999864321112233444444444333344568889999999999999
Q ss_pred HHHHhhhccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCccc-------------------CC---CCCCCcccccch
Q 017290 250 EGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHH-------------------IP---GPEGVRGRNSDN 307 (374)
Q Consensus 250 ~~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~-------------------~~---~~~~~~~~~~d~ 307 (374)
++++.+++++.+++||+++++++|+.|+++.+.+.+|.+..... .+ .+........|+
T Consensus 234 ~a~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 313 (343)
T TIGR01472 234 EAMWLMLQQDKPDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDA 313 (343)
T ss_pred HHHHHHHhcCCCccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccchhcCCH
Confidence 99999998776689999999999999999999999997543110 01 122233446799
Q ss_pred HHHHHhcCCCcCCCHHHHHHHHHHHHHH
Q 017290 308 TLIKEKLGWAPSMKLKDGLRITYFWIKE 335 (374)
Q Consensus 308 ~k~~~~lg~~p~~~~~~~l~~~~~~~~~ 335 (374)
+|++++|||+|+++++++|+++++|+++
T Consensus 314 ~k~~~~lgw~p~~~l~egi~~~~~~~~~ 341 (343)
T TIGR01472 314 TKAKEKLGWKPEVSFEKLVKEMVEEDLE 341 (343)
T ss_pred HHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999884
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=323.65 Aligned_cols=310 Identities=17% Similarity=0.239 Sum_probs=241.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCCCCccccc-ccccceeEEeccc-chhhHhhhccCCCEEEEcccccC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSE-GHYIIASDWKKNEHMTE-DMFCHEFHLVDLR-VMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~-~~~~i~~~~~dl~-~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
||+||||||+||||++|++.|+++ ||+|++++|+....... ...+++++.+|+. +.+.+.++++++|+|||+|+...
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~ 80 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIAT 80 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCC
Confidence 578999999999999999999987 79999999865432211 2235788999997 66778788889999999998643
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCC----C-CCCCCchHHhHH
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----P-AEPQDAYGLEKL 177 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~----~-~~~~~~y~~sK~ 177 (374)
.. ....++...+++|+.++.+++++|++.+ ++|||+||..+|+..... ++.|+... + ..|.+.|+.+|.
T Consensus 81 ~~-~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~----~~~ee~~~~~~~~~~~p~~~Y~~sK~ 154 (347)
T PRK11908 81 PA-TYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDE----EFDPEASPLVYGPINKPRWIYACSKQ 154 (347)
T ss_pred hH-HhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCc----CcCccccccccCcCCCccchHHHHHH
Confidence 21 2344666778999999999999999988 699999999999864321 34444311 1 245678999999
Q ss_pred HHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCC-----CCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHH
Q 017290 178 ASEELCKHYTKDFGIECRVGRFHNIYGPFGTWK-----GMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV 252 (374)
Q Consensus 178 ~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i 252 (374)
.+|+.++.++...+++++++||+.+|||+.... .....+..++..++. +.++.+++++++.++|+|++|+++++
T Consensus 155 ~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~g~~~r~~i~v~D~a~a~ 233 (347)
T PRK11908 155 LMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVR-GEPISLVDGGSQKRAFTDIDDGIDAL 233 (347)
T ss_pred HHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhC-CCceEEecCCceeeccccHHHHHHHH
Confidence 999999999988899999999999999975321 123345566666554 56677878888999999999999999
Q ss_pred HhhhccC----CCCcEEecCC-CccCHHHHHHHHHHhcCCCCCc---------ccCCCC-------CCCcccccchHHHH
Q 017290 253 LRLTKSD----FREPVNIGSD-EMVSMNEMAEIVLSFEDKKLPI---------HHIPGP-------EGVRGRNSDNTLIK 311 (374)
Q Consensus 253 ~~~~~~~----~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~---------~~~~~~-------~~~~~~~~d~~k~~ 311 (374)
+.+++++ .+++||++++ ..+|+.|+++.+.+.++....+ ...+.. ........|.+|++
T Consensus 234 ~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~ 313 (347)
T PRK11908 234 MKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKIDNTM 313 (347)
T ss_pred HHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhccccCChHHHH
Confidence 9999875 2689999987 5899999999999988853222 111111 12234456889999
Q ss_pred HhcCCCcCCCHHHHHHHHHHHHHHhhhhhhh
Q 017290 312 EKLGWAPSMKLKDGLRITYFWIKEQIEKEKT 342 (374)
Q Consensus 312 ~~lg~~p~~~~~~~l~~~~~~~~~~~~~~~~ 342 (374)
++|||+|.++++++++++++|++++..+.++
T Consensus 314 ~~lGw~p~~~l~~~l~~~~~~~~~~~~~~~~ 344 (347)
T PRK11908 314 QELGWAPKTTMDDALRRIFEAYRGHVAEARA 344 (347)
T ss_pred HHcCCCCCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999988777653
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-42 Score=328.03 Aligned_cols=301 Identities=28% Similarity=0.423 Sum_probs=239.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-----cccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-----EDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
..||||||||+||||++|+++|+++|++|++++|....... ....+++++.+|+.+. ++.++|+|||||+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHlAa 192 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHLAC 192 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEeee
Confidence 56899999999999999999999999999999875321111 1123467777887653 3458999999998
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCC---CCCCCCCchHHhH
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDA---WPAEPQDAYGLEK 176 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~---~~~~~~~~y~~sK 176 (374)
..... .+..++...++.|+.++.+|+++|++.++ +|||+||.++|+..... +..|+.+ .+..+.+.|+.+|
T Consensus 193 ~~~~~-~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~----p~~E~~~~~~~P~~~~s~Y~~SK 266 (442)
T PLN02206 193 PASPV-HYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQH----PQVETYWGNVNPIGVRSCYDEGK 266 (442)
T ss_pred ecchh-hhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCC----CCCccccccCCCCCccchHHHHH
Confidence 65421 23345677889999999999999999996 89999999999864322 3444421 1445578899999
Q ss_pred HHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhh
Q 017290 177 LASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 256 (374)
Q Consensus 177 ~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~ 256 (374)
..+|+++..|.+..+++++++||+++|||+.... ....+..++...+. ++++.+++++++.++|+|++|+|++++.++
T Consensus 267 ~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~-~~~~v~~~i~~~l~-~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~ 344 (442)
T PLN02206 267 RTAETLTMDYHRGANVEVRIARIFNTYGPRMCID-DGRVVSNFVAQALR-KEPLTVYGDGKQTRSFQFVSDLVEGLMRLM 344 (442)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-ccchHHHHHHHHHc-CCCcEEeCCCCEEEeEEeHHHHHHHHHHHH
Confidence 9999999999888899999999999999974311 12345566666554 567788899999999999999999999999
Q ss_pred ccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCC-CCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHHH
Q 017290 257 KSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP-EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKE 335 (374)
Q Consensus 257 ~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~ 335 (374)
++..+++||+++++.+++.|+++.+.+.++.+..+...+.. ........|++|+++++||+|+++++++|+++++|+++
T Consensus 345 e~~~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~~~~~~~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~~ 424 (442)
T PLN02206 345 EGEHVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQ 424 (442)
T ss_pred hcCCCceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHH
Confidence 87777899999999999999999999999876655544432 23455678999999999999999999999999999987
Q ss_pred hhh
Q 017290 336 QIE 338 (374)
Q Consensus 336 ~~~ 338 (374)
.+-
T Consensus 425 ~~~ 427 (442)
T PLN02206 425 RVF 427 (442)
T ss_pred hhh
Confidence 653
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-42 Score=327.19 Aligned_cols=326 Identities=19% Similarity=0.176 Sum_probs=243.4
Q ss_pred cccchhhhhccCCCCC--CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc--------------------
Q 017290 8 YGAYTYEELEREPYWP--SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------------------- 65 (374)
Q Consensus 8 ~~~~~~~~~~~~~~~~--~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------------- 65 (374)
.++-+--.++.++..+ .++|+||||||+||||++|+++|+++|++|+++++.......
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 106 (442)
T PLN02572 27 TPAVTELATPSAPGSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRR 106 (442)
T ss_pred ccceecccCCCCCCCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHH
Confidence 3333333455555433 367899999999999999999999999999998753211100
Q ss_pred ---cccccceeEEecccchhhHhhhcc--CCCEEEEcccccCCcccccCC---cceehhhhHHHHHHHHHHHHhCCCC-e
Q 017290 66 ---EDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNMLEASRISGVK-R 136 (374)
Q Consensus 66 ---~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~~~~~~~~~---~~~~~~~n~~~~~~ll~a~~~~~~~-~ 136 (374)
....+++++.+|+.|.+.+.++++ ++|+|||+|+.... .....+ ....+++|+.++.+++++|++.+++ +
T Consensus 107 ~~~~~~~~v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~-~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~ 185 (442)
T PLN02572 107 WKEVSGKEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSA-PYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCH 185 (442)
T ss_pred HHHhhCCcceEEECCCCCHHHHHHHHHhCCCCEEEECCCcccC-hhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 001247889999999999999887 58999999976432 122222 2345678999999999999999986 9
Q ss_pred EEEeecccccCCCcccccc-cCCC------CCC-CCCCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCC
Q 017290 137 FFYASSACIYPEFKQLETN-VSLK------ESD-AWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGT 208 (374)
Q Consensus 137 ~i~~Ss~~vy~~~~~~~~~-~~~~------e~~-~~~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~ 208 (374)
||++||..+||.... +.. ..++ |++ +.+..|.+.|+.+|..+|.+++.|+..++++++++||+++|||+..
T Consensus 186 ~V~~SS~~vYG~~~~-~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~ 264 (442)
T PLN02572 186 LVKLGTMGEYGTPNI-DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTD 264 (442)
T ss_pred EEEEecceecCCCCC-CCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCc
Confidence 999999999986421 111 1121 222 1255678899999999999999999989999999999999999754
Q ss_pred CCC--------------CCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC--CC--CcEEecCCC
Q 017290 209 WKG--------------MEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FR--EPVNIGSDE 270 (374)
Q Consensus 209 ~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~--~~--~~~~i~~~~ 270 (374)
... ....+..++...+. ++++.+++++++.++|+|++|+|++++.++++. .+ .+||+++ .
T Consensus 265 ~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~-g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~ 342 (442)
T PLN02572 265 ETMMDEELINRLDYDGVFGTALNRFCVQAAV-GHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-E 342 (442)
T ss_pred ccccccccccccCcccchhhHHHHHHHHHhc-CCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-C
Confidence 210 01344455555554 567888899999999999999999999999865 23 4799986 7
Q ss_pred ccCHHHHHHHHHHh---cCCCCCcccCCCCCC---CcccccchHHHHHhcCCCcCC---CHHHHHHHHHHHHHHhhh
Q 017290 271 MVSMNEMAEIVLSF---EDKKLPIHHIPGPEG---VRGRNSDNTLIKEKLGWAPSM---KLKDGLRITYFWIKEQIE 338 (374)
Q Consensus 271 ~~s~~e~~~~i~~~---~g~~~~~~~~~~~~~---~~~~~~d~~k~~~~lg~~p~~---~~~~~l~~~~~~~~~~~~ 338 (374)
.+++.|+++.+.+. +|.+..+...+.+.. ......|.+|++. |||+|++ +++++|.++++||+.+..
T Consensus 343 ~~si~el~~~i~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~-LGw~p~~~~~~l~~~l~~~~~~~~~~~~ 418 (442)
T PLN02572 343 QFSVNELAKLVTKAGEKLGLDVEVISVPNPRVEAEEHYYNAKHTKLCE-LGLEPHLLSDSLLDSLLNFAVKYKDRVD 418 (442)
T ss_pred ceeHHHHHHHHHHHHHhhCCCCCeeeCCCCcccccccccCccHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHhhcc
Confidence 89999999999999 887766555543322 2345678999975 9999998 899999999999985443
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-42 Score=319.15 Aligned_cols=304 Identities=22% Similarity=0.346 Sum_probs=238.8
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEE-EeCCCCccc-----c-cccccceeEEecccchhhHhhhcc--CCCEEEE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIA-SDWKKNEHM-----T-EDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFN 96 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~-----~-~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~ 96 (374)
||+|||||||||||+++++.|+++|++|++ +++...... . .....+.++.+|+.|.+.+.++++ ++|+|||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 579999999999999999999999987554 444322110 0 011246788999999999999887 5999999
Q ss_pred cccccCCcccccCCcceehhhhHHHHHHHHHHHHh---------CCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 97 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRI---------SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 97 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~---------~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
||+.... .....++...+++|+.++.+++++|.+ .++++||++||.++|+.... ...+++|+. +..
T Consensus 81 ~A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~--~~~~~~E~~--~~~ 155 (355)
T PRK10217 81 LAAESHV-DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHS--TDDFFTETT--PYA 155 (355)
T ss_pred CCcccCc-chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCC--CCCCcCCCC--CCC
Confidence 9996532 112234567889999999999999986 34679999999999986422 112467766 567
Q ss_pred CCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHH
Q 017290 168 PQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 247 (374)
|.+.|+.+|..+|.+++.++++.+++++++||+++|||+.. ....+..++..... +.++.+++++++.++|+|++|
T Consensus 156 p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~---~~~~~~~~~~~~~~-~~~~~~~g~g~~~~~~i~v~D 231 (355)
T PRK10217 156 PSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHF---PEKLIPLMILNALA-GKPLPVYGNGQQIRDWLYVED 231 (355)
T ss_pred CCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCC---cccHHHHHHHHHhc-CCCceEeCCCCeeeCcCcHHH
Confidence 88999999999999999999888999999999999999753 23455666666554 566778899999999999999
Q ss_pred HHHHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCCc------------ccCC-CCCCCcccccchHHHHHh
Q 017290 248 CVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPI------------HHIP-GPEGVRGRNSDNTLIKEK 313 (374)
Q Consensus 248 va~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~------------~~~~-~~~~~~~~~~d~~k~~~~ 313 (374)
+|++++.+++.. .+++||+++++.+++.|+++.+.+.++...+. ...+ .+.......+|++|++++
T Consensus 232 ~a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 311 (355)
T PRK10217 232 HARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIARE 311 (355)
T ss_pred HHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHHHHh
Confidence 999999998876 46899999999999999999999988753211 1111 122234457899999999
Q ss_pred cCCCcCCCHHHHHHHHHHHHHHhhh
Q 017290 314 LGWAPSMKLKDGLRITYFWIKEQIE 338 (374)
Q Consensus 314 lg~~p~~~~~~~l~~~~~~~~~~~~ 338 (374)
|||.|.++++++|+++++|++....
T Consensus 312 lg~~p~~~l~e~l~~~~~~~~~~~~ 336 (355)
T PRK10217 312 LGWLPQETFESGMRKTVQWYLANES 336 (355)
T ss_pred cCCCCcCcHHHHHHHHHHHHHhCHH
Confidence 9999999999999999999998754
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=316.36 Aligned_cols=305 Identities=17% Similarity=0.207 Sum_probs=239.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc--cc---------ccccceeEEecccchhhHhhhcc--CC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM--TE---------DMFCHEFHLVDLRVMDNCLKVTK--GV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~---------~~~~i~~~~~dl~~~~~~~~~~~--~~ 91 (374)
.+|+||||||+||||++++++|+++|++|++++|.+.... .. ....++++.+|+.|.+.+..+++ ++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 84 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP 84 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999998754211 00 01246788999999999988887 57
Q ss_pred CEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-----eEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-----RFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-----~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
|+|||||+..+. .....++...+++|+.++.+++++|++.+++ +|||+||.++|+.... +++|+. +.
T Consensus 85 d~Vih~A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-----~~~E~~--~~ 156 (340)
T PLN02653 85 DEVYNLAAQSHV-AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-----PQSETT--PF 156 (340)
T ss_pred CEEEECCcccch-hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-----CCCCCC--CC
Confidence 999999997532 1222345566788999999999999998875 8999999999997542 467776 66
Q ss_pred CCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceE-eeCCCcccccceeH
Q 017290 167 EPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFE-MWGDGLQTRSFTFI 245 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~ 245 (374)
.|.+.|+.+|..+|.+++.++.+++++++..|+.++|||..........+..++..... +.... +++++++.++|+|+
T Consensus 157 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~g~~~rd~i~v 235 (340)
T PLN02653 157 HPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKV-GLQKKLFLGNLDASRDWGFA 235 (340)
T ss_pred CCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHc-CCCCceEeCCCcceecceeH
Confidence 78899999999999999999988899999999999999864321111222233333333 44443 44888999999999
Q ss_pred HHHHHHHHhhhccCCCCcEEecCCCccCHHHHHHHHHHhcCCCC--CcccCC---CCCCCcccccchHHHHHhcCCCcCC
Q 017290 246 DECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKL--PIHHIP---GPEGVRGRNSDNTLIKEKLGWAPSM 320 (374)
Q Consensus 246 ~Dva~~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~--~~~~~~---~~~~~~~~~~d~~k~~~~lg~~p~~ 320 (374)
+|+|++++.++++..++.||+++++++++.|+++.+.+.+|.+. .+...+ .+........|++|++++|||.|++
T Consensus 236 ~D~a~a~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~ 315 (340)
T PLN02653 236 GDYVEAMWLMLQQEKPDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYFRPAEVDNLKGDASKAREVLGWKPKV 315 (340)
T ss_pred HHHHHHHHHHHhcCCCCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccCCccccccccCCHHHHHHHhCCCCCC
Confidence 99999999999887678999999999999999999999998642 111112 1233445567999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhh
Q 017290 321 KLKDGLRITYFWIKEQIE 338 (374)
Q Consensus 321 ~~~~~l~~~~~~~~~~~~ 338 (374)
+++++|+++++|+++...
T Consensus 316 ~l~~gi~~~~~~~~~~~~ 333 (340)
T PLN02653 316 GFEQLVKMMVDEDLELAK 333 (340)
T ss_pred CHHHHHHHHHHHHHHhcC
Confidence 999999999999986554
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=339.76 Aligned_cols=309 Identities=18% Similarity=0.242 Sum_probs=241.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCCCCccccc-ccccceeEEecccchhh-HhhhccCCCEEEEccccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSE-GHYIIASDWKKNEHMTE-DMFCHEFHLVDLRVMDN-CLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~-~~~~i~~~~~dl~~~~~-~~~~~~~~d~vi~~a~~~ 101 (374)
.+|+||||||+||||++|+++|+++ ||+|++++|.+...... ...+++++.+|+.|.+. +.++++++|+|||+|+..
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~~ 393 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIA 393 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECcccc
Confidence 5689999999999999999999986 79999999976532211 12357889999998655 567788999999999975
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCC----CC-CCCCchHHhH
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PA-EPQDAYGLEK 176 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~----~~-~~~~~y~~sK 176 (374)
... .+..++...+++|+.++.+++++|++.+ ++|||+||.++|+.... .+++|+.+. +. .|.+.|+.+|
T Consensus 394 ~~~-~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~----~~~~E~~~~~~~~p~~~p~s~Yg~sK 467 (660)
T PRK08125 394 TPI-EYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTD----KYFDEDTSNLIVGPINKQRWIYSVSK 467 (660)
T ss_pred Cch-hhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCC----CCcCccccccccCCCCCCccchHHHH
Confidence 422 2233456678899999999999999998 79999999999986432 146666531 21 3567899999
Q ss_pred HHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCC-----CCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHH
Q 017290 177 LASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG-----MEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG 251 (374)
Q Consensus 177 ~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 251 (374)
..+|.+++.|++.++++++++||+++|||+..... ....+..++..... +.++.+++++.+.++|+|++|+|++
T Consensus 468 ~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~-~~~i~~~g~g~~~rd~i~v~Dva~a 546 (660)
T PRK08125 468 QLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE-GSPIKLVDGGKQKRCFTDIRDGIEA 546 (660)
T ss_pred HHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcC-CCCeEEeCCCceeeceeeHHHHHHH
Confidence 99999999999888999999999999999753211 12345666666554 5677788889999999999999999
Q ss_pred HHhhhccC----CCCcEEecCCC-ccCHHHHHHHHHHhcCCCCCcccCCCC----------------CCCcccccchHHH
Q 017290 252 VLRLTKSD----FREPVNIGSDE-MVSMNEMAEIVLSFEDKKLPIHHIPGP----------------EGVRGRNSDNTLI 310 (374)
Q Consensus 252 i~~~~~~~----~~~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~----------------~~~~~~~~d~~k~ 310 (374)
++.++++. .+++||+++++ .++++|+++.+.+.+|.+.....++.. ........|++|+
T Consensus 547 ~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka 626 (660)
T PRK08125 547 LFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNA 626 (660)
T ss_pred HHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccccccccccccccccccccCCChHHH
Confidence 99999874 25789999985 799999999999999853211112111 1223445799999
Q ss_pred HHhcCCCcCCCHHHHHHHHHHHHHHhhhhh
Q 017290 311 KEKLGWAPSMKLKDGLRITYFWIKEQIEKE 340 (374)
Q Consensus 311 ~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~ 340 (374)
+++|||.|.++++++|+++++|+++..+..
T Consensus 627 ~~~LGw~P~~~lee~l~~~i~~~~~~~~~~ 656 (660)
T PRK08125 627 RRLLDWEPKIDMQETIDETLDFFLRTVDLT 656 (660)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999999876654
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=307.26 Aligned_cols=305 Identities=22% Similarity=0.338 Sum_probs=237.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCE-EEEEeCCCCcc--ccc----ccccceeEEecccchhhHhhhcc--CCCEEEEc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEH--MTE----DMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNL 97 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~--~~~----~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~ 97 (374)
|+||||||+||||+++++.|+++|++ |+++++..... ... ....++++.+|++|.+.+.++++ ++|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 58999999999999999999999975 56566533110 000 11245778999999999999886 58999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhC---------CCCeEEEeecccccCCCcccc-----cc-cCCCCCC
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRIS---------GVKRFFYASSACIYPEFKQLE-----TN-VSLKESD 162 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~---------~~~~~i~~Ss~~vy~~~~~~~-----~~-~~~~e~~ 162 (374)
|+.... .....+++..+++|+.++.+++++|++. ++++||++||.++|+...... .+ .+++|+.
T Consensus 81 A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~ 159 (352)
T PRK10084 81 AAESHV-DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT 159 (352)
T ss_pred CcccCC-cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence 996532 1222356778999999999999999874 466999999999998632100 01 1356766
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (374)
+..|.+.|+.+|..+|.+++.+++.++++++++|++.+|||+.. ...++..++..... +..+.+++++++.+++
T Consensus 160 --~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~---~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~ 233 (352)
T PRK10084 160 --AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHF---PEKLIPLVILNALE-GKPLPIYGKGDQIRDW 233 (352)
T ss_pred --CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcC---ccchHHHHHHHHhc-CCCeEEeCCCCeEEee
Confidence 66788999999999999999998888999999999999999753 23456666666554 5567788889999999
Q ss_pred eeHHHHHHHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcc--------cCC-CCCCCcccccchHHHHH
Q 017290 243 TFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIH--------HIP-GPEGVRGRNSDNTLIKE 312 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~--------~~~-~~~~~~~~~~d~~k~~~ 312 (374)
+|++|+|++++.+++++ .+++||+++++.+++.|+++.+.+.++...+.. ..+ .+.......+|++|+++
T Consensus 234 v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~ 313 (352)
T PRK10084 234 LYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDASKISR 313 (352)
T ss_pred EEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhccccccCCCCCceeeeCHHHHHH
Confidence 99999999999988875 478999999999999999999999887532210 011 11222345689999999
Q ss_pred hcCCCcCCCHHHHHHHHHHHHHHhhh
Q 017290 313 KLGWAPSMKLKDGLRITYFWIKEQIE 338 (374)
Q Consensus 313 ~lg~~p~~~~~~~l~~~~~~~~~~~~ 338 (374)
++||.|.++++++|+++++|++++.+
T Consensus 314 ~lg~~p~~~l~~~l~~~~~~~~~~~~ 339 (352)
T PRK10084 314 ELGWKPQETFESGIRKTVEWYLANTE 339 (352)
T ss_pred HcCCCCcCCHHHHHHHHHHHHHhCHH
Confidence 99999999999999999999998644
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-40 Score=305.77 Aligned_cols=307 Identities=22% Similarity=0.226 Sum_probs=239.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc--CCCEEEEc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNL 97 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~ 97 (374)
++|+||||||+||||+++++.|+++|++|++++|+....... ....+.++.+|+.+.+.+.++++ ++|+|||+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 358999999999999999999999999999999876542211 11245678999999999998887 57999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhH
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEK 176 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK 176 (374)
|+.... .....++...+++|+.++.++++++++.+ ++++||+||..+|+.... ..+++|+. +..|.+.|+.+|
T Consensus 83 A~~~~~-~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~---~~~~~e~~--~~~p~~~Y~~sK 156 (349)
T TIGR02622 83 AAQPLV-RKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEW---VWGYRETD--PLGGHDPYSSSK 156 (349)
T ss_pred Cccccc-ccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCC---CCCCccCC--CCCCCCcchhHH
Confidence 995432 23334566788999999999999999877 789999999999986421 11456665 557889999999
Q ss_pred HHHHHHHHHHHhhh-------CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHH
Q 017290 177 LASEELCKHYTKDF-------GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249 (374)
Q Consensus 177 ~~~E~~~~~~~~~~-------~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 249 (374)
..+|.+++.++.+. +++++++||+.+|||++.. ...+++.++..... ++.+.+ +++.+.++|+|++|+|
T Consensus 157 ~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~--~~~~~~~~~~~~~~-g~~~~~-~~g~~~rd~i~v~D~a 232 (349)
T TIGR02622 157 ACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWA--EDRLIPDVIRAFSS-NKIVII-RNPDATRPWQHVLEPL 232 (349)
T ss_pred HHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcch--hhhhhHHHHHHHhc-CCCeEE-CCCCcccceeeHHHHH
Confidence 99999999987654 8999999999999996421 13455666666554 566665 6788999999999999
Q ss_pred HHHHhhhcc------CCCCcEEecCC--CccCHHHHHHHHHHhcC-CCCCcccCCC---CCCCcccccchHHHHHhcCCC
Q 017290 250 EGVLRLTKS------DFREPVNIGSD--EMVSMNEMAEIVLSFED-KKLPIHHIPG---PEGVRGRNSDNTLIKEKLGWA 317 (374)
Q Consensus 250 ~~i~~~~~~------~~~~~~~i~~~--~~~s~~e~~~~i~~~~g-~~~~~~~~~~---~~~~~~~~~d~~k~~~~lg~~ 317 (374)
++++.++++ ..+++||++++ ++++..|+++.+.+.++ .+..+...+. +........|++|++++|||.
T Consensus 233 ~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~ 312 (349)
T TIGR02622 233 SGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLNHPHEARLLKLDSSKARTLLGWH 312 (349)
T ss_pred HHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCCCCCcccceeecCHHHHHHHhCCC
Confidence 999988764 13579999974 79999999999988664 3333322111 122344568999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHhhhhhh
Q 017290 318 PSMKLKDGLRITYFWIKEQIEKEK 341 (374)
Q Consensus 318 p~~~~~~~l~~~~~~~~~~~~~~~ 341 (374)
|+++++++|+++++|+++......
T Consensus 313 p~~~l~~gi~~~i~w~~~~~~~~~ 336 (349)
T TIGR02622 313 PRWGLEEAVSRTVDWYKAWLRGED 336 (349)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999987755443
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-40 Score=305.75 Aligned_cols=309 Identities=22% Similarity=0.305 Sum_probs=240.1
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc----------cccccceeEEecccchhhHhhhcc--C
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT----------EDMFCHEFHLVDLRVMDNCLKVTK--G 90 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------~~~~~i~~~~~dl~~~~~~~~~~~--~ 90 (374)
.+++++||||||+||||+++++.|+++|++|++++|....... ....+++++.+|+.+.+.+..+++ +
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~ 81 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR 81 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence 4456899999999999999999999999999999875432110 011246789999999999988876 7
Q ss_pred CCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~ 170 (374)
+|+|||+|+.... .....++...+..|+.++.+++++|++.++++|||+||.++|+.... .+++|+. +..|.+
T Consensus 82 ~d~vih~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~----~~~~E~~--~~~~~~ 154 (352)
T PLN02240 82 FDAVIHFAGLKAV-GESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEE----VPCTEEF--PLSATN 154 (352)
T ss_pred CCEEEEccccCCc-cccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCC----CCCCCCC--CCCCCC
Confidence 9999999986431 12223456678999999999999999999999999999999985432 2577776 667889
Q ss_pred chHHhHHHHHHHHHHHHhh-hCCcEEEEeeCcccCCCCCCC------CCCCcHHHHHHHHhccC-CceEeeC------CC
Q 017290 171 AYGLEKLASEELCKHYTKD-FGIECRVGRFHNIYGPFGTWK------GMEKAPAAFCRKALTST-DKFEMWG------DG 236 (374)
Q Consensus 171 ~y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~v~g~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~------~~ 236 (374)
.|+.+|..+|.+++.+... .+++++++|++++||++.... .....+..++.....+. ..+.+++ ++
T Consensus 155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 234 (352)
T PLN02240 155 PYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDG 234 (352)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCC
Confidence 9999999999999998754 578999999999999753210 01112233444443322 3455655 57
Q ss_pred cccccceeHHHHHHHHHhhhccC------CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCC-CCcccccchHH
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD------FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE-GVRGRNSDNTL 309 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~------~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~d~~k 309 (374)
.+.++|+|++|+|++++.++++. .+++||+++++.+|++|+++.+.+.+|.+.++...+... .......|++|
T Consensus 235 ~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k 314 (352)
T PLN02240 235 TGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPRRPGDAEEVYASTEK 314 (352)
T ss_pred CEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCCCCCCChhhhhcCHHH
Confidence 88899999999999998887532 257999999999999999999999999877766554322 23344579999
Q ss_pred HHHhcCCCcCCCHHHHHHHHHHHHHHhhh
Q 017290 310 IKEKLGWAPSMKLKDGLRITYFWIKEQIE 338 (374)
Q Consensus 310 ~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 338 (374)
++++|||.|+++++++|+++++|++++..
T Consensus 315 ~~~~lg~~p~~~l~~~l~~~~~~~~~~~~ 343 (352)
T PLN02240 315 AEKELGWKAKYGIDEMCRDQWNWASKNPY 343 (352)
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHhCcc
Confidence 99999999999999999999999998653
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-40 Score=304.36 Aligned_cols=306 Identities=17% Similarity=0.174 Sum_probs=224.7
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc------cc-cccceeEEecccchhhHhhhccCCCEE
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT------ED-MFCHEFHLVDLRVMDNCLKVTKGVDHV 94 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~-~~~i~~~~~dl~~~~~~~~~~~~~d~v 94 (374)
.|.++|+||||||+||||++|+++|+++|++|+++.|+...... .. ...++++.+|++|.+.+.++++++|+|
T Consensus 5 ~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 84 (338)
T PLN00198 5 TPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLV 84 (338)
T ss_pred cCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEE
Confidence 35567999999999999999999999999999999887643211 11 114678899999999999999999999
Q ss_pred EEcccccCCcccccCCc-ceehhhhHHHHHHHHHHHHhC-CCCeEEEeecccccCCCcccccccCCCCCCCC-------C
Q 017290 95 FNLAADMGGMGFIQSNH-SVIMYNNTMISFNMLEASRIS-GVKRFFYASSACIYPEFKQLETNVSLKESDAW-------P 165 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~-~~~~~~n~~~~~~ll~a~~~~-~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~-------~ 165 (374)
||+|+... ....++ ...+++|+.++.++++++.+. ++++|||+||.++|+.......+.+++|+.+. +
T Consensus 85 ih~A~~~~---~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~ 161 (338)
T PLN00198 85 FHVATPVN---FASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSE 161 (338)
T ss_pred EEeCCCCc---cCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhc
Confidence 99998642 222222 345688999999999999886 58899999999999853210011133443210 2
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeC-CCc----ccc
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWG-DGL----QTR 240 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~ 240 (374)
..|.+.|+.+|..+|.+++.|++.++++++++||+++|||+.... ....+ .++...+. +..+.+.+ .+. ..+
T Consensus 162 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~-~~~~~-~~~~~~~~-~~~~~~~g~~~~~~~~~~~ 238 (338)
T PLN00198 162 KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSD-IPSSL-SLAMSLIT-GNEFLINGLKGMQMLSGSI 238 (338)
T ss_pred CCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCC-CCCcH-HHHHHHHc-CCccccccccccccccCCc
Confidence 346788999999999999999988899999999999999975321 11222 22333333 44444444 222 247
Q ss_pred cceeHHHHHHHHHhhhccCC-CCcEEecCCCccCHHHHHHHHHHhcCC-CCCcccCCCCCCCcccccchHHHHHhcCCCc
Q 017290 241 SFTFIDECVEGVLRLTKSDF-REPVNIGSDEMVSMNEMAEIVLSFEDK-KLPIHHIPGPEGVRGRNSDNTLIKEKLGWAP 318 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p 318 (374)
+|+|++|+|++++.+++.+. ++.|+ +++..+++.|+++.+.+.++. +.+....+.+ .......|++|+++ +||+|
T Consensus 239 ~~i~V~D~a~a~~~~~~~~~~~~~~~-~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~k~~~-~G~~p 315 (338)
T PLN00198 239 SITHVEDVCRAHIFLAEKESASGRYI-CCAANTSVPELAKFLIKRYPQYQVPTDFGDFP-SKAKLIISSEKLIS-EGFSF 315 (338)
T ss_pred ceeEHHHHHHHHHHHhhCcCcCCcEE-EecCCCCHHHHHHHHHHHCCCCCCCccccccC-CCCccccChHHHHh-CCcee
Confidence 99999999999999998763 56774 556789999999999988753 2322221111 12345689999987 59999
Q ss_pred CCCHHHHHHHHHHHHHHh
Q 017290 319 SMKLKDGLRITYFWIKEQ 336 (374)
Q Consensus 319 ~~~~~~~l~~~~~~~~~~ 336 (374)
+++++++|+++++|++++
T Consensus 316 ~~~l~~gi~~~~~~~~~~ 333 (338)
T PLN00198 316 EYGIEEIYDQTVEYFKAK 333 (338)
T ss_pred cCcHHHHHHHHHHHHHHc
Confidence 999999999999998863
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-40 Score=300.20 Aligned_cols=291 Identities=27% Similarity=0.474 Sum_probs=228.7
Q ss_pred EEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccCCcccc
Q 017290 30 SVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMGGMGFI 107 (374)
Q Consensus 30 lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~~~~~~ 107 (374)
|||||+||||++|++.|++.|++|+++.+. ..+|+.+.+.+..+++ ++|+|||||+........
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~ 66 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHAN 66 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccchh
Confidence 699999999999999999999988766432 1478999999988876 689999999975422223
Q ss_pred cCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCC--CCCCCC-chHHhHHHHHHHHH
Q 017290 108 QSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW--PAEPQD-AYGLEKLASEELCK 184 (374)
Q Consensus 108 ~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~--~~~~~~-~y~~sK~~~E~~~~ 184 (374)
..++...++.|+.++.+++++|++.+++++||+||..||+.... .+++|++.. +..|.+ .|+.+|..+|++++
T Consensus 67 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~----~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~ 142 (306)
T PLN02725 67 MTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAP----QPIPETALLTGPPEPTNEWYAIAKIAGIKMCQ 142 (306)
T ss_pred hhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCC----CCCCHHHhccCCCCCCcchHHHHHHHHHHHHH
Confidence 34566778899999999999999999999999999999986432 256666421 233443 59999999999999
Q ss_pred HHHhhhCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHH---hccCCceEe-eCCCcccccceeHHHHHHHHHhhhccC
Q 017290 185 HYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKA---LTSTDKFEM-WGDGLQTRSFTFIDECVEGVLRLTKSD 259 (374)
Q Consensus 185 ~~~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~i~~~Dva~~i~~~~~~~ 259 (374)
.+.+..+++++++||+.+||++..... ....+..++..+ ...+.++.+ ++++.+.++++|++|++++++.++++.
T Consensus 143 ~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~ 222 (306)
T PLN02725 143 AYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRY 222 (306)
T ss_pred HHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhcc
Confidence 998888999999999999999754321 123334444322 233455554 688888999999999999999999875
Q ss_pred -CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCC-CCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHHHhh
Q 017290 260 -FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQI 337 (374)
Q Consensus 260 -~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 337 (374)
..+.||+++++.+++.|+++.+.+.++.+..+...+. +.......+|++|++ .+||.|+++++++|+++++|+++++
T Consensus 223 ~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lg~~p~~~~~~~l~~~~~~~~~~~ 301 (306)
T PLN02725 223 SGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDTSKPDGTPRKLMDSSKLR-SLGWDPKFSLKDGLQETYKWYLENY 301 (306)
T ss_pred ccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeecCCCCCcccccccCHHHHH-HhCCCCCCCHHHHHHHHHHHHHhhh
Confidence 4678999999999999999999999987655443332 222345678999997 5999999999999999999999877
Q ss_pred hh
Q 017290 338 EK 339 (374)
Q Consensus 338 ~~ 339 (374)
+.
T Consensus 302 ~~ 303 (306)
T PLN02725 302 ET 303 (306)
T ss_pred hc
Confidence 65
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=297.17 Aligned_cols=306 Identities=32% Similarity=0.450 Sum_probs=245.1
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCC-CEEEEcccccCCcc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGV-DHVFNLAADMGGMG 105 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~-d~vi~~a~~~~~~~ 105 (374)
|+||||||+||||++|++.|+++||+|++++|......... .++.++.+|+++.+......+.+ |+|||+|+......
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~ 79 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPD 79 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-cccceeeecccchHHHHHHHhcCCCEEEEccccCchhh
Confidence 45999999999999999999999999999999876544433 56788999999988888888877 99999999875322
Q ss_pred cccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHH
Q 017290 106 FIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKH 185 (374)
Q Consensus 106 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~ 185 (374)
....++...+..|+.++.+++++|++.+++++||.||.++|+... .+.+++|+. .+..|.+.|+.+|..+|..+..
T Consensus 80 ~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~---~~~~~~E~~-~~~~p~~~Yg~sK~~~E~~~~~ 155 (314)
T COG0451 80 SNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDP---PPLPIDEDL-GPPRPLNPYGVSKLAAEQLLRA 155 (314)
T ss_pred hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCC---CCCCccccc-CCCCCCCHHHHHHHHHHHHHHH
Confidence 111123457899999999999999999999999988888777651 111567763 3667777999999999999999
Q ss_pred HHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCCCCcEE
Q 017290 186 YTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVN 265 (374)
Q Consensus 186 ~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~~~~~~ 265 (374)
+...++++++++||+.+|||++...........++.........+...+++...++++|++|++++++.+++++....||
T Consensus 156 ~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~n 235 (314)
T COG0451 156 YARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGGVFN 235 (314)
T ss_pred HHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCcEEE
Confidence 99888899999999999999875431123444444444443333566667788889999999999999999987544999
Q ss_pred ecCCC-ccCHHHHHHHHHHhcCCCCC-cccCC---CCCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHHHhh
Q 017290 266 IGSDE-MVSMNEMAEIVLSFEDKKLP-IHHIP---GPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQI 337 (374)
Q Consensus 266 i~~~~-~~s~~e~~~~i~~~~g~~~~-~~~~~---~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 337 (374)
+++++ .+++.|+++.+.+.+|.+.+ +...+ ..........|..+++..|||.|.+++++++.++++|+....
T Consensus 236 i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 312 (314)
T COG0451 236 IGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL 312 (314)
T ss_pred eCCCCCcEEHHHHHHHHHHHhCCCCcceeecCCCCCCcccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence 99987 99999999999999998765 33333 233346678899999999999999999999999999998754
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=299.90 Aligned_cols=296 Identities=18% Similarity=0.147 Sum_probs=225.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-----c--ccccceeEEecccchhhHhhhccCCCEEEEc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-----E--DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNL 97 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~--~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~ 97 (374)
++|+||||||+||||+++++.|+++||+|++++|+...... . ....++++.+|+++.+.+.++++++|+|||+
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~ 88 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFHT 88 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEEe
Confidence 56889999999999999999999999999999997653210 0 0124678899999999999999999999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecc-cccCCCcccccccCCCCCCCC----CCCCCCch
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA-CIYPEFKQLETNVSLKESDAW----PAEPQDAY 172 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~-~vy~~~~~~~~~~~~~e~~~~----~~~~~~~y 172 (374)
|+.. ..++...++.|+.++.+++++|++.++++|||+||. .+|+..... .+..++|+++. +..|.+.|
T Consensus 89 A~~~------~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~-~~~~~~E~~~~~~~~~~~p~~~Y 161 (342)
T PLN02214 89 ASPV------TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRD-PEAVVDESCWSDLDFCKNTKNWY 161 (342)
T ss_pred cCCC------CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCC-CCcccCcccCCChhhccccccHH
Confidence 9853 234567788999999999999999999999999995 688753211 11246676532 23467889
Q ss_pred HHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHH
Q 017290 173 GLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV 252 (374)
Q Consensus 173 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i 252 (374)
+.+|..+|.+++.|.++.+++++++||+.+|||..... ....+..++ ..+. +... .+ +++.++|||++|+|+++
T Consensus 162 ~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~-~~~~~~~~~-~~~~-g~~~-~~--~~~~~~~i~V~Dva~a~ 235 (342)
T PLN02214 162 CYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPT-INASLYHVL-KYLT-GSAK-TY--ANLTQAYVDVRDVALAH 235 (342)
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC-CCchHHHHH-HHHc-CCcc-cC--CCCCcCeeEHHHHHHHH
Confidence 99999999999999988899999999999999975321 111222232 3333 2222 22 34578999999999999
Q ss_pred HhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCC-CCCcccCCC-CCCCcccccchHHHHHhcCCCcCCCHHHHHHHH
Q 017290 253 LRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDK-KLPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRIT 329 (374)
Q Consensus 253 ~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~-~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~ 329 (374)
+.+++++ .++.||+++ ..+++.|+++.+.+.++. +.+....+. +.......+|++|++ +|||+| ++++++|+++
T Consensus 236 ~~al~~~~~~g~yn~~~-~~~~~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~LG~~p-~~lee~i~~~ 312 (342)
T PLN02214 236 VLVYEAPSASGRYLLAE-SARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIK-DLGLEF-TSTKQSLYDT 312 (342)
T ss_pred HHHHhCcccCCcEEEec-CCCCHHHHHHHHHHHCCCCCCCCCCccccCCCCCccccCcHHHH-HcCCcc-cCHHHHHHHH
Confidence 9999876 467999986 678999999999999853 322222111 222344568999998 599999 5999999999
Q ss_pred HHHHHHh
Q 017290 330 YFWIKEQ 336 (374)
Q Consensus 330 ~~~~~~~ 336 (374)
++|+++.
T Consensus 313 ~~~~~~~ 319 (342)
T PLN02214 313 VKSLQEK 319 (342)
T ss_pred HHHHHHc
Confidence 9999853
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=278.99 Aligned_cols=300 Identities=27% Similarity=0.425 Sum_probs=242.7
Q ss_pred CeEEEEcCcchhHHHHHHHHHhC--CCEEEEEeCCC---C-ccc--ccccccceeEEecccchhhHhhhcc--CCCEEEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSE--GHYIIASDWKK---N-EHM--TEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFN 96 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~---~-~~~--~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~ 96 (374)
++++||||.||||++.+..+... .++.+.++--. + ... ....++.+++.+|+.+...+..++. .+|.|||
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 88999999999999999999886 56666655321 1 100 1123466899999999988888875 7899999
Q ss_pred cccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHh
Q 017290 97 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLE 175 (374)
Q Consensus 97 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~s 175 (374)
+|+..+. ..+--++-.....|+.++..|+++++.+| +++|||+||..|||+...... ..|.+ ..+|.++|+.+
T Consensus 87 faa~t~v-d~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~---~~E~s--~~nPtnpyAas 160 (331)
T KOG0747|consen 87 FAAQTHV-DRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAV---VGEAS--LLNPTNPYAAS 160 (331)
T ss_pred hHhhhhh-hhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcccccc---ccccc--cCCCCCchHHH
Confidence 9997652 23333555667889999999999999985 889999999999999765321 22555 78999999999
Q ss_pred HHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhh
Q 017290 176 KLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255 (374)
Q Consensus 176 K~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~ 255 (374)
|+++|..+++|...++++++++|.++||||+.. ....++.++..... +.+.++.|+|.+.++|+|++|+++++..+
T Consensus 161 KaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~---~~klipkFi~l~~~-~~~~~i~g~g~~~rs~l~veD~~ea~~~v 236 (331)
T KOG0747|consen 161 KAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQY---PEKLIPKFIKLAMR-GKEYPIHGDGLQTRSYLYVEDVSEAFKAV 236 (331)
T ss_pred HHHHHHHHHHHhhccCCcEEEEeccCccCCCcC---hHHHhHHHHHHHHh-CCCcceecCcccceeeEeHHHHHHHHHHH
Confidence 999999999999999999999999999999875 34566777665444 67888999999999999999999999999
Q ss_pred hccCC-CCcEEecCCCccCHHHHHHHHHHhcCCCCC-------cccCC-CCCCCcccccchHHHHHhcCCCcCCCHHHHH
Q 017290 256 TKSDF-REPVNIGSDEMVSMNEMAEIVLSFEDKKLP-------IHHIP-GPEGVRGRNSDNTLIKEKLGWAPSMKLKDGL 326 (374)
Q Consensus 256 ~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~-------~~~~~-~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l 326 (374)
.++.. +++||++++.+.+..|+++.+.+.+....+ +..++ .+.....+.++++|++ .|||+|.++++++|
T Consensus 237 ~~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik-~LGw~~~~p~~eGL 315 (331)
T KOG0747|consen 237 LEKGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIK-KLGWRPTTPWEEGL 315 (331)
T ss_pred HhcCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHH-hcCCcccCcHHHHH
Confidence 88875 999999999999999999998877765222 11222 1223455788999999 79999999999999
Q ss_pred HHHHHHHHHhh
Q 017290 327 RITYFWIKEQI 337 (374)
Q Consensus 327 ~~~~~~~~~~~ 337 (374)
+.+++||.+..
T Consensus 316 rktie~y~~~~ 326 (331)
T KOG0747|consen 316 RKTIEWYTKNF 326 (331)
T ss_pred HHHHHHHHhhh
Confidence 99999999876
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=298.98 Aligned_cols=289 Identities=21% Similarity=0.309 Sum_probs=213.8
Q ss_pred EEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccch---hh-Hhhhc-----cCCCEEEEccc
Q 017290 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVM---DN-CLKVT-----KGVDHVFNLAA 99 (374)
Q Consensus 29 ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~---~~-~~~~~-----~~~d~vi~~a~ 99 (374)
||||||+||||++|++.|+++|++++++.|+....... ..+..+|+.|. +. +..++ .++|+|||||+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~ 77 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF----VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGA 77 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH----HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECce
Confidence 89999999999999999999999777766554321110 12233444443 33 23333 26999999998
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHH
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAS 179 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~ 179 (374)
..+.. ..+.+..++.|+.++.+|+++|++.++ +|||+||.++|+.... .+++|++ +..|.+.|+.+|..+
T Consensus 78 ~~~~~---~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~----~~~~E~~--~~~p~~~Y~~sK~~~ 147 (308)
T PRK11150 78 CSSTT---EWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTD----DFIEERE--YEKPLNVYGYSKFLF 147 (308)
T ss_pred ecCCc---CCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCC----CCCccCC--CCCCCCHHHHHHHHH
Confidence 64321 223445788999999999999999998 6999999999986432 1355555 567888999999999
Q ss_pred HHHHHHHHhhhCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEee-CCCcccccceeHHHHHHHHHhhhc
Q 017290 180 EELCKHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMW-GDGLQTRSFTFIDECVEGVLRLTK 257 (374)
Q Consensus 180 E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~Dva~~i~~~~~ 257 (374)
|++++.+....+++++++||+.+||+++.... .......++..... +....++ ++++..++|+|++|+|++++.+++
T Consensus 148 E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~ 226 (308)
T PRK11150 148 DEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNN-GENPKLFEGSENFKRDFVYVGDVAAVNLWFWE 226 (308)
T ss_pred HHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhc-CCCCEEecCCCceeeeeeeHHHHHHHHHHHHh
Confidence 99999998888999999999999999764321 11222333344443 4433343 566678999999999999999998
Q ss_pred cCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCC-----CcccccchHHHHHhcCCCcC-CCHHHHHHHHHH
Q 017290 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-----VRGRNSDNTLIKEKLGWAPS-MKLKDGLRITYF 331 (374)
Q Consensus 258 ~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-----~~~~~~d~~k~~~~lg~~p~-~~~~~~l~~~~~ 331 (374)
+..+++||+++++.+++.|+++.+.+.++.. ++...+.+.. ......|++|+++ +||+|. .+++++|+++++
T Consensus 227 ~~~~~~yni~~~~~~s~~el~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~-~g~~p~~~~~~~gl~~~~~ 304 (308)
T PRK11150 227 NGVSGIFNCGTGRAESFQAVADAVLAYHKKG-EIEYIPFPDKLKGRYQAFTQADLTKLRA-AGYDKPFKTVAEGVAEYMA 304 (308)
T ss_pred cCCCCeEEcCCCCceeHHHHHHHHHHHhCCC-cceeccCccccccccceecccCHHHHHh-cCCCCCCCCHHHHHHHHHH
Confidence 8777899999999999999999999998852 1222222221 1234689999986 799987 599999999999
Q ss_pred HHH
Q 017290 332 WIK 334 (374)
Q Consensus 332 ~~~ 334 (374)
|+.
T Consensus 305 ~~~ 307 (308)
T PRK11150 305 WLN 307 (308)
T ss_pred Hhh
Confidence 975
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=299.25 Aligned_cols=303 Identities=20% Similarity=0.268 Sum_probs=234.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc--CCCEEEEc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNL 97 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~ 97 (374)
|+||||||+||||+++++.|+++|++|++++|........ ....+.++.+|++|.+.+.++++ ++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 6899999999999999999999999999998653321110 11235678899999998888876 69999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCC-CCCCchHHhH
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA-EPQDAYGLEK 176 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~-~~~~~y~~sK 176 (374)
|+..... .........+..|+.++.+++++|++.++++||++||.++|+.... .+++|++ +. .|.+.|+.+|
T Consensus 81 a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~----~~~~E~~--~~~~p~~~Y~~sK 153 (338)
T PRK10675 81 AGLKAVG-ESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPK----IPYVESF--PTGTPQSPYGKSK 153 (338)
T ss_pred Ccccccc-chhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCC----Ccccccc--CCCCCCChhHHHH
Confidence 9865321 1122345678899999999999999999999999999999985432 2467776 43 5788999999
Q ss_pred HHHHHHHHHHHhhh-CCcEEEEeeCcccCCCCCCCC--C----CCcHHHHHHHHhccC-CceEeeC------CCcccccc
Q 017290 177 LASEELCKHYTKDF-GIECRVGRFHNIYGPFGTWKG--M----EKAPAAFCRKALTST-DKFEMWG------DGLQTRSF 242 (374)
Q Consensus 177 ~~~E~~~~~~~~~~-~~~~~ilR~~~v~g~~~~~~~--~----~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~ 242 (374)
..+|++++.+++.. +++++++|++.+||+...... . ...+..++.....+. ..+.+++ ++.+.++|
T Consensus 154 ~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 233 (338)
T PRK10675 154 LMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY 233 (338)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEee
Confidence 99999999997653 799999999999997532110 0 111233444444332 3344544 56788999
Q ss_pred eeHHHHHHHHHhhhccC----CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCC-CCcccccchHHHHHhcCCC
Q 017290 243 TFIDECVEGVLRLTKSD----FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE-GVRGRNSDNTLIKEKLGWA 317 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~d~~k~~~~lg~~ 317 (374)
+|++|+|++++.+++.. .+++||+++++.+++.|+++.+.+.+|.+.++...|... .......|++|+++++||+
T Consensus 234 v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~ 313 (338)
T PRK10675 234 IHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWR 313 (338)
T ss_pred EEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCCCCCchhhhhcCHHHHHHHhCCC
Confidence 99999999999988752 357999999999999999999999999887665544322 2445678999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHh
Q 017290 318 PSMKLKDGLRITYFWIKEQ 336 (374)
Q Consensus 318 p~~~~~~~l~~~~~~~~~~ 336 (374)
|.++++++|+++++|++++
T Consensus 314 p~~~~~~~~~~~~~~~~~~ 332 (338)
T PRK10675 314 VTRTLDEMAQDTWHWQSRH 332 (338)
T ss_pred CcCcHHHHHHHHHHHHHhh
Confidence 9999999999999999875
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=324.76 Aligned_cols=305 Identities=25% Similarity=0.344 Sum_probs=239.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhC--CCEEEEEeCCCC--cccc----cccccceeEEecccchhhHhhhc--cCCCEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSE--GHYIIASDWKKN--EHMT----EDMFCHEFHLVDLRVMDNCLKVT--KGVDHV 94 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~--~~~~----~~~~~i~~~~~dl~~~~~~~~~~--~~~d~v 94 (374)
.+|+|||||||||||+++++.|+++ +++|++++|... .... ....+++++.+|+.|.+.+..++ .++|+|
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V 84 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI 84 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence 4589999999999999999999998 689999987531 1100 11235788999999988877665 589999
Q ss_pred EEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchH
Q 017290 95 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 173 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~ 173 (374)
||||+..... ....++...+++|+.++.+++++|++.+ +++|||+||..+|+.....+ ..+..|+. +..|.+.|+
T Consensus 85 iHlAa~~~~~-~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~-~~~~~E~~--~~~p~~~Y~ 160 (668)
T PLN02260 85 MHFAAQTHVD-NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDA-DVGNHEAS--QLLPTNPYS 160 (668)
T ss_pred EECCCccCch-hhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCcccc-ccCccccC--CCCCCCCcH
Confidence 9999975421 1122345677899999999999999987 88999999999998754211 00124444 556888999
Q ss_pred HhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHH
Q 017290 174 LEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVL 253 (374)
Q Consensus 174 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~ 253 (374)
.+|..+|.+++.+....+++++++||+.+||++.. ....+..++.... .+.++.+++++.+.++|+|++|+|++++
T Consensus 161 ~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~---~~~~i~~~~~~a~-~g~~i~i~g~g~~~r~~ihV~Dva~a~~ 236 (668)
T PLN02260 161 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF---PEKLIPKFILLAM-QGKPLPIHGDGSNVRSYLYCEDVAEAFE 236 (668)
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCC---cccHHHHHHHHHh-CCCCeEEecCCCceEeeEEHHHHHHHHH
Confidence 99999999999998888999999999999999753 2234555555444 4677888899999999999999999999
Q ss_pred hhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCC--cccCCC-CCCCcccccchHHHHHhcCCCcCCCHHHHHHHH
Q 017290 254 RLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLP--IHHIPG-PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRIT 329 (374)
Q Consensus 254 ~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~-~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~ 329 (374)
.++++. .+++||+++++.+++.|+++.+.+.+|.+.. +...+. +.......+|++|++ +|||.|.++++++|+++
T Consensus 237 ~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~-~lGw~p~~~~~egl~~~ 315 (668)
T PLN02260 237 VVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLK-KLGWQERTSWEEGLKKT 315 (668)
T ss_pred HHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHH-HcCCCCCCCHHHHHHHH
Confidence 998775 4789999999999999999999999987532 222221 222344568999997 59999999999999999
Q ss_pred HHHHHHhhh
Q 017290 330 YFWIKEQIE 338 (374)
Q Consensus 330 ~~~~~~~~~ 338 (374)
++|+++...
T Consensus 316 i~w~~~~~~ 324 (668)
T PLN02260 316 MEWYTSNPD 324 (668)
T ss_pred HHHHHhChh
Confidence 999998654
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-39 Score=295.33 Aligned_cols=299 Identities=26% Similarity=0.394 Sum_probs=236.3
Q ss_pred eEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCc--cc--c-c-ccccceeEEecccchhhHhhhccC--CCEEEEc
Q 017290 28 RISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNE--HM--T-E-DMFCHEFHLVDLRVMDNCLKVTKG--VDHVFNL 97 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~--~-~-~~~~i~~~~~dl~~~~~~~~~~~~--~d~vi~~ 97 (374)
+||||||||+||++++++|++.| ++|++++|.... .. . . ...+++++.+|+.|.+.+.+++++ +|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 58999999999999999999987 789998864321 10 0 0 112567889999999999999986 9999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhH
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEK 176 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK 176 (374)
|+.... .....+....+.+|+.++.+++++|++.+.+ ++|++||..+|+..... .+++|++ +..|.+.|+.+|
T Consensus 81 a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~---~~~~e~~--~~~~~~~Y~~sK 154 (317)
T TIGR01181 81 AAESHV-DRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKG---DAFTETT--PLAPSSPYSASK 154 (317)
T ss_pred ccccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCC---CCcCCCC--CCCCCCchHHHH
Confidence 986531 1223345667889999999999999987544 89999999999875321 1466666 566788999999
Q ss_pred HHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhh
Q 017290 177 LASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 256 (374)
Q Consensus 177 ~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~ 256 (374)
..+|.+++.++.+.+++++++||+.+||+... ....+..++..... +..+.+++++++.++|+|++|+++++..++
T Consensus 155 ~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~---~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~ 230 (317)
T TIGR01181 155 AASDHLVRAYHRTYGLPALITRCSNNYGPYQF---PEKLIPLMITNALA-GKPLPVYGDGQQVRDWLYVEDHCRAIYLVL 230 (317)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEeccccCCCCC---cccHHHHHHHHHhc-CCCceEeCCCceEEeeEEHHHHHHHHHHHH
Confidence 99999999998888999999999999998643 13355556665554 556777788888999999999999999999
Q ss_pred ccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCCc-ccCC-CCCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHH
Q 017290 257 KSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPI-HHIP-GPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWI 333 (374)
Q Consensus 257 ~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~-~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~ 333 (374)
++. .+++||+++++.+++.|+++++.+.++.+... ...+ .+........|++|++++|||.|+++++++++++++|+
T Consensus 231 ~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~ 310 (317)
T TIGR01181 231 EKGRVGETYNIGGGNERTNLEVVETILELLGKDEDLITHVEDRPGHDRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWY 310 (317)
T ss_pred cCCCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccccCCCccchhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 875 46799999999999999999999999864322 1111 12222334689999999999999999999999999999
Q ss_pred HHh
Q 017290 334 KEQ 336 (374)
Q Consensus 334 ~~~ 336 (374)
++.
T Consensus 311 ~~~ 313 (317)
T TIGR01181 311 LDN 313 (317)
T ss_pred Hhc
Confidence 764
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=294.44 Aligned_cols=301 Identities=19% Similarity=0.138 Sum_probs=225.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhccCCCEEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~~~d~vi 95 (374)
..+|+||||||+||||+++++.|+++||+|++++|++...... ....++++.+|+++.+.+.++++++|+||
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 4568999999999999999999999999999988876532110 01246788999999999999999999999
Q ss_pred EcccccCCcccccCCcceehhhhHHHHHHHHHHHHhC-CCCeEEEeecccccCCCcc-cccccCCCCCCCCCC----CCC
Q 017290 96 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRIS-GVKRFFYASSACIYPEFKQ-LETNVSLKESDAWPA----EPQ 169 (374)
Q Consensus 96 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~i~~Ss~~vy~~~~~-~~~~~~~~e~~~~~~----~~~ 169 (374)
|+|+.... .....+....++.|+.++.+++++|.+. ++++||++||..+|+.... ...+.+++|+.+..+ .+.
T Consensus 83 h~A~~~~~-~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~ 161 (325)
T PLN02989 83 HTASPVAI-TVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERK 161 (325)
T ss_pred EeCCCCCC-CCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccc
Confidence 99996431 1222334567889999999999999885 5779999999888754321 011225677763211 124
Q ss_pred CchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHH
Q 017290 170 DAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 249 (374)
+.|+.+|..+|.+++.|.+.++++++++||+++|||..... ......++...+.++..+ + .+.++|+|++|+|
T Consensus 162 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~--~~~~~~~i~~~~~~~~~~---~--~~~r~~i~v~Dva 234 (325)
T PLN02989 162 QWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPT--LNFSVAVIVELMKGKNPF---N--TTHHRFVDVRDVA 234 (325)
T ss_pred cchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCC--CCchHHHHHHHHcCCCCC---C--CcCcCeeEHHHHH
Confidence 68999999999999999988899999999999999975421 123444555555433321 2 3457899999999
Q ss_pred HHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCC---CCCCcccccchHHHHHhcCCCcCCCHHHH
Q 017290 250 EGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG---PEGVRGRNSDNTLIKEKLGWAPSMKLKDG 325 (374)
Q Consensus 250 ~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~---~~~~~~~~~d~~k~~~~lg~~p~~~~~~~ 325 (374)
++++.+++++ .++.||++ +..+++.|+++++.+.++.. .+...+. .........|++|+++ |||.|.++++++
T Consensus 235 ~a~~~~l~~~~~~~~~ni~-~~~~s~~ei~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~l~~g 311 (325)
T PLN02989 235 LAHVKALETPSANGRYIID-GPVVTIKDIENVLREFFPDL-CIADRNEDITELNSVTFNVCLDKVKS-LGIIEFTPTETS 311 (325)
T ss_pred HHHHHHhcCcccCceEEEe-cCCCCHHHHHHHHHHHCCCC-CCCCCCCCcccccccCcCCCHHHHHH-cCCCCCCCHHHH
Confidence 9999999876 36799995 56899999999999999742 1111111 0111345788999886 999999999999
Q ss_pred HHHHHHHHHH
Q 017290 326 LRITYFWIKE 335 (374)
Q Consensus 326 l~~~~~~~~~ 335 (374)
|+++++|+++
T Consensus 312 i~~~~~~~~~ 321 (325)
T PLN02989 312 LRDTVLSLKE 321 (325)
T ss_pred HHHHHHHHHH
Confidence 9999999875
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-39 Score=299.60 Aligned_cols=303 Identities=17% Similarity=0.149 Sum_probs=219.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhccCCCEEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
+.|+||||||+||||++++++|+++|++|++++|+....... ....++++.+|+.+.+.+.++++++|+|||
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH 83 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH 83 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence 568999999999999999999999999999999875432210 012467889999999999999999999999
Q ss_pred cccccCCcccccCCc-ceehhhhHHHHHHHHHHHHhCC-CCeEEEeecccccCCCcccccccCCCCCCCC-------CCC
Q 017290 97 LAADMGGMGFIQSNH-SVIMYNNTMISFNMLEASRISG-VKRFFYASSACIYPEFKQLETNVSLKESDAW-------PAE 167 (374)
Q Consensus 97 ~a~~~~~~~~~~~~~-~~~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~-------~~~ 167 (374)
+|+... ....++ ...+++|+.++.+++++|.+.+ +++|||+||.++|+..... ...++|+.+. +..
T Consensus 84 ~A~~~~---~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~--~~~~~E~~~~~~~~~~~~~~ 158 (351)
T PLN02650 84 VATPMD---FESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQ--KPVYDEDCWSDLDFCRRKKM 158 (351)
T ss_pred eCCCCC---CCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCC--CCccCcccCCchhhhhcccc
Confidence 998643 222233 3678899999999999999987 7899999999877643210 0013444311 123
Q ss_pred CCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHH
Q 017290 168 PQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 247 (374)
|.+.|+.+|..+|.+++.|+.+++++++++||+++|||.........++ ..+ .... +... .++. .+.++|+|++|
T Consensus 159 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~-~~~-~~~~-~~~~-~~~~-~~~r~~v~V~D 233 (351)
T PLN02650 159 TGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLI-TAL-SLIT-GNEA-HYSI-IKQGQFVHLDD 233 (351)
T ss_pred ccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHH-HHH-HHhc-CCcc-ccCc-CCCcceeeHHH
Confidence 4568999999999999999988899999999999999975321111111 111 1122 2211 1222 23479999999
Q ss_pred HHHHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCC-CCcccCCCCCCCcccccchHHHHHhcCCCcCCCHHHH
Q 017290 248 CVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKK-LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDG 325 (374)
Q Consensus 248 va~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~ 325 (374)
+|++++.+++++ .++.| ++++..+++.|+++++.+.++.. .+......+........|+++++ +|||+|+++++++
T Consensus 234 va~a~~~~l~~~~~~~~~-i~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lG~~p~~~l~eg 311 (351)
T PLN02650 234 LCNAHIFLFEHPAAEGRY-ICSSHDATIHDLAKMLREKYPEYNIPARFPGIDEDLKSVEFSSKKLT-DLGFTFKYSLEDM 311 (351)
T ss_pred HHHHHHHHhcCcCcCceE-EecCCCcCHHHHHHHHHHhCcccCCCCCCCCcCcccccccCChHHHH-HhCCCCCCCHHHH
Confidence 999999999876 35678 55668899999999999987632 22111111222334456888875 6999999999999
Q ss_pred HHHHHHHHHHhhhh
Q 017290 326 LRITYFWIKEQIEK 339 (374)
Q Consensus 326 l~~~~~~~~~~~~~ 339 (374)
|+++++|+++....
T Consensus 312 l~~~i~~~~~~~~~ 325 (351)
T PLN02650 312 FDGAIETCREKGLI 325 (351)
T ss_pred HHHHHHHHHHcCCC
Confidence 99999999875533
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=292.52 Aligned_cols=297 Identities=20% Similarity=0.197 Sum_probs=221.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc--------cccccceeEEecccchhhHhhhccCCCEEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT--------EDMFCHEFHLVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
.+++||||||+||||++++++|+++||+|+++.|+...... .....++++.+|+++.+.+.++++++|+|||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 45899999999999999999999999999999987653211 0113578899999999999999999999999
Q ss_pred cccccCCcccccCCc-ceehhhhHHHHHHHHHHHHhC-CCCeEEEeecccccCCCc-ccccccCCCCCCCCCC----CCC
Q 017290 97 LAADMGGMGFIQSNH-SVIMYNNTMISFNMLEASRIS-GVKRFFYASSACIYPEFK-QLETNVSLKESDAWPA----EPQ 169 (374)
Q Consensus 97 ~a~~~~~~~~~~~~~-~~~~~~n~~~~~~ll~a~~~~-~~~~~i~~Ss~~vy~~~~-~~~~~~~~~e~~~~~~----~~~ 169 (374)
+|+... ....++ ...++.|+.++.+++++|++. +++||||+||.++|.... ....+..++|+.+..+ .+.
T Consensus 84 ~A~~~~---~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~ 160 (322)
T PLN02986 84 TASPVF---FTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETK 160 (322)
T ss_pred eCCCcC---CCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccc
Confidence 999643 111222 346788999999999999985 689999999987653211 1111224666653221 246
Q ss_pred CchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHH
Q 017290 170 DAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 249 (374)
+.|+.+|..+|.+++.|.++++++++++||+.+|||..... ......++...+. +... ++ .+.++|+|++|+|
T Consensus 161 ~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~--~~~~~~~~~~~~~-g~~~--~~--~~~~~~v~v~Dva 233 (322)
T PLN02986 161 NWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPT--LNFSVELIVDFIN-GKNL--FN--NRFYRFVDVRDVA 233 (322)
T ss_pred cchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCC--CCccHHHHHHHHc-CCCC--CC--CcCcceeEHHHHH
Confidence 78999999999999999988899999999999999974321 1122344444444 3322 23 4568999999999
Q ss_pred HHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCCCccc--ccchHHHHHhcCCCcCCCHHHHH
Q 017290 250 EGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGR--NSDNTLIKEKLGWAPSMKLKDGL 326 (374)
Q Consensus 250 ~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~--~~d~~k~~~~lg~~p~~~~~~~l 326 (374)
++++.+++++ .++.||++ ++.+++.|+++++.+.++. ..+............ .+|++|++. |||+|+ +++++|
T Consensus 234 ~a~~~al~~~~~~~~yni~-~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~-lg~~~~-~l~e~~ 309 (322)
T PLN02986 234 LAHIKALETPSANGRYIID-GPIMSVNDIIDILRELFPD-LCIADTNEESEMNEMICKVCVEKVKN-LGVEFT-PMKSSL 309 (322)
T ss_pred HHHHHHhcCcccCCcEEEe-cCCCCHHHHHHHHHHHCCC-CCCCCCCccccccccCCccCHHHHHH-cCCccc-CHHHHH
Confidence 9999999876 46799995 5789999999999999863 222111111111122 378998865 999996 999999
Q ss_pred HHHHHHHHH
Q 017290 327 RITYFWIKE 335 (374)
Q Consensus 327 ~~~~~~~~~ 335 (374)
+++++|+++
T Consensus 310 ~~~~~~~~~ 318 (322)
T PLN02986 310 RDTILSLKE 318 (322)
T ss_pred HHHHHHHHH
Confidence 999999876
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=293.02 Aligned_cols=296 Identities=19% Similarity=0.156 Sum_probs=223.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhccCCCEEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
..|+||||||+||||++++++|+++||+|++++|+....... ....++++.+|+.+.+.+..+++++|+|||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 358899999999999999999999999999999876432110 013568899999999999999999999999
Q ss_pred cccccCCcccccCCc-ceehhhhHHHHHHHHHHHHhC-CCCeEEEeeccc--ccCCCcccccccCCCCCCCCCCCC----
Q 017290 97 LAADMGGMGFIQSNH-SVIMYNNTMISFNMLEASRIS-GVKRFFYASSAC--IYPEFKQLETNVSLKESDAWPAEP---- 168 (374)
Q Consensus 97 ~a~~~~~~~~~~~~~-~~~~~~n~~~~~~ll~a~~~~-~~~~~i~~Ss~~--vy~~~~~~~~~~~~~e~~~~~~~~---- 168 (374)
+|+... ....++ ...+++|+.++.+++++|.+. +++||||+||.+ +|+.... ..+.+++|+. +..|
T Consensus 83 ~A~~~~---~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~-~~~~~~~E~~--~~~p~~~~ 156 (322)
T PLN02662 83 TASPFY---HDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPL-TPDVVVDETW--FSDPAFCE 156 (322)
T ss_pred eCCccc---CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCC-CCCCcCCccc--CCChhHhh
Confidence 998643 112233 367889999999999999887 889999999976 4653221 1112466654 2223
Q ss_pred --CCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHH
Q 017290 169 --QDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFID 246 (374)
Q Consensus 169 --~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 246 (374)
.+.|+.+|..+|++++.|.++.+++++++||+.+|||..... ......++...+. +.. . .+++.++|+|++
T Consensus 157 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~--~~~~~~~~~~~~~-~~~--~--~~~~~~~~i~v~ 229 (322)
T PLN02662 157 ESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPT--LNTSAEAILNLIN-GAQ--T--FPNASYRWVDVR 229 (322)
T ss_pred cccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCC--CCchHHHHHHHhc-CCc--c--CCCCCcCeEEHH
Confidence 358999999999999999988899999999999999974321 1233344555444 322 1 124678999999
Q ss_pred HHHHHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCC-CCcccCCCCCCCcccccchHHHHHhcCCCcCCCHHH
Q 017290 247 ECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKK-LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKD 324 (374)
Q Consensus 247 Dva~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~ 324 (374)
|+|++++.+++++ ..+.||++ +..+++.|+++.+.+.++.. .+....+.........+|++|+++ |||++ +++++
T Consensus 230 Dva~a~~~~~~~~~~~~~~~~~-g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~~-~~~~~ 306 (322)
T PLN02662 230 DVANAHIQAFEIPSASGRYCLV-ERVVHYSEVVKILHELYPTLQLPEKCADDKPYVPTYQVSKEKAKS-LGIEF-IPLEV 306 (322)
T ss_pred HHHHHHHHHhcCcCcCCcEEEe-CCCCCHHHHHHHHHHHCCCCCCCCCCCCccccccccccChHHHHH-hCCcc-ccHHH
Confidence 9999999999876 46789997 58899999999999987642 111111112233446789999995 99997 69999
Q ss_pred HHHHHHHHHHHh
Q 017290 325 GLRITYFWIKEQ 336 (374)
Q Consensus 325 ~l~~~~~~~~~~ 336 (374)
+|+++++|++++
T Consensus 307 ~l~~~~~~~~~~ 318 (322)
T PLN02662 307 SLKDTVESLKEK 318 (322)
T ss_pred HHHHHHHHHHHc
Confidence 999999999864
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=297.45 Aligned_cols=313 Identities=18% Similarity=0.153 Sum_probs=221.3
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhccCCCEEEEc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNL 97 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~ 97 (374)
..+.|+||||||+||||++++++|+++|++|++++|+....... ...+++++.+|+.+.+.+.++++++|+|||+
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV 86 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence 34668999999999999999999999999999999875432110 1134678899999999999999999999999
Q ss_pred ccccCCcc-cccCCccee-----hhhhHHHHHHHHHHHHhCC-CCeEEEeecccccCCCccc-ccccCCCCCCCCCC---
Q 017290 98 AADMGGMG-FIQSNHSVI-----MYNNTMISFNMLEASRISG-VKRFFYASSACIYPEFKQL-ETNVSLKESDAWPA--- 166 (374)
Q Consensus 98 a~~~~~~~-~~~~~~~~~-----~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~vy~~~~~~-~~~~~~~e~~~~~~--- 166 (374)
|+...... ....++... ++.|+.++.+++++|++.+ +++|||+||.++|+..... ....+++|+.+.+.
T Consensus 87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~ 166 (353)
T PLN02896 87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHV 166 (353)
T ss_pred CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHh
Confidence 99754211 112233333 3445689999999998875 7899999999999853211 00124555532221
Q ss_pred ----CCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCc-eEeeC---CCcc
Q 017290 167 ----EPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDK-FEMWG---DGLQ 238 (374)
Q Consensus 167 ----~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~ 238 (374)
.+.+.|+.+|.++|++++.|++.++++++++||+++|||+.... ....+..++ ..+.+... ....+ ....
T Consensus 167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~ 244 (353)
T PLN02896 167 WNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPS-VPSSIQVLL-SPITGDSKLFSILSAVNSRMG 244 (353)
T ss_pred hccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCC-CCchHHHHH-HHhcCCccccccccccccccC
Confidence 24468999999999999999988899999999999999974321 111122221 12222111 11111 1112
Q ss_pred cccceeHHHHHHHHHhhhccCC-CCcEEecCCCccCHHHHHHHHHHhcCCC-CCcccCCCCCCCcccccchHHHHHhcCC
Q 017290 239 TRSFTFIDECVEGVLRLTKSDF-REPVNIGSDEMVSMNEMAEIVLSFEDKK-LPIHHIPGPEGVRGRNSDNTLIKEKLGW 316 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~d~~k~~~~lg~ 316 (374)
.++|+|++|+|++++.+++.+. ++.|++ ++..+++.|+++.+.+.++.. ..+...+..........|+++++ .|||
T Consensus 245 ~~dfi~v~Dva~a~~~~l~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lGw 322 (353)
T PLN02896 245 SIALVHIEDICDAHIFLMEQTKAEGRYIC-CVDSYDMSELINHLSKEYPCSNIQVRLDEEKRGSIPSEISSKKLR-DLGF 322 (353)
T ss_pred ceeEEeHHHHHHHHHHHHhCCCcCccEEe-cCCCCCHHHHHHHHHHhCCCCCccccccccccCccccccCHHHHH-HcCC
Confidence 4689999999999999998653 567865 578899999999999988632 22222222212223456888887 5999
Q ss_pred CcCCCHHHHHHHHHHHHHHhhhh
Q 017290 317 APSMKLKDGLRITYFWIKEQIEK 339 (374)
Q Consensus 317 ~p~~~~~~~l~~~~~~~~~~~~~ 339 (374)
+|+++++++|+++++|++++.--
T Consensus 323 ~p~~~l~~~i~~~~~~~~~~~~~ 345 (353)
T PLN02896 323 EYKYGIEEIIDQTIDCCVDHGFL 345 (353)
T ss_pred CccCCHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999987654
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=292.18 Aligned_cols=294 Identities=23% Similarity=0.342 Sum_probs=226.2
Q ss_pred EEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccccccceeEEecccchhhHhhhc----cCCCEEEEcccccCC
Q 017290 29 ISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT----KGVDHVFNLAADMGG 103 (374)
Q Consensus 29 ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~----~~~d~vi~~a~~~~~ 103 (374)
||||||+||||+++++.|+++|+ +|++++|...... ........+.+|+.+.+.+..+. .++|+|||||+...
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~- 78 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHK-FLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSD- 78 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchh-hhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccC-
Confidence 69999999999999999999997 7988877653221 11111245667887777766655 38999999999643
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHH
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELC 183 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~ 183 (374)
....+....+.+|+.++.+++++|++.++ +|||+||.++|+.... ++.|++. +..|.+.|+.+|..+|.++
T Consensus 79 --~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~-----~~~e~~~-~~~p~~~Y~~sK~~~e~~~ 149 (314)
T TIGR02197 79 --TTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEA-----GFREGRE-LERPLNVYGYSKFLFDQYV 149 (314)
T ss_pred --ccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCC-----CcccccC-cCCCCCHHHHHHHHHHHHH
Confidence 23345566788999999999999999887 8999999999986432 3555542 2357889999999999999
Q ss_pred HHHHhh--hCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEee------CCCcccccceeHHHHHHHHHh
Q 017290 184 KHYTKD--FGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMW------GDGLQTRSFTFIDECVEGVLR 254 (374)
Q Consensus 184 ~~~~~~--~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~Dva~~i~~ 254 (374)
+.|... .+++++++|++.+||++..... ....+..++..... +..+.++ +++++.++++|++|++++++.
T Consensus 150 ~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~ 228 (314)
T TIGR02197 150 RRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKA-GGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLW 228 (314)
T ss_pred HHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhc-CCCeEEecCccccCCCCceeeeEEHHHHHHHHHH
Confidence 986532 3578999999999999754322 12344455555444 4455443 457778999999999999999
Q ss_pred hhccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCCC-----cccccchHHHHHhcCCCcCCCHHHHHHHH
Q 017290 255 LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGV-----RGRNSDNTLIKEKLGWAPSMKLKDGLRIT 329 (374)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~-----~~~~~d~~k~~~~lg~~p~~~~~~~l~~~ 329 (374)
++.+..+++||+++++++++.|+++.+.+.+|.+..+...+.+... .....|++|+++.+||.|+++++++++++
T Consensus 229 ~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~p~~~l~~~l~~~ 308 (314)
T TIGR02197 229 LLENGVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALRGKYQYFTQADITKLRAAGYYGPFTTLEEGVKDY 308 (314)
T ss_pred HHhcccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccccccccccccchHHHHHhcCCCCcccHHHHHHHH
Confidence 9988667899999999999999999999999976544444443321 23468999999999999999999999999
Q ss_pred HHHHH
Q 017290 330 YFWIK 334 (374)
Q Consensus 330 ~~~~~ 334 (374)
++|+.
T Consensus 309 ~~~~~ 313 (314)
T TIGR02197 309 VQWLL 313 (314)
T ss_pred HHHHh
Confidence 99974
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=289.41 Aligned_cols=276 Identities=15% Similarity=0.187 Sum_probs=217.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccCCc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMGGM 104 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~~~ 104 (374)
|+||||||+||||+++++.|+++| +|++++|... .+.+|++|.+.+.++++ ++|+|||||+... .
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~-~ 67 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTA-V 67 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------cccCCCCCHHHHHHHHHhcCCCEEEECCccCC-c
Confidence 689999999999999999999999 7998887632 34689999999998887 6999999999754 2
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
..+..+++..+.+|+.++.+++++|++.++ ++||+||.+||+.... .+++|++ +..|.+.|+.+|..+|++++
T Consensus 68 ~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~----~p~~E~~--~~~P~~~Yg~sK~~~E~~~~ 140 (299)
T PRK09987 68 DKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGD----IPWQETD--ATAPLNVYGETKLAGEKALQ 140 (299)
T ss_pred chhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCC----CCcCCCC--CCCCCCHHHHHHHHHHHHHH
Confidence 234455666788999999999999999996 7999999999987532 2578887 67899999999999999998
Q ss_pred HHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCC--CcccccceeHHHHHHHHHhhhccC-CC
Q 017290 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD--GLQTRSFTFIDECVEGVLRLTKSD-FR 261 (374)
Q Consensus 185 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~Dva~~i~~~~~~~-~~ 261 (374)
.+. .+++++|++++|||.. ..++..++.. +..++++.++++ +.+.+.+.+.+|++.++..+++.+ ..
T Consensus 141 ~~~----~~~~ilR~~~vyGp~~-----~~~~~~~~~~-~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~~ 210 (299)
T PRK09987 141 EHC----AKHLIFRTSWVYAGKG-----NNFAKTMLRL-AKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEVA 210 (299)
T ss_pred HhC----CCEEEEecceecCCCC-----CCHHHHHHHH-HhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCCC
Confidence 864 4679999999999864 2345555554 444677888776 556666667778888888877654 46
Q ss_pred CcEEecCCCccCHHHHHHHHHHh---cCCCCC---cccCC-----C-CCCCcccccchHHHHHhcCCCcCCCHHHHHHHH
Q 017290 262 EPVNIGSDEMVSMNEMAEIVLSF---EDKKLP---IHHIP-----G-PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRIT 329 (374)
Q Consensus 262 ~~~~i~~~~~~s~~e~~~~i~~~---~g~~~~---~~~~~-----~-~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~ 329 (374)
++||+++++.+|+.|+++.+.+. .|.+.+ +..++ . ........+|++|+++.|||+|. +|+++|+++
T Consensus 211 giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~~~~lg~~~~-~~~~~l~~~ 289 (299)
T PRK09987 211 GLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLP-DWQVGVKRM 289 (299)
T ss_pred CeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHHHHHhCCCCc-cHHHHHHHH
Confidence 89999999999999999999775 343321 11222 1 12345668899999999999985 999999999
Q ss_pred HHHH
Q 017290 330 YFWI 333 (374)
Q Consensus 330 ~~~~ 333 (374)
++.+
T Consensus 290 ~~~~ 293 (299)
T PRK09987 290 LTEL 293 (299)
T ss_pred HHHH
Confidence 8743
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=286.60 Aligned_cols=295 Identities=18% Similarity=0.215 Sum_probs=230.5
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGF 106 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~ 106 (374)
|+||||||+||||+++++.|+++|++|++++|++.........+++++.+|+.+.+.+.++++++|+|||+|+... .
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~---~ 77 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYR---L 77 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecc---c
Confidence 5899999999999999999999999999999987654333334678999999999999999999999999998543 2
Q ss_pred ccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCC-CCCCchHHhHHHHHHHHHH
Q 017290 107 IQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA-EPQDAYGLEKLASEELCKH 185 (374)
Q Consensus 107 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~-~~~~~y~~sK~~~E~~~~~ 185 (374)
+..+++..++.|+.++.++++++++.+++++|++||..+|+.... +.+++|+.+... .+.+.|+.+|..+|++++.
T Consensus 78 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~---~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~ 154 (328)
T TIGR03466 78 WAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGD---GTPADETTPSSLDDMIGHYKRSKFLAEQAALE 154 (328)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCC---CCCcCccCCCCcccccChHHHHHHHHHHHHHH
Confidence 334566788899999999999999999999999999999985321 124666652211 2246899999999999999
Q ss_pred HHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC-CCcE
Q 017290 186 YTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF-REPV 264 (374)
Q Consensus 186 ~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~-~~~~ 264 (374)
+....+++++++||+.+||++... ......++...+.+.. +... +...+++|++|+|+++..+++++. +..|
T Consensus 155 ~~~~~~~~~~ilR~~~~~G~~~~~---~~~~~~~~~~~~~~~~--~~~~--~~~~~~i~v~D~a~a~~~~~~~~~~~~~~ 227 (328)
T TIGR03466 155 MAAEKGLPVVIVNPSTPIGPRDIK---PTPTGRIIVDFLNGKM--PAYV--DTGLNLVHVDDVAEGHLLALERGRIGERY 227 (328)
T ss_pred HHHhcCCCEEEEeCCccCCCCCCC---CCcHHHHHHHHHcCCC--ceee--CCCcceEEHHHHHHHHHHHHhCCCCCceE
Confidence 988889999999999999997531 1122334444443322 2222 234689999999999999998764 5667
Q ss_pred EecCCCccCHHHHHHHHHHhcCCCCCcccCCCC------------------CC----------CcccccchHHHHHhcCC
Q 017290 265 NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP------------------EG----------VRGRNSDNTLIKEKLGW 316 (374)
Q Consensus 265 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------------------~~----------~~~~~~d~~k~~~~lg~ 316 (374)
+++ ++.+++.|+++.+.+.+|.+.+...+|.+ .. .....+|++|+++.|||
T Consensus 228 ~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~ 306 (328)
T TIGR03466 228 ILG-GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGY 306 (328)
T ss_pred Eec-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHcCC
Confidence 775 68999999999999999987655444421 00 12457899999999999
Q ss_pred CcCCCHHHHHHHHHHHHHHh
Q 017290 317 APSMKLKDGLRITYFWIKEQ 336 (374)
Q Consensus 317 ~p~~~~~~~l~~~~~~~~~~ 336 (374)
+|. +++++|+++++|++++
T Consensus 307 ~p~-~~~~~i~~~~~~~~~~ 325 (328)
T TIGR03466 307 RQR-PAREALRDAVEWFRAN 325 (328)
T ss_pred CCc-CHHHHHHHHHHHHHHh
Confidence 995 9999999999999864
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=275.34 Aligned_cols=297 Identities=20% Similarity=0.171 Sum_probs=228.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc------c--ccccceeEEecccchhhHhhhccCCCEEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT------E--DMFCHEFHLVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~--~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
++|+|+||||+||||++|++.||++||.|+++.|++.+... . .....+.+.+|+.+.+.+.+++++||.|||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 67899999999999999999999999999999999886221 1 122478999999999999999999999999
Q ss_pred cccccCCcccccCC-cceehhhhHHHHHHHHHHHHhCC-CCeEEEeecccccCCC-cccccccCCCCCCCCCCC----CC
Q 017290 97 LAADMGGMGFIQSN-HSVIMYNNTMISFNMLEASRISG-VKRFFYASSACIYPEF-KQLETNVSLKESDAWPAE----PQ 169 (374)
Q Consensus 97 ~a~~~~~~~~~~~~-~~~~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~vy~~~-~~~~~~~~~~e~~~~~~~----~~ 169 (374)
+|.++.. ...+ ..+..+.++.|+.+++++|++.. +||+||+||..+-..+ ........++|+.|.+.. -.
T Consensus 85 ~Asp~~~---~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~ 161 (327)
T KOG1502|consen 85 TASPVDF---DLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKK 161 (327)
T ss_pred eCccCCC---CCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhH
Confidence 9998753 2223 34789999999999999999998 9999999997776554 333334468888764331 23
Q ss_pred CchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHH
Q 017290 170 DAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 249 (374)
..|..+|..+|+.+++|+++++++.+.+-|+.|+||..... -..-...+...+.+.. ..+ ......|+|++|+|
T Consensus 162 ~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~--l~~s~~~~l~~i~G~~--~~~--~n~~~~~VdVrDVA 235 (327)
T KOG1502|consen 162 LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPS--LNSSLNALLKLIKGLA--ETY--PNFWLAFVDVRDVA 235 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccc--cchhHHHHHHHHhccc--ccC--CCCceeeEeHHHHH
Confidence 68999999999999999999999999999999999975431 1222333444444322 111 12344599999999
Q ss_pred HHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCC------CcccccchHHHHHhcCCCcCCCH
Q 017290 250 EGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG------VRGRNSDNTLIKEKLGWAPSMKL 322 (374)
Q Consensus 250 ~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~------~~~~~~d~~k~~~~lg~~p~~~~ 322 (374)
.+.+.+++++ .++.|.|.+ +..++.|+++++.+.+..- + +|.... .....++++|++.+.||.. +++
T Consensus 236 ~AHv~a~E~~~a~GRyic~~-~~~~~~ei~~~l~~~~P~~-~---ip~~~~~~~~~~~~~~~~~~~k~k~lg~~~~-~~l 309 (327)
T KOG1502|consen 236 LAHVLALEKPSAKGRYICVG-EVVSIKEIADILRELFPDY-P---IPKKNAEEHEGFLTSFKVSSEKLKSLGGFKF-RPL 309 (327)
T ss_pred HHHHHHHcCcccCceEEEec-CcccHHHHHHHHHHhCCCC-C---CCCCCCccccccccccccccHHHHhccccee-cCh
Confidence 9999999998 478888885 5555999999999998542 2 222211 2223579999998555665 699
Q ss_pred HHHHHHHHHHHHHh
Q 017290 323 KDGLRITYFWIKEQ 336 (374)
Q Consensus 323 ~~~l~~~~~~~~~~ 336 (374)
++++.++++++++.
T Consensus 310 ~e~~~dt~~sl~~~ 323 (327)
T KOG1502|consen 310 EETLSDTVESLREK 323 (327)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998874
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=272.77 Aligned_cols=308 Identities=22% Similarity=0.280 Sum_probs=248.4
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc---------ccccccceeEEecccchhhHhhhcc--CCCEE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM---------TEDMFCHEFHLVDLRVMDNCLKVTK--GVDHV 94 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~v 94 (374)
.++||||||.||||+|.+-+|+++||.|++++--.+... ......+.++.+|++|...++++++ ++|.|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V 81 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV 81 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence 478999999999999999999999999999986544221 1123478999999999999999997 89999
Q ss_pred EEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHH
Q 017290 95 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGL 174 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~ 174 (374)
+|+|+.-. ...+-.++...+..|+.++.+|++++++++++.+||.||+.+||..... |++|+.+.. .|.++|+.
T Consensus 82 ~Hfa~~~~-vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~i----p~te~~~t~-~p~~pyg~ 155 (343)
T KOG1371|consen 82 MHFAALAA-VGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKV----PITEEDPTD-QPTNPYGK 155 (343)
T ss_pred Eeehhhhc-cchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCccee----eccCcCCCC-CCCCcchh
Confidence 99999754 2344456778899999999999999999999999999999999987654 789998433 49999999
Q ss_pred hHHHHHHHHHHHHhhhCCcEEEEeeCcccC--CCCCCCC-----CCCcHHHHHHHHhccCCceEee------CCCccccc
Q 017290 175 EKLASEELCKHYTKDFGIECRVGRFHNIYG--PFGTWKG-----MEKAPAAFCRKALTSTDKFEMW------GDGLQTRS 241 (374)
Q Consensus 175 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g--~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 241 (374)
+|..+|+++.++.......++.||.++++| |...... ..++++......+-..+...+. .+|+..+.
T Consensus 156 tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrd 235 (343)
T KOG1371|consen 156 TKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRD 235 (343)
T ss_pred hhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeec
Confidence 999999999999998889999999999999 4322211 2222222111111111222222 25578999
Q ss_pred ceeHHHHHHHHHhhhccCC----CCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCC-CcccccchHHHHHhcCC
Q 017290 242 FTFIDECVEGVLRLTKSDF----REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-VRGRNSDNTLIKEKLGW 316 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~~----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-~~~~~~d~~k~~~~lg~ 316 (374)
++|+-|+|+..+.++++.. -++||++++...++.+++.++.+..|.++++..++.... ......+.+++.++|||
T Consensus 236 yi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~~R~gdv~~~ya~~~~a~~elgw 315 (343)
T KOG1371|consen 236 YIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVPRRNGDVAFVYANPSKAQRELGW 315 (343)
T ss_pred ceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccCCCCCCceeeeeChHHHHHHhCC
Confidence 9999999999999998752 469999999999999999999999999998888876433 45556788999999999
Q ss_pred CcCCCHHHHHHHHHHHHHHhhhh
Q 017290 317 APSMKLKDGLRITYFWIKEQIEK 339 (374)
Q Consensus 317 ~p~~~~~~~l~~~~~~~~~~~~~ 339 (374)
+|.+++++.++++.+|..+....
T Consensus 316 k~~~~iee~c~dlw~W~~~np~g 338 (343)
T KOG1371|consen 316 KAKYGLQEMLKDLWRWQKQNPSG 338 (343)
T ss_pred ccccCHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999886543
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-37 Score=283.49 Aligned_cols=302 Identities=25% Similarity=0.384 Sum_probs=233.2
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-cc----ccceeEEecccchhhHhhhcc--CCCEEEEcccc
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-DM----FCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAAD 100 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~----~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~ 100 (374)
+||||||+|+||+++++.|+++|++|++++|........ .. .+++++.+|+.+.+.+.++++ ++|+|||+|+.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 589999999999999999999999999887643321111 10 145688899999999988886 79999999996
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHH
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASE 180 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E 180 (374)
.... ....+....+..|+.++.+++++|.+.+++++|++||.++|+..... +++|++ +..|.+.|+.+|..+|
T Consensus 81 ~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~----~~~e~~--~~~~~~~y~~sK~~~e 153 (328)
T TIGR01179 81 IAVG-ESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSI----PISEDS--PLGPINPYGRSKLMSE 153 (328)
T ss_pred cCcc-hhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCC----CccccC--CCCCCCchHHHHHHHH
Confidence 5321 12234556788999999999999999998899999999999754321 467776 5568889999999999
Q ss_pred HHHHHHHhh-hCCcEEEEeeCcccCCCCCCC------CCCCcHHHHHHHHhccCCceEeeC------CCcccccceeHHH
Q 017290 181 ELCKHYTKD-FGIECRVGRFHNIYGPFGTWK------GMEKAPAAFCRKALTSTDKFEMWG------DGLQTRSFTFIDE 247 (374)
Q Consensus 181 ~~~~~~~~~-~~~~~~ilR~~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~~D 247 (374)
..++.++.+ .+++++++||+.+||+..... +....+..+..........+.+++ +++..++|+|++|
T Consensus 154 ~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D 233 (328)
T TIGR01179 154 RILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMD 233 (328)
T ss_pred HHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHH
Confidence 999999876 789999999999999864321 012233333333222234444433 4567789999999
Q ss_pred HHHHHHhhhcc----CCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCC-CcccccchHHHHHhcCCCcCCC-
Q 017290 248 CVEGVLRLTKS----DFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-VRGRNSDNTLIKEKLGWAPSMK- 321 (374)
Q Consensus 248 va~~i~~~~~~----~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-~~~~~~d~~k~~~~lg~~p~~~- 321 (374)
++++++.+++. ..+++||+++++++++.|+++.+.+.+|.+.++...+.... ......|+++++++|||+|.++
T Consensus 234 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~ 313 (328)
T TIGR01179 234 LADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRRPGDPASLVADASKIRRELGWQPKYTD 313 (328)
T ss_pred HHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCCCccccchhcchHHHHHHhCCCCCcch
Confidence 99999999875 24689999999999999999999999998876655444322 3344579999999999999987
Q ss_pred HHHHHHHHHHHHHHh
Q 017290 322 LKDGLRITYFWIKEQ 336 (374)
Q Consensus 322 ~~~~l~~~~~~~~~~ 336 (374)
++++++++++|++++
T Consensus 314 l~~~~~~~~~~~~~~ 328 (328)
T TIGR01179 314 LEIIIKTAWRWESRN 328 (328)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999999864
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=289.12 Aligned_cols=281 Identities=20% Similarity=0.243 Sum_probs=217.0
Q ss_pred CCCCeEEEE----cCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-----------cccccceeEEecccchhhHhhhc
Q 017290 24 SEKLRISVT----GAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-----------EDMFCHEFHLVDLRVMDNCLKVT 88 (374)
Q Consensus 24 ~~~~~ilIt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~~i~~~~~dl~~~~~~~~~~ 88 (374)
.++|+|||| |||||||++|++.|+++||+|++++|+...... ....+++++.+|+.|.+.+. ..
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~-~~ 128 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV-AG 128 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-cc
Confidence 356889999 999999999999999999999999998753211 11235788999998733322 12
Q ss_pred cCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 89 KGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 89 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
.++|+|||+++. +..++.+++++|++.|++||||+||.++|+..... +..|++ +..|
T Consensus 129 ~~~d~Vi~~~~~-----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~----p~~E~~--~~~p 185 (378)
T PLN00016 129 AGFDVVYDNNGK-----------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEP----PHVEGD--AVKP 185 (378)
T ss_pred CCccEEEeCCCC-----------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCC----CCCCCC--cCCC
Confidence 479999999752 35568899999999999999999999999864321 355554 3333
Q ss_pred CCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHH
Q 017290 169 QDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 248 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 248 (374)
.. +|..+|.++++ .+++++++||+.+||+... ......++.. +..+.++.+++++.+.++++|++|+
T Consensus 186 ~~----sK~~~E~~l~~----~~l~~~ilRp~~vyG~~~~----~~~~~~~~~~-~~~~~~i~~~g~g~~~~~~i~v~Dv 252 (378)
T PLN00016 186 KA----GHLEVEAYLQK----LGVNWTSFRPQYIYGPGNN----KDCEEWFFDR-LVRGRPVPIPGSGIQLTQLGHVKDL 252 (378)
T ss_pred cc----hHHHHHHHHHH----cCCCeEEEeceeEECCCCC----CchHHHHHHH-HHcCCceeecCCCCeeeceecHHHH
Confidence 32 79999988765 5899999999999999642 1223334444 3446677777888899999999999
Q ss_pred HHHHHhhhccC--CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCC-----------CCcccccchHHHHHhcC
Q 017290 249 VEGVLRLTKSD--FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE-----------GVRGRNSDNTLIKEKLG 315 (374)
Q Consensus 249 a~~i~~~~~~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-----------~~~~~~~d~~k~~~~lg 315 (374)
|++++.+++++ .+++||+++++.+++.|+++.+.+.+|.+..+...+... .......|++|++++||
T Consensus 253 a~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~LG 332 (378)
T PLN00016 253 ASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEELG 332 (378)
T ss_pred HHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCccccCccccccccccccccccCHHHHHHhcC
Confidence 99999999875 478999999999999999999999999876543322111 12233569999999999
Q ss_pred CCcCCCHHHHHHHHHHHHHHhhhhhh
Q 017290 316 WAPSMKLKDGLRITYFWIKEQIEKEK 341 (374)
Q Consensus 316 ~~p~~~~~~~l~~~~~~~~~~~~~~~ 341 (374)
|.|+++++++|+++++||++.....+
T Consensus 333 w~p~~~l~egl~~~~~~~~~~~~~~~ 358 (378)
T PLN00016 333 WTPKFDLVEDLKDRYELYFGRGRDRK 358 (378)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCcc
Confidence 99999999999999999998765543
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=279.44 Aligned_cols=254 Identities=22% Similarity=0.215 Sum_probs=200.5
Q ss_pred EEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCccc--ccccccc-eeEEecccchhhHhhhccCCCEEEEcccccCCc
Q 017290 30 SVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHM--TEDMFCH-EFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGM 104 (374)
Q Consensus 30 lItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~~i-~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~ 104 (374)
|||||+||||++|+++|+++| ++|+++++.+.... .....+. +++.+|++|.+.+.++++++|+|||+|++.+.
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~- 79 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPP- 79 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCccccc-
Confidence 699999999999999999999 79999998876533 1222233 38999999999999999999999999997652
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
+.....+..+++|+.||++|+++|++.+++|+||+||.++++.......-...+|+.+.+..+.+.|+.||.++|++++
T Consensus 80 -~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~ 158 (280)
T PF01073_consen 80 -WGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVL 158 (280)
T ss_pred -cCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHH
Confidence 2234567789999999999999999999999999999999876221110001244443344577899999999999999
Q ss_pred HHHh---hh--CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhcc-
Q 017290 185 HYTK---DF--GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS- 258 (374)
Q Consensus 185 ~~~~---~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~- 258 (374)
+... +. .+.+++|||+.||||++.. .. ..+......+......+++....+++|++|+|.+++++++.
T Consensus 159 ~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~-----~~-~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L 232 (280)
T PF01073_consen 159 EANGSELKNGGRLRTCALRPAGIYGPGDQR-----LV-PRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQAL 232 (280)
T ss_pred hhcccccccccceeEEEEeccEEeCccccc-----cc-chhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHh
Confidence 9876 22 4999999999999998642 22 23333344454555668888889999999999999887542
Q ss_pred --C------CCCcEEecCCCccC-HHHHHHHHHHhcCCCCCc
Q 017290 259 --D------FREPVNIGSDEMVS-MNEMAEIVLSFEDKKLPI 291 (374)
Q Consensus 259 --~------~~~~~~i~~~~~~s-~~e~~~~i~~~~g~~~~~ 291 (374)
+ .++.|+|++++++. ++|+.+.+.+.+|.+.+.
T Consensus 233 ~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~ 274 (280)
T PF01073_consen 233 LEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK 274 (280)
T ss_pred ccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence 2 47899999999999 999999999999998664
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-38 Score=282.09 Aligned_cols=271 Identities=25% Similarity=0.317 Sum_probs=203.1
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccCCc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMGGM 104 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~~~ 104 (374)
|||||+||+|+||++|++.|.++|++|+.++|. ..|+.|.+.+.+.++ ++|+|||||+.. ..
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~-~~ 64 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------DLDLTDPEAVAKLLEAFKPDVVINCAAYT-NV 64 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------CS-TTSHHHHHHHHHHH--SEEEE-------H
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------hcCCCCHHHHHHHHHHhCCCeEeccceee-cH
Confidence 799999999999999999999999999999777 467888888888886 799999999865 34
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
+.++.+++..+.+|+.++.+|+++|.+.++ ++||+||..||++.... +++|++ ++.|.+.||.+|+++|+.++
T Consensus 65 ~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~----~y~E~d--~~~P~~~YG~~K~~~E~~v~ 137 (286)
T PF04321_consen 65 DACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGG----PYTEDD--PPNPLNVYGRSKLEGEQAVR 137 (286)
T ss_dssp HHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSS----SB-TTS------SSHHHHHHHHHHHHHH
T ss_pred HhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCccc----ccccCC--CCCCCCHHHHHHHHHHHHHH
Confidence 577888999999999999999999999998 99999999999876432 589988 77999999999999999999
Q ss_pred HHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCCC---
Q 017290 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR--- 261 (374)
Q Consensus 185 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~~--- 261 (374)
+. ..+++|+|++.+||+.. ..++..+ ...+..++.+.+.. ++.++++|++|+|+++..++++...
T Consensus 138 ~~----~~~~~IlR~~~~~g~~~-----~~~~~~~-~~~~~~~~~i~~~~--d~~~~p~~~~dlA~~i~~l~~~~~~~~~ 205 (286)
T PF04321_consen 138 AA----CPNALILRTSWVYGPSG-----RNFLRWL-LRRLRQGEPIKLFD--DQYRSPTYVDDLARVILELIEKNLSGAS 205 (286)
T ss_dssp HH-----SSEEEEEE-SEESSSS-----SSHHHHH-HHHHHCTSEEEEES--SCEE--EEHHHHHHHHHHHHHHHHH-GG
T ss_pred Hh----cCCEEEEecceecccCC-----CchhhhH-HHHHhcCCeeEeeC--CceeCCEEHHHHHHHHHHHHHhcccccc
Confidence 84 34799999999999942 3344444 44456677888754 5688999999999999999998754
Q ss_pred --CcEEecCCCccCHHHHHHHHHHhcCCCC-CcccCCCC------CCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHH
Q 017290 262 --EPVNIGSDEMVSMNEMAEIVLSFEDKKL-PIHHIPGP------EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332 (374)
Q Consensus 262 --~~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~------~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~ 332 (374)
++||+++++.+|+.|+++.+.+.+|.+. .+..++.. .......+|++|+++.||+++. +++++|+++++.
T Consensus 206 ~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~~~~L~~~kl~~~~g~~~~-~~~~~l~~~~~~ 284 (286)
T PF04321_consen 206 PWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPRNTSLDCRKLKNLLGIKPP-PWREGLEELVKQ 284 (286)
T ss_dssp G-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-SBE-B--HHHHHCTTS----BHHHHHHHHHHH
T ss_pred cceeEEEecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCCcccccHHHHHHccCCCCc-CHHHHHHHHHHH
Confidence 9999999999999999999999999876 33333221 2245668999999999999985 999999999876
Q ss_pred H
Q 017290 333 I 333 (374)
Q Consensus 333 ~ 333 (374)
+
T Consensus 285 ~ 285 (286)
T PF04321_consen 285 Y 285 (286)
T ss_dssp H
T ss_pred h
Confidence 4
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=268.64 Aligned_cols=269 Identities=21% Similarity=0.234 Sum_probs=213.7
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccC--CCEEEEcccccCCcc
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKG--VDHVFNLAADMGGMG 105 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~--~d~vi~~a~~~~~~~ 105 (374)
+||||||+||||++++++|+++||+|++++|. .+|+.+.+.+.+++++ +|+|||+|+.... .
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~ 64 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDV-D 64 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------ccCCCCHHHHHHHHHhCCCCEEEECCccccc-c
Confidence 58999999999999999999999999999985 4688888999988875 5999999986531 1
Q ss_pred cccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHH
Q 017290 106 FIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKH 185 (374)
Q Consensus 106 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~ 185 (374)
.........+++|+.++.+++++|++.+. ++|++||.++|+.... .+++|++ +..|.+.|+.+|..+|+.++.
T Consensus 65 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~----~~~~E~~--~~~~~~~Y~~~K~~~E~~~~~ 137 (287)
T TIGR01214 65 GAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGK----RPYREDD--ATNPLNVYGQSKLAGEQAIRA 137 (287)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCC----CCCCCCC--CCCCcchhhHHHHHHHHHHHH
Confidence 22234556788999999999999999886 8999999999976432 2577776 567888999999999999988
Q ss_pred HHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC--CCCc
Q 017290 186 YTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FREP 263 (374)
Q Consensus 186 ~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~--~~~~ 263 (374)
+ +++++++||+.+||+... ..++..++... ..+.++.+.+ ++.++++|++|+|+++..+++++ .+++
T Consensus 138 ~----~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~-~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~~~~~~ 206 (287)
T TIGR01214 138 A----GPNALIVRTSWLYGGGGG----RNFVRTMLRLA-GRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLARARGV 206 (287)
T ss_pred h----CCCeEEEEeeecccCCCC----CCHHHHHHHHh-hcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhccCCCCe
Confidence 5 679999999999999742 23444454444 3345666654 35789999999999999999875 5899
Q ss_pred EEecCCCccCHHHHHHHHHHhcCCCCCcccC-----------CC-CCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHH
Q 017290 264 VNIGSDEMVSMNEMAEIVLSFEDKKLPIHHI-----------PG-PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYF 331 (374)
Q Consensus 264 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~-----------~~-~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~ 331 (374)
||+++++.+++.|+++.+.+.+|.+...... +. ........+|++|+++.|||. .++++++|.++++
T Consensus 207 ~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~-~~~~~~~l~~~~~ 285 (287)
T TIGR01214 207 YHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGTP-LPHWREALRAYLQ 285 (287)
T ss_pred EEEECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCCC-CccHHHHHHHHHh
Confidence 9999999999999999999999876431111 11 111244578999999999994 4699999998876
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=241.43 Aligned_cols=297 Identities=21% Similarity=0.309 Sum_probs=245.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEccccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADM 101 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~ 101 (374)
||+|||||++|.+|++|.+.+.+.|. +=.++..+ -.+|+++..+.+.++. ++.+|||+|+.+
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s--------------kd~DLt~~a~t~~lF~~ekPthVIhlAAmV 66 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS--------------KDADLTNLADTRALFESEKPTHVIHLAAMV 66 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc--------------ccccccchHHHHHHHhccCCceeeehHhhh
Confidence 58999999999999999999999875 22222211 1478888888888886 899999999998
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCC--CCCC-CCchHHhHHH
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW--PAEP-QDAYGLEKLA 178 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~--~~~~-~~~y~~sK~~ 178 (374)
++.......+.+.+..|+...-|++..|.+.|+++++++.|.|+|++....| ++|..-. |+.| +..|..+|.+
T Consensus 67 GGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yP----IdEtmvh~gpphpsN~gYsyAKr~ 142 (315)
T KOG1431|consen 67 GGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYP----IDETMVHNGPPHPSNFGYSYAKRM 142 (315)
T ss_pred cchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCC----CCHHHhccCCCCCCchHHHHHHHH
Confidence 8765555567788999999999999999999999999999999999987664 4554321 3333 4679999998
Q ss_pred HHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHh---ccC-CceEeeCCCcccccceeHHHHHHHHH
Q 017290 179 SEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKAL---TST-DKFEMWGDGLQTRSFTFIDECVEGVL 253 (374)
Q Consensus 179 ~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~i~~~Dva~~i~ 253 (374)
+.-..+.|..++|-.++.+-|.++|||+++++. ....++.++.++. .++ ..+.+||+|.+.++|+|..|+|++++
T Consensus 143 idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i 222 (315)
T KOG1431|consen 143 IDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFI 222 (315)
T ss_pred HHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHH
Confidence 888889999999999999999999999999887 3455666666542 223 37899999999999999999999999
Q ss_pred hhhccC-CCCcEEecCCC--ccCHHHHHHHHHHhcCCCCCcccC-CCCCCCcccccchHHHHHhcCCCcCCC-HHHHHHH
Q 017290 254 RLTKSD-FREPVNIGSDE--MVSMNEMAEIVLSFEDKKLPIHHI-PGPEGVRGRNSDNTLIKEKLGWAPSMK-LKDGLRI 328 (374)
Q Consensus 254 ~~~~~~-~~~~~~i~~~~--~~s~~e~~~~i~~~~g~~~~~~~~-~~~~~~~~~~~d~~k~~~~lg~~p~~~-~~~~l~~ 328 (374)
.++.+- .-+..+++.++ .+|++|+++.+.++++.+-+.... ..++....+..|++|++. |+|.|+.+ ++++|.+
T Consensus 223 ~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~DGq~kKtasnsKL~s-l~pd~~ft~l~~ai~~ 301 (315)
T KOG1431|consen 223 WVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKSDGQFKKTASNSKLRS-LLPDFKFTPLEQAISE 301 (315)
T ss_pred HHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCCCCCcccccchHHHHH-hCCCcccChHHHHHHH
Confidence 998764 45778888887 899999999999999988766655 456678889999999997 79998865 9999999
Q ss_pred HHHHHHHhhhhhh
Q 017290 329 TYFWIKEQIEKEK 341 (374)
Q Consensus 329 ~~~~~~~~~~~~~ 341 (374)
+++||.+...+.+
T Consensus 302 t~~Wy~~Ny~qar 314 (315)
T KOG1431|consen 302 TVQWYLDNYEQAR 314 (315)
T ss_pred HHHHHHHhHHhhc
Confidence 9999999887765
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=252.64 Aligned_cols=269 Identities=21% Similarity=0.271 Sum_probs=225.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccCCc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMGGM 104 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~~~ 104 (374)
|+|||||++|++|.+|.+.|. .+++|+.++|.. .|++|.+.+.++++ +||+|||+|+... .
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~-v 63 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE---------------LDITDPDAVLEVIRETRPDVVINAAAYTA-V 63 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------ccccChHHHHHHHHhhCCCEEEECccccc-c
Confidence 459999999999999999998 779999999874 78999999999997 7999999999754 5
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
+.++.+++..+.+|..++.++.++|.+.|. ++||+||.+||+...+. ++.|++ +++|.+.||+||+.+|..++
T Consensus 64 D~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~----~Y~E~D--~~~P~nvYG~sKl~GE~~v~ 136 (281)
T COG1091 64 DKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGG----PYKETD--TPNPLNVYGRSKLAGEEAVR 136 (281)
T ss_pred ccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCC----CCCCCC--CCCChhhhhHHHHHHHHHHH
Confidence 677888899999999999999999999998 89999999999887632 699999 88999999999999999999
Q ss_pred HHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC-CCCc
Q 017290 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-FREP 263 (374)
Q Consensus 185 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~-~~~~ 263 (374)
.+ +.+.+|+|.+.+||... .+++..+++ ....++.+.+. .++..+.++..|+|.++..+++.. ..++
T Consensus 137 ~~----~~~~~I~Rtswv~g~~g-----~nFv~tml~-la~~~~~l~vv--~Dq~gsPt~~~dlA~~i~~ll~~~~~~~~ 204 (281)
T COG1091 137 AA----GPRHLILRTSWVYGEYG-----NNFVKTMLR-LAKEGKELKVV--DDQYGSPTYTEDLADAILELLEKEKEGGV 204 (281)
T ss_pred Hh----CCCEEEEEeeeeecCCC-----CCHHHHHHH-HhhcCCceEEE--CCeeeCCccHHHHHHHHHHHHhccccCcE
Confidence 95 46799999999999864 235555544 45556777764 468889999999999999999887 4669
Q ss_pred EEecCCCccCHHHHHHHHHHhcCCCCCcc-cC-----CC-CCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHH
Q 017290 264 VNIGSDEMVSMNEMAEIVLSFEDKKLPIH-HI-----PG-PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332 (374)
Q Consensus 264 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~-~~-----~~-~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~ 332 (374)
||+++...+||.|+++.|.+.++.+.... .. |. ........+|+.|+...+|+.|. +|.++++++++.
T Consensus 205 yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~~g~~~~-~w~~~l~~~~~~ 279 (281)
T COG1091 205 YHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAFGLSLP-EWREALKALLDE 279 (281)
T ss_pred EEEeCCCcccHHHHHHHHHHHhCCCccccccccccccCccCCCCcccccchHHHHHHhCCCCc-cHHHHHHHHHhh
Confidence 99999888999999999999998543222 11 11 12234567999999999999885 999999998764
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-35 Score=267.79 Aligned_cols=275 Identities=15% Similarity=0.119 Sum_probs=213.7
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGF 106 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~ 106 (374)
|+|||||||||||++++++|+++||+|++++|+++........+++++.+|+.|.+.+..+++++|+|||+++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~----- 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSR----- 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCC-----
Confidence 689999999999999999999999999999998654332233468999999999999999999999999997632
Q ss_pred ccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHH
Q 017290 107 IQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHY 186 (374)
Q Consensus 107 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~ 186 (374)
..+.....++|+.++.+++++|++.+++||||+||..+.. .+...|..+|..+|+.+++
T Consensus 76 -~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~-------------------~~~~~~~~~K~~~e~~l~~- 134 (317)
T CHL00194 76 -PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ-------------------YPYIPLMKLKSDIEQKLKK- 134 (317)
T ss_pred -CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc-------------------cCCChHHHHHHHHHHHHHH-
Confidence 2234556778999999999999999999999999964321 1224588999999988765
Q ss_pred HhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC--CCCcE
Q 017290 187 TKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FREPV 264 (374)
Q Consensus 187 ~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~--~~~~~ 264 (374)
.+++++++||+.+|+.. +..+....+ .+.++.+ ..+.+.++++|++|+|++++.+++++ .+++|
T Consensus 135 ---~~l~~tilRp~~~~~~~---------~~~~~~~~~-~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ 200 (317)
T CHL00194 135 ---SGIPYTIFRLAGFFQGL---------ISQYAIPIL-EKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKNKTF 200 (317)
T ss_pred ---cCCCeEEEeecHHhhhh---------hhhhhhhhc-cCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccCcEE
Confidence 68999999999888641 111111222 2334444 44567789999999999999999865 47899
Q ss_pred EecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCC----------------------------CcccccchHHHHHhcCC
Q 017290 265 NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG----------------------------VRGRNSDNTLIKEKLGW 316 (374)
Q Consensus 265 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~----------------------------~~~~~~d~~k~~~~lg~ 316 (374)
|+++++.+|+.|+++.+.+.+|++..+..+|.+.. ......+...+++.||+
T Consensus 201 ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~ 280 (317)
T CHL00194 201 PLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKI 280 (317)
T ss_pred EecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCC
Confidence 99999999999999999999999877666663100 01223467788999999
Q ss_pred CcC--CCHHHHHHHHHHHHHHhhhhhh
Q 017290 317 APS--MKLKDGLRITYFWIKEQIEKEK 341 (374)
Q Consensus 317 ~p~--~~~~~~l~~~~~~~~~~~~~~~ 341 (374)
.|. .++++.+++.+.-..+.+.+..
T Consensus 281 ~p~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (317)
T CHL00194 281 DPNELISLEDYFQEYFERILKRLKDIN 307 (317)
T ss_pred ChhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 983 5899999998887777665543
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-35 Score=262.22 Aligned_cols=306 Identities=22% Similarity=0.235 Sum_probs=242.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCcc-ccc-----ccccceeEEecccchhhHhhhccCCCEEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEH-MTE-----DMFCHEFHLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~-~~~-----~~~~i~~~~~dl~~~~~~~~~~~~~d~vi 95 (374)
..+.+++||||+||+|+|+++.|++++ .+|++++..+... ... ....++++.+|+++...+..+++++ .|+
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 356789999999999999999999998 8999999887521 111 1346788999999999999999999 777
Q ss_pred EcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHh
Q 017290 96 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLE 175 (374)
Q Consensus 96 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~s 175 (374)
|||+... ......+.+..+++|+.+|.+++++|++.+++++||+||..|........ -.+|+.+.|....+.|+.+
T Consensus 81 h~aa~~~-~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~---n~~E~~p~p~~~~d~Y~~s 156 (361)
T KOG1430|consen 81 HCAASPV-PDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPII---NGDESLPYPLKHIDPYGES 156 (361)
T ss_pred EeccccC-ccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecc---cCCCCCCCccccccccchH
Confidence 7777432 23455568889999999999999999999999999999999987655421 2455554454556799999
Q ss_pred HHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhh
Q 017290 176 KLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255 (374)
Q Consensus 176 K~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~ 255 (374)
|+.+|+++++.+...++..++|||+.||||++. .+...+..++..+...-..++++...++++++.++.+.+++
T Consensus 157 Ka~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~------~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA 230 (361)
T KOG1430|consen 157 KALAEKLVLEANGSDDLYTCALRPPGIYGPGDK------RLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILA 230 (361)
T ss_pred HHHHHHHHHHhcCCCCeeEEEEccccccCCCCc------cccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHH
Confidence 999999999988766799999999999999864 33344444555566666668888889999999999998775
Q ss_pred hc----c-C--CCCcEEecCCCccCHHHHHHHHHHhcCCCCC-cccCCCC-------------------CC---------
Q 017290 256 TK----S-D--FREPVNIGSDEMVSMNEMAEIVLSFEDKKLP-IHHIPGP-------------------EG--------- 299 (374)
Q Consensus 256 ~~----~-~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~-------------------~~--------- 299 (374)
.. + + .+++|+|.+++++...++...+.+.+|...+ ....|.. ..
T Consensus 231 ~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~ 310 (361)
T KOG1430|consen 231 ARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVAL 310 (361)
T ss_pred HHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheee
Confidence 43 2 2 5899999999999999999999999999877 3333421 00
Q ss_pred -CcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHHHhhhhh
Q 017290 300 -VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKE 340 (374)
Q Consensus 300 -~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~ 340 (374)
.....++..|++++|||.|..++++++.+++.|+.......
T Consensus 311 ~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~~~~~ 352 (361)
T KOG1430|consen 311 LGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASESDSA 352 (361)
T ss_pred eccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhhhhcc
Confidence 12346799999999999999999999999999887765543
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=276.34 Aligned_cols=288 Identities=16% Similarity=0.089 Sum_probs=214.4
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-----------cccceeEEecccchhhHhhhccCC
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-----------MFCHEFHLVDLRVMDNCLKVTKGV 91 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~i~~~~~dl~~~~~~~~~~~~~ 91 (374)
..++|+||||||+||||+++++.|+++||+|+++.|+........ ..++.++.+|++|.+.+.++++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~ 129 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC 129 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence 456789999999999999999999999999999888653211100 124678899999999999999999
Q ss_pred CEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhC-CCCeEEEeecc--cccCCCcccccccCCCCCCCC----
Q 017290 92 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRIS-GVKRFFYASSA--CIYPEFKQLETNVSLKESDAW---- 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~i~~Ss~--~vy~~~~~~~~~~~~~e~~~~---- 164 (374)
|+|||+++....... ........+.|+.++.+++++|++. +++||||+||. .+|+.......+..++|+++.
T Consensus 130 d~V~hlA~~~~~~~~-~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~ 208 (367)
T PLN02686 130 AGVFHTSAFVDPAGL-SGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESF 208 (367)
T ss_pred cEEEecCeeeccccc-ccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhh
Confidence 999999987532211 1112345677999999999999986 79999999996 577642111101134554321
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccccee
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
+..|.+.|+.+|..+|.+++.|+...+++++++||+++|||+.... .... +...+. + .+.+++++ .++|+|
T Consensus 209 ~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~----~~~~-~~~~~~-g-~~~~~g~g--~~~~v~ 279 (367)
T PLN02686 209 CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRR----NSTA-TIAYLK-G-AQEMLADG--LLATAD 279 (367)
T ss_pred cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCC----CChh-HHHHhc-C-CCccCCCC--CcCeEE
Confidence 2346678999999999999999888899999999999999974311 1111 223333 2 24455544 457999
Q ss_pred HHHHHHHHHhhhcc----CCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCC--CCCCcccccchHHHHHhcCCCc
Q 017290 245 IDECVEGVLRLTKS----DFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG--PEGVRGRNSDNTLIKEKLGWAP 318 (374)
Q Consensus 245 ~~Dva~~i~~~~~~----~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~--~~~~~~~~~d~~k~~~~lg~~p 318 (374)
++|+|++++.+++. ..+++| +++++.+++.|+++.+.+.+|.+......+. +.+......|++|++++|||.|
T Consensus 280 V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~d~~~~~~d~~kl~~~l~~~~ 358 (367)
T PLN02686 280 VERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINKIAGNSSSDDTPARFELSNKKLSRLMSRTR 358 (367)
T ss_pred HHHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcCCCchhhcCCcccccccHHHHHHHHHHhh
Confidence 99999999999874 235678 7788999999999999999998766555542 3456777889999999999998
Q ss_pred CCC
Q 017290 319 SMK 321 (374)
Q Consensus 319 ~~~ 321 (374)
.-.
T Consensus 359 ~~~ 361 (367)
T PLN02686 359 RCC 361 (367)
T ss_pred hcc
Confidence 633
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=265.19 Aligned_cols=269 Identities=20% Similarity=0.173 Sum_probs=209.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCcccc----cccccceeEEecccchhhHhhhccCCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMT----EDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
++|+||||||+||||+++++.|+++| ++|++++|+...... ....++.++.+|+.|.+.+.++++++|+|||+|
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 46899999999999999999999986 799999987543211 111246789999999999999999999999999
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHH
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA 178 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~ 178 (374)
+.... .....++...+++|+.++.+++++|.+.++++||++||.. +..|.+.|+.+|..
T Consensus 83 g~~~~-~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~--------------------~~~p~~~Y~~sK~~ 141 (324)
T TIGR03589 83 ALKQV-PAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDK--------------------AANPINLYGATKLA 141 (324)
T ss_pred ccCCC-chhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCC--------------------CCCCCCHHHHHHHH
Confidence 96432 2234455678899999999999999999988999999953 22456789999999
Q ss_pred HHHHHHHHH---hhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCC-ceEeeCCCcccccceeHHHHHHHHHh
Q 017290 179 SEELCKHYT---KDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTD-KFEMWGDGLQTRSFTFIDECVEGVLR 254 (374)
Q Consensus 179 ~E~~~~~~~---~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~Dva~~i~~ 254 (374)
+|.+++.++ ...+++++++||+++||+.. ..+..+... +..+. .+++ +++.+.++|+|++|++++++.
T Consensus 142 ~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~------~~i~~~~~~-~~~~~~~~~i-~~~~~~r~~i~v~D~a~a~~~ 213 (324)
T TIGR03589 142 SDKLFVAANNISGSKGTRFSVVRYGNVVGSRG------SVVPFFKSL-KEEGVTELPI-TDPRMTRFWITLEQGVNFVLK 213 (324)
T ss_pred HHHHHHHHHhhccccCcEEEEEeecceeCCCC------CcHHHHHHH-HHhCCCCeee-CCCCceEeeEEHHHHHHHHHH
Confidence 999998754 35689999999999999853 244444444 33344 5666 467788999999999999999
Q ss_pred hhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCC--CcccccchHHHHHhcCCCcCCCHHHHHH
Q 017290 255 LTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG--VRGRNSDNTLIKEKLGWAPSMKLKDGLR 327 (374)
Q Consensus 255 ~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~--~~~~~~d~~k~~~~lg~~p~~~~~~~l~ 327 (374)
++++. .+++| ++++..+++.|+++.+.+....+ ..+.... ......|.++++++|||.|++++++++.
T Consensus 214 al~~~~~~~~~-~~~~~~~sv~el~~~i~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~l~~~~~ 284 (324)
T TIGR03589 214 SLERMLGGEIF-VPKIPSMKITDLAEAMAPECPHK----IVGIRPGEKLHEVMITEDDARHTYELGDYYAILPSIS 284 (324)
T ss_pred HHhhCCCCCEE-ccCCCcEEHHHHHHHHHhhCCee----EeCCCCCchhHhhhcChhhhhhhcCCCCeEEEccccc
Confidence 99875 35566 56677899999999999865332 2222222 2335679999999999999999999885
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-35 Score=256.10 Aligned_cols=231 Identities=32% Similarity=0.447 Sum_probs=195.2
Q ss_pred EEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-cccceeEEecccchhhHhhhcc--CCCEEEEcccccCCcc
Q 017290 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMGGMG 105 (374)
Q Consensus 29 ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~~~~ 105 (374)
|||+||+||||++++++|+++|+.|+.+.|++....... ..+++++.+|+.+.+.+.++++ ++|+|||+|+.....
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~- 79 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNP- 79 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHH-
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeecccccc-
Confidence 799999999999999999999999999999887653322 1267899999999999999997 459999999975311
Q ss_pred cccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHH
Q 017290 106 FIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKH 185 (374)
Q Consensus 106 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~ 185 (374)
.........++.|+.++.+++++|++.+++++||+||..+|+..... +++|++ +..|.+.|+.+|..+|++++.
T Consensus 80 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~----~~~e~~--~~~~~~~Y~~~K~~~e~~~~~ 153 (236)
T PF01370_consen 80 ESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGE----PIDEDS--PINPLSPYGASKRAAEELLRD 153 (236)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSS----SBETTS--GCCHSSHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc----cccccc--ccccccccccccccccccccc
Confidence 12246677888999999999999999999999999999999987322 578887 558889999999999999999
Q ss_pred HHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC--CCc
Q 017290 186 YTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF--REP 263 (374)
Q Consensus 186 ~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~--~~~ 263 (374)
+.+.++++++++||+.+||+..........+..++..... ++++.+++++++.++++|++|+|++++.+++++. +++
T Consensus 154 ~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~ 232 (236)
T PF01370_consen 154 YAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALK-GKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGI 232 (236)
T ss_dssp HHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHT-TSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEE
T ss_pred cccccccccccccccccccccccccccccccchhhHHhhc-CCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCE
Confidence 9998999999999999999981111245677777777664 6778888999999999999999999999999986 899
Q ss_pred EEec
Q 017290 264 VNIG 267 (374)
Q Consensus 264 ~~i~ 267 (374)
||++
T Consensus 233 yNig 236 (236)
T PF01370_consen 233 YNIG 236 (236)
T ss_dssp EEES
T ss_pred EEeC
Confidence 9986
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=238.66 Aligned_cols=306 Identities=22% Similarity=0.259 Sum_probs=246.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc----------ccccceeEEecccchhhHhhhcc--CCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE----------DMFCHEFHLVDLRVMDNCLKVTK--GVD 92 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----------~~~~i~~~~~dl~~~~~~~~~~~--~~d 92 (374)
++|+.||||-||+-|++|++.|++.||+|+++.|+.+..... ....+.++.+|++|...+..+++ +||
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd 80 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD 80 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence 358899999999999999999999999999999885432221 22347899999999999999997 899
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCC--CeEEEeecccccCCCcccccccCCCCCCCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV--KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~--~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~ 170 (374)
-|+|+|+.+. ...+-.+++...+++..|+.+|+++.+..+. -||.+.||+..||..... |.+|.. |..|.+
T Consensus 81 EIYNLaAQS~-V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~----pq~E~T--PFyPrS 153 (345)
T COG1089 81 EIYNLAAQSH-VGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEI----PQKETT--PFYPRS 153 (345)
T ss_pred hheecccccc-ccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccC----ccccCC--CCCCCC
Confidence 9999999865 3355567778888999999999999998874 299999999999976543 456666 889999
Q ss_pred chHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHH
Q 017290 171 AYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE 250 (374)
Q Consensus 171 ~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 250 (374)
+|+.+|+.+..+..+|.+.+|+-.+.=++.+--+|.........-+...+.+...+.+.-...|+-+..++|-|..|.++
T Consensus 154 PYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe 233 (345)
T COG1089 154 PYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVE 233 (345)
T ss_pred HHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHH
Confidence 99999999999999999999988777666666666543222222333344444444455556699999999999999999
Q ss_pred HHHhhhccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcc------------------cC-C---CCCCCcccccchH
Q 017290 251 GVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIH------------------HI-P---GPEGVRGRNSDNT 308 (374)
Q Consensus 251 ~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~------------------~~-~---~~~~~~~~~~d~~ 308 (374)
+++.+++++.+..|.+++++..|++|++++..+..|.++..+ .+ | .|.+....+.|.+
T Consensus 234 ~mwlmLQq~~PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgdp~ 313 (345)
T COG1089 234 AMWLMLQQEEPDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGDPT 313 (345)
T ss_pred HHHHHHccCCCCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhhhcCCHH
Confidence 999999999999999999999999999999999999654421 11 1 1344455678999
Q ss_pred HHHHhcCCCcCCCHHHHHHHHHHHHHHhh
Q 017290 309 LIKEKLGWAPSMKLKDGLRITYFWIKEQI 337 (374)
Q Consensus 309 k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 337 (374)
|++++|||+|++++++-+++++++-.+..
T Consensus 314 KA~~~LGW~~~~~~~elv~~Mv~~dl~~~ 342 (345)
T COG1089 314 KAKEKLGWRPEVSLEELVREMVEADLEAA 342 (345)
T ss_pred HHHHHcCCccccCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999776543
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=271.09 Aligned_cols=256 Identities=19% Similarity=0.186 Sum_probs=198.9
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGF 106 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~ 106 (374)
|+|+||||+||||+++++.|+++|++|++++|+..... ..+++++.+|+.|.+.+.++++++|+|||||+...
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~---~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~---- 73 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSW---PSSADFIAADIRDATAVESAMTGADVVAHCAWVRG---- 73 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhc---ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCccc----
Confidence 68999999999999999999999999999998753321 12468899999999999999999999999997432
Q ss_pred ccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHH
Q 017290 107 IQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHY 186 (374)
Q Consensus 107 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~ 186 (374)
..+++|+.++.+++++|++.++++|||+||.. |..+|+++.+
T Consensus 74 ------~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~-------------------------------K~aaE~ll~~- 115 (854)
T PRK05865 74 ------RNDHINIDGTANVLKAMAETGTGRIVFTSSGH-------------------------------QPRVEQMLAD- 115 (854)
T ss_pred ------chHHHHHHHHHHHHHHHHHcCCCeEEEECCcH-------------------------------HHHHHHHHHH-
Confidence 14678999999999999999999999999841 7888887754
Q ss_pred HhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC--CCCcE
Q 017290 187 TKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FREPV 264 (374)
Q Consensus 187 ~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~--~~~~~ 264 (374)
++++++++||+++||++. ..++...+. ..+...+++...++|+|++|+|++++.+++++ .+++|
T Consensus 116 ---~gl~~vILRp~~VYGP~~---------~~~i~~ll~--~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvy 181 (854)
T PRK05865 116 ---CGLEWVAVRCALIFGRNV---------DNWVQRLFA--LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPV 181 (854)
T ss_pred ---cCCCEEEEEeceEeCCCh---------HHHHHHHhc--CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeE
Confidence 589999999999999852 123333321 22223345556779999999999999998654 47899
Q ss_pred EecCCCccCHHHHHHHHHHhcC---CCCCcccCCC---CCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHHHhhh
Q 017290 265 NIGSDEMVSMNEMAEIVLSFED---KKLPIHHIPG---PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIE 338 (374)
Q Consensus 265 ~i~~~~~~s~~e~~~~i~~~~g---~~~~~~~~~~---~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 338 (374)
|+++++.+|+.|+++.+.+... .+......+. ........+|++|+++.|||+|+++++++|+++++||+.++.
T Consensus 182 NIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~ri~ 261 (854)
T PRK05865 182 NLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGRIG 261 (854)
T ss_pred EEECCCcccHHHHHHHHhhhhccCCchhhhhccchhhhhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhcc
Confidence 9999999999999999987431 1111100000 001123468999999999999999999999999999998655
Q ss_pred hhh
Q 017290 339 KEK 341 (374)
Q Consensus 339 ~~~ 341 (374)
..+
T Consensus 262 ~~~ 264 (854)
T PRK05865 262 LGK 264 (854)
T ss_pred ccc
Confidence 443
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-32 Score=245.71 Aligned_cols=274 Identities=18% Similarity=0.196 Sum_probs=198.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMGG 103 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~~ 103 (374)
.|+||||||+||||++|++.|+++|++|++.. .|+.+.+.+...++ ++|+|||||+..+.
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~ 70 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------GRLENRASLEADIDAVKPTHVFNAAGVTGR 70 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------CccCCHHHHHHHHHhcCCCEEEECCcccCC
Confidence 47899999999999999999999999997532 22334444555554 79999999997643
Q ss_pred c--ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCccccc--ccCCCCCCCCCCCCCCchHHhHHHH
Q 017290 104 M--GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLET--NVSLKESDAWPAEPQDAYGLEKLAS 179 (374)
Q Consensus 104 ~--~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~--~~~~~e~~~~~~~~~~~y~~sK~~~ 179 (374)
. .++..++...+++|+.++.+++++|++.+++ ++++||.++|+.....+. +.+++|++. +..+.+.|+.+|.++
T Consensus 71 ~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~-p~~~~s~Yg~sK~~~ 148 (298)
T PLN02778 71 PNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDT-PNFTGSFYSKTKAMV 148 (298)
T ss_pred CCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCC-CCCCCCchHHHHHHH
Confidence 2 2345567788999999999999999999985 677788888875432221 224676652 334568999999999
Q ss_pred HHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC
Q 017290 180 EELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD 259 (374)
Q Consensus 180 E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~ 259 (374)
|.++..|. +..++|+...+|++.. ....++...+. +..+...+ .+++|++|++++++.++++.
T Consensus 149 E~~~~~y~-----~~~~lr~~~~~~~~~~------~~~~fi~~~~~-~~~~~~~~-----~s~~yv~D~v~al~~~l~~~ 211 (298)
T PLN02778 149 EELLKNYE-----NVCTLRVRMPISSDLS------NPRNFITKITR-YEKVVNIP-----NSMTILDELLPISIEMAKRN 211 (298)
T ss_pred HHHHHHhh-----ccEEeeecccCCcccc------cHHHHHHHHHc-CCCeeEcC-----CCCEEHHHHHHHHHHHHhCC
Confidence 99999875 3578898887776421 22345555554 34443322 26999999999999999877
Q ss_pred CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCC-CC------CCcccccchHHHHHhcCCCcCCCHHHHHHHHHHH
Q 017290 260 FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PE------GVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332 (374)
Q Consensus 260 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~------~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~ 332 (374)
.+++||+++++.+|+.|+++++.+.++.+.+.+.+.. +. ......+|++|+++.++-.+. ..+++++.+++-
T Consensus 212 ~~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Ld~~k~~~~~~~~~~-~~~~~~~~~~~~ 290 (298)
T PLN02778 212 LTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDTTKLKREFPELLP-IKESLIKYVFEP 290 (298)
T ss_pred CCCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHHHHHhCCCccccccHHHHHHhcccccc-hHHHHHHHHHHH
Confidence 6789999999999999999999999997532211111 11 111236999999998876443 667888888877
Q ss_pred HHHhh
Q 017290 333 IKEQI 337 (374)
Q Consensus 333 ~~~~~ 337 (374)
++..+
T Consensus 291 ~~~~~ 295 (298)
T PLN02778 291 NKKTK 295 (298)
T ss_pred HHhhh
Confidence 75543
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-32 Score=245.51 Aligned_cols=276 Identities=21% Similarity=0.188 Sum_probs=196.8
Q ss_pred EEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCc-ccc
Q 017290 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGM-GFI 107 (374)
Q Consensus 29 ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~-~~~ 107 (374)
||||||+||||+++++.|+++|++|++++|++.......... ..++.. ..+...+.++|+|||||+..... .+.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~~ 75 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG----YKPWAP-LAESEALEGADAVINLAGEPIADKRWT 75 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee----eecccc-cchhhhcCCCCEEEECCCCCcccccCC
Confidence 699999999999999999999999999999876543221111 112222 34456677999999999864321 122
Q ss_pred cCCcceehhhhHHHHHHHHHHHHhCCCC--eEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHH
Q 017290 108 QSNHSVIMYNNTMISFNMLEASRISGVK--RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKH 185 (374)
Q Consensus 108 ~~~~~~~~~~n~~~~~~ll~a~~~~~~~--~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~ 185 (374)
.......++.|+.++.+++++|++.+++ +||+.||..+|+.... .+++|+. +..+.+.|+..+...|..+..
T Consensus 76 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~----~~~~E~~--~~~~~~~~~~~~~~~e~~~~~ 149 (292)
T TIGR01777 76 EERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSED----RVFTEED--SPAGDDFLAELCRDWEEAAQA 149 (292)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCC----CCcCccc--CCCCCChHHHHHHHHHHHhhh
Confidence 2234556788999999999999999864 5777777788986432 2567765 334555677777777777664
Q ss_pred HHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC-CCCcE
Q 017290 186 YTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-FREPV 264 (374)
Q Consensus 186 ~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~-~~~~~ 264 (374)
+ .+.+++++++||+.+||+... ....++.. ....... .++++++.++++|++|+|+++..+++++ ..++|
T Consensus 150 ~-~~~~~~~~ilR~~~v~G~~~~------~~~~~~~~-~~~~~~~-~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~g~~ 220 (292)
T TIGR01777 150 A-EDLGTRVVLLRTGIVLGPKGG------ALAKMLPP-FRLGLGG-PLGSGRQWFSWIHIEDLVQLILFALENASISGPV 220 (292)
T ss_pred c-hhcCCceEEEeeeeEECCCcc------hhHHHHHH-HhcCccc-ccCCCCcccccEeHHHHHHHHHHHhcCcccCCce
Confidence 4 345899999999999998642 22222221 1111111 2467888999999999999999999875 57899
Q ss_pred EecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCC-----------CcccccchHHHHHhcCCCcCC-CHHHHH
Q 017290 265 NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-----------VRGRNSDNTLIKEKLGWAPSM-KLKDGL 326 (374)
Q Consensus 265 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-----------~~~~~~d~~k~~~~lg~~p~~-~~~~~l 326 (374)
|+++++.+++.|+++.+.+.+|.+..+ ..|.+.. ......++++++. +||+|.+ ++++++
T Consensus 221 ~~~~~~~~s~~di~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~ 292 (292)
T TIGR01777 221 NATAPEPVRNKEFAKALARALHRPAFF-PVPAFVLRALLGEMADLLLKGQRVLPEKLLE-AGFQFQYPDLDEAL 292 (292)
T ss_pred EecCCCccCHHHHHHHHHHHhCCCCcC-cCCHHHHHHHhchhhHHHhCCcccccHHHHh-cCCeeeCcChhhcC
Confidence 999999999999999999999976432 2443210 1345567888875 9999998 588764
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-31 Score=241.02 Aligned_cols=276 Identities=15% Similarity=0.055 Sum_probs=197.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc------cc--ccccceeEEecccchhhHhhhccCCCEEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM------TE--DMFCHEFHLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~--~~~~i~~~~~dl~~~~~~~~~~~~~d~vi 95 (374)
..+++||||||+||||++++++|+++||+|+++.|+.+... .. ...+++++.+|++|.+.+.+++.++|.|+
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~ 83 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLF 83 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence 34678999999999999999999999999999998643211 11 11257888999999999999999999999
Q ss_pred EcccccCCcccccCCcceehhhhHHHHHHHHHHHHhC-CCCeEEEeecccccCCC-cccccccCCCCCCCCCC----CCC
Q 017290 96 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRIS-GVKRFFYASSACIYPEF-KQLETNVSLKESDAWPA----EPQ 169 (374)
Q Consensus 96 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~i~~Ss~~vy~~~-~~~~~~~~~~e~~~~~~----~~~ 169 (374)
|+++.... . ....+..+++|+.++.+++++|.+. +++|+|++||..++... .......+++|+.+.+. .+.
T Consensus 84 ~~~~~~~~--~-~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~ 160 (297)
T PLN02583 84 CCFDPPSD--Y-PSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFK 160 (297)
T ss_pred EeCccCCc--c-cccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcc
Confidence 98764321 1 1234567899999999999999886 58899999998765321 11112235666653211 122
Q ss_pred CchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHH
Q 017290 170 DAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 249 (374)
..|+.+|..+|++++.|.+..+++++++||+.||||..... . . .+. + ...... ...+++||++|+|
T Consensus 161 ~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~-----~-~----~~~-~-~~~~~~--~~~~~~v~V~Dva 226 (297)
T PLN02583 161 LWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQH-----N-P----YLK-G-AAQMYE--NGVLVTVDVNFLV 226 (297)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCc-----h-h----hhc-C-CcccCc--ccCcceEEHHHHH
Confidence 37999999999999999887899999999999999975311 0 1 111 1 111222 2356799999999
Q ss_pred HHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCC-CCcccCCCCCCCcccccchHHHHHhcCCC
Q 017290 250 EGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKK-LPIHHIPGPEGVRGRNSDNTLIKEKLGWA 317 (374)
Q Consensus 250 ~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~d~~k~~~~lg~~ 317 (374)
++++++++.+ .++.|++.++....+.++++++.+.++.- .+..............+++.|+++ |||+
T Consensus 227 ~a~~~al~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~k~~~-l~~~ 295 (297)
T PLN02583 227 DAHIRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPPPYEMQGSEVYQQRIRNKKLNK-LMED 295 (297)
T ss_pred HHHHHHhcCcccCCcEEEecCCCccHHHHHHHHHHhCCCCCCCCcccccCCCccccccChHHHHH-hCcc
Confidence 9999999976 45689888766666789999999987532 211101111223446788899875 8886
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.3e-31 Score=265.25 Aligned_cols=300 Identities=16% Similarity=0.102 Sum_probs=217.9
Q ss_pred CeEEEEcCcchhHHHHHHHHH--hCCCEEEEEeCCCCcccc------cccccceeEEecccch------hhHhhhccCCC
Q 017290 27 LRISVTGAGGFIASHIARRLK--SEGHYIIASDWKKNEHMT------EDMFCHEFHLVDLRVM------DNCLKVTKGVD 92 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~------~~~~~i~~~~~dl~~~------~~~~~~~~~~d 92 (374)
|+|||||||||||++|++.|+ +.|++|++++|+...... ....+++++.+|+.+. +.+..+ +++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence 589999999999999999999 479999999996532110 0113578889999884 345554 8999
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCC-CCCCCCc
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW-PAEPQDA 171 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~-~~~~~~~ 171 (374)
+|||||+.... ..........|+.++.+++++|++.++++|||+||..+|+.... .++|++.. +..+.+.
T Consensus 80 ~Vih~Aa~~~~----~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-----~~~e~~~~~~~~~~~~ 150 (657)
T PRK07201 80 HVVHLAAIYDL----TADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-----VFREDDFDEGQGLPTP 150 (657)
T ss_pred EEEECceeecC----CCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-----ccccccchhhcCCCCc
Confidence 99999996531 22345567889999999999999999999999999999986432 23343311 2334578
Q ss_pred hHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCC--CC--cHHHHHHHHhccCCceEeeCCCcccccceeHHH
Q 017290 172 YGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGM--EK--APAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247 (374)
Q Consensus 172 y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 247 (374)
|+.+|.++|+++++. .+++++++||+.+||+....... .. .+..++.........+.+++.+...++++|++|
T Consensus 151 Y~~sK~~~E~~~~~~---~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vdd 227 (657)
T PRK07201 151 YHRTKFEAEKLVREE---CGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDY 227 (657)
T ss_pred hHHHHHHHHHHHHHc---CCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHH
Confidence 999999999998752 57999999999999986432110 01 112223322111222344455566789999999
Q ss_pred HHHHHHhhhccC--CCCcEEecCCCccCHHHHHHHHHHhcCCCC---CcccCCCCC------------------------
Q 017290 248 CVEGVLRLTKSD--FREPVNIGSDEMVSMNEMAEIVLSFEDKKL---PIHHIPGPE------------------------ 298 (374)
Q Consensus 248 va~~i~~~~~~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~---~~~~~~~~~------------------------ 298 (374)
+++++..+++.+ .+++||+++++++++.|+++.+.+.+|.+. ....+|...
T Consensus 228 va~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (657)
T PRK07201 228 VADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQLGI 307 (657)
T ss_pred HHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHHHHhcCC
Confidence 999999988764 478999999999999999999999999876 444444210
Q ss_pred -------CCcccccchHHHHHhc---CCCcCCCHHHHHHHHHHHHHHhhhhh
Q 017290 299 -------GVRGRNSDNTLIKEKL---GWAPSMKLKDGLRITYFWIKEQIEKE 340 (374)
Q Consensus 299 -------~~~~~~~d~~k~~~~l---g~~p~~~~~~~l~~~~~~~~~~~~~~ 340 (374)
......+|+.++++.| |+.+ -++.+.+...++|+.++++-.
T Consensus 308 ~~~~l~~~~~~~~f~~~~~~~~L~~~~~~~-p~~~~~~~~~~~~~~~~~~~~ 358 (657)
T PRK07201 308 PPEVLDFVNYPTTFDSRETRAALKGSGIEV-PRLASYAPRLWDYWERHLDPD 358 (657)
T ss_pred CHHHHHhccCCCeeccHHHHHHhccCCcCC-CChHHHHHHHHHHHHhcCChh
Confidence 0123367888999888 5443 378899999999998886553
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=250.08 Aligned_cols=256 Identities=17% Similarity=0.112 Sum_probs=190.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC---CEEEEEeCCCCccccc---------------------------ccccceeE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG---HYIIASDWKKNEHMTE---------------------------DMFCHEFH 74 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~---------------------------~~~~i~~~ 74 (374)
.+++|||||||||||++|++.|+..+ .+|+++.|........ ...+++++
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i 89 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV 89 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence 56899999999999999999999864 3689999976521110 01357889
Q ss_pred Eeccc-------chhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhC-CCCeEEEeeccccc
Q 017290 75 LVDLR-------VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRIS-GVKRFFYASSACIY 146 (374)
Q Consensus 75 ~~dl~-------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~i~~Ss~~vy 146 (374)
.+|++ +.+.+..+++++|+|||+|+... + ..++...+.+|+.++.+++++|++. ++++|||+||++||
T Consensus 90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~---~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vy 165 (491)
T PLN02996 90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN---F-DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVC 165 (491)
T ss_pred ecccCCcCCCCChHHHHHHHHhCCCEEEECccccC---C-cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEe
Confidence 99998 34446677789999999999764 2 2356778899999999999999986 68899999999999
Q ss_pred CCCcccccccCCCCCCCC---------------------------------------------CCCCCCchHHhHHHHHH
Q 017290 147 PEFKQLETNVSLKESDAW---------------------------------------------PAEPQDAYGLEKLASEE 181 (374)
Q Consensus 147 ~~~~~~~~~~~~~e~~~~---------------------------------------------~~~~~~~y~~sK~~~E~ 181 (374)
|...+.-.+.++++.... ...+.+.|+.||..+|.
T Consensus 166 G~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~ 245 (491)
T PLN02996 166 GEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEM 245 (491)
T ss_pred cCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHH
Confidence 875421111112110000 01234679999999999
Q ss_pred HHHHHHhhhCCcEEEEeeCcccCCCCCCCC--CC--CcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhc
Q 017290 182 LCKHYTKDFGIECRVGRFHNIYGPFGTWKG--ME--KAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257 (374)
Q Consensus 182 ~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~ 257 (374)
++.++.. +++++++||++|||+...+.. .. ..+..++... ..+....+++++++.++++|++|++++++.++.
T Consensus 246 lv~~~~~--~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~-~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~ 322 (491)
T PLN02996 246 LLGNFKE--NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGY-GKGKLTCFLADPNSVLDVIPADMVVNAMIVAMA 322 (491)
T ss_pred HHHHhcC--CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHh-ccceEeEEecCCCeecceecccHHHHHHHHHHH
Confidence 9998863 799999999999998754321 11 1223333332 334555677899999999999999999999887
Q ss_pred cC-----CCCcEEecCC--CccCHHHHHHHHHHhcCC
Q 017290 258 SD-----FREPVNIGSD--EMVSMNEMAEIVLSFEDK 287 (374)
Q Consensus 258 ~~-----~~~~~~i~~~--~~~s~~e~~~~i~~~~g~ 287 (374)
+. .+.+||++++ .++++.|+++.+.+.++.
T Consensus 323 ~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~ 359 (491)
T PLN02996 323 AHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSK 359 (491)
T ss_pred HhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhh
Confidence 52 3578999998 899999999999988864
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-30 Score=240.12 Aligned_cols=235 Identities=20% Similarity=0.232 Sum_probs=188.6
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc--------cccccceeEEecccchhhHhhhcc----C
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT--------EDMFCHEFHLVDLRVMDNCLKVTK----G 90 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~~i~~~~~dl~~~~~~~~~~~----~ 90 (374)
+..+|+||||||||+||++++++|+++|++|++++|+...... ....+++++.+|++|.+.+..+++ +
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 4567899999999999999999999999999999998653210 012367899999999999999887 5
Q ss_pred CCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~ 170 (374)
+|+||||++.... .....+++|..++.+++++|++.++++||++||.++|. |..
T Consensus 137 ~D~Vi~~aa~~~~------~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~--------------------p~~ 190 (390)
T PLN02657 137 VDVVVSCLASRTG------GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK--------------------PLL 190 (390)
T ss_pred CcEEEECCccCCC------CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC--------------------cch
Confidence 9999999874321 12345778999999999999999999999999987752 234
Q ss_pred chHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc-cceeHHHHH
Q 017290 171 AYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR-SFTFIDECV 249 (374)
Q Consensus 171 ~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~Dva 249 (374)
.|..+|..+|+.+.. ...+++++++||+.+||+.. .++. .+..+.++.++++++..+ ++||++|+|
T Consensus 191 ~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~----------~~~~-~~~~g~~~~~~GdG~~~~~~~I~v~DlA 257 (390)
T PLN02657 191 EFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSLG----------GQVE-IVKDGGPYVMFGDGKLCACKPISEADLA 257 (390)
T ss_pred HHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhcccH----------HHHH-hhccCCceEEecCCcccccCceeHHHHH
Confidence 688999999999876 34689999999999997521 2222 334466777778887654 679999999
Q ss_pred HHHHhhhccC--CCCcEEecCC-CccCHHHHHHHHHHhcCCCCCcccCCC
Q 017290 250 EGVLRLTKSD--FREPVNIGSD-EMVSMNEMAEIVLSFEDKKLPIHHIPG 296 (374)
Q Consensus 250 ~~i~~~~~~~--~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~ 296 (374)
++++.++.++ .+++||++++ +.+|+.|+++++.+.+|++.++..+|.
T Consensus 258 ~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~ 307 (390)
T PLN02657 258 SFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPI 307 (390)
T ss_pred HHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCH
Confidence 9999998754 5789999986 689999999999999999877766664
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-28 Score=206.63 Aligned_cols=277 Identities=18% Similarity=0.167 Sum_probs=199.2
Q ss_pred EEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-CCCEEEEcccccCCcc-c
Q 017290 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-GVDHVFNLAADMGGMG-F 106 (374)
Q Consensus 29 ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-~~d~vi~~a~~~~~~~-~ 106 (374)
|+||||||+||++|+..|.+.||+|++++|++..........+. ..+.+.+... ++|+|||+||..-... |
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~-------~~~~~~~~~~~~~DavINLAG~~I~~rrW 73 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVT-------LWEGLADALTLGIDAVINLAGEPIAERRW 73 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCcccc-------ccchhhhcccCCCCEEEECCCCccccccC
Confidence 68999999999999999999999999999998765443322111 2233444444 7999999999765444 5
Q ss_pred ccCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 107 IQSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 107 ~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
....-+...+..+..|..|.++..+.. ++.+|.-|..+.||..... .++|+++ ...+.-+..-...|+...
T Consensus 74 t~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~----~~tE~~~---~g~~Fla~lc~~WE~~a~ 146 (297)
T COG1090 74 TEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDR----VVTEESP---PGDDFLAQLCQDWEEEAL 146 (297)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCce----eeecCCC---CCCChHHHHHHHHHHHHh
Confidence 555557788899999999999988544 5577777778889987643 5777752 223334444455566555
Q ss_pred HHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhcc-CCceEeeCCCcccccceeHHHHHHHHHhhhccC-CCC
Q 017290 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTS-TDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-FRE 262 (374)
Q Consensus 185 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~-~~~ 262 (374)
.. +..+.+++++|.|.|.++.+. .+..++.-.... |. .+|+|.+.++|||++|++++|..+++++ ..+
T Consensus 147 ~a-~~~gtRvvllRtGvVLs~~GG------aL~~m~~~fk~glGG---~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsG 216 (297)
T COG1090 147 QA-QQLGTRVVLLRTGVVLSPDGG------ALGKMLPLFKLGLGG---KLGSGRQWFSWIHIEDLVNAILFLLENEQLSG 216 (297)
T ss_pred hh-hhcCceEEEEEEEEEecCCCc------chhhhcchhhhccCC---ccCCCCceeeeeeHHHHHHHHHHHHhCcCCCC
Confidence 54 335899999999999998654 333333222111 22 2489999999999999999999999995 699
Q ss_pred cEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCC-----------CcccccchHHHHHhcCCCcCC-CHHHHHHHHH
Q 017290 263 PVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-----------VRGRNSDNTLIKEKLGWAPSM-KLKDGLRITY 330 (374)
Q Consensus 263 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-----------~~~~~~d~~k~~~~lg~~p~~-~~~~~l~~~~ 330 (374)
+||+++|.|++..++.+.+.+.++++.. ..+|.... ......-+.|+.. .||+..| +++++|.+++
T Consensus 217 p~N~taP~PV~~~~F~~al~r~l~RP~~-~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~-aGF~F~y~dl~~AL~~il 294 (297)
T COG1090 217 PFNLTAPNPVRNKEFAHALGRALHRPAI-LPVPSFALRLLLGEMADLLLGGQRVLPKKLEA-AGFQFQYPDLEEALADIL 294 (297)
T ss_pred cccccCCCcCcHHHHHHHHHHHhCCCcc-ccCcHHHHHHHhhhhHHHHhccchhhHHHHHH-CCCeeecCCHHHHHHHHH
Confidence 9999999999999999999999987643 22332100 1122233445554 6888776 7999999886
Q ss_pred H
Q 017290 331 F 331 (374)
Q Consensus 331 ~ 331 (374)
.
T Consensus 295 ~ 295 (297)
T COG1090 295 K 295 (297)
T ss_pred h
Confidence 5
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.5e-29 Score=217.48 Aligned_cols=230 Identities=24% Similarity=0.265 Sum_probs=176.5
Q ss_pred EEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCccccc--------ccccc----eeEEecccchhhHhhhcc--CCCE
Q 017290 29 ISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTE--------DMFCH----EFHLVDLRVMDNCLKVTK--GVDH 93 (374)
Q Consensus 29 ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~--------~~~~i----~~~~~dl~~~~~~~~~~~--~~d~ 93 (374)
||||||+|.||++|+++|++.+ ..|+++++++...... ...++ ..+.+|+.|.+.+..+++ ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 7999999999999999999987 6899999997642211 11123 345899999999999998 9999
Q ss_pred EEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchH
Q 017290 94 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 173 (374)
Q Consensus 94 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~ 173 (374)
|||+|+.-+ ...++.++.+.+++|+.|+.+++++|.++++++||++||..+ .+|.+.||
T Consensus 81 VfHaAA~Kh-Vpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA--------------------v~PtnvmG 139 (293)
T PF02719_consen 81 VFHAAALKH-VPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA--------------------VNPTNVMG 139 (293)
T ss_dssp EEE-------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC--------------------SS--SHHH
T ss_pred EEEChhcCC-CChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc--------------------CCCCcHHH
Confidence 999999644 447788999999999999999999999999999999999643 46889999
Q ss_pred HhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHH
Q 017290 174 LEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE 250 (374)
Q Consensus 174 ~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 250 (374)
.||..+|.++..++... +..++++|+|+|.|..+. .++ .+...++.++++.+ .+++..+-|+.++++++
T Consensus 140 atKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GS------Vip-~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~ 211 (293)
T PF02719_consen 140 ATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGS------VIP-LFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQ 211 (293)
T ss_dssp HHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTS------CHH-HHHHHHHTTSSEEE-CETT-EEEEE-HHHHHH
T ss_pred HHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCc------HHH-HHHHHHHcCCccee-CCCCcEEEEecHHHHHH
Confidence 99999999999998765 589999999999997542 444 44555666889988 46788899999999999
Q ss_pred HHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCC
Q 017290 251 GVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDK 287 (374)
Q Consensus 251 ~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~ 287 (374)
.++.+.... .+++|...-++++++.|+++.+.+..|.
T Consensus 212 Lvl~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g~ 249 (293)
T PF02719_consen 212 LVLQAAALAKGGEIFVLDMGEPVKILDLAEAMIELSGL 249 (293)
T ss_dssp HHHHHHHH--TTEEEEE---TCEECCCHHHHHHHHTT-
T ss_pred HHHHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhccc
Confidence 999988765 6788999888999999999999999974
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=239.63 Aligned_cols=268 Identities=19% Similarity=0.242 Sum_probs=194.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMG 102 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~ 102 (374)
+.|+||||||+||||++|++.|.++|++|... .+|++|.+.+...++ ++|+|||||+..+
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~------------------~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~ 440 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG------------------KGRLEDRSSLLADIRNVKPTHVFNAAGVTG 440 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeEEee------------------ccccccHHHHHHHHHhhCCCEEEECCcccC
Confidence 55899999999999999999999999987321 134667777777765 7999999999764
Q ss_pred C--cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccc--cccCCCCCCCCCCCCCCchHHhHHH
Q 017290 103 G--MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLE--TNVSLKESDAWPAEPQDAYGLEKLA 178 (374)
Q Consensus 103 ~--~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~--~~~~~~e~~~~~~~~~~~y~~sK~~ 178 (374)
. .++++.++...+++|+.++.+|+++|++.++ ++|++||.+||+.....+ .+.+++|++. +..+.+.|+.+|+.
T Consensus 441 ~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~-~~~~~~~Yg~sK~~ 518 (668)
T PLN02260 441 RPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDK-PNFTGSFYSKTKAM 518 (668)
T ss_pred CCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCC-CCCCCChhhHHHHH
Confidence 2 3345667788899999999999999999998 578889999987532111 1225777762 22345899999999
Q ss_pred HHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhcc
Q 017290 179 SEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS 258 (374)
Q Consensus 179 ~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~ 258 (374)
+|++++.+. +..++|+..+|+.... ....++..++.....+.++ .+..+++|++.+++.+++.
T Consensus 519 ~E~~~~~~~-----~~~~~r~~~~~~~~~~------~~~nfv~~~~~~~~~~~vp------~~~~~~~~~~~~~~~l~~~ 581 (668)
T PLN02260 519 VEELLREYD-----NVCTLRVRMPISSDLS------NPRNFITKISRYNKVVNIP------NSMTVLDELLPISIEMAKR 581 (668)
T ss_pred HHHHHHhhh-----hheEEEEEEecccCCC------CccHHHHHHhccceeeccC------CCceehhhHHHHHHHHHHh
Confidence 999998874 4678888888865321 0123344444333333331 2467888899988888876
Q ss_pred CCCCcEEecCCCccCHHHHHHHHHHhcCCCC-----CcccCC--CCCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHH
Q 017290 259 DFREPVNIGSDEMVSMNEMAEIVLSFEDKKL-----PIHHIP--GPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYF 331 (374)
Q Consensus 259 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~-----~~~~~~--~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~ 331 (374)
..+++||++++..+|+.|+++.+.+.++... .....+ .+.......+|++|++..+|. + .+|.++|++++.
T Consensus 582 ~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~a~rp~~~l~~~k~~~~~~~-~-~~~~~~l~~~~~ 659 (668)
T PLN02260 582 NLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAPRSNNEMDASKLKKEFPE-L-LSIKESLIKYVF 659 (668)
T ss_pred CCCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhhhHhhCCCccccccHHHHHHhCcc-c-cchHHHHHHHHh
Confidence 6679999999999999999999999874321 111111 111222338999999998998 5 389999998875
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=224.20 Aligned_cols=249 Identities=18% Similarity=0.174 Sum_probs=183.7
Q ss_pred eEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCcccc---------------c--ccccceeEEecccch------h
Q 017290 28 RISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMT---------------E--DMFCHEFHLVDLRVM------D 82 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~---------------~--~~~~i~~~~~dl~~~------~ 82 (374)
+|||||||||||++++++|+++| ++|+++.|+.+.... . ...+++++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999998 679999998652100 0 003578899998753 3
Q ss_pred hHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 83 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
.+..+.+++|+|||+|+.... ..+.......|+.++.+++++|.+.++++|+|+||.++|+..... ++.+++
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~----~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~----~~~~~~ 152 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNW----VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLS----TVTEDD 152 (367)
T ss_pred HHHHHHhhCCEEEeCCcEecc----CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCC----Cccccc
Confidence 556666799999999996531 223455677899999999999999998899999999999764321 122332
Q ss_pred CC---CCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCC-CCCCcHHHHHHHHhccCCceEeeCCCc-
Q 017290 163 AW---PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDGL- 237 (374)
Q Consensus 163 ~~---~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~- 237 (374)
.. ...+.+.|+.+|..+|.+++.+... +++++++||+.+||+..... +....+..++...+..+ . + ....
T Consensus 153 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~-~--~-p~~~~ 227 (367)
T TIGR01746 153 AIVTPPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALG-A--Y-PDSPE 227 (367)
T ss_pred cccccccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhC-C--C-CCCCc
Confidence 11 1223568999999999999987664 89999999999999733211 12223334444433322 1 1 2222
Q ss_pred ccccceeHHHHHHHHHhhhccCC----CCcEEecCCCccCHHHHHHHHHHhcCCCCC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSDF----REPVNIGSDEMVSMNEMAEIVLSFEDKKLP 290 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~~----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 290 (374)
...+++|++|++++++.++.++. +++||+++++++++.|+++.+.+ .|.+.+
T Consensus 228 ~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~ 283 (367)
T TIGR01746 228 LTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLK 283 (367)
T ss_pred cccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCC
Confidence 35679999999999999887653 68999999999999999999999 777654
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-27 Score=217.94 Aligned_cols=233 Identities=24% Similarity=0.283 Sum_probs=202.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhccC--CCE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTKG--VDH 93 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~~--~d~ 93 (374)
.+|+||||||+|.||+++.+++++.+ .++++++|++.....- ...++.++.+|+.|.+.+..++++ +|+
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~ 328 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI 328 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCce
Confidence 67999999999999999999999986 5889999988642211 124678899999999999999986 999
Q ss_pred EEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchH
Q 017290 94 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 173 (374)
Q Consensus 94 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~ 173 (374)
|||+|+.-+ .+.++.++.+.+++|+.||.|++++|.+.++++||++||.. ..+|.+.||
T Consensus 329 VfHAAA~KH-VPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDK--------------------AV~PtNvmG 387 (588)
T COG1086 329 VFHAAALKH-VPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDK--------------------AVNPTNVMG 387 (588)
T ss_pred EEEhhhhcc-CcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCc--------------------ccCCchHhh
Confidence 999999654 44788999999999999999999999999999999999963 457889999
Q ss_pred HhHHHHHHHHHHHHhhhC---CcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHH
Q 017290 174 LEKLASEELCKHYTKDFG---IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE 250 (374)
Q Consensus 174 ~sK~~~E~~~~~~~~~~~---~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 250 (374)
.+|..+|..+..+..+.. ..++++|.|+|.|..+ .+-.++.+.+.+|.++++ .+++..+-|+.+.|.++
T Consensus 388 aTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG-------SViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~ 459 (588)
T COG1086 388 ATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG-------SVIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQ 459 (588)
T ss_pred HHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC-------CCHHHHHHHHHcCCCccc-cCCCceeEEEEHHHHHH
Confidence 999999999999977433 8899999999999754 344556666777899988 57889999999999999
Q ss_pred HHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcC
Q 017290 251 GVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFED 286 (374)
Q Consensus 251 ~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g 286 (374)
.++.+.... .+++|.+.-|+++++.|+++.+-+..|
T Consensus 460 LVlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~g 496 (588)
T COG1086 460 LVLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAG 496 (588)
T ss_pred HHHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence 999988876 578899999999999999999999997
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=192.87 Aligned_cols=294 Identities=18% Similarity=0.207 Sum_probs=221.8
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------------ccccceeEEecccchhhHhhhcc--CCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------------DMFCHEFHLVDLRVMDNCLKVTK--GVD 92 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------------~~~~i~~~~~dl~~~~~~~~~~~--~~d 92 (374)
+..||||-||+=|++|++.|++.||+|+++.|+.+..... ........++|++|..-+.+++. +++
T Consensus 29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPt 108 (376)
T KOG1372|consen 29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPT 108 (376)
T ss_pred eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCch
Confidence 4678999999999999999999999999999887642211 12356788999999999999887 789
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC---eEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK---RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~---~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
-|.|+|+..+. ..+-+-++-.-++...|+..|+++.+..+.. ||-..||...||.... ++.++.+|.-|.
T Consensus 109 EiYnLaAQSHV-kvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e------~PQsE~TPFyPR 181 (376)
T KOG1372|consen 109 EVYNLAAQSHV-KVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQE------IPQSETTPFYPR 181 (376)
T ss_pred hhhhhhhhcce-EEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccC------CCcccCCCCCCC
Confidence 99999997652 2333445555667788999999999887632 8999999999997653 333344488999
Q ss_pred CchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHH----HHhccCCceEeeCCCcccccceeH
Q 017290 170 DAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCR----KALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
++|+.+|..+-.++.+|.+.+++=.+ -|++|.-..... .+.++.+-+- +...+.+.-..+|+-+..++|-|.
T Consensus 182 SPYa~aKmy~~WivvNyREAYnmfAc---NGILFNHESPRR-GenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA 257 (376)
T KOG1372|consen 182 SPYAAAKMYGYWIVVNYREAYNMFAC---NGILFNHESPRR-GENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHA 257 (376)
T ss_pred ChhHHhhhhheEEEEEhHHhhcceee---ccEeecCCCCcc-ccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchh
Confidence 99999999999999898888774333 333443221111 2344444333 222222333344888899999999
Q ss_pred HHHHHHHHhhhccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCccc-----------------C-C---CCCCCcccc
Q 017290 246 DECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHH-----------------I-P---GPEGVRGRN 304 (374)
Q Consensus 246 ~Dva~~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~-----------------~-~---~~~~~~~~~ 304 (374)
.|.+++++.+++++....|.+..++..|++|+++.....+|..+..+- + | .|.+.....
T Consensus 258 ~dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~Lq 337 (376)
T KOG1372|consen 258 GDYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQ 337 (376)
T ss_pred HHHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhhc
Confidence 999999999999999999999999999999999998888885433220 0 0 123344556
Q ss_pred cchHHHHHhcCCCcCCCHHHHHHHHHH
Q 017290 305 SDNTLIKEKLGWAPSMKLKDGLRITYF 331 (374)
Q Consensus 305 ~d~~k~~~~lg~~p~~~~~~~l~~~~~ 331 (374)
.|.+|+++.|||+|+.++++-+++++.
T Consensus 338 GdasKAk~~LgW~pkv~f~eLVkeMv~ 364 (376)
T KOG1372|consen 338 GDASKAKKTLGWKPKVTFPELVKEMVA 364 (376)
T ss_pred CChHHHHHhhCCCCccCHHHHHHHHHH
Confidence 799999999999999999999999986
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=210.09 Aligned_cols=215 Identities=18% Similarity=0.153 Sum_probs=162.6
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhc------cC-CCEEEEcccc
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT------KG-VDHVFNLAAD 100 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~------~~-~d~vi~~a~~ 100 (374)
+||||||||++|++++++|+++|++|++++|+++... ..+++.+.+|+.|.+.+..++ ++ +|.|+|+++.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~ 77 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP 77 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence 5899999999999999999999999999999986532 235677889999999999988 57 9999999863
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHH
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASE 180 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E 180 (374)
.. + ......+++++|++.|++|||++||..++... ..+..+|
T Consensus 78 ~~-------~-------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~------------------------~~~~~~~ 119 (285)
T TIGR03649 78 IP-------D-------LAPPMIKFIDFARSKGVRRFVLLSASIIEKGG------------------------PAMGQVH 119 (285)
T ss_pred CC-------C-------hhHHHHHHHHHHHHcCCCEEEEeeccccCCCC------------------------chHHHHH
Confidence 21 0 23456789999999999999999996543110 0122344
Q ss_pred HHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC-
Q 017290 181 ELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD- 259 (374)
Q Consensus 181 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~- 259 (374)
+.+++. .+++++++||+.+|++... .+....+.....+ +.+.++..+++++++|+|++++.++..+
T Consensus 120 ~~l~~~---~gi~~tilRp~~f~~~~~~---------~~~~~~~~~~~~~-~~~~g~~~~~~v~~~Dva~~~~~~l~~~~ 186 (285)
T TIGR03649 120 AHLDSL---GGVEYTVLRPTWFMENFSE---------EFHVEAIRKENKI-YSATGDGKIPFVSADDIARVAYRALTDKV 186 (285)
T ss_pred HHHHhc---cCCCEEEEeccHHhhhhcc---------cccccccccCCeE-EecCCCCccCcccHHHHHHHHHHHhcCCC
Confidence 444331 3899999999999865311 1111112222333 3355778899999999999999999875
Q ss_pred -CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCC
Q 017290 260 -FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG 296 (374)
Q Consensus 260 -~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~ 296 (374)
.++.|++.+++.+|+.|+++.+.+.+|+++.+..++.
T Consensus 187 ~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~~~~~~ 224 (285)
T TIGR03649 187 APNTDYVVLGPELLTYDDVAEILSRVLGRKITHVKLTE 224 (285)
T ss_pred cCCCeEEeeCCccCCHHHHHHHHHHHhCCceEEEeCCH
Confidence 3688999999999999999999999999887766654
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.9e-26 Score=221.12 Aligned_cols=244 Identities=15% Similarity=0.134 Sum_probs=175.0
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGF 106 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~ 106 (374)
||||||||+||||++++++|+++||+|++++|.+.... ..+++++.+|+.+.. +.++++++|+|||||+...
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~---~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~---- 72 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL---DPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDT---- 72 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc---cCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCc----
Confidence 58999999999999999999999999999998765321 235788999999874 7788889999999998531
Q ss_pred ccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHH
Q 017290 107 IQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHY 186 (374)
Q Consensus 107 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~ 186 (374)
. .....|+.++.+++++|++.++ ++||+||. |+.. ..|. .+|.++..
T Consensus 73 --~---~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~--------------------~~~~----~aE~ll~~- 119 (699)
T PRK12320 73 --S---APGGVGITGLAHVANAAARAGA-RLLFVSQA--AGRP--------------------ELYR----QAETLVST- 119 (699)
T ss_pred --c---chhhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCC--------------------cccc----HHHHHHHh-
Confidence 0 1124799999999999999998 79999986 3211 0121 35666554
Q ss_pred HhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCCCCcEEe
Q 017290 187 TKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNI 266 (374)
Q Consensus 187 ~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~~~~~~i 266 (374)
++++++++|++++||+..... ....+..++..... + +.+.++|++|++++++.+++.+.+++||+
T Consensus 120 ---~~~p~~ILR~~nVYGp~~~~~-~~r~I~~~l~~~~~-~----------~pI~vIyVdDvv~alv~al~~~~~GiyNI 184 (699)
T PRK12320 120 ---GWAPSLVIRIAPPVGRQLDWM-VCRTVATLLRSKVS-A----------RPIRVLHLDDLVRFLVLALNTDRNGVVDL 184 (699)
T ss_pred ---cCCCEEEEeCceecCCCCccc-HhHHHHHHHHHHHc-C----------CceEEEEHHHHHHHHHHHHhCCCCCEEEE
Confidence 468999999999999854211 11233333332221 2 23345899999999999998776679999
Q ss_pred cCCCccCHHHHHHHHHHhcCCCCCcccCCCCCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHH
Q 017290 267 GSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYF 331 (374)
Q Consensus 267 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~ 331 (374)
++++.+|+.|+++++.... ....++ ........+-|...++..++|.|+..+ ++.+.+.+
T Consensus 185 G~~~~~Si~el~~~i~~~~-p~~~~~---~~~~~~~~~pdi~~a~~~~~w~~~~~~-~~~~~~~~ 244 (699)
T PRK12320 185 ATPDTTNVVTAWRLLRSVD-PHLRTR---RVRSWEQLIPEVDIAAVQEDWNFEFGW-QATEAIVD 244 (699)
T ss_pred eCCCeeEHHHHHHHHHHhC-CCcccc---ccccHHHhCCCCchhhhhcCCCCcchH-HHHHHHHh
Confidence 9999999999999997763 222111 122233445667777778899998766 33333333
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=204.03 Aligned_cols=218 Identities=20% Similarity=0.193 Sum_probs=134.1
Q ss_pred EEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccc---------------c----ccccceeEEecccch------hh
Q 017290 31 VTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMT---------------E----DMFCHEFHLVDLRVM------DN 83 (374)
Q Consensus 31 ItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~---------------~----~~~~i~~~~~dl~~~------~~ 83 (374)
|||||||+|++|+++|++.+. +|+++.|..+.... . ...+++++.+|++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999876 99999998743000 0 145789999999874 45
Q ss_pred HhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccC--CCCC
Q 017290 84 CLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVS--LKES 161 (374)
Q Consensus 84 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~--~~e~ 161 (374)
+..+.+++|+|||||+.+. ...+.+.....|+.++.++++.|.+...++|+|+||+.+.+.......+.. ..+.
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~----~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~ 156 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVN----FNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEED 156 (249)
T ss_dssp HHHHHHH--EEEE--SS-S----BS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--
T ss_pred hhccccccceeeecchhhh----hcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccc
Confidence 6666679999999999874 233667789999999999999999877679999999666655442110000 0111
Q ss_pred C-CCCCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCC-CCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 162 D-AWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGT-WKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 162 ~-~~~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+ .......+.|..||+.+|++++++.++.+++++|+||+.|+|.... ..+.......++...+..+......+.+...
T Consensus 157 ~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 236 (249)
T PF07993_consen 157 DLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDAR 236 (249)
T ss_dssp EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT
T ss_pred cchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCce
Confidence 1 1123455799999999999999999888999999999999994322 2223343556666665544433354555667
Q ss_pred ccceeHHHHHHHH
Q 017290 240 RSFTFIDECVEGV 252 (374)
Q Consensus 240 ~~~i~~~Dva~~i 252 (374)
.++++++.+|++|
T Consensus 237 ~d~vPVD~va~aI 249 (249)
T PF07993_consen 237 LDLVPVDYVARAI 249 (249)
T ss_dssp --EEEHHHHHHHH
T ss_pred EeEECHHHHHhhC
Confidence 9999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.9e-25 Score=212.19 Aligned_cols=256 Identities=15% Similarity=0.097 Sum_probs=182.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC---EEEEEeCCCCcccc-------c--------------------ccccceeE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH---YIIASDWKKNEHMT-------E--------------------DMFCHEFH 74 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~-------~--------------------~~~~i~~~ 74 (374)
..++|||||||||||++|++.|++.+. +|+++.|..+.... . ...++.++
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 579999999999999999999998754 68999997542110 0 02357889
Q ss_pred Eecccch------hhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CCeEEEeecccccC
Q 017290 75 LVDLRVM------DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRFFYASSACIYP 147 (374)
Q Consensus 75 ~~dl~~~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~vy~ 147 (374)
.+|++++ +....+.+++|+|||+|+... + ..+++..+++|+.++.+++++|++.+ +++|||+||++||+
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~---f-~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG 273 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTT---F-DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNG 273 (605)
T ss_pred EeeCCCcccCCCHHHHHHHHhcCCEEEECccccc---c-ccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeec
Confidence 9999986 345566678999999999764 2 24567788999999999999998864 78999999999999
Q ss_pred CCcccccccCCCCC---------------------------------C-CC------------------CCCCCCchHHh
Q 017290 148 EFKQLETNVSLKES---------------------------------D-AW------------------PAEPQDAYGLE 175 (374)
Q Consensus 148 ~~~~~~~~~~~~e~---------------------------------~-~~------------------~~~~~~~y~~s 175 (374)
...+.-.+..++.. . ++ .....+.|..+
T Consensus 274 ~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~T 353 (605)
T PLN02503 274 QRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFT 353 (605)
T ss_pred CCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHH
Confidence 87421111112100 0 00 01123789999
Q ss_pred HHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCC----CCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHH
Q 017290 176 KLASEELCKHYTKDFGIECRVGRFHNIYGPFGT----WKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG 251 (374)
Q Consensus 176 K~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 251 (374)
|.++|.+++++. .+++++|+||+.|.+.... +..........+.... .|.--.++++++...++|+++.++++
T Consensus 354 K~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g-~G~lr~~~~~~~~~~DiVPVD~vvna 430 (605)
T PLN02503 354 KAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYG-KGQLTGFLADPNGVLDVVPADMVVNA 430 (605)
T ss_pred HHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCccccchhhhhee-ccceeEEEeCCCeeEeEEeecHHHHH
Confidence 999999999765 4799999999999442211 1111111222222111 23223366888999999999999999
Q ss_pred HHhhhcc------CCCCcEEecCC--CccCHHHHHHHHHHhcCC
Q 017290 252 VLRLTKS------DFREPVNIGSD--EMVSMNEMAEIVLSFEDK 287 (374)
Q Consensus 252 i~~~~~~------~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~ 287 (374)
++.++.. ....+||++++ ++++|.++.+.+.+.+..
T Consensus 431 ~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 431 TLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred HHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence 9888432 13689999988 899999999999887643
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.3e-24 Score=179.00 Aligned_cols=183 Identities=25% Similarity=0.270 Sum_probs=145.2
Q ss_pred EEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCccccc
Q 017290 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQ 108 (374)
Q Consensus 29 ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~ 108 (374)
|+|+||||++|+.++++|+++|++|+++.|++++... ..+++++.+|+.|.+.+.++++++|+||++++....
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~----- 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK----- 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT-----
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc-----
Confidence 7999999999999999999999999999999876554 567899999999999999999999999999985321
Q ss_pred CCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHh
Q 017290 109 SNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTK 188 (374)
Q Consensus 109 ~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~ 188 (374)
+...+.++++++++.+++|+|++||.++|....... .... . .....|...|..+|+.++.
T Consensus 74 ---------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~----~~~~---~-~~~~~~~~~~~~~e~~~~~--- 133 (183)
T PF13460_consen 74 ---------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLF----SDED---K-PIFPEYARDKREAEEALRE--- 133 (183)
T ss_dssp ---------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEE----EGGT---C-GGGHHHHHHHHHHHHHHHH---
T ss_pred ---------cccccccccccccccccccceeeeccccCCCCCccc----cccc---c-cchhhhHHHHHHHHHHHHh---
Confidence 277789999999999999999999999998644310 1111 1 1115678888888888754
Q ss_pred hhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhcc
Q 017290 189 DFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS 258 (374)
Q Consensus 189 ~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~ 258 (374)
.+++++++||+.+||+.... ..+ ....+....++|+.+|+|++++.++++
T Consensus 134 -~~~~~~ivrp~~~~~~~~~~------------------~~~-~~~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 134 -SGLNWTIVRPGWIYGNPSRS------------------YRL-IKEGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp -STSEEEEEEESEEEBTTSSS------------------EEE-ESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred -cCCCEEEEECcEeEeCCCcc------------------eeE-EeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 68999999999999985320 001 111334566999999999999998864
|
... |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-23 Score=185.46 Aligned_cols=228 Identities=16% Similarity=0.081 Sum_probs=160.2
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--ccccceeEEecccc-hhhHhhhc-cCCCEEEEcc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--DMFCHEFHLVDLRV-MDNCLKVT-KGVDHVFNLA 98 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~i~~~~~dl~~-~~~~~~~~-~~~d~vi~~a 98 (374)
...+|+||||||+|+||+++++.|+++||+|+++.|++++.... ...+++++.+|+++ .+.+.+.+ .++|+||+++
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~ 93 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICAT 93 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECC
Confidence 34678999999999999999999999999999999987543211 12357889999988 46677777 6899999998
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHH
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA 178 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~ 178 (374)
+.... .+....+..|..++.++++++++.+++|+||+||..+|+..... +..+.. ...++...|...|..
T Consensus 94 g~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~----~~~~~~-~~~~~~~~~~~~k~~ 163 (251)
T PLN00141 94 GFRRS-----FDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQ----ILNPAY-IFLNLFGLTLVAKLQ 163 (251)
T ss_pred CCCcC-----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCccc----ccCcch-hHHHHHHHHHHHHHH
Confidence 75321 12233456788999999999999999999999999999753221 111100 011122334557888
Q ss_pred HHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhcc
Q 017290 179 SEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS 258 (374)
Q Consensus 179 ~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~ 258 (374)
+|+++++ .+++++++||+.+++.... +. +.+.........+++..|+|+++..++..
T Consensus 164 ~e~~l~~----~gi~~~iirpg~~~~~~~~------------------~~-~~~~~~~~~~~~~i~~~dvA~~~~~~~~~ 220 (251)
T PLN00141 164 AEKYIRK----SGINYTIVRPGGLTNDPPT------------------GN-IVMEPEDTLYEGSISRDQVAEVAVEALLC 220 (251)
T ss_pred HHHHHHh----cCCcEEEEECCCccCCCCC------------------ce-EEECCCCccccCcccHHHHHHHHHHHhcC
Confidence 8877665 6899999999999975321 11 11111111123579999999999999887
Q ss_pred CC--CCcEEecC---CCccCHHHHHHHHHH
Q 017290 259 DF--REPVNIGS---DEMVSMNEMAEIVLS 283 (374)
Q Consensus 259 ~~--~~~~~i~~---~~~~s~~e~~~~i~~ 283 (374)
+. ..++.+.+ +...++.+++..+.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 221 PESSYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred hhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 53 56677764 234788888887754
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.8e-23 Score=169.86 Aligned_cols=303 Identities=16% Similarity=0.196 Sum_probs=228.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhC-CC-EEEEEeCC-CCcccccccccceeEEecccchhhHhhhc--cCCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSE-GH-YIIASDWK-KNEHMTEDMFCHEFHLVDLRVMDNCLKVT--KGVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~-g~-~V~~~~r~-~~~~~~~~~~~i~~~~~dl~~~~~~~~~~--~~~d~vi~~a 98 (374)
....+||||||-|.+|..++..|... |. .|+..+-. +..... ..-.++..|+.|.+.+++++ +++|.+||+.
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~---~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfS 118 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT---DVGPYIYLDILDQKSLEEIVVNKRIDWLVHFS 118 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc---ccCCchhhhhhccccHHHhhcccccceeeeHH
Confidence 45689999999999999999998876 54 56655433 222211 12368889999999999987 4899999999
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHH
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA 178 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~ 178 (374)
+..++ .-+.+..-+.++|+.|..|+++.+++++. ++...||.++||...... |-+.-. -..|.+.||.||..
T Consensus 119 ALLSA--vGE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtSPRN---PTPdlt--IQRPRTIYGVSKVH 190 (366)
T KOG2774|consen 119 ALLSA--VGETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTSPRN---PTPDLT--IQRPRTIYGVSKVH 190 (366)
T ss_pred HHHHH--hcccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCCCCC---CCCCee--eecCceeechhHHH
Confidence 98776 44667778889999999999999999998 677789999998754321 111111 23688999999999
Q ss_pred HHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhcc
Q 017290 179 SEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS 258 (374)
Q Consensus 179 ~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~ 258 (374)
+|.+-+.|..++++++.++|.+.++.......+...-....+...+++|+ ...+-.++...++.|..|+-++++.++..
T Consensus 191 AEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk-~tCylrpdtrlpmmy~~dc~~~~~~~~~a 269 (366)
T KOG2774|consen 191 AELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGK-HTCYLRPDTRLPMMYDTDCMASVIQLLAA 269 (366)
T ss_pred HHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCC-cccccCCCccCceeehHHHHHHHHHHHhC
Confidence 99999999999999999999999988754444432222334444555444 44555778889999999999999998877
Q ss_pred C----CCCcEEecCCCccCHHHHHHHHHHhc-CCCCCcccCC--CCCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHH
Q 017290 259 D----FREPVNIGSDEMVSMNEMAEIVLSFE-DKKLPIHHIP--GPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYF 331 (374)
Q Consensus 259 ~----~~~~~~i~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~--~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~ 331 (374)
+ ...+||++ +-..+..|+++.+.+.. |.++.+..-. .-.+.+...+|++.+|+++-|+.++.+..-+.-++.
T Consensus 270 ~~~~lkrr~ynvt-~~sftpee~~~~~~~~~p~~~i~y~~~srq~iad~wp~~~dds~ar~~wh~~h~~~l~~~i~~~i~ 348 (366)
T KOG2774|consen 270 DSQSLKRRTYNVT-GFSFTPEEIADAIRRVMPGFEIDYDICTRQSIADSWPMSLDDSEARTEWHEKHSLHLLSIISTVVA 348 (366)
T ss_pred CHHHhhhheeeec-eeccCHHHHHHHHHhhCCCceeecccchhhhhhhhcccccCchhHhhHHHHhhhhhHHHHHHHHHH
Confidence 6 36899998 59999999999999877 3333322221 123457889999999999999998888777777776
Q ss_pred HHHHhhhh
Q 017290 332 WIKEQIEK 339 (374)
Q Consensus 332 ~~~~~~~~ 339 (374)
-.++....
T Consensus 349 ~~~~n~~~ 356 (366)
T KOG2774|consen 349 VHKSNLKL 356 (366)
T ss_pred HHHhhhhh
Confidence 66655444
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-23 Score=175.27 Aligned_cols=228 Identities=18% Similarity=0.202 Sum_probs=183.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
++-.+-|.|||||+|++++..|.+.|-+|++--|........ .-.++-+...|+.|++.++.+++...+||++.|
T Consensus 60 sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIG 139 (391)
T KOG2865|consen 60 SGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIG 139 (391)
T ss_pred cceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeec
Confidence 445677999999999999999999999999988876532221 122567888999999999999999999999998
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHH
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAS 179 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~ 179 (374)
- .+++..-...++|+.++..|.+.|++.|+.|||++|+... .....+-|-.+|..+
T Consensus 140 r-----d~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga-------------------nv~s~Sr~LrsK~~g 195 (391)
T KOG2865|consen 140 R-----DYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA-------------------NVKSPSRMLRSKAAG 195 (391)
T ss_pred c-----ccccCCcccccccchHHHHHHHHHHhhChhheeehhhccc-------------------cccChHHHHHhhhhh
Confidence 5 3444555677889999999999999999999999999753 123446788999999
Q ss_pred HHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc-cccceeHHHHHHHHHhhhcc
Q 017290 180 EELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ-TRSFTFIDECVEGVLRLTKS 258 (374)
Q Consensus 180 E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~i~~~~~~ 258 (374)
|..+++.. .+.+|+||+.+||..+. ++..+.. ..++-..+++++.|+. ....+|+-|||.+|+.+++.
T Consensus 196 E~aVrdaf----PeAtIirPa~iyG~eDr------fln~ya~-~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkD 264 (391)
T KOG2865|consen 196 EEAVRDAF----PEATIIRPADIYGTEDR------FLNYYAS-FWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKD 264 (391)
T ss_pred HHHHHhhC----Ccceeechhhhcccchh------HHHHHHH-HHHhcCceeeecCCcceeeccEEEehHHHHHHHhccC
Confidence 99999954 46899999999998764 4434332 2333467888887754 45889999999999999998
Q ss_pred C--CCCcEEecCCCccCHHHHHHHHHHhcCC
Q 017290 259 D--FREPVNIGSDEMVSMNEMAEIVLSFEDK 287 (374)
Q Consensus 259 ~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~ 287 (374)
+ .+++|..+++..+.+.|+++.+-+...+
T Consensus 265 p~s~Gktye~vGP~~yql~eLvd~my~~~~~ 295 (391)
T KOG2865|consen 265 PDSMGKTYEFVGPDRYQLSELVDIMYDMARE 295 (391)
T ss_pred ccccCceeeecCCchhhHHHHHHHHHHHHhh
Confidence 7 4899999999999999999998766543
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.9e-23 Score=224.70 Aligned_cols=256 Identities=17% Similarity=0.143 Sum_probs=184.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC----CEEEEEeCCCCccccc----------------ccccceeEEecccc----
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG----HYIIASDWKKNEHMTE----------------DMFCHEFHLVDLRV---- 80 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~----------------~~~~i~~~~~dl~~---- 80 (374)
..++|||||||||+|+++++.|++++ ++|+++.|........ ...+++++.+|+.+
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 45899999999999999999999887 7999999975432110 01257889999974
Q ss_pred --hhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccc-----
Q 017290 81 --MDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLE----- 153 (374)
Q Consensus 81 --~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~----- 153 (374)
.+.+..+.+++|+|||+|+... ...........|+.++.+++++|.+.++++|+|+||.++|+.....+
T Consensus 1050 l~~~~~~~l~~~~d~iiH~Aa~~~----~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~ 1125 (1389)
T TIGR03443 1050 LSDEKWSDLTNEVDVIIHNGALVH----WVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDEL 1125 (1389)
T ss_pred cCHHHHHHHHhcCCEEEECCcEec----CccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhh
Confidence 3455666679999999999753 12234445567999999999999999999999999999997422100
Q ss_pred ---cccCCCCCCCC---CCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhcc
Q 017290 154 ---TNVSLKESDAW---PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTS 226 (374)
Q Consensus 154 ---~~~~~~e~~~~---~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~ 226 (374)
....+.|+.+. ...+.+.|+.+|+.+|.++..+.+. +++++++||+.|||+...... ....+..++......
T Consensus 1126 ~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~ 1204 (1389)
T TIGR03443 1126 VQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKR-GLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQL 1204 (1389)
T ss_pred hhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhC-CCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHh
Confidence 01124444321 1234567999999999999988764 899999999999998643221 223344444333221
Q ss_pred CCceEeeCCCcccccceeHHHHHHHHHhhhccCC----CCcEEecCCCccCHHHHHHHHHHhcCCCCC
Q 017290 227 TDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF----REPVNIGSDEMVSMNEMAEIVLSFEDKKLP 290 (374)
Q Consensus 227 ~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 290 (374)
..+.+....+++++++|++++++.++.++. ..+||++++..+++.++++.+.+. |.+.+
T Consensus 1205 ----~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~ 1267 (1389)
T TIGR03443 1205 ----GLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDVE 1267 (1389)
T ss_pred ----CCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCC
Confidence 122344557899999999999999987652 357999999999999999999765 55443
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-23 Score=185.77 Aligned_cols=248 Identities=16% Similarity=0.106 Sum_probs=175.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCccc----------------ccccccceeEEecccc------hhh
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHM----------------TEDMFCHEFHLVDLRV------MDN 83 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~----------------~~~~~~i~~~~~dl~~------~~~ 83 (374)
++||+||||||+|.+++++|+.+- .+|+|+.|..+... +.....++++.+|+.. ..+
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 579999999999999999999975 59999999877211 1233478999999983 446
Q ss_pred HhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 84 CLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 84 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+..+.+.+|.|||+|+.+. +-.++......|+.|+..+++.|.....|.+.|+||.+|+............+++++
T Consensus 81 ~~~La~~vD~I~H~gA~Vn----~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~ 156 (382)
T COG3320 81 WQELAENVDLIIHNAALVN----HVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISP 156 (382)
T ss_pred HHHHhhhcceEEecchhhc----ccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccc
Confidence 6677778999999999774 234667788899999999999999999989999999999876543211112222221
Q ss_pred C---CCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCC-CCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 164 W---PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGT-WKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 164 ~---~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
. ...+.++|++||+.+|.+++..... |++++|+|||.|.|...+ ..+...++.+++..+++-+. ++ .....
T Consensus 157 ~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~-~P---~~~~~ 231 (382)
T COG3320 157 TRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGI-AP---DSEYS 231 (382)
T ss_pred cccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCC-CC---Ccccc
Confidence 1 2245689999999999999998887 999999999999998762 23356677788877766443 11 11111
Q ss_pred ccceeH-----------HHHHHHHHhhhccC--CCCcEE-ecCCCccCHHHHHHHHHH
Q 017290 240 RSFTFI-----------DECVEGVLRLTKSD--FREPVN-IGSDEMVSMNEMAEIVLS 283 (374)
Q Consensus 240 ~~~i~~-----------~Dva~~i~~~~~~~--~~~~~~-i~~~~~~s~~e~~~~i~~ 283 (374)
.+.+.+ .-+++++..+..++ .-..|+ ..-|..+...++.+.+.+
T Consensus 232 ~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 232 LDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred hhhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence 222222 22333444444322 123333 344788999999998887
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-22 Score=181.22 Aligned_cols=234 Identities=16% Similarity=0.072 Sum_probs=168.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCCEEE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVDHVF 95 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi 95 (374)
.|++|||||+|+||++++++|+++|++|+++.|+....... ...++.++.+|++|.+.+.++++ ++|+||
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV 81 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 47899999999999999999999999999999986432211 12256888999999988776653 589999
Q ss_pred EcccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 96 NLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 96 ~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
|+|+....... ...+.+..+++|+.++.++++++ ++.+.+++|++||..... +..+
T Consensus 82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------------~~~~ 144 (276)
T PRK06482 82 SNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI-----------------AYPG 144 (276)
T ss_pred ECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc-----------------CCCC
Confidence 99997532111 12233456779999999999987 556677999999965421 1224
Q ss_pred CCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcc---cCCCCCCCC----CCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 169 QDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNI---YGPFGTWKG----MEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v---~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
.+.|+.+|...|.+++.++.+ .+++++++||+.+ ||++..... ....+...+...+..+ .
T Consensus 145 ~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------- 214 (276)
T PRK06482 145 FSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADG-S--------- 214 (276)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhc-c---------
Confidence 578999999999999998765 5899999999988 554321110 1112222233333211 1
Q ss_pred cccceeHHHHHHHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcC
Q 017290 239 TRSFTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFED 286 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g 286 (374)
...+.+++|++++++.++..+ .+..||+++++..+..|+++.+.+.++
T Consensus 215 ~~~~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 215 FAIPGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred CCCCCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence 112457899999999999875 467799999999999888887776664
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.6e-23 Score=180.29 Aligned_cols=223 Identities=22% Similarity=0.201 Sum_probs=164.3
Q ss_pred EEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc--ccccccceeEEecccchhhHhhhccCCCEEEEcccccCCccc
Q 017290 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM--TEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGF 106 (374)
Q Consensus 29 ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~ 106 (374)
|+|+||||.+|+++++.|++.+++|+++.|+++... .....+++++.+|+.|.+.+.++++++|.||.+.+...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~---- 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH---- 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC----
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcch----
Confidence 799999999999999999999999999999985322 22345789999999999999999999999998887431
Q ss_pred ccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHH
Q 017290 107 IQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHY 186 (374)
Q Consensus 107 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~ 186 (374)
...+....++++||+++|++|||+.|-...+... . ...|.......|..+|+.+++
T Consensus 77 ---------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~------------~--~~~p~~~~~~~k~~ie~~l~~- 132 (233)
T PF05368_consen 77 ---------PSELEQQKNLIDAAKAAGVKHFVPSSFGADYDES------------S--GSEPEIPHFDQKAEIEEYLRE- 132 (233)
T ss_dssp ---------CCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTT------------T--TSTTHHHHHHHHHHHHHHHHH-
T ss_pred ---------hhhhhhhhhHHHhhhccccceEEEEEeccccccc------------c--cccccchhhhhhhhhhhhhhh-
Confidence 2256778999999999999999976665443211 0 122334455678888877776
Q ss_pred HhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHH-HhccC-CceEeeCCCcccccce-eHHHHHHHHHhhhccCC---
Q 017290 187 TKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRK-ALTST-DKFEMWGDGLQTRSFT-FIDECVEGVLRLTKSDF--- 260 (374)
Q Consensus 187 ~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~i-~~~Dva~~i~~~~~~~~--- 260 (374)
.+++++++|++.++... +..+... ..... ..+.++++++....++ +.+|+++++..++.++.
T Consensus 133 ---~~i~~t~i~~g~f~e~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~ 200 (233)
T PF05368_consen 133 ---SGIPYTIIRPGFFMENL---------LPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHN 200 (233)
T ss_dssp ---CTSEBEEEEE-EEHHHH---------HTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTT
T ss_pred ---ccccceeccccchhhhh---------hhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhc
Confidence 69999999999888542 1111110 11112 2467777777667775 99999999999998862
Q ss_pred -CCcEEecCCCccCHHHHHHHHHHhcCCCCCcc
Q 017290 261 -REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIH 292 (374)
Q Consensus 261 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~ 292 (374)
+..+.+++ +.+|+.|+++.+.+.+|++++++
T Consensus 201 ~~~~~~~~~-~~~t~~eia~~~s~~~G~~v~y~ 232 (233)
T PF05368_consen 201 NGKTIFLAG-ETLTYNEIAAILSKVLGKKVKYV 232 (233)
T ss_dssp EEEEEEEGG-GEEEHHHHHHHHHHHHTSEEEEE
T ss_pred CCEEEEeCC-CCCCHHHHHHHHHHHHCCccEEe
Confidence 45666664 88999999999999999986543
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-21 Score=185.47 Aligned_cols=224 Identities=14% Similarity=0.047 Sum_probs=159.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---------------ccccceeEEecccchhhHhhhcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---------------DMFCHEFHLVDLRVMDNCLKVTK 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------------~~~~i~~~~~dl~~~~~~~~~~~ 89 (374)
++++||||||+|+||++++++|++.|++|++++|+..+.... ...+++++.+|+.+.+.+..++.
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg 158 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG 158 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc
Confidence 568899999999999999999999999999999986543211 01246789999999999999999
Q ss_pred CCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
++|+|||++|.... ...+....+.+|+.++.+++++|++.+++|||++||.+++... .... .....
T Consensus 159 giDiVVn~AG~~~~---~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g--------~p~~---~~~sk 224 (576)
T PLN03209 159 NASVVICCIGASEK---EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG--------FPAA---ILNLF 224 (576)
T ss_pred CCCEEEEccccccc---cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC--------cccc---chhhH
Confidence 99999999985421 1112344577899999999999999999999999998763211 1110 11233
Q ss_pred CchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHH
Q 017290 170 DAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 249 (374)
..|...|..+|..+.. .|+++++||||.++++.+.... ...+.....+...-..+...|||
T Consensus 225 ~~~~~~KraaE~~L~~----sGIrvTIVRPG~L~tp~d~~~~---------------t~~v~~~~~d~~~gr~isreDVA 285 (576)
T PLN03209 225 WGVLCWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNLTLSEEDTLFGGQVSNLQVA 285 (576)
T ss_pred HHHHHHHHHHHHHHHH----cCCCEEEEECCeecCCcccccc---------------ccceeeccccccCCCccCHHHHH
Confidence 5577788888888765 6899999999999877432100 01111111111122458899999
Q ss_pred HHHHhhhccC---CCCcEEecCCCc---cCHHHHHHHH
Q 017290 250 EGVLRLTKSD---FREPVNIGSDEM---VSMNEMAEIV 281 (374)
Q Consensus 250 ~~i~~~~~~~---~~~~~~i~~~~~---~s~~e~~~~i 281 (374)
++++.++.++ .+.+|.+.++.. ..+.++++.+
T Consensus 286 ~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~i 323 (576)
T PLN03209 286 ELMACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAKI 323 (576)
T ss_pred HHHHHHHcCchhccceEEEEEeCCCCCCCCHHHHHHhc
Confidence 9999999865 378888887653 4444544443
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.7e-21 Score=171.55 Aligned_cols=224 Identities=14% Similarity=0.002 Sum_probs=154.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
+++++|||||+|+||+++++.|+++|++|++++|++...... ....+.++.+|+++.+.+.++++ ++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 468899999999999999999999999999999987432211 11235678999999888876654 48
Q ss_pred CEEEEcccccCCccc---ccCCcceehhhhHHH----HHHHHHHH-HhCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 92 DHVFNLAADMGGMGF---IQSNHSVIMYNNTMI----SFNMLEAS-RISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 92 d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~----~~~ll~a~-~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
|+||||++....... .....+..+++|+.+ +..+++++ ++.+.+++|++||...+.
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~---------------- 149 (262)
T PRK13394 86 DILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE---------------- 149 (262)
T ss_pred CEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC----------------
Confidence 999999997532111 112234456788888 66667777 666778999999965432
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhcc--CCceEeeCCCcc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTS--TDKFEMWGDGLQ 238 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 238 (374)
...+...|+.+|...+.+++.++.+ .+++++++||+.++++... ..+.......... .....+++.+..
T Consensus 150 -~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (262)
T PRK13394 150 -ASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVD-----KQIPEQAKELGISEEEVVKKVMLGKTV 223 (262)
T ss_pred -CCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhh-----hhhHhhhhccCCChHHHHHHHHhcCCC
Confidence 1224468999999999999888765 4799999999999987421 0111110000000 000001223344
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
..++++++|++++++.++... .+..|+++++.
T Consensus 224 ~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~ 259 (262)
T PRK13394 224 DGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGW 259 (262)
T ss_pred CCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence 578999999999999998764 25678887654
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-20 Score=166.45 Aligned_cols=218 Identities=13% Similarity=0.067 Sum_probs=151.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc--------cccccceeEEecccchhhHhhhcc-------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT--------EDMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
+.++||||||+|+||+++++.|+++|++|++++|+...... .....+.++.+|+++.+.+..+++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45789999999999999999999999999999987432110 011236788999999888877765
Q ss_pred CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHhC---CCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRIS---GVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~~---~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
++|+|||+|+......+.. .+.+..++.|+.++.++++++... ...+++++|+... ..
T Consensus 85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~---------------~~- 148 (249)
T PRK09135 85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHA---------------ER- 148 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhh---------------cC-
Confidence 5799999999643211111 234557889999999999988642 1125666554211 11
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhhh--CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKDF--GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
+..+...|+.+|...|.+++.++.+. +++++++||+.++++.... .+.......... ...+ ..
T Consensus 149 -~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~----~~~~~~~~~~~~-~~~~---------~~ 213 (249)
T PRK09135 149 -PLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGN----SFDEEARQAILA-RTPL---------KR 213 (249)
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccc----cCCHHHHHHHHh-cCCc---------CC
Confidence 44567899999999999999998765 5899999999999986421 112222222221 1111 12
Q ss_pred ceeHHHHHHHHHhhhcc-C--CCCcEEecCCCccC
Q 017290 242 FTFIDECVEGVLRLTKS-D--FREPVNIGSDEMVS 273 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~-~--~~~~~~i~~~~~~s 273 (374)
+.+++|+|++++.++.. . .+.+|+++++..++
T Consensus 214 ~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 214 IGTPEDIAEAVRFLLADASFITGQILAVDGGRSLT 248 (249)
T ss_pred CcCHHHHHHHHHHHcCccccccCcEEEECCCeecc
Confidence 33589999999655543 2 47889999887654
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-20 Score=168.14 Aligned_cols=220 Identities=18% Similarity=0.105 Sum_probs=152.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhh-------ccCCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKV-------TKGVD 92 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~-------~~~~d 92 (374)
++++|||||+|+||+++++.|+++|++|++++|++...... ....+.++.+|+.+.+.+..+ +.++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 46899999999999999999999999999999986532211 112467889999998855443 44689
Q ss_pred EEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
+|||+++........ ..+.+..+..|+.++..+++++ ++.+.+++||+||...+...
T Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~---------------- 144 (255)
T TIGR01963 81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVAS---------------- 144 (255)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCC----------------
Confidence 999999865321111 1123445678888877777766 56677899999997654321
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhcc-CCce-----EeeCCC
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTS-TDKF-----EMWGDG 236 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~ 236 (374)
.....|+.+|...+.+++.++.+ .+++++++||+.++++... ..+...... .... .....+
T Consensus 145 -~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
T TIGR01963 145 -PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVE---------KQIADQAKTRGIPEEQVIREVMLPG 214 (255)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHH---------HHHHhhhcccCCCchHHHHHHHHcc
Confidence 12368999999999999887654 3799999999999987411 111111100 0000 001123
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
.+.+++++++|+|++++.++.+. .++.|+++++..
T Consensus 215 ~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~~ 253 (255)
T TIGR01963 215 QPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGGWT 253 (255)
T ss_pred CccccCcCHHHHHHHHHHHcCccccCccceEEEEcCccc
Confidence 45568999999999999999763 367799887643
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-20 Score=165.31 Aligned_cols=216 Identities=16% Similarity=0.063 Sum_probs=156.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
++|+||||||+|+||+++++.|+++|++|+++.|+...... ....++.++.+|+.+.+.+.++++ +
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 45799999999999999999999999999887776543211 112246788999999988877653 6
Q ss_pred CCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+|+|||+++....... ........+..|+.+..++++++ ++.+.+++|++||...+..
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~--------------- 149 (249)
T PRK12825 85 IDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPG--------------- 149 (249)
T ss_pred CCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCC---------------
Confidence 7999999996432111 22233556788999988888876 5667789999999877532
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
......|+.+|...+.+++.++.+ .+++++++||+.++++.... ......... .. .....
T Consensus 150 --~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~----~~~~~~~~~----~~-------~~~~~ 212 (249)
T PRK12825 150 --WPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEA----TIEEAREAK----DA-------ETPLG 212 (249)
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccc----ccchhHHhh----hc-------cCCCC
Confidence 123468999999999999888765 58999999999999986321 111111111 00 11123
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
.+++.+|+++++..++++. .+.+|+++++..+
T Consensus 213 ~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~~ 248 (249)
T PRK12825 213 RSGTPEDIARAVAFLCSDASDYITGQVIEVTGGVDV 248 (249)
T ss_pred CCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence 3899999999999999764 3788999887543
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.5e-21 Score=171.63 Aligned_cols=233 Identities=15% Similarity=0.105 Sum_probs=163.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc----c----cccceeEEecccchhhHhhhcc------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE----D----MFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~----~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+.++++|||||+|+||+++++.|+++|++|++++|+....... . ...+.++.+|+.+.+.+..+++
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4568999999999999999999999999999999876432111 0 1245778899999888877665
Q ss_pred -CCCEEEEcccccCCc-cccc---CCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 -GVDHVFNLAADMGGM-GFIQ---SNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~-~~~~---~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+++..... .+.. .+....+.+|+.++..+++++.+ .+..++|++||...+..
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~------------ 152 (276)
T PRK05875 85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT------------ 152 (276)
T ss_pred CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCC------------
Confidence 689999999854211 1111 12345677899999888876654 33348999999876431
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
..+.+.|+.+|...|.+++.++.+. +++++++||+.+.++..... . .......... ...
T Consensus 153 -----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~--~-~~~~~~~~~~----------~~~ 214 (276)
T PRK05875 153 -----HRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPI--T-ESPELSADYR----------ACT 214 (276)
T ss_pred -----CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccc--c-cCHHHHHHHH----------cCC
Confidence 2245789999999999999987654 58999999999876532110 0 0001111111 011
Q ss_pred ccccceeHHHHHHHHHhhhccCC----CCcEEecCCCcc----CHHHHHHHHHHhcC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSDF----REPVNIGSDEMV----SMNEMAEIVLSFED 286 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~~----~~~~~i~~~~~~----s~~e~~~~i~~~~g 286 (374)
....+++++|+|+++..++..+. +.+++++++..+ +..|+++.+.+..+
T Consensus 215 ~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 271 (276)
T PRK05875 215 PLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADG 271 (276)
T ss_pred CCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHH
Confidence 22346789999999999998753 678999988776 77777777765544
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.9e-20 Score=164.39 Aligned_cols=217 Identities=16% Similarity=0.068 Sum_probs=155.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
++|+||||||+|+||.++++.|+++|++|++++|+..+.... ....+.++.+|+.|.+.+.++++ ++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 568999999999999999999999999999999985432111 11236788999999988887764 68
Q ss_pred CEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|+|||+++...... ....+....+..|+.++..+++++ .+.+.+++|++||...+..
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~---------------- 148 (251)
T PRK12826 85 DILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV---------------- 148 (251)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc----------------
Confidence 99999998754211 112234556888999998888876 3455679999999866511
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
+......|+.+|..++.+++.+..+ .+++++++||+.++++..... ....+...+... .....
T Consensus 149 ~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~-----~~~~~~~~~~~~---------~~~~~ 214 (251)
T PRK12826 149 GYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNL-----GDAQWAEAIAAA---------IPLGR 214 (251)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhc-----CchHHHHHHHhc---------CCCCC
Confidence 2233467999999999999988665 479999999999999853211 111101111111 11125
Q ss_pred ceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 242 FTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+++++|+|++++.++... .+++|++.++..
T Consensus 215 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~ 248 (251)
T PRK12826 215 LGEPEDIAAAVLFLASDEARYITGQTLPVDGGAT 248 (251)
T ss_pred CcCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence 789999999999988764 378889887654
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.2e-20 Score=168.40 Aligned_cols=236 Identities=14% Similarity=0.052 Sum_probs=164.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
++++||||||+|+||+++++.|+++|++|++++|++...... ....+.++.+|+++.+.+..+++ ++|+|
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 457899999999999999999999999999999986542211 11246778899999888766654 67999
Q ss_pred EEcccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 95 FNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 95 i~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
||||+....... ...+....+++|+.++..+++++ ++.+.+++|++||...+... .
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------------~ 144 (275)
T PRK08263 82 VNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAF-----------------P 144 (275)
T ss_pred EECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCC-----------------C
Confidence 999997532111 22344566889999987777765 55666799999997665421 2
Q ss_pred CCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCC--C--CcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 168 PQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGM--E--KAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
....|+.+|...+.+++.++.+ .+++++++||+.+..+....... . ......... + .......
T Consensus 145 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~ 214 (275)
T PRK08263 145 MSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREE-L---------AEQWSER 214 (275)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHH-H---------HHHHHhc
Confidence 3467999999999999888765 68999999999887654311000 0 000111011 1 0111122
Q ss_pred cc-eeHHHHHHHHHhhhccCC-CCcEEec-CCCccCHHHHHHHHHHhcCC
Q 017290 241 SF-TFIDECVEGVLRLTKSDF-REPVNIG-SDEMVSMNEMAEIVLSFEDK 287 (374)
Q Consensus 241 ~~-i~~~Dva~~i~~~~~~~~-~~~~~i~-~~~~~s~~e~~~~i~~~~g~ 287 (374)
.+ ++.+|++++++.+++.+. ...|+++ .++.+++.++.+.+.+..+.
T Consensus 215 ~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (275)
T PRK08263 215 SVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWEEW 264 (275)
T ss_pred cCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHHHH
Confidence 34 889999999999998763 4345554 44689999999999886543
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.8e-20 Score=165.23 Aligned_cols=219 Identities=15% Similarity=0.008 Sum_probs=151.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
.+++||||||+|+||++++++|+++|++|++++|++...... ...++.++.+|+.+.+.+.++++ ++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 458999999999999999999999999999999986542211 11246788999999998877664 68
Q ss_pred CEEEEcccccCCccc---ccCCcceehhhhHHHH----HHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGF---IQSNHSVIMYNNTMIS----FNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~----~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|+|||+++....... +....+..++.|+.++ ..++.++++.+.++||++||...+..
T Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~---------------- 146 (258)
T PRK12429 83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG---------------- 146 (258)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC----------------
Confidence 999999986432111 1122334566788874 44555556667789999999755431
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhcc-CCce-----EeeCC
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTS-TDKF-----EMWGD 235 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~ 235 (374)
..+.+.|+.+|...+.+++.++.+ .++.+.++||+.++++.... .+...... +.+. ..+..
T Consensus 147 -~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 216 (258)
T PRK12429 147 -SAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRK---------QIPDLAKERGISEEEVLEDVLLP 216 (258)
T ss_pred -CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhh---------hhhhhccccCCChHHHHHHHHhc
Confidence 234578999999999998888654 36999999999999875310 11111000 0000 01112
Q ss_pred CcccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
....+.+++++|+|++++.++... .+..|+++++
T Consensus 217 ~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 254 (258)
T PRK12429 217 LVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGG 254 (258)
T ss_pred cCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence 223457999999999999988753 2677888765
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.1e-20 Score=164.93 Aligned_cols=225 Identities=13% Similarity=0.017 Sum_probs=150.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
.+++||||||+|+||++++++|+++|++|++++|++...... ....+.++.+|+++.+.+..+++ ++|+|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 457899999999999999999999999999999986542211 11246778899999888877665 58999
Q ss_pred EEcccccCCccccc---CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 95 FNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 95 i~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
||+|+......... ......+++|+.++.++++++ ++.+..++|++||...+.. ..
T Consensus 83 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~-----------------~~ 145 (277)
T PRK06180 83 VNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLIT-----------------MP 145 (277)
T ss_pred EECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCC-----------------CC
Confidence 99999753211111 123445889999999998875 3445569999999765431 22
Q ss_pred CCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCC--CCCcHHHHHHHHhccCCceEeeCCCcccccc
Q 017290 168 PQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKG--MEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (374)
+...|+.+|...|.+++.++.+ .+++++++||+.+.++...... .......+...... ........ ....+
T Consensus 146 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~ 221 (277)
T PRK06180 146 GIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGP-IRQAREAK---SGKQP 221 (277)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHH-HHHHHHhh---ccCCC
Confidence 4578999999999999888765 4899999999999876422110 00111111110000 00000001 12345
Q ss_pred eeHHHHHHHHHhhhccCCCCcEEecCCC
Q 017290 243 TFIDECVEGVLRLTKSDFREPVNIGSDE 270 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~~~~~~~i~~~~ 270 (374)
...+|+|++++.+++.+....+++.+++
T Consensus 222 ~~~~dva~~~~~~l~~~~~~~~~~~g~~ 249 (277)
T PRK06180 222 GDPAKAAQAILAAVESDEPPLHLLLGSD 249 (277)
T ss_pred CCHHHHHHHHHHHHcCCCCCeeEeccHH
Confidence 6899999999999988754443443333
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=162.91 Aligned_cols=219 Identities=12% Similarity=0.067 Sum_probs=151.7
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
...++.++||||+|+||+++++.|+++|++|+++.|+....... ....+.++.+|+++.+.+..+++
T Consensus 7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 34668999999999999999999999999999999875432111 01245678899999998876664
Q ss_pred CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|+|||+|+......... ......+.+|+.++.++++++. +.+..+||++||...|...
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~------------- 153 (274)
T PRK07775 87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR------------- 153 (274)
T ss_pred CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC-------------
Confidence 6799999998653211111 2234456889999998888764 3445589999998765421
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
.+...|+.+|...|.+++.++.+. +++++++|||.+..+..... .......++..... ++ ....
T Consensus 154 ----~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~-~~~~~~~~~~~~~~-------~~-~~~~ 220 (274)
T PRK07775 154 ----PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSL-PAEVIGPMLEDWAK-------WG-QARH 220 (274)
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccC-ChhhhhHHHHHHHH-------hc-cccc
Confidence 234579999999999999998654 89999999998865421110 01111112221111 01 1224
Q ss_pred ccceeHHHHHHHHHhhhccCC-CCcEEec
Q 017290 240 RSFTFIDECVEGVLRLTKSDF-REPVNIG 267 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~~-~~~~~i~ 267 (374)
+.++|++|+|++++.+++++. +.+||+.
T Consensus 221 ~~~~~~~dva~a~~~~~~~~~~~~~~~~~ 249 (274)
T PRK07775 221 DYFLRASDLARAITFVAETPRGAHVVNME 249 (274)
T ss_pred ccccCHHHHHHHHHHHhcCCCCCCeeEEe
Confidence 568999999999999998764 4567775
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.6e-20 Score=162.79 Aligned_cols=220 Identities=15% Similarity=0.028 Sum_probs=152.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
+.+++|||||+|+||+++++.|++.|++|++++|+...... .....+.++.+|+++.+.+..+++ +
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 45899999999999999999999999999999987542111 001235778899999988876664 6
Q ss_pred CCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
+|+|||+|+... ....++...+++|+.++.++++++.+.- ..++|++||....... ..+ +...
T Consensus 85 ~d~vi~~ag~~~---~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~--------~~~----~~~~ 149 (248)
T PRK07806 85 LDALVLNASGGM---ESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIP--------TVK----TMPE 149 (248)
T ss_pred CcEEEECCCCCC---CCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCc--------ccc----CCcc
Confidence 899999998532 2223456678899999999999987642 2489999995442110 001 1112
Q ss_pred CCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeH
Q 017290 169 QDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
...|+.+|..+|.+++.++.+ .++++++++|+.+-++.. ..++.. ..+-.+.........++++
T Consensus 150 ~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~---------~~~~~~----~~~~~~~~~~~~~~~~~~~ 216 (248)
T PRK07806 150 YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVT---------ATLLNR----LNPGAIEARREAAGKLYTV 216 (248)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchh---------hhhhcc----CCHHHHHHHHhhhcccCCH
Confidence 468999999999999998754 468899998887765421 111100 0000000000112368999
Q ss_pred HHHHHHHHhhhccC--CCCcEEecCCCcc
Q 017290 246 DECVEGVLRLTKSD--FREPVNIGSDEMV 272 (374)
Q Consensus 246 ~Dva~~i~~~~~~~--~~~~~~i~~~~~~ 272 (374)
+|+|++++.+++.. .+.+|++++++.+
T Consensus 217 ~dva~~~~~l~~~~~~~g~~~~i~~~~~~ 245 (248)
T PRK07806 217 SEFAAEVARAVTAPVPSGHIEYVGGADYF 245 (248)
T ss_pred HHHHHHHHHHhhccccCccEEEecCccce
Confidence 99999999999876 4788999987654
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=160.84 Aligned_cols=216 Identities=20% Similarity=0.160 Sum_probs=154.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
.++++++||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|+++.+.+..+++ +
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4568999999999999999999999999999999986432111 11135678899999887766554 6
Q ss_pred CCEEEEcccccCCc---cccc---CCcceehhhhHHHHHHHHHHHHhC----CCCeEEEeecccccCCCcccccccCCCC
Q 017290 91 VDHVFNLAADMGGM---GFIQ---SNHSVIMYNNTMISFNMLEASRIS----GVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 91 ~d~vi~~a~~~~~~---~~~~---~~~~~~~~~n~~~~~~ll~a~~~~----~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
+|+|||+|+..... ...+ ...+..+.+|+.++.++++++... +.+++|++||...|.
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------- 150 (250)
T PRK07774 84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL------------- 150 (250)
T ss_pred CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC-------------
Confidence 89999999964311 0111 223446789999999988887643 345999999987653
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+.+.|+.+|...|.+++.++.+. ++.+++++||.+..+.... .....+...... +.+
T Consensus 151 -------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~----~~~~~~~~~~~~-~~~-------- 210 (250)
T PRK07774 151 -------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRT----VTPKEFVADMVK-GIP-------- 210 (250)
T ss_pred -------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccc----cCCHHHHHHHHh-cCC--------
Confidence 23579999999999999998764 6999999999988765321 111222222221 111
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
...+.+++|++++++.++... .+++|++.++..++
T Consensus 211 -~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~~ 249 (250)
T PRK07774 211 -LSRMGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQIIR 249 (250)
T ss_pred -CCCCcCHHHHHHHHHHHhChhhhCcCCCEEEECCCeecc
Confidence 112457899999999988763 46789999877654
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.2e-20 Score=164.37 Aligned_cols=228 Identities=16% Similarity=0.058 Sum_probs=161.6
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc----ccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE----DMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
++++|||||+|+||+++++.|+++|++|++++|++...... ...++.++.+|+.+.+.+..+++ ++|+|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46899999999999999999999999999999986542211 11246788999999998876664 58999
Q ss_pred EEcccccCCcccccCC---cceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 95 FNLAADMGGMGFIQSN---HSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~---~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
||+++..........+ ....+.+|+.+...+++++ .+.+..++|++||...+.. .
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------------~ 143 (257)
T PRK07074 82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA------------------L 143 (257)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC------------------C
Confidence 9999965422121112 2234568888888887766 3455568999999644211 0
Q ss_pred CCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccccee
Q 017290 168 PQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
....|+.+|...+.+++.++.+. ++++.++||+.++++..... ......+...... .....++++
T Consensus 144 ~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~----------~~~~~~~~~ 211 (257)
T PRK07074 144 GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEAR--VAANPQVFEELKK----------WYPLQDFAT 211 (257)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcc--cccChHHHHHHHh----------cCCCCCCCC
Confidence 12379999999999999998654 69999999999988742110 0001122221111 122457899
Q ss_pred HHHHHHHHHhhhccC----CCCcEEecCCCccCHHHHHHHHHH
Q 017290 245 IDECVEGVLRLTKSD----FREPVNIGSDEMVSMNEMAEIVLS 283 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s~~e~~~~i~~ 283 (374)
++|++++++.++... .+.++++.++......|+++.+..
T Consensus 212 ~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 212 PDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTL 254 (257)
T ss_pred HHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence 999999999999653 367778888899999999987753
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=160.06 Aligned_cols=217 Identities=15% Similarity=0.068 Sum_probs=154.0
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
.+++|+||||||+|+||+++++.|+++|++|++++|++...... ....+.++.+|+.+.+.+.++++
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 34558999999999999999999999999999999986542211 11246678899999887776664
Q ss_pred CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|+|||+++...... ....+....++.|+.+..++++++. +.+.+++|++||.....
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~--------------- 146 (246)
T PRK05653 82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT--------------- 146 (246)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc---------------
Confidence 4699999998654211 1112234457789999888887774 56677999999964421
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+..+...|+.+|...|.+++.++++ .+++++++||+.++++... .+...+...... ....
T Consensus 147 --~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~------~~~~~~~~~~~~---------~~~~ 209 (246)
T PRK05653 147 --GNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE------GLPEEVKAEILK---------EIPL 209 (246)
T ss_pred --CCCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh------hhhHHHHHHHHh---------cCCC
Confidence 1234467999999999999888764 4799999999999987532 111222211110 1112
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
..+++.+|+++++..++... .+..|+++++..
T Consensus 210 ~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~ 245 (246)
T PRK05653 210 GRLGQPEEVANAVAFLASDAASYITGQVIPVNGGMY 245 (246)
T ss_pred CCCcCHHHHHHHHHHHcCchhcCccCCEEEeCCCee
Confidence 45789999999999998653 367888887653
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.6e-20 Score=162.08 Aligned_cols=220 Identities=17% Similarity=0.097 Sum_probs=150.2
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-----cccceeEEecccchhhHhhhcc-------CC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-----MFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
.++++++||||+|+||++++++|+++|++|+++.|+........ ...+.++.+|++|.+.+.++++ ++
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 45689999999999999999999999999999998864322111 1236788999999988877654 78
Q ss_pred CEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|+|||+++......... .+.+..+..|+.++..+.+++ ++.+.+++|++||...+..
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~---------------- 146 (252)
T PRK06138 83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAG---------------- 146 (252)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccC----------------
Confidence 99999999754221122 223445788998886665544 5566779999999755321
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
......|+.+|...+.+++.++.+. +++++++||+.++++..............+..... .......
T Consensus 147 -~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 216 (252)
T PRK06138 147 -GRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALR---------ARHPMNR 216 (252)
T ss_pred -CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHH---------hcCCCCC
Confidence 1234679999999999999987654 79999999999988742210000000111111111 0011223
Q ss_pred ceeHHHHHHHHHhhhccCC----CCcEEecCC
Q 017290 242 FTFIDECVEGVLRLTKSDF----REPVNIGSD 269 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~~----~~~~~i~~~ 269 (374)
+++.+|++++++.++.++. +..+.+.++
T Consensus 217 ~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 248 (252)
T PRK06138 217 FGTAEEVAQAALFLASDESSFATGTTLVVDGG 248 (252)
T ss_pred CcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence 7899999999999988753 455666543
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-19 Score=163.92 Aligned_cols=226 Identities=15% Similarity=0.052 Sum_probs=153.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhh---h---ccC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLK---V---TKG 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~---~---~~~ 90 (374)
+++.+|||||+|+||+++++.|+++|++|++++|+++..... ....+.++.+|++|.+.+.. + +.+
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 457899999999999999999999999999999986532111 01246788999999887664 1 236
Q ss_pred CCEEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+|+||||++........ ..+....+..|+.++..+++++ ++.+..++|++||...+.
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~---------------- 145 (280)
T PRK06914 82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRV---------------- 145 (280)
T ss_pred eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccC----------------
Confidence 79999999865421111 1223445778998888887764 556667999999964421
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHH---hhhCCcEEEEeeCcccCCCCCCCC--------CCCcHHHHHHHHhccCCceEe
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYT---KDFGIECRVGRFHNIYGPFGTWKG--------MEKAPAAFCRKALTSTDKFEM 232 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~v~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 232 (374)
...+...|+.+|...+.+++.++ ...+++++++|||.++.+...... ........+..... .
T Consensus 146 -~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 218 (280)
T PRK06914 146 -GFPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQK------H 218 (280)
T ss_pred -CCCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHH------H
Confidence 12345689999999999998886 345899999999999887321100 00011111111110 0
Q ss_pred eCCCcccccceeHHHHHHHHHhhhccCC-CCcEEecCCCccCHH
Q 017290 233 WGDGLQTRSFTFIDECVEGVLRLTKSDF-REPVNIGSDEMVSMN 275 (374)
Q Consensus 233 ~~~~~~~~~~i~~~Dva~~i~~~~~~~~-~~~~~i~~~~~~s~~ 275 (374)
. ......+++++|+|.+++.+++++. ...|+++++..+++.
T Consensus 219 ~--~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (280)
T PRK06914 219 I--NSGSDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMIL 260 (280)
T ss_pred H--hhhhhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHHH
Confidence 0 0123457899999999999999874 456888866655554
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.5e-20 Score=165.47 Aligned_cols=227 Identities=17% Similarity=0.114 Sum_probs=158.2
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
.+++++|||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|+++.+.+..+++ ++|+
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3457899999999999999999999999999999986542211 11246788999999888877664 6899
Q ss_pred EEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhC----C-CCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 94 VFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRIS----G-VKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 94 vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~----~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
+||+++....... ...+.+..+.+|+.++..+++++... + ..++|++||..... +
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------------~ 146 (257)
T PRK07067 84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR-----------------G 146 (257)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC-----------------C
Confidence 9999986532111 12334556889999999999887542 1 23799999953211 1
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhc--cCCceEeeCCCcccc
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALT--STDKFEMWGDGLQTR 240 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 240 (374)
..+...|+.+|...+.+++.++.+ .++++++++|+.++++.... . ...+..... .+.....++...+..
T Consensus 147 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (257)
T PRK07067 147 EALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQ-----V-DALFARYENRPPGEKKRLVGEAVPLG 220 (257)
T ss_pred CCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhh-----h-hhhhhhccCCCHHHHHHHHhhcCCCC
Confidence 234578999999999999888764 57999999999999874211 0 000000000 000001122334456
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
++++.+|+|++++.++... .+.+|++.+++.++
T Consensus 221 ~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~~ 257 (257)
T PRK07067 221 RMGVPDDLTGMALFLASADADYIVAQTYNVDGGNWMS 257 (257)
T ss_pred CccCHHHHHHHHHHHhCcccccccCcEEeecCCEeCC
Confidence 7899999999999988764 37889998876553
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-19 Score=162.00 Aligned_cols=221 Identities=15% Similarity=0.090 Sum_probs=155.3
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc----c--cccceeEEecccchhhHhhhcc-------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE----D--MFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
+..+++||||||+|+||+++++.|+++|++|++++|+..+.... . ...+.++.+|+.|.+.+..+++
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 34568999999999999999999999999999999986532111 0 1135678899999888877764
Q ss_pred CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|+|||+++......... ...+..+.+|+.++..+++++.+ .+..++|++||.....
T Consensus 87 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--------------- 151 (255)
T PRK07523 87 PIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL--------------- 151 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc---------------
Confidence 5899999999753211211 22345677999999999887764 3556999999964421
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHh---hhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTK---DFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+......|+.+|...+.+++.++. ..++++.++||+.+.++...... ....+... +... ...
T Consensus 152 --~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~---~~~~~~~~-~~~~---------~~~ 216 (255)
T PRK07523 152 --ARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALV---ADPEFSAW-LEKR---------TPA 216 (255)
T ss_pred --CCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhc---cCHHHHHH-HHhc---------CCC
Confidence 223456899999999999999876 35799999999999887421000 00111111 1111 112
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
..+...+|+|.+++.++..+ .+.++++.++...|
T Consensus 217 ~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 217 GRWGKVEELVGACVFLASDASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred CCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCeecc
Confidence 34678999999999998754 26788888776544
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.4e-19 Score=160.99 Aligned_cols=217 Identities=13% Similarity=0.026 Sum_probs=152.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
.++++|||||+|+||++++++|+++|++|++++|+....... ....+.++.+|++|.+.+.++++ ++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999999875432111 11245678999999988887765 57
Q ss_pred CEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHH----HHhCCC------CeEEEeecccccCCCcccccccCC
Q 017290 92 DHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEA----SRISGV------KRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a----~~~~~~------~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
|+|||+|+........+ .+....+++|+.++.+++++ +.+.+. .++|++||...+..
T Consensus 85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------- 154 (287)
T PRK06194 85 HLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLA---------- 154 (287)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC----------
Confidence 99999999754321222 22344578999998887766 344433 48999999766532
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhhhC-----CcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEee
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKDFG-----IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMW 233 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~~-----~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (374)
..+...|+.+|...|.+++.+..+.+ +++..+.|+.+..+- .... ...+..+.
T Consensus 155 -------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~--------------~~~~-~~~~~~~~ 212 (287)
T PRK06194 155 -------PPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI--------------WQSE-RNRPADLA 212 (287)
T ss_pred -------CCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc--------------cccc-ccCchhcc
Confidence 12346799999999999999887644 555566666554321 1111 12344555
Q ss_pred CCCcccccceeHHHHHHHHHhhhccCCCCcEEecCCCccCHHHHHHHHHHhcCC
Q 017290 234 GDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDK 287 (374)
Q Consensus 234 ~~~~~~~~~i~~~Dva~~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~ 287 (374)
+++.+.+++++++|.+..+.... .++..|+++.+.+.+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~--------------~~s~~dva~~i~~~~~~ 252 (287)
T PRK06194 213 NTAPPTRSQLIAQAMSQKAVGSG--------------KVTAEEVAQLVFDAIRA 252 (287)
T ss_pred cCccccchhhHHHHHHHhhhhcc--------------CCCHHHHHHHHHHHHHc
Confidence 67778888999999888764331 17899999998886643
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.3e-19 Score=156.49 Aligned_cols=209 Identities=13% Similarity=0.064 Sum_probs=151.4
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc----cccccceeEEecccchhhHhhhcc-------CCC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT----EDMFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
.+++++|||||+|+||+++++.|+++|++|++++|++.+... ......+++.+|+.|.+++..+++ ++|
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD 84 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence 356899999999999999999999999999999997654211 112346778899999888776664 689
Q ss_pred EEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
+|||+++........ .......+..|+.++.++++++. +.+.+++|++||...+..
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------- 147 (239)
T PRK12828 85 ALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKA----------------- 147 (239)
T ss_pred EEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccC-----------------
Confidence 999999864321111 11234457788899888888764 456779999999877642
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccc
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (374)
..+...|+.+|...+.+++.++.. .++++.++||+.++++... . . ... .....+
T Consensus 148 ~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~-------------~------~--~~~--~~~~~~ 204 (239)
T PRK12828 148 GPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNR-------------A------D--MPD--ADFSRW 204 (239)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchh-------------h------c--CCc--hhhhcC
Confidence 123467999999999888877654 4799999999999986311 0 0 000 112347
Q ss_pred eeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 243 TFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
++++|+|+++..++.+. .+..+.+.++..+
T Consensus 205 ~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~~~~ 238 (239)
T PRK12828 205 VTPEQIAAVIAFLLSDEAQAITGASIPVDGGVAL 238 (239)
T ss_pred CCHHHHHHHHHHHhCcccccccceEEEecCCEeC
Confidence 99999999999998764 2567777766543
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.8e-19 Score=158.20 Aligned_cols=220 Identities=19% Similarity=0.066 Sum_probs=151.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
..+++||||||+|+||++++++|+++|++|+++.|+....... ....+.++.+|+++.+.+..+++
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 3568999999999999999999999999998877654221110 01134578899999887766654
Q ss_pred CCCEEEEcccccCCcccccCC---cceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~~~---~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
++|+|||+|+..........+ .+..+.+|+.+...+++++.+. ...++|++||...|.
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------- 146 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR----------------- 146 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC-----------------
Confidence 689999999964321121112 2456788999988888877653 124899999987653
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhh--CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDF--GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (374)
+..+.+.|+.+|...|.+++.++.+. ++.+.+++|+.+.++...... ............ .......+
T Consensus 147 ~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~ 215 (252)
T PRK06077 147 PAYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLF--KVLGMSEKEFAE---------KFTLMGKI 215 (252)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhh--hcccccHHHHHH---------hcCcCCCC
Confidence 33456789999999999999998765 588999999999776321000 000000000000 00112368
Q ss_pred eeHHHHHHHHHhhhccC--CCCcEEecCCCc
Q 017290 243 TFIDECVEGVLRLTKSD--FREPVNIGSDEM 271 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~--~~~~~~i~~~~~ 271 (374)
++++|+|++++.+++.+ .+++|++.++..
T Consensus 216 ~~~~dva~~~~~~~~~~~~~g~~~~i~~g~~ 246 (252)
T PRK06077 216 LDPEEVAEFVAAILKIESITGQVFVLDSGES 246 (252)
T ss_pred CCHHHHHHHHHHHhCccccCCCeEEecCCee
Confidence 99999999999999755 378899988754
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-19 Score=159.88 Aligned_cols=218 Identities=16% Similarity=0.073 Sum_probs=151.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
.++++|||||+|+||+++++.|++.|++|++++|+....... ....+.++.+|+.+.+.+.++++ ++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999999876432211 11246788999999888877664 58
Q ss_pred CEEEEcccccCCcccccCC---cceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~~~---~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|+|||+++..........+ .+..+++|+.++..+++++. +.+.+++|++||...+...
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~--------------- 146 (250)
T TIGR03206 82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS--------------- 146 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC---------------
Confidence 9999999864321122222 24458899999988877764 4566799999998776432
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
.....|+.+|...+.+++.++.+. +++++++||+.++++...... .......+...... .. ...
T Consensus 147 --~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~ 214 (250)
T TIGR03206 147 --SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTR-AI---------PLG 214 (250)
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHh-cC---------Ccc
Confidence 223579999999999999887664 799999999999887321000 00011111111111 10 112
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
.+...+|+|+++..++..+ .+.++++.++
T Consensus 215 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g 247 (250)
T TIGR03206 215 RLGQPDDLPGAILFFSSDDASFITGQVLSVSGG 247 (250)
T ss_pred CCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCC
Confidence 3567899999999988764 2677887765
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.7e-19 Score=159.39 Aligned_cols=215 Identities=19% Similarity=0.091 Sum_probs=149.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEE-eCCCCcccc----c--ccccceeEEecccchhhHhhhcc--------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIAS-DWKKNEHMT----E--DMFCHEFHLVDLRVMDNCLKVTK-------- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~----~--~~~~i~~~~~dl~~~~~~~~~~~-------- 89 (374)
+.++|+||||+|+||+++++.|+++|++|.++ .|+..+... . ....++++.+|++|.+.+..+++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 35899999999999999999999999999875 555432110 0 11246788999999998877665
Q ss_pred -----CCCEEEEcccccCCcccccC---CcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCC
Q 017290 90 -----GVDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 -----~~d~vi~~a~~~~~~~~~~~---~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|+|||+|+........+. .....+++|+.++.++++++... ...++|++||..++..
T Consensus 85 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~----------- 153 (254)
T PRK12746 85 RVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLG----------- 153 (254)
T ss_pred ccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCC-----------
Confidence 48999999996532111111 12445678999999999887653 2348999999877532
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
..+...|+.+|...|.+++.++.+ .++++++++|+.++++..... .....+.......
T Consensus 154 ------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~----~~~~~~~~~~~~~--------- 214 (254)
T PRK12746 154 ------FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKL----LDDPEIRNFATNS--------- 214 (254)
T ss_pred ------CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhh----ccChhHHHHHHhc---------
Confidence 234467999999999998888764 469999999999988742110 0001111111111
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
.....+++++|+++++..++..+ .+++|+++++
T Consensus 215 ~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 215 SVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG 251 (254)
T ss_pred CCcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence 11235678999999999888764 3678998865
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.6e-19 Score=157.55 Aligned_cols=216 Identities=14% Similarity=0.111 Sum_probs=151.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc-------CC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
+|+||||||+|+||+++++.|+++|++|++++|+...... ....++.++.+|+++.+.+.++++ .+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 4789999999999999999999999999999987542110 011246788999999887766553 68
Q ss_pred CEEEEcccccCCc--c---cccCCcceehhhhHHHHHHHHHHHHhC-----C-----CCeEEEeecccccCCCccccccc
Q 017290 92 DHVFNLAADMGGM--G---FIQSNHSVIMYNNTMISFNMLEASRIS-----G-----VKRFFYASSACIYPEFKQLETNV 156 (374)
Q Consensus 92 d~vi~~a~~~~~~--~---~~~~~~~~~~~~n~~~~~~ll~a~~~~-----~-----~~~~i~~Ss~~vy~~~~~~~~~~ 156 (374)
|+|||+++..... . ......+..+++|+.++.++++++... + ..++|++||...+.
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--------- 152 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM--------- 152 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc---------
Confidence 9999999864211 0 112234556889999999998876432 1 45799999976542
Q ss_pred CCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEee
Q 017290 157 SLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMW 233 (374)
Q Consensus 157 ~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (374)
+..+.+.|+.+|...|.+++.++.+ .+++++++||+.+.++... .....+ ....... .
T Consensus 153 --------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~-----~~~~~~-~~~~~~~-~---- 213 (256)
T PRK12745 153 --------VSPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTA-----PVTAKY-DALIAKG-L---- 213 (256)
T ss_pred --------CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccc-----ccchhH-Hhhhhhc-C----
Confidence 1224468999999999999999864 5799999999999886421 111111 1111110 0
Q ss_pred CCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 234 GDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 234 ~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
.....+.+..|+++++..++... .+..|++.++...
T Consensus 214 ---~~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~ 253 (256)
T PRK12745 214 ---VPMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGLSI 253 (256)
T ss_pred ---CCcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCeec
Confidence 11234779999999999888654 3678999876544
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.7e-19 Score=161.14 Aligned_cols=221 Identities=15% Similarity=0.041 Sum_probs=149.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEEEEc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHVFNL 97 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi~~ 97 (374)
++++++||||+|+||++++++|+++|++|++++|+.++.......+++++.+|++|.+.+..+++ ++|+|||+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ 81 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN 81 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 46899999999999999999999999999999998764333223357889999999998877765 78999999
Q ss_pred ccccCCccc---ccCCcceehhhhHHHH----HHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCC
Q 017290 98 AADMGGMGF---IQSNHSVIMYNNTMIS----FNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170 (374)
Q Consensus 98 a~~~~~~~~---~~~~~~~~~~~n~~~~----~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~ 170 (374)
|+....... ...+.+..+++|+.++ +.++..+++.+..++|++||...+. +.....
T Consensus 82 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~-----------------~~~~~~ 144 (273)
T PRK06182 82 AGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI-----------------YTPLGA 144 (273)
T ss_pred CCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC-----------------CCCCcc
Confidence 997532111 1223455678888774 4555566677777999999965421 111235
Q ss_pred chHHhHHHHHHHHHHHHh---hhCCcEEEEeeCcccCCCCCCCC-------CCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 171 AYGLEKLASEELCKHYTK---DFGIECRVGRFHNIYGPFGTWKG-------MEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 171 ~y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
.|+.+|...+.+.+.++. ..+++++++|||.+..+...... .............. .+.......
T Consensus 145 ~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 218 (273)
T PRK06182 145 WYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAA------SMRSTYGSG 218 (273)
T ss_pred HhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHH------HHHHhhccc
Confidence 799999999999877764 35799999999999876421000 00000000000000 000111223
Q ss_pred cceeHHHHHHHHHhhhccCC-CCcEEecC
Q 017290 241 SFTFIDECVEGVLRLTKSDF-REPVNIGS 268 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~~-~~~~~i~~ 268 (374)
.+.+.+|+|++++.++.... ...|+++.
T Consensus 219 ~~~~~~~vA~~i~~~~~~~~~~~~~~~g~ 247 (273)
T PRK06182 219 RLSDPSVIADAISKAVTARRPKTRYAVGF 247 (273)
T ss_pred cCCCHHHHHHHHHHHHhCCCCCceeecCc
Confidence 56789999999999988764 45676664
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.4e-19 Score=160.60 Aligned_cols=223 Identities=17% Similarity=0.130 Sum_probs=150.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc----ccccceeEEecccchhhHhhhcc-------CCC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE----DMFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
.+.+++|||||+|+||+++++.|+++|++|++++|+++..... ....+.++.+|+.+.+.+.++++ ++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 3568999999999999999999999999999999976532211 11135788999999888776653 789
Q ss_pred EEEEcccccCCc----ccccCCcceehhhhHHHHHHHHHHH----HhCCC-CeEEEeecccccCCCcccccccCCCCCCC
Q 017290 93 HVFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMLEAS----RISGV-KRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 93 ~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~-~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+|||+++..... .....+....++.|+.++..+++++ +..+. ++++++||.....
T Consensus 89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~---------------- 152 (264)
T PRK12829 89 VLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL---------------- 152 (264)
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc----------------
Confidence 999999975211 1122234566889999998888876 33444 5788888754321
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceE-e---eCCC
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFE-M---WGDG 236 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~ 236 (374)
.......|+.+|...|.+++.++.+. +++++++||+.++++... ......... . +.... . ....
T Consensus 153 -~~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~-----~~~~~~~~~-~--~~~~~~~~~~~~~~ 223 (264)
T PRK12829 153 -GYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMR-----RVIEARAQQ-L--GIGLDEMEQEYLEK 223 (264)
T ss_pred -CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHH-----HHhhhhhhc-c--CCChhHHHHHHHhc
Confidence 11233579999999999999887653 799999999999987531 011100000 0 00000 0 0001
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
....++++++|+++++..++... .+..|+++++..
T Consensus 224 ~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~ 262 (264)
T PRK12829 224 ISLGRMVEPEDIAATALFLASPAARYITGQAISVDGNVE 262 (264)
T ss_pred CCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCcc
Confidence 12235899999999998887642 367888887653
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-18 Score=156.26 Aligned_cols=218 Identities=15% Similarity=0.080 Sum_probs=147.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc-------CC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
..+++++||||+|+||+++++.|+++|++|++++|++...... ....+.++.+|+++.+.+..+++ ++
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 3568999999999999999999999999999999874311100 11235678899999877766554 68
Q ss_pred CEEEEcccccCC----cccccCCcceehhhhHHHHHHHH----HHHHhCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 92 DHVFNLAADMGG----MGFIQSNHSVIMYNNTMISFNML----EASRISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 92 d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~ll----~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
|++||+|+.... ......+....++.|+.++..++ ..+++.+..++|++||...++.
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--------------- 150 (260)
T PRK12823 86 DVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI--------------- 150 (260)
T ss_pred eEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC---------------
Confidence 999999984311 11222233445677887766444 4445566669999999876531
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCC-------CC-CCCcHHHHHHHHhccCCceEe
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTW-------KG-MEKAPAAFCRKALTSTDKFEM 232 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~ 232 (374)
+...|+.+|...+.+++.++.+. ++++.+++|+.++++.... .. .......++..... ..
T Consensus 151 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---- 221 (260)
T PRK12823 151 ----NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLD-SS---- 221 (260)
T ss_pred ----CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhc-cC----
Confidence 12469999999999999998765 8999999999999873110 00 01112222222211 11
Q ss_pred eCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 233 WGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 233 ~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
....+.+.+|+|++++.++... .+.++++.+++
T Consensus 222 -----~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 222 -----LMKRYGTIDEQVAAILFLASDEASYITGTVLPVGGGD 258 (260)
T ss_pred -----CcccCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence 1223567899999999988654 36778887654
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.7e-19 Score=156.49 Aligned_cols=220 Identities=15% Similarity=0.042 Sum_probs=151.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-----cccceeEEecccchhhHhhhcc-------CC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-----MFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
..++++|||||+|+||+++++.|+++|++|++++|++.+..... ...+.++.+|+.+.+.+..+++ ++
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 35689999999999999999999999999999999875422110 1235789999999998877664 57
Q ss_pred CEEEEcccccCCcc----cccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 92 DHVFNLAADMGGMG----FIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 92 d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
|+|||+++...... ......+..+.+|+.++..+++.+. +.+.++||++||...+..
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------- 147 (251)
T PRK07231 83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRP--------------- 147 (251)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCC---------------
Confidence 99999998643211 1222345568888888766666554 456679999999876542
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
..+...|+.+|...+.+++.++.+. ++++++++|+.+..+...... ............ ...+..
T Consensus 148 --~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~~~~~~~~~~----------~~~~~~ 214 (251)
T PRK07231 148 --RPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFM-GEPTPENRAKFL----------ATIPLG 214 (251)
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhh-cccChHHHHHHh----------cCCCCC
Confidence 2345679999999999998887653 799999999999765321100 000001111111 111234
Q ss_pred cceeHHHHHHHHHhhhccCC----CCcEEecCCCc
Q 017290 241 SFTFIDECVEGVLRLTKSDF----REPVNIGSDEM 271 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~~----~~~~~i~~~~~ 271 (374)
.+++++|+|.+++.++.... +..+.+.++..
T Consensus 215 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~ 249 (251)
T PRK07231 215 RLGTPEDIANAALFLASDEASWITGVTLVVDGGRC 249 (251)
T ss_pred CCcCHHHHHHHHHHHhCccccCCCCCeEEECCCcc
Confidence 57899999999999987542 45567765543
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.2e-18 Score=154.26 Aligned_cols=220 Identities=21% Similarity=0.182 Sum_probs=170.6
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGF 106 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~ 106 (374)
|+||||||||++|++++++|+++||+|+++.|++....... .++++..+|+.+...+...+++.+.++++.+...
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~---- 75 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD---- 75 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEecccc----
Confidence 68999999999999999999999999999999988766555 7889999999999999999999999999998531
Q ss_pred ccCCcceehhhhHHHHHHHHHHHHh--CCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 107 IQSNHSVIMYNNTMISFNMLEASRI--SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 107 ~~~~~~~~~~~n~~~~~~ll~a~~~--~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
.+. ....... ..++..+++ .++++++++|.... .......|..+|..+|..+.
T Consensus 76 --~~~-~~~~~~~---~~~~~~a~~a~~~~~~~~~~s~~~~-------------------~~~~~~~~~~~~~~~e~~l~ 130 (275)
T COG0702 76 --GSD-AFRAVQV---TAVVRAAEAAGAGVKHGVSLSVLGA-------------------DAASPSALARAKAAVEAALR 130 (275)
T ss_pred --ccc-chhHHHH---HHHHHHHHHhcCCceEEEEeccCCC-------------------CCCCccHHHHHHHHHHHHHH
Confidence 011 1122222 334444444 44778998888644 11344689999999999999
Q ss_pred HHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC--CCC
Q 017290 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FRE 262 (374)
Q Consensus 185 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~--~~~ 262 (374)
. .+++++++|+..+|..... .++......+.+....+. ..++++..+|++.++..++..+ .++
T Consensus 131 ~----sg~~~t~lr~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~--~~~~~i~~~d~a~~~~~~l~~~~~~~~ 195 (275)
T COG0702 131 S----SGIPYTTLRRAAFYLGAGA---------AFIEAAEAAGLPVIPRGI--GRLSPIAVDDVAEALAAALDAPATAGR 195 (275)
T ss_pred h----cCCCeEEEecCeeeeccch---------hHHHHHHhhCCceecCCC--CceeeeEHHHHHHHHHHHhcCCcccCc
Confidence 9 7999999997777765431 112233333333333333 3789999999999999999876 689
Q ss_pred cEEecCCCccCHHHHHHHHHHhcCCCCCc
Q 017290 263 PVNIGSDEMVSMNEMAEIVLSFEDKKLPI 291 (374)
Q Consensus 263 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~ 291 (374)
+|.+++++..+..++++.+.+..|++...
T Consensus 196 ~~~l~g~~~~~~~~~~~~l~~~~gr~~~~ 224 (275)
T COG0702 196 TYELAGPEALTLAELASGLDYTIGRPVGL 224 (275)
T ss_pred EEEccCCceecHHHHHHHHHHHhCCccee
Confidence 99999999999999999999999998765
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.5e-19 Score=157.10 Aligned_cols=218 Identities=14% Similarity=0.043 Sum_probs=153.4
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-cccceeEEecccchhhHhhhcc---CCCEEEEcc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVTK---GVDHVFNLA 98 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~~~---~~d~vi~~a 98 (374)
++.+++++||||+|+||+++++.|+++|++|++++|+.+...... ..+..++.+|+++.+.+.++++ ++|+|||++
T Consensus 6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~a 85 (245)
T PRK07060 6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCA 85 (245)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECC
Confidence 345689999999999999999999999999999999865432211 1135678899999888877775 589999999
Q ss_pred cccCCcc---cccCCcceehhhhHHHHHHHHHHHHhC----C-CCeEEEeecccccCCCcccccccCCCCCCCCCCCCCC
Q 017290 99 ADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRIS----G-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170 (374)
Q Consensus 99 ~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~~----~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~ 170 (374)
+...... ....+.+..+..|+.++..+++++.+. + ..++|++||...+.. ..+..
T Consensus 86 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------------~~~~~ 148 (245)
T PRK07060 86 GIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVG-----------------LPDHL 148 (245)
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCC-----------------CCCCc
Confidence 9753211 111234445678999999988877542 2 358999999766532 12346
Q ss_pred chHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHH
Q 017290 171 AYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247 (374)
Q Consensus 171 ~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 247 (374)
.|+.+|...|.+++.++.+ .+++++.+||+.++++..... .. . ......... ......+++.+|
T Consensus 149 ~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~-~~-~-~~~~~~~~~----------~~~~~~~~~~~d 215 (245)
T PRK07060 149 AYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEA-WS-D-PQKSGPMLA----------AIPLGRFAEVDD 215 (245)
T ss_pred HhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhh-cc-C-HHHHHHHHh----------cCCCCCCCCHHH
Confidence 7999999999999998765 479999999999998753210 00 0 001111110 112345899999
Q ss_pred HHHHHHhhhccC----CCCcEEecCCC
Q 017290 248 CVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 248 va~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
++++++.++..+ .+..+++.++.
T Consensus 216 ~a~~~~~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK07060 216 VAAPILFLLSDAASMVSGVSLPVDGGY 242 (245)
T ss_pred HHHHHHHHcCcccCCccCcEEeECCCc
Confidence 999999999765 26777777653
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.4e-18 Score=152.66 Aligned_cols=212 Identities=19% Similarity=0.116 Sum_probs=150.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc----------ccccceeEEecccchhhHhhhcc-----
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE----------DMFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----------~~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
++|+++||||+|+||+++++.|+++|++|++++|...+.... ....+.++.+|+.+.+.+.++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 458999999999999999999999999999987753321111 01246788999999988877663
Q ss_pred --CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHH-----hCCCCeEEEeecccccCCCcccccccCCC
Q 017290 90 --GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASR-----ISGVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~-----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|+|||+++......... .+....+.+|+.++..+++++. +.+.+++|++||...+..
T Consensus 85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------- 153 (249)
T PRK12827 85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRG----------- 153 (249)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCC-----------
Confidence 6899999999754211111 2234567889999999999887 455679999999766532
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
..+...|+.+|...+.+++.++.+ .+++++++||+.+.++.... ...... ... ..
T Consensus 154 ------~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~----~~~~~~---~~~-~~-------- 211 (249)
T PRK12827 154 ------NRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADN----AAPTEH---LLN-PV-------- 211 (249)
T ss_pred ------CCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccc----cchHHH---HHh-hC--------
Confidence 123467999999999998888765 37999999999999875321 111111 111 11
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
....+.+.+|++++++.++... .++.+++.++.
T Consensus 212 -~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g~ 248 (249)
T PRK12827 212 -PVQRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGGF 248 (249)
T ss_pred -CCcCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCC
Confidence 1123458899999999888653 35677777654
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.8e-18 Score=155.88 Aligned_cols=234 Identities=14% Similarity=0.074 Sum_probs=155.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
++++++||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|++|.+++.++++ ++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 568899999999999999999999999999999886432211 11235678899999988877664 57
Q ss_pred CEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHH----hCC-CCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASR----ISG-VKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~----~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
|+|||+|+........+ .+.+..+++|+.++..+++++. +.+ ..++|++||...+.
T Consensus 85 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~---------------- 148 (275)
T PRK05876 85 DVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV---------------- 148 (275)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc----------------
Confidence 99999999743221222 2234557899999998888764 343 35899999976653
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
+..+...|+.+|...+.+.+.++.+ .++++++++|+.+.++.... ..................+.....+
T Consensus 149 -~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (275)
T PRK05876 149 -PNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVAN------SERIRGAACAQSSTTGSPGPLPLQD 221 (275)
T ss_pred -CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccc------hhhhcCccccccccccccccccccc
Confidence 2234578999999866666666543 47999999999988763210 0000000000011111223333456
Q ss_pred cceeHHHHHHHHHhhhccCCCCcEEecCCCccCHHHHHHHHHHhc
Q 017290 241 SFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFE 285 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~ 285 (374)
++++++|+|++++.++.+. +.|.+. .+.....+.+...++.
T Consensus 222 ~~~~~~dva~~~~~ai~~~--~~~~~~--~~~~~~~~~~~~~~~~ 262 (275)
T PRK05876 222 DNLGVDDIAQLTADAILAN--RLYVLP--HAASRASIRRRFERID 262 (275)
T ss_pred cCCCHHHHHHHHHHHHHcC--CeEEec--ChhhHHHHHHHHHHHH
Confidence 7899999999999998765 345554 3345555555555444
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4e-18 Score=155.63 Aligned_cols=219 Identities=15% Similarity=0.081 Sum_probs=155.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc--------cccccceeEEecccchhhHhhhcc------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT--------EDMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
..+|++|||||+|+||+++++.|++.|++|+++.++...... .....+.++.+|+++.+.+.++++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 346899999999999999999999999999887765432110 011235678899999888776653
Q ss_pred -CCCEEEEcccccCCc----ccccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 -GVDHVFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|+|||+|+..... +....+.+..+++|+.++..+++++... .-.++|++||...|...
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~------------- 199 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS------------- 199 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC-------------
Confidence 689999999964211 1223345667899999999999988653 12489999998776421
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
.....|+.+|...+.+++.++.+ .++++.+++||.+.++.... .......+.... .....
T Consensus 200 ----~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~---~~~~~~~~~~~~----------~~~p~ 262 (300)
T PRK06128 200 ----PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPS---GGQPPEKIPDFG----------SETPM 262 (300)
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCccc---CCCCHHHHHHHh----------cCCCC
Confidence 22357999999999999998865 47999999999999874211 011112222111 11123
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
..+.+.+|++.+++.++... .+.++++.++..+
T Consensus 263 ~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~~ 299 (300)
T PRK06128 263 KRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGGLLL 299 (300)
T ss_pred CCCcCHHHHHHHHHHHhCccccCccCcEEeeCCCEeC
Confidence 35678999999999888754 2678888877654
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.9e-19 Score=157.72 Aligned_cols=224 Identities=12% Similarity=0.088 Sum_probs=151.1
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc--------cccceeEEecccchhhHhhhcc-------C
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED--------MFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
.++||||||+|+||+++++.|+++|++|++++|+........ ...+.++.+|+++.+.+..+++ +
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999999999998764321110 1246788999999887776653 6
Q ss_pred CCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccc-cCCCcccccccCCCCC
Q 017290 91 VDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACI-YPEFKQLETNVSLKES 161 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~v-y~~~~~~~~~~~~~e~ 161 (374)
+|+|||+|+......... .+.+..+++|+.++..+++++.. .+ ..++|++||... ++
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~-------------- 147 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVG-------------- 147 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccC--------------
Confidence 899999998654222222 22345578899998777766543 44 348999998542 21
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHh---hhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhc-cCCceEeeCCCc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTK---DFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALT-STDKFEMWGDGL 237 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 237 (374)
......|+.+|...+.+++.++. ..++++.++|||.++++... ...+..+...... .+.....+.++.
T Consensus 148 ----~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (259)
T PRK12384 148 ----SKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMF----QSLLPQYAKKLGIKPDEVEQYYIDKV 219 (259)
T ss_pred ----CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhh----hhhhHHHHHhcCCChHHHHHHHHHhC
Confidence 12346799999999999888875 36899999999998865321 1122221111000 000011112233
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+...+++.+|++.+++.++.+. .+..|++++++.
T Consensus 220 ~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 220 PLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQV 257 (259)
T ss_pred cccCCCCHHHHHHHHHHHcCcccccccCceEEEcCCEE
Confidence 4567899999999999887654 367789887654
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-18 Score=154.66 Aligned_cols=223 Identities=16% Similarity=0.095 Sum_probs=152.4
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
+....|++|||||+|+||+++++.|+++|++|++++|+... .....+.++.+|+.+.+.+.++++ ++|+|
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLT---QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhh---hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 33456899999999999999999999999999999988611 112346788999999988887764 48999
Q ss_pred EEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 95 FNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 95 i~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
||+++....... ...+....+++|+.+...+++++. +.+..++|++||..... +..
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~-----------------~~~ 143 (252)
T PRK08220 81 VNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV-----------------PRI 143 (252)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc-----------------CCC
Confidence 999997532111 222345568889999888888764 34445899999965421 223
Q ss_pred CCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcH-HHHHHHHhccCCceEeeCCCcccccce
Q 017290 168 PQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAP-AAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
+...|+.+|...+.+++.++.+ .++++++++|+.++++........... ...+..... ..........++
T Consensus 144 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 217 (252)
T PRK08220 144 GMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPE------QFKLGIPLGKIA 217 (252)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHH------HHhhcCCCcccC
Confidence 4578999999999999988866 689999999999998742110000000 000000000 000111234578
Q ss_pred eHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 244 FIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
+++|+|++++.++... .+.+..+.++.
T Consensus 218 ~~~dva~~~~~l~~~~~~~~~g~~i~~~gg~ 248 (252)
T PRK08220 218 RPQEIANAVLFLASDLASHITLQDIVVDGGA 248 (252)
T ss_pred CHHHHHHHHHHHhcchhcCccCcEEEECCCe
Confidence 9999999999988653 24555666553
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.2e-19 Score=153.21 Aligned_cols=205 Identities=13% Similarity=0.070 Sum_probs=141.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--ccccceeEEecccchhhHhhhcc---CCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--DMFCHEFHLVDLRVMDNCLKVTK---GVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~i~~~~~dl~~~~~~~~~~~---~~d~vi~~a~ 99 (374)
+||++|||||+|+||+++++.|+++ ++|++++|++...... ...+++++.+|+.|.+.+.++++ ++|+|||+++
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 80 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAG 80 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 3579999999999999999999999 9999999986542211 11246889999999999988886 6999999998
Q ss_pred ccCCccccc---CCcceehhhhHHH----HHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCch
Q 017290 100 DMGGMGFIQ---SNHSVIMYNNTMI----SFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAY 172 (374)
Q Consensus 100 ~~~~~~~~~---~~~~~~~~~n~~~----~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y 172 (374)
......... ......+..|+.+ +.++++++++.+ +++|++||...+.. ..+...|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~-----------------~~~~~~y 142 (227)
T PRK08219 81 VADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRA-----------------NPGWGSY 142 (227)
T ss_pred cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCc-----------------CCCCchH
Confidence 643211111 1223346677777 445555555554 58999999776532 1234679
Q ss_pred HHhHHHHHHHHHHHHhh-hC-CcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHH
Q 017290 173 GLEKLASEELCKHYTKD-FG-IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE 250 (374)
Q Consensus 173 ~~sK~~~E~~~~~~~~~-~~-~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 250 (374)
+.+|...+.+++.++.. .+ +++..++|+.+.++.. ..+... .+. ......+++++|+++
T Consensus 143 ~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~---------~~~~~~---~~~-------~~~~~~~~~~~dva~ 203 (227)
T PRK08219 143 AASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQ---------RGLVAQ---EGG-------EYDPERYLRPETVAK 203 (227)
T ss_pred HHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHh---------hhhhhh---hcc-------ccCCCCCCCHHHHHH
Confidence 99999999998887654 24 7888888887654321 011100 011 112246799999999
Q ss_pred HHHhhhccCC-CCcEEec
Q 017290 251 GVLRLTKSDF-REPVNIG 267 (374)
Q Consensus 251 ~i~~~~~~~~-~~~~~i~ 267 (374)
+++.+++++. +.++++.
T Consensus 204 ~~~~~l~~~~~~~~~~~~ 221 (227)
T PRK08219 204 AVRFAVDAPPDAHITEVV 221 (227)
T ss_pred HHHHHHcCCCCCccceEE
Confidence 9999998875 4566654
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-18 Score=154.47 Aligned_cols=217 Identities=15% Similarity=0.009 Sum_probs=148.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEE-eCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIAS-DWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
.+++++||||+|+||+++++.|+++|++|+++ .|+....... ....+.++.+|+++.+++..+++ +
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45899999999999999999999999998764 5654321110 11246788899999998877665 5
Q ss_pred CCEEEEcccccCCcccccCC---cceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~~~---~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+|+|||+++........+.+ ....+.+|+.++..+++++.. .+.++||++||...+.
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---------------- 146 (250)
T PRK08063 83 LDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR---------------- 146 (250)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc----------------
Confidence 89999999864321122222 233567888888888877754 4456999999965532
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
+..+...|+.+|...|.+++.++.+ .++++++++|+.+..+....... ...+...... . ....
T Consensus 147 -~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~---~~~~~~~~~~-~---------~~~~ 212 (250)
T PRK08063 147 -YLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPN---REELLEDARA-K---------TPAG 212 (250)
T ss_pred -CCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccC---chHHHHHHhc-C---------CCCC
Confidence 2234468999999999999988765 47999999999998664211000 0111111111 0 0112
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
.+++.+|+|++++.++..+ .+..+++.++..
T Consensus 213 ~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~ 247 (250)
T PRK08063 213 RMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGRS 247 (250)
T ss_pred CCcCHHHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence 4689999999999998764 267778776654
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.7e-18 Score=155.01 Aligned_cols=164 Identities=21% Similarity=0.135 Sum_probs=124.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--------CCCEEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--------GVDHVFN 96 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--------~~d~vi~ 96 (374)
++++|+||||+|+||+++++.|++.|++|++++|++.........+++++.+|++|.+.+..+++ .+|+|||
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~ 82 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN 82 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence 45789999999999999999999999999999998765433333357888999999887766553 5799999
Q ss_pred cccccCCccccc---CCcceehhhhHHH----HHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 97 LAADMGGMGFIQ---SNHSVIMYNNTMI----SFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 97 ~a~~~~~~~~~~---~~~~~~~~~n~~~----~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
+|+......... .+....+++|+.+ +..++..+++.+..++|++||...+. +..+.
T Consensus 83 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~-----------------~~~~~ 145 (277)
T PRK05993 83 NGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV-----------------PMKYR 145 (277)
T ss_pred CCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC-----------------CCCcc
Confidence 998643211111 1234467889888 56667777777777999999965432 22345
Q ss_pred CchHHhHHHHHHHHHHHHh---hhCCcEEEEeeCcccCC
Q 017290 170 DAYGLEKLASEELCKHYTK---DFGIECRVGRFHNIYGP 205 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~g~ 205 (374)
..|+.+|...|.+++.++. ..++++++++||.+-.+
T Consensus 146 ~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 146 GAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 6899999999999988763 35899999999988765
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.8e-18 Score=151.36 Aligned_cols=214 Identities=17% Similarity=0.118 Sum_probs=150.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc-cccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE-HMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
.+++++||||+|+||++++++|+++|++|+++.++... .... ...++.++.+|+.+.+.+.++++ .
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999876554321 1110 11246788999999988877765 4
Q ss_pred CCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+|+|||+|+......... ...+..++.|+.++..+++++.. .+..++|++||...+..
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------- 149 (247)
T PRK12935 85 VDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAG--------------- 149 (247)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCC---------------
Confidence 799999999754211111 23455688999999998888763 33458999999644321
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
..+...|+.+|...+.+++.+..+. ++++++++|+.+.++... ............ .....
T Consensus 150 --~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~-----~~~~~~~~~~~~----------~~~~~ 212 (247)
T PRK12935 150 --GFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVA-----EVPEEVRQKIVA----------KIPKK 212 (247)
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhh-----hccHHHHHHHHH----------hCCCC
Confidence 1234689999999999988887654 899999999999765321 111111111111 11234
Q ss_pred cceeHHHHHHHHHhhhccC---CCCcEEecCCC
Q 017290 241 SFTFIDECVEGVLRLTKSD---FREPVNIGSDE 270 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~---~~~~~~i~~~~ 270 (374)
.+.+++|++++++.+++.. .++.|+++++.
T Consensus 213 ~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g~ 245 (247)
T PRK12935 213 RFGQADEIAKGVVYLCRDGAYITGQQLNINGGL 245 (247)
T ss_pred CCcCHHHHHHHHHHHcCcccCccCCEEEeCCCc
Confidence 6799999999999988654 36889988763
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.9e-19 Score=156.42 Aligned_cols=219 Identities=14% Similarity=0.066 Sum_probs=149.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
+++|+||||||+|+||+++++.|+++|++|++++|++...... ....+.++.+|+++.+.+..+++ +
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 3568999999999999999999999999999999986432111 01246789999999887766553 6
Q ss_pred CCEEEEcccccCCc-c---cccCCcceehhhhHHHHHHHHHHHHhC---CCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 91 VDHVFNLAADMGGM-G---FIQSNHSVIMYNNTMISFNMLEASRIS---GVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 91 ~d~vi~~a~~~~~~-~---~~~~~~~~~~~~n~~~~~~ll~a~~~~---~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+|+|||+|+..... . ....+.+..++.|+.++..+++++... ...++|++||...+.
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~---------------- 146 (258)
T PRK07890 83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH---------------- 146 (258)
T ss_pred ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc----------------
Confidence 89999999864321 1 122334556889999999999887642 124899999975532
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCC-C----CC-CcHHHHHHHHhccCCceEeeC
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWK-G----ME-KAPAAFCRKALTSTDKFEMWG 234 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~-~----~~-~~~~~~~~~~~~~~~~~~~~~ 234 (374)
+..+...|+.+|...+.+++.++.+ .++++.++||+.++++..... . .. .......... .
T Consensus 147 -~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------- 215 (258)
T PRK07890 147 -SQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAET-A--------- 215 (258)
T ss_pred -CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHH-h---------
Confidence 2234568999999999999999865 379999999999998742100 0 00 0001111111 0
Q ss_pred CCcccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
.......+.+++|++++++.+++.. .+.++.+.++
T Consensus 216 ~~~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg 254 (258)
T PRK07890 216 ANSDLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCG 254 (258)
T ss_pred hcCCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCc
Confidence 0112234678999999999988753 2444555544
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.9e-18 Score=153.38 Aligned_cols=216 Identities=15% Similarity=0.105 Sum_probs=148.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEEEEc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHVFNL 97 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi~~ 97 (374)
++++|+||||+|+||++++++|+++|++|++++|+...... ..+++++.+|+.|.+.+.++++ ++|+|||+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--IPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 45789999999999999999999999999999998654322 2357889999999998888775 47999999
Q ss_pred ccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCC
Q 017290 98 AADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170 (374)
Q Consensus 98 a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~ 170 (374)
|+....... ...+.+..+++|+.++..+++++ ++.+.+++|++||...+.. .....
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------------~~~~~ 143 (270)
T PRK06179 81 AGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP-----------------APYMA 143 (270)
T ss_pred CCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC-----------------CCCcc
Confidence 997532111 11234556888998888887764 5667789999999765431 12346
Q ss_pred chHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCC-CCCcHHHH--HHHHhccCCceEeeCCCccccccee
Q 017290 171 AYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKG-MEKAPAAF--CRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 171 ~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
.|+.+|...|.+++.++.+ .++++++++|+.+.++...... .......+ ....... ... ........
T Consensus 144 ~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~ 216 (270)
T PRK06179 144 LYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSK-----AVA--KAVKKADA 216 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHH-----HHH--hccccCCC
Confidence 8999999999998888654 5899999999999876432111 00000000 0000000 000 01112456
Q ss_pred HHHHHHHHHhhhccCC-CCcEEe
Q 017290 245 IDECVEGVLRLTKSDF-REPVNI 266 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~~-~~~~~i 266 (374)
.+|+|+.++.++..+. ...|..
T Consensus 217 ~~~va~~~~~~~~~~~~~~~~~~ 239 (270)
T PRK06179 217 PEVVADTVVKAALGPWPKMRYTA 239 (270)
T ss_pred HHHHHHHHHHHHcCCCCCeeEec
Confidence 7899999999888765 444543
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.7e-18 Score=151.06 Aligned_cols=219 Identities=16% Similarity=0.095 Sum_probs=144.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhcc-------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
.+|+||||||+|+||+++++.|+++|++|++++|++...... ....+.++.+|++|.+.+..+++
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999999886542110 11234567899999988877775
Q ss_pred CCCEEEEcccccCCc---cccc---CCcceehhhhHHHHHHHHH----HHHhCCCCeEEEeecccccCCCcccccccCCC
Q 017290 90 GVDHVFNLAADMGGM---GFIQ---SNHSVIMYNNTMISFNMLE----ASRISGVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~---~~~~---~~~~~~~~~n~~~~~~ll~----a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|+|||+|+..... .+.+ ......+++|+.+...+++ .+++.+.+++|++||...+..... ...
T Consensus 83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----~~~ 157 (256)
T PRK09186 83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-----EIY 157 (256)
T ss_pred CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-----hhc
Confidence 389999999753210 1111 1233446677766655544 445566679999999665432110 111
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
+.. +......|+.+|...+.+.+.++.+ .++++++++|+.++++.. ..+...... . .
T Consensus 158 ~~~--~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~---------~~~~~~~~~-~----~---- 217 (256)
T PRK09186 158 EGT--SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP---------EAFLNAYKK-C----C---- 217 (256)
T ss_pred ccc--ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC---------HHHHHHHHh-c----C----
Confidence 211 2223347999999999999877765 469999999998876421 112221111 0 0
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
....+++.+|+|++++.++... .+..+.+.++
T Consensus 218 -~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g 253 (256)
T PRK09186 218 -NGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDG 253 (256)
T ss_pred -CccCCCCHHHhhhhHhheeccccccccCceEEecCC
Confidence 1234789999999999999754 2566666655
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.4e-18 Score=148.63 Aligned_cols=164 Identities=15% Similarity=0.013 Sum_probs=126.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccccccceeEEecccchhhHhhhcc---CCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK---GVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~---~~d~vi~~a~ 99 (374)
...++|+||||+|+||+++++.|+++|+ .|++++|+..+... ...++.++.+|+.+.+.+.++++ .+|+|||+++
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 82 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG 82 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 4567999999999999999999999998 99999998765432 22357889999999998888776 5899999999
Q ss_pred ccCCcc-c---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCc
Q 017290 100 DMGGMG-F---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA 171 (374)
Q Consensus 100 ~~~~~~-~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~ 171 (374)
...... . ...+....+++|+.++..+++++. +.+..++|++||...+.. ..+...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~-----------------~~~~~~ 145 (238)
T PRK08264 83 IFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN-----------------FPNLGT 145 (238)
T ss_pred cCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC-----------------CCCchH
Confidence 732111 1 122334467789999988888764 345668999999766532 234468
Q ss_pred hHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCC
Q 017290 172 YGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGP 205 (374)
Q Consensus 172 y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~ 205 (374)
|+.+|...|.+.+.++.+. +++++++||+.+.++
T Consensus 146 y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~ 182 (238)
T PRK08264 146 YSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTD 182 (238)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccc
Confidence 9999999999999887653 799999999998765
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-17 Score=147.29 Aligned_cols=216 Identities=17% Similarity=0.074 Sum_probs=147.7
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
++.++++|||||+|+||+++++.|+++|++|+++.|+...... .....+.++.+|+.+.+.+.++++
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF 81 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3456899999999999999999999999999888887542110 112246778899999888776654
Q ss_pred -CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 -GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|+|||+++...... ......+..+..|+.++..+++++.. .+.+++|++||...+.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~-------------- 147 (248)
T PRK05557 82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLM-------------- 147 (248)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCc--------------
Confidence 6899999998643211 11123345577899998888887754 4556899999963321
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
.......|+.+|...+.+++.++.. .++++++++|+.+..+... .....+...... .. .
T Consensus 148 ---~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~-----~~~~~~~~~~~~-~~---------~ 209 (248)
T PRK05557 148 ---GNPGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTD-----ALPEDVKEAILA-QI---------P 209 (248)
T ss_pred ---CCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccc-----ccChHHHHHHHh-cC---------C
Confidence 1123467999999999888877653 4799999999988654321 112222222211 11 1
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
...+.+.+|++.++..++... .+..|++.++.
T Consensus 210 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~~ 245 (248)
T PRK05557 210 LGRLGQPEEIASAVAFLASDEAAYITGQTLHVNGGM 245 (248)
T ss_pred CCCCcCHHHHHHHHHHHcCcccCCccccEEEecCCc
Confidence 223678999999998887652 36788887653
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.8e-18 Score=150.47 Aligned_cols=207 Identities=15% Similarity=0.080 Sum_probs=145.6
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
+++||||||+|+||+++++.|++.|++|++++|+....... ....+.++.+|+.+.+.+..+++ ++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 47899999999999999999999999999999986432111 11246788999999888777664 689
Q ss_pred EEEEcccccCCcccccC----CcceehhhhHHHHHHHHHHHHh---CCCCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFIQS----NHSVIMYNNTMISFNMLEASRI---SGVKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~----~~~~~~~~n~~~~~~ll~a~~~---~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
+|||+++........+. .....++.|+.++.++++.+.. .+..++|++||...+..
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~----------------- 143 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTG----------------- 143 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCC-----------------
Confidence 99999986532111111 1344588999999999888743 23458999999776532
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccc
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (374)
..+...|+.+|...|.+++.+..+ .++++++++|+.+..+... ..+. ..+.. ....+.....+
T Consensus 144 ~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~---------~~~~---~~~~~--~~~~~~~~~~~ 209 (263)
T PRK06181 144 VPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRK---------RALD---GDGKP--LGKSPMQESKI 209 (263)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcch---------hhcc---ccccc--cccccccccCC
Confidence 223468999999999999887653 4799999999999865321 0000 00111 11112223478
Q ss_pred eeHHHHHHHHHhhhccCCCCc
Q 017290 243 TFIDECVEGVLRLTKSDFREP 263 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~~~~~ 263 (374)
++++|+|++++.+++.....+
T Consensus 210 ~~~~dva~~i~~~~~~~~~~~ 230 (263)
T PRK06181 210 MSAEECAEAILPAIARRKRLL 230 (263)
T ss_pred CCHHHHHHHHHHHhhCCCCEE
Confidence 999999999999998654444
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.6e-18 Score=152.36 Aligned_cols=210 Identities=17% Similarity=0.077 Sum_probs=143.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--------CCCEEEEc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--------GVDHVFNL 97 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--------~~d~vi~~ 97 (374)
+++|+||||+|+||+++++.|+++|++|++++|+..+.......++.++.+|+.+.+.+..+++ .+|.+||+
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 3689999999999999999999999999999998754332223356788999999877655442 46899999
Q ss_pred ccccCCccc---ccCCcceehhhhHHHHHHH----HHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCC
Q 017290 98 AADMGGMGF---IQSNHSVIMYNNTMISFNM----LEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170 (374)
Q Consensus 98 a~~~~~~~~---~~~~~~~~~~~n~~~~~~l----l~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~ 170 (374)
++....... ...+.+..++.|+.++.++ ++++++.+.+++|++||...+. +.....
T Consensus 82 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------------~~~~~~ 144 (256)
T PRK08017 82 AGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI-----------------STPGRG 144 (256)
T ss_pred CCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccccc-----------------CCCCcc
Confidence 985321111 1223345678888877665 5666677777999999964432 122346
Q ss_pred chHHhHHHHHHHHHHHH---hhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHH
Q 017290 171 AYGLEKLASEELCKHYT---KDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247 (374)
Q Consensus 171 ~y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 247 (374)
.|+.+|...|.+.+.+. ...+++++++||+.+..+.. ...............+...+.+++.+|
T Consensus 145 ~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~d 211 (256)
T PRK08017 145 AYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFT-------------DNVNQTQSDKPVENPGIAARFTLGPEA 211 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchh-------------hcccchhhccchhhhHHHhhcCCCHHH
Confidence 79999999999877653 34579999999988764321 000000001111112223356799999
Q ss_pred HHHHHHhhhccCCCCcEE
Q 017290 248 CVEGVLRLTKSDFREPVN 265 (374)
Q Consensus 248 va~~i~~~~~~~~~~~~~ 265 (374)
+++++..+++++...++.
T Consensus 212 ~a~~~~~~~~~~~~~~~~ 229 (256)
T PRK08017 212 VVPKLRHALESPKPKLRY 229 (256)
T ss_pred HHHHHHHHHhCCCCCcee
Confidence 999999999887665443
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-17 Score=147.71 Aligned_cols=218 Identities=13% Similarity=0.024 Sum_probs=149.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
.++|++|||||+|+||+++++.|+++|++|+++.+....... .....+.++.+|++|.+.+..+++
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 356899999999999999999999999999888765322111 012246788999999888777654
Q ss_pred CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHHhC----CCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRIS----GVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~~----~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|+|||+|+...... ....+.+..+++|+.++..+++++... +..++|++||...+..
T Consensus 87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~-------------- 152 (258)
T PRK09134 87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL-------------- 152 (258)
T ss_pred CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC--------------
Confidence 5799999998643211 122234567889999999998877652 2347888877644321
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh--CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF--GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
......|+.+|...|.+.+.++.+. .+.++.++||.++.... .....+ ..... .. . ..
T Consensus 153 ---~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~------~~~~~~-~~~~~-~~---~------~~ 212 (258)
T PRK09134 153 ---NPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGR------QSPEDF-ARQHA-AT---P------LG 212 (258)
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcc------cChHHH-HHHHh-cC---C------CC
Confidence 1122479999999999999988754 38899999998875421 111222 11111 11 1 11
Q ss_pred cceeHHHHHHHHHhhhccC--CCCcEEecCCCccCHH
Q 017290 241 SFTFIDECVEGVLRLTKSD--FREPVNIGSDEMVSMN 275 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~--~~~~~~i~~~~~~s~~ 275 (374)
...+++|+|++++.+++.+ .+..+++.++..++|.
T Consensus 213 ~~~~~~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~~ 249 (258)
T PRK09134 213 RGSTPEEIAAAVRYLLDAPSVTGQMIAVDGGQHLAWL 249 (258)
T ss_pred CCcCHHHHHHHHHHHhcCCCcCCCEEEECCCeecccc
Confidence 2467999999999999876 3678888877665554
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.6e-17 Score=149.34 Aligned_cols=217 Identities=14% Similarity=0.052 Sum_probs=152.9
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
...+|++|||||+|+||.+++++|+++|++|++++|+....... ....+.++.+|+.+.+.+.++++
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 34568999999999999999999999999999999875421110 11235678999999888777664
Q ss_pred -CCCEEEEcccccCCc-cccc---CCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 -GVDHVFNLAADMGGM-GFIQ---SNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~-~~~~---~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|+|||+|+..... ...+ .+....+++|+.++..+++++... ...++|++||...|....
T Consensus 123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~------------ 190 (290)
T PRK06701 123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE------------ 190 (290)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC------------
Confidence 689999999964211 1111 223456889999999999888652 224899999987764321
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
....|+.+|...+.+++.++.+. +++++.++||.++.+.-.. ......+.... .....
T Consensus 191 -----~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~----~~~~~~~~~~~----------~~~~~ 251 (290)
T PRK06701 191 -----TLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS----DFDEEKVSQFG----------SNTPM 251 (290)
T ss_pred -----CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccc----ccCHHHHHHHH----------hcCCc
Confidence 23579999999999999998764 7999999999998763210 01111111111 11123
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
..+.+.+|+|++++.++... .+.++++.++.
T Consensus 252 ~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg~ 286 (290)
T PRK06701 252 QRPGQPEELAPAYVFLASPDSSYITGQMLHVNGGV 286 (290)
T ss_pred CCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCc
Confidence 45789999999999988764 35677777654
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-17 Score=148.79 Aligned_cols=219 Identities=16% Similarity=0.090 Sum_probs=150.9
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEEE
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHVF 95 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi 95 (374)
...++++|||||+|.||+++++.|++.|++|++++|+... ......+.++.+|+.+.+.+.++++ ++|+||
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 80 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLV 80 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3456899999999999999999999999999999998643 1122346788999999888777664 579999
Q ss_pred EcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHh-----CCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 96 NLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRI-----SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 96 ~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~-----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
|+|+....... .....+..+++|+.++..+++++.. .+..++|++||...+. +..
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~-----------------~~~ 143 (252)
T PRK07856 81 NNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR-----------------PSP 143 (252)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC-----------------CCC
Confidence 99986432111 1223345688999999999987753 2335899999975542 122
Q ss_pred CCCchHHhHHHHHHHHHHHHhhhC--CcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeH
Q 017290 168 PQDAYGLEKLASEELCKHYTKDFG--IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
....|+.+|...|.+++.++.+.+ +.+..++|+.+..+..... ... ....... .. ......+...
T Consensus 144 ~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~--~~~-~~~~~~~-~~---------~~~~~~~~~p 210 (252)
T PRK07856 144 GTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELH--YGD-AEGIAAV-AA---------TVPLGRLATP 210 (252)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhh--ccC-HHHHHHH-hh---------cCCCCCCcCH
Confidence 346899999999999999987643 7888899998876531100 000 0111111 10 0112245678
Q ss_pred HHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 246 DECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 246 ~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
+|+|.+++.++... .+..+.+.++...+
T Consensus 211 ~~va~~~~~L~~~~~~~i~G~~i~vdgg~~~~ 242 (252)
T PRK07856 211 ADIAWACLFLASDLASYVSGANLEVHGGGERP 242 (252)
T ss_pred HHHHHHHHHHcCcccCCccCCEEEECCCcchH
Confidence 99999999988753 35667776655433
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.9e-18 Score=150.59 Aligned_cols=162 Identities=19% Similarity=0.160 Sum_probs=119.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-CCCEEEEcc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-GVDHVFNLA 98 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-~~d~vi~~a 98 (374)
+++||||||+|.||+++++.|++.|++|++++|++...... ...++.++.+|+++.+.+..++. ++|+|||+|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 46899999999999999999999999999999975432111 11246788999999999988876 899999999
Q ss_pred cccCCccccc---CCcceehhhhHHHHHHHHH----HHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCc
Q 017290 99 ADMGGMGFIQ---SNHSVIMYNNTMISFNMLE----ASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA 171 (374)
Q Consensus 99 ~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~----a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~ 171 (374)
+........+ ...+..+.+|+.++..+.+ .+.+.+.+++|++||...+.. ......
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-----------------~~~~~~ 144 (257)
T PRK09291 82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLIT-----------------GPFTGA 144 (257)
T ss_pred CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccC-----------------CCCcch
Confidence 9653211111 1233456778877665544 445566679999999654321 123467
Q ss_pred hHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccC
Q 017290 172 YGLEKLASEELCKHYTKD---FGIECRVGRFHNIYG 204 (374)
Q Consensus 172 y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g 204 (374)
|+.+|...|.+++.+..+ .+++++++||+.+..
T Consensus 145 Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t 180 (257)
T PRK09291 145 YCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLT 180 (257)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccc
Confidence 999999999998877654 589999999998754
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-17 Score=147.96 Aligned_cols=215 Identities=18% Similarity=0.072 Sum_probs=150.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
.+++++||||+|.||+++++.|+++|++|++++|++...... ....+.++.+|+++.+.+..+++ ++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 458999999999999999999999999999998876532211 11246788999999888776663 68
Q ss_pred CEEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|+|||+++........ ....+..+..|+.++..+++++.. .+..++|++||...+..
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------------- 149 (250)
T PRK12939 86 DGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWG---------------- 149 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccC----------------
Confidence 9999999964321111 122344577899999888887654 23349999999655421
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
......|+.+|...|.+++.++.+ .++.+++++||.+..+..... ....+...... ..+...
T Consensus 150 -~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~----~~~~~~~~~~~----------~~~~~~ 214 (250)
T PRK12939 150 -APKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYV----PADERHAYYLK----------GRALER 214 (250)
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCcccccc----CChHHHHHHHh----------cCCCCC
Confidence 123457999999999999988754 479999999998876642110 00012221111 122345
Q ss_pred ceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 242 FTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
+++++|+|++++.++... .++.+.+.++.
T Consensus 215 ~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~ 247 (250)
T PRK12939 215 LQVPDDVAGAVLFLLSDAARFVTGQLLPVNGGF 247 (250)
T ss_pred CCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 789999999999998754 36777777654
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-17 Score=148.22 Aligned_cols=219 Identities=12% Similarity=-0.010 Sum_probs=149.3
Q ss_pred CCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------C
Q 017290 21 YWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 21 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
....++++++||||+|+||+++++.|+++|++|++++|+..+.... ....+.++.+|+.+.+.+..+++ +
T Consensus 5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 84 (255)
T PRK05717 5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGR 84 (255)
T ss_pred CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3344678999999999999999999999999999998875432211 11246788999999887755443 5
Q ss_pred CCEEEEcccccCCc--c---cccCCcceehhhhHHHHHHHHHHHHh---CCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 91 VDHVFNLAADMGGM--G---FIQSNHSVIMYNNTMISFNMLEASRI---SGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 91 ~d~vi~~a~~~~~~--~---~~~~~~~~~~~~n~~~~~~ll~a~~~---~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
+|+|||+|+..... . ....+.+..+++|+.++.++++++.. ....++|++||...+..
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~-------------- 150 (255)
T PRK05717 85 LDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQS-------------- 150 (255)
T ss_pred CCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCC--------------
Confidence 89999999965311 1 11123456788999999999999853 22248999999755421
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh--CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF--GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
......|+.+|...+.+++.++.+. ++++.+++|+.+.++.... .....+.. .... . . ...
T Consensus 151 ---~~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~----~~~~~~~~-~~~~-~---~-----~~~ 213 (255)
T PRK05717 151 ---EPDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQ----RRAEPLSE-ADHA-Q---H-----PAG 213 (255)
T ss_pred ---CCCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcccc----ccchHHHH-HHhh-c---C-----CCC
Confidence 1123579999999999999998775 4889999999998874321 00011111 0000 0 0 112
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.+.+.+|++.++..++... .+.++.+.++.
T Consensus 214 ~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~ 247 (255)
T PRK05717 214 RVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDGGM 247 (255)
T ss_pred CCcCHHHHHHHHHHHcCchhcCccCcEEEECCCc
Confidence 4678999999999888653 25566665543
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-17 Score=148.23 Aligned_cols=202 Identities=15% Similarity=0.069 Sum_probs=139.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCCEEEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVDHVFN 96 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi~ 96 (374)
|+|+||||+|+||.++++.|+++|++|++++|++...... ...++.++.+|+.+.+.+.++++ ++|+|||
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6899999999999999999999999999999986532211 11246788999999888776653 6999999
Q ss_pred cccccCCc----ccccCCcceehhhhHHHHHHHHHH----HHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 97 LAADMGGM----GFIQSNHSVIMYNNTMISFNMLEA----SRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 97 ~a~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~a----~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
+++..... .....+....+++|+.++..++.+ +++.+..++|++||...+. +..+
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------------~~~~ 143 (248)
T PRK10538 81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----------------PYAG 143 (248)
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC-----------------CCCC
Confidence 99864211 112223455688898886555554 4556667999999975431 2234
Q ss_pred CCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeH
Q 017290 169 QDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
...|+.+|...+.+.+.++.+. ++.+.+++||.+.+............ ..... .+ . ...++..
T Consensus 144 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~-~~~~~---------~~-~---~~~~~~~ 209 (248)
T PRK10538 144 GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDD-GKAEK---------TY-Q---NTVALTP 209 (248)
T ss_pred CchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcH-HHHHh---------hc-c---ccCCCCH
Confidence 5689999999999999887653 69999999999986532100000000 00000 00 1 1134689
Q ss_pred HHHHHHHHhhhccC
Q 017290 246 DECVEGVLRLTKSD 259 (374)
Q Consensus 246 ~Dva~~i~~~~~~~ 259 (374)
+|+|++++.++..+
T Consensus 210 ~dvA~~~~~l~~~~ 223 (248)
T PRK10538 210 EDVSEAVWWVATLP 223 (248)
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999988755
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-17 Score=149.27 Aligned_cols=218 Identities=15% Similarity=0.046 Sum_probs=149.6
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
..++++|||||+|+||+++++.|++.|++|++++|+..+.... ....+.++.+|++|.+.+.++++ +
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3568999999999999999999999999999999976432111 11245678999999888865553 5
Q ss_pred CCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhC-----CCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 91 VDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRIS-----GVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~-----~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
+|+|||+|+....... ........++.|+.++..+++++... +..++|++||...+.....
T Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~----------- 158 (259)
T PRK08213 90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP----------- 158 (259)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc-----------
Confidence 8999999986421111 11223446779999999999987554 5569999999765432210
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
...+...|+.+|...|.+++.++++. ++++.+++|+.+-.+.. ...+..+...... ..+ .
T Consensus 159 --~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~-----~~~~~~~~~~~~~-~~~---------~ 221 (259)
T PRK08213 159 --EVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMT-----RGTLERLGEDLLA-HTP---------L 221 (259)
T ss_pred --cccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcch-----hhhhHHHHHHHHh-cCC---------C
Confidence 11244789999999999999997753 68899999998866532 1123333333221 111 1
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
..+...+|++.++..++... .+..+++.++
T Consensus 222 ~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~ 255 (259)
T PRK08213 222 GRLGDDEDLKGAALLLASDASKHITGQILAVDGG 255 (259)
T ss_pred CCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 22446799999988887653 3566666654
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.3e-18 Score=149.82 Aligned_cols=193 Identities=15% Similarity=0.032 Sum_probs=138.9
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-----cccceeEEecccchhhHhhhcc-------CCCE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-----MFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
+|+|+||||+|.||+++++.|+++|++|++++|+........ ..++.++.+|+++.+.+.++++ .+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 579999999999999999999999999999999764322110 0156789999999888877654 4799
Q ss_pred EEEcccccCCcccc----cCCcceehhhhHHHHHHHHH----HHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 94 VFNLAADMGGMGFI----QSNHSVIMYNNTMISFNMLE----ASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 94 vi~~a~~~~~~~~~----~~~~~~~~~~n~~~~~~ll~----a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
+||+++........ ..+.+..+++|+.++..+++ ++++.+..++|++||...+..
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~----------------- 144 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRG----------------- 144 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC-----------------
Confidence 99999965321111 12345568889998888766 455566679999999655321
Q ss_pred CCCCCchHHhHHHHHHHHHHHHh---hhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccc
Q 017290 166 AEPQDAYGLEKLASEELCKHYTK---DFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (374)
......|+.+|...+.+++.++. ..+++++++||+.+.++... .... .. -.+
T Consensus 145 ~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~------------------~~~~---~~----~~~ 199 (257)
T PRK07024 145 LPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTA------------------HNPY---PM----PFL 199 (257)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhh------------------cCCC---CC----CCc
Confidence 12345799999999999988864 35799999999999876310 0000 00 013
Q ss_pred eeHHHHHHHHHhhhccCC
Q 017290 243 TFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~~ 260 (374)
+..+|+++.++.++.+..
T Consensus 200 ~~~~~~a~~~~~~l~~~~ 217 (257)
T PRK07024 200 MDADRFAARAARAIARGR 217 (257)
T ss_pred cCHHHHHHHHHHHHhCCC
Confidence 578999999999887653
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-17 Score=147.92 Aligned_cols=215 Identities=14% Similarity=0.115 Sum_probs=146.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-cc---ccccceeEEecccchhhHhhhcc-------C-C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-TE---DMFCHEFHLVDLRVMDNCLKVTK-------G-V 91 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---~~~~i~~~~~dl~~~~~~~~~~~-------~-~ 91 (374)
.++++++||||+|+||+++++.|++.|++|+++.++..... .. ...++.++.+|+.+.+.+..+++ + +
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i 82 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPI 82 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 35589999999999999999999999999988765432211 00 11246788999999888877664 2 8
Q ss_pred CEEEEcccccCCc---------ccccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCC
Q 017290 92 DHVFNLAADMGGM---------GFIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 92 d~vi~~a~~~~~~---------~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
|++||+|+..... .....+....++.|+.++..+++++. +.+..++|++||.....
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----------- 151 (253)
T PRK08642 83 TTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN----------- 151 (253)
T ss_pred eEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC-----------
Confidence 9999999753110 01112234468889999999988875 34445899999853321
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCC
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
+..+...|+.+|...|.+++.++.+ .++.+..++||.+..+... . .....+... ....
T Consensus 152 ------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~---~-~~~~~~~~~-~~~~-------- 212 (253)
T PRK08642 152 ------PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDAS---A-ATPDEVFDL-IAAT-------- 212 (253)
T ss_pred ------CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhh---c-cCCHHHHHH-HHhc--------
Confidence 2345568999999999999999876 4688999999988654211 0 011111111 1111
Q ss_pred CcccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
.....+.+.+|+++++..++..+ .+..+.+.++
T Consensus 213 -~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg 249 (253)
T PRK08642 213 -TPLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDGG 249 (253)
T ss_pred -CCcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence 11235789999999999988753 3566776654
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-17 Score=147.94 Aligned_cols=207 Identities=15% Similarity=0.064 Sum_probs=140.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhc-------cCCCEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVT-------KGVDHV 94 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~-------~~~d~v 94 (374)
++++++||||+|+||++++++|+++|++|++++|+........ ...+.++.+|+.+.+++..++ .++|+|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4579999999999999999999999999999998754321111 123567889999877665543 368999
Q ss_pred EEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecc-cccCCCcccccccCCCCCCCCCCCC
Q 017290 95 FNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSA-CIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 95 i~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~-~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
||+|+...... +...+.+..+++|+.++..+++++... ...++|++||. ..|+ ...
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~------------------~~~ 146 (249)
T PRK06500 85 FINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIG------------------MPN 146 (249)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccC------------------CCC
Confidence 99998653211 222344567889999999999988642 22367777774 3332 123
Q ss_pred CCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEeeCCCccccccee
Q 017290 169 QDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
...|+.+|...|.+++.++.+. ++++.++||+.++++...... .......+..... ...+ ...+..
T Consensus 147 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~ 216 (249)
T PRK06500 147 SSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQ-ALVP---------LGRFGT 216 (249)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHH-hcCC---------CCCCcC
Confidence 4689999999999998887653 799999999999987321100 0111112222211 1111 112458
Q ss_pred HHHHHHHHHhhhccC
Q 017290 245 IDECVEGVLRLTKSD 259 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~ 259 (374)
.+|+|++++.++..+
T Consensus 217 ~~~va~~~~~l~~~~ 231 (249)
T PRK06500 217 PEEIAKAVLYLASDE 231 (249)
T ss_pred HHHHHHHHHHHcCcc
Confidence 899999999988654
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.7e-17 Score=145.32 Aligned_cols=218 Identities=20% Similarity=0.177 Sum_probs=148.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEEEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHVFN 96 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi~ 96 (374)
.++|++|||||+|.||+++++.|++.|++|++++|+..... .+.++.+|+++.+.+.++++ ++|+|||
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN-----DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC-----ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 45689999999999999999999999999999998865321 46788999999888777664 6899999
Q ss_pred cccccCCcccccC---CcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 97 LAADMGGMGFIQS---NHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 97 ~a~~~~~~~~~~~---~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
+|+........+. +.+..+++|+.++..+++++. +.+..++|++||...+. +....
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------------~~~~~ 141 (258)
T PRK06398 79 NAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA-----------------VTRNA 141 (258)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc-----------------CCCCC
Confidence 9997432112222 234457899999888877764 34456999999976643 22345
Q ss_pred CchHHhHHHHHHHHHHHHhhhC--CcEEEEeeCcccCCCCCCCC-C--CCcHHHHHHHHhccCCceEeeCCCccccccee
Q 017290 170 DAYGLEKLASEELCKHYTKDFG--IECRVGRFHNIYGPFGTWKG-M--EKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~g~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
..|+.+|...+.+.+.++.+.+ +.+.+++||.+-.+...... . .... ........ .+........+..
T Consensus 142 ~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~ 214 (258)
T PRK06398 142 AAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDP-EHVERKIR------EWGEMHPMKRVGK 214 (258)
T ss_pred chhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCCh-hhhHHHHH------hhhhcCCcCCCcC
Confidence 6899999999999999987643 88899999988654211000 0 0000 00000000 0011112234678
Q ss_pred HHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 245 IDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.+|+|++++.++... .+.++.+.++.
T Consensus 215 p~eva~~~~~l~s~~~~~~~G~~i~~dgg~ 244 (258)
T PRK06398 215 PEEVAYVVAFLASDLASFITGECVTVDGGL 244 (258)
T ss_pred HHHHHHHHHHHcCcccCCCCCcEEEECCcc
Confidence 899999999988653 35566666553
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.5e-18 Score=151.68 Aligned_cols=227 Identities=15% Similarity=0.034 Sum_probs=151.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc-------CC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
..+|++|||||+|.||++++++|+++|++|++++|+....... ...++.++.+|++|.+.+.++++ ++
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i 95 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL 95 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 4568999999999999999999999999999999875421110 11246789999999988877765 68
Q ss_pred CEEEEcccccCCc--c---cccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccc-cCCCcccccccCCCCC
Q 017290 92 DHVFNLAADMGGM--G---FIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACI-YPEFKQLETNVSLKES 161 (374)
Q Consensus 92 d~vi~~a~~~~~~--~---~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~v-y~~~~~~~~~~~~~e~ 161 (374)
|+|||+|+..... . ....+....+++|+.++..+++++.. .+..++|++||... ++.
T Consensus 96 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------- 162 (280)
T PLN02253 96 DIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG------------- 162 (280)
T ss_pred CEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC-------------
Confidence 9999999964311 1 11223456788999999998887653 23347899888543 221
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
.....|+.+|...|.+++.++.+. ++.+.+++|+.+..+...... ........+..... ......
T Consensus 163 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 231 (280)
T PLN02253 163 -----LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRA------FAGKNA 231 (280)
T ss_pred -----CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHH------HhhcCC
Confidence 122479999999999999988764 699999999999775321100 00001111111000 000000
Q ss_pred c-cccceeHHHHHHHHHhhhccC----CCCcEEecCCCccCH
Q 017290 238 Q-TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSM 274 (374)
Q Consensus 238 ~-~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s~ 274 (374)
. ....++.+|+|.+++.++... .+..+++.++...+.
T Consensus 232 ~l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~ 273 (280)
T PLN02253 232 NLKGVELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCTN 273 (280)
T ss_pred CCcCCCCCHHHHHHHHHhhcCcccccccCcEEEECCchhhcc
Confidence 0 123478999999999988654 367788877654443
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.9e-17 Score=145.77 Aligned_cols=215 Identities=14% Similarity=0.049 Sum_probs=148.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc----cccccceeEEecccchhhHhhhcc-------CCC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT----EDMFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
.++++||||||+|.||.+++++|+++|++|++++|+...... .....+.++.+|+++.+.+..+++ ++|
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467899999999999999999999999999999987522110 011246788999999888875553 689
Q ss_pred EEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
++||+++........ ..+.+..+++|+.+...+++++.. .+ ..++|++||...|...
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------------- 147 (248)
T TIGR01832 83 ILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG--------------- 147 (248)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC---------------
Confidence 999999975321111 223455688999998888887643 33 3589999998766421
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
.....|+.+|...+.+++.++.+. ++++++++||.+..+..... ... ......... . .....
T Consensus 148 --~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~--~~~-~~~~~~~~~---~-------~~~~~ 212 (248)
T TIGR01832 148 --IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQAL--RAD-EDRNAAILE---R-------IPAGR 212 (248)
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhcc--ccC-hHHHHHHHh---c-------CCCCC
Confidence 123479999999999999998764 79999999999987632100 000 001011111 0 11246
Q ss_pred ceeHHHHHHHHHhhhccCC----CCcEEecC
Q 017290 242 FTFIDECVEGVLRLTKSDF----REPVNIGS 268 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~~----~~~~~i~~ 268 (374)
++..+|+|++++.++.... +.++.+.+
T Consensus 213 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 243 (248)
T TIGR01832 213 WGTPDDIGGPAVFLASSASDYVNGYTLAVDG 243 (248)
T ss_pred CcCHHHHHHHHHHHcCccccCcCCcEEEeCC
Confidence 8899999999999987532 44445444
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-17 Score=145.42 Aligned_cols=211 Identities=15% Similarity=0.118 Sum_probs=145.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc------CCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK------GVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~------~~d~vi~~a 98 (374)
..|+||||||+|+||+++++.|+++|++|++++|++.... ..+++.+|+.+.+.+.++++ ++|+|||++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 76 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDF-----PGELFACDLADIEQTAATLAQINEIHPVDAIVNNV 76 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccccc-----CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence 3578999999999999999999999999999999876421 22678899999888776665 689999999
Q ss_pred cccCCcccc---cCCcceehhhhHHHHHHHHHH----HHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCc
Q 017290 99 ADMGGMGFI---QSNHSVIMYNNTMISFNMLEA----SRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA 171 (374)
Q Consensus 99 ~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a----~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~ 171 (374)
+......+. ..+....++.|+.++..+..+ +++.+..++|++||..+|+. .....
T Consensus 77 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------------~~~~~ 138 (234)
T PRK07577 77 GIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGA------------------LDRTS 138 (234)
T ss_pred CCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCC------------------CCchH
Confidence 975422111 123344577788877666554 45566679999999876542 12357
Q ss_pred hHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHH
Q 017290 172 YGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 248 (374)
Q Consensus 172 y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 248 (374)
|+.+|...|.+++.++.+ .++.++++||+.+..+..... ............. .. ..-.+...+|+
T Consensus 139 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~-~~---------~~~~~~~~~~~ 206 (234)
T PRK07577 139 YSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQT--RPVGSEEEKRVLA-SI---------PMRRLGTPEEV 206 (234)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccc--cccchhHHHHHhh-cC---------CCCCCcCHHHH
Confidence 999999999998887654 489999999999987642110 0000111111111 00 11124578999
Q ss_pred HHHHHhhhccC----CCCcEEecCCC
Q 017290 249 VEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 249 a~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
|.+++.++..+ .+..+.+.++.
T Consensus 207 a~~~~~l~~~~~~~~~g~~~~~~g~~ 232 (234)
T PRK07577 207 AAAIAFLLSDDAGFITGQVLGVDGGG 232 (234)
T ss_pred HHHHHHHhCcccCCccceEEEecCCc
Confidence 99999998764 25666666543
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-17 Score=146.81 Aligned_cols=213 Identities=14% Similarity=0.065 Sum_probs=144.1
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-cc------ccccceeEEecccchhhHhhhcc-------CC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-TE------DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
++.+|||||+|+||++++++|+++|+.|++..++..... .. ....+.++.+|+++.+.+.++++ ++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 367999999999999999999999999887764432111 00 11235678999999888877765 68
Q ss_pred CEEEEcccccCCc-cc---ccCCcceehhhhHHHHHHHHHHHHhC------C-CCeEEEeecccc-cCCCcccccccCCC
Q 017290 92 DHVFNLAADMGGM-GF---IQSNHSVIMYNNTMISFNMLEASRIS------G-VKRFFYASSACI-YPEFKQLETNVSLK 159 (374)
Q Consensus 92 d~vi~~a~~~~~~-~~---~~~~~~~~~~~n~~~~~~ll~a~~~~------~-~~~~i~~Ss~~v-y~~~~~~~~~~~~~ 159 (374)
|+|||+++..... .. ...+....+++|+.++..+++++.+. + -.++|++||... ++..
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------- 151 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP---------- 151 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC----------
Confidence 9999999975321 11 11223456889999998888876542 1 126999999654 3210
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
.....|+.+|...|.+++.++.+. +++++++||+.++++.... .....++.. .....+
T Consensus 152 -------~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~----~~~~~~~~~-~~~~~p------- 212 (248)
T PRK06123 152 -------GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHAS----GGEPGRVDR-VKAGIP------- 212 (248)
T ss_pred -------CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhc----cCCHHHHHH-HHhcCC-------
Confidence 111359999999999999887664 7999999999999984321 111222222 111111
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
...+.+++|++++++.++... .+..|++.++
T Consensus 213 --~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 213 --MGRGGTAEEVARAILWLLSDEASYTTGTFIDVSGG 247 (248)
T ss_pred --CCCCcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence 112357899999999988653 3677888754
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.9e-17 Score=153.84 Aligned_cols=249 Identities=15% Similarity=0.066 Sum_probs=174.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC---CEEEEEeCCCCccccc---------------------ccccceeEEecccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG---HYIIASDWKKNEHMTE---------------------DMFCHEFHLVDLRV 80 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~---------------------~~~~i~~~~~dl~~ 80 (374)
..++|||||||||+|.-+++.|+..- ..++.+.|.+...... ...++..+.||+++
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~ 90 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE 90 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence 46899999999999999999999863 3788888877532110 11356778888876
Q ss_pred hh------hHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CCeEEEeecccccCCCcccc
Q 017290 81 MD------NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRFFYASSACIYPEFKQLE 153 (374)
Q Consensus 81 ~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~vy~~~~~~~ 153 (374)
++ ++..+.+.+++|||+|+.+.. .+.......+|..|+.++++.|++.. .+-++++||+++.......+
T Consensus 91 ~~LGis~~D~~~l~~eV~ivih~AAtvrF----de~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~ 166 (467)
T KOG1221|consen 91 PDLGISESDLRTLADEVNIVIHSAATVRF----DEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIE 166 (467)
T ss_pred cccCCChHHHHHHHhcCCEEEEeeeeecc----chhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccccc
Confidence 43 444456789999999997642 22445677889999999999999865 77999999988873222111
Q ss_pred cccCCCCCC--CCC----------------------CCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCC
Q 017290 154 TNVSLKESD--AWP----------------------AEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTW 209 (374)
Q Consensus 154 ~~~~~~e~~--~~~----------------------~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~ 209 (374)
+.++++.. ++. ....+.|.-+|+.+|..+.+++ .++|.+|+||+.|.+....+
T Consensus 167 -E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~EP 243 (467)
T KOG1221|consen 167 -EKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYKEP 243 (467)
T ss_pred -ccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceeccccCC
Confidence 11111111 000 1234679999999999999977 46999999999999875432
Q ss_pred CCCCCcHHHHHHHHh---------ccCCceEeeCCCcccccceeHHHHHHHHHhhhcc-----C--CCCcEEecCC--Cc
Q 017290 210 KGMEKAPAAFCRKAL---------TSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS-----D--FREPVNIGSD--EM 271 (374)
Q Consensus 210 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~-----~--~~~~~~i~~~--~~ 271 (374)
++.|+.... -.|.--.+..+.+...++|.++.++++++.+.-. . ...+||++++ .+
T Consensus 244 ------~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np 317 (467)
T KOG1221|consen 244 ------FPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNP 317 (467)
T ss_pred ------CCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCc
Confidence 223332221 0111123445777888999999999999876522 1 1458999876 58
Q ss_pred cCHHHHHHHHHHhcC
Q 017290 272 VSMNEMAEIVLSFED 286 (374)
Q Consensus 272 ~s~~e~~~~i~~~~g 286 (374)
++|.++.+.......
T Consensus 318 ~t~~~~~e~~~~~~~ 332 (467)
T KOG1221|consen 318 VTWGDFIELALRYFE 332 (467)
T ss_pred ccHHHHHHHHHHhcc
Confidence 999999999988764
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-17 Score=147.23 Aligned_cols=198 Identities=15% Similarity=0.066 Sum_probs=141.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
+|+++|||||+|.||++++++|+++|++|++++|++...... ...++.++.+|+++.+.+..+++ ++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 568899999999999999999999999999999986532211 11246788999999887766654 58
Q ss_pred CEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|+|||+++....... ...+.+..+.+|+.++..+++++ ++.+..++|++||...+..
T Consensus 85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------------- 148 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNA---------------- 148 (241)
T ss_pred CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcC----------------
Confidence 999999986432111 11233445778888877766654 4455568999999877642
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
......|+.+|...+.+.+.++.+ .+++++++||+.+-.+.... . . .. .......
T Consensus 149 -~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~----~-------------~-~~---~~~~~~~ 206 (241)
T PRK07454 149 -FPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT----E-------------T-VQ---ADFDRSA 206 (241)
T ss_pred -CCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccc----c-------------c-cc---ccccccc
Confidence 223467999999999998887643 47999999999987653110 0 0 00 0001123
Q ss_pred ceeHHHHHHHHHhhhccCC
Q 017290 242 FTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~~ 260 (374)
++..+|+|++++.++..+.
T Consensus 207 ~~~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 207 MLSPEQVAQTILHLAQLPP 225 (241)
T ss_pred CCCHHHHHHHHHHHHcCCc
Confidence 5789999999999998774
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.6e-17 Score=143.47 Aligned_cols=206 Identities=15% Similarity=0.052 Sum_probs=144.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-----cccceeEEecccchhhHhhhcc-------CCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-----MFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
++++|+||||+|+||++++++|++.|++|++++|++....... ...+.++.+|+.+.+.+..+++ ++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4588999999999999999999999999999999864322110 1346788999999888776664 789
Q ss_pred EEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHh---CCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 93 HVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRI---SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 93 ~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~---~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
+|||+++....... ...+.+..+++|+.++..+++++.. .+..++|++||...+. +.
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------------~~ 147 (237)
T PRK07326 85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN-----------------FF 147 (237)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc-----------------CC
Confidence 99999986432111 1122345688899998888887653 2445899999975432 22
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
.....|..+|...+.+.+.+..+ .+++++++||+.+..+..... . .. .....+
T Consensus 148 ~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~------------------~----~~--~~~~~~ 203 (237)
T PRK07326 148 AGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT------------------P----SE--KDAWKI 203 (237)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc------------------c----ch--hhhccC
Confidence 33467999999999988887543 479999999999876532100 0 00 000136
Q ss_pred eHHHHHHHHHhhhccCC---CCcEEecCCCc
Q 017290 244 FIDECVEGVLRLTKSDF---REPVNIGSDEM 271 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~~---~~~~~i~~~~~ 271 (374)
..+|+++.++.++..+. .+...+.++.+
T Consensus 204 ~~~d~a~~~~~~l~~~~~~~~~~~~~~~~~~ 234 (237)
T PRK07326 204 QPEDIAQLVLDLLKMPPRTLPSKIEVRPSRP 234 (237)
T ss_pred CHHHHHHHHHHHHhCCccccccceEEecCCC
Confidence 78999999999998764 34455544443
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.3e-17 Score=145.72 Aligned_cols=224 Identities=16% Similarity=0.106 Sum_probs=149.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhc-------cCCCEEEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT-------KGVDHVFN 96 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~-------~~~d~vi~ 96 (374)
..+++||||||+|.||+++++.|.++|++|++++|+..... ...+.++.+|+.+.+.+.+++ .++|+|||
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 83 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL---PEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH 83 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc---CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 45689999999999999999999999999999999865422 224678899999988776544 36899999
Q ss_pred cccccCCc-----ccccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 97 LAADMGGM-----GFIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 97 ~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
+|+..... .....+.+..+++|+.++..+++++ ++.+..++|++||...+.. ...
T Consensus 84 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~----------------~~~ 147 (260)
T PRK06523 84 VLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP----------------LPE 147 (260)
T ss_pred CCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC----------------CCC
Confidence 99853210 1222334556788998887775544 4455568999999765421 112
Q ss_pred CCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCC------CCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 168 PQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKG------MEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
+...|+.+|...+.+++.++.+ .++++.+++||.+..+...... ............+... .+..
T Consensus 148 ~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~p 220 (260)
T PRK06523 148 STTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSL-------GGIP 220 (260)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHh-------ccCc
Confidence 3568999999999999988765 4799999999999876421000 0000000000000000 0011
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
...+...+|++.++..++... .+..+.+.++...+
T Consensus 221 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 221 LGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT 259 (260)
T ss_pred cCCCCCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence 223567899999999988753 36778887765544
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=9e-17 Score=141.44 Aligned_cols=213 Identities=17% Similarity=0.120 Sum_probs=147.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccch-hhHhhhccCCCEEEEcccccC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVM-DNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~-~~~~~~~~~~d~vi~~a~~~~ 102 (374)
.++++++||||+|+||+++++.|+++|++|++++|++.... ..++.++.+|+.+. +.+.+.+.++|+|||+|+...
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~ 79 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL---SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILD 79 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc---CCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCC
Confidence 45689999999999999999999999999999998865422 23467888999886 444455568999999998642
Q ss_pred C----cccccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHH
Q 017290 103 G----MGFIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGL 174 (374)
Q Consensus 103 ~----~~~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~ 174 (374)
. ......+.+..+.+|+.++.++++++.. .+..++|++||...+.. ......|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------------~~~~~~Y~~ 142 (235)
T PRK06550 80 DYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVA-----------------GGGGAAYTA 142 (235)
T ss_pred CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccC-----------------CCCCcccHH
Confidence 1 1122233455788999999888887643 34458999999765421 123357999
Q ss_pred hHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHH
Q 017290 175 EKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG 251 (374)
Q Consensus 175 sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 251 (374)
+|...+.+++.++.+. ++++++++|+.+..+.... ......+.... ... .....+...+|+|.+
T Consensus 143 sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~---~~~~~~~~~~~-~~~---------~~~~~~~~~~~~a~~ 209 (235)
T PRK06550 143 SKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAA---DFEPGGLADWV-ARE---------TPIKRWAEPEEVAEL 209 (235)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCccccc---ccCchHHHHHH-hcc---------CCcCCCCCHHHHHHH
Confidence 9999999988887654 7999999999998764211 00011111111 111 112346788999999
Q ss_pred HHhhhccC----CCCcEEecCC
Q 017290 252 VLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 252 i~~~~~~~----~~~~~~i~~~ 269 (374)
++.++... .+.++.+.++
T Consensus 210 ~~~l~s~~~~~~~g~~~~~~gg 231 (235)
T PRK06550 210 TLFLASGKADYMQGTIVPIDGG 231 (235)
T ss_pred HHHHcChhhccCCCcEEEECCc
Confidence 99998653 3556666654
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.9e-18 Score=149.71 Aligned_cols=221 Identities=16% Similarity=0.102 Sum_probs=149.1
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc-------C
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
++.++++|||||+|.||++++++|+++|++|++++|++...... ...++.++.+|+++.+.+..+++ +
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGR 83 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 45668999999999999999999999999999999887543100 11246789999999888877664 6
Q ss_pred CCEEEEcccccCCccc--ccCCcceehhhhHHHHHHHHHHHHh---CCCCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGF--IQSNHSVIMYNNTMISFNMLEASRI---SGVKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~---~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
+|+|||+++....... ...+.+..++.|+.+...+.+++.. .+..++|++||...+. +
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------------~ 146 (258)
T PRK08628 84 IDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALT-----------------G 146 (258)
T ss_pred CCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhcc-----------------C
Confidence 8999999996432111 1123345677888888888777643 2235899999976542 1
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
..+...|+.+|...|.+++.++.+ .++++..++|+.++++...... .............. .++. ...
T Consensus 147 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---~~~~------~~~ 217 (258)
T PRK08628 147 QGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITA---KIPL------GHR 217 (258)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHh---cCCc------ccc
Confidence 224568999999999999998754 4799999999999987421000 00000001111110 0000 124
Q ss_pred ceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 242 FTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
++..+|+|++++.++... .+..+.+.++
T Consensus 218 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg 249 (258)
T PRK08628 218 MTTAEEIADTAVFLLSERSSHTTGQWLFVDGG 249 (258)
T ss_pred CCCHHHHHHHHHHHhChhhccccCceEEecCC
Confidence 678899999999988754 2556666544
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.4e-17 Score=146.91 Aligned_cols=219 Identities=15% Similarity=0.053 Sum_probs=151.3
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc---cccccceeEEecccchhhHhhhcc-------CC
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT---EDMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
++..+++||||||+|+||+++++.|+++|++|++++|+...... .....+.++.+|+++.+.+..+++ ++
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 90 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRI 90 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 34567899999999999999999999999999999997642111 111234688899999887776654 67
Q ss_pred CEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|+|||+++....... ...+....+.+|+.++.++++++.. .+..++|++||.....
T Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------------- 153 (255)
T PRK06841 91 DILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVV----------------- 153 (255)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhcc-----------------
Confidence 999999996532111 1123344688899999999888754 3556999999965421
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
+......|+.+|...+.+++.++.+ .++.+..++|+.+..+..... .. ...... .. .......
T Consensus 154 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~-~~---~~~~~~-~~---------~~~~~~~ 219 (255)
T PRK06841 154 ALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKA-WA---GEKGER-AK---------KLIPAGR 219 (255)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccc-cc---hhHHHH-HH---------hcCCCCC
Confidence 1123357999999999999888765 479999999999987642100 00 001111 11 0111235
Q ss_pred ceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 242 FTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+.+.+|++++++.++..+ .+.++.+.++..
T Consensus 220 ~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg~~ 253 (255)
T PRK06841 220 FAYPEEIAAAALFLASDAAAMITGENLVIDGGYT 253 (255)
T ss_pred CcCHHHHHHHHHHHcCccccCccCCEEEECCCcc
Confidence 789999999999998764 356677776543
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.6e-17 Score=144.60 Aligned_cols=221 Identities=14% Similarity=0.026 Sum_probs=147.2
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-ccccccceeEEecccchhhHhhhcc-------CCCEEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-TEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHVF 95 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi 95 (374)
..+|+++||||+|.||+++++.|++.|++|+++.++..... .....++.++.+|+++.+.+.++++ ++|+||
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 35689999999999999999999999999998876543211 1111246788999999988877664 689999
Q ss_pred EcccccCCccc---ccCCcceehhhhHHHHHHHH----HHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 96 NLAADMGGMGF---IQSNHSVIMYNNTMISFNML----EASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 96 ~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll----~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
|||+....... ...+....+++|+.++..++ ..+++.+..++|++||...++. +...
T Consensus 85 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~----------------~~~~ 148 (255)
T PRK06463 85 NNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGT----------------AAEG 148 (255)
T ss_pred ECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCC----------------CCCC
Confidence 99987432111 22234456788999865554 4444455569999999876532 1123
Q ss_pred CCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeH
Q 017290 169 QDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
...|+.+|...+.+++.++.+ .++++.+++|+.+-.+.............+ ...... ......+...
T Consensus 149 ~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~~ 218 (255)
T PRK06463 149 TTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKL-RELFRN---------KTVLKTTGKP 218 (255)
T ss_pred ccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHH-HHHHHh---------CCCcCCCcCH
Confidence 357999999999999999865 479999999998854421100000000111 111111 1122345788
Q ss_pred HHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 246 DECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 246 ~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
+|++.+++.++... .+..+.+.++.
T Consensus 219 ~~va~~~~~l~s~~~~~~~G~~~~~dgg~ 247 (255)
T PRK06463 219 EDIANIVLFLASDDARYITGQVIVADGGR 247 (255)
T ss_pred HHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence 99999999998754 25667776654
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.2e-17 Score=143.32 Aligned_cols=197 Identities=16% Similarity=0.077 Sum_probs=142.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
.+++++||||+|+||.+++++|+++|++|++++|++...... ....+.++.+|+++.+.+..+++ ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 457899999999999999999999999999999986432111 11246788999999988877765 78
Q ss_pred CEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|+|||+++........+ .+....++.|+.++..+++++. +.+.+++|++||...+..
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~---------------- 149 (239)
T PRK07666 86 DILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKG---------------- 149 (239)
T ss_pred cEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccC----------------
Confidence 99999998643211111 2234567889998888887765 345668999999765432
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
..+...|+.+|...+.+++.++.+ .+++++++||+.+..+.... . .... +. ...
T Consensus 150 -~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~---------~---~~~~-------~~---~~~ 206 (239)
T PRK07666 150 -AAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVD---------L---GLTD-------GN---PDK 206 (239)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhh---------c---cccc-------cC---CCC
Confidence 223457999999999998887654 47999999999998763210 0 0000 11 123
Q ss_pred ceeHHHHHHHHHhhhccCC
Q 017290 242 FTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~~ 260 (374)
++..+|+|+++..++.++.
T Consensus 207 ~~~~~~~a~~~~~~l~~~~ 225 (239)
T PRK07666 207 VMQPEDLAEFIVAQLKLNK 225 (239)
T ss_pred CCCHHHHHHHHHHHHhCCC
Confidence 5788999999999998764
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-17 Score=153.84 Aligned_cols=182 Identities=15% Similarity=0.084 Sum_probs=127.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc------cccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT------EDMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
..+++|+||||+|+||.++++.|+++|++|++++|+..+... .....+.++.+|+.+.+.+..+++ +
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 356889999999999999999999999999999987643211 111246788999999988877664 4
Q ss_pred CCEEEEcccccCCc----ccccCCcceehhhhHHHHHHHHHHHHh----CC--CCeEEEeecccccCCCcc----ccccc
Q 017290 91 VDHVFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMLEASRI----SG--VKRFFYASSACIYPEFKQ----LETNV 156 (374)
Q Consensus 91 ~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~a~~~----~~--~~~~i~~Ss~~vy~~~~~----~~~~~ 156 (374)
+|+|||+|+..... .......+..+.+|+.++..+++++.. .+ ..|+|++||...+..... .+...
T Consensus 84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~ 163 (322)
T PRK07453 84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPA 163 (322)
T ss_pred ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCcc
Confidence 89999999964321 112234566788999998888877653 32 249999999766432100 00000
Q ss_pred --------------CCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh----CCcEEEEeeCcccCC
Q 017290 157 --------------SLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF----GIECRVGRFHNIYGP 205 (374)
Q Consensus 157 --------------~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~v~g~ 205 (374)
++...+..+..|...|+.||+..+.+++.++++. ++.++++|||.|++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 230 (322)
T PRK07453 164 DLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT 230 (322)
T ss_pred chhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence 0000011134567889999999888888877654 699999999999864
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.6e-17 Score=146.28 Aligned_cols=216 Identities=14% Similarity=0.002 Sum_probs=149.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc--cc------ccccceeEEecccchhhHhhhcc-------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM--TE------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
..+++|||||+|.||+++++.|+++|++|+++.|+..... .. ....+.++.+|+++.+.+.++++
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4579999999999999999999999999998876543211 00 11235678899999887766553
Q ss_pred CCCEEEEcccccCC----cccccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 90 GVDHVFNLAADMGG----MGFIQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 90 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
++|++||+|+.... ......+....+++|+.++..+++++... .-.++|++||...+...
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~-------------- 193 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS-------------- 193 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC--------------
Confidence 68999999985321 11223345667889999999999887642 12489999998776421
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
.....|+.+|...+.+++.++.+ .++++.+++|+.+.++..... ............ . ....
T Consensus 194 ---~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~---~~~~~~~~~~~~-~---------~~~~ 257 (294)
T PRK07985 194 ---PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG---GQTQDKIPQFGQ-Q---------TPMK 257 (294)
T ss_pred ---CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccccccc---CCCHHHHHHHhc-c---------CCCC
Confidence 12357999999999999998876 489999999999998742100 001111111111 1 1122
Q ss_pred cceeHHHHHHHHHhhhccCC----CCcEEecCCC
Q 017290 241 SFTFIDECVEGVLRLTKSDF----REPVNIGSDE 270 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~~----~~~~~i~~~~ 270 (374)
.+...+|+|.+++.++..+. +.++.+.++.
T Consensus 258 r~~~pedva~~~~fL~s~~~~~itG~~i~vdgG~ 291 (294)
T PRK07985 258 RAGQPAELAPVYVYLASQESSYVTAEVHGVCGGE 291 (294)
T ss_pred CCCCHHHHHHHHHhhhChhcCCccccEEeeCCCe
Confidence 35678999999999987642 5667776654
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.5e-17 Score=144.54 Aligned_cols=197 Identities=14% Similarity=0.011 Sum_probs=142.6
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc--cccceeEEecccchhhHhhhcc----CCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED--MFCHEFHLVDLRVMDNCLKVTK----GVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~i~~~~~dl~~~~~~~~~~~----~~d~vi~~a~ 99 (374)
|++++||||+|+||+++++.|+++|++|++++|++....... ...+.++.+|+++.+++.++++ .+|.+||+|+
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag 80 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG 80 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence 478999999999999999999999999999999865422211 1246788999999999888876 3689999998
Q ss_pred ccCCccccc---CCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHH
Q 017290 100 DMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGL 174 (374)
Q Consensus 100 ~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~ 174 (374)
........+ .+.+..+++|+.++.++++++... ...++|++||..... +......|+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~-----------------~~~~~~~Y~a 143 (240)
T PRK06101 81 DCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL-----------------ALPRAEAYGA 143 (240)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc-----------------CCCCCchhhH
Confidence 543211111 123456889999999999988752 234799998854211 1123458999
Q ss_pred hHHHHHHHHHHHHh---hhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHH
Q 017290 175 EKLASEELCKHYTK---DFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG 251 (374)
Q Consensus 175 sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 251 (374)
+|...+.+++.++. ..+++++++||+.++++.... .... . ...+..+|+|+.
T Consensus 144 sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~------------------~~~~---~----~~~~~~~~~a~~ 198 (240)
T PRK06101 144 SKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDK------------------NTFA---M----PMIITVEQASQE 198 (240)
T ss_pred HHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCC------------------CCCC---C----CcccCHHHHHHH
Confidence 99999999988874 357999999999998764210 0000 0 013688999999
Q ss_pred HHhhhccCCCCcE
Q 017290 252 VLRLTKSDFREPV 264 (374)
Q Consensus 252 i~~~~~~~~~~~~ 264 (374)
++..++.....+|
T Consensus 199 i~~~i~~~~~~~~ 211 (240)
T PRK06101 199 IRAQLARGKSHIY 211 (240)
T ss_pred HHHHHhcCCCEEE
Confidence 9999988655554
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.5e-17 Score=146.16 Aligned_cols=199 Identities=13% Similarity=-0.008 Sum_probs=141.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-c-ccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-M-FCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~-~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
+++++++||||+|.||++++++|+++|++|++++|++....... . ..+.++.+|+++.+.+.++++ ++|++
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45689999999999999999999999999999998765432111 1 136788999999887665543 68999
Q ss_pred EEcccccCCccccc---CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 95 FNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 95 i~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
||+||......... ......+++|+.++..+++++ .+.+..++|++||...+. +..
T Consensus 83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------------~~~ 145 (273)
T PRK07825 83 VNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKI-----------------PVP 145 (273)
T ss_pred EECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccC-----------------CCC
Confidence 99999754221222 123446778988877766554 456667999999976542 122
Q ss_pred CCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccccee
Q 017290 168 PQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
....|+.+|...+.+.+.+..+ .++++++++|+.+-.+.. . +. .......++.
T Consensus 146 ~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~-------------~-----~~------~~~~~~~~~~ 201 (273)
T PRK07825 146 GMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELI-------------A-----GT------GGAKGFKNVE 201 (273)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhh-------------c-----cc------ccccCCCCCC
Confidence 3468999999888887776544 479999999998754321 0 00 0011235789
Q ss_pred HHHHHHHHHhhhccCCCCc
Q 017290 245 IDECVEGVLRLTKSDFREP 263 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~~~~~ 263 (374)
.+|+|++++.++.++...+
T Consensus 202 ~~~va~~~~~~l~~~~~~~ 220 (273)
T PRK07825 202 PEDVAAAIVGTVAKPRPEV 220 (273)
T ss_pred HHHHHHHHHHHHhCCCCEE
Confidence 9999999999998765433
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-16 Score=141.34 Aligned_cols=214 Identities=20% Similarity=0.150 Sum_probs=148.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc-------CC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
+++++||||+|+||+++++.|+++|++|++++|+...... .....+.++.+|+.+.+.+.++++ ++
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999999988531110 112246788999999888776654 58
Q ss_pred CEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHH----HHHhCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLE----ASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~----a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|+|||+++....... .....+..++.|+.++.++.. .+++.+..++|++||...+..
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~---------------- 145 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKG---------------- 145 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccC----------------
Confidence 999999996532111 122334567789988877754 445556679999999766532
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
......|..+|...+.+++.++.+ .++++++++|+.+.++.... ....+...... .. ....
T Consensus 146 -~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~-----~~~~~~~~~~~-~~---------~~~~ 209 (245)
T PRK12824 146 -QFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQ-----MGPEVLQSIVN-QI---------PMKR 209 (245)
T ss_pred -CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhh-----cCHHHHHHHHh-cC---------CCCC
Confidence 123457999999999988888653 47999999999998764221 11122221111 11 1223
Q ss_pred ceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 242 FTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+...+|+++++..++... .++.+++.++..
T Consensus 210 ~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~g~~ 243 (245)
T PRK12824 210 LGTPEEIAAAVAFLVSEAAGFITGETISINGGLY 243 (245)
T ss_pred CCCHHHHHHHHHHHcCccccCccCcEEEECCCee
Confidence 557899999998888653 378888887754
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.4e-17 Score=145.16 Aligned_cols=213 Identities=13% Similarity=-0.002 Sum_probs=139.9
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEE-eCCCCccccc------ccccceeEEecccchhhHhhhcc-------CC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIAS-DWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
|++++||||+|+||+++++.|+++|++|+++ .|+....... ....+.++.+|+.|.+.+.++++ ++
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999999999875 4543321111 01235778999999988877665 56
Q ss_pred CEEEEcccccCCccc----ccCCcceehhhhHHHHHHHHHHHHhC-------CCCeEEEeecccccCCCcccccccCCCC
Q 017290 92 DHVFNLAADMGGMGF----IQSNHSVIMYNNTMISFNMLEASRIS-------GVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 92 d~vi~~a~~~~~~~~----~~~~~~~~~~~n~~~~~~ll~a~~~~-------~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
|+|||+++....... ...+....+..|+.++..+++++... ...+||++||...+...
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~----------- 149 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA----------- 149 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC-----------
Confidence 899999996422111 11123356788999887777655332 12379999997553211
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+.....|+.+|...+.+++.++.+ .+++++++||+.++++..... .. ..+..... ...+.
T Consensus 150 -----~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~---~~-~~~~~~~~-~~~~~------- 212 (247)
T PRK09730 150 -----PGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASG---GE-PGRVDRVK-SNIPM------- 212 (247)
T ss_pred -----CCcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccC---CC-HHHHHHHH-hcCCC-------
Confidence 011236999999999998887654 479999999999999853211 11 12222211 11111
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGS 268 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~ 268 (374)
....+.+|+|++++.++... .+..+.+.+
T Consensus 213 --~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g 245 (247)
T PRK09730 213 --QRGGQPEEVAQAIVWLLSDKASYVTGSFIDLAG 245 (247)
T ss_pred --CCCcCHHHHHHHHHhhcChhhcCccCcEEecCC
Confidence 11247899999999988754 245566554
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.5e-17 Score=164.90 Aligned_cols=225 Identities=16% Similarity=0.096 Sum_probs=155.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc-----ccceeEEecccchhhHhhhcc-------CCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM-----FCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
.+++||||||+|+||+++++.|++.|++|++++|+......... ..+.++.+|+++.+.+..+++ ++|
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD 500 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD 500 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 55899999999999999999999999999999998754221111 256788999999888776664 689
Q ss_pred EEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH----hCCC-CeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 93 HVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISGV-KRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 93 ~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~-~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
+|||+|+....... ........+.+|+.++..+++++. +.+. .+||++||...+.
T Consensus 501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~----------------- 563 (681)
T PRK08324 501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVN----------------- 563 (681)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccC-----------------
Confidence 99999996532111 122334567889999988877664 4443 5899999976542
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCccc-CCCCCCCCCCCcHHHHHHHHhccCCce----EeeCCC
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIY-GPFGTWKGMEKAPAAFCRKALTSTDKF----EMWGDG 236 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~-g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 236 (374)
+......|+.+|...+.+++.++.+. ++++.+++|+.+| +.... .... ........+... ..+..+
T Consensus 564 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~----~~~~--~~~~~~~~g~~~~~~~~~~~~~ 637 (681)
T PRK08324 564 PGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIW----TGEW--IEARAAAYGLSEEELEEFYRAR 637 (681)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccc----cchh--hhhhhhhccCChHHHHHHHHhc
Confidence 11234689999999999999997654 5999999999998 44211 0000 000000001110 122344
Q ss_pred cccccceeHHHHHHHHHhhhcc--C--CCCcEEecCCCcc
Q 017290 237 LQTRSFTFIDECVEGVLRLTKS--D--FREPVNIGSDEMV 272 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~--~--~~~~~~i~~~~~~ 272 (374)
.....+++.+|+|++++.++.. . .+.+++++++...
T Consensus 638 ~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~ 677 (681)
T PRK08324 638 NLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNAA 677 (681)
T ss_pred CCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECCCchh
Confidence 5567899999999999998842 2 3678999877543
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.5e-16 Score=127.43 Aligned_cols=201 Identities=14% Similarity=0.082 Sum_probs=147.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGF 106 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~ 106 (374)
|||.|+||||.+|+.|+++++++||+|+++.|++++.... .++.+++.|+.|.+.+.+.+.+.|+||..-+..
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~----- 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--QGVTILQKDIFDLTSLASDLAGHDAVISAFGAG----- 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--ccceeecccccChhhhHhhhcCCceEEEeccCC-----
Confidence 7899999999999999999999999999999999876554 457899999999999999999999999988743
Q ss_pred ccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHH
Q 017290 107 IQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHY 186 (374)
Q Consensus 107 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~ 186 (374)
+. +.+.. .......+++..+.++++|++.++.++..--.++ .--.+. |..|...|..++..+|.+ ..+
T Consensus 74 ~~-~~~~~---~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g-----~rLvD~--p~fP~ey~~~A~~~ae~L-~~L 141 (211)
T COG2910 74 AS-DNDEL---HSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG-----TRLVDT--PDFPAEYKPEALAQAEFL-DSL 141 (211)
T ss_pred CC-ChhHH---HHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC-----ceeecC--CCCchhHHHHHHHHHHHH-HHH
Confidence 11 11111 2334677888999999999999988654322111 111122 556777888888888754 555
Q ss_pred HhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC
Q 017290 187 TKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 187 ~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~ 260 (374)
..+.+++||.+-|+..|-|+..-++ ...++..+ +.+ ..--+.|+..|.|.+++..++++.
T Consensus 142 r~~~~l~WTfvSPaa~f~PGerTg~-----------yrlggD~l-l~n--~~G~SrIS~aDYAiA~lDe~E~~~ 201 (211)
T COG2910 142 RAEKSLDWTFVSPAAFFEPGERTGN-----------YRLGGDQL-LVN--AKGESRISYADYAIAVLDELEKPQ 201 (211)
T ss_pred hhccCcceEEeCcHHhcCCccccCc-----------eEeccceE-EEc--CCCceeeeHHHHHHHHHHHHhccc
Confidence 5556799999999999999643211 11112222 222 223478999999999999999874
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.7e-16 Score=140.48 Aligned_cols=216 Identities=16% Similarity=0.059 Sum_probs=147.0
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+.+.++++||||+|+||+++++.|+++|++|+++.|+...... .....+.++.+|+.+.+.+.++++
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF 81 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3456899999999999999999999999999888776432110 111246788899999888877765
Q ss_pred -CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 90 -GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
++|+|||+|+....... ...+.+..+.+|+.++..+++++.+. ...++|++||...+.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~---------------- 145 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL---------------- 145 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC----------------
Confidence 68999999996532111 12234456789999999988877653 224899999865532
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
+..+...|+.+|...+.+++.++.+ .++.+++++|+.+-.+... .......+..... .. ...
T Consensus 146 -~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~----~~~~~~~~~~~~~-~~---------~~~ 210 (245)
T PRK12937 146 -PLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFF----NGKSAEQIDQLAG-LA---------PLE 210 (245)
T ss_pred -CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhc----ccCCHHHHHHHHh-cC---------CCC
Confidence 2224468999999999999988765 3688999999988655310 0111122222211 11 122
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
.+.+.+|+++++..++..+ .+.++++.++
T Consensus 211 ~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 243 (245)
T PRK12937 211 RLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNGG 243 (245)
T ss_pred CCCCHHHHHHHHHHHcCccccCccccEEEeCCC
Confidence 3567899999999888654 2566776643
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.5e-16 Score=143.15 Aligned_cols=203 Identities=16% Similarity=0.038 Sum_probs=140.0
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CCCE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
|+|+||||+|.||++++++|+++|++|++++|+....... ....+.++.+|+.+.+.+..+++ ++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5799999999999999999999999999999886542211 12246778999999887776654 6899
Q ss_pred EEEcccccCCcccccC---CcceehhhhHHHHHHHHHH----HHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 94 VFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEA----SRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 94 vi~~a~~~~~~~~~~~---~~~~~~~~n~~~~~~ll~a----~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
|||+++........+. +.+..+++|+.++..+.++ +++.+..++|++||...+. +.
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------------~~ 143 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLM-----------------QG 143 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcC-----------------CC
Confidence 9999997542212221 2233567787766665544 5666777999999976543 22
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCC-CCcHHHHHHHHhccCCceEeeCCCcccccc
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGM-EKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (374)
.....|+.+|...+.+.+.++.+ .++++++++|+.+..+....... .......+... ....+
T Consensus 144 ~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--------------~~~~~ 209 (270)
T PRK05650 144 PAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKL--------------LEKSP 209 (270)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHH--------------hhcCC
Confidence 23468999999999888888765 37999999999998764321100 00011111110 01235
Q ss_pred eeHHHHHHHHHhhhccCC
Q 017290 243 TFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~~ 260 (374)
++++|+|+.++.++++..
T Consensus 210 ~~~~~vA~~i~~~l~~~~ 227 (270)
T PRK05650 210 ITAADIADYIYQQVAKGE 227 (270)
T ss_pred CCHHHHHHHHHHHHhCCC
Confidence 789999999999998643
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.3e-17 Score=143.95 Aligned_cols=214 Identities=12% Similarity=0.021 Sum_probs=147.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
...+++|||||+|+||+++++.|+++|+.|++++|+..+.... ....+.++.+|+.+.+.+.++++ +
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3568999999999999999999999999999999886432111 11245678899998877765543 5
Q ss_pred CCEEEEcccccCCc------------ccccCCcceehhhhHHHHHHHHHHHH----hC-CCCeEEEeecccccCCCcccc
Q 017290 91 VDHVFNLAADMGGM------------GFIQSNHSVIMYNNTMISFNMLEASR----IS-GVKRFFYASSACIYPEFKQLE 153 (374)
Q Consensus 91 ~d~vi~~a~~~~~~------------~~~~~~~~~~~~~n~~~~~~ll~a~~----~~-~~~~~i~~Ss~~vy~~~~~~~ 153 (374)
+|+|||+++..... ..........+..|+.++..+..++. +. .-.++|++||...|+.
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~----- 157 (253)
T PRK08217 83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN----- 157 (253)
T ss_pred CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC-----
Confidence 79999999864310 01112233456788888876665433 22 2237999999766532
Q ss_pred cccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCce
Q 017290 154 TNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKF 230 (374)
Q Consensus 154 ~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (374)
.+...|+.+|...+.+++.++.+ .+++++.++|+.+.++... ............ .
T Consensus 158 -------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~-----~~~~~~~~~~~~-~--- 215 (253)
T PRK08217 158 -------------MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTA-----AMKPEALERLEK-M--- 215 (253)
T ss_pred -------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccc-----ccCHHHHHHHHh-c---
Confidence 23467999999999999988764 4799999999999876431 112222222211 1
Q ss_pred EeeCCCcccccceeHHHHHHHHHhhhccC--CCCcEEecCCC
Q 017290 231 EMWGDGLQTRSFTFIDECVEGVLRLTKSD--FREPVNIGSDE 270 (374)
Q Consensus 231 ~~~~~~~~~~~~i~~~Dva~~i~~~~~~~--~~~~~~i~~~~ 270 (374)
.....+.+.+|+|+++..++... .+.+++++++.
T Consensus 216 ------~~~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~gg~ 251 (253)
T PRK08217 216 ------IPVGRLGEPEEIAHTVRFIIENDYVTGRVLEIDGGL 251 (253)
T ss_pred ------CCcCCCcCHHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence 11234678999999999988764 46788888654
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.2e-17 Score=144.05 Aligned_cols=222 Identities=14% Similarity=0.072 Sum_probs=146.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc----------ccccceeEEecccchhhHhhhcc----
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE----------DMFCHEFHLVDLRVMDNCLKVTK---- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----------~~~~i~~~~~dl~~~~~~~~~~~---- 89 (374)
.+++++|||||+|+||.++++.|++.|++|+++.++....... ....+.++.+|+++.+.+.++++
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 85 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA 85 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence 4568999999999999999999999999987777654321110 01246778999999988877654
Q ss_pred ---CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 ---GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 ---~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|++||+|+...... ....+.+..+++|+.++..+++++...- ..++++++|..+..
T Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-------------- 151 (257)
T PRK12744 86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-------------- 151 (257)
T ss_pred hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc--------------
Confidence 6899999999743211 2222345568899999999888876431 23566654332211
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
+......|+.+|...|.+++.++.+. ++++++++||.+..+..... ...... . ... . . .......
T Consensus 152 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~---~~~~~~-~-~~~--~-~-~~~~~~~ 219 (257)
T PRK12744 152 ---FTPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQ---EGAEAV-A-YHK--T-A-AALSPFS 219 (257)
T ss_pred ---cCCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccc---cccchh-h-ccc--c-c-ccccccc
Confidence 11123679999999999999998764 59999999999976532100 000000 0 000 0 0 0011112
Q ss_pred cccceeHHHHHHHHHhhhccC---CCCcEEecCCCc
Q 017290 239 TRSFTFIDECVEGVLRLTKSD---FREPVNIGSDEM 271 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~---~~~~~~i~~~~~ 271 (374)
...+.+.+|+|.++..+++.. .+.++++.++..
T Consensus 220 ~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~gg~~ 255 (257)
T PRK12744 220 KTGLTDIEDIVPFIRFLVTDGWWITGQTILINGGYT 255 (257)
T ss_pred cCCCCCHHHHHHHHHHhhcccceeecceEeecCCcc
Confidence 235789999999999999853 267788776543
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=8e-17 Score=142.73 Aligned_cols=215 Identities=15% Similarity=0.004 Sum_probs=147.2
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEE-eCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIAS-DWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
..++++|||+||+|+||+++++.|++.|++|+++ +|+....... ....+.++.+|+++.+.+..+++
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF 81 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 3456899999999999999999999999999998 8875432111 11246788999999988877664
Q ss_pred -CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 -GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|+|||+++...... ......+..+..|+.++.++++++. +.+.+++|++||...+...
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~------------ 149 (247)
T PRK05565 82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA------------ 149 (247)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC------------
Confidence 7899999999753211 1122235567889998877777664 3455689999996554321
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
.....|+.+|...+.+++.++.+ .+++++++||+.+..+.... ........... . ..
T Consensus 150 -----~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~-----~~~~~~~~~~~------~----~~ 209 (247)
T PRK05565 150 -----SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSS-----FSEEDKEGLAE------E----IP 209 (247)
T ss_pred -----CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccc-----cChHHHHHHHh------c----CC
Confidence 12357999999988888887664 37999999999987653211 11111111110 0 11
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
...+...+|++++++.++... .+..+++.++
T Consensus 210 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~ 244 (247)
T PRK05565 210 LGRLGKPEEIAKVVLFLASDDASYITGQIITVDGG 244 (247)
T ss_pred CCCCCCHHHHHHHHHHHcCCccCCccCcEEEecCC
Confidence 234678899999999988664 2556666654
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-16 Score=147.43 Aligned_cols=210 Identities=13% Similarity=0.066 Sum_probs=143.9
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
++.+++|+||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+..+++
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG 84 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence 34568999999999999999999999999999999986432211 11245678899999988877653
Q ss_pred CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHH----HHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFN----MLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~----ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|++||+++....... ...+.+..+++|+.+... ++..+++.+..++|++||...|..
T Consensus 85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~-------------- 150 (334)
T PRK07109 85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRS-------------- 150 (334)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccC--------------
Confidence 68999999996432111 122234456777666555 445555555568999999877642
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh-----hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD-----FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
......|+.+|...+.+.+.++.+ .++.+++++|+.+..+.. ......+. . ...
T Consensus 151 ---~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~----------~~~~~~~~-~-------~~~ 209 (334)
T PRK07109 151 ---IPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQF----------DWARSRLP-V-------EPQ 209 (334)
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchh----------hhhhhhcc-c-------ccc
Confidence 123467999999999988887654 358999999999876521 11111110 0 011
Q ss_pred ccccceeHHHHHHHHHhhhccCCCCcEEecC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSDFREPVNIGS 268 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~~~~~~~i~~ 268 (374)
...+++..+|+|++++.++.++ ...++++.
T Consensus 210 ~~~~~~~pe~vA~~i~~~~~~~-~~~~~vg~ 239 (334)
T PRK07109 210 PVPPIYQPEVVADAILYAAEHP-RRELWVGG 239 (334)
T ss_pred CCCCCCCHHHHHHHHHHHHhCC-CcEEEeCc
Confidence 1234678999999999999876 34455553
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-16 Score=141.22 Aligned_cols=215 Identities=15% Similarity=0.079 Sum_probs=145.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhc-------cCCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVT-------KGVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~-------~~~d~ 93 (374)
++++++|||||+|+||+++++.|+++|+.|++.+|+..+.... ...++.++.+|+.+.+.+..++ .++|+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3568999999999999999999999999998888775432211 1124678889999988877664 36899
Q ss_pred EEEcccccCCc---ccccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 94 VFNLAADMGGM---GFIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 94 vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
|||+|+..... .....+.+..+++|+.++..+++++.. .+..++|++||...+...
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------------- 146 (245)
T PRK12936 84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGN----------------- 146 (245)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCC-----------------
Confidence 99999964321 112233455688999998888776542 345689999996443211
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
.....|+.+|...+.+++.++.+ .++++++++|+.+..+.... ........... ......+.
T Consensus 147 ~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~------~~~~~~~~~~~---------~~~~~~~~ 211 (245)
T PRK12936 147 PGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK------LNDKQKEAIMG---------AIPMKRMG 211 (245)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc------cChHHHHHHhc---------CCCCCCCc
Confidence 12357999999888888777654 47999999999876543210 00111111110 01123466
Q ss_pred eHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 244 FIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
+.+|+++++..++... .+..+++.++.
T Consensus 212 ~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK12936 212 TGAEVASAVAYLASSEAAYVTGQTIHVNGGM 242 (245)
T ss_pred CHHHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence 7999999998877643 36678887653
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3e-16 Score=139.95 Aligned_cols=219 Identities=11% Similarity=0.034 Sum_probs=149.5
Q ss_pred CCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-----
Q 017290 21 YWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 21 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
.+..++++++||||+|+||+++++.|+++|++|++++|++...... ....+.++.+|+++.+.+..+++
T Consensus 6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (256)
T PRK06124 6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE 85 (256)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 3445679999999999999999999999999999999986432111 11236788999999888776654
Q ss_pred --CCCEEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 --GVDHVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|+|||+++........ ..+.+..+..|+.++..+++++. +.+..++|++||...+..
T Consensus 86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~------------ 153 (256)
T PRK06124 86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVA------------ 153 (256)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccC------------
Confidence 569999999964321111 12334567889888888886554 356679999999755321
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
......|+.+|...+.+++.++.+ .++++..++|+.+..+..... .....+... +... .
T Consensus 154 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~---~~~~~~~~~-~~~~--~------- 215 (256)
T PRK06124 154 -----RAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAM---AADPAVGPW-LAQR--T------- 215 (256)
T ss_pred -----CCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhh---ccChHHHHH-HHhc--C-------
Confidence 122368999999999998888755 379999999999988742110 000111111 1111 0
Q ss_pred ccccceeHHHHHHHHHhhhccCC----CCcEEecCC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSDF----REPVNIGSD 269 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~~----~~~~~i~~~ 269 (374)
....+++.+|++++++.++..+. +..+.+.++
T Consensus 216 ~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg 251 (256)
T PRK06124 216 PLGRWGRPEEIAGAAVFLASPAASYVNGHVLAVDGG 251 (256)
T ss_pred CCCCCCCHHHHHHHHHHHcCcccCCcCCCEEEECCC
Confidence 12247899999999999987652 444555443
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4e-17 Score=145.42 Aligned_cols=218 Identities=13% Similarity=0.035 Sum_probs=149.5
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+...++++|||||+|.||++++++|++.|++|++++|+....... ....+..+.+|+++.+.+..+++
T Consensus 5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 445678999999999999999999999999999999986432211 11235677899999888776653
Q ss_pred -CCCEEEEcccccCCc---ccccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 -GVDHVFNLAADMGGM---GFIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|+|||+++..... .....+.+..+++|+.++..+++++.. .+..++|++||.....
T Consensus 85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-------------- 150 (254)
T PRK08085 85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL-------------- 150 (254)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc--------------
Confidence 589999999964321 122233455788898888888776543 4456899999964321
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
+......|+.+|...+.+++.++.+ .++++.+++||.+..+..... .....+... .... .+
T Consensus 151 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~---~~~~~~~~~-~~~~---------~p 214 (254)
T PRK08085 151 ---GRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKAL---VEDEAFTAW-LCKR---------TP 214 (254)
T ss_pred ---CCCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhh---ccCHHHHHH-HHhc---------CC
Confidence 2234468999999999999999765 479999999999987642110 000111111 1111 12
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
...+...+|++.++..++... .+.+..+.++
T Consensus 215 ~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgg 249 (254)
T PRK08085 215 AARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGG 249 (254)
T ss_pred CCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 234678899999998888754 2455555544
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-16 Score=143.41 Aligned_cols=216 Identities=14% Similarity=0.050 Sum_probs=147.2
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
+..++++|||||+|+||.++++.|+++|++|++++|++...... ...++.++.+|+++.+.+.++++
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG 86 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 34678999999999999999999999999999999986532211 11246778899999988876654
Q ss_pred CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHHh-----CCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRI-----SGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~-----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|+|||+|+...... ....+....+.+|+.++.++.+++.. .+..++|++||.....
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~-------------- 152 (263)
T PRK07814 87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL-------------- 152 (263)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC--------------
Confidence 6899999998643211 11223455688999999999998863 4456899999964321
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhhh--CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKDF--GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+..+...|+.+|...+.+++.++.+. ++.+..++|+.+..+.-.. ... -..+ ...+... ...
T Consensus 153 ---~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~--~~~-~~~~-~~~~~~~---------~~~ 216 (263)
T PRK07814 153 ---AGRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEV--VAA-NDEL-RAPMEKA---------TPL 216 (263)
T ss_pred ---CCCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhh--ccC-CHHH-HHHHHhc---------CCC
Confidence 22345689999999999999988764 4788889998886542110 000 0111 1111110 112
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGS 268 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~ 268 (374)
..+...+|+|++++.++... .+..+.+.+
T Consensus 217 ~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~ 249 (263)
T PRK07814 217 RRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDG 249 (263)
T ss_pred CCCcCHHHHHHHHHHHcCccccCcCCCEEEECC
Confidence 23568899999999988653 245555554
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.4e-16 Score=142.24 Aligned_cols=220 Identities=15% Similarity=0.123 Sum_probs=149.5
Q ss_pred CCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-----ccccccceeEEecccchhhHhhhcc-----
Q 017290 20 PYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-----TEDMFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 20 ~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
+++...+++||||||+|.||.++++.|++.|++|+++.|+.+... ......+.++.+|+.+.+.+..+++
T Consensus 9 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 88 (258)
T PRK06935 9 DFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE 88 (258)
T ss_pred ccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 344456799999999999999999999999999999998732110 0011246788999999888877765
Q ss_pred --CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 --GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+++....... ...+.+..+++|+.++..+++++. +.+..++|++||...+..
T Consensus 89 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------ 156 (258)
T PRK06935 89 FGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQG------------ 156 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccC------------
Confidence 68999999996432111 122344567888888777766553 445569999999866532
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
......|+.+|...+.+++.++.+ .++++.+++||.+..+........ ......... . +
T Consensus 157 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~---~~~~~~~~~-~----~----- 218 (258)
T PRK06935 157 -----GKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD---KNRNDEILK-R----I----- 218 (258)
T ss_pred -----CCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC---hHHHHHHHh-c----C-----
Confidence 122357999999999999999875 369999999999876532110000 001111110 0 1
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
....+...+|++.++..++... .+.++.+.++
T Consensus 219 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg 254 (258)
T PRK06935 219 PAGRWGEPDDLMGAAVFLASRASDYVNGHILAVDGG 254 (258)
T ss_pred CCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence 1234678899999999888653 3566666655
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.3e-17 Score=145.09 Aligned_cols=218 Identities=20% Similarity=0.097 Sum_probs=147.2
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+..+.++||||||+|+||.++++.|++.|++|++++|+....... ....+.++.+|+.+.+.+..+++
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH 83 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 445678999999999999999999999999999999976432111 11235678899999887766554
Q ss_pred -CCCEEEEcccccCCc----ccccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 -GVDHVFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+|+..... .....+.+..++.|+.++..+++++ ++.+..++|++||...+.
T Consensus 84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------- 150 (252)
T PRK07035 84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS------------- 150 (252)
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC-------------
Confidence 589999999854211 1112223456888998888777665 445556999999864421
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+..+.+.|+.+|...+.+++.++.+. ++++..+.||.+..+..... ... ......... ..
T Consensus 151 ----~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~--~~~-~~~~~~~~~-~~--------- 213 (252)
T PRK07035 151 ----PGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASAL--FKN-DAILKQALA-HI--------- 213 (252)
T ss_pred ----CCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccc--cCC-HHHHHHHHc-cC---------
Confidence 22345689999999999999997653 79999999998865432110 000 111111111 00
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
....+...+|+|+++..++.+. .+.++.+.++
T Consensus 214 ~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg 249 (252)
T PRK07035 214 PLRRHAEPSEMAGAVLYLASDASSYTTGECLNVDGG 249 (252)
T ss_pred CCCCcCCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence 1223567899999999988764 3556666543
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.5e-17 Score=142.06 Aligned_cols=193 Identities=15% Similarity=0.054 Sum_probs=139.2
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc----CCCEE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK----GVDHV 94 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~----~~d~v 94 (374)
||+++||||+|+||.+++++|+++|++|++++|++...... ...++.++.+|+.+.+++.++++ ++|+|
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 57899999999999999999999999999999987543211 11256889999999888877665 57999
Q ss_pred EEcccccCCcccccC---CcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 95 FNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 95 i~~a~~~~~~~~~~~---~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
||+++........+. +....++.|+.++..+++++.. .+..++|++||..... +..
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------------~~~ 143 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR-----------------GRA 143 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC-----------------CCC
Confidence 999986542212122 2234577899998888877643 4566999999964321 111
Q ss_pred CCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccccee
Q 017290 168 PQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
....|+.+|...+.+++.++.+ .++++++++|+.+.++... +.. . .....+.
T Consensus 144 ~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~------------------~~~--~-----~~~~~~~ 198 (243)
T PRK07102 144 SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTA------------------GLK--L-----PGPLTAQ 198 (243)
T ss_pred CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhh------------------ccC--C-----CccccCC
Confidence 2357999999999999888643 4799999999999875210 000 0 0112467
Q ss_pred HHHHHHHHHhhhccCC
Q 017290 245 IDECVEGVLRLTKSDF 260 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~~ 260 (374)
.+|+++.++.+++++.
T Consensus 199 ~~~~a~~i~~~~~~~~ 214 (243)
T PRK07102 199 PEEVAKDIFRAIEKGK 214 (243)
T ss_pred HHHHHHHHHHHHhCCC
Confidence 8999999999888653
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.4e-16 Score=142.09 Aligned_cols=219 Identities=16% Similarity=0.093 Sum_probs=143.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
++++|||||+|+||+++++.|+++|++|++++|+....... ...++.++.+|+++.+.+.++++ ++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 57899999999999999999999999999999886432111 11245678999999987776664 689
Q ss_pred EEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
+|||+|+......... .+.+..+.+|+.++..+++++.. .+ ..++|++||...+.
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------- 144 (256)
T PRK08643 82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV----------------- 144 (256)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc-----------------
Confidence 9999998643211111 22345677899888776666543 22 24899999965432
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCC-----CCCcHHHHHHHHhccCCceEeeCCC
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKG-----MEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
+......|+.+|...+.+++.++.+ .+++++.++|+.+..+.-.... .......+...... ..
T Consensus 145 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 215 (256)
T PRK08643 145 GNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFA---------KD 215 (256)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHh---------cc
Confidence 1123467999999999998888764 4799999999999876311000 00000000000000 00
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.....+...+|+|.++..++... .+..+.+.++.
T Consensus 216 ~~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~ 253 (256)
T PRK08643 216 ITLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGGM 253 (256)
T ss_pred CCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCe
Confidence 01224568899999999888654 35666666553
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=142.12 Aligned_cols=216 Identities=15% Similarity=0.068 Sum_probs=142.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC-Cccccc------ccccceeEEecccchhhHhhhc---------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK-NEHMTE------DMFCHEFHLVDLRVMDNCLKVT--------- 88 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~------~~~~i~~~~~dl~~~~~~~~~~--------- 88 (374)
++|+++||||+|+||+++++.|++.|++|+++.++. ...... ....+..+.+|+.+.+.+..++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 468999999999999999999999999998875432 211100 0113456778998876554322
Q ss_pred ----cCCCEEEEcccccCCcccccC---CcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCC
Q 017290 89 ----KGVDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 89 ----~~~d~vi~~a~~~~~~~~~~~---~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
.++|++||+|+........+. ..+..+++|+.++..+++++...- ..++|++||...+..
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------- 151 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS----------- 151 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC-----------
Confidence 168999999996432112221 235567799999999888765432 238999999865431
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
......|+.+|...+.+++.++.+. ++++.++.||.+..+..... .. ......... ..
T Consensus 152 ------~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~-~~---~~~~~~~~~---------~~ 212 (252)
T PRK12747 152 ------LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAEL-LS---DPMMKQYAT---------TI 212 (252)
T ss_pred ------CCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhc-cc---CHHHHHHHH---------hc
Confidence 1234689999999999999887653 79999999999987642100 00 001111111 00
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.....+.+.+|+|.++..++... .+..+.+.++.
T Consensus 213 ~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg~ 250 (252)
T PRK12747 213 SAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS 250 (252)
T ss_pred CcccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCCc
Confidence 11234778999999999988653 25666666543
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-16 Score=141.82 Aligned_cols=217 Identities=15% Similarity=0.093 Sum_probs=146.4
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
..+++++||||+|.||.++++.|++.|++|++++|++.+.... ....+.++.+|+.+.+.+..+++ +
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 3458999999999999999999999999999999986542211 11235678899999887776664 6
Q ss_pred CCEEEEcccccCCc-cc---ccCCcceehhhhHHHHHHHHH----HHHhCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 91 VDHVFNLAADMGGM-GF---IQSNHSVIMYNNTMISFNMLE----ASRISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 91 ~d~vi~~a~~~~~~-~~---~~~~~~~~~~~n~~~~~~ll~----a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
+|++||+|+..... .. ...+.+..+++|+.+...++. .+++.+..++|++||...+..
T Consensus 84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~-------------- 149 (254)
T PRK07478 84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA-------------- 149 (254)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc--------------
Confidence 89999999974311 11 122345568889877666654 444555568999999765421
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+......|+.+|...+.+++.++.+. ++.+.+++||.+-.+..... ... ... ...+.... ..
T Consensus 150 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~-~~~-~~~~~~~~---------~~ 214 (254)
T PRK07478 150 --GFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAM--GDT-PEA-LAFVAGLH---------AL 214 (254)
T ss_pred --CCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccc--cCC-HHH-HHHHHhcC---------CC
Confidence 11234689999999999999987764 69999999999876522110 000 111 11111100 11
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
..+...+|+|++++.++..+ .+.++.+.++
T Consensus 215 ~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg 248 (254)
T PRK07478 215 KRMAQPEEIAQAALFLASDAASFVTGTALLVDGG 248 (254)
T ss_pred CCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCCc
Confidence 23568899999999988654 2555666544
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-16 Score=141.09 Aligned_cols=217 Identities=15% Similarity=0.060 Sum_probs=150.6
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
..+++|+||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|+++.+.+.++++ +
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4579999999999999999999999999999998875432211 01235678899999888776543 6
Q ss_pred CCEEEEcccccCCc--ccccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 91 VDHVFNLAADMGGM--GFIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 91 ~d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
+|++||+++..... .....+.+..+.+|+.++.++++++. +.+..++|++||.....
T Consensus 89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------------- 151 (255)
T PRK06113 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN----------------- 151 (255)
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC-----------------
Confidence 79999999964321 11122334458899999999988875 33445899999975431
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
+..+...|+.+|...+.+++.++.+ .++.+.++.|+.+..+... ......+...... . .....
T Consensus 152 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~----~~~~~~~~~~~~~-~---------~~~~~ 217 (255)
T PRK06113 152 KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK----SVITPEIEQKMLQ-H---------TPIRR 217 (255)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccc----cccCHHHHHHHHh-c---------CCCCC
Confidence 2234467999999999999998764 4689999999988755321 1111222222211 1 11223
Q ss_pred ceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 242 FTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+...+|++++++.++... .+.++++.++..
T Consensus 218 ~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~~ 251 (255)
T PRK06113 218 LGQPQDIANAALFLCSPAASWVSGQILTVSGGGV 251 (255)
T ss_pred CcCHHHHHHHHHHHcCccccCccCCEEEECCCcc
Confidence 678899999999998754 367788877643
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.9e-16 Score=141.33 Aligned_cols=217 Identities=13% Similarity=0.121 Sum_probs=148.8
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------c--cccceeEEecccchhhHhhhcc----
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------D--MFCHEFHLVDLRVMDNCLKVTK---- 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~--~~~i~~~~~dl~~~~~~~~~~~---- 89 (374)
|...+|+++||||+|.||+++++.|.++|++|++++|+.+..... . ...+.++.+|+.+.+.+..+++
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED 84 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 344678999999999999999999999999999999976432111 0 1246778899999887665543
Q ss_pred ---CCCEEEEcccccCCc---ccccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCC
Q 017290 90 ---GVDHVFNLAADMGGM---GFIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 ---~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|+|||+++..... .....+.+..+.+|+.++..+++++. +.+..++|++||...+..
T Consensus 85 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~----------- 153 (257)
T PRK09242 85 HWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTH----------- 153 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCC-----------
Confidence 689999999963211 12233445568889999988887764 345569999999766432
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
..+...|+.+|...+.+++.++.+ .++++..++|+.+..+..... .. ...+...... ..
T Consensus 154 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~--~~-~~~~~~~~~~-~~-------- 215 (257)
T PRK09242 154 ------VRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGP--LS-DPDYYEQVIE-RT-------- 215 (257)
T ss_pred ------CCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccc--cC-ChHHHHHHHh-cC--------
Confidence 234467999999999999988754 479999999999987642210 00 1112222111 11
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGS 268 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~ 268 (374)
....+...+|++.++..++... .+..+.+.+
T Consensus 216 -~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~g 250 (257)
T PRK09242 216 -PMRRVGEPEEVAAAVAFLCMPAASYITGQCIAVDG 250 (257)
T ss_pred -CCCCCcCHHHHHHHHHHHhCcccccccCCEEEECC
Confidence 1122456799999999988653 245555554
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.5e-16 Score=142.01 Aligned_cols=214 Identities=17% Similarity=0.050 Sum_probs=146.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
++++|+||||+|.||+++++.|+++|++|+++.++....... ....+.++.+|+++.+.+..+++ +
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 357899999999999999999999999998887654321110 11246788999999887766553 5
Q ss_pred CCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhC----C-CCeEEEeecccccCCCcccccccCCCCCC
Q 017290 91 VDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRIS----G-VKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~----~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
+|+|||+++....... ...+....+.+|+.+...+++++... + -.++|++||.....
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~--------------- 145 (256)
T PRK12743 81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT--------------- 145 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC---------------
Confidence 8999999997542111 11234556889999999998876542 2 24899999964311
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+..+...|+.+|...+.+++.++.+ .+++++.++||.+..+.... .......... ...+ .
T Consensus 146 --~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~-----~~~~~~~~~~---~~~~-------~ 208 (256)
T PRK12743 146 --PLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGM-----DDSDVKPDSR---PGIP-------L 208 (256)
T ss_pred --CCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccc-----cChHHHHHHH---hcCC-------C
Confidence 2345578999999999999888764 47999999999999874211 1111111111 0111 1
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
..+.+.+|+++++..++... .+.++.+.++.
T Consensus 209 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~ 243 (256)
T PRK12743 209 GRPGDTHEIASLVAWLCSEGASYTTGQSLIVDGGF 243 (256)
T ss_pred CCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 13458899999998888653 35666766654
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-16 Score=141.38 Aligned_cols=208 Identities=19% Similarity=0.124 Sum_probs=144.3
Q ss_pred EEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-c------ccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-E------DMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 29 ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~------~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
|||||++|+||+++++.|+++|++|++++|+...... . ....+.++.+|+++.+.+..+++ .+|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5899999999999999999999999999987522110 0 11135688999999888777654 57999
Q ss_pred EEcccccCCc---ccccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeeccc-ccCCCcccccccCCCCCCCCCC
Q 017290 95 FNLAADMGGM---GFIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSAC-IYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 95 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~-vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
||+++..... .......+..+..|+.++..+++++.. .+.+++|++||.. +|+.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~------------------ 142 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGN------------------ 142 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC------------------
Confidence 9999975321 112233456788899999999888764 4456999999964 3331
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
.....|+.+|...+.+++.++.+ .++.++++||+.+.++... ........... ... ....+.
T Consensus 143 ~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~-----~~~~~~~~~~~-~~~---------~~~~~~ 207 (239)
T TIGR01830 143 AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD-----KLSEKVKKKIL-SQI---------PLGRFG 207 (239)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh-----hcChHHHHHHH-hcC---------CcCCCc
Confidence 12357999999999988887654 4799999999988665321 11111111111 111 122366
Q ss_pred eHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 244 FIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
+++|++++++.++... .+.+|+++++
T Consensus 208 ~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 208 TPEEVANAVAFLASDEASYITGQVIHVDGG 237 (239)
T ss_pred CHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence 8999999999888543 3678888754
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.5e-16 Score=139.72 Aligned_cols=197 Identities=15% Similarity=0.122 Sum_probs=141.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhcc-------C
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
+++++||||+|.||++++++|+++|++|++++|++...... ....+.++.+|+++.+.+..+++ +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999999986532211 12246788999999887766553 6
Q ss_pred CCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+|+|||+|+......... ......+++|+.++..+++++. +.+..++|++||...+..
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------- 146 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRG--------------- 146 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccC---------------
Confidence 899999999753221111 1223457789998888877653 456679999999654321
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
...+...|+.+|...+.+++.+..+ .++++++++|+.+.++... . . + . ..
T Consensus 147 -~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~-------------~-~--~-------~---~~ 199 (248)
T PRK08251 147 -LPGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA-------------K-A--K-------S---TP 199 (248)
T ss_pred -CCCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh-------------c-c--c-------c---CC
Confidence 1123468999999999998888754 3689999999999765210 0 0 0 0 11
Q ss_pred cceeHHHHHHHHHhhhccCCCCcE
Q 017290 241 SFTFIDECVEGVLRLTKSDFREPV 264 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~~~~~~ 264 (374)
..+..+|+|++++.++++....+|
T Consensus 200 ~~~~~~~~a~~i~~~~~~~~~~~~ 223 (248)
T PRK08251 200 FMVDTETGVKALVKAIEKEPGRAA 223 (248)
T ss_pred ccCCHHHHHHHHHHHHhcCCCeEE
Confidence 257789999999999987665554
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.5e-16 Score=137.94 Aligned_cols=196 Identities=14% Similarity=0.063 Sum_probs=136.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCc-ccc----c---ccccceeEEecccchhhHhhhcc------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNE-HMT----E---DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~-~~~----~---~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
..++|+||||+|.||++++++|+++| ++|++++|+++. ... . ...+++++.+|+.|.+++.++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 56889999999999999999999995 999999998764 111 1 11246889999999887654443
Q ss_pred CCCEEEEcccccCCcccccCCc---ceehhhhHHHHHH----HHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQSNH---SVIMYNNTMISFN----MLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~~~~---~~~~~~n~~~~~~----ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|++||+++..........+. .+.+++|+.++.. ++.++++.+..++|++||...+.
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~--------------- 151 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGER--------------- 151 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcC---------------
Confidence 6999999998753210000011 1347888877655 56667777777999999975432
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHh---hhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTK---DFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+..+...|+.+|.....+.+.+.. ..++++++++||.+..+.. .. . .. .
T Consensus 152 --~~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~-------------~~-~--~~----------~ 203 (253)
T PRK07904 152 --VRRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMS-------------AH-A--KE----------A 203 (253)
T ss_pred --CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchh-------------cc-C--CC----------C
Confidence 112335799999999877766643 3579999999999986421 00 0 00 0
Q ss_pred ccceeHHHHHHHHHhhhccCCCCc
Q 017290 240 RSFTFIDECVEGVLRLTKSDFREP 263 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~~~~~ 263 (374)
...+..+|+|+.++.+++++...+
T Consensus 204 ~~~~~~~~~A~~i~~~~~~~~~~~ 227 (253)
T PRK07904 204 PLTVDKEDVAKLAVTAVAKGKELV 227 (253)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEE
Confidence 124688999999999998765543
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.9e-17 Score=144.04 Aligned_cols=200 Identities=17% Similarity=0.032 Sum_probs=139.2
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc----cccceeEEecccchhhHhhhcc--------CCCE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED----MFCHEFHLVDLRVMDNCLKVTK--------GVDH 93 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~i~~~~~dl~~~~~~~~~~~--------~~d~ 93 (374)
|+++|||||+|+||+++++.|+++|++|++++|+........ ...+.++.+|+.+.+++.++++ ++|+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 578999999999999999999999999999999875432211 1246888999999888776654 5699
Q ss_pred EEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 94 VFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 94 vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
|||||+......+. ..+.+..+.+|+.++..+++++. ..+..++|++||...+.. .
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------------~ 143 (260)
T PRK08267 81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYG-----------------Q 143 (260)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcC-----------------C
Confidence 99999975422111 12345678899999999988764 344568999999644221 1
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
.....|+.+|...+.+++.++.+ .++++++++|+.+..+... ............ .....+
T Consensus 144 ~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~-----~~~~~~~~~~~~------------~~~~~~ 206 (260)
T PRK08267 144 PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLD-----GTSNEVDAGSTK------------RLGVRL 206 (260)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccc-----cccchhhhhhHh------------hccCCC
Confidence 12357999999999999888754 4699999999998754211 000000000000 011135
Q ss_pred eHHHHHHHHHhhhccC
Q 017290 244 FIDECVEGVLRLTKSD 259 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~ 259 (374)
..+|++++++.+++..
T Consensus 207 ~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 207 TPEDVAEAVWAAVQHP 222 (260)
T ss_pred CHHHHHHHHHHHHhCC
Confidence 6699999999998754
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-16 Score=139.71 Aligned_cols=215 Identities=15% Similarity=0.099 Sum_probs=150.1
Q ss_pred EEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-----cccceeEEecccchhhHhhhcc---CCCEEEEccccc
Q 017290 30 SVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-----MFCHEFHLVDLRVMDNCLKVTK---GVDHVFNLAADM 101 (374)
Q Consensus 30 lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~i~~~~~dl~~~~~~~~~~~---~~d~vi~~a~~~ 101 (374)
|||||+|+||+++++.|+++|++|++++|++....... ..+++++.+|+++.+++..+++ ++|++||+++..
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 69999999999999999999999999999854322110 2346788999999999988876 579999999975
Q ss_pred CCccc---ccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHH
Q 017290 102 GGMGF---IQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA 178 (374)
Q Consensus 102 ~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~ 178 (374)
....+ ...+.+..+++|+.++..++++....+..++|++||...|.. ..+...|+.+|..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~-----------------~~~~~~Y~~sK~a 143 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRP-----------------SASGVLQGAINAA 143 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCC-----------------CCcchHHHHHHHH
Confidence 32111 122345668889999999998666555669999999877642 2345689999999
Q ss_pred HHHHHHHHHhhh-CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhc
Q 017290 179 SEELCKHYTKDF-GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257 (374)
Q Consensus 179 ~E~~~~~~~~~~-~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~ 257 (374)
.+.+++.++.+. +++++.++|+.+-.+..... .......++..... . . ....+...+|+|++++.++.
T Consensus 144 ~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~-~~~~~~~~~~~~~~-~--~-------~~~~~~~~~dva~~~~~l~~ 212 (230)
T PRK07041 144 LEALARGLALELAPVRVNTVSPGLVDTPLWSKL-AGDAREAMFAAAAE-R--L-------PARRVGQPEDVANAILFLAA 212 (230)
T ss_pred HHHHHHHHHHHhhCceEEEEeecccccHHHHhh-hccchHHHHHHHHh-c--C-------CCCCCcCHHHHHHHHHHHhc
Confidence 999999988664 58888999998765421100 00000111111111 0 0 11134578999999999987
Q ss_pred cC--CCCcEEecCCCcc
Q 017290 258 SD--FREPVNIGSDEMV 272 (374)
Q Consensus 258 ~~--~~~~~~i~~~~~~ 272 (374)
.. .+..|++.++..+
T Consensus 213 ~~~~~G~~~~v~gg~~~ 229 (230)
T PRK07041 213 NGFTTGSTVLVDGGHAI 229 (230)
T ss_pred CCCcCCcEEEeCCCeec
Confidence 65 3678888877543
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.2e-16 Score=140.95 Aligned_cols=205 Identities=13% Similarity=0.063 Sum_probs=142.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
..+++|+||||+|+||+++++.|++.|++|+++.|+....... ...++.++.+|+++.+.+.++++ +
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 4569999999999999999999999999999999986542211 11246789999999888877664 6
Q ss_pred CCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHh----CC--------CCeEEEeecccccCCCcccccc
Q 017290 91 VDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRI----SG--------VKRFFYASSACIYPEFKQLETN 155 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~----~~--------~~~~i~~Ss~~vy~~~~~~~~~ 155 (374)
+|++||+++....... ...+.+..+..|+.++..+++++.. .. ..++|++||...+.
T Consensus 87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-------- 158 (258)
T PRK06949 87 IDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR-------- 158 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC--------
Confidence 8999999996432111 1223455678898888888876642 21 24899999976542
Q ss_pred cCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEe
Q 017290 156 VSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEM 232 (374)
Q Consensus 156 ~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (374)
+......|+.+|...+.+++.++.+ .++++++++||.++++..... ........ +.. .+
T Consensus 159 ---------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~----~~~~~~~~-~~~--~~-- 220 (258)
T PRK06949 159 ---------VLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHH----WETEQGQK-LVS--ML-- 220 (258)
T ss_pred ---------CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhc----cChHHHHH-HHh--cC--
Confidence 1223467999999999999998765 479999999999998753210 00111111 110 00
Q ss_pred eCCCcccccceeHHHHHHHHHhhhccC
Q 017290 233 WGDGLQTRSFTFIDECVEGVLRLTKSD 259 (374)
Q Consensus 233 ~~~~~~~~~~i~~~Dva~~i~~~~~~~ 259 (374)
....+...+|+++++..++...
T Consensus 221 -----~~~~~~~p~~~~~~~~~l~~~~ 242 (258)
T PRK06949 221 -----PRKRVGKPEDLDGLLLLLAADE 242 (258)
T ss_pred -----CCCCCcCHHHHHHHHHHHhChh
Confidence 1123556799999999988753
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.2e-17 Score=143.62 Aligned_cols=220 Identities=14% Similarity=0.008 Sum_probs=147.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhcc-------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
.+++++||||+|.||+++++.|+++|++|++++|++...... ....+.++.+|+++.+.+..+++
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999999999999976532211 11245688999999888877664
Q ss_pred CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|++||+|+...... ....+.+..+++|+.++..+++++. +.+..++|++||...+..
T Consensus 86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------- 151 (260)
T PRK07063 86 PLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKI-------------- 151 (260)
T ss_pred CCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccC--------------
Confidence 6899999999643111 1222345567889999888877754 344458999999755321
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCC-CCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
......|+.+|...+.+++.++.+. ++++..++||.+-.+..... ............... . .+
T Consensus 152 ---~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~---------~~ 218 (260)
T PRK07063 152 ---IPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLA-L---------QP 218 (260)
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHh-c---------CC
Confidence 1233579999999999999987654 69999999998865431100 000000001111100 0 01
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
...+...+|+|.+++.++... .+....+.++..
T Consensus 219 ~~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~~ 255 (260)
T PRK07063 219 MKRIGRPEEVAMTAVFLASDEAPFINATCITIDGGRS 255 (260)
T ss_pred CCCCCCHHHHHHHHHHHcCccccccCCcEEEECCCee
Confidence 123567899999999988754 255566665543
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.9e-16 Score=142.68 Aligned_cols=199 Identities=16% Similarity=0.092 Sum_probs=140.2
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+.+.+++|+||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|+.|.+.+.++++
T Consensus 36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI 115 (293)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 444568999999999999999999999999999999986432111 01235688899999888877765
Q ss_pred -CCCEEEEcccccCCccccc-----CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCC
Q 017290 90 -GVDHVFNLAADMGGMGFIQ-----SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~~~-----~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|++|||||........+ .+....+.+|+.++..+++++ ++.+..++|++||.+++..
T Consensus 116 g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------- 184 (293)
T PRK05866 116 GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSE----------- 184 (293)
T ss_pred CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC-----------
Confidence 7899999999653211111 122346778888877777654 3566679999999765431
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
+......|+.+|...+.+++.++.+ .++++++++||.+-.+.-. . .. . ..
T Consensus 185 -----~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~-------------~----~~--~--~~- 237 (293)
T PRK05866 185 -----ASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIA-------------P----TK--A--YD- 237 (293)
T ss_pred -----CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccc-------------c----cc--c--cc-
Confidence 1112368999999999998888665 3799999999977544210 0 00 0 00
Q ss_pred cccccceeHHHHHHHHHhhhccCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~~ 260 (374)
....+..+++|+.++.++++..
T Consensus 238 --~~~~~~pe~vA~~~~~~~~~~~ 259 (293)
T PRK05866 238 --GLPALTADEAAEWMVTAARTRP 259 (293)
T ss_pred --CCCCCCHHHHHHHHHHHHhcCC
Confidence 1224678999999999998653
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.3e-16 Score=146.74 Aligned_cols=177 Identities=18% Similarity=0.113 Sum_probs=125.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc--cccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED--MFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
..+++|+||||+|+||++++++|+++|++|++++|+........ ...+.++.+|++|.+.+..+++ ++|+|
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 35689999999999999999999999999999999865422111 1136788999999988776653 68999
Q ss_pred EEcccccCCc-ccccCCcceehhhhHHHHHHHHH----HHHhCCCCeEEEeecccccCCCcccccccCCCCCC-CCCCCC
Q 017290 95 FNLAADMGGM-GFIQSNHSVIMYNNTMISFNMLE----ASRISGVKRFFYASSACIYPEFKQLETNVSLKESD-AWPAEP 168 (374)
Q Consensus 95 i~~a~~~~~~-~~~~~~~~~~~~~n~~~~~~ll~----a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~-~~~~~~ 168 (374)
||+|+..... .......+..+.+|+.++..+++ ++++.+..++|++||........ ...+.. ..+..+
T Consensus 104 i~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~------~~~~~~~~~~~~~ 177 (315)
T PRK06196 104 INNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPI------RWDDPHFTRGYDK 177 (315)
T ss_pred EECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCC------CccccCccCCCCh
Confidence 9999965321 11222345567889888655554 44555556999999965432111 011100 012334
Q ss_pred CCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCC
Q 017290 169 QDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPF 206 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~ 206 (374)
...|+.+|...+.+++.++.+ .++++++++||.+.++.
T Consensus 178 ~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~ 218 (315)
T PRK06196 178 WLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPL 218 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCc
Confidence 568999999999998888654 47999999999999875
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.4e-16 Score=139.90 Aligned_cols=213 Identities=13% Similarity=0.018 Sum_probs=138.0
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-cc------ccccceeEEecccchhhHhhhcc-------CC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-TE------DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
+|+||||||+|+||+.+++.|+++|++|+++.++..... .. ....+.++.+|+++.+.+..+++ ++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999999999999987654332111 10 11246788999999887766553 68
Q ss_pred CEEEEcccccCCc-cc---ccCCcceehhhhHHHHHHHHHHHH-hCC------CCeEEEeecccccCCCcccccccCCCC
Q 017290 92 DHVFNLAADMGGM-GF---IQSNHSVIMYNNTMISFNMLEASR-ISG------VKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 92 d~vi~~a~~~~~~-~~---~~~~~~~~~~~n~~~~~~ll~a~~-~~~------~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
|+|||+|+..... .. ...+.+..+.+|+.++..+++++. ... -.++|++||...+...
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~----------- 150 (248)
T PRK06947 82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGS----------- 150 (248)
T ss_pred CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCC-----------
Confidence 9999999964321 11 112234457889998888875433 221 1269999986543110
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
......|+.+|...+.+++.++.+. +++++++|||.+..+..... ... ...... ... .
T Consensus 151 -----~~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~---~~~-~~~~~~-~~~--~------- 211 (248)
T PRK06947 151 -----PNEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG---GQP-GRAARL-GAQ--T------- 211 (248)
T ss_pred -----CCCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc---CCH-HHHHHH-hhc--C-------
Confidence 0112469999999999998887664 79999999999987642110 011 111111 000 0
Q ss_pred ccccceeHHHHHHHHHhhhccCC----CCcEEecC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSDF----REPVNIGS 268 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~~----~~~~~i~~ 268 (374)
..-.....+|+++.++.++.++. +..+.+.+
T Consensus 212 ~~~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~g 246 (248)
T PRK06947 212 PLGRAGEADEVAETIVWLLSDAASYVTGALLDVGG 246 (248)
T ss_pred CCCCCcCHHHHHHHHHHHcCccccCcCCceEeeCC
Confidence 11124678999999999887652 45555543
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.2e-16 Score=139.79 Aligned_cols=212 Identities=16% Similarity=0.045 Sum_probs=144.8
Q ss_pred CCCCCeEEEEcCcc--hhHHHHHHHHHhCCCEEEEEeCCCCcc--------c-c--c------ccccceeEEecccchhh
Q 017290 23 PSEKLRISVTGAGG--FIASHIARRLKSEGHYIIASDWKKNEH--------M-T--E------DMFCHEFHLVDLRVMDN 83 (374)
Q Consensus 23 ~~~~~~ilItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~-~--~------~~~~i~~~~~dl~~~~~ 83 (374)
..++++||||||+| .||.++++.|+++|++|++++|++... . . . ....+.++.+|+++.++
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 81 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA 81 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 34568899999996 699999999999999999999873210 0 0 0 01246788999999887
Q ss_pred Hhhhcc-------CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHhC----CCCeEEEeecccccCCC
Q 017290 84 CLKVTK-------GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRIS----GVKRFFYASSACIYPEF 149 (374)
Q Consensus 84 ~~~~~~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~~----~~~~~i~~Ss~~vy~~~ 149 (374)
+..+++ ++|+|||+|+........+ .+.+..+.+|+.++..+++++... +..++|++||...+..
T Consensus 82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~- 160 (256)
T PRK12748 82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP- 160 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC-
Confidence 766553 5899999998643221222 223456889999999999887542 3358999999766532
Q ss_pred cccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhcc
Q 017290 150 KQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTS 226 (374)
Q Consensus 150 ~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~ 226 (374)
......|+.+|...+.+++.++.+ .+++++.++|+.+..+... .........
T Consensus 161 ----------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~--------~~~~~~~~~- 215 (256)
T PRK12748 161 ----------------MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT--------EELKHHLVP- 215 (256)
T ss_pred ----------------CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC--------hhHHHhhhc-
Confidence 123457999999999999888765 4799999999988754211 011111110
Q ss_pred CCceEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 227 TDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 227 ~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
. . ....+...+|+++++..++... .+.++++.++
T Consensus 216 ~----~-----~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 253 (256)
T PRK12748 216 K----F-----PQGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGG 253 (256)
T ss_pred c----C-----CCCCCcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence 0 0 1112445799999998887653 2567777654
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.7e-16 Score=142.96 Aligned_cols=163 Identities=15% Similarity=0.055 Sum_probs=122.4
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEEEEcc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHVFNLA 98 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi~~a 98 (374)
||++|||||+|+||+++++.|++.|++|++++|+..........++.++.+|+.+.+.+.++++ ++|+|||+|
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 5789999999999999999999999999999998654332222356788899999888776653 689999999
Q ss_pred cccCCccccc---CCcceehhhhHHHHHHHHHHHHh---CCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCch
Q 017290 99 ADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRI---SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAY 172 (374)
Q Consensus 99 ~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~---~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y 172 (374)
+........+ .+....+++|+.++..+++++.. .+..++|++||...+.. ......|
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~~~~~Y 143 (274)
T PRK05693 81 GYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLV-----------------TPFAGAY 143 (274)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCC-----------------CCCccHH
Confidence 9643211212 23445688999998888887633 23358999998654321 1234679
Q ss_pred HHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCC
Q 017290 173 GLEKLASEELCKHYTKD---FGIECRVGRFHNIYGP 205 (374)
Q Consensus 173 ~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~ 205 (374)
+.+|...+.+++.++.+ .++++++++||.+..+
T Consensus 144 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~ 179 (274)
T PRK05693 144 CASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ 179 (274)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence 99999999998887654 5899999999999765
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.6e-16 Score=139.85 Aligned_cols=205 Identities=20% Similarity=0.104 Sum_probs=136.1
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC-Ccccccc--------cccceeEEecccchhhHhhhcc-------CC
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKK-NEHMTED--------MFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~--------~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
+|+||||+|+||+++++.|+++|++|++++|+. +...... ...+..+.+|+.+.+.+.++++ ++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 489999999999999999999999999999873 2211100 0112357789999887766553 68
Q ss_pred CEEEEcccccCCccccc---CCcceehhhhHH----HHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFIQ---SNHSVIMYNNTM----ISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~----~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|+|||+++........+ .+....+++|+. .+..++.++++.+.+++|++||...+...
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~--------------- 145 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAE--------------- 145 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCC---------------
Confidence 99999998754211111 123445667777 66777788877777799999998765421
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhh-----CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDF-----GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
.....|+.+|...+.+++.++.+. +++++.++|+.+.++................. +. ...+.
T Consensus 146 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~-~~---------~~~~~ 213 (251)
T PRK07069 146 --PDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRK-LA---------RGVPL 213 (251)
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHH-Hh---------ccCCC
Confidence 233579999999999999887652 37889999999987742100000000001111 10 11122
Q ss_pred ccceeHHHHHHHHHhhhccC
Q 017290 240 RSFTFIDECVEGVLRLTKSD 259 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~ 259 (374)
..+.+.+|++++++.++..+
T Consensus 214 ~~~~~~~~va~~~~~l~~~~ 233 (251)
T PRK07069 214 GRLGEPDDVAHAVLYLASDE 233 (251)
T ss_pred CCCcCHHHHHHHHHHHcCcc
Confidence 34568999999999887654
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.9e-16 Score=143.00 Aligned_cols=219 Identities=13% Similarity=0.049 Sum_probs=146.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
..+++++||||+|.||+++++.|+++|++|++++|+....... ...++.++.+|+.+.+.+..+++ +
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999976432111 11245778999999887776553 7
Q ss_pred CCEEEEcccccCCcc------------------cccCCcceehhhhHHHHHHHHHH----HHhCCCCeEEEeecccccCC
Q 017290 91 VDHVFNLAADMGGMG------------------FIQSNHSVIMYNNTMISFNMLEA----SRISGVKRFFYASSACIYPE 148 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~------------------~~~~~~~~~~~~n~~~~~~ll~a----~~~~~~~~~i~~Ss~~vy~~ 148 (374)
+|++||+|+...... ....+....+++|+.+...++++ +++.+..++|++||...+.
T Consensus 88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~- 166 (278)
T PRK08277 88 CDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT- 166 (278)
T ss_pred CCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC-
Confidence 899999999542110 11122344577888887765544 3445556899999987653
Q ss_pred CcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCC--CCCcHHHHHHHH
Q 017290 149 FKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKG--MEKAPAAFCRKA 223 (374)
Q Consensus 149 ~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~ 223 (374)
+......|+.+|...+.+++.++.+. ++++.+++|+.+..+...... ............
T Consensus 167 ----------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~ 230 (278)
T PRK08277 167 ----------------PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKI 230 (278)
T ss_pred ----------------CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHH
Confidence 22334679999999999999988764 699999999999877421000 000000111111
Q ss_pred hccCCceEeeCCCcccccceeHHHHHHHHHhhhcc-C----CCCcEEecCC
Q 017290 224 LTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS-D----FREPVNIGSD 269 (374)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~-~----~~~~~~i~~~ 269 (374)
. .......+...+|+|++++.++.. . .+..+.+.++
T Consensus 231 ~----------~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG 271 (278)
T PRK08277 231 L----------AHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271 (278)
T ss_pred h----------ccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence 1 111223467789999999998876 3 2555666554
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.3e-16 Score=135.63 Aligned_cols=204 Identities=15% Similarity=0.082 Sum_probs=148.7
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-------cccceeEEecccchhhHhhhcc------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-------MFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
++++++++|||||+-||.++++.|.++||+|+.+.|+.++..... ...+.++..|+++.+.+..+.+
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 456789999999999999999999999999999999987533221 1246789999999998887663
Q ss_pred -CCCEEEEcccccCCcccccCC---cceehhhhHHHHHHHHHH----HHhCCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 -GVDHVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNMLEA----SRISGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~~~~~---~~~~~~~n~~~~~~ll~a----~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
.+|++|+|||......+.+.+ ..+.+++|+.+...+..+ +.+.+..++|+++|...|-
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~-------------- 148 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLI-------------- 148 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcC--------------
Confidence 699999999976533344433 345688999876555544 4455555999999987763
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
|..-...|+.||...-.+.+.+..+ .|+.++.+.||.+.-.+.. .. +..... ...
T Consensus 149 ---p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~---------------~~-~~~~~~---~~~ 206 (265)
T COG0300 149 ---PTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD---------------AK-GSDVYL---LSP 206 (265)
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc---------------cc-cccccc---ccc
Confidence 2223478999999998888777655 4699999999999866421 00 011111 112
Q ss_pred cccceeHHHHHHHHHhhhccCCCC
Q 017290 239 TRSFTFIDECVEGVLRLTKSDFRE 262 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~~~~ 262 (374)
.+-++..+|+|+..+..+++....
T Consensus 207 ~~~~~~~~~va~~~~~~l~~~k~~ 230 (265)
T COG0300 207 GELVLSPEDVAEAALKALEKGKRE 230 (265)
T ss_pred hhhccCHHHHHHHHHHHHhcCCce
Confidence 345788999999999999876543
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-15 Score=136.18 Aligned_cols=218 Identities=16% Similarity=0.043 Sum_probs=147.1
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
....+++|||||+|.||+++++.|++.|++|++++|+....... ....+.++.+|+.+.+.+.++++
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL 84 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 34568999999999999999999999999999999875431110 11245678899999887776654
Q ss_pred -CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 -GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|++||+|+...... ....+.+..+++|+.++..+++++ ++.+..++|++||...+...
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------ 152 (254)
T PRK06114 85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN------------ 152 (254)
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC------------
Confidence 5799999999753211 122334556888998887776654 34445589999997543211
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
+..+...|+.+|...+.+++.++.+ .++++.+++||.+..+.... .......... .... +
T Consensus 153 ---~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~----~~~~~~~~~~-~~~~---------p 215 (254)
T PRK06114 153 ---RGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTR----PEMVHQTKLF-EEQT---------P 215 (254)
T ss_pred ---CCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccc----ccchHHHHHH-HhcC---------C
Confidence 1112467999999999999988764 47999999999998764211 0011111111 1111 1
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
...+...+|++.+++.++... .+.++.+.++
T Consensus 216 ~~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg 250 (254)
T PRK06114 216 MQRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGG 250 (254)
T ss_pred CCCCcCHHHHHHHHHHHcCccccCcCCceEEECcC
Confidence 123567899999999988654 2566666654
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=8.5e-16 Score=135.38 Aligned_cols=214 Identities=14% Similarity=0.046 Sum_probs=143.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-cc-ccccceeEEecccchhhHhhhcc---CCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-TE-DMFCHEFHLVDLRVMDNCLKVTK---GVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~-~~~~i~~~~~dl~~~~~~~~~~~---~~d~vi~~a 98 (374)
.++++||||||+|.||+++++.|+++|++|+++.++..... .. ...++.++.+|+++.+.+.+.++ ++|++||+|
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a 83 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA 83 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence 34689999999999999999999999999988766432211 11 11235677899999887776664 589999999
Q ss_pred cccCCcc---cccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchH
Q 017290 99 ADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 173 (374)
Q Consensus 99 ~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~ 173 (374)
+...... ....+.+..+++|+.++..++..+... ...++|++||..... . +..+...|+
T Consensus 84 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~--------------~--~~~~~~~Y~ 147 (237)
T PRK12742 84 GIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR--------------M--PVAGMAAYA 147 (237)
T ss_pred CCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc--------------C--CCCCCcchH
Confidence 8643211 122334567889999988887655442 234899999964311 0 223456899
Q ss_pred HhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHH
Q 017290 174 LEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE 250 (374)
Q Consensus 174 ~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 250 (374)
.+|...|.+++.++.+ .++++++++||.+..+... ... .... .+... . ....+...+|+++
T Consensus 148 ~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~----~~~--~~~~-~~~~~--~-------~~~~~~~p~~~a~ 211 (237)
T PRK12742 148 ASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANP----ANG--PMKD-MMHSF--M-------AIKRHGRPEEVAG 211 (237)
T ss_pred HhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccc----ccc--HHHH-HHHhc--C-------CCCCCCCHHHHHH
Confidence 9999999999888765 4699999999999765321 000 1111 11110 0 1123578899999
Q ss_pred HHHhhhccC----CCCcEEecCC
Q 017290 251 GVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 251 ~i~~~~~~~----~~~~~~i~~~ 269 (374)
++..++... .+..+.+.++
T Consensus 212 ~~~~l~s~~~~~~~G~~~~~dgg 234 (237)
T PRK12742 212 MVAWLAGPEASFVTGAMHTIDGA 234 (237)
T ss_pred HHHHHcCcccCcccCCEEEeCCC
Confidence 999988654 2455555543
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.3e-16 Score=141.21 Aligned_cols=163 Identities=13% Similarity=0.022 Sum_probs=120.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-ccccccceeEEecccchhhHhhhcc-----------CCCE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-TEDMFCHEFHLVDLRVMDNCLKVTK-----------GVDH 93 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~i~~~~~dl~~~~~~~~~~~-----------~~d~ 93 (374)
||++|||||+|+||++++++|+++|++|++++|+..... ......+.++.+|+.+.+.+..++. ++|+
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 579999999999999999999999999999999765322 1112246788999999887776331 5789
Q ss_pred EEEcccccCCcc-c---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 94 VFNLAADMGGMG-F---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 94 vi~~a~~~~~~~-~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
+||+++...... . ........+++|+.++..+.+.+. +.+..++|++||...+. +
T Consensus 81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------------~ 143 (243)
T PRK07023 81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN-----------------A 143 (243)
T ss_pred EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC-----------------C
Confidence 999998653211 1 112335567889988666655443 34456999999976643 2
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhh--hCCcEEEEeeCcccCC
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKD--FGIECRVGRFHNIYGP 205 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~--~~~~~~ilR~~~v~g~ 205 (374)
..+...|+.+|...|.+++.++.+ .++++..++|+.+-.+
T Consensus 144 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 144 YAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred CCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 234568999999999999988864 4799999999987543
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.6e-16 Score=140.15 Aligned_cols=218 Identities=17% Similarity=0.060 Sum_probs=147.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
..+++++||||+|.||++++++|++.|++|++++|+..+.... ....+.++.+|+++.+.+..+++ +
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 3568999999999999999999999999999999986542211 11246788999999888777654 5
Q ss_pred CCEEEEcccccCCcc-c---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 91 VDHVFNLAADMGGMG-F---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~-~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
+|+|||+++...... . ...+.+..+.+|+.++..+++++ .+.+..++|++||...+..
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~-------------- 150 (253)
T PRK06172 85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGA-------------- 150 (253)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccC--------------
Confidence 699999999642111 1 12234456778998887666543 3445568999999766542
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
......|+.+|...+.+++.++.+. ++++.++.||.+-.+..... .. ........... ....
T Consensus 151 ---~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~-~~-~~~~~~~~~~~----------~~~~ 215 (253)
T PRK06172 151 ---APKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRA-YE-ADPRKAEFAAA----------MHPV 215 (253)
T ss_pred ---CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhh-cc-cChHHHHHHhc----------cCCC
Confidence 2234679999999999999988764 69999999998865531100 00 00111111110 1112
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
..+...+|+++.++.++... .+..+.+.++.
T Consensus 216 ~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~ 250 (253)
T PRK06172 216 GRIGKVEEVASAVLYLCSDGASFTTGHALMVDGGA 250 (253)
T ss_pred CCccCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 24578899999999988754 35666766653
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.4e-16 Score=135.90 Aligned_cols=213 Identities=16% Similarity=0.089 Sum_probs=141.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-c------cccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-T------EDMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~------~~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
.++.++||||+|+||+++++.|++.|+.|+++.+...... . .....+.++.+|+.|.+.+..+++ +
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4578999999999999999999999999888654322110 0 011235567899999887776653 6
Q ss_pred CCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHH----HHhCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 91 VDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEA----SRISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a----~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+|+|||+|+...... ....+.+..+++|+.++..+.++ +++.+..++|++||.....
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---------------- 145 (246)
T PRK12938 82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK---------------- 145 (246)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC----------------
Confidence 899999999653211 12233455678888886665554 4456667999999964321
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
+......|+.+|...+.+++.++.+ .++++.+++|+.+..+... ......+..... . ....
T Consensus 146 -~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~-----~~~~~~~~~~~~-~---------~~~~ 209 (246)
T PRK12938 146 -GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK-----AIRPDVLEKIVA-T---------IPVR 209 (246)
T ss_pred -CCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhh-----hcChHHHHHHHh-c---------CCcc
Confidence 1224568999999999888887654 4799999999999876421 111222222111 1 1123
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
.+...+|++.+++.++..+ .+..+.+.++
T Consensus 210 ~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g 242 (246)
T PRK12938 210 RLGSPDEIGSIVAWLASEESGFSTGADFSLNGG 242 (246)
T ss_pred CCcCHHHHHHHHHHHcCcccCCccCcEEEECCc
Confidence 4567899999999888654 2455666544
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.8e-16 Score=138.73 Aligned_cols=205 Identities=13% Similarity=0.061 Sum_probs=141.7
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-----cccceeEEecccchhhHhhhcc------CC
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-----MFCHEFHLVDLRVMDNCLKVTK------GV 91 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~i~~~~~dl~~~~~~~~~~~------~~ 91 (374)
.+.++++|||||+|+||.++++.|+++|++|++++|++....... ...+.++.+|+.|.+.+..+++ ++
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGI 81 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCC
Confidence 345689999999999999999999999999999999865322111 1256788999999887766543 68
Q ss_pred CEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|+|||+|+........+ ......+++|+.++..+++++.. .+..++|++||...+.
T Consensus 82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------------- 144 (263)
T PRK09072 82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSI----------------- 144 (263)
T ss_pred CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCc-----------------
Confidence 99999998653211111 22345677999998888887643 3345899998864421
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
+......|+.+|...+.+++.++.+ .++.++++.|+.+..+... .. . .. . .......
T Consensus 145 ~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~---------~~----~--~~---~--~~~~~~~ 204 (263)
T PRK09072 145 GYPGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNS---------EA----V--QA---L--NRALGNA 204 (263)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchh---------hh----c--cc---c--cccccCC
Confidence 1122357999999999888888755 4688999999887654210 00 0 00 0 0000123
Q ss_pred ceeHHHHHHHHHhhhccCCCCcE
Q 017290 242 FTFIDECVEGVLRLTKSDFREPV 264 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~~~~~~ 264 (374)
....+|+|++++.++++...++|
T Consensus 205 ~~~~~~va~~i~~~~~~~~~~~~ 227 (263)
T PRK09072 205 MDDPEDVAAAVLQAIEKERAERW 227 (263)
T ss_pred CCCHHHHHHHHHHHHhCCCCEEe
Confidence 56889999999999998765443
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.3e-16 Score=138.31 Aligned_cols=217 Identities=14% Similarity=0.013 Sum_probs=146.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
++++++||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|+.+.+.+.++++ .+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 568999999999999999999999999999999986532211 11246788999999988876654 67999
Q ss_pred EEcccccCCc--ccccCCcceehhhhHHHHHHHHHHHHh---CCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 95 FNLAADMGGM--GFIQSNHSVIMYNNTMISFNMLEASRI---SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 95 i~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~ll~a~~~---~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
||+|+..... .....+....+++|+.++..+++++.. .+..++|++||...+. +....
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~-----------------~~~~~ 147 (261)
T PRK08265 85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKF-----------------AQTGR 147 (261)
T ss_pred EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhcc-----------------CCCCC
Confidence 9999964311 112223455678899988888876543 2234899999965432 11224
Q ss_pred CchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHH
Q 017290 170 DAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFID 246 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 246 (374)
..|+.+|...+.+++.++.+ .++++.+++||.+..+..... ..... ........ .......+...+
T Consensus 148 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~-~~~~~-~~~~~~~~---------~~~p~~r~~~p~ 216 (261)
T PRK08265 148 WLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDEL-SGGDR-AKADRVAA---------PFHLLGRVGDPE 216 (261)
T ss_pred chhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhh-cccch-hHHHHhhc---------ccCCCCCccCHH
Confidence 57999999999999988765 379999999998865521100 00000 00000000 001122356789
Q ss_pred HHHHHHHhhhccC----CCCcEEecCC
Q 017290 247 ECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 247 Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
|+|++++.++... .+..+.+.++
T Consensus 217 dva~~~~~l~s~~~~~~tG~~i~vdgg 243 (261)
T PRK08265 217 EVAQVVAFLCSDAASFVTGADYAVDGG 243 (261)
T ss_pred HHHHHHHHHcCccccCccCcEEEECCC
Confidence 9999999998754 2566777655
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4e-16 Score=138.94 Aligned_cols=218 Identities=12% Similarity=-0.023 Sum_probs=147.8
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
++..++++|||||+|.||+++++.|++.|++|++++|+....... ....+..+.+|+++.+.+.++++
T Consensus 5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL 84 (253)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 344678999999999999999999999999999999976432111 11245678899999888777654
Q ss_pred -CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccccCCCcccccccCCCC
Q 017290 90 -GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+++....... ...+.+..+++|+.++..+++++.. .+ ..++|++||.......
T Consensus 85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------- 153 (253)
T PRK05867 85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN----------- 153 (253)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC-----------
Confidence 78999999997532111 1223345578999998888887643 22 2378999886432100
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
.......|+.+|...+.+++.++.+ .++++.+++||.+-.+... .. ...... .....
T Consensus 154 ----~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~-----~~-~~~~~~-~~~~~--------- 213 (253)
T PRK05867 154 ----VPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVE-----PY-TEYQPL-WEPKI--------- 213 (253)
T ss_pred ----CCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccc-----cc-hHHHHH-HHhcC---------
Confidence 0112357999999999999998765 4799999999999765321 11 111111 11111
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
..-.+...+|+|++++.++... .+.++.+.++.
T Consensus 214 ~~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~ 250 (253)
T PRK05867 214 PLGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGGY 250 (253)
T ss_pred CCCCCcCHHHHHHHHHHHcCcccCCcCCCeEEECCCc
Confidence 1124678899999999998754 25667776653
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.8e-16 Score=136.86 Aligned_cols=217 Identities=13% Similarity=0.066 Sum_probs=147.1
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc----cccccceeEEecccchhhHhhhcc-------CC
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT----EDMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
...+|++|||||+|.||++++++|+++|++|++++|+...... ....++.++.+|+++.+++.++++ ++
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence 4467899999999999999999999999999999886432110 011246788999999988877764 68
Q ss_pred CEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 92 DHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 92 d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
|++||+|+...... ....+.+..+++|+.++..+.+++.. .+ ..++|++||...+...
T Consensus 85 D~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-------------- 150 (251)
T PRK12481 85 DILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG-------------- 150 (251)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC--------------
Confidence 99999999653211 12234556788999988888776542 32 2489999998665321
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
.....|+.+|...+.+++.++.+ .++++..++||.+-.+.... ... .......... . + +.-
T Consensus 151 ---~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~--~~~-~~~~~~~~~~---~--~-----p~~ 214 (251)
T PRK12481 151 ---IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAA--LRA-DTARNEAILE---R--I-----PAS 214 (251)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhh--ccc-ChHHHHHHHh---c--C-----CCC
Confidence 12357999999999999988764 47999999999986542110 000 0011111111 0 1 112
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
.+...+|+|.++..++... .+..+.+.++
T Consensus 215 ~~~~peeva~~~~~L~s~~~~~~~G~~i~vdgg 247 (251)
T PRK12481 215 RWGTPDDLAGPAIFLSSSASDYVTGYTLAVDGG 247 (251)
T ss_pred CCcCHHHHHHHHHHHhCccccCcCCceEEECCC
Confidence 3678899999999988653 2455555544
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.7e-16 Score=138.08 Aligned_cols=217 Identities=18% Similarity=0.119 Sum_probs=141.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-ccccceeEEecccchhhHhhhcc-------CCCEEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-DMFCHEFHLVDLRVMDNCLKVTK-------GVDHVF 95 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi 95 (374)
+.+++|+||||+|+||.+++++|+++|++|++++|+....... ......++.+|+++.+.+.++++ ++|+||
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 84 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF 84 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3568999999999999999999999999999999976532211 11123678899999888877764 579999
Q ss_pred EcccccCCc--cc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeeccc-ccCCCcccccccCCCCCCCCC
Q 017290 96 NLAADMGGM--GF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSAC-IYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 96 ~~a~~~~~~--~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~-vy~~~~~~~~~~~~~e~~~~~ 165 (374)
|+|+..... .. .....+..+++|+.++..+++++ ++.+..++|++||.. +++.
T Consensus 85 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~----------------- 147 (255)
T PRK06057 85 NNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS----------------- 147 (255)
T ss_pred ECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC-----------------
Confidence 999864211 01 11123456778888877766654 344445899998853 4432
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccc
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (374)
..+...|+.+|...+.+++.++.+ .++++++++||.+.++..... ........ ...+. .+ ....+
T Consensus 148 ~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~-~~~~~~~~-~~~~~-----~~-----~~~~~ 215 (255)
T PRK06057 148 ATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQEL-FAKDPERA-ARRLV-----HV-----PMGRF 215 (255)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhh-ccCCHHHH-HHHHh-----cC-----CCCCC
Confidence 112357999998777777765432 379999999999987642110 00001111 11110 01 11247
Q ss_pred eeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 243 TFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
...+|+++++..++... .+..+.+.++
T Consensus 216 ~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g 246 (255)
T PRK06057 216 AEPEEIAAAVAFLASDDASFITASTFLVDGG 246 (255)
T ss_pred cCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 88999999998877653 2555666554
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.2e-16 Score=138.16 Aligned_cols=220 Identities=14% Similarity=0.056 Sum_probs=148.8
Q ss_pred CCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc--c--ccccceeEEecccchhhHhhhcc------
Q 017290 20 PYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT--E--DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 20 ~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~--~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+++...+++++||||+|.||++++++|++.|++|+++++....... . ....+.++.+|+++.+++.++++
T Consensus 4 ~~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (253)
T PRK08993 4 DAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEF 83 (253)
T ss_pred cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 3445567899999999999999999999999999988775432110 0 11245778899999888877664
Q ss_pred -CCCEEEEcccccCCc---ccccCCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccccCCCcccccccCCCC
Q 017290 90 -GVDHVFNLAADMGGM---GFIQSNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+|+..... +....+.+..+.+|+.++..+++++.. .+ -.++|++||...+...
T Consensus 84 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 152 (253)
T PRK08993 84 GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG----------- 152 (253)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC-----------
Confidence 689999999964321 122334566788999999888887643 22 2389999998765421
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
.....|+.+|...+.+++.++.+ .++++..++||.+-.+..... .. .......... .+
T Consensus 153 ------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~--~~-~~~~~~~~~~---~~------- 213 (253)
T PRK08993 153 ------IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQL--RA-DEQRSAEILD---RI------- 213 (253)
T ss_pred ------CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhh--cc-chHHHHHHHh---cC-------
Confidence 12357999999999999988765 479999999999976531100 00 0011111110 11
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
+...+...+|+|.++..++... .+..+.+.++
T Consensus 214 p~~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~dgg 249 (253)
T PRK08993 214 PAGRWGLPSDLMGPVVFLASSASDYINGYTIAVDGG 249 (253)
T ss_pred CCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 1123677899999999988754 2455555443
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.6e-16 Score=137.01 Aligned_cols=220 Identities=15% Similarity=0.063 Sum_probs=149.6
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCE-EEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
+..++|+||||+|.||+++++.|++.|++ |++++|+..+.... ....+.++.+|+.+.+.+.++++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 35689999999999999999999999998 99999875432211 11235678899999888777654
Q ss_pred CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|++||+++........+ ......+..|+.++.++++++.. .+ ..++|++||...++..
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~------------ 151 (260)
T PRK06198 84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ------------ 151 (260)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC------------
Confidence 5899999999653211112 12244578899999888877643 22 2479999998765421
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCC--CCCcHHHHHHHHhccCCceEeeCCC
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKG--MEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
.....|+.+|...|.+++.++.+. ++.++.++|+.++++...... .......++.... . .
T Consensus 152 -----~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~-~---------~ 216 (260)
T PRK06198 152 -----PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAA-A---------T 216 (260)
T ss_pred -----CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHh-c---------c
Confidence 224679999999999999887654 588999999999887531100 0001112222111 0 1
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.....+++.+|+++++..++... .++++++.++.
T Consensus 217 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~ 254 (260)
T PRK06198 217 QPFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQSV 254 (260)
T ss_pred CCccCCcCHHHHHHHHHHHcChhhCCccCceEeECCcc
Confidence 12235689999999999988643 35667776543
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1e-15 Score=137.31 Aligned_cols=222 Identities=14% Similarity=0.056 Sum_probs=149.1
Q ss_pred CCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-----
Q 017290 21 YWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 21 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
.+.+.+++++||||+|.||.+++++|+++|++|+++.|+....... ...++.++.+|+++.+.+.++++
T Consensus 5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE 84 (265)
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 3455678999999999999999999999999999998876532111 11246788999999988877764
Q ss_pred --CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 --GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+++....... ........+.+|+.++..++.++. +.+..++|++||.....
T Consensus 85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------- 151 (265)
T PRK07097 85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL------------- 151 (265)
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccC-------------
Confidence 58999999997542211 222344557788888877766553 34556999999963311
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCC---CCcHHHHHHHHhccCCceEeeC
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGM---EKAPAAFCRKALTSTDKFEMWG 234 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 234 (374)
+..+...|+.+|...+.+++.++.+. ++.+..++||.+..+....... ......+...... .
T Consensus 152 ----~~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~------- 219 (265)
T PRK07097 152 ----GRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIA-K------- 219 (265)
T ss_pred ----CCCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHh-c-------
Confidence 11234689999999999999998764 7999999999998764211000 0000001111110 0
Q ss_pred CCcccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
.....+...+|+|..+..++... .+..+.+.++
T Consensus 220 --~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg 256 (265)
T PRK07097 220 --TPAARWGDPEDLAGPAVFLASDASNFVNGHILYVDGG 256 (265)
T ss_pred --CCccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCC
Confidence 01223567899999999998763 2455565554
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.1e-16 Score=137.82 Aligned_cols=219 Identities=14% Similarity=0.039 Sum_probs=144.9
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
|..+++++|||||+|.||++++++|++.|++|++++|+....... ....+.++.+|+++.+.+..+++
T Consensus 5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF 84 (264)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 344668999999999999999999999999999999986532211 11234678899999888777654
Q ss_pred -CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhC---CCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 -GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRIS---GVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~---~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|++||+|+....... ...+....+++|+.++.++++++... ...++|++||...+.
T Consensus 85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~--------------- 149 (264)
T PRK07576 85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV--------------- 149 (264)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc---------------
Confidence 57999999975321111 12223445779999999998876542 124899999965431
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+......|+.+|...+.+++.++.+ .+++++.++|+.+.+..... ............. .....
T Consensus 150 --~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~---~~~~~~~~~~~~~---------~~~~~ 215 (264)
T PRK07576 150 --PMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMA---RLAPSPELQAAVA---------QSVPL 215 (264)
T ss_pred --CCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHh---hcccCHHHHHHHH---------hcCCC
Confidence 1223468999999999999988765 46899999999887532100 0000001111111 00112
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
..+...+|+|++++.++..+ .+..+.+.++
T Consensus 216 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~gg 249 (264)
T PRK07576 216 KRNGTKQDIANAALFLASDMASYITGVVLPVDGG 249 (264)
T ss_pred CCCCCHHHHHHHHHHHcChhhcCccCCEEEECCC
Confidence 34677899999999998753 2444555544
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.6e-15 Score=139.75 Aligned_cols=203 Identities=12% Similarity=-0.001 Sum_probs=142.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhc-------cC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVT-------KG 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~-------~~ 90 (374)
..+++|+||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|++|.+++.+++ .+
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 3568999999999999999999999999999999986542211 1123567889999998887766 36
Q ss_pred CCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+|++||+|+......+.+ .+.+..+++|+.++.+++.++ ++.+..++|++||...+..
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~--------------- 149 (330)
T PRK06139 85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAA--------------- 149 (330)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCC---------------
Confidence 899999999653222222 223456889999888877665 3444458999999765431
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh----hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD----FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
......|+.+|...+.+.+.+..+ .++.++.+.|+.+..+..... . ... +. .....
T Consensus 150 --~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~-----~-----~~~--~~------~~~~~ 209 (330)
T PRK06139 150 --QPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHG-----A-----NYT--GR------RLTPP 209 (330)
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccc-----c-----ccc--cc------cccCC
Confidence 122468999999888888777654 368999999999987742110 0 000 00 00112
Q ss_pred ccceeHHHHHHHHHhhhccCCC
Q 017290 240 RSFTFIDECVEGVLRLTKSDFR 261 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~~~ 261 (374)
.++++.+|+|++++.+++++..
T Consensus 210 ~~~~~pe~vA~~il~~~~~~~~ 231 (330)
T PRK06139 210 PPVYDPRRVAKAVVRLADRPRA 231 (330)
T ss_pred CCCCCHHHHHHHHHHHHhCCCC
Confidence 3467899999999999987654
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.3e-15 Score=132.53 Aligned_cols=212 Identities=16% Similarity=0.103 Sum_probs=142.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-ccccceeEEecccchhhHhhhcc-------CCCEEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-DMFCHEFHLVDLRVMDNCLKVTK-------GVDHVFN 96 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi~ 96 (374)
++|++|||||+|.||+++++.|+++|++|++++|++...... ...++.++.+|+.+.+.+..+++ ++|++||
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 357899999999999999999999999999999986532211 12246788999999887766553 5899999
Q ss_pred cccccCCc---ccccCCcceehhhhHHHHHHHHHHHH----hCC--CCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 97 LAADMGGM---GFIQSNHSVIMYNNTMISFNMLEASR----ISG--VKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 97 ~a~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
+|+..... .....+.+..+.+|+.++..+.+++. +.+ ..++|++||..... +..
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~-----------------~~~ 143 (236)
T PRK06483 81 NASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK-----------------GSD 143 (236)
T ss_pred CCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc-----------------CCC
Confidence 99964221 11123345567888888776665553 333 34899998864321 112
Q ss_pred CCCchHHhHHHHHHHHHHHHhhh--CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeH
Q 017290 168 PQDAYGLEKLASEELCKHYTKDF--GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
....|+.+|...|.+++.++.+. ++++.+++||.+.-.... .......... ..+ .-.+...
T Consensus 144 ~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~-------~~~~~~~~~~-~~~---------~~~~~~~ 206 (236)
T PRK06483 144 KHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD-------DAAYRQKALA-KSL---------LKIEPGE 206 (236)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC-------CHHHHHHHhc-cCc---------cccCCCH
Confidence 34579999999999999998875 488999999988432110 0111111111 111 1124468
Q ss_pred HHHHHHHHhhhccC--CCCcEEecCCC
Q 017290 246 DECVEGVLRLTKSD--FREPVNIGSDE 270 (374)
Q Consensus 246 ~Dva~~i~~~~~~~--~~~~~~i~~~~ 270 (374)
+|+++++..++... .+.++.+.++.
T Consensus 207 ~~va~~~~~l~~~~~~~G~~i~vdgg~ 233 (236)
T PRK06483 207 EEIIDLVDYLLTSCYVTGRSLPVDGGR 233 (236)
T ss_pred HHHHHHHHHHhcCCCcCCcEEEeCccc
Confidence 99999999988643 35666666553
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.4e-15 Score=131.88 Aligned_cols=212 Identities=17% Similarity=0.115 Sum_probs=141.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-c------cccccceeEEecccchhhHhhhcc-------CCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-T------EDMFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~------~~~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
|.+|||||+|+||+++++.|+++|++|+++.|...... . .....+.++.+|+.+.+.+.++++ ++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 57999999999999999999999999999988322111 0 011246788999999887766553 589
Q ss_pred EEEEcccccCCccc---ccCCcceehhhhHHHHHHHH----HHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 93 HVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNML----EASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 93 ~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll----~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
+|||+++....... ...+....+..|+.++..++ ..+++.+..++|++||..... +
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------------~ 143 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQK-----------------G 143 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC-----------------C
Confidence 99999986432111 11233445678888866654 444566667999999964321 1
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccc
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (374)
......|+.+|...+.+++.++.+ .+++++.++|+.+.++... .....++..... .. ....+
T Consensus 144 ~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~-----~~~~~~~~~~~~-~~---------~~~~~ 208 (242)
T TIGR01829 144 QFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVM-----AMREDVLNSIVA-QI---------PVGRL 208 (242)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccc-----ccchHHHHHHHh-cC---------CCCCC
Confidence 123457999999999888887654 4799999999999876421 112222222211 11 11124
Q ss_pred eeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 243 TFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
...+|+++++..++..+ .+..+.+.++.
T Consensus 209 ~~~~~~a~~~~~l~~~~~~~~~G~~~~~~gg~ 240 (242)
T TIGR01829 209 GRPEEIAAAVAFLASEEAGYITGATLSINGGL 240 (242)
T ss_pred cCHHHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence 56689999988877654 36677777653
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.9e-15 Score=135.36 Aligned_cols=223 Identities=14% Similarity=0.024 Sum_probs=147.4
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~------~ 90 (374)
.+++++|||||+|.||+++++.|+++|++|++++|+....... ...++.++.+|++|.+.+..+++ +
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 4568999999999999999999999999999999976432111 01246788999999988877764 5
Q ss_pred CCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHH----HHHhCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLE----ASRISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~----a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+|++||+++....... ...+.+..+++|+.+...+++ .+++.+..++|++||...+.
T Consensus 86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~---------------- 149 (263)
T PRK08339 86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKE---------------- 149 (263)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccC----------------
Confidence 8999999986432111 223344567788776555544 44455556999999976532
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCC-----CCC-CcHHHHHHHHhccCCceEeeC
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWK-----GME-KAPAAFCRKALTSTDKFEMWG 234 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~ 234 (374)
+......|+.+|...+.+.+.++.+ .|+++..+.||.+..+..... ... ......... +.
T Consensus 150 -~~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~--------- 218 (263)
T PRK08339 150 -PIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQE-YA--------- 218 (263)
T ss_pred -CCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHH-Hh---------
Confidence 1122357999999999999888765 369999999999865421000 000 000011111 11
Q ss_pred CCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
...+...+...+|+|.++..++... .+.++.+.++...+
T Consensus 219 ~~~p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~ 261 (263)
T PRK08339 219 KPIPLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS 261 (263)
T ss_pred ccCCcccCcCHHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence 0111234677899999999988653 35667776665544
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.1e-16 Score=139.41 Aligned_cols=206 Identities=14% Similarity=0.065 Sum_probs=133.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc----cccccceeEEecccchhhHhhhccCC----------
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT----EDMFCHEFHLVDLRVMDNCLKVTKGV---------- 91 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~i~~~~~dl~~~~~~~~~~~~~---------- 91 (374)
||+++||||+|+||++++++|+++|++|++++|++.+... ....+++++.+|+++.+++..+++.+
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 80 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS 80 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence 4789999999999999999999999999999998632111 11235678899999998887776421
Q ss_pred -CEEEEcccccCCcc----cccCCcceehhhhHHHHHHHHHHH----HhC-CCCeEEEeecccccCCCcccccccCCCCC
Q 017290 92 -DHVFNLAADMGGMG----FIQSNHSVIMYNNTMISFNMLEAS----RIS-GVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 92 -d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~a~----~~~-~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
.++||+++...... ....+....+++|+.+...+++++ ++. +..++|++||...+.
T Consensus 81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-------------- 146 (251)
T PRK06924 81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN-------------- 146 (251)
T ss_pred ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC--------------
Confidence 27899998643211 112223445677887765555544 333 345899999975532
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh-----hCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEeeCC
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD-----FGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
+..+...|+.+|...+.+++.++.+ .++++..++||.+-.+...... ........+..... ..
T Consensus 147 ---~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~-- 215 (251)
T PRK06924 147 ---PYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFIT------LK-- 215 (251)
T ss_pred ---CCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHH------Hh--
Confidence 2334578999999999999988755 3688999999987644210000 00000000111110 00
Q ss_pred CcccccceeHHHHHHHHHhhhcc
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKS 258 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~ 258 (374)
..-.+...+|+|+.++.++..
T Consensus 216 --~~~~~~~~~dva~~~~~l~~~ 236 (251)
T PRK06924 216 --EEGKLLSPEYVAKALRNLLET 236 (251)
T ss_pred --hcCCcCCHHHHHHHHHHHHhc
Confidence 011357889999999999876
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.4e-15 Score=134.64 Aligned_cols=219 Identities=18% Similarity=0.077 Sum_probs=145.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc-------CCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
.+++++||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|+.+.+++..+++ ++|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 458999999999999999999999999999999875311100 11245678899999888777654 679
Q ss_pred EEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
+|||+++........ ..+.+..++.|+.++..+++++.. .+..++|++||...... +
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------------~ 148 (263)
T PRK08226 85 ILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV----------------A 148 (263)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc----------------C
Confidence 999999964321111 122334578899999888887643 34458999998643100 1
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCC---CCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKG---MEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
......|+.+|...|.+++.++.+. ++++..++||.+.++...... ........+..... . .+.
T Consensus 149 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~---------~p~ 218 (263)
T PRK08226 149 DPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAK-A---------IPL 218 (263)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhc-c---------CCC
Confidence 1234679999999999999988654 699999999999876311000 00001112222111 1 112
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
..+...+|+|+++..++... .+.++.+.++
T Consensus 219 ~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg 252 (263)
T PRK08226 219 RRLADPLEVGELAAFLASDESSYLTGTQNVIDGG 252 (263)
T ss_pred CCCCCHHHHHHHHHHHcCchhcCCcCceEeECCC
Confidence 23568899999998887543 3555666654
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.8e-16 Score=136.98 Aligned_cols=216 Identities=12% Similarity=0.058 Sum_probs=144.2
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
+|+++||||+|.||+++++.|+++|+.|++++|+....... ....+.++.+|+++.+.+.++++ ++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 37899999999999999999999999999999986532211 11246788999999887776553 689
Q ss_pred EEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 93 HVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 93 ~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
+|||+++...... ....+.+..+++|+.++.++++++.+ .+ ..++|++||...+.
T Consensus 81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~----------------- 143 (252)
T PRK07677 81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD----------------- 143 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc-----------------
Confidence 9999998532111 12223355788999999999888742 22 24899999874431
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh----hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD----FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
+......|+.+|...+.+.+.++.+ +++++..++||.+........ .. ........... . . ...
T Consensus 144 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~-~~-~~~~~~~~~~~-~--~-------~~~ 211 (252)
T PRK07677 144 AGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADK-LW-ESEEAAKRTIQ-S--V-------PLG 211 (252)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeeccccccccccc-cc-CCHHHHHHHhc-c--C-------CCC
Confidence 1122357999999999999887655 379999999999975321100 00 01112222211 1 1 112
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.+...+|++.++..++... .+..+.+.++.
T Consensus 212 ~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~ 245 (252)
T PRK07677 212 RLGTPEEIAGLAYFLLSDEAAYINGTCITMDGGQ 245 (252)
T ss_pred CCCCHHHHHHHHHHHcCccccccCCCEEEECCCe
Confidence 3668899999998887653 35556666553
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.8e-15 Score=135.66 Aligned_cols=213 Identities=17% Similarity=0.130 Sum_probs=144.5
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc-------C
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
+..++++|||||+|.||.++++.|.+.|++|++++|+....... ....+..+.+|++|.+.+.++++ +
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 34678999999999999999999999999999999976532211 01123455699999887776653 6
Q ss_pred CCEEEEcccccCCcccccC---CcceehhhhHHHHHHHHHHHHhC---CCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEASRIS---GVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~~---~~~~~~~~n~~~~~~ll~a~~~~---~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
+|+|||+||........+. +.+..+++|+.++..+++++... ...++|++||...+..
T Consensus 86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~---------------- 149 (296)
T PRK05872 86 IDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAA---------------- 149 (296)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCC----------------
Confidence 8999999997542222222 23456889999999988876431 2248999999766532
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
......|+.+|...+.+++.++.+ .++.+.++.|+.+..+...... .. ......... . ++ .....
T Consensus 150 -~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~--~~-~~~~~~~~~-~--~~-----~p~~~ 217 (296)
T PRK05872 150 -APGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDAD--AD-LPAFRELRA-R--LP-----WPLRR 217 (296)
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcc--cc-chhHHHHHh-h--CC-----CcccC
Confidence 123468999999999999888643 5799999999988765321100 00 011111111 0 00 11234
Q ss_pred ceeHHHHHHHHHhhhccCCCCc
Q 017290 242 FTFIDECVEGVLRLTKSDFREP 263 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~~~~~ 263 (374)
++..+|++++++.++.+....+
T Consensus 218 ~~~~~~va~~i~~~~~~~~~~i 239 (296)
T PRK05872 218 TTSVEKCAAAFVDGIERRARRV 239 (296)
T ss_pred CCCHHHHHHHHHHHHhcCCCEE
Confidence 6789999999999988765444
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.6e-15 Score=136.10 Aligned_cols=220 Identities=16% Similarity=0.063 Sum_probs=147.3
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
+.+.+++++||||+|.||+++++.|+++|++|++++|+...... ..+.++.+|+++.+.+..+++ ++|+|
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 81 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGL 81 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 34567899999999999999999999999999999988654322 246788999999888776654 68999
Q ss_pred EEcccccCCc------------ccccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCC
Q 017290 95 FNLAADMGGM------------GFIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 95 i~~a~~~~~~------------~~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
||+|+..... .....+.+..+.+|+.++..+++++.. .+..++|++||...+..
T Consensus 82 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------- 151 (266)
T PRK06171 82 VNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEG---------- 151 (266)
T ss_pred EECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCC----------
Confidence 9999964211 111223345688999999888887754 33348999999765421
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccC-CCCCCCCC------CC-cHHHHHHHHhccC
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYG-PFGTWKGM------EK-APAAFCRKALTST 227 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g-~~~~~~~~------~~-~~~~~~~~~~~~~ 227 (374)
......|+.+|...+.+++.++.+ .++++.+++||.+.. +....... .. ....+... +...
T Consensus 152 -------~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 223 (266)
T PRK06171 152 -------SEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAG-YTKT 223 (266)
T ss_pred -------CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhh-hccc
Confidence 123468999999999999988765 479999999998842 11100000 00 00011111 1100
Q ss_pred CceEeeCCCcccccceeHHHHHHHHHhhhccCC----CCcEEecCC
Q 017290 228 DKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF----REPVNIGSD 269 (374)
Q Consensus 228 ~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~----~~~~~i~~~ 269 (374)
...+...+...+|+|.++..++.... +.++++.++
T Consensus 224 -------~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg 262 (266)
T PRK06171 224 -------STIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG 262 (266)
T ss_pred -------ccccCCCCCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence 01112346778999999999887542 455666544
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.3e-15 Score=125.23 Aligned_cols=205 Identities=15% Similarity=0.020 Sum_probs=145.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc----ccceeEEecccchhhHhhhc-------cCCCE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM----FCHEFHLVDLRVMDNCLKVT-------KGVDH 93 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~i~~~~~dl~~~~~~~~~~-------~~~d~ 93 (374)
..|.++||||++-||.+++++|.+.|++|+...|+.++...... ..+.++..|++|.+.+..++ .++|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 44789999999999999999999999999999999876443311 23678889999998755544 37999
Q ss_pred EEEcccccCCcccccC---CcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 94 VFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 94 vi~~a~~~~~~~~~~~---~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
+||+||........+. +++..+++|+.|..+...++ .+.+..++|++||.+.-- +.
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~-----------------~y 147 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRY-----------------PY 147 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccc-----------------cC
Confidence 9999998765333333 45567999999988887765 344444999999965311 22
Q ss_pred CCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 167 EPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
...+.|+.+|..+..+.+.+..+. +++++.+-||.+-........... -........ .....+
T Consensus 148 ~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g-~~~~~~~~y-------------~~~~~l 213 (246)
T COG4221 148 PGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEG-DDERADKVY-------------KGGTAL 213 (246)
T ss_pred CCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCc-hhhhHHHHh-------------ccCCCC
Confidence 345789999999999988887664 699999999988443110000000 001111111 122468
Q ss_pred eHHHHHHHHHhhhccCC
Q 017290 244 FIDECVEGVLRLTKSDF 260 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~~ 260 (374)
..+|+|++++.++.+|.
T Consensus 214 ~p~dIA~~V~~~~~~P~ 230 (246)
T COG4221 214 TPEDIAEAVLFAATQPQ 230 (246)
T ss_pred CHHHHHHHHHHHHhCCC
Confidence 89999999999999875
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.8e-15 Score=132.95 Aligned_cols=201 Identities=17% Similarity=0.086 Sum_probs=138.5
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------------ccccceeEEecccchhhHhhhcc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------------DMFCHEFHLVDLRVMDNCLKVTK 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------~~~~i~~~~~dl~~~~~~~~~~~ 89 (374)
++.+++++||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|+++.+.+.++++
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 82 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA 82 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence 34568999999999999999999999999999999876431110 01235678899999988877664
Q ss_pred -------CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccc
Q 017290 90 -------GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETN 155 (374)
Q Consensus 90 -------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~ 155 (374)
++|+|||+|+........+ .+.+..+++|+.++..+++++.. .+-.++|++||......
T Consensus 83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~------- 155 (273)
T PRK08278 83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP------- 155 (273)
T ss_pred HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc-------
Confidence 6899999999643211211 22355678999999999988753 22347888887532110
Q ss_pred cCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEe
Q 017290 156 VSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEM 232 (374)
Q Consensus 156 ~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (374)
. ...+...|+.+|...|.+++.++.+. ++.+..+.|+.+... ........ +
T Consensus 156 -----~---~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t------------~~~~~~~~-~----- 209 (273)
T PRK08278 156 -----K---WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIAT------------AAVRNLLG-G----- 209 (273)
T ss_pred -----c---ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCcccc------------HHHHhccc-c-----
Confidence 0 11345789999999999999998764 689999999843321 01111110 1
Q ss_pred eCCCcccccceeHHHHHHHHHhhhccC
Q 017290 233 WGDGLQTRSFTFIDECVEGVLRLTKSD 259 (374)
Q Consensus 233 ~~~~~~~~~~i~~~Dva~~i~~~~~~~ 259 (374)
......+...+|+|.+++.++...
T Consensus 210 ---~~~~~~~~~p~~va~~~~~l~~~~ 233 (273)
T PRK08278 210 ---DEAMRRSRTPEIMADAAYEILSRP 233 (273)
T ss_pred ---cccccccCCHHHHHHHHHHHhcCc
Confidence 011224568899999999988764
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=2e-15 Score=133.05 Aligned_cols=200 Identities=13% Similarity=0.100 Sum_probs=135.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc-------CC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
.++++||||||+|+||+++++.|++.|++|++++|++...... ...++.++.+|+.+.+.+..+++ ++
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 3568999999999999999999999999999999987533211 01146788999999888776553 46
Q ss_pred CEEEEcccccCCcccc-cCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFI-QSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~-~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
|.+||+++........ ....+..++.|+.+...+++.+... ...++|++||...... +..+
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----------------~~~~ 146 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK----------------ASPD 146 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc----------------CCCC
Confidence 9999999854211110 1122344677887777777665442 1237999998643110 1123
Q ss_pred CCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeH
Q 017290 169 QDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
...|+.+|...+.+++.+..+. +++++++||+.++++... . ..+ .. . .. . ...++..
T Consensus 147 ~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~------~-~~~-~~-~------~~--~---~~~~~~~ 206 (238)
T PRK05786 147 QLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEP------E-RNW-KK-L------RK--L---GDDMAPP 206 (238)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCc------h-hhh-hh-h------cc--c---cCCCCCH
Confidence 4579999999999888887653 899999999999986321 0 000 00 0 00 0 1135677
Q ss_pred HHHHHHHHhhhccC
Q 017290 246 DECVEGVLRLTKSD 259 (374)
Q Consensus 246 ~Dva~~i~~~~~~~ 259 (374)
+|++++++.++..+
T Consensus 207 ~~va~~~~~~~~~~ 220 (238)
T PRK05786 207 EDFAKVIIWLLTDE 220 (238)
T ss_pred HHHHHHHHHHhccc
Confidence 99999999988653
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.5e-15 Score=133.79 Aligned_cols=216 Identities=15% Similarity=0.079 Sum_probs=141.0
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CCCE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
++++||||+|.||.++++.|++.|++|+++.|+....... ....+.++.+|+++.+.+.++++ .+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4799999999999999999999999999999875432111 11246788899999888777653 5799
Q ss_pred EEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHH----hCC-CCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 94 VFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASR----ISG-VKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 94 vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~----~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
|||+++......... .+.+..+.+|+.++..+++++. +.+ ..++|++||..... +
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------------~ 143 (254)
T TIGR02415 81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHE-----------------G 143 (254)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcC-----------------C
Confidence 999998643211112 2234568889988877666553 333 25899999864421 1
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEe------eCCC
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEM------WGDG 236 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 236 (374)
....+.|+.+|...+.+++.+..+. ++.+.+++|+.+..+... .+...... .....+ +...
T Consensus 144 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~---------~~~~~~~~-~~~~~~~~~~~~~~~~ 213 (254)
T TIGR02415 144 NPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWE---------EIDEETSE-IAGKPIGEGFEEFSSE 213 (254)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhh---------hhhhhhhh-cccCchHHHHHHHHhh
Confidence 1234689999999999998877653 699999999988654211 00000000 000000 0000
Q ss_pred cccccceeHHHHHHHHHhhhccCC----CCcEEecCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSDF----REPVNIGSD 269 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~~----~~~~~i~~~ 269 (374)
...-.+...+|+++++..++.... +..+.+.++
T Consensus 214 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 250 (254)
T TIGR02415 214 IALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDGG 250 (254)
T ss_pred CCCCCCCCHHHHHHHHHhhcccccCCccCcEEEecCC
Confidence 112246788999999999998753 444444443
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.9e-15 Score=138.41 Aligned_cols=177 Identities=15% Similarity=0.032 Sum_probs=122.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhcc-------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
.+++|+||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|+.+.+.+..+++
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 568999999999999999999999999999999975432110 01246788999999888776653
Q ss_pred CCCEEEEcccccCCc-ccccCCcceehhhhHHH----HHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 90 GVDHVFNLAADMGGM-GFIQSNHSVIMYNNTMI----SFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~-~~~~~~~~~~~~~n~~~----~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
++|+|||+|+..... .......+..+.+|+.+ +..++..+++.+..++|++||...+..... +.+ ....+.
T Consensus 95 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~-~~~-~~~~~~-- 170 (306)
T PRK06197 95 RIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAI-HFD-DLQWER-- 170 (306)
T ss_pred CCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCC-Ccc-ccCccc--
Confidence 589999999965321 12223446678899988 555666666666669999999764431110 000 111111
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhh---CCcEE--EEeeCcccCC
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDF---GIECR--VGRFHNIYGP 205 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~--ilR~~~v~g~ 205 (374)
+..+...|+.+|...+.+.+.++.+. ++++. .+.||.+..+
T Consensus 171 ~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~ 216 (306)
T PRK06197 171 RYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTE 216 (306)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCc
Confidence 23456789999999999999887654 45544 4478888655
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.3e-15 Score=134.44 Aligned_cols=220 Identities=19% Similarity=0.089 Sum_probs=143.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
.++++|||||+|.||+++++.|+++|++|++++|+ ...... ...++.++.+|+++.+.+..+++ ++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 56899999999999999999999999999999998 321111 11246788999999887766654 58
Q ss_pred CEEEEcccccCCc-cccc---CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 92 DHVFNLAADMGGM-GFIQ---SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 92 d~vi~~a~~~~~~-~~~~---~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
|++||+|+..... ...+ ...+..+.+|+.+...+++++ ++.+ .++|++||...+..
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~--------------- 147 (272)
T PRK08589 84 DVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAA--------------- 147 (272)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCC---------------
Confidence 9999999975311 1111 223445678888876666554 3344 58999999765421
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
......|+.+|...+.+++.++.+. ++++..+.||.+..+...... ......+...... ... ......
T Consensus 148 --~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~-~~~-----~~~~~~ 218 (272)
T PRK08589 148 --DLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLT-GTSEDEAGKTFRE-NQK-----WMTPLG 218 (272)
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhc-ccchhhHHHHHhh-hhh-----ccCCCC
Confidence 1234679999999999999987653 699999999998765321000 0000000000000 000 001122
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.+...+|++++++.++... .+..+.+.++.
T Consensus 219 ~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~ 252 (272)
T PRK08589 219 RLGKPEEVAKLVVFLASDDSSFITGETIRIDGGV 252 (272)
T ss_pred CCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCc
Confidence 3578899999999988653 25566666543
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.3e-15 Score=131.12 Aligned_cols=194 Identities=14% Similarity=0.090 Sum_probs=132.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccch--hhHhhh-------c
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVM--DNCLKV-------T 88 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~--~~~~~~-------~ 88 (374)
.+++++||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|+.+. +.+.++ +
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 458999999999999999999999999999999987532211 011345677888642 233332 2
Q ss_pred -cCCCEEEEcccccCCc-ccccC---CcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCC
Q 017290 89 -KGVDHVFNLAADMGGM-GFIQS---NHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 89 -~~~d~vi~~a~~~~~~-~~~~~---~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
..+|+|||+|+..... ...+. +....+++|+.++..+++++. +.+..++|++||.....
T Consensus 85 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~------------ 152 (239)
T PRK08703 85 QGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET------------ 152 (239)
T ss_pred CCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc------------
Confidence 3689999999964321 11221 233457889999888877764 34445899999854321
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhhh----CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKDF----GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
+......|+.+|...+.+++.++.+. ++++.+++||.++++.... ... +.
T Consensus 153 -----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~-------------~~~--------~~ 206 (239)
T PRK08703 153 -----PKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIK-------------SHP--------GE 206 (239)
T ss_pred -----CCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccc-------------cCC--------CC
Confidence 22234679999999999999988764 5899999999999874210 000 00
Q ss_pred CcccccceeHHHHHHHHHhhhcc
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKS 258 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~ 258 (374)
....+...+|++..+..++..
T Consensus 207 --~~~~~~~~~~~~~~~~~~~~~ 227 (239)
T PRK08703 207 --AKSERKSYGDVLPAFVWWASA 227 (239)
T ss_pred --CccccCCHHHHHHHHHHHhCc
Confidence 011245889999999988874
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.6e-15 Score=135.78 Aligned_cols=219 Identities=10% Similarity=-0.012 Sum_probs=145.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhcc-------CCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
+++++++||||+|.||+++++.|+++|++|++++|++....... ...+.++.+|+.+.+.+..+++ ++|+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 35689999999999999999999999999999999865322111 1236788999999887766653 6899
Q ss_pred EEEcccccCCc-ccccCC-------cceehhhhHHHHHHHHHHHHhC---CCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 94 VFNLAADMGGM-GFIQSN-------HSVIMYNNTMISFNMLEASRIS---GVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 94 vi~~a~~~~~~-~~~~~~-------~~~~~~~n~~~~~~ll~a~~~~---~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
+||+|+..... ...+.+ .+..+++|+.++..+++++... ...++|++||...+..
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------------- 149 (263)
T PRK06200 84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYP-------------- 149 (263)
T ss_pred EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCC--------------
Confidence 99999964311 111111 3345778998888887776532 1247999999766431
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh--CCcEEEEeeCcccCCCCCCCC---CCC---cHHHHHHHHhccCCceEeeC
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF--GIECRVGRFHNIYGPFGTWKG---MEK---APAAFCRKALTSTDKFEMWG 234 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~ 234 (374)
......|+.+|...+.+++.++.+. ++.+..+.||.+..+...... ... ..... .....
T Consensus 150 ---~~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~-~~~~~--------- 216 (263)
T PRK06200 150 ---GGGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGL-ADMIA--------- 216 (263)
T ss_pred ---CCCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccch-hHHhh---------
Confidence 2234579999999999999988764 388999999998655311000 000 00000 11111
Q ss_pred CCcccccceeHHHHHHHHHhhhccC-----CCCcEEecCC
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSD-----FREPVNIGSD 269 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~-----~~~~~~i~~~ 269 (374)
...+...+...+|++++++.++... .+..+.+.++
T Consensus 217 ~~~p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG 256 (263)
T PRK06200 217 AITPLQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGG 256 (263)
T ss_pred cCCCCCCCCCHHHHhhhhhheecccccCcccceEEEEcCc
Confidence 1112235678899999999988654 2455666554
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.9e-15 Score=131.78 Aligned_cols=165 Identities=13% Similarity=0.081 Sum_probs=122.6
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhc---c--CCCEEEEcccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT---K--GVDHVFNLAAD 100 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~---~--~~d~vi~~a~~ 100 (374)
|++++||||+|.||++++++|++.|++|++++|+..........+++++.+|+++.+.+..++ . ++|+|||+++.
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 578999999999999999999999999999999865433222234678899999998887754 2 58999999997
Q ss_pred cCCc-----ccccCCcceehhhhHHHHHHHHHHHHh---CCCCeEEEeeccc-ccCCCcccccccCCCCCCCCCCCCCCc
Q 017290 101 MGGM-----GFIQSNHSVIMYNNTMISFNMLEASRI---SGVKRFFYASSAC-IYPEFKQLETNVSLKESDAWPAEPQDA 171 (374)
Q Consensus 101 ~~~~-----~~~~~~~~~~~~~n~~~~~~ll~a~~~---~~~~~~i~~Ss~~-vy~~~~~~~~~~~~~e~~~~~~~~~~~ 171 (374)
.... .....+.+..++.|+.++..+++++.. ....++|++||.. .++.. +..+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------~~~~~~~ 145 (222)
T PRK06953 81 YGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA---------------TGTTGWL 145 (222)
T ss_pred ccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc---------------cCCCccc
Confidence 5311 112233466788999999999988764 1223789998854 33321 1112246
Q ss_pred hHHhHHHHHHHHHHHHhhh-CCcEEEEeeCcccCC
Q 017290 172 YGLEKLASEELCKHYTKDF-GIECRVGRFHNIYGP 205 (374)
Q Consensus 172 y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~v~g~ 205 (374)
|+.+|...+.+++.++.+. +++++.++|+.+..+
T Consensus 146 Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~ 180 (222)
T PRK06953 146 YRASKAALNDALRAASLQARHATCIALHPGWVRTD 180 (222)
T ss_pred cHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecC
Confidence 9999999999999887654 688999999988754
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.9e-15 Score=151.56 Aligned_cols=229 Identities=18% Similarity=0.166 Sum_probs=145.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhcc-------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
.++++|||||+|+||+++++.|++.|++|++++|+....... ....+..+.+|+++.+.+..+++
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 568999999999999999999999999999999986432111 11134678899999998877765
Q ss_pred CCCEEEEcccccCCcccccC---CcceehhhhHHHHHHHHHH----HHhCC-CCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEA----SRISG-VKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~~---~~~~~~~~n~~~~~~ll~a----~~~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|+|||+|+........+. +....+++|+.+...+... +++.+ ..++|++||...+.
T Consensus 493 ~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~-------------- 558 (676)
T TIGR02632 493 GVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY-------------- 558 (676)
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcC--------------
Confidence 68999999996532112121 2334566777776665543 33443 24899999965432
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
+......|+.+|...+.+++.++.+ .++++..++|+.++-...-+.. ...........+........+.....
T Consensus 559 ---~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~ 634 (676)
T TIGR02632 559 ---AGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDG-EWREERAAAYGIPADELEEHYAKRTL 634 (676)
T ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccc-cchhhhhhcccCChHHHHHHHHhcCC
Confidence 1123468999999999999998775 3699999999988722111000 00000000000000000000111223
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
...+++.+|+|+++..++... .+.++++.++..
T Consensus 635 l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~ 671 (676)
T TIGR02632 635 LKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVP 671 (676)
T ss_pred cCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence 345789999999999887643 267788876643
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.2e-15 Score=133.70 Aligned_cols=216 Identities=13% Similarity=0.002 Sum_probs=138.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-----c---ccccceeEEecccchhhHhhhcc------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-----E---DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~---~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
++++++|||||++.||+++++.|++.|++|+++.|+...... . ....+.++.+|+++.+.+.++++
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 356899999999999999999999999999888764332110 0 11246788999999887776654
Q ss_pred -CCCEEEEcccccCCc------cccc---CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccc
Q 017290 90 -GVDHVFNLAADMGGM------GFIQ---SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETN 155 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~------~~~~---~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~ 155 (374)
++|++||+|+..+.. .+.+ .+....+.+|+.+...+..++ ++.+..++|++||...+.
T Consensus 86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------- 157 (260)
T PRK08416 86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV-------- 157 (260)
T ss_pred CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc--------
Confidence 589999999854210 1111 122335666776655554443 333445899999964321
Q ss_pred cCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEe
Q 017290 156 VSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEM 232 (374)
Q Consensus 156 ~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (374)
+......|+.+|...+.+++.++.+. ++++..+.||.+-.+.... .. ........... .
T Consensus 158 ---------~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~--~~-~~~~~~~~~~~-~----- 219 (260)
T PRK08416 158 ---------YIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKA--FT-NYEEVKAKTEE-L----- 219 (260)
T ss_pred ---------CCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhh--cc-CCHHHHHHHHh-c-----
Confidence 11223579999999999999988764 7999999999885442100 00 00111111110 0
Q ss_pred eCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 233 WGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 233 ~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
.+...+...+|+|.+++.++... .+..+.+.++
T Consensus 220 ----~~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg 256 (260)
T PRK08416 220 ----SPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGG 256 (260)
T ss_pred ----CCCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence 01224678999999999988654 2555666554
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.9e-15 Score=136.58 Aligned_cols=177 Identities=16% Similarity=0.101 Sum_probs=126.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhcc------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+.+++++||||+|.||.++++.|+++|++|+++.|+..+.... ....+.++.+|+.+.+++..+++
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~ 91 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG 91 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 4678999999999999999999999999999999986532111 11246788999999888876653
Q ss_pred -CCCEEEEcccccCCc--ccccCCcceehhhhHHHHHHHHHHHHh---CCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 90 -GVDHVFNLAADMGGM--GFIQSNHSVIMYNNTMISFNMLEASRI---SGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~ll~a~~~---~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
++|++||+||..... ....+..+..+.+|+.++..+...+.. .+..++|++||...+...... ..+.++.
T Consensus 92 ~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~---~~~~~~~- 167 (313)
T PRK05854 92 RPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINW---DDLNWER- 167 (313)
T ss_pred CCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCc---ccccccc-
Confidence 589999999975421 123344566788999987777665542 223489999997554321110 0122222
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh-----hCCcEEEEeeCcccCC
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD-----FGIECRVGRFHNIYGP 205 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~g~ 205 (374)
+..+...|+.+|...+.+.+.++.+ .++.+..+.||.+..+
T Consensus 168 -~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 168 -SYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred -cCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence 3345678999999999999988753 3689999999988654
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.3e-14 Score=128.23 Aligned_cols=216 Identities=13% Similarity=0.012 Sum_probs=141.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
..+++++||||+|.||.++++.|++.|+.|+++.|+....... ....+.++.+|+++.+.+.++++
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4568999999999999999999999999999888854321110 11235678899999888776653
Q ss_pred CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHH----HHHHhCCC-CeEEEeecccccCCCcccccccCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNML----EASRISGV-KRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll----~a~~~~~~-~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|++||+|+........+ ...+..+++|+.++..++ ..+.+.+. .++|++||...+.
T Consensus 85 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~-------------- 150 (261)
T PRK08936 85 TLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI-------------- 150 (261)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC--------------
Confidence 5899999999643211222 223445778877765544 44455543 4899999964321
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
+..+...|+.+|...+.+.+.++.+ .++++++++|+.+..+..... .. . ...... ..... .
T Consensus 151 ---~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~-~~-~-~~~~~~-~~~~~---------~ 214 (261)
T PRK08936 151 ---PWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEK-FA-D-PKQRAD-VESMI---------P 214 (261)
T ss_pred ---CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccc-cC-C-HHHHHH-HHhcC---------C
Confidence 2234568999998888888887654 379999999999987642110 00 0 111111 11111 1
Q ss_pred cccceeHHHHHHHHHhhhccCC----CCcEEecCC
Q 017290 239 TRSFTFIDECVEGVLRLTKSDF----REPVNIGSD 269 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~~----~~~~~i~~~ 269 (374)
...+...+|+++.+..++.... +..+.+.++
T Consensus 215 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g 249 (261)
T PRK08936 215 MGYIGKPEEIAAVAAWLASSEASYVTGITLFADGG 249 (261)
T ss_pred CCCCcCHHHHHHHHHHHcCcccCCccCcEEEECCC
Confidence 1246678999999999887542 344555544
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.7e-14 Score=129.35 Aligned_cols=221 Identities=13% Similarity=0.019 Sum_probs=142.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------c--cccceeEEecccchhhHhhhcc------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------D--MFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~--~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
.+.++++||||+|.||+++++.|+++|++|++++|+..+.... . ...+.++.+|++|.+.+.++++
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 3568999999999999999999999999999999986532211 0 1245678899999888766543
Q ss_pred -CCCEEEEcccccCCcccccC---CcceehhhhHHHHHHHHHH----HHhCCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 -GVDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEA----SRISGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~~~~---~~~~~~~~n~~~~~~ll~a----~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|++||+|+........+. +....+++|+.+...++++ +++.+..++|++||...+..
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------- 152 (265)
T PRK07062 86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQP------------- 152 (265)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCC-------------
Confidence 68999999996432112222 2344566777666555544 34444559999999765421
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCC-----CCCcHHHHHHHHhccCCceEee
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKG-----MEKAPAAFCRKALTSTDKFEMW 233 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 233 (374)
......|+.+|...+.+++.++.+ .++++..++||.+..+.-.... .......+...... .
T Consensus 153 ----~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~------ 221 (265)
T PRK07062 153 ----EPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALAR-K------ 221 (265)
T ss_pred ----CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhh-c------
Confidence 122357999999998888877655 4799999999988765211000 00000011111100 0
Q ss_pred CCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 234 GDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 234 ~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
...+...+...+|+|++++.++... .+.++.+.++
T Consensus 222 -~~~p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg 260 (265)
T PRK07062 222 -KGIPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGG 260 (265)
T ss_pred -CCCCcCCCCCHHHHHHHHHHHhCchhcccccceEEEcCc
Confidence 0111224678899999999988653 3566666654
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.1e-15 Score=129.99 Aligned_cols=166 Identities=12% Similarity=0.069 Sum_probs=119.4
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-ccccceeEEecccchhhHhhhcc-----CCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-DMFCHEFHLVDLRVMDNCLKVTK-----GVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~i~~~~~dl~~~~~~~~~~~-----~~d~vi~~a~ 99 (374)
|++++||||+|+||+++++.|++.|++|++++|++...... ...++.++.+|+.|.+.+.++++ ++|+|||+++
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 47899999999999999999999999999999987643221 11246778899999887776664 5899999998
Q ss_pred ccCCcc-----cccCCcceehhhhHHHHHHHHHHHHhC---CCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCc
Q 017290 100 DMGGMG-----FIQSNHSVIMYNNTMISFNMLEASRIS---GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA 171 (374)
Q Consensus 100 ~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~a~~~~---~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~ 171 (374)
...... ....+....+..|+.++..+++++... +..+++++||.. +... .. +......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~--g~~~-------~~-----~~~~~~~ 146 (225)
T PRK08177 81 ISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQL--GSVE-------LP-----DGGEMPL 146 (225)
T ss_pred ccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCc--cccc-------cC-----CCCCccc
Confidence 753211 112233456778888888888776532 224788888753 2111 00 1223457
Q ss_pred hHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCC
Q 017290 172 YGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGP 205 (374)
Q Consensus 172 y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~ 205 (374)
|+.+|...+.+++.++.+ .++.+..++||.+-.+
T Consensus 147 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 147 YKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred hHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence 999999999999998765 3588999999988654
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.9e-15 Score=130.41 Aligned_cols=220 Identities=13% Similarity=0.050 Sum_probs=139.6
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
|++|||||+|.||+++++.|+++|++|++++|++...... ....+.++.+|+++.+.+.++++ ++|++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 6899999999999999999999999999999986432111 01246788999999888776653 68999
Q ss_pred EEcccccCCc--ccccCCc---ceehhhhHHHHHHHHH----HHH-hCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 95 FNLAADMGGM--GFIQSNH---SVIMYNNTMISFNMLE----ASR-ISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 95 i~~a~~~~~~--~~~~~~~---~~~~~~n~~~~~~ll~----a~~-~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
||+|+..... ...+.+. ...+.+|+.+...+.. .+. +.+..++|++||...+.
T Consensus 81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~----------------- 143 (259)
T PRK08340 81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE----------------- 143 (259)
T ss_pred EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC-----------------
Confidence 9999964210 1112122 2234556655444433 222 23345899999976532
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCC-----C-CCcHHHHHHHHhccCCceEeeCC
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKG-----M-EKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
+..+...|+.+|...+.+++.++.+. ++.+..+.||.+-.+...... . ...........+. .
T Consensus 144 ~~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 214 (259)
T PRK08340 144 PMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVL---------E 214 (259)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHh---------c
Confidence 22234689999999999999988764 588889999987655311000 0 0000000000010 0
Q ss_pred CcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
..+...+...+|+|+++..++..+ .+.+..+.++...
T Consensus 215 ~~p~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~~~ 255 (259)
T PRK08340 215 RTPLKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAMTR 255 (259)
T ss_pred cCCccCCCCHHHHHHHHHHHcCcccccccCceEeecCCcCC
Confidence 011234678899999999988754 2556666665443
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-14 Score=124.21 Aligned_cols=187 Identities=16% Similarity=0.087 Sum_probs=133.8
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc---CCCEEEEcccccCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK---GVDHVFNLAADMGG 103 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~---~~d~vi~~a~~~~~ 103 (374)
|+++||||+|.||.++++.|.++ ++|++++|++. .+.+|+.+.+.+.++++ ++|++||+++....
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~ 68 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVHF 68 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 58999999999999999999999 99999998743 35789999888887765 78999999996432
Q ss_pred cc---cccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHH
Q 017290 104 MG---FIQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA 178 (374)
Q Consensus 104 ~~---~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~ 178 (374)
.. ....+....+++|+.++.++++++... +..+++++||..... +......|+.+|..
T Consensus 69 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~-----------------~~~~~~~Y~~sK~a 131 (199)
T PRK07578 69 APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE-----------------PIPGGASAATVNGA 131 (199)
T ss_pred CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC-----------------CCCCchHHHHHHHH
Confidence 11 112234455778999999998877542 223799998864321 22234689999999
Q ss_pred HHHHHHHHHhh--hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhh
Q 017290 179 SEELCKHYTKD--FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 256 (374)
Q Consensus 179 ~E~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~ 256 (374)
.+.+.+.++.+ .++.+..++||.+-.+.. .. ... + . ...++..+|+|+++..++
T Consensus 132 ~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~----------~~-------~~~--~--~---~~~~~~~~~~a~~~~~~~ 187 (199)
T PRK07578 132 LEGFVKAAALELPRGIRINVVSPTVLTESLE----------KY-------GPF--F--P---GFEPVPAARVALAYVRSV 187 (199)
T ss_pred HHHHHHHHHHHccCCeEEEEEcCCcccCchh----------hh-------hhc--C--C---CCCCCCHHHHHHHHHHHh
Confidence 99999988775 478999999987743210 00 000 1 0 123578999999999998
Q ss_pred ccC-CCCcEEe
Q 017290 257 KSD-FREPVNI 266 (374)
Q Consensus 257 ~~~-~~~~~~i 266 (374)
++. .++++++
T Consensus 188 ~~~~~g~~~~~ 198 (199)
T PRK07578 188 EGAQTGEVYKV 198 (199)
T ss_pred ccceeeEEecc
Confidence 765 3455544
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.1e-15 Score=132.02 Aligned_cols=220 Identities=13% Similarity=0.037 Sum_probs=143.4
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhcc-------CCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
.++++++||||+|.||+++++.|++.|++|++++|+........ ...+.++.+|+.+.+.+.++++ ++|+
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 82 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC 82 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 45689999999999999999999999999999998764322111 1235678899999877666553 6899
Q ss_pred EEEcccccCCc-cc---cc----CCcceehhhhHHHHHHHHHHHHhC---CCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 94 VFNLAADMGGM-GF---IQ----SNHSVIMYNNTMISFNMLEASRIS---GVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 94 vi~~a~~~~~~-~~---~~----~~~~~~~~~n~~~~~~ll~a~~~~---~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
+||+|+..... .. .. .+.+..+++|+.++..+++++... ...++|++||...+.
T Consensus 83 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~--------------- 147 (262)
T TIGR03325 83 LIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFY--------------- 147 (262)
T ss_pred EEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceec---------------
Confidence 99999864210 01 11 123467889999999998887542 113788888865431
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhhC--CcEEEEeeCcccCCCCCCCCC--C-CcHHH-HHHHHhccCCceEeeCCC
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDFG--IECRVGRFHNIYGPFGTWKGM--E-KAPAA-FCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~g~~~~~~~~--~-~~~~~-~~~~~~~~~~~~~~~~~~ 236 (374)
+......|+.+|...+.+++.++.+.+ +++..+.||.+..+....... . ..... -....... .
T Consensus 148 --~~~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 216 (262)
T TIGR03325 148 --PNGGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKS---------V 216 (262)
T ss_pred --CCCCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhh---------c
Confidence 112345799999999999999987753 788899999987653210000 0 00000 00111110 0
Q ss_pred cccccceeHHHHHHHHHhhhccC-----CCCcEEecCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD-----FREPVNIGSD 269 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~-----~~~~~~i~~~ 269 (374)
.+...+...+|+|++++.++... .+.++.+.++
T Consensus 217 ~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg 254 (262)
T TIGR03325 217 LPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGG 254 (262)
T ss_pred CCCCCCCChHHhhhheeeeecCCCcccccceEEEecCC
Confidence 11234677899999998887642 2445555544
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.4e-14 Score=128.10 Aligned_cols=213 Identities=17% Similarity=0.100 Sum_probs=144.1
Q ss_pred CCCeEEEEcCcc-hhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhcc------
Q 017290 25 EKLRISVTGAGG-FIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 25 ~~~~ilItGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
.+++++||||+| -||+++++.|+++|++|++++|+..+.... ....+.++.+|+.+.+.+..+++
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 95 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL 95 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 568999999998 599999999999999999999876432211 01246778899999887776653
Q ss_pred -CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccccCCCcccccccCCCC
Q 017290 90 -GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|+|||+++........+ .+....+++|+.+...+++++.. .+ ..++|++||...+.
T Consensus 96 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~------------- 162 (262)
T PRK07831 96 GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR------------- 162 (262)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC-------------
Confidence 6899999999643211111 23344577899888887776543 32 34788888854321
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+..+...|+.+|...+.+++.++.+ .++++.+++|+.+..+.... .......... ....
T Consensus 163 ----~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~----~~~~~~~~~~-~~~~--------- 224 (262)
T PRK07831 163 ----AQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAK----VTSAELLDEL-AARE--------- 224 (262)
T ss_pred ----CCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccc----ccCHHHHHHH-HhcC---------
Confidence 1224468999999999999999865 57999999999998764210 0111222221 1111
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGS 268 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~ 268 (374)
....+...+|+|++++.++... .+..+.+..
T Consensus 225 ~~~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~ 259 (262)
T PRK07831 225 AFGRAAEPWEVANVIAFLASDYSSYLTGEVVSVSS 259 (262)
T ss_pred CCCCCcCHHHHHHHHHHHcCchhcCcCCceEEeCC
Confidence 1224667899999999988764 245555544
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-14 Score=129.74 Aligned_cols=213 Identities=15% Similarity=0.083 Sum_probs=137.6
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-c----c---ccccceeEEecccchhhH----hhhc------
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-T----E---DMFCHEFHLVDLRVMDNC----LKVT------ 88 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~----~---~~~~i~~~~~dl~~~~~~----~~~~------ 88 (374)
+.++||||+|+||+++++.|+++|++|+++.|+..... . . ....+.++.+|++|.+.+ .+++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 57999999999999999999999999999876532111 0 0 011345688999997644 2222
Q ss_pred -cCCCEEEEcccccCCcccccCC--------------cceehhhhHHHHHHHHHHHHhCC----------CCeEEEeecc
Q 017290 89 -KGVDHVFNLAADMGGMGFIQSN--------------HSVIMYNNTMISFNMLEASRISG----------VKRFFYASSA 143 (374)
Q Consensus 89 -~~~d~vi~~a~~~~~~~~~~~~--------------~~~~~~~n~~~~~~ll~a~~~~~----------~~~~i~~Ss~ 143 (374)
.++|+|||+||..........+ ....+++|+.+...+++++.... ..++|++||.
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~ 161 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA 161 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence 3699999999964321111111 23457889988888887654221 1257777775
Q ss_pred cccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHH
Q 017290 144 CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFC 220 (374)
Q Consensus 144 ~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~ 220 (374)
.... +..+...|+.+|...+.+++.++.+ .++++++++||.+..+... .....
T Consensus 162 ~~~~-----------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~-------~~~~~ 217 (267)
T TIGR02685 162 MTDQ-----------------PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM-------PFEVQ 217 (267)
T ss_pred hccC-----------------CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc-------chhHH
Confidence 3321 2234568999999999999998766 5799999999998655321 11111
Q ss_pred HHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 221 RKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
.. .... .++ + ..+...+|++.+++.++... .+..+.+.++..+
T Consensus 218 ~~-~~~~--~~~-~-----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~ 264 (267)
T TIGR02685 218 ED-YRRK--VPL-G-----QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL 264 (267)
T ss_pred HH-HHHh--CCC-C-----cCCCCHHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence 11 1111 111 0 13468899999999988754 2566677665443
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2e-14 Score=131.57 Aligned_cols=162 Identities=15% Similarity=0.066 Sum_probs=118.3
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc-----
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
...++++++||||+|.||++++++|+++|++|++.++........ ....+.++.+|+.+.+.+.++++
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~ 87 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL 87 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 445679999999999999999999999999999998764321110 11245688999999887776654
Q ss_pred -CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHHh----C----C---CCeEEEeecccccCCCccccc
Q 017290 90 -GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRI----S----G---VKRFFYASSACIYPEFKQLET 154 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~----~----~---~~~~i~~Ss~~vy~~~~~~~~ 154 (374)
++|++||+|+...... ....+....+++|+.++..+++++.. . + ..++|++||...+..
T Consensus 88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------ 161 (306)
T PRK07792 88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVG------ 161 (306)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccC------
Confidence 6899999999754221 12233455688999999998887642 1 1 138999998654321
Q ss_pred ccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeC
Q 017290 155 NVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFH 200 (374)
Q Consensus 155 ~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~ 200 (374)
......|+.+|...+.+++.++.+ .++.+..+.|+
T Consensus 162 -----------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg 199 (306)
T PRK07792 162 -----------PVGQANYGAAKAGITALTLSAARALGRYGVRANAICPR 199 (306)
T ss_pred -----------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC
Confidence 123457999999999999888764 57888888886
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.2e-15 Score=146.17 Aligned_cols=216 Identities=14% Similarity=0.032 Sum_probs=148.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
.++++|||||+|.||.++++.|+++|++|++++|+........ ...+..+.+|++|.+.+..+++ .+|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5689999999999999999999999999999999764322111 1234568899999888877664 58999
Q ss_pred EEcccccCCc----ccccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 95 FNLAADMGGM----GFIQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 95 i~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
||+|+..... +....+.+..+++|+.++..+++++... +..++|++||...+. +...
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------------~~~~ 410 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLL-----------------ALPP 410 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcC-----------------CCCC
Confidence 9999965211 1122234567889999999998877553 234899999976542 2224
Q ss_pred CCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeH
Q 017290 169 QDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
...|+.+|...+.+++.++.+. ++++.+++||.+..+...... .. ........ .... ....+...
T Consensus 411 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-~~-~~~~~~~~-~~~~---------~~~~~~~~ 478 (520)
T PRK06484 411 RNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALK-AS-GRADFDSI-RRRI---------PLGRLGDP 478 (520)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhc-cc-cHHHHHHH-HhcC---------CCCCCcCH
Confidence 4689999999999999987653 699999999999876321000 00 00011111 1100 11235688
Q ss_pred HHHHHHHHhhhccC----CCCcEEecCC
Q 017290 246 DECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 246 ~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
+|+|++++.++... .+..+.+.++
T Consensus 479 ~dia~~~~~l~s~~~~~~~G~~i~vdgg 506 (520)
T PRK06484 479 EEVAEAIAFLASPAASYVNGATLTVDGG 506 (520)
T ss_pred HHHHHHHHHHhCccccCccCcEEEECCC
Confidence 99999999988753 3566777654
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.5e-14 Score=135.37 Aligned_cols=192 Identities=16% Similarity=0.089 Sum_probs=129.1
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
..++|+|+||||+|+||++++++|.++|++|++++|++.+.... ....+..+.+|+.|.+.+.+.+.++|++||+||
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAG 254 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHG 254 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCC
Confidence 34678999999999999999999999999999999876432111 111356788999999999998999999999998
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHh----CCC---C-eEEEeecccccCCCcccccccCCCCCCCCCCCCCCc
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRI----SGV---K-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA 171 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~---~-~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~ 171 (374)
.........++.+..+++|+.++..+++++.. .+. + .+|++|++.. .......
T Consensus 255 i~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~-------------------~~~~~~~ 315 (406)
T PRK07424 255 INVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEV-------------------NPAFSPL 315 (406)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccc-------------------cCCCchH
Confidence 65322222234456789999999999888643 221 2 3455544211 1112347
Q ss_pred hHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHH
Q 017290 172 YGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG 251 (374)
Q Consensus 172 y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 251 (374)
|+.+|...+.+..-.....++.+..+.|+.+-.+ . . ....+..+|+|+.
T Consensus 316 Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~---------~------------------~----~~~~~spe~vA~~ 364 (406)
T PRK07424 316 YELSKRALGDLVTLRRLDAPCVVRKLILGPFKSN---------L------------------N----PIGVMSADWVAKQ 364 (406)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCC---------C------------------C----cCCCCCHHHHHHH
Confidence 9999999988764333333444444444332110 0 0 0123678999999
Q ss_pred HHhhhccCCCCcE
Q 017290 252 VLRLTKSDFREPV 264 (374)
Q Consensus 252 i~~~~~~~~~~~~ 264 (374)
++.+++++...++
T Consensus 365 il~~i~~~~~~i~ 377 (406)
T PRK07424 365 ILKLAKRDFRNII 377 (406)
T ss_pred HHHHHHCCCCEEE
Confidence 9999988766544
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.7e-14 Score=127.89 Aligned_cols=195 Identities=17% Similarity=0.134 Sum_probs=132.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEeccc--chhhHhhh-------c
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLR--VMDNCLKV-------T 88 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~--~~~~~~~~-------~ 88 (374)
..++|+||||+|+||.++++.|++.|++|++++|+....... ....+.++.+|++ +.+.+..+ +
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 90 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQF 90 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHh
Confidence 678999999999999999999999999999999986432111 1123456777875 34433332 3
Q ss_pred cCCCEEEEcccccCCc----ccccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 89 KGVDHVFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 89 ~~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
.++|+|||+|+..... .......+..+++|+.++..+++++ .+.+..+||++||.....
T Consensus 91 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~------------- 157 (247)
T PRK08945 91 GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQ------------- 157 (247)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcC-------------
Confidence 3789999999864321 1112234556889999877777765 455677999999965431
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+......|+.+|...+.+++.++.+. ++.+++++|+.+-.+... .... . .
T Consensus 158 ----~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~-------------~~~~-~-------~-- 210 (247)
T PRK08945 158 ----GRANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA-------------SAFP-G-------E-- 210 (247)
T ss_pred ----CCCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh-------------hhcC-c-------c--
Confidence 11234579999999999999887654 578888888877654110 0000 0 0
Q ss_pred ccccceeHHHHHHHHHhhhccC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD 259 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~ 259 (374)
....+...+|+++.++.++...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~ 232 (247)
T PRK08945 211 DPQKLKTPEDIMPLYLYLMGDD 232 (247)
T ss_pred cccCCCCHHHHHHHHHHHhCcc
Confidence 0113567899999999987654
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.62 E-value=4e-15 Score=122.91 Aligned_cols=275 Identities=13% Similarity=0.084 Sum_probs=177.8
Q ss_pred CCCeEEEEcCcchhHHHHHH-----HHHhCC----CEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEE
Q 017290 25 EKLRISVTGAGGFIASHIAR-----RLKSEG----HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi 95 (374)
+.++.++-+++|+|+..|.. ++-+.+ |+|++++|++.... +++...|..- +.-.|+..+
T Consensus 11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~r------itw~el~~~G------ip~sc~a~v 78 (315)
T KOG3019|consen 11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKAR------ITWPELDFPG------IPISCVAGV 78 (315)
T ss_pred ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcc------cccchhcCCC------CceehHHHH
Confidence 44667778899999988887 444444 89999999986532 2222222211 111344455
Q ss_pred EcccccC---CcccccCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCCCCCCCCCCCC
Q 017290 96 NLAADMG---GMGFIQSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170 (374)
Q Consensus 96 ~~a~~~~---~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~ 170 (374)
++++... ...|.+.=..+.+...++.++.|.++..++. .+-+|.+|..++|-..... .++|++ +....+
T Consensus 79 na~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~----eY~e~~--~~qgfd 152 (315)
T KOG3019|consen 79 NAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQ----EYSEKI--VHQGFD 152 (315)
T ss_pred hhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccccc----cccccc--ccCChH
Confidence 5444321 1124443345556667778899999998876 4479999999999875533 367766 222333
Q ss_pred chHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHH-hccCCceEeeCCCcccccceeHHHHH
Q 017290 171 AYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKA-LTSTDKFEMWGDGLQTRSFTFIDECV 249 (374)
Q Consensus 171 ~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~Dva 249 (374)
.....-...|..+.... .+.+.+++|.|.|.|.++. .+..|+.-+ +-.+. ..|+|.+.++|||++|++
T Consensus 153 ~~srL~l~WE~aA~~~~--~~~r~~~iR~GvVlG~gGG------a~~~M~lpF~~g~GG---PlGsG~Q~fpWIHv~DL~ 221 (315)
T KOG3019|consen 153 ILSRLCLEWEGAALKAN--KDVRVALIRIGVVLGKGGG------ALAMMILPFQMGAGG---PLGSGQQWFPWIHVDDLV 221 (315)
T ss_pred HHHHHHHHHHHHhhccC--cceeEEEEEEeEEEecCCc------chhhhhhhhhhccCC---cCCCCCeeeeeeehHHHH
Confidence 33333334444444432 3489999999999998754 333333222 21133 238999999999999999
Q ss_pred HHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCC--------CCC----CcccccchHHHHHhcCC
Q 017290 250 EGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG--------PEG----VRGRNSDNTLIKEKLGW 316 (374)
Q Consensus 250 ~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~--------~~~----~~~~~~d~~k~~~~lg~ 316 (374)
..|..+++++ ..++.|-..+++.+..|+.+.+.++++++. +..+|. +.. ..+..+-.-++. .+||
T Consensus 222 ~li~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~-~~pvP~fvvqA~fG~erA~~vLeGqKV~Pqral-~~Gf 299 (315)
T KOG3019|consen 222 NLIYEALENPSVKGVINGVAPNPVRNGEFCQQLGSALSRPS-WLPVPDFVVQALFGPERATVVLEGQKVLPQRAL-ELGF 299 (315)
T ss_pred HHHHHHHhcCCCCceecccCCCccchHHHHHHHHHHhCCCc-ccCCcHHHHHHHhCccceeEEeeCCcccchhHh-hcCc
Confidence 9999999996 699999999999999999999999998863 222221 111 111222333444 4799
Q ss_pred CcCC-CHHHHHHHHH
Q 017290 317 APSM-KLKDGLRITY 330 (374)
Q Consensus 317 ~p~~-~~~~~l~~~~ 330 (374)
+.+| .+.+++++++
T Consensus 300 ~f~yp~vk~Al~~i~ 314 (315)
T KOG3019|consen 300 EFKYPYVKDALRAIM 314 (315)
T ss_pred eeechHHHHHHHHHh
Confidence 8877 4788888764
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=8.3e-15 Score=131.90 Aligned_cols=163 Identities=20% Similarity=0.136 Sum_probs=117.0
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc----c---cccceeEEecccchhhHhhhcc-------CCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE----D---MFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~---~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
|+++||||+|.||.++++.|+++|++|++++|++...... . ...+.++.+|+.+.+.+..+++ ++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 5799999999999999999999999999999876432111 0 1113456799999887665543 589
Q ss_pred EEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHHh----C-CCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 93 HVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRI----S-GVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 93 ~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~----~-~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
+|||+++...... ....+.+..+++|+.++..+++++.. . ...++|++||...+.
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~----------------- 143 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV----------------- 143 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC-----------------
Confidence 9999998643211 12223355688999999999888642 2 234899999975431
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHh---hhCCcEEEEeeCcccCCC
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTK---DFGIECRVGRFHNIYGPF 206 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~g~~ 206 (374)
+......|+.+|...+.+.+.++. ..++++++++||.+.++.
T Consensus 144 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~ 188 (272)
T PRK07832 144 ALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL 188 (272)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence 112245799999988888776663 357999999999998764
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.5e-14 Score=125.22 Aligned_cols=198 Identities=15% Similarity=0.027 Sum_probs=136.2
Q ss_pred EEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 29 ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
|+||||+|+||.++++.|+++|++|+++.|+...... ....++.++.+|+++.+++..+++ ++|++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999999999999999999998876432111 011246788999999888766553 57999
Q ss_pred EEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHH-----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 95 FNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASR-----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 95 i~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~-----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
||+++...... ....+....+..|+.++.++++++. +.+..++|++||...+.. .
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------------~ 143 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMG-----------------N 143 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccC-----------------C
Confidence 99998653211 1223345578899999988887652 234458999999654321 1
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
.....|+.+|...+.+.+.++.+ .+++++.++|+.+..+... .. ......... . . +...+.
T Consensus 144 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~~-~~~~~~~~~-~--~-------~~~~~~ 207 (239)
T TIGR01831 144 RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLA-----EV-EHDLDEALK-T--V-------PMNRMG 207 (239)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccch-----hh-hHHHHHHHh-c--C-------CCCCCC
Confidence 23357999999999888887655 4799999999999766421 11 111111111 0 1 112356
Q ss_pred eHHHHHHHHHhhhccC
Q 017290 244 FIDECVEGVLRLTKSD 259 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~ 259 (374)
..+|+++++..++..+
T Consensus 208 ~~~~va~~~~~l~~~~ 223 (239)
T TIGR01831 208 QPAEVASLAGFLMSDG 223 (239)
T ss_pred CHHHHHHHHHHHcCch
Confidence 7799999999998764
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.5e-14 Score=146.38 Aligned_cols=198 Identities=15% Similarity=0.028 Sum_probs=143.1
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
..++|+++||||+|.||+++++.|+++|++|++++|++...... ....+.++.+|+.|.+.+.++++
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 447 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG 447 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 44578999999999999999999999999999999986542211 11246788999999998877765
Q ss_pred CCCEEEEcccccCCcccc-----cCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 GVDHVFNLAADMGGMGFI-----QSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~-----~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+|+........ ..+.+..+++|+.++..++.++ ++.+..++|++||...|...
T Consensus 448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 516 (657)
T PRK07201 448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNA----------- 516 (657)
T ss_pred CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC-----------
Confidence 689999999964211111 1234556888998887776654 44566699999998776421
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
.....|+.+|...+.+++.++.+ .++.+++++||.+..+.... .. .+.
T Consensus 517 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~-----------------~~---~~~--- 567 (657)
T PRK07201 517 ------PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAP-----------------TK---RYN--- 567 (657)
T ss_pred ------CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCc-----------------cc---ccc---
Confidence 22457999999999999988765 47999999999998653210 00 000
Q ss_pred ccccceeHHHHHHHHHhhhccCCC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSDFR 261 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~~~ 261 (374)
....+..+++|+.++..+.....
T Consensus 568 -~~~~~~~~~~a~~i~~~~~~~~~ 590 (657)
T PRK07201 568 -NVPTISPEEAADMVVRAIVEKPK 590 (657)
T ss_pred -CCCCCCHHHHHHHHHHHHHhCCc
Confidence 12356789999999987765433
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.1e-14 Score=125.28 Aligned_cols=195 Identities=11% Similarity=0.044 Sum_probs=137.6
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-ccccceeEEecccchhhHhhhcc----CCCEEEEccccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-DMFCHEFHLVDLRVMDNCLKVTK----GVDHVFNLAADM 101 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~i~~~~~dl~~~~~~~~~~~----~~d~vi~~a~~~ 101 (374)
|+++||||+|.||+++++.|+++|++|++++|+..+.... ...++.++.+|+.+.+.+..+++ ++|++||+++..
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~ 80 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS 80 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence 4799999999999999999999999999999986543221 11245788899999998887764 589999999742
Q ss_pred CC---c---cc--ccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCc
Q 017290 102 GG---M---GF--IQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA 171 (374)
Q Consensus 102 ~~---~---~~--~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~ 171 (374)
.. . .. ...+....+++|+.+...+++++... .-.++|++||... .....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~---------------------~~~~~ 139 (223)
T PRK05884 81 WDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP---------------------PAGSA 139 (223)
T ss_pred ccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC---------------------CCccc
Confidence 10 0 01 12234567889999998888876541 1248999998530 12357
Q ss_pred hHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHH
Q 017290 172 YGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 248 (374)
Q Consensus 172 y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 248 (374)
|+.+|...+.+++.++.+ .++++..+.||.+..+. ... .. . .+.-..+|+
T Consensus 140 Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~-------------~~~-~~-~------------~p~~~~~~i 192 (223)
T PRK05884 140 EAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPG-------------YDG-LS-R------------TPPPVAAEI 192 (223)
T ss_pred cHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchh-------------hhh-cc-C------------CCCCCHHHH
Confidence 999999999999988765 46899999999885431 000 00 0 011267999
Q ss_pred HHHHHhhhccC----CCCcEEecCC
Q 017290 249 VEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 249 a~~i~~~~~~~----~~~~~~i~~~ 269 (374)
++++..++..+ .+.++.+.++
T Consensus 193 a~~~~~l~s~~~~~v~G~~i~vdgg 217 (223)
T PRK05884 193 ARLALFLTTPAARHITGQTLHVSHG 217 (223)
T ss_pred HHHHHHHcCchhhccCCcEEEeCCC
Confidence 99999988754 2555666544
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.9e-14 Score=128.64 Aligned_cols=221 Identities=13% Similarity=0.034 Sum_probs=144.6
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc---CCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK---GVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~---~~d~ 93 (374)
..+++++||||+|.||+++++.|++.|++|++++|+..+.... ....+.++.+|+++.+.+..+++ ++|+
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 84 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI 84 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence 3568999999999999999999999999999999986532221 01245788899999888877664 6899
Q ss_pred EEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 94 VFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 94 vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
+||+++........ ..+.+..+.+|+.+...+++++ ++.+..++|++||..... +.
T Consensus 85 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-----------------~~ 147 (259)
T PRK06125 85 LVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN-----------------PD 147 (259)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC-----------------CC
Confidence 99999864321121 2233456788998888777765 334334899998864321 12
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhcc--CCc--eEeeCCCccc
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTS--TDK--FEMWGDGLQT 239 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~ 239 (374)
.....|..+|...+.+++.++.+ .++++..+.||.+..+. ...++...... +.. ...+....+.
T Consensus 148 ~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (259)
T PRK06125 148 ADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDR---------MLTLLKGRARAELGDESRWQELLAGLPL 218 (259)
T ss_pred CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHH---------HHHHHHhhhhcccCCHHHHHHHhccCCc
Confidence 23456899999999999888653 47999999999887542 11111100000 000 0000000111
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
..+...+|+|++++.++... .+..+.+.++.
T Consensus 219 ~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~ 253 (259)
T PRK06125 219 GRPATPEEVADLVAFLASPRSGYTSGTVVTVDGGI 253 (259)
T ss_pred CCCcCHHHHHHHHHHHcCchhccccCceEEecCCe
Confidence 24678899999999988653 35566666553
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.9e-14 Score=124.84 Aligned_cols=216 Identities=11% Similarity=-0.027 Sum_probs=143.6
Q ss_pred CCCCeEEEEcCc--chhHHHHHHHHHhCCCEEEEEeCCCCccc---ccccccceeEEecccchhhHhhhcc-------CC
Q 017290 24 SEKLRISVTGAG--GFIASHIARRLKSEGHYIIASDWKKNEHM---TEDMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 24 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
+.+|+++||||+ +-||++++++|++.|++|++..|+..... ......+.++.+|+++.+++.++++ ++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 456899999999 79999999999999999999988732110 1111245788999999887776553 58
Q ss_pred CEEEEcccccCC----c---ccccCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCCCC
Q 017290 92 DHVFNLAADMGG----M---GFIQSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 92 d~vi~~a~~~~~----~---~~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
|++||+|+.... . +....+.+..+++|+.+...++.++...- -.++|++||.....
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~--------------- 149 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER--------------- 149 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc---------------
Confidence 999999996431 0 11122345567889988888877765421 23899999864321
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+......|+.+|...+.+.+.++.+ .++.+..+.||.+-.+.... .. ........... . . +.
T Consensus 150 --~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~--~~-~~~~~~~~~~~-~--~-------p~ 214 (252)
T PRK06079 150 --AIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTG--IK-GHKDLLKESDS-R--T-------VD 214 (252)
T ss_pred --cCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccc--CC-ChHHHHHHHHh-c--C-------cc
Confidence 1122357999999999999998865 47999999999997652110 00 01112121111 1 1 11
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
..+...+|+|.++..++... .+.++.+.++
T Consensus 215 ~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg 248 (252)
T PRK06079 215 GVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKG 248 (252)
T ss_pred cCCCCHHHHHHHHHHHhCcccccccccEEEeCCc
Confidence 24678899999999988654 2555555544
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-13 Score=122.36 Aligned_cols=191 Identities=15% Similarity=0.098 Sum_probs=127.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-cccccceeEEecccchhhHhhhccCCCEEEEcccccCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-EDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGG 103 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~ 103 (374)
++++++||||+|.||+++++.|+++|++|++++|+...... ........+.+|+++.+++.+.+.++|++|||||....
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~~ 92 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGINPG 92 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccCCc
Confidence 56899999999999999999999999999999987622111 11111256789999999999888899999999996432
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhC-------CCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhH
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRIS-------GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEK 176 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-------~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK 176 (374)
......+....+++|+.++..+++++... +-..++..||...+. + .....|+.+|
T Consensus 93 ~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~-----------------~-~~~~~Y~aSK 154 (245)
T PRK12367 93 GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ-----------------P-ALSPSYEISK 154 (245)
T ss_pred CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC-----------------C-CCCchhHHHH
Confidence 22223345667899999999998876431 112344444432211 1 1235799999
Q ss_pred HHHHHHHHHHHh-------hhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHH
Q 017290 177 LASEELCKHYTK-------DFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249 (374)
Q Consensus 177 ~~~E~~~~~~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 249 (374)
...+.+. .+.. ..++.+..+.|+.+..+. . . ...+..+|+|
T Consensus 155 aal~~~~-~l~~~l~~e~~~~~i~v~~~~pg~~~t~~------------------~---------~----~~~~~~~~vA 202 (245)
T PRK12367 155 RLIGQLV-SLKKNLLDKNERKKLIIRKLILGPFRSEL------------------N---------P----IGIMSADFVA 202 (245)
T ss_pred HHHHHHH-HHHHHHHHhhcccccEEEEecCCCccccc------------------C---------c----cCCCCHHHHH
Confidence 9975443 3322 245666666666542110 0 0 0146789999
Q ss_pred HHHHhhhccCCCCcEE
Q 017290 250 EGVLRLTKSDFREPVN 265 (374)
Q Consensus 250 ~~i~~~~~~~~~~~~~ 265 (374)
+.++.++++....++.
T Consensus 203 ~~i~~~~~~~~~~~~~ 218 (245)
T PRK12367 203 KQILDQANLGLYLIIV 218 (245)
T ss_pred HHHHHHHhcCCceEEE
Confidence 9999999876655544
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.4e-14 Score=142.75 Aligned_cols=167 Identities=20% Similarity=0.087 Sum_probs=125.6
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
.....+++|||||+|+||++++++|+++|++|++++|+....... ...++.++.+|+++.+.+.++++
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 344668999999999999999999999999999999986432211 11246788999999998877764
Q ss_pred -CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH----hCC-CCeEEEeecccccCCCcccccccCCCC
Q 017290 90 -GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISG-VKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+||....... ...+....+++|+.++.++++++. +.+ ..++|++||...|..
T Consensus 391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------ 458 (582)
T PRK05855 391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAP------------ 458 (582)
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC------------
Confidence 48999999997542111 222345567799999888877653 333 248999999887642
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCC
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGP 205 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~ 205 (374)
......|+.+|...+.+++.++.+ .|+++++++||.+-.+
T Consensus 459 -----~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 501 (582)
T PRK05855 459 -----SRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTN 501 (582)
T ss_pred -----CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence 223468999999999998887654 4799999999988654
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.8e-13 Score=120.77 Aligned_cols=210 Identities=14% Similarity=0.038 Sum_probs=138.3
Q ss_pred CCCCeEEEEcCcc--hhHHHHHHHHHhCCCEEEEEeCCCCc--------cc---c----c--ccccceeEEecccchhhH
Q 017290 24 SEKLRISVTGAGG--FIASHIARRLKSEGHYIIASDWKKNE--------HM---T----E--DMFCHEFHLVDLRVMDNC 84 (374)
Q Consensus 24 ~~~~~ilItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~---~----~--~~~~i~~~~~dl~~~~~~ 84 (374)
..+++|+||||+| .||.+++++|+++|++|+++.|.... .. . . ....+.++.+|+++.+++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i 83 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP 83 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 3568999999995 79999999999999999887543110 00 0 0 011356788999998888
Q ss_pred hhhcc-------CCCEEEEcccccCCcccccC---CcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCc
Q 017290 85 LKVTK-------GVDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFK 150 (374)
Q Consensus 85 ~~~~~-------~~d~vi~~a~~~~~~~~~~~---~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~ 150 (374)
.++++ .+|++||+|+........+. +.+..+++|+.+...+..++ ++.+..++|++||.....
T Consensus 84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--- 160 (256)
T PRK12859 84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG--- 160 (256)
T ss_pred HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC---
Confidence 77664 47999999996532212222 23446888998877775443 333334999999975431
Q ss_pred ccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccC
Q 017290 151 QLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTST 227 (374)
Q Consensus 151 ~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~ 227 (374)
+..+...|+.+|...+.+++.++.+ .+++++.++||.+-.+.. . ... ...+...
T Consensus 161 --------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~-----~---~~~-~~~~~~~ 217 (256)
T PRK12859 161 --------------PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWM-----T---EEI-KQGLLPM 217 (256)
T ss_pred --------------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCC-----C---HHH-HHHHHhc
Confidence 2234568999999999999888765 479999999998865421 0 111 1111100
Q ss_pred CceEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecC
Q 017290 228 DKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGS 268 (374)
Q Consensus 228 ~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~ 268 (374)
. ....+...+|+|+++..++... .+..+.+.+
T Consensus 218 ~---------~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dg 253 (256)
T PRK12859 218 F---------PFGRIGEPKDAARLIKFLASEEAEWITGQIIHSEG 253 (256)
T ss_pred C---------CCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCC
Confidence 0 1123457899999998887653 244455444
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-13 Score=121.21 Aligned_cols=194 Identities=11% Similarity=0.053 Sum_probs=129.9
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCcccccccccceeEEecccchhhHhhhc---cCCCEEEEccccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT---KGVDHVFNLAADM 101 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~---~~~d~vi~~a~~~ 101 (374)
|+|+||||+|+||+++++.|+++| +.|....|+.... .....+.++.+|+++.+.+.++. .++|+|||++|..
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~ 78 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGML 78 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCccc
Confidence 689999999999999999999985 5666666654332 12235678899999988766644 4789999999975
Q ss_pred CCcc------ccc---CCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 102 GGMG------FIQ---SNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 102 ~~~~------~~~---~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
.... ... ......+.+|+.+...++.++.. .+..+++++||... . +.+. +..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~--~---------~~~~---~~~~ 144 (235)
T PRK09009 79 HTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVG--S---------ISDN---RLGG 144 (235)
T ss_pred cccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccc--c---------cccC---CCCC
Confidence 3210 011 11234567788877777665543 33458999987421 1 1111 1223
Q ss_pred CCchHHhHHHHHHHHHHHHhh-----hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 169 QDAYGLEKLASEELCKHYTKD-----FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
...|+.+|...+.+++.++.+ .++.+..+.||.+..+... .+ ... .....++
T Consensus 145 ~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~---------~~-----~~~---------~~~~~~~ 201 (235)
T PRK09009 145 WYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSK---------PF-----QQN---------VPKGKLF 201 (235)
T ss_pred cchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCc---------ch-----hhc---------cccCCCC
Confidence 468999999999999988865 3677888999988755311 00 000 0112357
Q ss_pred eHHHHHHHHHhhhccC
Q 017290 244 FIDECVEGVLRLTKSD 259 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~ 259 (374)
..+|+|+++..++...
T Consensus 202 ~~~~~a~~~~~l~~~~ 217 (235)
T PRK09009 202 TPEYVAQCLLGIIANA 217 (235)
T ss_pred CHHHHHHHHHHHHHcC
Confidence 8899999999998765
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-13 Score=125.48 Aligned_cols=212 Identities=14% Similarity=0.096 Sum_probs=139.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC---------Cccccc------ccccceeEEecccchhhHhhhcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK---------NEHMTE------DMFCHEFHLVDLRVMDNCLKVTK 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~ 89 (374)
+.++++||||++.||+++++.|++.|++|++++|+. ...... ....+.++.+|+++.+++..+++
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 84 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD 84 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence 568999999999999999999999999999988764 110000 01135678899999887766553
Q ss_pred -------CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHH----hC---C---CCeEEEeecccccCCC
Q 017290 90 -------GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASR----IS---G---VKRFFYASSACIYPEF 149 (374)
Q Consensus 90 -------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~----~~---~---~~~~i~~Ss~~vy~~~ 149 (374)
++|++||+|+...... ....+.+..+++|+.++..+++++. +. + ..++|++||...+.
T Consensus 85 ~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~-- 162 (286)
T PRK07791 85 AAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ-- 162 (286)
T ss_pred HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc--
Confidence 6899999999753211 2223345678899999888877653 21 1 13899999965432
Q ss_pred cccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhcc
Q 017290 150 KQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTS 226 (374)
Q Consensus 150 ~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~ 226 (374)
+......|+.+|...+.+.+.++.+ .++++..+.|+ +..+. ..........
T Consensus 163 ---------------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~---------~~~~~~~~~~- 216 (286)
T PRK07791 163 ---------------GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRM---------TETVFAEMMA- 216 (286)
T ss_pred ---------------CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCc---------chhhHHHHHh-
Confidence 1123468999999999999888765 57999999997 42211 1111111111
Q ss_pred CCceEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 227 TDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 227 ~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
.. ......+...+|+|.+++.++... .+..+.+.++..
T Consensus 217 ~~-------~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~ 258 (286)
T PRK07791 217 KP-------EEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKI 258 (286)
T ss_pred cC-------cccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCce
Confidence 00 011123567899999999988653 255566655433
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.2e-14 Score=111.92 Aligned_cols=158 Identities=15% Similarity=0.087 Sum_probs=124.8
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
+-+++|..+|+||||-.|+.+++++++.+. +|+++.|++.. .......+.....|...-+++....+++|+.|.|.+
T Consensus 14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~-d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLg 92 (238)
T KOG4039|consen 14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELP-DPATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALG 92 (238)
T ss_pred HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCC-CccccceeeeEEechHHHHHHHhhhcCCceEEEeec
Confidence 446789999999999999999999999973 89999988622 122223456667788777888888889999999998
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHH
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAS 179 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~ 179 (374)
...+ ....+..+.+.-.....+.+++++.|+++|+.+||.++ .+...-.|...|-+.
T Consensus 93 TTRg----kaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GA-------------------d~sSrFlY~k~KGEv 149 (238)
T KOG4039|consen 93 TTRG----KAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGA-------------------DPSSRFLYMKMKGEV 149 (238)
T ss_pred cccc----ccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCC-------------------Ccccceeeeeccchh
Confidence 6533 22356677778888889999999999999999999865 334456899999999
Q ss_pred HHHHHHHHhhhCC-cEEEEeeCcccCCCC
Q 017290 180 EELCKHYTKDFGI-ECRVGRFHNIYGPFG 207 (374)
Q Consensus 180 E~~~~~~~~~~~~-~~~ilR~~~v~g~~~ 207 (374)
|+-+..+ ++ .++|+|||.+.+...
T Consensus 150 E~~v~eL----~F~~~~i~RPG~ll~~R~ 174 (238)
T KOG4039|consen 150 ERDVIEL----DFKHIIILRPGPLLGERT 174 (238)
T ss_pred hhhhhhc----cccEEEEecCcceecccc
Confidence 9988874 33 578999999998754
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1e-13 Score=124.72 Aligned_cols=217 Identities=12% Similarity=-0.051 Sum_probs=142.3
Q ss_pred CCCCCeEEEEcCc--chhHHHHHHHHHhCCCEEEEEeCCCCc---cccc-c--cccceeEEecccchhhHhhhcc-----
Q 017290 23 PSEKLRISVTGAG--GFIASHIARRLKSEGHYIIASDWKKNE---HMTE-D--MFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 23 ~~~~~~ilItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~-~--~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
.++.|.++||||+ +-||+++++.|++.|++|++.+|+... .... . ... .++.+|++|.+.+..+++
T Consensus 2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~ 80 (274)
T PRK08415 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKD 80 (274)
T ss_pred ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHH
Confidence 3467899999997 799999999999999999999887421 0000 0 112 467899999888776653
Q ss_pred --CCCEEEEcccccCC-------cccccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCC
Q 017290 90 --GVDHVFNLAADMGG-------MGFIQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 90 --~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
++|++||+||.... .+....+.+..+++|+.++..+.+++... .-.++|++||.....
T Consensus 81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~----------- 149 (274)
T PRK08415 81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK----------- 149 (274)
T ss_pred cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc-----------
Confidence 68999999996421 01122334557889999988887766431 113899999864321
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCC
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
+......|+.+|...+.+.+.++.+ .++.+..+.||.+..+.... . ... ........ ..
T Consensus 150 ------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~--~-~~~-~~~~~~~~--~~------ 211 (274)
T PRK08415 150 ------YVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASG--I-GDF-RMILKWNE--IN------ 211 (274)
T ss_pred ------CCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhc--c-chh-hHHhhhhh--hh------
Confidence 1112357999999999999998865 46899999999887542110 0 000 00000000 00
Q ss_pred CcccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.+...+...+|+|.+++.++... .+..+.+.++.
T Consensus 212 -~pl~r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG~ 249 (274)
T PRK08415 212 -APLKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGY 249 (274)
T ss_pred -CchhccCCHHHHHHHHHHHhhhhhhcccccEEEEcCcc
Confidence 01223577899999999988753 35566666553
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.7e-13 Score=120.94 Aligned_cols=216 Identities=13% Similarity=-0.002 Sum_probs=139.3
Q ss_pred CCCCeEEEEcCc--chhHHHHHHHHHhCCCEEEEEeCCCCcccc---c----ccccceeEEecccchhhHhhhcc-----
Q 017290 24 SEKLRISVTGAG--GFIASHIARRLKSEGHYIIASDWKKNEHMT---E----DMFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 24 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~----~~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
...+.++||||+ +-||.++++.|++.|++|+++.|+...... . ....+.++.+|++|.+.+..+++
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 356899999997 899999999999999999998875321110 0 11245678899999888776653
Q ss_pred --CCCEEEEcccccCC----cccccC---CcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCC
Q 017290 90 --GVDHVFNLAADMGG----MGFIQS---NHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 90 --~~d~vi~~a~~~~~----~~~~~~---~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
++|++||||+.... ....+. .....+++|+.+...+++++...- -.++|++||.....
T Consensus 85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----------- 153 (257)
T PRK08594 85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER----------- 153 (257)
T ss_pred CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc-----------
Confidence 58999999986421 011111 223356778888777766654321 13899999965421
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCC
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
+......|+.+|...+.+.+.++.+ .++++..+.||.+..+.... ... ....... .. .
T Consensus 154 ------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~--~~~-~~~~~~~-~~---------~ 214 (257)
T PRK08594 154 ------VVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKG--VGG-FNSILKE-IE---------E 214 (257)
T ss_pred ------CCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhh--hcc-ccHHHHH-Hh---------h
Confidence 1122357999999999999988765 36999999999886542100 000 0011111 10 0
Q ss_pred CcccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
..+...+...+|++.+++.++... .+..+.+.++
T Consensus 215 ~~p~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg 252 (257)
T PRK08594 215 RAPLRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSG 252 (257)
T ss_pred cCCccccCCHHHHHHHHHHHcCcccccccceEEEECCc
Confidence 011224577899999999988654 2455666544
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.5e-13 Score=126.22 Aligned_cols=166 Identities=11% Similarity=-0.003 Sum_probs=117.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc--------cccceeEEecccc--hhh---Hhhhcc--
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED--------MFCHEFHLVDLRV--MDN---CLKVTK-- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~i~~~~~dl~~--~~~---~~~~~~-- 89 (374)
.++.++||||+|.||++++++|+++|++|++++|++++..... ...+..+.+|+.+ .+. +.+.+.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 4689999999999999999999999999999999875422110 1235667788874 222 233333
Q ss_pred CCCEEEEcccccCCc--cc---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 GVDHVFNLAADMGGM--GF---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~--~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+||..... .+ ..++.+..+++|+.++..+.+++. +.+..++|++||...+...
T Consensus 132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~----------- 200 (320)
T PLN02780 132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP----------- 200 (320)
T ss_pred CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC-----------
Confidence 356999999975311 11 112234568899999888877653 4455699999997654210
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCC
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGP 205 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~ 205 (374)
+......|+.+|...+.+.+.++.+. |++++++.||.+-.+
T Consensus 201 ----~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~ 244 (320)
T PLN02780 201 ----SDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATK 244 (320)
T ss_pred ----CCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecC
Confidence 01124689999999999999987664 799999999988654
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.6e-13 Score=119.57 Aligned_cols=217 Identities=15% Similarity=0.038 Sum_probs=142.0
Q ss_pred CCCCCeEEEEcCc--chhHHHHHHHHHhCCCEEEEEeCCCCccc---cc--ccccceeEEecccchhhHhhhcc------
Q 017290 23 PSEKLRISVTGAG--GFIASHIARRLKSEGHYIIASDWKKNEHM---TE--DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 23 ~~~~~~ilItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~--~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
.+.++.++||||+ +-||.++++.|++.|++|++++|+..... .. ......++.+|+++.+++.++++
T Consensus 7 ~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 7 PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW 86 (258)
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc
Confidence 3466899999998 49999999999999999999988753211 00 00123578899999888776653
Q ss_pred -CCCEEEEcccccCCc-------ccccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCC
Q 017290 90 -GVDHVFNLAADMGGM-------GFIQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|++||||+..... .....+.+..+++|+.+...+++++... .-.++|++||.....
T Consensus 87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~------------ 154 (258)
T PRK07533 87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK------------ 154 (258)
T ss_pred CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc------------
Confidence 689999999864310 1122234567889999988888766432 113799999864321
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
+......|+.+|...+.+.+.++.+ .++++..+.||.+-.+.... ... .......... . .
T Consensus 155 -----~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~--~~~-~~~~~~~~~~-~--~------ 217 (258)
T PRK07533 155 -----VVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASG--IDD-FDALLEDAAE-R--A------ 217 (258)
T ss_pred -----CCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhc--cCC-cHHHHHHHHh-c--C------
Confidence 1122357999999999999888765 46999999999886542110 000 1111111111 0 1
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
....+...+|+|.+++.++..+ .+..+.+.++
T Consensus 218 -p~~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg 253 (258)
T PRK07533 218 -PLRRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGG 253 (258)
T ss_pred -CcCCCCCHHHHHHHHHHHhChhhccccCcEEeeCCc
Confidence 1123678899999999988653 2455555543
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.7e-13 Score=120.62 Aligned_cols=228 Identities=15% Similarity=0.051 Sum_probs=142.4
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc----c--cccceeEEecccchhhHhhhcc------CCCE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE----D--MFCHEFHLVDLRVMDNCLKVTK------GVDH 93 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--~~~i~~~~~dl~~~~~~~~~~~------~~d~ 93 (374)
.+.++|||+ |.||+++++.|. +|++|++++|++...... . ...+.++.+|+.+.+.+..+++ ++|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 467889997 789999999996 899999999976432111 1 1245678899999888877664 5899
Q ss_pred EEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCc-cccccc---CCCCCCC--CC
Q 017290 94 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFK-QLETNV---SLKESDA--WP 165 (374)
Q Consensus 94 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~-~~~~~~---~~~e~~~--~~ 165 (374)
+||+|+... ...+....+++|+.++..+++++... .-.++|++||........ ..+.+. .++..+. .+
T Consensus 80 li~nAG~~~----~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (275)
T PRK06940 80 LVHTAGVSP----SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLP 155 (275)
T ss_pred EEECCCcCC----chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccc
Confidence 999999642 23456778999999999998877542 112567777755432110 000000 0000000 00
Q ss_pred -------CCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCC
Q 017290 166 -------AEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 166 -------~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
......|+.+|...+.+.+.++.+ .++.+..+.||.+..+..... .............. .
T Consensus 156 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~-~~~~~~~~~~~~~~-~-------- 225 (275)
T PRK06940 156 FLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDE-LNGPRGDGYRNMFA-K-------- 225 (275)
T ss_pred cccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhh-hcCCchHHHHHHhh-h--------
Confidence 013467999999999998887665 369999999999876531100 00000011111111 0
Q ss_pred CcccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.....+...+|+|++++.++... .+..+.+.++.
T Consensus 226 -~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~ 263 (275)
T PRK06940 226 -SPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGA 263 (275)
T ss_pred -CCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence 01224678899999999988643 25566666553
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.9e-13 Score=119.96 Aligned_cols=216 Identities=12% Similarity=-0.005 Sum_probs=142.0
Q ss_pred CCCCeEEEEcCc--chhHHHHHHHHHhCCCEEEEEeCCCCccc------cc--ccccceeEEecccchhhHhhhcc----
Q 017290 24 SEKLRISVTGAG--GFIASHIARRLKSEGHYIIASDWKKNEHM------TE--DMFCHEFHLVDLRVMDNCLKVTK---- 89 (374)
Q Consensus 24 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~--~~~~i~~~~~dl~~~~~~~~~~~---- 89 (374)
.++++++||||+ +-||++++++|++.|++|++..|+..... .. ......++.+|++|.+.+.++++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 356899999986 79999999999999999988766532110 00 01124578899999988876653
Q ss_pred ---CCCEEEEcccccCC----ccc---ccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccC
Q 017290 90 ---GVDHVFNLAADMGG----MGF---IQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVS 157 (374)
Q Consensus 90 ---~~d~vi~~a~~~~~----~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~ 157 (374)
++|++||+|+.... ... ...+.+..+++|+.++..+++++... .-.++|++||.....
T Consensus 84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~---------- 153 (258)
T PRK07370 84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR---------- 153 (258)
T ss_pred HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc----------
Confidence 68999999996421 111 22234567889999988887765431 114899999964321
Q ss_pred CCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeC
Q 017290 158 LKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWG 234 (374)
Q Consensus 158 ~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (374)
+......|+.+|...+.+.+.++.+. ++.+..+.||.+-.+.... ... ....... +..
T Consensus 154 -------~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~--~~~-~~~~~~~-~~~-------- 214 (258)
T PRK07370 154 -------AIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSA--VGG-ILDMIHH-VEE-------- 214 (258)
T ss_pred -------CCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhc--ccc-chhhhhh-hhh--------
Confidence 11234579999999999999988654 6899999999987642110 000 0111111 110
Q ss_pred CCcccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
..+...+...+|++.++..++..+ .+..+.+.++
T Consensus 215 -~~p~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg 252 (258)
T PRK07370 215 -KAPLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAG 252 (258)
T ss_pred -cCCcCcCCCHHHHHHHHHHHhChhhccccCcEEEECCc
Confidence 011224667899999999988754 2455666554
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.4e-13 Score=121.20 Aligned_cols=217 Identities=15% Similarity=0.010 Sum_probs=141.6
Q ss_pred CCCCeEEEEcCcc--hhHHHHHHHHHhCCCEEEEEeCCCCccc---cc-cc-ccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGG--FIASHIARRLKSEGHYIIASDWKKNEHM---TE-DM-FCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~-~~-~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
++.+.+|||||++ -||+++++.|++.|++|++..|+..... .. .. ....++.+|++|.+.+..+++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 3568899999996 9999999999999999999888642110 00 00 112467899999888776653
Q ss_pred CCCEEEEcccccCCc-------ccccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 GVDHVFNLAADMGGM-------GFIQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+|+..... +....+.+..+.+|+.++..+++++... .-.++|++||.....
T Consensus 85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~------------- 151 (271)
T PRK06505 85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTR------------- 151 (271)
T ss_pred CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccc-------------
Confidence 689999999964310 1222334556788998888877765421 113899999864321
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+......|+.+|...+.+.+.++.+ .++++..+.||.+-.+.... .. ....... ..... .+
T Consensus 152 ----~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~--~~-~~~~~~~-~~~~~--~p------ 215 (271)
T PRK06505 152 ----VMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAG--IG-DARAIFS-YQQRN--SP------ 215 (271)
T ss_pred ----cCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccccccc--Cc-chHHHHH-HHhhc--CC------
Confidence 1112357999999999999998876 46999999999987653110 00 0001111 11111 11
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
...+...+|+|.+++.++... .+..+.+.++.
T Consensus 216 -~~r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG~ 251 (271)
T PRK06505 216 -LRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGY 251 (271)
T ss_pred -ccccCCHHHHHHHHHHHhCccccccCceEEeecCCc
Confidence 123567899999999988653 25556666553
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.8e-13 Score=114.47 Aligned_cols=159 Identities=13% Similarity=0.042 Sum_probs=117.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc---------ccccceeEEecccchhhHhhhcc-------
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE---------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
++++|+||+|+||.++++.|+++|+ .|+++.|++...... ...++.++.+|+++.+.+..+++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999986 688888875432211 11245678899999887776654
Q ss_pred CCCEEEEcccccCCc---ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 90 GVDHVFNLAADMGGM---GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
.+|+|||+++..... .....+.+..++.|+.++..+++++++.+.+++|++||....- +.
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~-----------------~~ 143 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVL-----------------GN 143 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhc-----------------CC
Confidence 469999999864321 1222334567889999999999999888878999999864421 11
Q ss_pred CCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCccc
Q 017290 167 EPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIY 203 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~ 203 (374)
.....|+.+|...+.+++.+. ..+++++.+.|+.+-
T Consensus 144 ~~~~~y~~sk~~~~~~~~~~~-~~~~~~~~~~~g~~~ 179 (180)
T smart00822 144 PGQANYAAANAFLDALAAHRR-ARGLPATSINWGAWA 179 (180)
T ss_pred CCchhhHHHHHHHHHHHHHHH-hcCCceEEEeecccc
Confidence 233579999999999986554 468888988887653
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.7e-13 Score=129.21 Aligned_cols=214 Identities=17% Similarity=0.110 Sum_probs=142.2
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc--c-cccccceeEEecccchhhHhhhcc-------CCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM--T-EDMFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~-~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
...++++||||+|.||.++++.|.++|++|++++++..... . ....+..++.+|+++.+.+..+++ ++|+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 35689999999999999999999999999999988543211 0 011234678899999887776654 5899
Q ss_pred EEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHHhCCC----CeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 94 VFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRISGV----KRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 94 vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~~~~----~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
|||+|+...... ......+..+.+|+.++.++.+++..... .+||++||...+.. .
T Consensus 288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g-----------------~ 350 (450)
T PRK08261 288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAG-----------------N 350 (450)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC-----------------C
Confidence 999999653211 12223455688999999999998876332 58999999755321 1
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
.....|+.+|...+.+++.++.+ .++.+.++.||.+-.+.. ..... ....... .+. ......
T Consensus 351 ~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~-----~~~~~-~~~~~~~---~~~------~l~~~~ 415 (450)
T PRK08261 351 RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMT-----AAIPF-ATREAGR---RMN------SLQQGG 415 (450)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhh-----hccch-hHHHHHh---hcC------CcCCCC
Confidence 23468999999888888887654 478999999998753211 01111 1111110 000 011223
Q ss_pred eHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 244 FIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
...|+++++..++... .+.++.+.++
T Consensus 416 ~p~dva~~~~~l~s~~~~~itG~~i~v~g~ 445 (450)
T PRK08261 416 LPVDVAETIAWLASPASGGVTGNVVRVCGQ 445 (450)
T ss_pred CHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence 4679999999888653 2556666543
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.7e-13 Score=125.83 Aligned_cols=177 Identities=16% Similarity=0.090 Sum_probs=120.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
++++++||||++.||.++++.|+++| ++|++++|+....... ....+.++.+|+++.+.+..+++ +
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 35789999999999999999999999 9999999876432111 11245678899999887766552 5
Q ss_pred CCEEEEcccccCCc----ccccCCcceehhhhHHHHHHHHHHH----HhCC--CCeEEEeecccccCCCc--cccc--cc
Q 017290 91 VDHVFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMLEAS----RISG--VKRFFYASSACIYPEFK--QLET--NV 156 (374)
Q Consensus 91 ~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~a~----~~~~--~~~~i~~Ss~~vy~~~~--~~~~--~~ 156 (374)
+|++||+||..... .......+..+++|+.++..++.++ ++.+ ..++|++||...+.... ..+. +.
T Consensus 82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~ 161 (314)
T TIGR01289 82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL 161 (314)
T ss_pred CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence 89999999964311 1122334556889998877776554 3332 35999999987754210 0000 00
Q ss_pred --------------CCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh----hCCcEEEEeeCccc
Q 017290 157 --------------SLKESDAWPAEPQDAYGLEKLASEELCKHYTKD----FGIECRVGRFHNIY 203 (374)
Q Consensus 157 --------------~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~ 203 (374)
++.+.. +..+...|+.||.....+.+.++.+ .++.++.++||.|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~ 224 (314)
T TIGR01289 162 GDLSGLAAGFKAPIAMIDGK--EFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIA 224 (314)
T ss_pred cccccccccCCCcccccCCC--CcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCccc
Confidence 001111 2335567999999988888777654 36889999999985
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.2e-13 Score=121.81 Aligned_cols=216 Identities=13% Similarity=0.017 Sum_probs=138.2
Q ss_pred CCCeEEEEcC--cchhHHHHHHHHHhCCCEEEEEeCCCCccc---cc--ccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGA--GGFIASHIARRLKSEGHYIIASDWKKNEHM---TE--DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~--~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
..+.++|||| ++-||+++++.|+++|++|++..|...... .. .......+.+|++|.+++..+++ +
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4588999997 679999999999999999998876532111 00 00123568899999988877663 6
Q ss_pred CCEEEEcccccCCc----cc-cc---CCcceehhhhHHHHHHHHHHHHh---CCCCeEEEeecccccCCCcccccccCCC
Q 017290 91 VDHVFNLAADMGGM----GF-IQ---SNHSVIMYNNTMISFNMLEASRI---SGVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 91 ~d~vi~~a~~~~~~----~~-~~---~~~~~~~~~n~~~~~~ll~a~~~---~~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
+|++||+||..... .. .+ ...+..+++|+.+...+.+++.. ....++|++||...+.
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~------------ 152 (261)
T PRK08690 85 LDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR------------ 152 (261)
T ss_pred CcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc------------
Confidence 89999999975321 00 11 12233466788777766665432 1124799999865431
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
+......|+.+|...+.+.+.++.+ .++++..+.||.+-.+.... .. ........ +...
T Consensus 153 -----~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~--~~-~~~~~~~~-~~~~--------- 214 (261)
T PRK08690 153 -----AIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASG--IA-DFGKLLGH-VAAH--------- 214 (261)
T ss_pred -----CCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhc--CC-chHHHHHH-Hhhc---------
Confidence 1123457999999999998887653 57999999999986542110 00 00111111 1111
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.+...+...+|+|++++.++... .+..+.+.++.
T Consensus 215 ~p~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~ 252 (261)
T PRK08690 215 NPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGY 252 (261)
T ss_pred CCCCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCc
Confidence 11224678899999999998754 25556665543
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.7e-13 Score=132.43 Aligned_cols=164 Identities=15% Similarity=0.082 Sum_probs=122.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
+.++++||||++.||.++++.|+++|++|++++|+........ ...+.++.+|+++.+.+..+++ ++|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4688999999999999999999999999999999865432211 1234668899999888776653 58999
Q ss_pred EEcccccCC-----cccccCCcceehhhhHHHHHHHHHHHHh----CCCC-eEEEeecccccCCCcccccccCCCCCCCC
Q 017290 95 FNLAADMGG-----MGFIQSNHSVIMYNNTMISFNMLEASRI----SGVK-RFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 95 i~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~-~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
||+|+.... .+....+.+..+++|+.++..+++++.. .+.. ++|++||......
T Consensus 84 i~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~---------------- 147 (520)
T PRK06484 84 VNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVA---------------- 147 (520)
T ss_pred EECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCC----------------
Confidence 999986321 1122233456788999998888877653 2333 8999999755321
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCC
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGP 205 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~ 205 (374)
......|+.+|...+.+.+.++.+ .+++++.++|+.+-.+
T Consensus 148 -~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~ 190 (520)
T PRK06484 148 -LPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQ 190 (520)
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCch
Confidence 123357999999999999888765 4699999999988654
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=7.3e-13 Score=119.12 Aligned_cols=217 Identities=13% Similarity=-0.042 Sum_probs=142.1
Q ss_pred CCCeEEEEcCc--chhHHHHHHHHHhCCCEEEEEeCCCCcc---ccc-cc-ccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAG--GFIASHIARRLKSEGHYIIASDWKKNEH---MTE-DM-FCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~-~~-~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
.++++|||||+ +-||.++++.|++.|++|+++.|+.... ... .. .....+.+|+++.+.+..+++ +
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 88 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGK 88 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 45899999997 7999999999999999999887753211 001 00 123568899999888877653 5
Q ss_pred CCEEEEcccccCCc-------ccccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCCC
Q 017290 91 VDHVFNLAADMGGM-------GFIQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 91 ~d~vi~~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
+|++||+|+..... +....+.+..+++|+.++..+++++... +-.++|++||.....
T Consensus 89 iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~-------------- 154 (272)
T PRK08159 89 LDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK-------------- 154 (272)
T ss_pred CcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc--------------
Confidence 89999999965310 1122234557889999998888876542 124899999854321
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
+......|+.+|...+.+++.++.+ .++++.++.||.+..+.... ... . ..+...... .. +
T Consensus 155 ---~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~--~~~-~-~~~~~~~~~--~~-------p 218 (272)
T PRK08159 155 ---VMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASG--IGD-F-RYILKWNEY--NA-------P 218 (272)
T ss_pred ---CCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhc--CCc-c-hHHHHHHHh--CC-------c
Confidence 1122357999999999999988765 46999999999886532100 000 0 001110000 01 1
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
...+...+|+|++++.++... .+..+.+.++..
T Consensus 219 ~~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~~ 255 (272)
T PRK08159 219 LRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGYH 255 (272)
T ss_pred ccccCCHHHHHHHHHHHhCccccCccceEEEECCCce
Confidence 123578899999999998754 255666666543
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.7e-13 Score=118.32 Aligned_cols=163 Identities=16% Similarity=0.087 Sum_probs=118.8
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccc-cceeEEecccchhhHhhhc------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMF-CHEFHLVDLRVMDNCLKVT------ 88 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~-~i~~~~~dl~~~~~~~~~~------ 88 (374)
...+|.|+||||+.-||.+++.+|.++|..++.+.|...+.... ... .+.++.+|++|.+++.+++
T Consensus 9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH 88 (282)
T ss_pred HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence 34679999999999999999999999999888887776543221 111 4889999999999888664
Q ss_pred -cCCCEEEEcccccCCcccccC----CcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCC
Q 017290 89 -KGVDHVFNLAADMGGMGFIQS----NHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 89 -~~~d~vi~~a~~~~~~~~~~~----~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
.++|++||+||... ...... +....+++|+.|+..+..++ ++.+-.|+|.+||..-+-
T Consensus 89 fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~------------ 155 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM------------ 155 (282)
T ss_pred cCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc------------
Confidence 38999999999865 222222 22336889999877777665 445534999999976542
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhhhCCcEE----EEeeCccc
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR----VGRFHNIY 203 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~----ilR~~~v~ 203 (374)
+....+.|..||.+.+.+.+.+..+..-..+ ++-||.|-
T Consensus 156 -----~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~ 198 (282)
T KOG1205|consen 156 -----PLPFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIE 198 (282)
T ss_pred -----CCCcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCcee
Confidence 2223358999999999999999887653332 25555554
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.7e-12 Score=116.00 Aligned_cols=215 Identities=13% Similarity=0.019 Sum_probs=138.6
Q ss_pred CCCeEEEEcCcc--hhHHHHHHHHHhCCCEEEEEeCCCCccc---cc--ccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGG--FIASHIARRLKSEGHYIIASDWKKNEHM---TE--DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~--~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
.+++++||||++ -||+++++.|++.|++|++.+|+..... .. .......+.+|++|.+.+..+++ +
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 468899999985 8999999999999999998887632100 00 11134578899999888877663 5
Q ss_pred CCEEEEcccccCCcc--------cccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCC
Q 017290 91 VDHVFNLAADMGGMG--------FIQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~--------~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
+|++||+|+...... ....+.+..+++|+.+...+.+++... .-.++|++||.....
T Consensus 85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~------------- 151 (262)
T PRK07984 85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER------------- 151 (262)
T ss_pred CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC-------------
Confidence 899999999643211 111123345678888877777665431 113799999864321
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+......|+.+|...+.+++.++.+ .++++..+.||.+.-+.... ... ...+.... ... .
T Consensus 152 ----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~--~~~-~~~~~~~~-~~~---------~ 214 (262)
T PRK07984 152 ----AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG--IKD-FRKMLAHC-EAV---------T 214 (262)
T ss_pred ----CCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhc--CCc-hHHHHHHH-HHc---------C
Confidence 1112357999999999999998875 46899999999886431100 000 01111111 100 0
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
+...+...+|++.+++.++... .+..+.+.++
T Consensus 215 p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg 250 (262)
T PRK07984 215 PIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG 250 (262)
T ss_pred CCcCCCCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence 1224678899999999998753 2455666554
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.9e-12 Score=118.94 Aligned_cols=213 Identities=15% Similarity=0.023 Sum_probs=131.6
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc-----ccceeEEecccch-hhHhhhcc----CCC
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM-----FCHEFHLVDLRVM-DNCLKVTK----GVD 92 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~i~~~~~dl~~~-~~~~~~~~----~~d 92 (374)
+..+++|||+||||.+|+-+++.|+++|+.|+++.|+......... .+...+..+.... +.+..+.. ...
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~ 155 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVV 155 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccce
Confidence 3467899999999999999999999999999999998765433321 1233333333322 22222222 334
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCch
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAY 172 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y 172 (374)
+++-|++-.+.. + +....+.+.-.+++++++||+.+|++|++++|+.+.-.... .. +.......+
T Consensus 156 ~v~~~~ggrp~~---e-d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~----------~~-~~~~~~~~~ 220 (411)
T KOG1203|consen 156 IVIKGAGGRPEE---E-DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQ----------PP-NILLLNGLV 220 (411)
T ss_pred eEEecccCCCCc---c-cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCC----------Cc-hhhhhhhhh
Confidence 666666643211 1 23344567889999999999999999999998875532211 00 000112344
Q ss_pred HHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHH
Q 017290 173 GLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV 252 (374)
Q Consensus 173 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i 252 (374)
-.+|+.+|.++++ .+++++|+|++...-....... . ... +.+... ..+..--.+.-.|+|+.+
T Consensus 221 ~~~k~~~e~~~~~----Sgl~ytiIR~g~~~~~~~~~~~------~----~~~-~~~~~~--~~~~~~~~i~r~~vael~ 283 (411)
T KOG1203|consen 221 LKAKLKAEKFLQD----SGLPYTIIRPGGLEQDTGGQRE------V----VVD-DEKELL--TVDGGAYSISRLDVAELV 283 (411)
T ss_pred hHHHHhHHHHHHh----cCCCcEEEeccccccCCCCcce------e----ccc-Cccccc--cccccceeeehhhHHHHH
Confidence 4677777777665 8999999999988765432110 0 000 011111 111111367889999999
Q ss_pred HhhhccCC---CCcEEec
Q 017290 253 LRLTKSDF---REPVNIG 267 (374)
Q Consensus 253 ~~~~~~~~---~~~~~i~ 267 (374)
+.++.++. ..+.+++
T Consensus 284 ~~all~~~~~~~k~~~~v 301 (411)
T KOG1203|consen 284 AKALLNEAATFKKVVELV 301 (411)
T ss_pred HHHHhhhhhccceeEEee
Confidence 99988763 3455544
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.5e-13 Score=121.14 Aligned_cols=204 Identities=15% Similarity=0.058 Sum_probs=132.0
Q ss_pred eEEEEcCcchhHHHHHHHHHh----CCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhccC-----
Q 017290 28 RISVTGAGGFIASHIARRLKS----EGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTKG----- 90 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~~----- 90 (374)
.++||||+|.||.+++++|++ .|++|+++.|+....... ....+.++.+|+++.+.+.++++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 589999999999999999997 699999999986532111 112467788999998877766531
Q ss_pred ------CCEEEEcccccCCcc--cc----cCCcceehhhhHHHHHHHHHHHHh----C-C-CCeEEEeecccccCCCccc
Q 017290 91 ------VDHVFNLAADMGGMG--FI----QSNHSVIMYNNTMISFNMLEASRI----S-G-VKRFFYASSACIYPEFKQL 152 (374)
Q Consensus 91 ------~d~vi~~a~~~~~~~--~~----~~~~~~~~~~n~~~~~~ll~a~~~----~-~-~~~~i~~Ss~~vy~~~~~~ 152 (374)
.|++||+||...... .. ..+.+..+++|+.++..+.+++.. . + ..++|++||...+.
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~----- 156 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ----- 156 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC-----
Confidence 258999999643211 11 123345788999888777665532 2 2 24899999975532
Q ss_pred ccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCc
Q 017290 153 ETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDK 229 (374)
Q Consensus 153 ~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (374)
+......|+.+|...+.+++.++.+ .++.+..+.||.+-.+.. ...... ......
T Consensus 157 ------------~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~---------~~~~~~-~~~~~~ 214 (256)
T TIGR01500 157 ------------PFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQ---------QQVREE-SVDPDM 214 (256)
T ss_pred ------------CCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHH---------HHHHHh-cCChhH
Confidence 1223467999999999999998765 468899999998864421 000000 000000
Q ss_pred eEeeCCCcccccceeHHHHHHHHHhhhcc
Q 017290 230 FEMWGDGLQTRSFTFIDECVEGVLRLTKS 258 (374)
Q Consensus 230 ~~~~~~~~~~~~~i~~~Dva~~i~~~~~~ 258 (374)
...+......-.+...+|+|.+++.++.+
T Consensus 215 ~~~~~~~~~~~~~~~p~eva~~~~~l~~~ 243 (256)
T TIGR01500 215 RKGLQELKAKGKLVDPKVSAQKLLSLLEK 243 (256)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHhc
Confidence 00000001112367889999999998863
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.7e-12 Score=116.02 Aligned_cols=215 Identities=11% Similarity=-0.024 Sum_probs=139.0
Q ss_pred CCCeEEEEcCcc--hhHHHHHHHHHhCCCEEEEEeCCCCcc---cccc-c-ccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGG--FIASHIARRLKSEGHYIIASDWKKNEH---MTED-M-FCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~-~-~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
++|.++||||++ -||.++++.|+++|++|++..|+.... .... . ....++.+|++|.+++..+++ +
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 458899999997 799999999999999999888763210 0010 1 112356899999888776663 5
Q ss_pred CCEEEEcccccCC-------cccccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCCC
Q 017290 91 VDHVFNLAADMGG-------MGFIQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 91 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
+|++||+++.... .+....+....+++|+.+...+++++... .-.++|++||.....
T Consensus 87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~-------------- 152 (260)
T PRK06603 87 FDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK-------------- 152 (260)
T ss_pred ccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc--------------
Confidence 8999999986421 01122234456888998888887765321 113899999864421
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
+......|+.+|...+.+.+.++.+ .++.+..+.||.+-.+.... .. .......... .. . +
T Consensus 153 ---~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~--~~-~~~~~~~~~~-~~--~-------p 216 (260)
T PRK06603 153 ---VIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSA--IG-DFSTMLKSHA-AT--A-------P 216 (260)
T ss_pred ---CCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhc--CC-CcHHHHHHHH-hc--C-------C
Confidence 1112357999999999999988765 46999999999886542110 00 0011111111 01 0 1
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
...+...+|+|++++.++..+ .+..+.+.++
T Consensus 217 ~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG 251 (260)
T PRK06603 217 LKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCG 251 (260)
T ss_pred cCCCCCHHHHHHHHHHHhCcccccCcceEEEeCCc
Confidence 123577899999999998753 2455666544
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.1e-12 Score=116.87 Aligned_cols=215 Identities=14% Similarity=0.058 Sum_probs=138.1
Q ss_pred CCCeEEEEcC--cchhHHHHHHHHHhCCCEEEEEeCCCCcc--ccc---ccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGA--GGFIASHIARRLKSEGHYIIASDWKKNEH--MTE---DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
.+++++|||| ++-||.++++.|++.|++|++++|+.... ... ....+.++.+|+++.+.+..+++ +
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999 89999999999999999999998764211 110 11135688999999888776653 6
Q ss_pred CCEEEEcccccCCc----ccccCC---cceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCCC
Q 017290 91 VDHVFNLAADMGGM----GFIQSN---HSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 91 ~d~vi~~a~~~~~~----~~~~~~---~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
+|++||+||..... ...+.+ ....+++|+.++..++.++... .-.++|++|+....
T Consensus 86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~--------------- 150 (256)
T PRK07889 86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV--------------- 150 (256)
T ss_pred CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc---------------
Confidence 89999999975310 112222 2335788998888777765431 11378888754210
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
.......|+.+|...+.+.+.++.+ .++.+..+.||.+-.+.... .. ..... ...+... .++
T Consensus 151 ---~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~--~~-~~~~~-~~~~~~~--~p~------ 215 (256)
T PRK07889 151 ---AWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKA--IP-GFELL-EEGWDER--APL------ 215 (256)
T ss_pred ---cCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhc--cc-CcHHH-HHHHHhc--Ccc------
Confidence 1112356899999999999888765 46999999999887542110 00 00111 1111100 110
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
.+.+...+|+|++++.++... .+.++.+.++
T Consensus 216 ~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg 250 (256)
T PRK07889 216 GWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGG 250 (256)
T ss_pred ccccCCHHHHHHHHHHHhCcccccccceEEEEcCc
Confidence 113578899999999988754 2455555543
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.3e-12 Score=115.14 Aligned_cols=216 Identities=15% Similarity=-0.009 Sum_probs=139.9
Q ss_pred CCCeEEEEcC--cchhHHHHHHHHHhCCCEEEEEeCCCCccc---cc-cc-ccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGA--GGFIASHIARRLKSEGHYIIASDWKKNEHM---TE-DM-FCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~-~~-~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
+.++++|||| ++-||.++++.|++.|++|+++.|...... .. .. .....+.+|++|.+++.++++ +
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 4588999996 679999999999999999998865422111 00 00 122467899999988877663 6
Q ss_pred CCEEEEcccccCCc--------ccccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCC
Q 017290 91 VDHVFNLAADMGGM--------GFIQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 91 ~d~vi~~a~~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
+|++||+|+..... +....+.+..+++|+.+...+++++... .-.++|++||.....
T Consensus 85 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~------------- 151 (260)
T PRK06997 85 LDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER------------- 151 (260)
T ss_pred CcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc-------------
Confidence 89999999975321 0111234456888999988888776542 124899999865421
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+......|+.+|...+.+.+.++.+ .++++..+.||.+-.+.... .. ........ +... .
T Consensus 152 ----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~--~~-~~~~~~~~-~~~~--~------- 214 (260)
T PRK06997 152 ----VVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASG--IK-DFGKILDF-VESN--A------- 214 (260)
T ss_pred ----CCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcc--cc-chhhHHHH-HHhc--C-------
Confidence 1122356999999999999988765 46999999999886532110 00 00111111 1100 1
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
+...+...+|+++++..++..+ .+.++.+.++.
T Consensus 215 p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~ 251 (260)
T PRK06997 215 PLRRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSGF 251 (260)
T ss_pred cccccCCHHHHHHHHHHHhCccccCcceeEEEEcCCh
Confidence 1123578899999999998754 25566665543
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.1e-12 Score=113.39 Aligned_cols=198 Identities=14% Similarity=0.128 Sum_probs=131.6
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc----c---cccceeEEecccchhhHhhhcc-------CCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE----D---MFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~---~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
|.++||||++-||.++++.|. +|++|++++|+..+.... . ...+.++.+|+.|.+.+..+++ ++|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 679999999999999999998 599999999986543211 0 1135678999999887776543 689
Q ss_pred EEEEcccccCCcccccCC---cceehhhhHHHHHHHH----HHHHhCC-CCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNML----EASRISG-VKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~---~~~~~~~n~~~~~~ll----~a~~~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
++||+|+........+.+ ......+|+.+...++ ..+.+.+ -.++|++||...+.
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~----------------- 142 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR----------------- 142 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc-----------------
Confidence 999999975321111111 1233455666655444 3344432 24899999975431
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
+......|+.+|...+.+.+.++.+ .++.+..+.||.+..+.. ....+. . -
T Consensus 143 ~~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~-----------------~~~~~~-------~--~ 196 (246)
T PRK05599 143 ARRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMT-----------------TGMKPA-------P--M 196 (246)
T ss_pred CCcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhh-----------------cCCCCC-------C--C
Confidence 1123457999999999999888765 368888899998875421 000000 0 0
Q ss_pred ceeHHHHHHHHHhhhccCC-CCcEEecC
Q 017290 242 FTFIDECVEGVLRLTKSDF-REPVNIGS 268 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~~-~~~~~i~~ 268 (374)
....+|+|++++.++.+.. +..+.+..
T Consensus 197 ~~~pe~~a~~~~~~~~~~~~~~~~~~~~ 224 (246)
T PRK05599 197 SVYPRDVAAAVVSAITSSKRSTTLWIPG 224 (246)
T ss_pred CCCHHHHHHHHHHHHhcCCCCceEEeCc
Confidence 2467999999999998864 34455543
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.5e-12 Score=111.20 Aligned_cols=204 Identities=13% Similarity=0.044 Sum_probs=146.3
Q ss_pred CCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc----c-ccceeEEecccchhhHhhhcc-----
Q 017290 20 PYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED----M-FCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 20 ~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
+.-+.++..||||||++-+|+.++.+++++|..+.+.+.++....+.. . ..+..+.+|+++.+++.+..+
T Consensus 32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e 111 (300)
T KOG1201|consen 32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKE 111 (300)
T ss_pred chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHh
Confidence 344557899999999999999999999999999999998876433221 0 146789999999988776653
Q ss_pred --CCCEEEEcccccCCcccccCC---cceehhhhHHHHHHHHHH----HHhCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 --GVDHVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNMLEA----SRISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~~~~~~~---~~~~~~~n~~~~~~ll~a----~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
.+|++|++||..+.....+.+ -+..+++|+.++.....+ +.+..-.|+|.++|...+.
T Consensus 112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~------------- 178 (300)
T KOG1201|consen 112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLF------------- 178 (300)
T ss_pred cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhccc-------------
Confidence 789999999998765544433 355688999887666554 4454445999999976543
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh------hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeC
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD------FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWG 234 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (374)
.......|..||..+.-+.+.+..+ .+++.+.+.|+.+=-. ++.. ..+
T Consensus 179 ----g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg-------------mf~~----~~~----- 232 (300)
T KOG1201|consen 179 ----GPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTG-------------MFDG----ATP----- 232 (300)
T ss_pred ----CCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccc-------------ccCC----CCC-----
Confidence 2234578999999999888887643 3577787777665411 1111 111
Q ss_pred CCcccccceeHHHHHHHHHhhhccCCCCc
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSDFREP 263 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~~~~~ 263 (374)
-...++.+..+-+|+.++.++.......
T Consensus 233 -~~~l~P~L~p~~va~~Iv~ai~~n~~~~ 260 (300)
T KOG1201|consen 233 -FPTLAPLLEPEYVAKRIVEAILTNQAGL 260 (300)
T ss_pred -CccccCCCCHHHHHHHHHHHHHcCCccc
Confidence 1235678899999999999988765443
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.4e-12 Score=108.29 Aligned_cols=210 Identities=18% Similarity=0.162 Sum_probs=148.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc-ccceeEEecccchhhHhhhccCCCEEEEcccccCCcc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM-FCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMG 105 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~ 105 (374)
.+.++.|+.||.|+++.+.....++.|..+.|+..+...... ..+++..+|....+-....+.++..++-+++-.+
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfg--- 129 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFG--- 129 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCcc---
Confidence 578999999999999999999999999999999775443332 2467788888766656666778999999988554
Q ss_pred cccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHH
Q 017290 106 FIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKH 185 (374)
Q Consensus 106 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~ 185 (374)
+...+..+|-....+-+.++.+.|+++|+|+|-... +- . +..| ..|-.+|.++|..+..
T Consensus 130 ----n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~-~~----------~-----~~i~-rGY~~gKR~AE~Ell~ 188 (283)
T KOG4288|consen 130 ----NIILMDRINGTANINAVKAAAKAGVPRFVYISAHDF-GL----------P-----PLIP-RGYIEGKREAEAELLK 188 (283)
T ss_pred ----chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhc-CC----------C-----Cccc-hhhhccchHHHHHHHH
Confidence 334455667777777889999999999999987522 11 0 2233 3799999999998777
Q ss_pred HHhhhCCcEEEEeeCcccCCCCCCCCCCC------cHHHHHHHHh-ccCCceEeeCCCcccccceeHHHHHHHHHhhhcc
Q 017290 186 YTKDFGIECRVGRFHNIYGPFGTWKGMEK------APAAFCRKAL-TSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS 258 (374)
Q Consensus 186 ~~~~~~~~~~ilR~~~v~g~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~ 258 (374)
- ++.+-++||||.+||... ..+... -+..+..+.+ +....+++ -+.-..+.+.+++||.+.+.++++
T Consensus 189 ~---~~~rgiilRPGFiyg~R~-v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~--lg~l~~ppvnve~VA~aal~ai~d 262 (283)
T KOG4288|consen 189 K---FRFRGIILRPGFIYGTRN-VGGIKSPLHTVGEPLEMVLKFALKPLNKLPL--LGPLLAPPVNVESVALAALKAIED 262 (283)
T ss_pred h---cCCCceeeccceeecccc-cCcccccHHhhhhhHHHHHHhhhchhhcCcc--cccccCCCcCHHHHHHHHHHhccC
Confidence 4 457789999999999732 221111 1112222222 11223334 345577899999999999999998
Q ss_pred CC-CCcEEe
Q 017290 259 DF-REPVNI 266 (374)
Q Consensus 259 ~~-~~~~~i 266 (374)
+. .+++.+
T Consensus 263 p~f~Gvv~i 271 (283)
T KOG4288|consen 263 PDFKGVVTI 271 (283)
T ss_pred CCcCceeeH
Confidence 73 455543
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.3e-12 Score=115.88 Aligned_cols=166 Identities=11% Similarity=-0.033 Sum_probs=114.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcc----------ccc----c--cccceeEEecccchhhHhhh
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH----------MTE----D--MFCHEFHLVDLRVMDNCLKV 87 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~----~--~~~i~~~~~dl~~~~~~~~~ 87 (374)
+.+|.++||||++.||.++++.|++.|++|++++|+.... ... . ...+.++.+|+.+.+++..+
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 3568999999999999999999999999999999874311 000 0 11346788999998888766
Q ss_pred cc-------CCCEEEEcc-cccC----Cccccc---CCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccc-cC
Q 017290 88 TK-------GVDHVFNLA-ADMG----GMGFIQ---SNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACI-YP 147 (374)
Q Consensus 88 ~~-------~~d~vi~~a-~~~~----~~~~~~---~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~v-y~ 147 (374)
++ ++|++||+| +... .....+ .+....+++|+.+...++.++. +.+-.++|++||... +.
T Consensus 86 ~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~ 165 (305)
T PRK08303 86 VERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYN 165 (305)
T ss_pred HHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccccc
Confidence 53 689999999 6321 011111 1233456778887777666553 333348999998533 11
Q ss_pred CCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccC
Q 017290 148 EFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYG 204 (374)
Q Consensus 148 ~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g 204 (374)
.. +......|+.+|.....+.+.++.+. ++++..+.||.+-.
T Consensus 166 ~~---------------~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T 210 (305)
T PRK08303 166 AT---------------HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRS 210 (305)
T ss_pred Cc---------------CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCcccc
Confidence 10 11123579999999999998887653 68999999987754
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.39 E-value=2e-12 Score=107.37 Aligned_cols=146 Identities=18% Similarity=0.127 Sum_probs=110.1
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCC--CCccc------ccccccceeEEecccchhhHhhhcc-------C
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG-HYIIASDWK--KNEHM------TEDMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~--~~~~~------~~~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
|.++||||+|-||+++++.|+++| +.|+++.|+ ..... .....++.++.+|+++.+.+..+++ .
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 579999999999999999999994 578888888 11111 1122467889999999888877764 7
Q ss_pred CCEEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
+|++|||++........ .++....+.+|+.+...+.+++...+-.++|++||..... +..
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------------~~~ 143 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVR-----------------GSP 143 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTS-----------------SST
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhcc-----------------CCC
Confidence 89999999986522222 2234557889999999998888774455999999976542 223
Q ss_pred CCCchHHhHHHHHHHHHHHHhh
Q 017290 168 PQDAYGLEKLASEELCKHYTKD 189 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~ 189 (374)
....|..+|...+.+++.++.+
T Consensus 144 ~~~~Y~askaal~~~~~~la~e 165 (167)
T PF00106_consen 144 GMSAYSASKAALRGLTQSLAAE 165 (167)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHh
Confidence 3468999999999999998765
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.9e-12 Score=117.44 Aligned_cols=175 Identities=15% Similarity=0.065 Sum_probs=115.0
Q ss_pred EEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CCCEEE
Q 017290 30 SVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GVDHVF 95 (374)
Q Consensus 30 lItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi 95 (374)
+||||++.||.++++.|+++| ++|+++.|+....... ....+.++.+|+.+.+.+..+++ ++|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 599999999999999999999 9999999876432111 11245678899999888766653 589999
Q ss_pred EcccccCCc----ccccCCcceehhhhHHHHHHHHHHH----HhCC--CCeEEEeecccccCCCc--cccc----cc---
Q 017290 96 NLAADMGGM----GFIQSNHSVIMYNNTMISFNMLEAS----RISG--VKRFFYASSACIYPEFK--QLET----NV--- 156 (374)
Q Consensus 96 ~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~a~----~~~~--~~~~i~~Ss~~vy~~~~--~~~~----~~--- 156 (374)
|+|+..... .....+.+..+++|+.++..+++++ ++.+ ..++|++||...+-... ..+. +.
T Consensus 81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~ 160 (308)
T PLN00015 81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG 160 (308)
T ss_pred ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence 999974211 1122234567889999977776554 3343 35999999976542100 0000 00
Q ss_pred ---CCCCCC------CCCCCCCCchHHhHHHHHHHHHHHHhh----hCCcEEEEeeCcccC
Q 017290 157 ---SLKESD------AWPAEPQDAYGLEKLASEELCKHYTKD----FGIECRVGRFHNIYG 204 (374)
Q Consensus 157 ---~~~e~~------~~~~~~~~~y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~g 204 (374)
+..+.. ..+..+...|+.||...+.+.+.++.+ .++.++++.||.|..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 221 (308)
T PLN00015 161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIAT 221 (308)
T ss_pred hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence 000000 001234467999999977776766654 369999999999953
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.1e-12 Score=104.64 Aligned_cols=165 Identities=12% Similarity=0.067 Sum_probs=123.4
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--ccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--DMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
..+-.||||||+.-||..++++|++.|.+|++..|+..+..+. ..+.+....+|+.|.+..+++++ ..+++
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence 3456899999999999999999999999999999998764432 34467788899999886666653 57999
Q ss_pred EEcccccCCcccccC-----CcceehhhhHHHHHHHHHHHHhC----CCCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 95 FNLAADMGGMGFIQS-----NHSVIMYNNTMISFNMLEASRIS----GVKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 95 i~~a~~~~~~~~~~~-----~~~~~~~~n~~~~~~ll~a~~~~----~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
|+|||+....++... +.++.+.+|+.+...|..+...+ .---+|.+||.-.|. |
T Consensus 83 iNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafv-----------------P 145 (245)
T COG3967 83 INNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFV-----------------P 145 (245)
T ss_pred eecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccC-----------------c
Confidence 999998765544421 12345678888888887766432 223799999977653 3
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCC
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGP 205 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~ 205 (374)
......|..+|+.+..+...+.++ .+++++-+-|+.|--+
T Consensus 146 m~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 146 MASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred ccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 333458999999999987776554 3688888888888654
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.9e-11 Score=106.80 Aligned_cols=162 Identities=10% Similarity=-0.048 Sum_probs=113.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhc-------c-
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVT-------K- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~-------~- 89 (374)
..+++++||||++-||++++++|+++|++|+++.|+.+..... ....+..+.+|+.+.+++..++ .
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4568999999999999999999999999999999987542211 1123456778999988777654 2
Q ss_pred CCCEEEEcccccCCc-ccccCC---cceehhhhHHHHHHHHHH----HHhCC-CCeEEEeecccccCCCcccccccCCCC
Q 017290 90 GVDHVFNLAADMGGM-GFIQSN---HSVIMYNNTMISFNMLEA----SRISG-VKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~-~~~~~~---~~~~~~~n~~~~~~ll~a----~~~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+++..... .+.+.+ ....+..|+.+...++.. .++.+ ...+|++||...+
T Consensus 83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-------------- 148 (227)
T PRK08862 83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-------------- 148 (227)
T ss_pred CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC--------------
Confidence 689999999743211 122222 222445566555544433 33333 3489999985321
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCC
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGP 205 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~ 205 (374)
.....|+.+|...+.+.+.++.+ .++++..+.||.+-..
T Consensus 149 ------~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 149 ------QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred ------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 12357999999999999888765 4799999999988765
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.9e-12 Score=110.78 Aligned_cols=205 Identities=16% Similarity=0.071 Sum_probs=133.3
Q ss_pred HHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc----CCCEEEEcccccCCcccccCCcceehhh
Q 017290 42 IARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK----GVDHVFNLAADMGGMGFIQSNHSVIMYN 117 (374)
Q Consensus 42 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~----~~d~vi~~a~~~~~~~~~~~~~~~~~~~ 117 (374)
+++.|+++|++|++++|+..... ..+++.+|+++.+.+.++++ ++|+|||+||... ..+.+..+++
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~-----~~~~~~~~~v 70 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG-----TAPVELVARV 70 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC-----CCCHHHhhhh
Confidence 46889999999999999865421 13577899999998888775 5899999999642 2356678899
Q ss_pred hHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCCCC----------CCCCCCCCchHHhHHHHHHHHHH
Q 017290 118 NTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKESD----------AWPAEPQDAYGLEKLASEELCKH 185 (374)
Q Consensus 118 n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~----------~~~~~~~~~y~~sK~~~E~~~~~ 185 (374)
|+.++..+++++... ...++|++||...|+.....+...+..+.. ..+......|+.+|...+.+.+.
T Consensus 71 N~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~ 150 (241)
T PRK12428 71 NFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMR 150 (241)
T ss_pred chHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHH
Confidence 999999999887653 224999999998886322111000000000 01233457899999999999888
Q ss_pred HH-h---hhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC--
Q 017290 186 YT-K---DFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-- 259 (374)
Q Consensus 186 ~~-~---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~-- 259 (374)
++ . ..++++.+++||.+.++.... .....-..... ... .....+...+|+|++++.++..+
T Consensus 151 la~~e~~~~girvn~v~PG~v~T~~~~~-----~~~~~~~~~~~--~~~------~~~~~~~~pe~va~~~~~l~s~~~~ 217 (241)
T PRK12428 151 QAQPWFGARGIRVNCVAPGPVFTPILGD-----FRSMLGQERVD--SDA------KRMGRPATADEQAAVLVFLCSDAAR 217 (241)
T ss_pred HHHHhhhccCeEEEEeecCCccCccccc-----chhhhhhHhhh--hcc------cccCCCCCHHHHHHHHHHHcChhhc
Confidence 87 3 357999999999998774210 00000000000 000 01123567899999999988643
Q ss_pred --CCCcEEecCC
Q 017290 260 --FREPVNIGSD 269 (374)
Q Consensus 260 --~~~~~~i~~~ 269 (374)
.+....+.++
T Consensus 218 ~~~G~~i~vdgg 229 (241)
T PRK12428 218 WINGVNLPVDGG 229 (241)
T ss_pred CccCcEEEecCc
Confidence 2444555544
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.4e-11 Score=105.99 Aligned_cols=224 Identities=17% Similarity=0.063 Sum_probs=147.2
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---------cccceeEEecccchhhHhhhc----
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---------MFCHEFHLVDLRVMDNCLKVT---- 88 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~i~~~~~dl~~~~~~~~~~---- 88 (374)
+...+|.++||||+.-||++++++|.+.|.+|++.+|+.+...... ...+..+.+|+.+.++.++++
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV 83 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence 4457899999999999999999999999999999999876522211 223677889999876655443
Q ss_pred ----cCCCEEEEcccccCCc----ccccCCcceehhhhHHH-HHHHHHHHH----hCCCCeEEEeecccccCCCcccccc
Q 017290 89 ----KGVDHVFNLAADMGGM----GFIQSNHSVIMYNNTMI-SFNMLEASR----ISGVKRFFYASSACIYPEFKQLETN 155 (374)
Q Consensus 89 ----~~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~-~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~ 155 (374)
.++|++|++|+..... +.....++..+.+|+.+ ...+..++. +.+-..++++||...+...
T Consensus 84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~------ 157 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPG------ 157 (270)
T ss_pred HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCC------
Confidence 3699999999986532 23344556678899985 555555543 3334478888887554221
Q ss_pred cCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEe
Q 017290 156 VSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEM 232 (374)
Q Consensus 156 ~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (374)
...+ ..|+.+|...+++.+..+.+ .++++.++-||.+..+. ... ............. ..
T Consensus 158 ---------~~~~-~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~-~~~---~~~~~~~~~~~~~----~~ 219 (270)
T KOG0725|consen 158 ---------PGSG-VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL-RAA---GLDDGEMEEFKEA----TD 219 (270)
T ss_pred ---------CCCc-ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc-ccc---ccccchhhHHhhh----hc
Confidence 1112 78999999999999999765 47999999999998774 110 0111111111110 00
Q ss_pred eCCCcccccceeHHHHHHHHHhhhccCC----CCcEEecCC
Q 017290 233 WGDGLQTRSFTFIDECVEGVLRLTKSDF----REPVNIGSD 269 (374)
Q Consensus 233 ~~~~~~~~~~i~~~Dva~~i~~~~~~~~----~~~~~i~~~ 269 (374)
.......-.+...+|+++++..+..... +..+.+.++
T Consensus 220 ~~~~~p~gr~g~~~eva~~~~fla~~~asyitG~~i~vdgG 260 (270)
T KOG0725|consen 220 SKGAVPLGRVGTPEEVAEAAAFLASDDASYITGQTIIVDGG 260 (270)
T ss_pred cccccccCCccCHHHHHHhHHhhcCcccccccCCEEEEeCC
Confidence 0011112246788999999988877653 444444444
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.4e-12 Score=105.75 Aligned_cols=162 Identities=14% Similarity=0.103 Sum_probs=120.2
Q ss_pred CCCeEEEEcCc-chhHHHHHHHHHhCCCEEEEEeCCCCcccccc-cccceeEEecccchhhHhhhcc--------CCCEE
Q 017290 25 EKLRISVTGAG-GFIASHIARRLKSEGHYIIASDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVTK--------GVDHV 94 (374)
Q Consensus 25 ~~~~ilItGat-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~~~--------~~d~v 94 (374)
+.++|||||++ |-||.++++++.++||.|.+..|+-++-.... ..++.....|+++++.+..... +.|++
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 56899999954 99999999999999999999999987655443 4578899999999887766542 57999
Q ss_pred EEcccccCCc---ccccCCcceehhhhHHHHHHHHHHHHhCC---CCeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 95 FNLAADMGGM---GFIQSNHSVIMYNNTMISFNMLEASRISG---VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 95 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~a~~~~~---~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
+++||..... +.....-++.+++|+-|..++.++....- ...+|++.|..+|- |...
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~v-----------------pfpf 148 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVV-----------------PFPF 148 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEe-----------------ccch
Confidence 9999976432 22233456789999988888777765321 12799999987764 3344
Q ss_pred CCchHHhHHHHHHHHHHHHh---hhCCcEEEEeeCccc
Q 017290 169 QDAYGLEKLASEELCKHYTK---DFGIECRVGRFHNIY 203 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~ 203 (374)
.+.|..+|++...+.+-+.- ..|++++.+-+|.|-
T Consensus 149 ~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~ 186 (289)
T KOG1209|consen 149 GSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVA 186 (289)
T ss_pred hhhhhHHHHHHHHhhhhcEEeeeccccEEEEeccccee
Confidence 67899999998888766542 245666666555553
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.1e-11 Score=105.83 Aligned_cols=163 Identities=21% Similarity=0.118 Sum_probs=117.5
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcc-c----cccc----ccceeEEecccc-hhhHhhhcc---
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH-M----TEDM----FCHEFHLVDLRV-MDNCLKVTK--- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~----~~~~----~~i~~~~~dl~~-~~~~~~~~~--- 89 (374)
..++|+||||||++-||.++++.|++.|+.|+++.|..... . .... ..+.+...|+++ .+.+..+++
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 35678999999999999999999999999999888876531 0 0111 235567789997 776665543
Q ss_pred ----CCCEEEEcccccCC----cccccCCcceehhhhHHHHHHHHHHHHhCC-CCeEEEeecccccCCCcccccccCCCC
Q 017290 90 ----GVDHVFNLAADMGG----MGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 ----~~d~vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++|++|+.... .+......+..+.+|+.+...+.+++...- .+++|++||.... ..
T Consensus 82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~----------- 149 (251)
T COG1028 82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GG----------- 149 (251)
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CC-----------
Confidence 58999999997532 122233456678899988877777443221 1289999997653 21
Q ss_pred CCCCCCCC-CCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCccc
Q 017290 161 SDAWPAEP-QDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIY 203 (374)
Q Consensus 161 ~~~~~~~~-~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~ 203 (374)
.+ ...|+.+|...+.+.+.++.+ .|+.+..+.||.+-
T Consensus 150 ------~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 150 ------PPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYID 190 (251)
T ss_pred ------CCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence 11 468999999999998888744 57999999999544
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.8e-10 Score=103.21 Aligned_cols=216 Identities=10% Similarity=-0.065 Sum_probs=133.7
Q ss_pred CCCCCCeEEEEcC--cchhHHHHHHHHHhCCCEEEEEeCCCCcc-------c--c------cc----cccceeEEecc--
Q 017290 22 WPSEKLRISVTGA--GGFIASHIARRLKSEGHYIIASDWKKNEH-------M--T------ED----MFCHEFHLVDL-- 78 (374)
Q Consensus 22 ~~~~~~~ilItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~--~------~~----~~~i~~~~~dl-- 78 (374)
+...+|++||||| +.-||.++++.|.+.|.+|++ .|..... . . .. .....++.+|+
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF 83 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence 3357899999999 799999999999999999988 4431110 0 0 00 00134667787
Q ss_pred cchh------------------hHhhhc-------cCCCEEEEcccccCC-----cccccCCcceehhhhHHHHHHHHHH
Q 017290 79 RVMD------------------NCLKVT-------KGVDHVFNLAADMGG-----MGFIQSNHSVIMYNNTMISFNMLEA 128 (374)
Q Consensus 79 ~~~~------------------~~~~~~-------~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~a 128 (374)
.+.+ ++..++ .++|++||||+.... .+....+....+++|+.+...++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~ 163 (303)
T PLN02730 84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH 163 (303)
T ss_pred CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 3222 344433 268999999964221 1122234566788999998888776
Q ss_pred HHhC--CCCeEEEeecccccCCCcccccccCCCCCCCCCCCC-C-CchHHhHHHHHHHHHHHHhhh----CCcEEEEeeC
Q 017290 129 SRIS--GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP-Q-DAYGLEKLASEELCKHYTKDF----GIECRVGRFH 200 (374)
Q Consensus 129 ~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~-~-~~y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~ 200 (374)
+... .-.++|++||..... + .| . ..|+.+|...+.+.+.++.+. ++++..+-||
T Consensus 164 ~~p~m~~~G~II~isS~a~~~-----------------~-~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG 225 (303)
T PLN02730 164 FGPIMNPGGASISLTYIASER-----------------I-IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAG 225 (303)
T ss_pred HHHHHhcCCEEEEEechhhcC-----------------C-CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeC
Confidence 5432 113899999965421 1 12 2 369999999999999998653 6889999999
Q ss_pred cccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 201 NIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 201 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
.+-.+..... ......... .... . ....+...+|++.+++.++... .+..+.+.++
T Consensus 226 ~v~T~~~~~~---~~~~~~~~~-~~~~--~-------pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG 285 (303)
T PLN02730 226 PLGSRAAKAI---GFIDDMIEY-SYAN--A-------PLQKELTADEVGNAAAFLASPLASAITGATIYVDNG 285 (303)
T ss_pred CccCchhhcc---cccHHHHHH-HHhc--C-------CCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 8865532100 000111111 1100 0 1123567899999999998643 2455655544
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.9e-10 Score=104.16 Aligned_cols=181 Identities=19% Similarity=0.098 Sum_probs=128.9
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc--------cccccceeEEecccchhhHhhhcc----
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT--------EDMFCHEFHLVDLRVMDNCLKVTK---- 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~~i~~~~~dl~~~~~~~~~~~---- 89 (374)
+....+.++||||++-||.+++++|..+|.+|+...|+.+.... .....+.++.+|+.+.+.+.++.+
T Consensus 31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~ 110 (314)
T KOG1208|consen 31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK 110 (314)
T ss_pred ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 44466899999999999999999999999999999999743111 223356779999999888877653
Q ss_pred ---CCCEEEEcccccCCcc-cccCCcceehhhhHHHHHHHHH----HHHhCCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 ---GVDHVFNLAADMGGMG-FIQSNHSVIMYNNTMISFNMLE----ASRISGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 ---~~d~vi~~a~~~~~~~-~~~~~~~~~~~~n~~~~~~ll~----a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
..|++|++||.+.... ...+..+..+.+|..|+..|.+ .++.....|+|++||..- +...... .+..+
T Consensus 111 ~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~---~l~~~ 186 (314)
T KOG1208|consen 111 KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLK---DLSGE 186 (314)
T ss_pred cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchh---hccch
Confidence 6799999999876433 2334568889999988766654 445555469999999654 1111100 11111
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhhh--CCcEEEEeeCcccCCC
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKDF--GIECRVGRFHNIYGPF 206 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~g~~ 206 (374)
..........|+.||.+...+..++.++. |+.+..+.||.+..+.
T Consensus 187 ~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~ 233 (314)
T KOG1208|consen 187 KAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG 233 (314)
T ss_pred hccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence 10002223359999999988888887665 5999999999998774
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.5e-10 Score=92.68 Aligned_cols=211 Identities=16% Similarity=0.080 Sum_probs=138.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc----cc-ccceeEEecccchhhHhhhcc-------CCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE----DM-FCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
+.+.++||||+.-||+++++.|.+.|+.|.+.+++....... .. .+...+.+|+.+..++...++ .++
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps 92 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS 92 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence 557899999999999999999999999999999886532211 11 134568899998776655442 789
Q ss_pred EEEEcccccCC---cccccCCcceehhhhHHHHHHHHHHHHhC----CCC--eEEEeecccc-cCCCcccccccCCCCCC
Q 017290 93 HVFNLAADMGG---MGFIQSNHSVIMYNNTMISFNMLEASRIS----GVK--RFFYASSACI-YPEFKQLETNVSLKESD 162 (374)
Q Consensus 93 ~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~ll~a~~~~----~~~--~~i~~Ss~~v-y~~~~~~~~~~~~~e~~ 162 (374)
++++|||+... ....+.++++.+.+|+.++..+.+++.+. +.+ ++|.+||.-- -|.
T Consensus 93 vlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN-------------- 158 (256)
T KOG1200|consen 93 VLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGN-------------- 158 (256)
T ss_pred EEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccc--------------
Confidence 99999998643 23455667788889999988887766542 222 8999999422 111
Q ss_pred CCCCCCCCchHHhHHHHHHHH----HHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 163 AWPAEPQDAYGLEKLASEELC----KHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~----~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
...+.|..+|.-.--+. ++.+. .++++..+.||.+-.|. ....++..+.... +.-+
T Consensus 159 ----~GQtnYAAsK~GvIgftktaArEla~-knIrvN~VlPGFI~tpM-----T~~mp~~v~~ki~-~~iP--------- 218 (256)
T KOG1200|consen 159 ----FGQTNYAASKGGVIGFTKTAARELAR-KNIRVNVVLPGFIATPM-----TEAMPPKVLDKIL-GMIP--------- 218 (256)
T ss_pred ----ccchhhhhhcCceeeeeHHHHHHHhh-cCceEeEeccccccChh-----hhhcCHHHHHHHH-ccCC---------
Confidence 12234555543322222 22222 38999999999998775 3344555554433 2222
Q ss_pred cccceeHHHHHHHHHhhhccCC----CCcEEecCC
Q 017290 239 TRSFTFIDECVEGVLRLTKSDF----REPVNIGSD 269 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~~----~~~~~i~~~ 269 (374)
...+-..+|+|..++.+..... +..+.++++
T Consensus 219 mgr~G~~EevA~~V~fLAS~~ssYiTG~t~evtGG 253 (256)
T KOG1200|consen 219 MGRLGEAEEVANLVLFLASDASSYITGTTLEVTGG 253 (256)
T ss_pred ccccCCHHHHHHHHHHHhccccccccceeEEEecc
Confidence 2235567999999988874432 455666544
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.7e-11 Score=108.23 Aligned_cols=207 Identities=19% Similarity=0.164 Sum_probs=138.5
Q ss_pred cCc--chhHHHHHHHHHhCCCEEEEEeCCCCccc----cc-ccccceeEEecccchhhHhhhc--------cCCCEEEEc
Q 017290 33 GAG--GFIASHIARRLKSEGHYIIASDWKKNEHM----TE-DMFCHEFHLVDLRVMDNCLKVT--------KGVDHVFNL 97 (374)
Q Consensus 33 Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~-~~~~i~~~~~dl~~~~~~~~~~--------~~~d~vi~~ 97 (374)
|++ +-||+++++.|+++|++|++++|+.++.. .. ...+..++.+|+++.+.+..++ .++|++||+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 566 99999999999999999999999987521 11 1123457999999988777664 468999999
Q ss_pred ccccCC----ccccc---CCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 98 AADMGG----MGFIQ---SNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 98 a~~~~~----~~~~~---~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
++.... ..+.+ .+....+++|+.+...+++++...- -.++|++||..... +...
T Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~-----------------~~~~ 143 (241)
T PF13561_consen 81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQR-----------------PMPG 143 (241)
T ss_dssp EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTS-----------------BSTT
T ss_pred ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcc-----------------cCcc
Confidence 987643 11112 2344567788888888877764311 13799999875432 1223
Q ss_pred CCchHHhHHHHHHHHHHHHhh----hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccccee
Q 017290 169 QDAYGLEKLASEELCKHYTKD----FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
...|+.+|...+.+++.++.+ .++++..+.||.+..+.... ......+...... ..+...+..
T Consensus 144 ~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~---~~~~~~~~~~~~~----------~~pl~r~~~ 210 (241)
T PF13561_consen 144 YSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTER---IPGNEEFLEELKK----------RIPLGRLGT 210 (241)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHH---HHTHHHHHHHHHH----------HSTTSSHBE
T ss_pred chhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhc---cccccchhhhhhh----------hhccCCCcC
Confidence 358999999999999888643 57899999999988542100 0001112222111 112234678
Q ss_pred HHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 245 IDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
.+|+|.++..++... .+.++.+.+|
T Consensus 211 ~~evA~~v~fL~s~~a~~itG~~i~vDGG 239 (241)
T PF13561_consen 211 PEEVANAVLFLASDAASYITGQVIPVDGG 239 (241)
T ss_dssp HHHHHHHHHHHHSGGGTTGTSEEEEESTT
T ss_pred HHHHHHHHHHHhCccccCccCCeEEECCC
Confidence 999999999998765 2566666654
|
... |
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.7e-10 Score=95.01 Aligned_cols=156 Identities=15% Similarity=0.117 Sum_probs=106.3
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc---------ccccceeEEecccchhhHhhhcc-------C
Q 017290 28 RISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE---------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
.++||||+|-||..+++.|.+++. +|+++.|++...... ....+.++.+|++|.+++.+++. .
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 589999999999999999999974 899999984221111 12357888999999999988874 4
Q ss_pred CCEEEEcccccCCcccccCC---cceehhhhHHHHHHHHHHHHhCCCCeEEEeecccc-cCCCcccccccCCCCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNMLEASRISGVKRFFYASSACI-YPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~~~---~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~v-y~~~~~~~~~~~~~e~~~~~~ 166 (374)
++.|||+|+..........+ ....+..-+.++.+|.++.....++.||.+||... +|.
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~------------------ 143 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGG------------------ 143 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-------------------
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccC------------------
Confidence 58899999975432222222 33346667788999999998888899999999654 433
Q ss_pred CCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcc
Q 017290 167 EPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNI 202 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v 202 (374)
.....|..+-...+.+++.... .+.+++++..+..
T Consensus 144 ~gq~~YaaAN~~lda~a~~~~~-~g~~~~sI~wg~W 178 (181)
T PF08659_consen 144 PGQSAYAAANAFLDALARQRRS-RGLPAVSINWGAW 178 (181)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHH-TTSEEEEEEE-EB
T ss_pred cchHhHHHHHHHHHHHHHHHHh-CCCCEEEEEcccc
Confidence 2346899999999888877654 5888888876643
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.1e-09 Score=99.58 Aligned_cols=176 Identities=15% Similarity=0.106 Sum_probs=120.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCccc--ccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHM--TEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
++|+||+|+|++|.||+.++..|...+ .++..+++...... +...........+.++..++.+.++++|+||+++|
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG 85 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAG 85 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCC
Confidence 467899999999999999999998655 68999998322211 11111112334455555555678899999999999
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHH
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAS 179 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~ 179 (374)
.... ...+..+.+..|+..+.++++++++++++++|+++|--+-....-.. ..+.+.+ ...|...||.+-+..
T Consensus 86 ~~~~---~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~--~~~~~~s--g~p~~~viG~g~LDs 158 (321)
T PTZ00325 86 VPRK---PGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAA--ETLKKAG--VYDPRKLFGVTTLDV 158 (321)
T ss_pred CCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHH--hhhhhcc--CCChhheeechhHHH
Confidence 6431 12345667889999999999999999999999999965533221000 0011222 455667788775555
Q ss_pred HHHHHHHHhhhCCcEEEEeeCcccCCCC
Q 017290 180 EELCKHYTKDFGIECRVGRFHNIYGPFG 207 (374)
Q Consensus 180 E~~~~~~~~~~~~~~~ilR~~~v~g~~~ 207 (374)
-++-...++..+++...++ +.|+|.++
T Consensus 159 ~R~r~~la~~l~v~~~~V~-~~VlGeHG 185 (321)
T PTZ00325 159 VRARKFVAEALGMNPYDVN-VPVVGGHS 185 (321)
T ss_pred HHHHHHHHHHhCcChhheE-EEEEeecC
Confidence 5665666777788888887 88999875
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.9e-09 Score=89.97 Aligned_cols=166 Identities=14% Similarity=0.061 Sum_probs=112.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCC-CCcccc------cccccceeEEecccchhhHhhhc--------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSE-GHYIIASDWK-KNEHMT------EDMFCHEFHLVDLRVMDNCLKVT-------- 88 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~-~~~~~~------~~~~~i~~~~~dl~~~~~~~~~~-------- 88 (374)
.++.|+||||..-||.-|+++|++. |-++++.+++ ++.... ....+++++..|+++.+.+..+.
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg 81 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG 81 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence 4577999999999999999999986 6666665554 443111 12447899999999877665554
Q ss_pred -cCCCEEEEcccccCCcccccCC----cceehhhhHHHHHHHHHHH----HhCCCC-----------eEEEeecccccCC
Q 017290 89 -KGVDHVFNLAADMGGMGFIQSN----HSVIMYNNTMISFNMLEAS----RISGVK-----------RFFYASSACIYPE 148 (374)
Q Consensus 89 -~~~d~vi~~a~~~~~~~~~~~~----~~~~~~~n~~~~~~ll~a~----~~~~~~-----------~~i~~Ss~~vy~~ 148 (374)
++.+++|++||....+..-... ....+++|..+...+.+++ ++...+ .+|++||.+.--.
T Consensus 82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~ 161 (249)
T KOG1611|consen 82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG 161 (249)
T ss_pred cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence 3789999999986533221111 2335778887765555443 332222 6898999655311
Q ss_pred CcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccC
Q 017290 149 FKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYG 204 (374)
Q Consensus 149 ~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g 204 (374)
. ....+...|+.||.+.-.+.+..+-+. ++-++.+.||+|--
T Consensus 162 -~-------------~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~T 206 (249)
T KOG1611|consen 162 -G-------------FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQT 206 (249)
T ss_pred -C-------------CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEc
Confidence 0 134566899999999999998886543 46677788888853
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.9e-10 Score=93.47 Aligned_cols=210 Identities=13% Similarity=0.044 Sum_probs=138.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
..++++++|||.|-||..+.++|+++|..+.++..+.+.... .....+.++.+|+++..++++.++
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg 82 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG 82 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence 357999999999999999999999999888877766543221 133467889999999888888775
Q ss_pred CCCEEEEcccccCCcccccCCcceehhhhHHH----HHHHHHHHHh-CC--CCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI----SFNMLEASRI-SG--VKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~----~~~ll~a~~~-~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
.+|++|+.||... +.+.+..+.+|+.+ +...+.+..+ .| -.-+|..||..-+.
T Consensus 83 ~iDIlINgAGi~~-----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~--------------- 142 (261)
T KOG4169|consen 83 TIDILINGAGILD-----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLD--------------- 142 (261)
T ss_pred ceEEEEccccccc-----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccC---------------
Confidence 6799999999753 45667777778755 4555555543 22 22689999964321
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHH-----hhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCC--
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYT-----KDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD-- 235 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~-----~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 235 (374)
|..-...|+.||.-+-.+.++.+ .++|+.+..++||..--. ++..+-.++..+.. .+
T Consensus 143 --P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~-------------l~~~~~~~~~~~e~-~~~~ 206 (261)
T KOG4169|consen 143 --PMPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTD-------------LAENIDASGGYLEY-SDSI 206 (261)
T ss_pred --ccccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHH-------------HHHHHHhcCCcccc-cHHH
Confidence 22334679999988777766633 446899999988866421 11111111111110 00
Q ss_pred --CcccccceeHHHHHHHHHhhhccCC-CCcEEecCC
Q 017290 236 --GLQTRSFTFIDECVEGVLRLTKSDF-REPVNIGSD 269 (374)
Q Consensus 236 --~~~~~~~i~~~Dva~~i~~~~~~~~-~~~~~i~~~ 269 (374)
.-...+--...++++.++.+++.+. +.+|.++.+
T Consensus 207 ~~~l~~~~~q~~~~~a~~~v~aiE~~~NGaiw~v~~g 243 (261)
T KOG4169|consen 207 KEALERAPKQSPACCAINIVNAIEYPKNGAIWKVDSG 243 (261)
T ss_pred HHHHHHcccCCHHHHHHHHHHHHhhccCCcEEEEecC
Confidence 0001123456788999999999874 566766654
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.2e-09 Score=97.69 Aligned_cols=174 Identities=14% Similarity=0.078 Sum_probs=120.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCccc--ccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHM--TEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
...||+|+|++|.||+.++..|...+ .++..++.++.... +...........++.+.+++.+.++++|+|||+||.
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~ 96 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGV 96 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCC
Confidence 45799999999999999999998766 48999998772111 111001122333444455677889999999999997
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHH
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASE 180 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E 180 (374)
... ......+....|...++++.+.+++++.+.+|+++|--+=+...-. . ..+...+ ...|...||.+++..+
T Consensus 97 ~~~---~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~-t-~~~~~~s--~~p~~~viG~~~LDs~ 169 (323)
T PLN00106 97 PRK---PGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIA-A-EVLKKAG--VYDPKKLFGVTTLDVV 169 (323)
T ss_pred CCC---CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHH-H-HHHHHcC--CCCcceEEEEecchHH
Confidence 532 2235567788999999999999999998888888884221000000 0 0011222 4567789999999999
Q ss_pred HHHHHHHhhhCCcEEEEeeCcccCCC
Q 017290 181 ELCKHYTKDFGIECRVGRFHNIYGPF 206 (374)
Q Consensus 181 ~~~~~~~~~~~~~~~ilR~~~v~g~~ 206 (374)
++-..+++..+++...+. +.|+|.+
T Consensus 170 Rl~~~lA~~lgv~~~~V~-~~ViGeH 194 (323)
T PLN00106 170 RANTFVAEKKGLDPADVD-VPVVGGH 194 (323)
T ss_pred HHHHHHHHHhCCChhheE-EEEEEeC
Confidence 999999999998888874 5577765
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.9e-09 Score=92.74 Aligned_cols=167 Identities=14% Similarity=0.168 Sum_probs=122.1
Q ss_pred cCCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc----cccccceeEEecccchhhHhhhcc----
Q 017290 18 REPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT----EDMFCHEFHLVDLRVMDNCLKVTK---- 89 (374)
Q Consensus 18 ~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~i~~~~~dl~~~~~~~~~~~---- 89 (374)
+...-+.+.+-|||||.-.-.|+.+++.|.++|+.|.+-.-.++.... ........+..|+++++.+.++.+
T Consensus 21 ~~~~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~ 100 (322)
T KOG1610|consen 21 RQVLDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKK 100 (322)
T ss_pred hhcccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHH
Confidence 333445567889999999999999999999999999887644332111 114456788999999998887764
Q ss_pred -----CCCEEEEcccccCCc---cccc-CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCccccccc
Q 017290 90 -----GVDHVFNLAADMGGM---GFIQ-SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNV 156 (374)
Q Consensus 90 -----~~d~vi~~a~~~~~~---~~~~-~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~ 156 (374)
+.-.|||+||+.... +|.. .+.....++|+.|+..+..+. +++. .|+|++||.+- . .
T Consensus 101 ~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~G--R-~------ 170 (322)
T KOG1610|consen 101 HLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLG--R-V------ 170 (322)
T ss_pred hcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEeccccc--C-c------
Confidence 557899999966432 2222 245667889999977776654 4443 39999999643 1 0
Q ss_pred CCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCccc
Q 017290 157 SLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIY 203 (374)
Q Consensus 157 ~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~ 203 (374)
+.....+|..||...|.+......+ +|+.+.++-|| +|
T Consensus 171 --------~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG-~f 211 (322)
T KOG1610|consen 171 --------ALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG-FF 211 (322)
T ss_pred --------cCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC-cc
Confidence 3335689999999999998777654 68999999999 44
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.9e-09 Score=96.56 Aligned_cols=216 Identities=10% Similarity=-0.050 Sum_probs=127.8
Q ss_pred CCCCeEEEEcCc--chhHHHHHHHHHhCCCEEEEEeCCC---------Ccc-cc-----cccc-----cceeEEecccch
Q 017290 24 SEKLRISVTGAG--GFIASHIARRLKSEGHYIIASDWKK---------NEH-MT-----EDMF-----CHEFHLVDLRVM 81 (374)
Q Consensus 24 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~V~~~~r~~---------~~~-~~-----~~~~-----~i~~~~~dl~~~ 81 (374)
..+|.++||||+ .-||+++++.|.++|++|++.++.+ +.. .. .... .+..+..|+.+.
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~ 85 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTP 85 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCC
Confidence 367899999995 8999999999999999999876432 000 00 0000 001112233222
Q ss_pred h------------------hHhhh-------ccCCCEEEEcccccCC--c---ccccCCcceehhhhHHHHHHHHHHHHh
Q 017290 82 D------------------NCLKV-------TKGVDHVFNLAADMGG--M---GFIQSNHSVIMYNNTMISFNMLEASRI 131 (374)
Q Consensus 82 ~------------------~~~~~-------~~~~d~vi~~a~~~~~--~---~~~~~~~~~~~~~n~~~~~~ll~a~~~ 131 (374)
+ ++..+ +.++|++||+|+.... . +....+....+++|+.+...+++++..
T Consensus 86 ~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p 165 (299)
T PRK06300 86 EDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGP 165 (299)
T ss_pred EEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 2 12222 2368999999975321 1 122233455678999998888877654
Q ss_pred C--CCCeEEEeecccccCCCcccccccCCCCCCCCCCCCC-CchHHhHHHHHHHHHHHHhh----hCCcEEEEeeCcccC
Q 017290 132 S--GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ-DAYGLEKLASEELCKHYTKD----FGIECRVGRFHNIYG 204 (374)
Q Consensus 132 ~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~-~~y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~g 204 (374)
. .-.++|++||....- +.... ..|+.+|...+.+.+.++.+ .|+++..+.||.+-.
T Consensus 166 ~m~~~G~ii~iss~~~~~-----------------~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T 228 (299)
T PRK06300 166 IMNPGGSTISLTYLASMR-----------------AVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLAS 228 (299)
T ss_pred HhhcCCeEEEEeehhhcC-----------------cCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccC
Confidence 2 113788888754321 11111 36999999999999988765 378999999998865
Q ss_pred CCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 205 PFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
+.... .......... .... .+ ...+...+|++.++..++... .+.++.+.++
T Consensus 229 ~~~~~---~~~~~~~~~~-~~~~--~p-------~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG 284 (299)
T PRK06300 229 RAGKA---IGFIERMVDY-YQDW--AP-------LPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHG 284 (299)
T ss_pred hhhhc---ccccHHHHHH-HHhc--CC-------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 42110 0000111111 1111 11 123567899999999887653 2555666544
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.9e-09 Score=118.90 Aligned_cols=164 Identities=11% Similarity=0.019 Sum_probs=123.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCCCCcc----------------------------------------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSE-GHYIIASDWKKNEH---------------------------------------- 63 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~---------------------------------------- 63 (374)
+++.+|||||++-||..++++|+++ |.+|++++|++...
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 5689999999999999999999998 69999999982100
Q ss_pred ----cc---------cccccceeEEecccchhhHhhhcc------CCCEEEEcccccCCcc---cccCCcceehhhhHHH
Q 017290 64 ----MT---------EDMFCHEFHLVDLRVMDNCLKVTK------GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMI 121 (374)
Q Consensus 64 ----~~---------~~~~~i~~~~~dl~~~~~~~~~~~------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~ 121 (374)
.+ .....+.++.+|++|.+.+..+++ ++|.|||+||...... ....+....+++|+.+
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 00 001135788999999988877764 5899999999754221 2223455679999999
Q ss_pred HHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh-CCcEEEEeeC
Q 017290 122 SFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF-GIECRVGRFH 200 (374)
Q Consensus 122 ~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~ 200 (374)
+.+++.++.....+++|++||...+-. ......|+.+|.....+.+.++.+. ++++..+.+|
T Consensus 2156 ~~~Ll~al~~~~~~~IV~~SSvag~~G-----------------~~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG 2218 (2582)
T TIGR02813 2156 LLSLLAALNAENIKLLALFSSAAGFYG-----------------NTGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWG 2218 (2582)
T ss_pred HHHHHHHHHHhCCCeEEEEechhhcCC-----------------CCCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECC
Confidence 999999998777778999999655321 1234579999999988888887664 5788889888
Q ss_pred cccCC
Q 017290 201 NIYGP 205 (374)
Q Consensus 201 ~v~g~ 205 (374)
.+-+.
T Consensus 2219 ~wdtg 2223 (2582)
T TIGR02813 2219 PWDGG 2223 (2582)
T ss_pred eecCC
Confidence 77654
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.3e-09 Score=87.03 Aligned_cols=205 Identities=20% Similarity=0.163 Sum_probs=143.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc--c-cceeEEecccchhhHhhhcc---CCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM--F-CHEFHLVDLRVMDNCLKVTK---GVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~-~i~~~~~dl~~~~~~~~~~~---~~d~vi~~a 98 (374)
.++.|++||+.--||+.++..|.+.|..|+++.|++......-. + -+..+.+|+.+-+.+.+++- .+|-++++|
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNA 85 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNNA 85 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhccc
Confidence 56889999999999999999999999999999999876443321 1 26788999999888888775 569999999
Q ss_pred cccCCc---ccccCCcceehhhhHHHHHHHHHHHHh----CCCC-eEEEeecccccCCCcccccccCCCCCCCCCCCCCC
Q 017290 99 ADMGGM---GFIQSNHSVIMYNNTMISFNMLEASRI----SGVK-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170 (374)
Q Consensus 99 ~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~-~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~ 170 (374)
+..... +..+.+.+..+.+|+.+...+.+...+ .+++ .+|.+||.+.-- +..-.+
T Consensus 86 gvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R-----------------~~~nHt 148 (245)
T KOG1207|consen 86 GVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIR-----------------PLDNHT 148 (245)
T ss_pred hhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccc-----------------ccCCce
Confidence 975422 234456677889999888777776433 3333 699999965421 333446
Q ss_pred chHHhHHHHHHHHHHHHhhhC---CcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHH
Q 017290 171 AYGLEKLASEELCKHYTKDFG---IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247 (374)
Q Consensus 171 ~y~~sK~~~E~~~~~~~~~~~---~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 247 (374)
.|..+|.......+.++-+.| +++..+-|..|+-..+..+-.+..- .-++ -+.-+.-.|.-++.
T Consensus 149 vYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K------------~k~m-L~riPl~rFaEV~e 215 (245)
T KOG1207|consen 149 VYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDK------------KKKM-LDRIPLKRFAEVDE 215 (245)
T ss_pred EEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchh------------ccch-hhhCchhhhhHHHH
Confidence 899999999888888876655 7777788888765432111000000 0001 11122345788899
Q ss_pred HHHHHHhhhccC
Q 017290 248 CVEGVLRLTKSD 259 (374)
Q Consensus 248 va~~i~~~~~~~ 259 (374)
++.++..++...
T Consensus 216 VVnA~lfLLSd~ 227 (245)
T KOG1207|consen 216 VVNAVLFLLSDN 227 (245)
T ss_pred HHhhheeeeecC
Confidence 999999888764
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.6e-08 Score=88.79 Aligned_cols=201 Identities=17% Similarity=0.135 Sum_probs=130.6
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhcc-------CC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
.+|+||||+.-||..++.++..+|++|+++.|+..+..+. ....+.+..+|+.|.+.+...++ .+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 6899999999999999999999999999999998753322 11235678899988887776664 57
Q ss_pred CEEEEcccccCCcccccC---CcceehhhhHHHHHHHHHHHHhC-C----CCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEASRIS-G----VKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~~---~~~~~~~~n~~~~~~ll~a~~~~-~----~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
|.+|+|||..-...+.+. ..+...++|..++.+++.++... . ..+++++||...--
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~---------------- 177 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML---------------- 177 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc----------------
Confidence 999999996432112222 23445778888998888765331 1 22788888854311
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
+....+.|..+|.....+.....++ +++.++..-|+.+-.|+-...+ ........+... .-
T Consensus 178 -~i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En------------~tkP~~t~ii~g---~s 241 (331)
T KOG1210|consen 178 -GIYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFEREN------------KTKPEETKIIEG---GS 241 (331)
T ss_pred -CcccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccccc------------ccCchheeeecC---CC
Confidence 2233455666666665555554433 4788887777777776533221 011111122221 22
Q ss_pred cceeHHHHHHHHHhhhccC
Q 017290 241 SFTFIDECVEGVLRLTKSD 259 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~ 259 (374)
+.+..+++|.+++.=+.+.
T Consensus 242 s~~~~e~~a~~~~~~~~rg 260 (331)
T KOG1210|consen 242 SVIKCEEMAKAIVKGMKRG 260 (331)
T ss_pred CCcCHHHHHHHHHhHHhhc
Confidence 3478899999998876654
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.7e-09 Score=90.11 Aligned_cols=97 Identities=12% Similarity=0.039 Sum_probs=74.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
|+++||||+|++|. +++.|.+.|++|++++|++...... ....+..+.+|+.|.+++..+++ ++|.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 68999999998876 9999999999999999876432211 11246678899999988887764 45666
Q ss_pred EEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC----eEEEeecc
Q 017290 95 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK----RFFYASSA 143 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~----~~i~~Ss~ 143 (374)
|+.. ...++.++..+|++.+++ +|+++=+.
T Consensus 80 v~~v-------------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~gs 113 (177)
T PRK08309 80 VAWI-------------------HSSAKDALSVVCRELDGSSETYRLFHVLGS 113 (177)
T ss_pred EEec-------------------cccchhhHHHHHHHHccCCCCceEEEEeCC
Confidence 6665 344578999999999988 88887544
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.2e-08 Score=82.96 Aligned_cols=81 Identities=20% Similarity=0.108 Sum_probs=62.2
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhc-------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVT------- 88 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~------- 88 (374)
+...++.++||||+|.||..+++.|.+.|++|++++|+....... ......++.+|+++.+++.+++
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~ 91 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF 91 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 334678999999999999999999999999999999875432110 0123456789999888776644
Q ss_pred cCCCEEEEcccccC
Q 017290 89 KGVDHVFNLAADMG 102 (374)
Q Consensus 89 ~~~d~vi~~a~~~~ 102 (374)
.++|++||+||...
T Consensus 92 G~iDilVnnAG~~~ 105 (169)
T PRK06720 92 SRIDMLFQNAGLYK 105 (169)
T ss_pred CCCCEEEECCCcCC
Confidence 36899999999754
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.1e-08 Score=94.16 Aligned_cols=95 Identities=26% Similarity=0.277 Sum_probs=79.2
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
||+|||.|+ |.||+.++..|+++| ++|++.+|+..+..... ..+++....|..|.+.+.+++++.|+||+++.++
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF 79 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence 689999997 999999999999998 99999999976533322 2268899999999999999999999999999854
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEee
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~S 141 (374)
. ...++++|.+.|+ ++|=+|
T Consensus 80 ~-------------------~~~i~ka~i~~gv-~yvDts 99 (389)
T COG1748 80 V-------------------DLTILKACIKTGV-DYVDTS 99 (389)
T ss_pred h-------------------hHHHHHHHHHhCC-CEEEcc
Confidence 2 2478999999998 666443
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.75 E-value=7.1e-08 Score=84.85 Aligned_cols=164 Identities=14% Similarity=0.043 Sum_probs=114.2
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-------cccceeEEecccchhh----Hhhhcc--CCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-------MFCHEFHLVDLRVMDN----CLKVTK--GVD 92 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~i~~~~~dl~~~~~----~~~~~~--~~d 92 (374)
+.-..|||||.-||++.+++|.++|++|..++|..++..... ...+.++..|.++.+. +.+.+. .+.
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg 128 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVG 128 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence 467899999999999999999999999999999987643221 1246778889887664 445554 567
Q ss_pred EEEEcccccCCcc-----cccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 93 HVFNLAADMGGMG-----FIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 93 ~vi~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
++|+|+|...... ..+........+|+.++..+.+.. .+.+..-+|++||..-.-
T Consensus 129 ILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~---------------- 192 (312)
T KOG1014|consen 129 ILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLI---------------- 192 (312)
T ss_pred EEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccc----------------
Confidence 9999999765221 111123456777887766655544 233333799999964321
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCC
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPF 206 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~ 206 (374)
|..-.+.|..+|...+.+.+.+.+++ |+.+-.+-|..|-.+.
T Consensus 193 -p~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm 237 (312)
T KOG1014|consen 193 -PTPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKM 237 (312)
T ss_pred -cChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence 22335789999998888877776554 6777777777776653
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.74 E-value=9e-08 Score=84.23 Aligned_cols=92 Identities=12% Similarity=0.070 Sum_probs=73.6
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccCCc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMGGM 104 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~~~ 104 (374)
|+|||+||||. |+.+++.|.+.||+|++..+...........+...+..+..+.+.+...++ ++|+||+++.++
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPf--- 76 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHPF--- 76 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHH---
Confidence 68999999999 999999999999999999998865444433333445566667777877775 699999999864
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCC
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVK 135 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~ 135 (374)
-...+.++.++|++.+++
T Consensus 77 -------------A~~is~~a~~a~~~~~ip 94 (256)
T TIGR00715 77 -------------AAQITTNATAVCKELGIP 94 (256)
T ss_pred -------------HHHHHHHHHHHHHHhCCc
Confidence 345678999999999986
|
This enzyme was found to be a monomer by gel filtration. |
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.1e-08 Score=78.32 Aligned_cols=212 Identities=14% Similarity=0.075 Sum_probs=141.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
..-..|||||..-+|...++.|.++|..|..++...++..+. ...++.+...|++..+++..++. +.|..
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~ 87 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL 87 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence 455678999999999999999999999999999876653322 22356778899999888887764 67999
Q ss_pred EEcccccCCccccc---------CCcceehhhhHHHHHHHHHHHHh--------CCCC--eEEEeecccccCCCcccccc
Q 017290 95 FNLAADMGGMGFIQ---------SNHSVIMYNNTMISFNMLEASRI--------SGVK--RFFYASSACIYPEFKQLETN 155 (374)
Q Consensus 95 i~~a~~~~~~~~~~---------~~~~~~~~~n~~~~~~ll~a~~~--------~~~~--~~i~~Ss~~vy~~~~~~~~~ 155 (374)
++||++......+. .+....+++|+.++.++++.... .+-+ .+|...|...|....
T Consensus 88 vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~----- 162 (260)
T KOG1199|consen 88 VNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQT----- 162 (260)
T ss_pred eeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCcc-----
Confidence 99999764332222 23445678999999999875431 1122 467777777765443
Q ss_pred cCCCCCCCCCCCCCCchHHhHHHHHH----HHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceE
Q 017290 156 VSLKESDAWPAEPQDAYGLEKLASEE----LCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFE 231 (374)
Q Consensus 156 ~~~~e~~~~~~~~~~~y~~sK~~~E~----~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (374)
....|..||..+-- +.++++. .|+++..+-||.+--| ....++.-...++... ++
T Consensus 163 ------------gqaaysaskgaivgmtlpiardla~-~gir~~tiapglf~tp------llsslpekv~~fla~~--ip 221 (260)
T KOG1199|consen 163 ------------GQAAYSASKGAIVGMTLPIARDLAG-DGIRFNTIAPGLFDTP------LLSSLPEKVKSFLAQL--IP 221 (260)
T ss_pred ------------chhhhhcccCceEeeechhhhhccc-CceEEEeecccccCCh------hhhhhhHHHHHHHHHh--CC
Confidence 23466677654433 3455554 3789998988876544 2334445555555432 22
Q ss_pred eeCCCcccccceeHHHHHHHHHhhhccC--CCCcEEecC
Q 017290 232 MWGDGLQTRSFTFIDECVEGVLRLTKSD--FREPVNIGS 268 (374)
Q Consensus 232 ~~~~~~~~~~~i~~~Dva~~i~~~~~~~--~~~~~~i~~ 268 (374)
.+ -.+-|....+..+-.+++++ .++++-+.+
T Consensus 222 fp------srlg~p~eyahlvqaiienp~lngevir~dg 254 (260)
T KOG1199|consen 222 FP------SRLGHPHEYAHLVQAIIENPYLNGEVIRFDG 254 (260)
T ss_pred Cc------hhcCChHHHHHHHHHHHhCcccCCeEEEecc
Confidence 21 13557788888888899998 366655543
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.66 E-value=2e-07 Score=85.42 Aligned_cols=168 Identities=14% Similarity=0.070 Sum_probs=101.6
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCC-------CEEEEEeCCCCccc-ccccccce----eEEecccchhhHhhhccCCCE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEG-------HYIIASDWKKNEHM-TEDMFCHE----FHLVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~-~~~~~~i~----~~~~dl~~~~~~~~~~~~~d~ 93 (374)
+.||+||||+|++|++++..|+..+ .+|+++++++.... ......+. ....|+.....+.+.++++|+
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi 81 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDV 81 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCE
Confidence 4689999999999999999998854 58999999764211 11000000 112344344566778899999
Q ss_pred EEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CC-eEEEeeccc---ccCCCcccccccCCCCCCCCCCCC
Q 017290 94 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VK-RFFYASSAC---IYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 94 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~-~~i~~Ss~~---vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
|||+|+.... ...+..+.+..|+...+.+.....++. .+ .+|.+|... .| -+.+... ...+
T Consensus 82 VI~tAG~~~~---~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~----------~~~k~~~-~~~~ 147 (325)
T cd01336 82 AILVGAMPRK---EGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNAL----------ILLKYAP-SIPK 147 (325)
T ss_pred EEEeCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHH----------HHHHHcC-CCCH
Confidence 9999997542 223457788899999999998888874 34 455555411 00 0111110 0111
Q ss_pred CCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCC
Q 017290 169 QDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFG 207 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~ 207 (374)
...-..+.+..-++-..+++..+++...++-..|+|.++
T Consensus 148 ~~ig~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG 186 (325)
T cd01336 148 ENFTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHS 186 (325)
T ss_pred HHEEeeehHHHHHHHHHHHHHhCcChhhceEeEEEEcCC
Confidence 112222333333444444555677777777777888765
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.2e-07 Score=82.30 Aligned_cols=78 Identities=22% Similarity=0.173 Sum_probs=55.7
Q ss_pred CCCeEEEEcCc----------------chhHHHHHHHHHhCCCEEEEEeCCCCccccc--ccccceeEEecccchhhHhh
Q 017290 25 EKLRISVTGAG----------------GFIASHIARRLKSEGHYIIASDWKKNEHMTE--DMFCHEFHLVDLRVMDNCLK 86 (374)
Q Consensus 25 ~~~~ilItGat----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~i~~~~~dl~~~~~~~~ 86 (374)
.+|+||||+|. ||+|++|+++|+++|++|+++++........ .......+.++....+.+.+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~ 81 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS 81 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence 56899999886 9999999999999999999998654321111 11223345553333456777
Q ss_pred hcc--CCCEEEEcccccC
Q 017290 87 VTK--GVDHVFNLAADMG 102 (374)
Q Consensus 87 ~~~--~~d~vi~~a~~~~ 102 (374)
+++ ++|+|||+|+...
T Consensus 82 ~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 82 IITHEKVDAVIMAAAGSD 99 (229)
T ss_pred HhcccCCCEEEECccccc
Confidence 774 7999999999743
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.62 E-value=6.6e-08 Score=80.93 Aligned_cols=162 Identities=12% Similarity=-0.037 Sum_probs=103.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEE--eCCCCccccccc---ccceeEEecccchhhHhhhc---c----CCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIAS--DWKKNEHMTEDM---FCHEFHLVDLRVMDNCLKVT---K----GVD 92 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~--~r~~~~~~~~~~---~~i~~~~~dl~~~~~~~~~~---~----~~d 92 (374)
+.+.|||||++--||..++..+.+.+-+.... .|.......... ...-...+|++....+.... + +-|
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~ 84 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRD 84 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCcee
Confidence 44678999999999999999998887655444 333332111000 01122334444433333322 2 569
Q ss_pred EEEEcccccCCcc------cccCCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccccCCCcccccccCCCCC
Q 017290 93 HVFNLAADMGGMG------FIQSNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 93 ~vi~~a~~~~~~~------~~~~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
.|||+||..+... ...++....|+.|+-+...+...+.. .. .+-+|++||.+.--
T Consensus 85 iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~-------------- 150 (253)
T KOG1204|consen 85 IIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR-------------- 150 (253)
T ss_pred EEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc--------------
Confidence 9999999775321 11223455788898887777765543 22 24799999965521
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhhh--CCcEEEEeeCccc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKDF--GIECRVGRFHNIY 203 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~ 203 (374)
|......|+.+|++.+.+++..+.+. ++.+..++||.+=
T Consensus 151 ---p~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvD 191 (253)
T KOG1204|consen 151 ---PFSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVD 191 (253)
T ss_pred ---cccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCccc
Confidence 44455789999999999999997553 6778888888774
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.4e-06 Score=79.53 Aligned_cols=111 Identities=18% Similarity=0.046 Sum_probs=78.7
Q ss_pred CeEEEEcCcchhHHHHHHHHHh---CCCEEEEEeCCCCccc---cccccc-ceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKS---EGHYIIASDWKKNEHM---TEDMFC-HEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~---~~~~~~-i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|||+|+||+|.+|++++..|.. .++++.+++|++.... +..... ...+.+ .+.+++.+.++++|+||.++|
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG 78 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG 78 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence 7899999999999999988855 2568889898754211 111101 112222 123344566789999999999
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
.... ...+..+.+..|......+++++++++.+++|.+.|
T Consensus 79 ~~~~---~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs 118 (312)
T PRK05086 79 VARK---PGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT 118 (312)
T ss_pred CCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 7542 223456678889999999999999999888888877
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.4e-06 Score=79.66 Aligned_cols=166 Identities=16% Similarity=0.152 Sum_probs=112.2
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCC-------EEEEEeCCCCccc-ccccc----cceeEE--ecccchhhHhhhccCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGH-------YIIASDWKKNEHM-TEDMF----CHEFHL--VDLRVMDNCLKVTKGV 91 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~-~~~~~----~i~~~~--~dl~~~~~~~~~~~~~ 91 (374)
++||.|+|++|.+|..++-.|+..|. ++..++.+..... ..... ...... ..+. ....+.++++
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~~~da 79 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDPNVAFKDA 79 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCcHHHhCCC
Confidence 47999999999999999999998774 7899998543211 00000 000000 0111 1224567899
Q ss_pred CEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCC-C-eEEEeeccc---ccCCCcccccccCCCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV-K-RFFYASSAC---IYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-~-~~i~~Ss~~---vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
|+||.+|+.... ...+..+.+..|....+.+.....+++. . .+|.+|... +|- +...+ ...
T Consensus 80 DivvitaG~~~k---~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~----------~~k~s-g~~ 145 (322)
T cd01338 80 DWALLVGAKPRG---PGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALI----------AMKNA-PDI 145 (322)
T ss_pred CEEEEeCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHH----------HHHHc-CCC
Confidence 999999996432 2234566788899999999999988873 5 455554311 000 01111 013
Q ss_pred CCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCC
Q 017290 167 EPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFG 207 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~ 207 (374)
.+...||.+++..+++...+++..+++...+|...|||++.
T Consensus 146 p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG 186 (322)
T cd01338 146 PPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS 186 (322)
T ss_pred ChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence 45678999999999999999999999999999999999974
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.8e-07 Score=85.66 Aligned_cols=91 Identities=25% Similarity=0.207 Sum_probs=70.3
Q ss_pred EEEEcCcchhHHHHHHHHHhCC-C-EEEEEeCCCCccccc----ccccceeEEecccchhhHhhhccCCCEEEEcccccC
Q 017290 29 ISVTGAGGFIASHIARRLKSEG-H-YIIASDWKKNEHMTE----DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 29 ilItGatG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~----~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
|+|.|| |++|+.+++.|++++ + +|++.+|+..+.... ...+++....|+.|.+.+.++++++|+||+|+++..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 789999 999999999999986 5 899999998763322 334789999999999999999999999999998531
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEe
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYA 140 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~ 140 (374)
...++++|.+.|+ ++|-.
T Consensus 80 -------------------~~~v~~~~i~~g~-~yvD~ 97 (386)
T PF03435_consen 80 -------------------GEPVARACIEAGV-HYVDT 97 (386)
T ss_dssp -------------------HHHHHHHHHHHT--EEEES
T ss_pred -------------------hHHHHHHHHHhCC-Ceecc
Confidence 3578899999997 77763
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.45 E-value=7e-07 Score=77.73 Aligned_cols=69 Identities=13% Similarity=0.042 Sum_probs=47.9
Q ss_pred cCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccc--hhhHhhhccCCCEEEEcccccC
Q 017290 33 GAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRV--MDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 33 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~--~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
.+||++|++|+++|+++|++|+++.|....... ...+++++..+..+ .+.+.+.++++|+|||+|+...
T Consensus 23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~-~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd 93 (229)
T PRK06732 23 HSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPE-PHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD 93 (229)
T ss_pred ccchHHHHHHHHHHHhCCCEEEEEECcccccCC-CCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence 468999999999999999999999876432211 11234555443221 2355566678999999999653
|
|
| >PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A | Back alignment and domain information |
|---|
Probab=98.38 E-value=4.9e-07 Score=60.90 Aligned_cols=57 Identities=26% Similarity=0.464 Sum_probs=37.1
Q ss_pred HHHhcCCCCCcccCCCC-CCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHHHhh
Q 017290 281 VLSFEDKKLPIHHIPGP-EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQI 337 (374)
Q Consensus 281 i~~~~g~~~~~~~~~~~-~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 337 (374)
+.++.|+++++...|.. .+....+.|.+|++++|||+|++++++++++..+|++++.
T Consensus 2 ~e~vtG~~i~~~~~~rR~GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~np 59 (62)
T PF13950_consen 2 FEKVTGKKIPVEYAPRRPGDPAHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKNP 59 (62)
T ss_dssp HHHHHTS---EEEE---TT--SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHST
T ss_pred cHHHHCCCCCceECCCCCCchhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHCc
Confidence 67889999998887754 4466778899999999999999999999999999998764
|
... |
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.9e-06 Score=72.20 Aligned_cols=77 Identities=19% Similarity=0.157 Sum_probs=60.5
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-----cccceeEEecccchhhHhhhccCCCEEEEc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-----MFCHEFHLVDLRVMDNCLKVTKGVDHVFNL 97 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~ 97 (374)
..+.++++|+||+|.+|+.+++.|.+.|++|++++|+..+..... ..+..+...|..+.+++.+.++++|+||++
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a 104 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA 104 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence 446789999999999999999999999999999999864322111 113455667888888888889999999997
Q ss_pred cc
Q 017290 98 AA 99 (374)
Q Consensus 98 a~ 99 (374)
..
T Consensus 105 t~ 106 (194)
T cd01078 105 GA 106 (194)
T ss_pred CC
Confidence 65
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.6e-05 Score=74.36 Aligned_cols=105 Identities=18% Similarity=0.175 Sum_probs=69.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCCCCcccccccccceeEEecccchhhHhhh-ccCCCEEEEccccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSE-GHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAADM 101 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~~~ 101 (374)
.++|||.|.||||++|.++++.|+++ +++|+.+.+..+...............|..+.+.+... ++++|+||.+.+.
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~- 114 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH- 114 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCH-
Confidence 46789999999999999999999998 67999988765432221111112222344333333322 5789999998762
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCC
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEF 149 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~ 149 (374)
.....++..+ +.++ ++|-+|+..-+...
T Consensus 115 ------------------~~s~~i~~~~-~~g~-~VIDlSs~fRl~~~ 142 (381)
T PLN02968 115 ------------------GTTQEIIKAL-PKDL-KIVDLSADFRLRDI 142 (381)
T ss_pred ------------------HHHHHHHHHH-hCCC-EEEEcCchhccCCc
Confidence 1345566665 3554 89999998776553
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=5.4e-05 Score=69.92 Aligned_cols=77 Identities=18% Similarity=0.032 Sum_probs=57.4
Q ss_pred CCCCeEEEEcCcchhHHH--HHHHHHhCCCEEEEEeCCCCccc--------------c--cccc--cceeEEecccchhh
Q 017290 24 SEKLRISVTGAGGFIASH--IARRLKSEGHYIIASDWKKNEHM--------------T--EDMF--CHEFHLVDLRVMDN 83 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~--------------~--~~~~--~i~~~~~dl~~~~~ 83 (374)
..+|++||||+++-+|.+ +++.| +.|.+|+++++...... . .... .+..+.+|+++.+.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 456899999999999999 89999 99999988885321100 0 1111 24567899999887
Q ss_pred Hhhhcc-------CCCEEEEccccc
Q 017290 84 CLKVTK-------GVDHVFNLAADM 101 (374)
Q Consensus 84 ~~~~~~-------~~d~vi~~a~~~ 101 (374)
+.++++ ++|++||+++..
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 766553 689999999965
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.17 E-value=2.1e-06 Score=76.55 Aligned_cols=94 Identities=15% Similarity=0.134 Sum_probs=71.6
Q ss_pred CeEEEEcCcchhHHHHHHHHHh----CCCEEEEEeCCCCcccccc----------cccceeEEecccchhhHhhhccCCC
Q 017290 27 LRISVTGAGGFIASHIARRLKS----EGHYIIASDWKKNEHMTED----------MFCHEFHLVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~----------~~~i~~~~~dl~~~~~~~~~~~~~d 92 (374)
=.+.|.||+||.|..+++++.+ .+...-+..|+..+..+.. -....++.+|..|++.+.++.+++.
T Consensus 6 yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~ 85 (423)
T KOG2733|consen 6 YDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQAR 85 (423)
T ss_pred eeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhE
Confidence 3588999999999999999999 5788889999876532210 0122388899999999999999999
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEE
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i 138 (374)
+|+||+|++-.++ ..++.+|.++|. +.|
T Consensus 86 vivN~vGPyR~hG-----------------E~VVkacienG~-~~v 113 (423)
T KOG2733|consen 86 VIVNCVGPYRFHG-----------------EPVVKACIENGT-HHV 113 (423)
T ss_pred EEEeccccceecC-----------------cHHHHHHHHcCC-cee
Confidence 9999999864221 356677777665 444
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.8e-05 Score=68.80 Aligned_cols=72 Identities=19% Similarity=0.235 Sum_probs=62.8
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc--cccceeEEecccchhhHhhh-ccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED--MFCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~ 99 (374)
|+++|.| .|.+|+.+++.|.+.||+|+++++++....... .....++.+|-++.+.|+++ ++.+|++|-+.+
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence 6788888 799999999999999999999999987655522 35678999999999999998 679999999887
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.10 E-value=3.5e-05 Score=70.58 Aligned_cols=159 Identities=15% Similarity=0.116 Sum_probs=96.5
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCC-------EEEEEeCCCCcccccccccceeEEecccch-----------hhHhhhcc
Q 017290 28 RISVTGAGGFIASHIARRLKSEGH-------YIIASDWKKNEHMTEDMFCHEFHLVDLRVM-----------DNCLKVTK 89 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~-----------~~~~~~~~ 89 (374)
||.|+||+|.+|+.++..|...+. +++.++++++... .+-...|+.+. ....+.++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~------~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~ 75 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKA------LEGVVMELQDCAFPLLKGVVITTDPEEAFK 75 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCc------cceeeeehhhhcccccCCcEEecChHHHhC
Confidence 799999999999999999987652 5899998763100 12222333322 34456788
Q ss_pred CCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CC-eEEEeeccc---ccCCCcccccccCCCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VK-RFFYASSAC---IYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~-~~i~~Ss~~---vy~~~~~~~~~~~~~e~~~~ 164 (374)
++|+|||+||.... ...+..+....|+...+.+....++++ .+ .+|.+|... +|- ..+.+
T Consensus 76 ~aDiVVitAG~~~~---~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~----------~~k~s-- 140 (323)
T cd00704 76 DVDVAILVGAFPRK---PGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALI----------ALKNA-- 140 (323)
T ss_pred CCCEEEEeCCCCCC---cCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHH----------HHHHc--
Confidence 99999999997532 223456678889999999999998884 55 455554311 000 00111
Q ss_pred C-CCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCC
Q 017290 165 P-AEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFG 207 (374)
Q Consensus 165 ~-~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~ 207 (374)
. ..+....+.+.+..-++-...++..+++...+.-..|+|.++
T Consensus 141 g~~p~~~vig~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG 184 (323)
T cd00704 141 PNLPPKNFTALTRLDHNRAKAQVARKLGVRVSDVKNVIIWGNHS 184 (323)
T ss_pred CCCCHHHEEEeeHHHHHHHHHHHHHHhCcCHHHceeeeEEeccc
Confidence 1 122223344555544444444555666655555556788764
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.08 E-value=3.8e-05 Score=65.59 Aligned_cols=171 Identities=16% Similarity=0.142 Sum_probs=109.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC-----CEEEEEeCCCCcccc----------cccccceeEEecccchhhHhhh----
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG-----HYIIASDWKKNEHMT----------EDMFCHEFHLVDLRVMDNCLKV---- 87 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~----------~~~~~i~~~~~dl~~~~~~~~~---- 87 (374)
|.+||||+++-||-.|+.+|++.. ..+.+..|+-++..+ .+...++++..|+++...+..+
T Consensus 4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di 83 (341)
T KOG1478|consen 4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDI 83 (341)
T ss_pred eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHH
Confidence 568899999999999999999864 245566677654221 1244678999999986655444
Q ss_pred ---ccCCCEEEEcccccCCcc------------------------------cccCCcceehhhhHHHHHHHHHHHHh---
Q 017290 88 ---TKGVDHVFNLAADMGGMG------------------------------FIQSNHSVIMYNNTMISFNMLEASRI--- 131 (374)
Q Consensus 88 ---~~~~d~vi~~a~~~~~~~------------------------------~~~~~~~~~~~~n~~~~~~ll~a~~~--- 131 (374)
+++.|.|+.+||.....+ .+.++-..+++.|+-|+..+++....
T Consensus 84 ~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~ 163 (341)
T KOG1478|consen 84 KQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLC 163 (341)
T ss_pred HHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhh
Confidence 447899999999765322 12223344688899888777765432
Q ss_pred C-CCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCC
Q 017290 132 S-GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGP 205 (374)
Q Consensus 132 ~-~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~ 205 (374)
+ .-.++|.+||...=...- +-++........+|..||....-+--...+. .|+.-.++.||.....
T Consensus 164 ~~~~~~lvwtSS~~a~kk~l--------sleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~ 233 (341)
T KOG1478|consen 164 HSDNPQLVWTSSRMARKKNL--------SLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTN 233 (341)
T ss_pred cCCCCeEEEEeecccccccC--------CHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecc
Confidence 2 223899999965532221 1111113345678999999887664443322 2455566666665543
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.6e-05 Score=74.81 Aligned_cols=74 Identities=18% Similarity=0.126 Sum_probs=58.0
Q ss_pred CCCCeEEEEcC----------------cchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhh
Q 017290 24 SEKLRISVTGA----------------GGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87 (374)
Q Consensus 24 ~~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~ 87 (374)
..+++|||||| +|.+|.+++++|.++|++|++++++.+.. .. . .+...|+++.+++.+.
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~-~~--~--~~~~~dv~~~~~~~~~ 260 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLP-TP--A--GVKRIDVESAQEMLDA 260 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcccc-CC--C--CcEEEccCCHHHHHHH
Confidence 46799999999 89999999999999999999999876321 11 1 2345688887777666
Q ss_pred c----cCCCEEEEcccccC
Q 017290 88 T----KGVDHVFNLAADMG 102 (374)
Q Consensus 88 ~----~~~d~vi~~a~~~~ 102 (374)
+ .++|++||+|+...
T Consensus 261 v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 261 VLAALPQADIFIMAAAVAD 279 (399)
T ss_pred HHHhcCCCCEEEEcccccc
Confidence 5 36899999999753
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=3.6e-05 Score=71.11 Aligned_cols=94 Identities=18% Similarity=0.164 Sum_probs=61.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCE---EEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHY---IIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
|++|+|.||||++|+++++.|.+++|. +..+.+..+........+......|+.+. .++++|+||.+++..
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~-----~~~~vDvVf~A~g~g- 74 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTF-----DFSGVDIALFSAGGS- 74 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHH-----HHcCCCEEEECCChH-
Confidence 579999999999999999999998774 47777665433322212233444455321 236899999988732
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
.+..+.....+.|+ ++|=.|+..
T Consensus 75 ------------------~s~~~~~~~~~~G~-~VIDlS~~~ 97 (334)
T PRK14874 75 ------------------VSKKYAPKAAAAGA-VVIDNSSAF 97 (334)
T ss_pred ------------------HHHHHHHHHHhCCC-EEEECCchh
Confidence 13445555566776 666666643
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=98.00 E-value=6.8e-05 Score=68.74 Aligned_cols=160 Identities=14% Similarity=0.073 Sum_probs=96.9
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCC-------EEEEEeCCCCcccccccccceeEEecccchh-----------hHhhhcc
Q 017290 28 RISVTGAGGFIASHIARRLKSEGH-------YIIASDWKKNEHMTEDMFCHEFHLVDLRVMD-----------NCLKVTK 89 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~-----------~~~~~~~ 89 (374)
+|.|+|++|.+|++++..|...+. +++.+++++..... +-...|+.+.. ...+.++
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a------~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~ 74 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVL------EGVVMELMDCAFPLLDGVVPTHDPAVAFT 74 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccccc------ceeEeehhcccchhcCceeccCChHHHhC
Confidence 589999999999999999987543 69999986553211 12223333322 3346778
Q ss_pred CCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CC-eEEEeeccc---ccCCCcccccccCCCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VK-RFFYASSAC---IYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~-~~i~~Ss~~---vy~~~~~~~~~~~~~e~~~~ 164 (374)
++|+||++|+.... ...+..+....|+...+.+.....++. .+ .+|.+|... .|- ..+....
T Consensus 75 ~aDiVVitAG~~~~---~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v----------~~~~sg~ 141 (324)
T TIGR01758 75 DVDVAILVGAFPRK---EGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALV----------LSNYAPS 141 (324)
T ss_pred CCCEEEEcCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHH----------HHHHcCC
Confidence 99999999996432 122356678889999999999998884 54 455554311 000 0000100
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCC
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFG 207 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~ 207 (374)
+ .+...-..+.+..-++-...++..+++...++-..|+|.++
T Consensus 142 ~-~~~vig~gt~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG 183 (324)
T TIGR01758 142 I-PPKNFSALTRLDHNRALAQVAERAGVPVSDVKNVIIWGNHS 183 (324)
T ss_pred C-CcceEEEeeehHHHHHHHHHHHHhCCChhhceEeEEEECCC
Confidence 1 11122222334433444444556677777777778888865
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.97 E-value=4e-05 Score=70.46 Aligned_cols=97 Identities=19% Similarity=0.182 Sum_probs=59.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCE---EEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHY---IIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
+|++|+|+||||++|..+++.|.+++|. +..+....+........+ ...++.+.+.. + ++++|+||.+.+..
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~---~~l~~~~~~~~-~-~~~vD~vFla~p~~ 77 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG---KNLRVREVDSF-D-FSQVQLAFFAAGAA 77 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC---cceEEeeCChH-H-hcCCCEEEEcCCHH
Confidence 5689999999999999999999987764 344443322111111111 12333332221 1 47899999988621
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccccc
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy 146 (374)
....++..+.+.|+ ++|=.|+..=+
T Consensus 78 -------------------~s~~~v~~~~~~G~-~VIDlS~~fR~ 102 (336)
T PRK05671 78 -------------------VSRSFAEKARAAGC-SVIDLSGALPS 102 (336)
T ss_pred -------------------HHHHHHHHHHHCCC-eEEECchhhcC
Confidence 12346777777887 67877776543
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=97.95 E-value=5e-05 Score=59.43 Aligned_cols=94 Identities=20% Similarity=0.323 Sum_probs=58.5
Q ss_pred CeEEEEcCcchhHHHHHHHHHh-CCCEEE-EEeCCCCccccccc---ccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 27 LRISVTGAGGFIASHIARRLKS-EGHYII-ASDWKKNEHMTEDM---FCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~-~g~~V~-~~~r~~~~~~~~~~---~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
|||.|.|++|.+|+.+++.+.+ .++++. +++|+++....... .+.. ...+.-.+++.++++.+|++|++..
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~--~~~~~v~~~l~~~~~~~DVvIDfT~-- 76 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG--PLGVPVTDDLEELLEEADVVIDFTN-- 76 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS--T-SSBEBS-HHHHTTH-SEEEEES---
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC--CcccccchhHHHhcccCCEEEEcCC--
Confidence 6899999999999999999999 578865 55666532221110 0000 1122223566777777999999984
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
...+...++.|.++++ .+|.-+|
T Consensus 77 -----------------p~~~~~~~~~~~~~g~-~~ViGTT 99 (124)
T PF01113_consen 77 -----------------PDAVYDNLEYALKHGV-PLVIGTT 99 (124)
T ss_dssp -----------------HHHHHHHHHHHHHHT--EEEEE-S
T ss_pred -----------------hHHhHHHHHHHHhCCC-CEEEECC
Confidence 3345677888888887 4554433
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=1.1e-05 Score=73.67 Aligned_cols=73 Identities=19% Similarity=0.161 Sum_probs=53.1
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhC-C-CEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSE-G-HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
...+++|+||||+|+||+.+++.|+++ | .+++++.|+..+...... ++..+++. .+.+.+.++|+|||+++.
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~---el~~~~i~---~l~~~l~~aDiVv~~ts~ 225 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA---ELGGGKIL---SLEEALPEADIVVWVASM 225 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH---HhccccHH---hHHHHHccCCEEEECCcC
Confidence 346799999999999999999999865 5 689999987554322211 22223433 355778899999999985
Q ss_pred c
Q 017290 101 M 101 (374)
Q Consensus 101 ~ 101 (374)
.
T Consensus 226 ~ 226 (340)
T PRK14982 226 P 226 (340)
T ss_pred C
Confidence 3
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00011 Score=57.39 Aligned_cols=94 Identities=16% Similarity=0.176 Sum_probs=54.6
Q ss_pred eEEEEcCcchhHHHHHHHHHhCC-CEEEE-EeCCCCcccccccc-c--ceeEEecccchhhHhhhccCCCEEEEcccccC
Q 017290 28 RISVTGAGGFIASHIARRLKSEG-HYIIA-SDWKKNEHMTEDMF-C--HEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g-~~V~~-~~r~~~~~~~~~~~-~--i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
||.|+||||++|+.+++.|++.. .++.. +.++.+........ . .......+.+ .-.+.+.++|+||.|.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dvvf~a~~~-- 76 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--ADPEELSDVDVVFLALPH-- 76 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TSGHHHTTESEEEE-SCH--
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cchhHhhcCCEEEecCch--
Confidence 69999999999999999999963 46554 44444221111100 0 0011112212 112234789999999863
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecc
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~ 143 (374)
.....+...+.+.|+ ++|=.|+.
T Consensus 77 -----------------~~~~~~~~~~~~~g~-~ViD~s~~ 99 (121)
T PF01118_consen 77 -----------------GASKELAPKLLKAGI-KVIDLSGD 99 (121)
T ss_dssp -----------------HHHHHHHHHHHHTTS-EEEESSST
T ss_pred -----------------hHHHHHHHHHhhCCc-EEEeCCHH
Confidence 123556667778887 66655554
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.90 E-value=2e-05 Score=63.20 Aligned_cols=106 Identities=15% Similarity=0.121 Sum_probs=72.6
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCccccc----c---cc-cceeEEecccchhhHhhhccCCCEEEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMTE----D---MF-CHEFHLVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~----~---~~-~i~~~~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
|||.|+|++|.+|++++-.|...+ .+++.+++++...... . .. ........ ...+.++++|+||.
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-----~~~~~~~~aDivvi 75 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-----GDYEALKDADIVVI 75 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-----SSGGGGTTESEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-----ccccccccccEEEE
Confidence 789999999999999999999986 5899999986421110 0 00 01111111 22345779999999
Q ss_pred cccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEe
Q 017290 97 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYA 140 (374)
Q Consensus 97 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~ 140 (374)
+++.... ...+..+.+..|....+.+.+...+.+.+ .++.+
T Consensus 76 tag~~~~---~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivv 117 (141)
T PF00056_consen 76 TAGVPRK---PGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVV 117 (141)
T ss_dssp TTSTSSS---TTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-
T ss_pred ecccccc---ccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEe
Confidence 9996432 22345667788999999999999988855 34433
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00098 Score=56.45 Aligned_cols=217 Identities=15% Similarity=0.058 Sum_probs=121.9
Q ss_pred CCCCCeEEEEcCc--chhHHHHHHHHHhCCCEEEEEeCCCCc---ccccc-cc-cceeEEecccchhhHhhhcc------
Q 017290 23 PSEKLRISVTGAG--GFIASHIARRLKSEGHYIIASDWKKNE---HMTED-MF-CHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 23 ~~~~~~ilItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~-~~-~i~~~~~dl~~~~~~~~~~~------ 89 (374)
.+.+|++||+|-. -.|+..|++.|.++|.++......+.- ..+.. .. ...++.+|+++.+.+..++.
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~ 82 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW 82 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh
Confidence 3478999999954 689999999999999999888766531 11111 11 23578999999888877764
Q ss_pred -CCCEEEEcccccCCcc----cccCCcce---ehhhhHHHHHHHHHHHHh---CCCCeEEEeecccccCCCcccccccCC
Q 017290 90 -GVDHVFNLAADMGGMG----FIQSNHSV---IMYNNTMISFNMLEASRI---SGVKRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~----~~~~~~~~---~~~~n~~~~~~ll~a~~~---~~~~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
+.|.++|+.+..+... +.+...+. ..++-.-....+..+++. .|- .+|-+| |-...
T Consensus 83 g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~gg-SiltLt----Ylgs~-------- 149 (259)
T COG0623 83 GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGG-SILTLT----YLGSE-------- 149 (259)
T ss_pred CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCC-cEEEEE----eccce--------
Confidence 7899999999765211 11111111 111122222333333332 121 333221 11100
Q ss_pred CCCCCCCCCC-CCchHHhHHHHHHHHHHHHhhhC---CcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeC
Q 017290 159 KESDAWPAEP-QDAYGLEKLASEELCKHYTKDFG---IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWG 234 (374)
Q Consensus 159 ~e~~~~~~~~-~~~y~~sK~~~E~~~~~~~~~~~---~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (374)
..-| -+.-|.+|+.-|.-++..+...| +++..+-.|.+=--... .-.....++.. ..
T Consensus 150 ------r~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAas---gI~~f~~~l~~-~e--------- 210 (259)
T COG0623 150 ------RVVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAAS---GIGDFRKMLKE-NE--------- 210 (259)
T ss_pred ------eecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhh---ccccHHHHHHH-HH---------
Confidence 1122 36889999999999988876544 55555544443211000 00111222221 11
Q ss_pred CCcccccceeHHHHHHHHHhhhcc---C-CCCcEEecCCCc
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKS---D-FREPVNIGSDEM 271 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~---~-~~~~~~i~~~~~ 271 (374)
...+.+.-+.++||+...+.++.. . .+++.++.+|-.
T Consensus 211 ~~aPl~r~vt~eeVG~tA~fLlSdLssgiTGei~yVD~G~~ 251 (259)
T COG0623 211 ANAPLRRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSGYH 251 (259)
T ss_pred hhCCccCCCCHHHhhhhHHHHhcchhcccccceEEEcCCce
Confidence 112344557799999988887754 2 367777776643
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=97.85 E-value=2.9e-05 Score=67.56 Aligned_cols=64 Identities=16% Similarity=0.180 Sum_probs=44.3
Q ss_pred EcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhh-------ccCCCEEEEccccc
Q 017290 32 TGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV-------TKGVDHVFNLAADM 101 (374)
Q Consensus 32 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~-------~~~~d~vi~~a~~~ 101 (374)
-.++|.||+++++.|+++|++|+++++...... . ....+|+.+.+.+.++ +.++|++||+||..
T Consensus 21 N~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l~~-~-----~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~ 91 (227)
T TIGR02114 21 NHSTGHLGKIITETFLSAGHEVTLVTTKRALKP-E-----PHPNLSIREIETTKDLLITLKELVQEHDILIHSMAVS 91 (227)
T ss_pred CCcccHHHHHHHHHHHHCCCEEEEEcChhhccc-c-----cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEec
Confidence 346899999999999999999999876422110 0 1123566665555443 23689999999964
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00011 Score=66.99 Aligned_cols=112 Identities=14% Similarity=0.049 Sum_probs=71.7
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCC--ccccccc---cc--ceeEEecccchhhHhhhccCCCEEEEc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKN--EHMTEDM---FC--HEFHLVDLRVMDNCLKVTKGVDHVFNL 97 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~--~~~~~~~---~~--i~~~~~dl~~~~~~~~~~~~~d~vi~~ 97 (374)
|||.|+|++|++|..++..|+..|+ +|+++++..+ ....... .. .......+....+.. .++++|+||-+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~~-~l~~aDiViit 79 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLS-DVAGSDIVIIT 79 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCHH-HhCCCCEEEEe
Confidence 7899999999999999999999986 5999999542 1110000 00 000001121111233 47899999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
++.... ...+..+....|....+.+++...+.+.+ ++|.+++
T Consensus 80 ag~p~~---~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n 122 (309)
T cd05294 80 AGVPRK---EGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN 122 (309)
T ss_pred cCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 986432 11233556777889999999888777644 5666665
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.84 E-value=6.7e-05 Score=72.70 Aligned_cols=72 Identities=14% Similarity=0.139 Sum_probs=60.8
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc-ccceeEEecccchhhHhhh-ccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM-FCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~ 99 (374)
|+|+|+|+ |.+|+++++.|.+.|++|+++++++........ .+++++.+|.++.+.+.++ ++++|.||-+..
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~ 74 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTD 74 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence 68999996 999999999999999999999998765443332 4678999999999988888 789999988875
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.81 E-value=8.9e-05 Score=67.33 Aligned_cols=162 Identities=15% Similarity=0.079 Sum_probs=97.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCccc--cccc--ccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHM--TEDM--FCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~--~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
|||.|+|++|.+|++++-.|...+ .++..++.+..... +... ....+ .+ ....+++.+.++++|+||-+||.
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i-~~-~~~~~~~y~~~~daDivvitaG~ 78 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKV-TG-YLGPEELKKALKGADVVVIPAGV 78 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceE-EE-ecCCCchHHhcCCCCEEEEeCCC
Confidence 689999999999999999998887 48888888711110 0000 00111 11 00112345678899999999996
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeeccc-------ccCCCcccccccCCCCCCCCCCCCCCch
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASSAC-------IYPEFKQLETNVSLKESDAWPAEPQDAY 172 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss~~-------vy~~~~~~~~~~~~~e~~~~~~~~~~~y 172 (374)
... ...+..+....|....+.+.+...+++.+ .+|.+|... .|-- ...+ ...+....
T Consensus 79 ~~k---~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~----------~~~s--~~p~~rvi 143 (310)
T cd01337 79 PRK---PGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVL----------KKAG--VYDPKRLF 143 (310)
T ss_pred CCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHH----------HHhc--CCCHHHEE
Confidence 432 23345677888999999999999888765 566555532 1110 0011 11122233
Q ss_pred HHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCC
Q 017290 173 GLEKLASEELCKHYTKDFGIECRVGRFHNIYGPF 206 (374)
Q Consensus 173 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~ 206 (374)
|..-+..-++....++..+++..-++ +.|+|.+
T Consensus 144 G~~~LDs~R~~~~la~~l~v~~~~V~-~~v~GeH 176 (310)
T cd01337 144 GVTTLDVVRANTFVAELLGLDPAKVN-VPVIGGH 176 (310)
T ss_pred eeechHHHHHHHHHHHHhCcCHHHEE-EEEEecC
Confidence 33333334444555555677666666 7788887
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.81 E-value=3.1e-05 Score=68.73 Aligned_cols=79 Identities=16% Similarity=0.130 Sum_probs=60.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-ccccceeEEecccchhhHhhhccCCCEEEEcccccCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGG 103 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~ 103 (374)
+...++|-||+||.|.-++++|+.+|.+-....|+..+.... ...+.+.-...+.+++.+.+++.+.++|+||+|++..
T Consensus 5 ~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt~ 84 (382)
T COG3268 5 REYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPYTR 84 (382)
T ss_pred cceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEeccccccc
Confidence 345799999999999999999999999887777876653321 1123344445555688899999999999999998753
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00013 Score=57.06 Aligned_cols=93 Identities=17% Similarity=0.205 Sum_probs=71.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGM 104 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~ 104 (374)
+.++|+++| +| -|.++++.|.+.|++|++++.++..........+.++.+|+.+++ .++.+++|.|.-+=.
T Consensus 16 ~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~--~~~y~~a~liysirp----- 86 (134)
T PRK04148 16 KNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPN--LEIYKNAKLIYSIRP----- 86 (134)
T ss_pred cCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCC--HHHHhcCCEEEEeCC-----
Confidence 457899999 67 888999999999999999999987544444456789999998876 344568888877643
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEE
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFY 139 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~ 139 (374)
-.+....+++.+++.++.-+|.
T Consensus 87 -------------p~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 87 -------------PRDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred -------------CHHHHHHHHHHHHHcCCCEEEE
Confidence 2344678999999999875553
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00047 Score=60.52 Aligned_cols=92 Identities=21% Similarity=0.175 Sum_probs=72.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMG 102 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~ 102 (374)
+|++|||.|||+ =|+.+++.|.+.|+.|++..-..... .....+.+..+-+.+.+.+...++ +++.||+...++
T Consensus 1 ~~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~--~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPf- 76 (248)
T PRK08057 1 MMPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG--PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPY- 76 (248)
T ss_pred CCceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC--cccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCcc-
Confidence 468899999886 58999999999999888766554333 223356788888878889999886 899999998764
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCC
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~ 135 (374)
-...+.++.++|++.+++
T Consensus 77 ---------------A~~is~~a~~ac~~~~ip 94 (248)
T PRK08057 77 ---------------AAQISANAAAACRALGIP 94 (248)
T ss_pred ---------------HHHHHHHHHHHHHHhCCc
Confidence 345578999999999986
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00025 Score=65.78 Aligned_cols=100 Identities=17% Similarity=0.165 Sum_probs=61.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCCCCcccccc--cccceeE-EecccchhhHhhhccCCCEEEEcccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSE-GHYIIASDWKKNEHMTED--MFCHEFH-LVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~--~~~i~~~-~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
+|++|+|+||||++|+.+++.|.+. ++++.++.++.+...... ...+... ..++.+.+.. ..+++|+||.|...
T Consensus 1 ~m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~ 78 (343)
T PRK00436 1 MMIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALPH 78 (343)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCCc
Confidence 3589999999999999999999987 678877665432211110 0001111 1123333322 34679999998752
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccccc
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy 146 (374)
.....++..+.+.|+ ++|=.|+..=+
T Consensus 79 -------------------~~~~~~v~~a~~aG~-~VID~S~~fR~ 104 (343)
T PRK00436 79 -------------------GVSMDLAPQLLEAGV-KVIDLSADFRL 104 (343)
T ss_pred -------------------HHHHHHHHHHHhCCC-EEEECCcccCC
Confidence 123556666666775 88888886555
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00017 Score=66.10 Aligned_cols=103 Identities=18% Similarity=0.166 Sum_probs=62.1
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-----------cccc------eeEEecccchhhHhhhc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-----------MFCH------EFHLVDLRVMDNCLKVT 88 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~i------~~~~~dl~~~~~~~~~~ 88 (374)
+|+|.|+| .|.+|..++..|+++||+|++++|++....... ..+. ......+.-..++.+++
T Consensus 2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~ 80 (308)
T PRK06129 2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAV 80 (308)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhh
Confidence 36899999 899999999999999999999999864322100 0000 00001111223455667
Q ss_pred cCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccccc
Q 017290 89 KGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146 (374)
Q Consensus 89 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy 146 (374)
+++|+||.+... +......++..+.+...+..|+.||+..+
T Consensus 81 ~~ad~Vi~avpe-----------------~~~~k~~~~~~l~~~~~~~~ii~ssts~~ 121 (308)
T PRK06129 81 ADADYVQESAPE-----------------NLELKRALFAELDALAPPHAILASSTSAL 121 (308)
T ss_pred CCCCEEEECCcC-----------------CHHHHHHHHHHHHHhCCCcceEEEeCCCC
Confidence 789999998752 12222334444444333456667776654
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00037 Score=64.91 Aligned_cols=36 Identities=19% Similarity=0.324 Sum_probs=30.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKK 60 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~ 60 (374)
++++|+|+||||++|+++++.|++.. .++.++.++.
T Consensus 2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~ 38 (349)
T PRK08664 2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE 38 (349)
T ss_pred CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence 46899999999999999999999875 4888885554
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00023 Score=66.79 Aligned_cols=104 Identities=11% Similarity=-0.001 Sum_probs=68.6
Q ss_pred CCCCeEEEEcC----------------cchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhH-hh
Q 017290 24 SEKLRISVTGA----------------GGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNC-LK 86 (374)
Q Consensus 24 ~~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~-~~ 86 (374)
..+++|||||| ||.+|.+++++|..+|++|+++.+....... . .+...|+.+.+++ ..
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~~---~--~~~~~~v~~~~~~~~~ 257 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLTP---P--GVKSIKVSTAEEMLEA 257 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCCC---C--CcEEEEeccHHHHHHH
Confidence 46799999998 4789999999999999999999876543211 1 2345677777666 33
Q ss_pred hc----cCCCEEEEcccccCCcccc--cCCc---ceehhhhHHHHHHHHHHHHhC
Q 017290 87 VT----KGVDHVFNLAADMGGMGFI--QSNH---SVIMYNNTMISFNMLEASRIS 132 (374)
Q Consensus 87 ~~----~~~d~vi~~a~~~~~~~~~--~~~~---~~~~~~n~~~~~~ll~a~~~~ 132 (374)
++ .++|++|++|+........ .... ...+..|+.-+.-++...++.
T Consensus 258 ~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~ 312 (390)
T TIGR00521 258 ALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKI 312 (390)
T ss_pred HHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhh
Confidence 33 3689999999976421111 1111 112335666666777766654
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00046 Score=61.33 Aligned_cols=86 Identities=14% Similarity=0.247 Sum_probs=56.9
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhC-CCEEEE-EeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSE-GHYIIA-SDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGG 103 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~-g~~V~~-~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~ 103 (374)
+|+|.|+|++|.+|+.+++.+.+. +.++.+ +++.+...... ...++...+++.++++++|+||+++.+.
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-------~~~~i~~~~dl~~ll~~~DvVid~t~p~-- 71 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-------GALGVAITDDLEAVLADADVLIDFTTPE-- 71 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-------CCCCccccCCHHHhccCCCEEEECCCHH--
Confidence 479999999999999999998874 678766 44544332211 1123333445666677899999998532
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEE
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i 138 (374)
....++..|.++|+ ++|
T Consensus 72 -----------------~~~~~~~~al~~G~-~vv 88 (257)
T PRK00048 72 -----------------ATLENLEFALEHGK-PLV 88 (257)
T ss_pred -----------------HHHHHHHHHHHcCC-CEE
Confidence 12456667777775 444
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00028 Score=65.21 Aligned_cols=91 Identities=14% Similarity=0.184 Sum_probs=58.0
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEE---EEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCc
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYII---ASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGM 104 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~ 104 (374)
+|+|+||||++|+.+++.|.+++|.+. .+.+..+........+......|+. ...++++|+||.+++..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~D~v~~a~g~~--- 72 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK-----IESFEGIDIALFSAGGS--- 72 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC-----hHHhcCCCEEEECCCHH---
Confidence 589999999999999999999888643 4445544333222223344555553 12347899999999732
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecc
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~ 143 (374)
.+..++..+.+.|+ ++|=.|+.
T Consensus 73 ----------------~s~~~a~~~~~~G~-~VID~ss~ 94 (339)
T TIGR01296 73 ----------------VSKEFAPKAAKCGA-IVIDNTSA 94 (339)
T ss_pred ----------------HHHHHHHHHHHCCC-EEEECCHH
Confidence 13444555556676 56655654
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0003 Score=54.28 Aligned_cols=70 Identities=20% Similarity=0.129 Sum_probs=57.4
Q ss_pred EEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhc-cCCCEEEEccc
Q 017290 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT-KGVDHVFNLAA 99 (374)
Q Consensus 29 ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~-~~~d~vi~~a~ 99 (374)
|+|.| .|.+|+.+++.|.+.+.+|+++++++.........++.++.+|.++.+.+.++- ++++.||-+..
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccC
Confidence 57888 589999999999997779999999987655555567899999999999888764 68898888875
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00016 Score=75.31 Aligned_cols=75 Identities=20% Similarity=0.169 Sum_probs=58.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhC-CCE-------------EEEEeCCCCcccccc--cccceeEEecccchhhHhhhc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSE-GHY-------------IIASDWKKNEHMTED--MFCHEFHLVDLRVMDNCLKVT 88 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~-g~~-------------V~~~~r~~~~~~~~~--~~~i~~~~~dl~~~~~~~~~~ 88 (374)
.+++|+|+|+ |++|+.+++.|.+. +++ |++.+++........ ..+++.+..|+.|.+++.+++
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v 646 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYV 646 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhh
Confidence 5789999995 99999999999875 334 777777754432221 124677899999999999998
Q ss_pred cCCCEEEEcccc
Q 017290 89 KGVDHVFNLAAD 100 (374)
Q Consensus 89 ~~~d~vi~~a~~ 100 (374)
+++|+||.|...
T Consensus 647 ~~~DaVIsalP~ 658 (1042)
T PLN02819 647 SQVDVVISLLPA 658 (1042)
T ss_pred cCCCEEEECCCc
Confidence 999999999974
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00038 Score=64.65 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=59.6
Q ss_pred CeEEEEcCcchhHHHHHHHHHhC-CCEEEEE-eCCCCcccccc--cccceeE-EecccchhhHhhhccCCCEEEEccccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSE-GHYIIAS-DWKKNEHMTED--MFCHEFH-LVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~--~~~i~~~-~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
|+|+|+||||++|..+++.|.+. ++++..+ +++.+...... ...+... ..++.+. +..++.+++|+||.|.+..
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~DvVf~alP~~ 79 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPI-DEEEIAEDADVVFLALPHG 79 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecC-CHHHhhcCCCEEEECCCch
Confidence 58999999999999999999987 6788744 54432211110 1111111 1112111 2233445899999998621
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccccc
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy 146 (374)
.+..++..+.+.|+ ++|=.|+..=+
T Consensus 80 -------------------~s~~~~~~~~~~G~-~VIDlS~~fR~ 104 (346)
T TIGR01850 80 -------------------VSAELAPELLAAGV-KVIDLSADFRL 104 (346)
T ss_pred -------------------HHHHHHHHHHhCCC-EEEeCChhhhc
Confidence 23556666667774 89988886544
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00099 Score=61.59 Aligned_cols=95 Identities=15% Similarity=0.112 Sum_probs=56.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC---EEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH---YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
..++|+|.||||++|.++++.|.+++| ++..+....+........+..+...++. ...++++|+||.+++..
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~~~~~~v~~~~-----~~~~~~~D~vf~a~p~~ 80 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFEGRDYTVEELT-----EDSFDGVDIALFSAGGS 80 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeecCceeEEEeCC-----HHHHcCCCEEEECCCcH
Confidence 568999999999999999999998887 3444433322111111111222222322 12346899999888631
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
....+...+.+.|+ ++|=.|+..
T Consensus 81 -------------------~s~~~~~~~~~~g~-~VIDlS~~f 103 (344)
T PLN02383 81 -------------------ISKKFGPIAVDKGA-VVVDNSSAF 103 (344)
T ss_pred -------------------HHHHHHHHHHhCCC-EEEECCchh
Confidence 12344445555675 677777754
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00039 Score=58.23 Aligned_cols=73 Identities=11% Similarity=0.042 Sum_probs=44.4
Q ss_pred CCCeEEEEcC----------------cchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhh----H
Q 017290 25 EKLRISVTGA----------------GGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDN----C 84 (374)
Q Consensus 25 ~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~----~ 84 (374)
.+++||||+| ||..|.+|++++..+|++|+.+..+.+-.. ..+++.+.. ...++ +
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~---p~~~~~i~v--~sa~em~~~~ 76 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPP---PPGVKVIRV--ESAEEMLEAV 76 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------TTEEEEE---SSHHHHHHHH
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccc---cccceEEEe--cchhhhhhhh
Confidence 3567777765 689999999999999999999998853211 123444443 33333 3
Q ss_pred hhhccCCCEEEEcccccC
Q 017290 85 LKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 85 ~~~~~~~d~vi~~a~~~~ 102 (374)
.+.++++|++||+|+...
T Consensus 77 ~~~~~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 77 KELLPSADIIIMAAAVSD 94 (185)
T ss_dssp HHHGGGGSEEEE-SB--S
T ss_pred ccccCcceeEEEecchhh
Confidence 444557899999999754
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00054 Score=66.37 Aligned_cols=100 Identities=15% Similarity=0.053 Sum_probs=71.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc--ccceeEEecccchhhHhhh-ccCCCEEEEccccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM--FCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAADM 101 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~~~ 101 (374)
.+++|+|+|+ |.+|+.+++.|.+.|++|+++++++........ .++.++.+|.++.+.+.++ +++++.||-+....
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~~ 308 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTNDD 308 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCCCc
Confidence 4689999995 999999999999999999999988765433222 2567899999998888654 46899988665410
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecc
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~ 143 (374)
..|+. +...+++.+.+++|.....
T Consensus 309 --------------~~n~~----~~~~~~~~~~~~ii~~~~~ 332 (453)
T PRK09496 309 --------------EANIL----SSLLAKRLGAKKVIALVNR 332 (453)
T ss_pred --------------HHHHH----HHHHHHHhCCCeEEEEECC
Confidence 12332 3345666777676655443
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00035 Score=67.62 Aligned_cols=71 Identities=24% Similarity=0.246 Sum_probs=53.2
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-----ccccccceeEEecccchhhHhhhccCCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-----TEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
.+.++|+|+|+++ +|..+++.|++.|++|+++++...... .....++.++.+|..+ ....++|+||+++
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~ 76 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSP 76 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECC
Confidence 4568999999777 999999999999999999998753221 1112256677777654 2346799999998
Q ss_pred cc
Q 017290 99 AD 100 (374)
Q Consensus 99 ~~ 100 (374)
+.
T Consensus 77 g~ 78 (450)
T PRK14106 77 GV 78 (450)
T ss_pred CC
Confidence 85
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0015 Score=51.95 Aligned_cols=101 Identities=22% Similarity=0.191 Sum_probs=67.9
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccc--------c-------------------ccccceeEEec
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMT--------E-------------------DMFCHEFHLVD 77 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--------~-------------------~~~~i~~~~~d 77 (374)
.++|+|.| .|-+|+++++.|...|. ++++++...-.... . ....++.+..+
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 47899999 79999999999999997 78888754311000 0 01133444445
Q ss_pred ccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccC
Q 017290 78 LRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147 (374)
Q Consensus 78 l~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~ 147 (374)
+ +.+.+.+.++++|+||.|.. +...-..+.+.|++.++ .+|+.++.+.+|
T Consensus 81 ~-~~~~~~~~~~~~d~vi~~~d------------------~~~~~~~l~~~~~~~~~-p~i~~~~~g~~G 130 (135)
T PF00899_consen 81 I-DEENIEELLKDYDIVIDCVD------------------SLAARLLLNEICREYGI-PFIDAGVNGFYG 130 (135)
T ss_dssp C-SHHHHHHHHHTSSEEEEESS------------------SHHHHHHHHHHHHHTT--EEEEEEEETTEE
T ss_pred c-ccccccccccCCCEEEEecC------------------CHHHHHHHHHHHHHcCC-CEEEEEeecCEE
Confidence 4 34566777789999999875 34444567788999997 788887765544
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00081 Score=61.57 Aligned_cols=110 Identities=17% Similarity=0.149 Sum_probs=75.5
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCccccc----cc-----ccceeEEecccchhhHhhhccC
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTE----DM-----FCHEFHLVDLRVMDNCLKVTKG 90 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~-----~~i~~~~~dl~~~~~~~~~~~~ 90 (374)
++...+||.|+|+ |.+|+.++-.|+..|. ++..++++....... .. ..+.+. . +.+ +.+++
T Consensus 2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~-----~~~-~~~~~ 73 (315)
T PRK00066 2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A-----GDY-SDCKD 73 (315)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e-----CCH-HHhCC
Confidence 3446789999997 9999999999998886 899999876532111 00 011111 1 112 34789
Q ss_pred CCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 91 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
+|+||.+|+.... ...+..+.+..|+...+.+++.+++.+.+ .+|.+|.
T Consensus 74 adivIitag~~~k---~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsN 123 (315)
T PRK00066 74 ADLVVITAGAPQK---PGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASN 123 (315)
T ss_pred CCEEEEecCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 9999999996432 22345667888999999999999887755 4554443
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0018 Score=59.79 Aligned_cols=103 Identities=15% Similarity=0.175 Sum_probs=71.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccc-----------------------------cccccceeE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMT-----------------------------EDMFCHEFH 74 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-----------------------------~~~~~i~~~ 74 (374)
+.++|+|+| .|-+|+++++.|...|. +++++++..-.... .....++.+
T Consensus 23 ~~~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~ 101 (338)
T PRK12475 23 REKHVLIVG-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPV 101 (338)
T ss_pred cCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEE
Confidence 568899999 57799999999999997 88888876411000 011134455
Q ss_pred EecccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCC
Q 017290 75 LVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPE 148 (374)
Q Consensus 75 ~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~ 148 (374)
..+++ .+.+.++++++|+||.+.. |...-..+-++|.+.++ .+|+.+..+.+|.
T Consensus 102 ~~~~~-~~~~~~~~~~~DlVid~~D------------------~~~~r~~in~~~~~~~i-p~i~~~~~g~~G~ 155 (338)
T PRK12475 102 VTDVT-VEELEELVKEVDLIIDATD------------------NFDTRLLINDLSQKYNI-PWIYGGCVGSYGV 155 (338)
T ss_pred eccCC-HHHHHHHhcCCCEEEEcCC------------------CHHHHHHHHHHHHHcCC-CEEEEEecccEEE
Confidence 55654 3567778889999999975 33333445578888887 5788777666654
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0017 Score=60.09 Aligned_cols=103 Identities=17% Similarity=0.234 Sum_probs=72.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccc-----------------------------cccccceeE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMT-----------------------------EDMFCHEFH 74 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-----------------------------~~~~~i~~~ 74 (374)
...+|+|+| .|.+|+++++.|...|. +|++++...-.... .....++.+
T Consensus 23 ~~~~VlVvG-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~ 101 (339)
T PRK07688 23 REKHVLIIG-AGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAI 101 (339)
T ss_pred cCCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence 567899999 59999999999999997 89999876311000 001123444
Q ss_pred EecccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCC
Q 017290 75 LVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPE 148 (374)
Q Consensus 75 ~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~ 148 (374)
..+++ .+.+.++++++|+||.+.. |...-..+-++|.+.++ .+|+.|+...||.
T Consensus 102 ~~~~~-~~~~~~~~~~~DlVid~~D------------------n~~~r~~ln~~~~~~~i-P~i~~~~~g~~G~ 155 (339)
T PRK07688 102 VQDVT-AEELEELVTGVDLIIDATD------------------NFETRFIVNDAAQKYGI-PWIYGACVGSYGL 155 (339)
T ss_pred eccCC-HHHHHHHHcCCCEEEEcCC------------------CHHHHHHHHHHHHHhCC-CEEEEeeeeeeeE
Confidence 45553 3456677888999999975 44444566788999987 5888888777664
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0021 Score=54.66 Aligned_cols=104 Identities=14% Similarity=0.064 Sum_probs=67.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc---------------------------ccc--cceeE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE---------------------------DMF--CHEFH 74 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---------------------------~~~--~i~~~ 74 (374)
+..+|+|.|++| +|.++++.|...|. ++++++...-..... ..+ .++.+
T Consensus 18 ~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~ 96 (198)
T cd01485 18 RSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIV 96 (198)
T ss_pred hhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEE
Confidence 457899999766 99999999999995 688887653210000 001 23333
Q ss_pred Eecccc-hhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCC
Q 017290 75 LVDLRV-MDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPE 148 (374)
Q Consensus 75 ~~dl~~-~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~ 148 (374)
..++.+ .+...+.++++|+||.+.. +......+-+.|++.++ .+|+.++.+.||.
T Consensus 97 ~~~~~~~~~~~~~~~~~~dvVi~~~d------------------~~~~~~~ln~~c~~~~i-p~i~~~~~G~~G~ 152 (198)
T cd01485 97 EEDSLSNDSNIEEYLQKFTLVIATEE------------------NYERTAKVNDVCRKHHI-PFISCATYGLIGY 152 (198)
T ss_pred ecccccchhhHHHHHhCCCEEEECCC------------------CHHHHHHHHHHHHHcCC-CEEEEEeecCEEE
Confidence 333331 3344556678888887753 23334556788999997 6888888777764
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0013 Score=60.18 Aligned_cols=169 Identities=14% Similarity=0.082 Sum_probs=99.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-------EEEEEeCCCCccc-ccccc---cce-eEEecccchhhHhhhccCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-------YIIASDWKKNEHM-TEDMF---CHE-FHLVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~-~~~~~---~i~-~~~~dl~~~~~~~~~~~~~d 92 (374)
++.||.|+|++|.+|++++-.|+..+. ++..++.++.... ..... ... ....+..-.....+.++++|
T Consensus 2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daD 81 (323)
T TIGR01759 2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDVD 81 (323)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCCC
Confidence 457899999999999999999988874 7999998653210 00000 000 00001100112245678999
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCC-C-eEEEeeccc---ccCCCcccccccCCCCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV-K-RFFYASSAC---IYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-~-~~i~~Ss~~---vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
+||.+||.... ...+..+.+..|....+.+...+.+++. + .+|.+|... +|- ..+.++ ...
T Consensus 82 vVVitAG~~~k---~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v----------~~k~s~-g~p 147 (323)
T TIGR01759 82 AALLVGAFPRK---PGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALI----------ASKNAP-DIP 147 (323)
T ss_pred EEEEeCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHH----------HHHHcC-CCC
Confidence 99999996432 2335566788899999999999998875 5 444444310 000 000000 011
Q ss_pred CCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCC
Q 017290 168 PQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFG 207 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~ 207 (374)
+....|.+.+..-++-...++..+++...++-..|+|.++
T Consensus 148 ~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG 187 (323)
T TIGR01759 148 PKNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHS 187 (323)
T ss_pred HHHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCC
Confidence 2223334555544444445566677777777777888765
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00022 Score=58.76 Aligned_cols=66 Identities=21% Similarity=0.200 Sum_probs=46.8
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
||+|.++| .|-+|+.+++.|+++||+|++.+|++++.......+++ -.+...++.+++|+||-|..
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~-------~~~s~~e~~~~~dvvi~~v~ 66 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAE-------VADSPAEAAEQADVVILCVP 66 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEE-------EESSHHHHHHHBSEEEE-SS
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhh-------hhhhhhhHhhcccceEeecc
Confidence 68999999 79999999999999999999999987654433322221 12334556677899998875
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00027 Score=59.37 Aligned_cols=73 Identities=22% Similarity=0.266 Sum_probs=41.0
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeE-------------EecccchhhHhhhccCCCE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFH-------------LVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~-------------~~dl~~~~~~~~~~~~~d~ 93 (374)
|||.|.| .||+|..++..|.+.||+|++++.++............+. .+.+.-..+...+++.+|+
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv 79 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV 79 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence 7899997 9999999999999999999999988753222111100110 1122222334455667899
Q ss_pred EEEcccc
Q 017290 94 VFNLAAD 100 (374)
Q Consensus 94 vi~~a~~ 100 (374)
+|-|.+.
T Consensus 80 ~~I~VpT 86 (185)
T PF03721_consen 80 VFICVPT 86 (185)
T ss_dssp EEE----
T ss_pred EEEecCC
Confidence 9999874
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.32 E-value=9.3e-05 Score=58.88 Aligned_cols=74 Identities=19% Similarity=0.147 Sum_probs=51.8
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCE-EEEEeCCCCcccccccc--cceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHMTEDMF--CHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~--~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
....++++|.|+ |-.|+.++..|.+.|.+ |+++.|+..+....... +..+...++ +++...+.++|+||++.+
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~---~~~~~~~~~~DivI~aT~ 84 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPL---EDLEEALQEADIVINATP 84 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEG---GGHCHHHHTESEEEE-SS
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeH---HHHHHHHhhCCeEEEecC
Confidence 456799999995 88999999999999975 99999987653322111 112222333 445566779999999987
Q ss_pred c
Q 017290 100 D 100 (374)
Q Consensus 100 ~ 100 (374)
.
T Consensus 85 ~ 85 (135)
T PF01488_consen 85 S 85 (135)
T ss_dssp T
T ss_pred C
Confidence 4
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0005 Score=62.24 Aligned_cols=76 Identities=17% Similarity=0.125 Sum_probs=56.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCE-EEEEeCCC---Cccccc------ccccceeEEecccchhhHhhhccCCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHY-IIASDWKK---NEHMTE------DMFCHEFHLVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~-V~~~~r~~---~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~~~d~ 93 (374)
.++++++|+|| |-+|++++..|.+.|.+ |++++|+. .+.... ....+.+...|+.+.+.+...++.+|+
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di 202 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI 202 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence 45688999998 89999999999999985 99999986 221111 011234556788777777777888999
Q ss_pred EEEcccc
Q 017290 94 VFNLAAD 100 (374)
Q Consensus 94 vi~~a~~ 100 (374)
|||+...
T Consensus 203 lINaTp~ 209 (289)
T PRK12548 203 LVNATLV 209 (289)
T ss_pred EEEeCCC
Confidence 9998764
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0032 Score=57.79 Aligned_cols=169 Identities=12% Similarity=0.092 Sum_probs=97.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-------EEEEEeCCCCccc-ccccc---cce-eEEecccchhhHhhhccCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-------YIIASDWKKNEHM-TEDMF---CHE-FHLVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~-~~~~~---~i~-~~~~dl~~~~~~~~~~~~~d 92 (374)
+++||.|+|++|.+|+.++-.|...+. ++..++.++.... ..... ... ....+..-.....+.++++|
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~daD 82 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFKDAD 82 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhCCCC
Confidence 568999999999999999999887653 7889988653211 00000 000 00001000112235678999
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CC-eEEEeeccc---ccCCCcccccccCCCCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VK-RFFYASSAC---IYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~-~~i~~Ss~~---vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
+||-+|+.... ...+..+.+..|....+.+.....++. .+ .+|.+|... .|- ..+.++ ...
T Consensus 83 iVVitaG~~~k---~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v----------~~k~s~-g~p 148 (326)
T PRK05442 83 VALLVGARPRG---PGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALI----------AMKNAP-DLP 148 (326)
T ss_pred EEEEeCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHH----------HHHHcC-CCC
Confidence 99999996432 233556778889999999999988854 34 566555411 000 000000 011
Q ss_pred CCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCC
Q 017290 168 PQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFG 207 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~ 207 (374)
+....|.+-+..-++-...++..+++...++...|+|.++
T Consensus 149 ~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG 188 (326)
T PRK05442 149 AENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNHS 188 (326)
T ss_pred HHHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECCc
Confidence 1223444444444444445566677767676656778764
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0032 Score=53.48 Aligned_cols=102 Identities=17% Similarity=0.130 Sum_probs=65.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc-------------------------ccc--cceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE-------------------------DMF--CHEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-------------------------~~~--~i~~~~~ 76 (374)
+..+|+|.|++| +|.++++.|...|. ++++++...-..... ..+ .++.+..
T Consensus 20 ~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~ 98 (197)
T cd01492 20 RSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTD 98 (197)
T ss_pred HhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEec
Confidence 457899999655 99999999999995 688887553211100 001 2233333
Q ss_pred cccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCC
Q 017290 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPE 148 (374)
Q Consensus 77 dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~ 148 (374)
.+. +...+.++++|+||.+.. +......+-++|++.++ .+|+.++.+.||.
T Consensus 99 ~~~--~~~~~~~~~~dvVi~~~~------------------~~~~~~~ln~~c~~~~i-p~i~~~~~G~~G~ 149 (197)
T cd01492 99 DIS--EKPEEFFSQFDVVVATEL------------------SRAELVKINELCRKLGV-KFYATGVHGLFGF 149 (197)
T ss_pred Ccc--ccHHHHHhCCCEEEECCC------------------CHHHHHHHHHHHHHcCC-CEEEEEecCCEEE
Confidence 332 223445678888887754 23334556688999998 5888888776654
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0035 Score=57.66 Aligned_cols=97 Identities=15% Similarity=0.069 Sum_probs=57.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC---EEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH---YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
+.++|.|+||||++|..+++.|.++.| ++..+....+........+.....-++ +. ..+.++|++|.+++..
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~~~~v~~~---~~--~~~~~~Dvvf~a~p~~ 77 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGKSVTVQDA---AE--FDWSQAQLAFFVAGRE 77 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCcceEEEeC---ch--hhccCCCEEEECCCHH
Confidence 568999999999999999999988544 666665443322111111101110121 11 1235789999988631
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccccc
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy 146 (374)
....+...+.+.|+ ++|=.|+..=+
T Consensus 78 -------------------~s~~~~~~~~~~g~-~VIDlS~~fRl 102 (336)
T PRK08040 78 -------------------ASAAYAEEATNAGC-LVIDSSGLFAL 102 (336)
T ss_pred -------------------HHHHHHHHHHHCCC-EEEECChHhcC
Confidence 13455555566776 67777775443
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0022 Score=58.42 Aligned_cols=111 Identities=17% Similarity=0.088 Sum_probs=73.4
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccccccccceeEEeccc---chhhHhhhccCCCEEEEcccccC
Q 017290 28 RISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTEDMFCHEFHLVDLR---VMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~i~~~~~dl~---~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
||.|+|++|.+|++++-.|...+. ++..+++++.......-..... ...+. +.+++.+.++++|+||-+|+...
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~-~~~i~~~~~~~~~~~~~~daDivvitaG~~~ 79 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPT-AASVKGFSGEEGLENALKGADVVVIPAGVPR 79 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCc-CceEEEecCCCchHHHcCCCCEEEEeCCCCC
Confidence 689999999999999999988875 7899998762111000000000 01111 11224567889999999999643
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
. ...+..+....|....+.+.+...+++.+ .+|.+|.
T Consensus 80 ~---~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN 117 (312)
T TIGR01772 80 K---PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN 117 (312)
T ss_pred C---CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 2 23355667888999999999998888755 4555544
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0032 Score=53.81 Aligned_cols=103 Identities=16% Similarity=0.086 Sum_probs=69.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc---------------------------ccccceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE---------------------------DMFCHEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---------------------------~~~~i~~~~~ 76 (374)
...+|+|.| .|-+|+++++.|...|. ++++++...-..... ....++.+..
T Consensus 20 ~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~ 98 (202)
T TIGR02356 20 LNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKE 98 (202)
T ss_pred cCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehh
Confidence 567899999 89999999999999996 889988763110000 0012222333
Q ss_pred cccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCC
Q 017290 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPE 148 (374)
Q Consensus 77 dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~ 148 (374)
.++ .+.+.+.++++|+||.+.. |...-..+-+.|++.++ .+|+.++.+.+|.
T Consensus 99 ~i~-~~~~~~~~~~~D~Vi~~~d------------------~~~~r~~l~~~~~~~~i-p~i~~~~~g~~G~ 150 (202)
T TIGR02356 99 RVT-AENLELLINNVDLVLDCTD------------------NFATRYLINDACVALGT-PLISAAVVGFGGQ 150 (202)
T ss_pred cCC-HHHHHHHHhCCCEEEECCC------------------CHHHHHHHHHHHHHcCC-CEEEEEeccCeEE
Confidence 332 3456677889999999875 33334556788899987 5888877666654
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0027 Score=58.83 Aligned_cols=95 Identities=16% Similarity=0.137 Sum_probs=55.4
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhC-CCE---EEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSE-GHY---IIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~-g~~---V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
|++|.|+||||++|+.+++.|+++ .++ +..+....+........+-.....++.+.+ .++++|++|.+++..
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g~~~~v~~~~~~~----~~~~~Divf~a~~~~ 76 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGGKEGTLQDAFDID----ALKKLDIIITCQGGD 76 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCCCcceEEecCChh----HhcCCCEEEECCCHH
Confidence 478999999999999999966665 565 666554322211111111122233333322 236799999998731
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeecc
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASSA 143 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss~ 143 (374)
.+..+...+.+.|.+ .+|=.||.
T Consensus 77 -------------------~s~~~~~~~~~aG~~~~VID~Ss~ 100 (369)
T PRK06598 77 -------------------YTNEVYPKLRAAGWQGYWIDAAST 100 (369)
T ss_pred -------------------HHHHHHHHHHhCCCCeEEEECChH
Confidence 235566666677763 35545543
|
|
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0025 Score=56.02 Aligned_cols=91 Identities=24% Similarity=0.305 Sum_probs=68.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC--CcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKK--NEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMG 102 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~--~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~ 102 (374)
|+|||.|||+ =|+.|++.|.+.|+ |++..-.+ ............+..+-+.+.+.+...++ +++.||+...++
T Consensus 1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPf- 77 (249)
T PF02571_consen 1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPF- 77 (249)
T ss_pred CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCch-
Confidence 7999999876 48999999999998 55433222 22222222345788888878899999885 899999998764
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCC
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~ 135 (374)
-...+.++.++|++.|++
T Consensus 78 ---------------A~~is~na~~a~~~~~ip 95 (249)
T PF02571_consen 78 ---------------AAEISQNAIEACRELGIP 95 (249)
T ss_pred ---------------HHHHHHHHHHHHhhcCcc
Confidence 345578999999999986
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0037 Score=54.54 Aligned_cols=103 Identities=18% Similarity=0.091 Sum_probs=68.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc---------------------------ccccceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE---------------------------DMFCHEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---------------------------~~~~i~~~~~ 76 (374)
+..+|+|.| .|-+|+++++.|...|. ++++++...-..... ....++.+..
T Consensus 20 ~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~ 98 (228)
T cd00757 20 KNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNE 98 (228)
T ss_pred hCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecc
Confidence 567899999 89999999999999996 777776542110000 0012334444
Q ss_pred cccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCC
Q 017290 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPE 148 (374)
Q Consensus 77 dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~ 148 (374)
.+ +.+.+.++++++|+||.|.. |...-..+-++|.+.++ .+|+.+....+|.
T Consensus 99 ~i-~~~~~~~~~~~~DvVi~~~d------------------~~~~r~~l~~~~~~~~i-p~i~~g~~g~~g~ 150 (228)
T cd00757 99 RL-DAENAEELIAGYDLVLDCTD------------------NFATRYLINDACVKLGK-PLVSGAVLGFEGQ 150 (228)
T ss_pred ee-CHHHHHHHHhCCCEEEEcCC------------------CHHHHHHHHHHHHHcCC-CEEEEEeccCEEE
Confidence 44 23556677789999999976 23333556778899887 6788777655543
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0019 Score=58.99 Aligned_cols=105 Identities=18% Similarity=0.192 Sum_probs=72.5
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCccccccc----------ccceeEEecccchhhHhhhccCCCEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMTEDM----------FCHEFHLVDLRVMDNCLKVTKGVDHV 94 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~----------~~i~~~~~dl~~~~~~~~~~~~~d~v 94 (374)
+||.|+| +|.+|+.++..|+..| ++|.++++++........ ....+.. .+ . +.++++|+|
T Consensus 1 ~kI~IIG-aG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~---~-~~l~~aDIV 72 (306)
T cd05291 1 RKVVIIG-AGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GD---Y-SDCKDADIV 72 (306)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CC---H-HHhCCCCEE
Confidence 4799999 5999999999999998 689999998764221110 0111111 12 1 235799999
Q ss_pred EEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 95 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
|.+++.... ...+..+....|....+.+.+.+++++.+ .+|.+|.
T Consensus 73 Iitag~~~~---~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN 118 (306)
T cd05291 73 VITAGAPQK---PGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN 118 (306)
T ss_pred EEccCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 999986432 22345567788999999999999888755 5555554
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0068 Score=48.63 Aligned_cols=99 Identities=20% Similarity=0.123 Sum_probs=64.6
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc---------------------------ccccceeEEeccc
Q 017290 28 RISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE---------------------------DMFCHEFHLVDLR 79 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---------------------------~~~~i~~~~~dl~ 79 (374)
+|+|.| .|-+|+++++.|...|. ++++++...-..... ....++.+..++.
T Consensus 1 ~VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVG-LGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 589999 59999999999999997 788887553110000 0112333333433
Q ss_pred chhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccC
Q 017290 80 VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147 (374)
Q Consensus 80 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~ 147 (374)
.. .....++++|+||.+.. |......+.++|++.++ .+|..++...++
T Consensus 80 ~~-~~~~~~~~~diVi~~~d------------------~~~~~~~l~~~~~~~~i-~~i~~~~~g~~g 127 (143)
T cd01483 80 ED-NLDDFLDGVDLVIDAID------------------NIAVRRALNRACKELGI-PVIDAGGLGLGG 127 (143)
T ss_pred hh-hHHHHhcCCCEEEECCC------------------CHHHHHHHHHHHHHcCC-CEEEEcCCCcEE
Confidence 32 23556678999999886 34445667789999987 577777755433
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0065 Score=53.31 Aligned_cols=102 Identities=11% Similarity=0.026 Sum_probs=66.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccc-------------------------cc--cceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTED-------------------------MF--CHEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-------------------------~~--~i~~~~~ 76 (374)
...+|+|.| .|-+|+++++.|...|. ++++++...-...... .+ .++.+..
T Consensus 23 ~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~ 101 (240)
T TIGR02355 23 KASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINA 101 (240)
T ss_pred hCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 457899998 79999999999999984 7788776542211110 01 2233332
Q ss_pred cccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccC
Q 017290 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147 (374)
Q Consensus 77 dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~ 147 (374)
.+ +.+.+.++++++|+||.+.. |...-..+-++|.+.++ .+|+.++...+|
T Consensus 102 ~i-~~~~~~~~~~~~DlVvd~~D------------------~~~~r~~ln~~~~~~~i-p~v~~~~~g~~G 152 (240)
T TIGR02355 102 KL-DDAELAALIAEHDIVVDCTD------------------NVEVRNQLNRQCFAAKV-PLVSGAAIRMEG 152 (240)
T ss_pred cC-CHHHHHHHhhcCCEEEEcCC------------------CHHHHHHHHHHHHHcCC-CEEEEEecccEe
Confidence 33 23456667788999998875 34434556688999987 577766655444
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.024 Score=45.42 Aligned_cols=73 Identities=19% Similarity=0.213 Sum_probs=50.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchh-------hHhhhcc--CCCEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD-------NCLKVTK--GVDHVF 95 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~-------~~~~~~~--~~d~vi 95 (374)
+..+|+|-||-|-+|+.+++.+..++|-|.-++...++..... .++.++-.-.+ ++-+.+. +.|.||
T Consensus 2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad~s----I~V~~~~swtEQe~~v~~~vg~sL~gekvDav~ 77 (236)
T KOG4022|consen 2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQADSS----ILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF 77 (236)
T ss_pred CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccccce----EEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence 4478999999999999999999999999999888776544322 22333322111 2222232 789999
Q ss_pred Eccccc
Q 017290 96 NLAADM 101 (374)
Q Consensus 96 ~~a~~~ 101 (374)
..|+-.
T Consensus 78 CVAGGW 83 (236)
T KOG4022|consen 78 CVAGGW 83 (236)
T ss_pred Eeeccc
Confidence 999853
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0032 Score=59.22 Aligned_cols=57 Identities=12% Similarity=0.114 Sum_probs=46.4
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
+.+++|.|+||.|.+|..+++.|.+.||+|++++|++. +...++++++|+||-|...
T Consensus 96 ~~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~--------------------~~~~~~~~~aDlVilavP~ 152 (374)
T PRK11199 96 PDLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW--------------------DRAEDILADAGMVIVSVPI 152 (374)
T ss_pred cccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc--------------------hhHHHHHhcCCEEEEeCcH
Confidence 35689999999999999999999999999999998521 1234456788999998863
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0061 Score=56.16 Aligned_cols=98 Identities=18% Similarity=0.202 Sum_probs=57.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHh-CCCE---EEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKS-EGHY---IIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
.+.++|.|+||||++|+.+++.|.+ ..++ +..+....+........+-....-++ +.+ .++++|++|.+++
T Consensus 3 ~~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~~l~v~~~-~~~----~~~~~Divf~a~~ 77 (347)
T PRK06728 3 EKGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGREIIIQEA-KIN----SFEGVDIAFFSAG 77 (347)
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCcceEEEeC-CHH----HhcCCCEEEECCC
Confidence 3457999999999999999999985 5666 55555443322111111111222222 222 2367999999886
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccccc
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy 146 (374)
.. ....+...+.+.|+ .+|=.||..=+
T Consensus 78 ~~-------------------~s~~~~~~~~~~G~-~VID~Ss~fR~ 104 (347)
T PRK06728 78 GE-------------------VSRQFVNQAVSSGA-IVIDNTSEYRM 104 (347)
T ss_pred hH-------------------HHHHHHHHHHHCCC-EEEECchhhcC
Confidence 31 13455555666775 67766665443
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0014 Score=62.51 Aligned_cols=39 Identities=26% Similarity=0.248 Sum_probs=34.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM 64 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 64 (374)
.+|+|.|+| .|++|..++..|++.||+|+++++++....
T Consensus 2 ~~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~v~ 40 (415)
T PRK11064 2 SFETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHAVD 40 (415)
T ss_pred CccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence 358999998 899999999999999999999999876544
|
|
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0045 Score=56.17 Aligned_cols=83 Identities=17% Similarity=0.139 Sum_probs=54.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGG 103 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~ 103 (374)
++++|.|.||||++|..+++.|.++. .++..+..+... ++.+ ....++++|+||.+.+.-
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~--------------~~~~---~~~~~~~~DvvFlalp~~-- 61 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK--------------DAAA---RRELLNAADVAILCLPDD-- 61 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC--------------cccC---chhhhcCCCEEEECCCHH--
Confidence 46899999999999999999998875 366666544322 1111 123456789999887521
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
....+...+.+.|+ ++|=.|+..
T Consensus 62 -----------------~s~~~~~~~~~~g~-~VIDlSadf 84 (313)
T PRK11863 62 -----------------AAREAVALIDNPAT-RVIDASTAH 84 (313)
T ss_pred -----------------HHHHHHHHHHhCCC-EEEECChhh
Confidence 12344555556676 688777754
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0032 Score=57.62 Aligned_cols=112 Identities=14% Similarity=0.078 Sum_probs=70.1
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccccc---ccc--eeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDM---FCH--EFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~---~~i--~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
||||.|+|+ |.+|..++..|...|. +|+++++++........ ... ......+....++ +.++++|+||.+++
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~ 79 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAG 79 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCC
Confidence 589999997 9999999999998875 99999997653211100 000 0000111111223 34689999999998
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
..... .....+....|+.....+++...+...+ .+|.+|.
T Consensus 80 ~p~~~---~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tN 120 (307)
T PRK06223 80 VPRKP---GMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTN 120 (307)
T ss_pred CCCCc---CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 54321 1223344566888888888888777654 4665554
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.00079 Score=56.62 Aligned_cols=69 Identities=19% Similarity=0.169 Sum_probs=45.4
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
||++.|.| +|.||..+++.|.+.||+|++-+|+.++............ + ......++.+.+|+||....
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~---i-~~~~~~dA~~~aDVVvLAVP 69 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL---I-TGGSNEDAAALADVVVLAVP 69 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc---c-ccCChHHHHhcCCEEEEecc
Confidence 46677665 9999999999999999999999777654332211111110 1 11223456678899998875
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.00062 Score=59.04 Aligned_cols=72 Identities=19% Similarity=0.147 Sum_probs=46.9
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEE---e--cccchhhHhhhccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL---V--DLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~---~--dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|+|.|+||+|.+|+.++..|.+.||+|++.+|++++............. . .+.. ....++++.+|+||-+..
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~-~~~~ea~~~aDvVilavp 77 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG-ADNAEAAKRADVVILAVP 77 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE-eChHHHHhcCCEEEEECC
Confidence 6899999999999999999999999999999886543221110000000 0 0000 112445678899888875
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.008 Score=52.48 Aligned_cols=104 Identities=21% Similarity=0.215 Sum_probs=66.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc----------------------------ccccceeEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE----------------------------DMFCHEFHL 75 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~----------------------------~~~~i~~~~ 75 (374)
...+|+|.| .|-+|+++++.|...|. ++++++...-..... ....++.+.
T Consensus 26 ~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~ 104 (231)
T PRK08328 26 KKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFV 104 (231)
T ss_pred hCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEe
Confidence 457899999 78999999999999995 788887543211000 001222333
Q ss_pred ecccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCC
Q 017290 76 VDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEF 149 (374)
Q Consensus 76 ~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~ 149 (374)
..+ +.+.+.++++++|+||.|.. |...-..+-++|++.++ .+|+.++.+.||.-
T Consensus 105 ~~~-~~~~~~~~l~~~D~Vid~~d------------------~~~~r~~l~~~~~~~~i-p~i~g~~~g~~G~v 158 (231)
T PRK08328 105 GRL-SEENIDEVLKGVDVIVDCLD------------------NFETRYLLDDYAHKKGI-PLVHGAVEGTYGQV 158 (231)
T ss_pred ccC-CHHHHHHHHhcCCEEEECCC------------------CHHHHHHHHHHHHHcCC-CEEEEeeccCEEEE
Confidence 333 23445566778888888875 33323345568889987 68888887777653
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0032 Score=58.42 Aligned_cols=33 Identities=18% Similarity=0.307 Sum_probs=27.8
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG-HYIIASDWK 59 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~ 59 (374)
++|.|+|++|++|+++++.|.+++ .+|..+..+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~ 34 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVAS 34 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEC
Confidence 589999999999999999998876 588777433
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0024 Score=63.95 Aligned_cols=91 Identities=10% Similarity=0.036 Sum_probs=72.2
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhh-ccCCCEEEEcccccCCc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAADMGGM 104 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~~~~~~ 104 (374)
.++|+|.| .|.+|+.+++.|.++|+++++++.+++.....+..+..++.+|.++.+.++++ +++++.+|-+..
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~----- 473 (601)
T PRK03659 400 KPQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCN----- 473 (601)
T ss_pred cCCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeC-----
Confidence 46799998 89999999999999999999999998765555556789999999999988876 368998888875
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCC
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVK 135 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~ 135 (374)
|......++..+++...+
T Consensus 474 -------------d~~~n~~i~~~~r~~~p~ 491 (601)
T PRK03659 474 -------------EPEDTMKIVELCQQHFPH 491 (601)
T ss_pred -------------CHHHHHHHHHHHHHHCCC
Confidence 222334566677776544
|
|
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0057 Score=53.35 Aligned_cols=120 Identities=16% Similarity=0.043 Sum_probs=77.8
Q ss_pred CCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCC---EEEEEeCCCCccc--ccccccceeEEecccchhhHhhhccCCCE
Q 017290 19 EPYWPSEKLRISVTGAGGFIASHIARRLKSEGH---YIIASDWKKNEHM--TEDMFCHEFHLVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 19 ~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~--~~~~~~i~~~~~dl~~~~~~~~~~~~~d~ 93 (374)
.+.....+-||.|.||.|-||+.|...| +... +....+-...+.. +....+-........-.+.++.+++++|+
T Consensus 21 ~~~~~~~~~KVAvlGAaGGIGQPLSLLl-K~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~adv 99 (345)
T KOG1494|consen 21 FSSGSQRGLKVAVLGAAGGIGQPLSLLL-KLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADV 99 (345)
T ss_pred ccccccCcceEEEEecCCccCccHHHHH-hcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCE
Confidence 3334557789999999999999998755 4443 3333343322111 11111112222334446789999999999
Q ss_pred EEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 94 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 94 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
||-=||....+ ....++.+.+|....+.|..++.+.-.+ ++.++|.
T Consensus 100 VvIPAGVPRKP---GMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN 146 (345)
T KOG1494|consen 100 VVIPAGVPRKP---GMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISN 146 (345)
T ss_pred EEecCCCCCCC---CCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence 99999965432 2345678999999999999998887654 5555554
|
|
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0024 Score=58.72 Aligned_cols=106 Identities=14% Similarity=0.062 Sum_probs=65.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccc-------cc------eeEEecccchhhHhhhccCCCE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMF-------CH------EFHLVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------~i------~~~~~dl~~~~~~~~~~~~~d~ 93 (374)
|||.|.| +||+|....-.|.+.||+|++++..+++....... ++ ....+-+.-..++..+++..|+
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~adv 79 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDADV 79 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCCE
Confidence 7899998 99999999999999999999999887642221111 11 0111113334456777888999
Q ss_pred EEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 94 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 94 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
+|-+.+..+. . .-..++.....+++...+.-.+ ++|.+=|
T Consensus 80 ~fIavgTP~~------~---dg~aDl~~V~ava~~i~~~~~~~~vvV~KS 120 (414)
T COG1004 80 VFIAVGTPPD------E---DGSADLSYVEAVAKDIGEILDGKAVVVIKS 120 (414)
T ss_pred EEEEcCCCCC------C---CCCccHHHHHHHHHHHHhhcCCCeEEEEcC
Confidence 9998874321 1 1122455555555554444333 5555444
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0095 Score=52.49 Aligned_cols=102 Identities=15% Similarity=0.107 Sum_probs=66.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc---------------------------ccccceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE---------------------------DMFCHEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---------------------------~~~~i~~~~~ 76 (374)
+..+|+|+|+ |-+|+++++.|...|. ++++++...-..... ....++.+..
T Consensus 31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~ 109 (245)
T PRK05690 31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINA 109 (245)
T ss_pred cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEec
Confidence 5689999995 9999999999999995 788877543111000 0112333444
Q ss_pred cccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccC
Q 017290 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147 (374)
Q Consensus 77 dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~ 147 (374)
.++ .+.+.++++++|+||.+.. |...-..+-++|.+.++ .+|+.++...+|
T Consensus 110 ~i~-~~~~~~~~~~~DiVi~~~D------------------~~~~r~~ln~~~~~~~i-p~v~~~~~g~~G 160 (245)
T PRK05690 110 RLD-DDELAALIAGHDLVLDCTD------------------NVATRNQLNRACFAAKK-PLVSGAAIRMEG 160 (245)
T ss_pred cCC-HHHHHHHHhcCCEEEecCC------------------CHHHHHHHHHHHHHhCC-EEEEeeeccCCc
Confidence 443 3456667789999999975 33333456778889886 577765544443
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0022 Score=57.99 Aligned_cols=38 Identities=18% Similarity=0.252 Sum_probs=33.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
+.+++|.|+| .|.+|..++..|+..||+|+++++++..
T Consensus 3 ~~~~~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~~~~ 40 (286)
T PRK07819 3 DAIQRVGVVG-AGQMGAGIAEVCARAGVDVLVFETTEEL 40 (286)
T ss_pred CCccEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 3456899998 5999999999999999999999998764
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0059 Score=56.06 Aligned_cols=113 Identities=16% Similarity=0.107 Sum_probs=73.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCccccccc---ccceeE--EecccchhhHhhhccCCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDM---FCHEFH--LVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~---~~i~~~--~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
..+||.|+|| |.+|+.++..|...| .+|..+++++........ ...... ...+....+++ .++++|+||.++
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVita 81 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVITA 81 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEECC
Confidence 4579999996 999999999988888 689999987654221000 000000 01111112344 668999999999
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCe-EEEeec
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKR-FFYASS 142 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~-~i~~Ss 142 (374)
+..... .....+....|....+.+.+.+.+...+. +|++|.
T Consensus 82 g~~~~~---g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN 123 (319)
T PTZ00117 82 GVQRKE---EMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN 123 (319)
T ss_pred CCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 864321 22345566778888888888888887654 666655
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0051 Score=56.48 Aligned_cols=111 Identities=17% Similarity=0.052 Sum_probs=72.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc--------c--cccceeEEecccchhhHhhhccCCCE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE--------D--MFCHEFHLVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--------~--~~~i~~~~~dl~~~~~~~~~~~~~d~ 93 (374)
..+||.|+| +|.+|+.++..++..|. +|++++.++...... . ....++.. ..++ +.++++|+
T Consensus 5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~-----~~d~-~~l~~aDi 77 (321)
T PTZ00082 5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG-----TNNY-EDIAGSDV 77 (321)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE-----CCCH-HHhCCCCE
Confidence 457999999 69999999999988885 899999887642110 0 00111111 1123 35789999
Q ss_pred EEEcccccCCcccc--cCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 94 VFNLAADMGGMGFI--QSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 94 vi~~a~~~~~~~~~--~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
||.+++.......+ +-+..+....|+...+.+.+.+.+...+ .+|.+|.
T Consensus 78 VI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN 129 (321)
T PTZ00082 78 VIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN 129 (321)
T ss_pred EEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 99999864321110 0023445667888888888888888766 6777765
|
|
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0078 Score=52.41 Aligned_cols=90 Identities=18% Similarity=0.213 Sum_probs=57.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEE-EEeCCCCccccccc---ccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYII-ASDWKKNEHMTEDM---FCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~-~~~r~~~~~~~~~~---~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
+||||.|.|++|.+|+.+++.+.+.. +++. +++|.++....... .++...-.-+. +++.....++|++|++..
T Consensus 1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~g~~~~gv~v~--~~~~~~~~~~DV~IDFT~ 78 (266)
T COG0289 1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELAGLGLLGVPVT--DDLLLVKADADVLIDFTT 78 (266)
T ss_pred CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhccccccCceee--cchhhcccCCCEEEECCC
Confidence 46899999999999999999999874 6654 56666553321100 01111011111 113444568999999986
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~ 135 (374)
+. ++...++.|.+++++
T Consensus 79 P~-------------------~~~~~l~~~~~~~~~ 95 (266)
T COG0289 79 PE-------------------ATLENLEFALEHGKP 95 (266)
T ss_pred ch-------------------hhHHHHHHHHHcCCC
Confidence 42 356778888888864
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0096 Score=54.10 Aligned_cols=101 Identities=16% Similarity=0.110 Sum_probs=67.7
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc---------------------------ccccceeEEeccc
Q 017290 28 RISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE---------------------------DMFCHEFHLVDLR 79 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---------------------------~~~~i~~~~~dl~ 79 (374)
+|||+| .|-+|.++++.|...|. ++++++...-..... ....++.+..++.
T Consensus 1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 589999 59999999999999995 788887653211110 0113444555665
Q ss_pred chhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCC
Q 017290 80 VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPE 148 (374)
Q Consensus 80 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~ 148 (374)
+.....+.++++|+||.+.. |...-..+-+.|.+.++ .+|..++.+.+|.
T Consensus 80 ~~~~~~~f~~~~DvVv~a~D------------------n~~ar~~in~~c~~~~i-p~I~~gt~G~~G~ 129 (312)
T cd01489 80 DPDFNVEFFKQFDLVFNALD------------------NLAARRHVNKMCLAADV-PLIESGTTGFLGQ 129 (312)
T ss_pred CccchHHHHhcCCEEEECCC------------------CHHHHHHHHHHHHHCCC-CEEEEecCcceeE
Confidence 43333456778888888864 44445566778888887 5888777766654
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.01 Score=55.35 Aligned_cols=102 Identities=17% Similarity=0.069 Sum_probs=68.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc---------------------------ccccceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE---------------------------DMFCHEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---------------------------~~~~i~~~~~ 76 (374)
+..+|+|+| .|-+|+++++.|...|. ++++++...-..... ....++.+..
T Consensus 27 ~~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~ 105 (355)
T PRK05597 27 FDAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVR 105 (355)
T ss_pred hCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEe
Confidence 557899999 69999999999999995 788887654111100 0113344444
Q ss_pred cccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccC
Q 017290 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147 (374)
Q Consensus 77 dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~ 147 (374)
.++ .+...++++++|+||.+.. |...-..+-++|.+.++ .+|+.++.+.+|
T Consensus 106 ~i~-~~~~~~~~~~~DvVvd~~d------------------~~~~r~~~n~~c~~~~i-p~v~~~~~g~~g 156 (355)
T PRK05597 106 RLT-WSNALDELRDADVILDGSD------------------NFDTRHLASWAAARLGI-PHVWASILGFDA 156 (355)
T ss_pred ecC-HHHHHHHHhCCCEEEECCC------------------CHHHHHHHHHHHHHcCC-CEEEEEEecCeE
Confidence 443 3455667789999999985 33333445678999987 588877655554
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0057 Score=58.15 Aligned_cols=162 Identities=14% Similarity=0.118 Sum_probs=98.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhC-------CC--EEEEEeCCCCcccccc----c------ccceeEEecccchhhHh
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSE-------GH--YIIASDWKKNEHMTED----M------FCHEFHLVDLRVMDNCL 85 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~~~----~------~~i~~~~~dl~~~~~~~ 85 (374)
+.-||.|+|++|.+|.+++-.|+.. +. ++..++++........ . ..+.+..+ + .
T Consensus 99 ~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~---~----y 171 (444)
T PLN00112 99 KLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID---P----Y 171 (444)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC---C----H
Confidence 3578999999999999999999887 54 7888888776422110 0 01111111 2 2
Q ss_pred hhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHh-CCCC-eEEEeeccc---ccCCCcccccccCCCC
Q 017290 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRI-SGVK-RFFYASSAC---IYPEFKQLETNVSLKE 160 (374)
Q Consensus 86 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~-~~~~-~~i~~Ss~~---vy~~~~~~~~~~~~~e 160 (374)
+.++++|+||-.||.... ...+..+..+.|....+.+.....+ ++.. .+|.+|... .|- ..+
T Consensus 172 e~~kdaDiVVitAG~prk---pG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v----------~~k 238 (444)
T PLN00112 172 EVFQDAEWALLIGAKPRG---PGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALI----------CLK 238 (444)
T ss_pred HHhCcCCEEEECCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHH----------HHH
Confidence 457899999999996432 2335566788899999999999988 5654 555555411 000 011
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCC
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFG 207 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~ 207 (374)
....+. ....-..+.+..-++-...++..+++...++-..|+|.++
T Consensus 239 ~sg~~~-~rViGtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHG 284 (444)
T PLN00112 239 NAPNIP-AKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHS 284 (444)
T ss_pred HcCCCC-cceEEeeccHHHHHHHHHHHHHhCcCHHHcccceEEecCC
Confidence 110011 1222223344444444445566677777777777888875
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0032 Score=62.65 Aligned_cols=72 Identities=8% Similarity=-0.038 Sum_probs=60.5
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhc-cCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT-KGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~-~~~d~vi~~a~ 99 (374)
-+|+|.| .|.+|+++++.|.++|++|++++.++++.......+..++.+|.++++.++++- +++|.++-+..
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~ 490 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIP 490 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcC
Confidence 5689998 899999999999999999999999887655555567899999999999887654 68888776654
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0083 Score=54.20 Aligned_cols=111 Identities=16% Similarity=0.103 Sum_probs=72.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCcccccc---cccceeE--EecccchhhHhhhccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMTED---MFCHEFH--LVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~---~~~i~~~--~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
+||.|+|+ |.||+.++-.|+..+ .++..++.......... .....+. ...+....+ -+.++++|+|+-.||
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~-y~~~~~aDiVvitAG 78 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGD-YEDLKGADIVVITAG 78 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCC-hhhhcCCCEEEEeCC
Confidence 68999998 999999999997774 48999998843221110 0000000 011111111 345779999999998
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
....+ .....+.+..|....+.+.....+.+.+-++.+-|
T Consensus 79 ~prKp---GmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt 118 (313)
T COG0039 79 VPRKP---GMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT 118 (313)
T ss_pred CCCCC---CCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence 65432 23456678889999999999998888664444444
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0037 Score=51.53 Aligned_cols=57 Identities=18% Similarity=0.167 Sum_probs=47.9
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
....++|+|+|+++.+|..+++.|.+.|.+|+++.|.. +++.+.++++|+||.+.+.
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~---------------------~~l~~~l~~aDiVIsat~~ 97 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT---------------------KNLKEHTKQADIVIVAVGK 97 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc---------------------hhHHHHHhhCCEEEEcCCC
Confidence 45779999999877889999999999999999988762 3456678899999999874
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.05 Score=52.49 Aligned_cols=88 Identities=19% Similarity=0.232 Sum_probs=62.3
Q ss_pred CCCeEEEEcCc---chhHHHHHHHHHhCCC--EEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAG---GFIASHIARRLKSEGH--YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGat---G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
.+++|.|+|++ |.+|..+++.|++.|| +|+.+..+.... ..+.-...+.++-..+|.+|-+..
T Consensus 6 ~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~~i------------~G~~~~~sl~~lp~~~Dlavi~vp 73 (447)
T TIGR02717 6 NPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGEI------------LGVKAYPSVLEIPDPVDLAVIVVP 73 (447)
T ss_pred CCCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCCcc------------CCccccCCHHHCCCCCCEEEEecC
Confidence 45889999998 7899999999999998 677666443211 112223344455567898887764
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecc
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~ 143 (374)
. ..+..+++.|.+.|++.+|.+|+.
T Consensus 74 ~-------------------~~~~~~l~e~~~~gv~~~vi~s~g 98 (447)
T TIGR02717 74 A-------------------KYVPQVVEECGEKGVKGAVVITAG 98 (447)
T ss_pred H-------------------HHHHHHHHHHHhcCCCEEEEECCC
Confidence 2 234677888889999999888874
|
Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff. |
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0035 Score=59.05 Aligned_cols=68 Identities=15% Similarity=0.152 Sum_probs=54.1
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
|++|+|+|| |++|+.++..+.+.|++|++++.++....... .-..+.+|+.|.+.+.++.+.+|+|..
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~--ad~~~~~~~~D~~~l~~~a~~~dvit~ 69 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV--ADEVIVADYDDVAALRELAEQCDVITY 69 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh--CceEEecCCCCHHHHHHHHhcCCEEEe
Confidence 578999995 89999999999999999999997765432211 124566889999999999999998753
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.017 Score=49.64 Aligned_cols=103 Identities=22% Similarity=0.225 Sum_probs=66.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc--------------------------ccccceeEEec
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE--------------------------DMFCHEFHLVD 77 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--------------------------~~~~i~~~~~d 77 (374)
...+|+|.| .|-+|+++++.|...|. ++++++...-..... ....++.+...
T Consensus 27 ~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~ 105 (212)
T PRK08644 27 KKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEK 105 (212)
T ss_pred hCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeee
Confidence 567899999 69999999999999996 588888763110000 00123333333
Q ss_pred ccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhC-CCCeEEEeecccccCC
Q 017290 78 LRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRIS-GVKRFFYASSACIYPE 148 (374)
Q Consensus 78 l~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~i~~Ss~~vy~~ 148 (374)
+++ +.+.+.++++|+||.|.. |...-..+.+.|.+. ++ .+|+.+...-|+.
T Consensus 106 i~~-~~~~~~~~~~DvVI~a~D------------------~~~~r~~l~~~~~~~~~~-p~I~~~~~~~~~~ 157 (212)
T PRK08644 106 IDE-DNIEELFKDCDIVVEAFD------------------NAETKAMLVETVLEHPGK-KLVAASGMAGYGD 157 (212)
T ss_pred cCH-HHHHHHHcCCCEEEECCC------------------CHHHHHHHHHHHHHhCCC-CEEEeehhhccCC
Confidence 332 445567788999998854 344445667788887 76 5777766555544
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0038 Score=56.51 Aligned_cols=73 Identities=18% Similarity=0.175 Sum_probs=48.8
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc----------ccceeE--------EecccchhhHhhh
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM----------FCHEFH--------LVDLRVMDNCLKV 87 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----------~~i~~~--------~~dl~~~~~~~~~ 87 (374)
.++|.|+| +|.+|..++..|+..|++|+++++++........ ...... ...+.-..++.++
T Consensus 3 ~~kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a 81 (287)
T PRK08293 3 IKNVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEA 81 (287)
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHH
Confidence 47899998 6999999999999999999999988653211100 000000 0111122345667
Q ss_pred ccCCCEEEEccc
Q 017290 88 TKGVDHVFNLAA 99 (374)
Q Consensus 88 ~~~~d~vi~~a~ 99 (374)
++++|+||-+..
T Consensus 82 ~~~aDlVieavp 93 (287)
T PRK08293 82 VKDADLVIEAVP 93 (287)
T ss_pred hcCCCEEEEecc
Confidence 789999999985
|
|
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0065 Score=55.56 Aligned_cols=103 Identities=17% Similarity=0.114 Sum_probs=68.6
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCcccc----ccc-----ccceeEEecccchhhHhhhccCCCEEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMT----EDM-----FCHEFHLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~-----~~i~~~~~dl~~~~~~~~~~~~~d~vi 95 (374)
|||.|.|+ |.+|..++..|+..| ++|.+++++...... ... ....+..+ + . +.++++|+||
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d---~-~~l~~aDiVi 72 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---D---Y-ADCKGADVVV 72 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---C---H-HHhCCCCEEE
Confidence 58999996 999999999999998 689999998653221 000 01111111 1 2 3478999999
Q ss_pred EcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEe
Q 017290 96 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYA 140 (374)
Q Consensus 96 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~ 140 (374)
.+++.... ...+..+....|+...+.+.+.+.+.+.+-++.+
T Consensus 73 ita~~~~~---~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv 114 (308)
T cd05292 73 ITAGANQK---PGETRLDLLKRNVAIFKEIIPQILKYAPDAILLV 114 (308)
T ss_pred EccCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 99986431 1223344566788888888888888775533433
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0044 Score=59.22 Aligned_cols=73 Identities=16% Similarity=0.192 Sum_probs=48.9
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeE-------------EecccchhhHhhhccCCCE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFH-------------LVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~-------------~~dl~~~~~~~~~~~~~d~ 93 (374)
|+|.|.| .|++|..++..|.+.||+|+++++++............+. .+.+.-..+..++++++|+
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv 79 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV 79 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence 5799998 8999999999999999999999998764332211000000 0112212234456778999
Q ss_pred EEEcccc
Q 017290 94 VFNLAAD 100 (374)
Q Consensus 94 vi~~a~~ 100 (374)
||-|.+.
T Consensus 80 vii~vpt 86 (411)
T TIGR03026 80 IIICVPT 86 (411)
T ss_pred EEEEeCC
Confidence 9999874
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0034 Score=60.24 Aligned_cols=67 Identities=21% Similarity=0.295 Sum_probs=47.8
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-ccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
|+|+|+||+|.+|..+++.|.+.|++|++++|++...... ...++.+ .....+.+.++|+||-+...
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-------~~~~~e~~~~aDvVIlavp~ 68 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-------ANDNIDAAKDADIVIISVPI 68 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-------ccCHHHHhccCCEEEEecCH
Confidence 6899999999999999999999999999999886542111 1112211 12234456788999988763
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0061 Score=55.19 Aligned_cols=98 Identities=12% Similarity=0.039 Sum_probs=57.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCccccc--ccccce---eEEecccchhhHhhhccCCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTE--DMFCHE---FHLVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~--~~~~i~---~~~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
+|+||.|.||+||.|.+|++.|..+. .++..++.+....... ..+... -......+.+.+ ..++||+||.+.
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~--~~~~~DvvFlal 78 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI--ELDECDVVFLAL 78 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccccccccccccCChhhh--hcccCCEEEEec
Confidence 47899999999999999999999884 5776665444221111 011111 011111122222 345799999987
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
..-. ...++......++ ++|=+|+..
T Consensus 79 Phg~-------------------s~~~v~~l~~~g~-~VIDLSadf 104 (349)
T COG0002 79 PHGV-------------------SAELVPELLEAGC-KVIDLSADF 104 (349)
T ss_pred Cchh-------------------HHHHHHHHHhCCC-eEEECCccc
Confidence 6310 2344555555666 488777753
|
|
| >PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.012 Score=45.24 Aligned_cols=85 Identities=18% Similarity=0.241 Sum_probs=53.8
Q ss_pred CeEEEEcCc---chhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCC
Q 017290 27 LRISVTGAG---GFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGG 103 (374)
Q Consensus 27 ~~ilItGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~ 103 (374)
|+|.|+|++ +..|..+++.|.+.||+|+.+.-+..... + ......+.+.-..+|.++.+...
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~i~-----G-------~~~y~sl~e~p~~iDlavv~~~~--- 65 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGEIL-----G-------IKCYPSLAEIPEPIDLAVVCVPP--- 65 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSEET-----T-------EE-BSSGGGCSST-SEEEE-S-H---
T ss_pred CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceEEC-----c-------EEeeccccCCCCCCCEEEEEcCH---
Confidence 579999988 78999999999999999999875542211 1 11223333323578988888752
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
..+..+++.|.+.|++.+++.++
T Consensus 66 ----------------~~~~~~v~~~~~~g~~~v~~~~g 88 (116)
T PF13380_consen 66 ----------------DKVPEIVDEAAALGVKAVWLQPG 88 (116)
T ss_dssp ----------------HHHHHHHHHHHHHT-SEEEE-TT
T ss_pred ----------------HHHHHHHHHHHHcCCCEEEEEcc
Confidence 33567788888889988888877
|
|
| >COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.015 Score=50.27 Aligned_cols=96 Identities=17% Similarity=0.147 Sum_probs=67.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMG 102 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~ 102 (374)
++|+|+|.|||+ =++.|++.|...+..+++.+-...... +.......+.+-..+.+.+.+.++ ++|.||+...++
T Consensus 1 ~~~~ilvlGGT~-Dar~la~~L~~~~~~~~~ss~t~~g~~-l~~~~~~~~~~G~l~~e~l~~~l~e~~i~llIDATHPy- 77 (257)
T COG2099 1 SMMRILLLGGTS-DARALAKKLAAAPVDIILSSLTGYGAK-LAEQIGPVRVGGFLGAEGLAAFLREEGIDLLIDATHPY- 77 (257)
T ss_pred CCceEEEEeccH-HHHHHHHHhhccCccEEEEEccccccc-chhccCCeeecCcCCHHHHHHHHHHcCCCEEEECCChH-
Confidence 368899999886 479999999988855554443322211 111112356667778888888886 899999998764
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEE
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i 138 (374)
-...+.|.+++|++.|++.+-
T Consensus 78 ---------------Aa~iS~Na~~aake~gipy~r 98 (257)
T COG2099 78 ---------------AARISQNAARAAKETGIPYLR 98 (257)
T ss_pred ---------------HHHHHHHHHHHHHHhCCcEEE
Confidence 355678999999999986444
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.017 Score=51.71 Aligned_cols=102 Identities=14% Similarity=0.050 Sum_probs=65.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc---------------------------ccccceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE---------------------------DMFCHEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---------------------------~~~~i~~~~~ 76 (374)
...+|+|+| .|-+|+++++.|...|. ++++++...-..... ....++.+..
T Consensus 26 ~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~ 104 (287)
T PRK08223 26 RNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPE 104 (287)
T ss_pred hcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence 467899999 78999999999999985 777777553211100 0113344444
Q ss_pred cccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccc
Q 017290 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145 (374)
Q Consensus 77 dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~v 145 (374)
.++ .+.+.++++++|+||++.-.. ++..-..+-++|.+.++ -+|+.|....
T Consensus 105 ~l~-~~n~~~ll~~~DlVvD~~D~~----------------~~~~r~~ln~~c~~~~i-P~V~~~~~g~ 155 (287)
T PRK08223 105 GIG-KENADAFLDGVDVYVDGLDFF----------------EFDARRLVFAACQQRGI-PALTAAPLGM 155 (287)
T ss_pred ccC-ccCHHHHHhCCCEEEECCCCC----------------cHHHHHHHHHHHHHcCC-CEEEEeccCC
Confidence 443 345667788899998776411 12333456678999997 5777655433
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0053 Score=61.65 Aligned_cols=73 Identities=19% Similarity=0.163 Sum_probs=62.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhh-ccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~ 99 (374)
.++|+|.| .|.+|+.+++.|.++|+++++++.++.+....+..+..++.+|.++.+.++++ +++++.+|-+..
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeC
Confidence 46899998 89999999999999999999999998876555556789999999999988764 368898888765
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.012 Score=53.84 Aligned_cols=54 Identities=17% Similarity=0.209 Sum_probs=44.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
..|+|.|.| +|.+|+.++..|.+.||+|++.+|+.. .++.++++++|+||.+..
T Consensus 3 ~~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~~--------------------~~~~~~~~~advvi~~vp 56 (308)
T PRK14619 3 QPKTIAILG-AGAWGSTLAGLASANGHRVRVWSRRSG--------------------LSLAAVLADADVIVSAVS 56 (308)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCCC--------------------CCHHHHHhcCCEEEEECC
Confidence 457899998 899999999999999999999998753 123455678899988875
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.01 Score=53.64 Aligned_cols=81 Identities=15% Similarity=0.126 Sum_probs=53.5
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCcc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMG 105 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~ 105 (374)
-+|.|.|++||.|.++++.|..+. .++..+..... .+. .+..++++++|++|.+.+.-
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~--------------~~~---~~~~~~~~~~D~vFlalp~~---- 60 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR--------------KDA---AERAKLLNAADVAILCLPDD---- 60 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc--------------cCc---CCHhHhhcCCCEEEECCCHH----
Confidence 479999999999999999998874 46666653322 001 11234556899999887521
Q ss_pred cccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 106 FIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 106 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
....++..+.+.|+ ++|=.|+..
T Consensus 61 ---------------~s~~~~~~~~~~g~-~VIDlSadf 83 (310)
T TIGR01851 61 ---------------AAREAVSLVDNPNT-CIIDASTAY 83 (310)
T ss_pred ---------------HHHHHHHHHHhCCC-EEEECChHH
Confidence 12344555556676 688787753
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.018 Score=47.83 Aligned_cols=100 Identities=16% Similarity=0.124 Sum_probs=63.8
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCC---Cccc----------c-------------cccccceeEEecccc
Q 017290 28 RISVTGAGGFIASHIARRLKSEGH-YIIASDWKK---NEHM----------T-------------EDMFCHEFHLVDLRV 80 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~---~~~~----------~-------------~~~~~i~~~~~dl~~ 80 (374)
+|+|.| .|-+|+++++.|...|. ++++++... +... . ....+++.+...++.
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~ 79 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE 79 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence 589999 69999999999999997 688888764 1100 0 001123333344433
Q ss_pred hhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhC-CCCeEEEeecccccCC
Q 017290 81 MDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRIS-GVKRFFYASSACIYPE 148 (374)
Q Consensus 81 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~i~~Ss~~vy~~ 148 (374)
+.+.+.++++|+||.+.. |...-..+.+.+.+. ++ .+|+.+....|+.
T Consensus 80 -~~~~~~l~~~DlVi~~~d------------------~~~~r~~i~~~~~~~~~i-p~i~~~~~~~~~~ 128 (174)
T cd01487 80 -NNLEGLFGDCDIVVEAFD------------------NAETKAMLAESLLGNKNK-PVVCASGMAGFGD 128 (174)
T ss_pred -hhHHHHhcCCCEEEECCC------------------CHHHHHHHHHHHHHHCCC-CEEEEehhhccCC
Confidence 456677889999999854 333334566776666 76 5776665555544
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0038 Score=59.37 Aligned_cols=162 Identities=11% Similarity=0.043 Sum_probs=96.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhC---CC----EEEEEeCCCCccccc---------c---cccceeEEecccchhhHh
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSE---GH----YIIASDWKKNEHMTE---------D---MFCHEFHLVDLRVMDNCL 85 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~---g~----~V~~~~r~~~~~~~~---------~---~~~i~~~~~dl~~~~~~~ 85 (374)
.+-+|+||||+|.||.+|+-.+.+- |. .++.++......... . ...+.+. . ...
T Consensus 122 ~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~------~~~ 194 (452)
T cd05295 122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T------DLD 194 (452)
T ss_pred CceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E------CCH
Confidence 3478999999999999999998763 42 355566632211100 0 0012222 1 124
Q ss_pred hhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCC--CeEEEeeccc----ccCCCcccccccCCC
Q 017290 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV--KRFFYASSAC----IYPEFKQLETNVSLK 159 (374)
Q Consensus 86 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~--~~~i~~Ss~~----vy~~~~~~~~~~~~~ 159 (374)
+.++++|+||-+++.... ...+..+....|....+.+..+..+++. .+++.+.|-- +|- ..
T Consensus 195 ea~~daDvvIitag~prk---~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i----------~~ 261 (452)
T cd05295 195 VAFKDAHVIVLLDDFLIK---EGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSI----------LI 261 (452)
T ss_pred HHhCCCCEEEECCCCCCC---cCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHH----------HH
Confidence 567899999999996432 2335566788899999999999888775 4666666410 000 00
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFG 207 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~ 207 (374)
...+ ...+....+.+.+..-++....++..+++...++-..|+|.++
T Consensus 262 k~ap-giP~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG 308 (452)
T cd05295 262 KYAP-SIPRKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIG 308 (452)
T ss_pred HHcC-CCCHHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccC
Confidence 1110 1122334444445534444445666788878887778888865
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.008 Score=53.67 Aligned_cols=110 Identities=17% Similarity=0.094 Sum_probs=71.9
Q ss_pred EEEEcCcchhHHHHHHHHHhCC----CEEEEEeCCCCcccccccc---ccee-EEecccchhhHhhhccCCCEEEEcccc
Q 017290 29 ISVTGAGGFIASHIARRLKSEG----HYIIASDWKKNEHMTEDMF---CHEF-HLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 29 ilItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~---~i~~-~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
|.|+||+|.+|..++..|+..| .+|..+++++......... -... ....+...++..+.++++|+||..++.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~ 80 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV 80 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence 5799998999999999999988 7899999877542211000 0000 012222233445678899999999986
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEee
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYAS 141 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~S 141 (374)
... ...........|+...+.+.+.+++...+ .+|..|
T Consensus 81 ~~~---~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t 119 (263)
T cd00650 81 GRK---PGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS 119 (263)
T ss_pred CCC---cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 432 12233445667888888899888887754 455443
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.024 Score=50.40 Aligned_cols=98 Identities=17% Similarity=0.109 Sum_probs=62.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcccccc-------------------------cc--cceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTED-------------------------MF--CHEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~-------------------------~~--~i~~~~~ 76 (374)
+..+|+|.| .|-+|+++++.|...| .++++++...-...... .+ .++.+.
T Consensus 29 ~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~- 106 (268)
T PRK15116 29 ADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD- 106 (268)
T ss_pred cCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe-
Confidence 567899998 7999999999999999 58888876532111000 01 122221
Q ss_pred cccchhhHhhhcc-CCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecc
Q 017290 77 DLRVMDNCLKVTK-GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143 (374)
Q Consensus 77 dl~~~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~ 143 (374)
+..+.+.+.+++. ++|+||.+.. ++..-..|.++|++.++ .+|..+++
T Consensus 107 ~~i~~e~~~~ll~~~~D~VIdaiD------------------~~~~k~~L~~~c~~~~i-p~I~~gGa 155 (268)
T PRK15116 107 DFITPDNVAEYMSAGFSYVIDAID------------------SVRPKAALIAYCRRNKI-PLVTTGGA 155 (268)
T ss_pred cccChhhHHHHhcCCCCEEEEcCC------------------CHHHHHHHHHHHHHcCC-CEEEECCc
Confidence 2223444555553 6888888876 33334567889999987 46655443
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.018 Score=50.22 Aligned_cols=101 Identities=10% Similarity=-0.024 Sum_probs=65.7
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc---------------------------ccccceeEEeccc
Q 017290 28 RISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE---------------------------DMFCHEFHLVDLR 79 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---------------------------~~~~i~~~~~dl~ 79 (374)
+|||.| .|-+|.++++.|...|. ++++++...-..... ...+++.+..++.
T Consensus 1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~ 79 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG 79 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence 589998 79999999999999985 778877653211100 0012344445553
Q ss_pred chhhH-hhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCC
Q 017290 80 VMDNC-LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPE 148 (374)
Q Consensus 80 ~~~~~-~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~ 148 (374)
+.... ...++++|+||.+.. |+..-..+-+.|.+.++ .+|..++.+.+|.
T Consensus 80 ~~~~~~~~f~~~~DvVi~a~D------------------n~~aR~~ln~~c~~~~i-plI~~g~~G~~G~ 130 (234)
T cd01484 80 PEQDFNDTFFEQFHIIVNALD------------------NIIARRYVNGMLIFLIV-PLIESGTEGFKGN 130 (234)
T ss_pred hhhhchHHHHhCCCEEEECCC------------------CHHHHHHHHHHHHHcCC-CEEEEcccCCceE
Confidence 32222 345678888888864 55555667788888886 5777777665554
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.008 Score=54.92 Aligned_cols=112 Identities=13% Similarity=0.103 Sum_probs=71.6
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCcccccc---cccceeEE-ecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMTED---MFCHEFHL-VDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~---~~~i~~~~-~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
.+||.|+|+ |.+|+.++-.|+..| -++..++.++....... .....+.. ..+....+++ .++++|+||-+|+
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~-~~~~adivvitaG 80 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYS-VTANSKVVIVTAG 80 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHH-HhCCCCEEEECCC
Confidence 469999995 999999999998876 47999998764311100 00000000 0111111223 3689999999999
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
.... ...+..+.+..|....+.+.+.+++++.+ .+|.+|.
T Consensus 81 ~~~k---~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN 121 (312)
T cd05293 81 ARQN---EGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSN 121 (312)
T ss_pred CCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccC
Confidence 6532 12344567788999999999999888755 4555553
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0026 Score=53.20 Aligned_cols=100 Identities=13% Similarity=0.104 Sum_probs=58.2
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc------------cc-----ceeEEecccchhhHhhhccC
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM------------FC-----HEFHLVDLRVMDNCLKVTKG 90 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------------~~-----i~~~~~dl~~~~~~~~~~~~ 90 (374)
+|.|+|+ |.+|+.++..++..|++|++++++++....... .. ..-....+.-..++.++. +
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~-~ 78 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAV-D 78 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGC-T
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHh-h
Confidence 6899995 999999999999999999999998753211000 00 000011111122344455 8
Q ss_pred CCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccccc
Q 017290 91 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy 146 (374)
+|.||-+..- +...-+.++....+.-.+..|+.|+++.+
T Consensus 79 adlViEai~E-----------------~l~~K~~~~~~l~~~~~~~~ilasnTSsl 117 (180)
T PF02737_consen 79 ADLVIEAIPE-----------------DLELKQELFAELDEICPPDTILASNTSSL 117 (180)
T ss_dssp ESEEEE-S-S-----------------SHHHHHHHHHHHHCCS-TTSEEEE--SSS
T ss_pred hheehhhccc-----------------cHHHHHHHHHHHHHHhCCCceEEecCCCC
Confidence 8999998752 45555677776666544456666665544
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.022 Score=49.58 Aligned_cols=97 Identities=14% Similarity=0.063 Sum_probs=60.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc---------------------------ccccceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE---------------------------DMFCHEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---------------------------~~~~i~~~~~ 76 (374)
+..+|+|.| .|-+|+++++.|...|. ++++++...-..... ....++.+..
T Consensus 10 ~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~ 88 (231)
T cd00755 10 RNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE 88 (231)
T ss_pred hCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee
Confidence 457899999 79999999999999985 788877543110000 0012233333
Q ss_pred cccchhhHhhhc-cCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 77 DLRVMDNCLKVT-KGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 77 dl~~~~~~~~~~-~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
.++ .+.+..++ .++|+||.+.. +...-..+.++|++.++ .+|...+
T Consensus 89 ~i~-~~~~~~l~~~~~D~VvdaiD------------------~~~~k~~L~~~c~~~~i-p~I~s~g 135 (231)
T cd00755 89 FLT-PDNSEDLLGGDPDFVVDAID------------------SIRAKVALIAYCRKRKI-PVISSMG 135 (231)
T ss_pred ecC-HhHHHHHhcCCCCEEEEcCC------------------CHHHHHHHHHHHHHhCC-CEEEEeC
Confidence 332 23444444 36899998875 34445667889999987 4554433
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0069 Score=55.40 Aligned_cols=74 Identities=16% Similarity=0.104 Sum_probs=49.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-----------cccce--eEEecccchhhHhhhccCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-----------MFCHE--FHLVDLRVMDNCLKVTKGV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~i~--~~~~dl~~~~~~~~~~~~~ 91 (374)
..++|.|+| +|.+|+.++..|+..|++|++.++++....... ..+.. .....+.-..++.++++++
T Consensus 6 ~i~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~a 84 (321)
T PRK07066 6 DIKTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADA 84 (321)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCC
Confidence 457899998 699999999999999999999999865321100 00000 0001122223466778899
Q ss_pred CEEEEccc
Q 017290 92 DHVFNLAA 99 (374)
Q Consensus 92 d~vi~~a~ 99 (374)
|.||-+..
T Consensus 85 DlViEavp 92 (321)
T PRK07066 85 DFIQESAP 92 (321)
T ss_pred CEEEECCc
Confidence 99999875
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0037 Score=56.45 Aligned_cols=71 Identities=14% Similarity=0.080 Sum_probs=51.3
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
....++|+|+|. |.+|+.+++.|...|.+|++.+|++.+.......+... ...+++.+.++++|+||++..
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~-----~~~~~l~~~l~~aDiVint~P 218 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIP-----FPLNKLEEKVAEIDIVINTIP 218 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCee-----ecHHHHHHHhccCCEEEECCC
Confidence 446789999995 88999999999999999999999865422111111111 123456677889999999874
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0026 Score=51.72 Aligned_cols=74 Identities=15% Similarity=0.054 Sum_probs=49.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCccccccc-ccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDM-FCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~-~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
...++|+|+|+ |.+|..+++.|.+.| ++|++++|+..+...... .+...+..+..+ ..+.++++|+||.+....
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dvvi~~~~~~ 92 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADLIINTTPVG 92 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCEEEeCcCCC
Confidence 45689999996 999999999999985 899999998654322111 111111122222 334467899999999753
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.017 Score=54.66 Aligned_cols=103 Identities=15% Similarity=0.158 Sum_probs=68.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc-------------------------cc--ccceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE-------------------------DM--FCHEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-------------------------~~--~~i~~~~~ 76 (374)
+..+|||+| .|-+|+++++.|...|. ++++++...-..... .. ..++.+..
T Consensus 41 ~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~ 119 (392)
T PRK07878 41 KNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEF 119 (392)
T ss_pred hcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEec
Confidence 467899999 78999999999999986 677777543110000 00 12333444
Q ss_pred cccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCC
Q 017290 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPE 148 (374)
Q Consensus 77 dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~ 148 (374)
.++ .+...++++++|+||.|.. |...-..+-++|.+.++ .+|+.+....+|.
T Consensus 120 ~i~-~~~~~~~~~~~D~Vvd~~d------------------~~~~r~~ln~~~~~~~~-p~v~~~~~g~~G~ 171 (392)
T PRK07878 120 RLD-PSNAVELFSQYDLILDGTD------------------NFATRYLVNDAAVLAGK-PYVWGSIYRFEGQ 171 (392)
T ss_pred cCC-hhHHHHHHhcCCEEEECCC------------------CHHHHHHHHHHHHHcCC-CEEEEEeccCEEE
Confidence 443 3345667788999998875 34333445678899887 5888887766664
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.018 Score=53.46 Aligned_cols=111 Identities=14% Similarity=0.131 Sum_probs=71.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCccccccc---ccceeE-EecccchhhHhhhccCCCEEEEcccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTEDM---FCHEFH-LVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~---~~i~~~-~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
+||.|+|+ |.+|+.++-.|+..+. ++..++.++........ ....+. ...+....++. .++++|+||-+||.
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy~-~~~daDiVVitAG~ 115 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDYA-VTAGSDLCIVTAGA 115 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCHH-HhCCCCEEEECCCC
Confidence 69999995 9999999999988874 79999987643211100 000000 01111111122 37899999999996
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
.... ..+..+....|+...+.+.+...+++.+ .+|.+|.
T Consensus 116 ~~k~---g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtN 155 (350)
T PLN02602 116 RQIP---GESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSN 155 (350)
T ss_pred CCCc---CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 4321 2344567778998899999998888755 5555553
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.011 Score=53.85 Aligned_cols=111 Identities=17% Similarity=0.042 Sum_probs=69.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccc----ccc-ceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTED----MFC-HEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~----~~~-i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
|||.|.|+ |++|..++..|+..|+ +|++++..+....... ... .......+.-..++.+ ++++|+||-+++.
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~ 79 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGL 79 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCC
Confidence 68999995 9999999999999886 8999998654211000 000 0000111211122333 5789999999985
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
.... ..+..+....|......+++...+++.+ .+|.+|.
T Consensus 80 p~~~---~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN 119 (305)
T TIGR01763 80 PRKP---GMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN 119 (305)
T ss_pred CCCc---CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 4321 1223345667898899998888777644 4555554
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.012 Score=55.11 Aligned_cols=70 Identities=19% Similarity=0.121 Sum_probs=51.3
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
....|+|.|+| .|-||+.+++.|...|.+|++.+|...........+ +.-...+.++++.+|+|+.+...
T Consensus 189 ~L~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g-------~~~~~~l~ell~~aDvV~l~lPl 258 (385)
T PRK07574 189 DLEGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELG-------LTYHVSFDSLVSVCDVVTIHCPL 258 (385)
T ss_pred ecCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcC-------ceecCCHHHHhhcCCEEEEcCCC
Confidence 45779999999 799999999999999999999998753211111111 11123467788999999888864
|
|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0066 Score=55.37 Aligned_cols=68 Identities=12% Similarity=0.111 Sum_probs=54.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
|++|.|+| +|++|+.++.....-|++|++++-.++.....-. -..+..+.+|.+.++++.++||+|=.
T Consensus 1 ~~tvgIlG-GGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va--~~~i~~~~dD~~al~ela~~~DViT~ 68 (375)
T COG0026 1 MKTVGILG-GGQLGRMMALAAARLGIKVIVLDPDADAPAAQVA--DRVIVAAYDDPEALRELAAKCDVITY 68 (375)
T ss_pred CCeEEEEc-CcHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc--cceeecCCCCHHHHHHHHhhCCEEEE
Confidence 57899999 7999999999999999999999977654332221 15667778899999999999998854
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0058 Score=59.72 Aligned_cols=73 Identities=15% Similarity=0.112 Sum_probs=49.1
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc---------c---ccee-EEecccchhhHhhhccCCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM---------F---CHEF-HLVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---------~---~i~~-~~~dl~~~~~~~~~~~~~d 92 (374)
.|+|.|+| +|.+|+.++..|+.+|++|++.++++........ . .... ..+.+.-.+++.++++++|
T Consensus 4 i~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD 82 (495)
T PRK07531 4 IMKAACIG-GGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGAD 82 (495)
T ss_pred cCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCC
Confidence 46899997 8999999999999999999999998654321100 0 0000 0011222334566788999
Q ss_pred EEEEccc
Q 017290 93 HVFNLAA 99 (374)
Q Consensus 93 ~vi~~a~ 99 (374)
+||-+..
T Consensus 83 ~Vieavp 89 (495)
T PRK07531 83 WIQESVP 89 (495)
T ss_pred EEEEcCc
Confidence 9998875
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.02 Score=53.63 Aligned_cols=102 Identities=19% Similarity=0.199 Sum_probs=68.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc---------------------------ccccceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE---------------------------DMFCHEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---------------------------~~~~i~~~~~ 76 (374)
+..+|+|+| .|-+|+++++.|...|. ++++++...-..... ....++.+..
T Consensus 40 ~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~ 118 (370)
T PRK05600 40 HNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRE 118 (370)
T ss_pred cCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeee
Confidence 467899999 78999999999999995 888888653110000 0113344444
Q ss_pred cccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccC
Q 017290 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147 (374)
Q Consensus 77 dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~ 147 (374)
.++ .+.+.++++++|+||.|.. |...-..+-++|.+.++ .+|+.+....+|
T Consensus 119 ~i~-~~~~~~~~~~~DlVid~~D------------------n~~~r~~in~~~~~~~i-P~v~~~~~g~~G 169 (370)
T PRK05600 119 RLT-AENAVELLNGVDLVLDGSD------------------SFATKFLVADAAEITGT-PLVWGTVLRFHG 169 (370)
T ss_pred ecC-HHHHHHHHhCCCEEEECCC------------------CHHHHHHHHHHHHHcCC-CEEEEEEecCEE
Confidence 443 3456677889999999986 44444455678899887 477776654444
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0037 Score=52.23 Aligned_cols=75 Identities=23% Similarity=0.147 Sum_probs=51.6
Q ss_pred cCCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEc
Q 017290 18 REPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNL 97 (374)
Q Consensus 18 ~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~ 97 (374)
........+++|.|+| .|-||+.+++.|..-|.+|++++|............ + ....+.++++++|+|+.+
T Consensus 28 ~~~~~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~--~------~~~~l~ell~~aDiv~~~ 98 (178)
T PF02826_consen 28 RFPGRELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFG--V------EYVSLDELLAQADIVSLH 98 (178)
T ss_dssp TTTBS-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTT--E------EESSHHHHHHH-SEEEE-
T ss_pred CCCccccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhccccc--c------eeeehhhhcchhhhhhhh
Confidence 3444556789999998 899999999999999999999999976433111111 1 223466778889999988
Q ss_pred cccc
Q 017290 98 AADM 101 (374)
Q Consensus 98 a~~~ 101 (374)
....
T Consensus 99 ~plt 102 (178)
T PF02826_consen 99 LPLT 102 (178)
T ss_dssp SSSS
T ss_pred hccc
Confidence 8743
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.024 Score=51.79 Aligned_cols=68 Identities=15% Similarity=0.183 Sum_probs=51.9
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
....++|.|+| .|.||+.+++.|...|++|+++++..+... ++... ...+++.++++++|+|+.+...
T Consensus 133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~-----~~~~~----~~~~~l~e~l~~aDvvv~~lPl 200 (312)
T PRK15469 133 HREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP-----GVQSF----AGREELSAFLSQTRVLINLLPN 200 (312)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC-----Cceee----cccccHHHHHhcCCEEEECCCC
Confidence 34678999998 999999999999999999999998654321 11111 1245688889999999998874
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0079 Score=53.70 Aligned_cols=100 Identities=10% Similarity=0.118 Sum_probs=70.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc-ccccccccceeEEecccchhhHhhhccCCCEEEEcccccCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE-HMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGG 103 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~ 103 (374)
.+++|.|+|+.| +|+--++....-|++|++++++.++ .......+.+.+..-..|++.+..+.+.-|.++|++..+..
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~ 259 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAE 259 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeeccc
Confidence 678999999999 9999888887789999999998743 22233456677666666888777777766777776652210
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecc
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~ 143 (374)
. . ...++++++..| ++|+++-.
T Consensus 260 ~-------------~---~~~~~~~lk~~G--t~V~vg~p 281 (360)
T KOG0023|consen 260 H-------------A---LEPLLGLLKVNG--TLVLVGLP 281 (360)
T ss_pred c-------------c---hHHHHHHhhcCC--EEEEEeCc
Confidence 0 1 234566777777 68877653
|
|
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.017 Score=53.39 Aligned_cols=93 Identities=14% Similarity=0.115 Sum_probs=54.8
Q ss_pred CeEEEEcCcchhHHHHHHHHH-hCCCE---EEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccC
Q 017290 27 LRISVTGAGGFIASHIARRLK-SEGHY---IIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~-~~g~~---V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
|+|.|+||||.+|+.+++.|. ++.+. ++.+....+........+.....-++.+. ..+.++|++|.+++.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~~~~~v~~~~~~----~~~~~vDivffa~g~-- 74 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDI----DALKALDIIITCQGG-- 74 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCCCcceEEcCccc----ccccCCCEEEEcCCH--
Confidence 579999999999999999999 55654 44444332211111111112222233222 235689999999973
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
..+..+...+.++|.. .+|=.||
T Consensus 75 -----------------~~s~~~~p~~~~aG~~~~VIDnSS 98 (366)
T TIGR01745 75 -----------------DYTNEIYPKLRESGWQGYWIDAAS 98 (366)
T ss_pred -----------------HHHHHHHHHHHhCCCCeEEEECCh
Confidence 1246677778888842 3444444
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.014 Score=53.80 Aligned_cols=73 Identities=23% Similarity=0.280 Sum_probs=48.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccc-hhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRV-MDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~-~~~~~~~~~~~d~vi~~a~ 99 (374)
...++||+|++|.+|..+++.+...|.+|+++++++.+.......+...+ .+..+ .+.+... .++|+||++++
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~d~v~~~~g 235 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYV-IDGSKFSEDVKKL-GGADVVIELVG 235 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEE-EecHHHHHHHHhc-cCCCEEEECCC
Confidence 45789999999999999999999999999999877643222211122111 12211 1222222 27899999987
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.02 Score=51.92 Aligned_cols=96 Identities=17% Similarity=0.104 Sum_probs=55.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCC--E-EEEEeCCCCcccc---cccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGH--Y-IIASDWKKNEHMT---EDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~--~-V~~~~r~~~~~~~---~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
+++|.|+|+||.+|+.+++.|.++.+ + +.++....+.... .....+.+ .-+..+. ..++++|++|.+++
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~~v-~~~~~~~----~~~~~~Divf~~ag 75 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSIGV-PEDAADE----FVFSDVDIVFFAAG 75 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccccC-ccccccc----cccccCCEEEEeCc
Confidence 47899999999999999999998753 2 3344333322221 11110111 1111111 12348999999997
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCC
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPE 148 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~ 148 (374)
.. .++.+...+.++|+ +.++.++.|-.
T Consensus 76 ~~-------------------~s~~~~p~~~~~G~---~VIdnsSa~Rm 102 (334)
T COG0136 76 GS-------------------VSKEVEPKAAEAGC---VVIDNSSAFRM 102 (334)
T ss_pred hH-------------------HHHHHHHHHHHcCC---EEEeCCccccc
Confidence 32 13566777888884 44555555543
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.018 Score=58.33 Aligned_cols=96 Identities=25% Similarity=0.277 Sum_probs=66.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCccccc--------------------------ccccceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTE--------------------------DMFCHEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~--------------------------~~~~i~~~~~ 76 (374)
...+|+|+|. | +|++++..|...|- ++++++...-..... ....++.+..
T Consensus 106 ~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~ 183 (722)
T PRK07877 106 GRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTD 183 (722)
T ss_pred hcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEec
Confidence 4678999998 8 99999999999984 788877543111000 0114455555
Q ss_pred cccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 77 dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
.++ .+.+.++++++|+||.|.- |+..=..+-++|.+.++ -+|+-++
T Consensus 184 ~i~-~~n~~~~l~~~DlVvD~~D------------------~~~~R~~ln~~a~~~~i-P~i~~~~ 229 (722)
T PRK07877 184 GLT-EDNVDAFLDGLDVVVEECD------------------SLDVKVLLREAARARRI-PVLMATS 229 (722)
T ss_pred cCC-HHHHHHHhcCCCEEEECCC------------------CHHHHHHHHHHHHHcCC-CEEEEcC
Confidence 554 5678888899999999985 44333445578899987 4666654
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0076 Score=54.15 Aligned_cols=57 Identities=11% Similarity=0.093 Sum_probs=48.6
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
+..+++|.|+|.+|.+|+.++..|+++|++|++..+.+. .+.+..+++|+||-+.+.
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~---------------------~l~e~~~~ADIVIsavg~ 212 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST---------------------DAKALCRQADIVVAAVGR 212 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC---------------------CHHHHHhcCCEEEEecCC
Confidence 567899999999999999999999999999999976642 245566789999999884
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.003 Score=58.31 Aligned_cols=73 Identities=15% Similarity=0.153 Sum_probs=47.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeE-------EecccchhhHhhhccCCCEEEEcc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFH-------LVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~-------~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
||+|.|.| .|.+|..++..|++.|++|++++|++.........+.... ...+....+..+.++++|+||-+.
T Consensus 1 mmkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v 79 (325)
T PRK00094 1 MMKIAVLG-AGSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAV 79 (325)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeC
Confidence 57899999 6999999999999999999999997643221111100000 001111223445667899999887
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
.
T Consensus 80 ~ 80 (325)
T PRK00094 80 P 80 (325)
T ss_pred C
Confidence 5
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.021 Score=42.99 Aligned_cols=91 Identities=16% Similarity=0.157 Sum_probs=58.1
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
+..++++|||+|| |-+|..=++.|++.|.+|++++... ......+++..-++ ...+++++.||-+.+
T Consensus 3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~----~~~~~~i~~~~~~~------~~~l~~~~lV~~at~-- 69 (103)
T PF13241_consen 3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI----EFSEGLIQLIRREF------EEDLDGADLVFAATD-- 69 (103)
T ss_dssp E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE----HHHHTSCEEEESS-------GGGCTTESEEEE-SS--
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch----hhhhhHHHHHhhhH------HHHHhhheEEEecCC--
Confidence 4557899999995 9999999999999999999999774 11112234333332 234677887775543
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecc
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~ 143 (374)
+-.....+.+.|++.++ .++.+..
T Consensus 70 ----------------d~~~n~~i~~~a~~~~i--~vn~~D~ 93 (103)
T PF13241_consen 70 ----------------DPELNEAIYADARARGI--LVNVVDD 93 (103)
T ss_dssp -----------------HHHHHHHHHHHHHTTS--EEEETT-
T ss_pred ----------------CHHHHHHHHHHHhhCCE--EEEECCC
Confidence 22334567778888874 6666554
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.014 Score=56.52 Aligned_cols=72 Identities=11% Similarity=-0.070 Sum_probs=48.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc----cccccceeEEecccchhhHhhhcc-CCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT----EDMFCHEFHLVDLRVMDNCLKVTK-GVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~i~~~~~dl~~~~~~~~~~~-~~d~vi~~a 98 (374)
..+++|+|+|++| +|.++++.|++.|++|.+.++....... ....++.+..+.. ... .+. ++|.||...
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~--~~~---~~~~~~d~vV~s~ 76 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSH--PLE---LLDEDFDLMVKNP 76 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCC--CHH---HhcCcCCEEEECC
Confidence 3568999999987 9999999999999999999876532111 1122444443321 111 233 489999999
Q ss_pred ccc
Q 017290 99 ADM 101 (374)
Q Consensus 99 ~~~ 101 (374)
+..
T Consensus 77 gi~ 79 (447)
T PRK02472 77 GIP 79 (447)
T ss_pred CCC
Confidence 864
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0055 Score=55.62 Aligned_cols=70 Identities=17% Similarity=0.129 Sum_probs=51.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
...++|+|+| .|.+|+.++..|...|.+|++++|++.........+.+++ ..+.+.+.++++|+||++++
T Consensus 150 l~g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-----~~~~l~~~l~~aDiVI~t~p 219 (296)
T PRK08306 150 IHGSNVLVLG-FGRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-----HLSELAEEVGKIDIIFNTIP 219 (296)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-----cHHHHHHHhCCCCEEEECCC
Confidence 3578999999 5889999999999999999999998654222222222222 22456677789999999864
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.026 Score=53.25 Aligned_cols=102 Identities=19% Similarity=0.077 Sum_probs=66.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc-------------------------ccc--cceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE-------------------------DMF--CHEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-------------------------~~~--~i~~~~~ 76 (374)
...+|+|.| .|-+|+++++.|...|. +++++++..-..... ..+ .++.+..
T Consensus 134 ~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~ 212 (376)
T PRK08762 134 LEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQE 212 (376)
T ss_pred hcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence 567899997 68899999999999996 788888762110000 001 1222322
Q ss_pred cccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccC
Q 017290 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147 (374)
Q Consensus 77 dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~ 147 (374)
.++ .+.+.++++++|+||++.. |...-..+-++|.+.++ .+|+.+....+|
T Consensus 213 ~~~-~~~~~~~~~~~D~Vv~~~d------------------~~~~r~~ln~~~~~~~i-p~i~~~~~g~~g 263 (376)
T PRK08762 213 RVT-SDNVEALLQDVDVVVDGAD------------------NFPTRYLLNDACVKLGK-PLVYGAVFRFEG 263 (376)
T ss_pred cCC-hHHHHHHHhCCCEEEECCC------------------CHHHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence 332 3455667788999999976 23323446678999997 688877655444
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.039 Score=46.99 Aligned_cols=72 Identities=21% Similarity=0.170 Sum_probs=48.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCC---CCccccc-----------------------ccccceeEEec
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWK---KNEHMTE-----------------------DMFCHEFHLVD 77 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~~-----------------------~~~~i~~~~~d 77 (374)
+..+|+|.| .|-+|+.++..|...|. +|++++.. .+..... ....++.+..+
T Consensus 20 ~~~~V~IvG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~ 98 (200)
T TIGR02354 20 EQATVAICG-LGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEK 98 (200)
T ss_pred hCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeee
Confidence 567899999 58899999999999998 79999877 3221110 00123333344
Q ss_pred ccchhhHhhhccCCCEEEEcc
Q 017290 78 LRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 78 l~~~~~~~~~~~~~d~vi~~a 98 (374)
++ .+.+.++++++|+||.+.
T Consensus 99 i~-~~~~~~~~~~~DlVi~a~ 118 (200)
T TIGR02354 99 IT-EENIDKFFKDADIVCEAF 118 (200)
T ss_pred CC-HhHHHHHhcCCCEEEECC
Confidence 43 355666778899999884
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PLN02353 probable UDP-glucose 6-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.011 Score=57.10 Aligned_cols=74 Identities=12% Similarity=0.057 Sum_probs=48.9
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhC--CCEEEEEeCCCCcccccccccceeEE-----------e-cccchhhHhhhccCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSE--GHYIIASDWKKNEHMTEDMFCHEFHL-----------V-DLRVMDNCLKVTKGV 91 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~i~~~~-----------~-dl~~~~~~~~~~~~~ 91 (374)
||+|.|.| .|++|..++-.|.+. |++|++++.++.+..........+.. + .+.-..++.++++.+
T Consensus 1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~a 79 (473)
T PLN02353 1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEA 79 (473)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcC
Confidence 58999997 899999999999988 58899999887643322111111110 1 122223345567789
Q ss_pred CEEEEcccc
Q 017290 92 DHVFNLAAD 100 (374)
Q Consensus 92 d~vi~~a~~ 100 (374)
|++|-|.+.
T Consensus 80 dvi~I~V~T 88 (473)
T PLN02353 80 DIVFVSVNT 88 (473)
T ss_pred CEEEEEeCC
Confidence 999999874
|
|
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.013 Score=53.37 Aligned_cols=68 Identities=15% Similarity=0.191 Sum_probs=49.1
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|+|.|+| .|.+|..+++.|+++||+|++.+|++.+.......+... ..+.+++.+.++.+|+||.+..
T Consensus 1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~----~~s~~~~~~~~~~~dvIi~~vp 68 (298)
T TIGR00872 1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTG----VANLRELSQRLSAPRVVWVMVP 68 (298)
T ss_pred CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcc----cCCHHHHHhhcCCCCEEEEEcC
Confidence 5799998 799999999999999999999999876533322222111 1234455555678899998875
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0091 Score=54.75 Aligned_cols=74 Identities=15% Similarity=0.166 Sum_probs=48.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc-----ccc------e-eEEecccchhhHhhhccCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM-----FCH------E-FHLVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~i------~-~~~~dl~~~~~~~~~~~~~d 92 (374)
..++|.|+| .|.+|..++..|++.|++|++++++++....... .+. . .....+.-..+..++++++|
T Consensus 3 ~~~~I~vIG-aG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aD 81 (311)
T PRK06130 3 PIQNLAIIG-AGTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGAD 81 (311)
T ss_pred CccEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCC
Confidence 457899998 6999999999999999999999987654221110 000 0 00001111223445677899
Q ss_pred EEEEccc
Q 017290 93 HVFNLAA 99 (374)
Q Consensus 93 ~vi~~a~ 99 (374)
+||-+..
T Consensus 82 lVi~av~ 88 (311)
T PRK06130 82 LVIEAVP 88 (311)
T ss_pred EEEEecc
Confidence 9999875
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0049 Score=55.86 Aligned_cols=72 Identities=17% Similarity=0.161 Sum_probs=48.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc-------ccce---eE-------EecccchhhHhhhcc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM-------FCHE---FH-------LVDLRVMDNCLKVTK 89 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~i~---~~-------~~dl~~~~~~~~~~~ 89 (374)
++|.|+| .|.+|..++..|+++||+|++++++++....... .+++ +. ...+.-...+.++++
T Consensus 2 ~~V~VIG-~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (288)
T PRK09260 2 EKLVVVG-AGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA 80 (288)
T ss_pred cEEEEEC-ccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence 6899999 5999999999999999999999998764322110 0000 00 001111234556778
Q ss_pred CCCEEEEccc
Q 017290 90 GVDHVFNLAA 99 (374)
Q Consensus 90 ~~d~vi~~a~ 99 (374)
++|+||-|..
T Consensus 81 ~aD~Vi~avp 90 (288)
T PRK09260 81 DADLVIEAVP 90 (288)
T ss_pred CCCEEEEecc
Confidence 9999999975
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.008 Score=56.99 Aligned_cols=76 Identities=20% Similarity=0.191 Sum_probs=50.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEe--cccch----hhHhhhcc--CCCEEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLV--DLRVM----DNCLKVTK--GVDHVF 95 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~--dl~~~----~~~~~~~~--~~d~vi 95 (374)
+.+|+|||||+...+|..+++.|.+.|++|++++..+.........--.++.. .-.+. +.+.++++ ++|+||
T Consensus 2 ~~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~vI 81 (389)
T PRK06849 2 NTKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLLI 81 (389)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 46799999999999999999999999999999998764322111100122222 11122 33444443 689999
Q ss_pred Eccc
Q 017290 96 NLAA 99 (374)
Q Consensus 96 ~~a~ 99 (374)
-+..
T Consensus 82 P~~e 85 (389)
T PRK06849 82 PTCE 85 (389)
T ss_pred ECCh
Confidence 8765
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.0059 Score=52.05 Aligned_cols=70 Identities=17% Similarity=0.135 Sum_probs=47.5
Q ss_pred CCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccc-cceeEEecccchhhHhhhcc-CCCEEEEcc
Q 017290 21 YWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMF-CHEFHLVDLRVMDNCLKVTK-GVDHVFNLA 98 (374)
Q Consensus 21 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~i~~~~~dl~~~~~~~~~~~-~~d~vi~~a 98 (374)
.....+|+|+|+|. |.+|+++++.|.+.|++|++.++++......... +.+.+ + . .+++. .+|+++.||
T Consensus 23 ~~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v--~---~---~~l~~~~~Dv~vp~A 93 (200)
T cd01075 23 TDSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVV--A---P---EEIYSVDADVFAPCA 93 (200)
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE--c---c---hhhccccCCEEEecc
Confidence 34557799999995 7999999999999999999998876432221111 11211 1 1 22332 799999887
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
.
T Consensus 94 ~ 94 (200)
T cd01075 94 L 94 (200)
T ss_pred c
Confidence 5
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.012 Score=56.00 Aligned_cols=72 Identities=21% Similarity=0.216 Sum_probs=54.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~ 99 (374)
..|+|+|+| +|.+|..++..+.+.|++|++++.++........ -.++..|..|.+.+.++++ ++|.|+....
T Consensus 11 ~~~~ilIiG-~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~~id~vi~~~e 84 (395)
T PRK09288 11 SATRVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA--HRSHVIDMLDGDALRAVIEREKPDYIVPEIE 84 (395)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh--hheEECCCCCHHHHHHHHHHhCCCEEEEeeC
Confidence 568999998 5799999999999999999999987654222111 1345677788888888877 8998886543
|
|
| >TIGR00036 dapB dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.028 Score=50.24 Aligned_cols=33 Identities=18% Similarity=0.359 Sum_probs=27.8
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSE-GHYIIASDW 58 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r 58 (374)
|++|.|+|++|.+|+.+++.+.+. +.++.++..
T Consensus 1 ~ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d 34 (266)
T TIGR00036 1 TIKVAVAGAAGRMGRELIKAALAAEGLQLVAAFE 34 (266)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 479999999999999999999874 788776543
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0047 Score=56.19 Aligned_cols=66 Identities=12% Similarity=0.208 Sum_probs=47.9
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
+|+|.|.| .|.+|+.+++.|.+.|++|.+.+|++.........++. ..+...++++++|+||-+..
T Consensus 2 ~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~-------~~~~~~e~~~~~d~vi~~vp 67 (296)
T PRK11559 2 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAE-------TASTAKAVAEQCDVIITMLP 67 (296)
T ss_pred CceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCe-------ecCCHHHHHhcCCEEEEeCC
Confidence 47899998 79999999999999999999999886543222211211 11234456678999999875
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.012 Score=53.01 Aligned_cols=66 Identities=18% Similarity=0.205 Sum_probs=45.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|+|.|+| .|.+|..++..|.+.|++|+++++++.........+.. +... ... +.++++|+||-|..
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~----~~~~-~~~-~~~~~aDlVilavp 66 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLV----DEAS-TDL-SLLKDCDLVILALP 66 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCc----cccc-CCH-hHhcCCCEEEEcCC
Confidence 5799998 89999999999999999999999876542222111110 0010 111 24678999999976
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.012 Score=54.34 Aligned_cols=74 Identities=14% Similarity=0.212 Sum_probs=48.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccc---hhh-Hhhhc-cCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRV---MDN-CLKVT-KGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~---~~~-~~~~~-~~~d~vi~~a~ 99 (374)
.+.+|||+|++|-+|..+++.+...|.+|+++++++++.......+...+ .|..+ ... +.... +++|+||++.+
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~gvdvv~d~~G 216 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVA-FNYKTVKSLEETLKKASPDGYDCYFDNVG 216 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeccccccHHHHHHHhCCCCeEEEEECCC
Confidence 46799999999999999999888889999998887654333222333221 12222 111 22222 36899999886
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.015 Score=52.12 Aligned_cols=66 Identities=23% Similarity=0.177 Sum_probs=45.8
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCC---CEEEEEeCCCCcccccccc-cceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEG---HYIIASDWKKNEHMTEDMF-CHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~-~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
||+|.|+| .|.+|..++..|.+.| ++|++++|++......... ++.+ . ....++++.+|+||-+..
T Consensus 2 mm~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~-----~--~~~~~~~~~advVil~v~ 71 (267)
T PRK11880 2 MKKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRA-----A--TDNQEAAQEADVVVLAVK 71 (267)
T ss_pred CCEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCee-----c--CChHHHHhcCCEEEEEcC
Confidence 68899999 6999999999999998 7899999986543221111 2211 1 123344568999998764
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.055 Score=49.34 Aligned_cols=156 Identities=13% Similarity=0.093 Sum_probs=92.5
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccc----ccc-------ccceeEEecccchhhHhhhccCCCEE
Q 017290 28 RISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMT----EDM-------FCHEFHLVDLRVMDNCLKVTKGVDHV 94 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~-------~~i~~~~~dl~~~~~~~~~~~~~d~v 94 (374)
||.|+|+ |.+|+.++-.|+..+. ++..++.+...... ... ..+.+..+| .+.++++|+|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv 72 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII 72 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence 6889997 9999999999998874 79999987543211 000 012222222 2457899999
Q ss_pred EEcccccCCcccccCC--cceehhhhHHHHHHHHHHHHhCCCCeEEEeec-c---cccCCCcccccccCCCCCCCCCCCC
Q 017290 95 FNLAADMGGMGFIQSN--HSVIMYNNTMISFNMLEASRISGVKRFFYASS-A---CIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~--~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss-~---~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
|-.||..... ... ..+.+..|....+.+...+.+++.+-++.+-| . ..|- ..+.+ ...+
T Consensus 73 vitaG~~~kp---g~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNPvDv~t~~----------~~k~s--g~p~ 137 (307)
T cd05290 73 VITAGPSIDP---GNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLDIAVYI----------AATEF--DYPA 137 (307)
T ss_pred EECCCCCCCC---CCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCcHHHHHHH----------HHHHh--CcCh
Confidence 9999964321 112 36678889999999999999988654444433 1 0010 00000 1112
Q ss_pred CCchHH-hHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCC
Q 017290 169 QDAYGL-EKLASEELCKHYTKDFGIECRVGRFHNIYGPFG 207 (374)
Q Consensus 169 ~~~y~~-sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~ 207 (374)
.-..|. +-+..-++-...++..+++...++.. |+|.++
T Consensus 138 ~rviG~gt~LDs~R~~~~la~~l~v~~~~V~~~-ViGeHG 176 (307)
T cd05290 138 NKVIGTGTMLDTARLRRIVADKYGVDPKNVTGY-VLGEHG 176 (307)
T ss_pred hheecccchHHHHHHHHHHHHHhCCCcccEEEE-EEecCC
Confidence 222222 33333444444555567777777654 888774
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0091 Score=56.01 Aligned_cols=75 Identities=12% Similarity=0.047 Sum_probs=53.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
...+|+|+|+ |-+|..+++.|...|.+|++++|++.+...........+..+..+.+.+.+.++++|+||.++..
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~ 240 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLI 240 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEcccc
Confidence 4577999985 99999999999999999999998765422111110112233445667788888899999998753
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.014 Score=53.02 Aligned_cols=36 Identities=22% Similarity=0.263 Sum_probs=32.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
.++|.|+| +|.+|..++..|+..|++|+++++++..
T Consensus 3 i~~I~ViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~ 38 (291)
T PRK06035 3 IKVIGVVG-SGVMGQGIAQVFARTGYDVTIVDVSEEI 38 (291)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence 47899998 6999999999999999999999998754
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.014 Score=52.24 Aligned_cols=57 Identities=11% Similarity=0.126 Sum_probs=48.8
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
...+++|+|+|.++.+|+.++..|+..|..|+++.++. ..+.+.++++|+||.+.+.
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t---------------------~~l~~~~~~ADIVIsAvg~ 211 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS---------------------KDMASYLKDADVIVSAVGK 211 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHHHhhCCEEEECCCC
Confidence 46789999999999999999999999999999988652 2356677899999999985
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.014 Score=52.35 Aligned_cols=57 Identities=12% Similarity=0.120 Sum_probs=47.2
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
.+..+++|+|+|.+|.+|+.++..|++.|..|+++.|+. ..+.+.++++|+||++.+
T Consensus 155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t---------------------~~L~~~~~~aDIvI~AtG 211 (283)
T PRK14192 155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT---------------------QNLPELVKQADIIVGAVG 211 (283)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc---------------------hhHHHHhccCCEEEEccC
Confidence 355789999999999999999999999999999887631 224455679999999996
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.018 Score=53.42 Aligned_cols=96 Identities=14% Similarity=0.145 Sum_probs=60.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc-ccceeEEeccc---c-hhhHhhhc-cCCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM-FCHEFHLVDLR---V-MDNCLKVT-KGVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~i~~~~~dl~---~-~~~~~~~~-~~~d~vi~~a 98 (374)
.+.+|||+||+|.+|..+++.+...|.+|+++++++.+...... .+...+ .|.. + .+.+.... .++|+||++.
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~~gvd~v~d~~ 229 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDA-FNYKEEPDLDAALKRYFPNGIDIYFDNV 229 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCcee-EEcCCcccHHHHHHHhCCCCcEEEEECC
Confidence 46899999999999999999888889999998887654332222 233221 1211 1 11222222 3789999988
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
+. ......++.++..| +++.++.
T Consensus 230 g~-------------------~~~~~~~~~l~~~G--~iv~~G~ 252 (338)
T cd08295 230 GG-------------------KMLDAVLLNMNLHG--RIAACGM 252 (338)
T ss_pred CH-------------------HHHHHHHHHhccCc--EEEEecc
Confidence 62 11234455555555 6777764
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK10537 voltage-gated potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.042 Score=51.83 Aligned_cols=71 Identities=11% Similarity=-0.085 Sum_probs=55.4
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhc-cCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT-KGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~-~~~d~vi~~a~ 99 (374)
..+++|+| .|-+|+.++++|.++|++|.+++.+.. ......+..++.+|.++.+.++++- ++++.||-+..
T Consensus 240 k~HvII~G-~g~lg~~v~~~L~~~g~~vvVId~d~~--~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t~ 311 (393)
T PRK10537 240 KDHFIICG-HSPLAINTYLGLRQRGQAVTVIVPLGL--EHRLPDDADLIPGDSSDSAVLKKAGAARARAILALRD 311 (393)
T ss_pred CCeEEEEC-CChHHHHHHHHHHHCCCCEEEEECchh--hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEcCC
Confidence 45699998 789999999999999999988885522 2223345789999999999887764 68898887654
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.04 Score=52.08 Aligned_cols=103 Identities=16% Similarity=0.094 Sum_probs=66.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc---------------------------ccccceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE---------------------------DMFCHEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---------------------------~~~~i~~~~~ 76 (374)
...+|+|+| .|-+|.++++.|...|. ++++++...-..... ....++.+..
T Consensus 37 ~~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~ 115 (390)
T PRK07411 37 KAASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYET 115 (390)
T ss_pred hcCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEec
Confidence 457899999 78999999999999995 677776543111000 0113444444
Q ss_pred cccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCC
Q 017290 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPE 148 (374)
Q Consensus 77 dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~ 148 (374)
.++. +...+++.++|+||.|.. |...-..+-++|.+.++ .+|+.+....||.
T Consensus 116 ~~~~-~~~~~~~~~~D~Vvd~~d------------------~~~~r~~ln~~~~~~~~-p~v~~~~~g~~g~ 167 (390)
T PRK07411 116 RLSS-ENALDILAPYDVVVDGTD------------------NFPTRYLVNDACVLLNK-PNVYGSIFRFEGQ 167 (390)
T ss_pred ccCH-HhHHHHHhCCCEEEECCC------------------CHHHHHHHHHHHHHcCC-CEEEEEEccCEEE
Confidence 4443 345567789999999986 33333445578888886 5777666555543
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.0052 Score=55.33 Aligned_cols=74 Identities=16% Similarity=0.079 Sum_probs=49.4
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcccccccccce-eEEecccchhhHhhhccCCCEEEEcccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDMFCHE-FHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~i~-~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
...+++++|+|+ |.+|+.++..|.+.| .+|++++|+..+....... +. ....++ + ......+.++|+||++...
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~-~~~~~~~~~-~-~~~~~~~~~~DivInaTp~ 195 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKL-FGALGKAEL-D-LELQEELADFDLIINATSA 195 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH-hhhccceee-c-ccchhccccCCEEEECCcC
Confidence 446689999995 999999999999999 7999999987543222110 00 000111 0 0223456789999999874
|
|
| >PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.01 Score=53.65 Aligned_cols=38 Identities=21% Similarity=0.262 Sum_probs=33.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH 63 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 63 (374)
++++|.|+| .|.+|..++..|+..|++|+++++++...
T Consensus 2 ~~~kI~VIG-~G~mG~~ia~~la~~g~~V~~~d~~~~~~ 39 (282)
T PRK05808 2 GIQKIGVIG-AGTMGNGIAQVCAVAGYDVVMVDISDAAV 39 (282)
T ss_pred CccEEEEEc-cCHHHHHHHHHHHHCCCceEEEeCCHHHH
Confidence 457899998 69999999999999999999999887543
|
|
| >PRK06444 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.01 Score=50.29 Aligned_cols=28 Identities=14% Similarity=0.239 Sum_probs=26.5
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYII 54 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~ 54 (374)
|+|.|+||+|.+|+.+++.|.+.||.|+
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLGVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence 6899999999999999999999999986
|
|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.031 Score=50.70 Aligned_cols=68 Identities=13% Similarity=0.062 Sum_probs=49.6
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
....++|.|+| .|.+|+.+++.|...|++|++.+|...........++++ ..+.++++.+|+|+.+..
T Consensus 13 ~LkgKtVGIIG-~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v--------~sl~Eaak~ADVV~llLP 80 (335)
T PRK13403 13 LLQGKTVAVIG-YGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEV--------MSVSEAVRTAQVVQMLLP 80 (335)
T ss_pred hhCcCEEEEEe-EcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEE--------CCHHHHHhcCCEEEEeCC
Confidence 34679999999 899999999999999999999887532211111112221 146678889999999876
|
|
| >PRK06901 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.044 Score=49.61 Aligned_cols=93 Identities=14% Similarity=0.086 Sum_probs=55.6
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCE---EEEEeCC-CCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHY---IIASDWK-KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~---V~~~~r~-~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
.++|.| ||||-+|+.+.+.|.++++. ++.+... .+........+-++..-++++ ..++++|++|. ++..
T Consensus 3 ~~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~~~s~gk~i~f~g~~~~V~~l~~-----~~f~~vDia~f-ag~~ 75 (322)
T PRK06901 3 TLNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIEPFGEEQGIRFNNKAVEQIAPEE-----VEWADFNYVFF-AGKM 75 (322)
T ss_pred cceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccccccCCCEEEECCEEEEEEECCc-----cCcccCCEEEE-cCHH
Confidence 468999 99999999999999988875 4444433 111111111111222223332 23578999999 7621
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccc
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~v 145 (374)
..+.....+.+.|+ .+|=.||..=
T Consensus 76 -------------------~s~~~ap~a~~aG~-~VIDnSsa~R 99 (322)
T PRK06901 76 -------------------AQAEHLAQAAEAGC-IVIDLYGICA 99 (322)
T ss_pred -------------------HHHHHHHHHHHCCC-EEEECChHhh
Confidence 23455666778886 5666666543
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.0068 Score=55.14 Aligned_cols=66 Identities=17% Similarity=0.128 Sum_probs=48.2
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|++|.|+| .|.+|..+++.|++.||+|++++|++.+.......++. ......++++++|+||-|..
T Consensus 1 m~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~-------~~~s~~~~~~~aDvVi~~vp 66 (296)
T PRK15461 1 MAAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGAT-------PAASPAQAAAGAEFVITMLP 66 (296)
T ss_pred CCeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCc-------ccCCHHHHHhcCCEEEEecC
Confidence 36899998 89999999999999999999999987654332222211 12234456678899998875
|
|
| >PRK06249 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.0089 Score=54.88 Aligned_cols=38 Identities=24% Similarity=0.214 Sum_probs=34.3
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK 60 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 60 (374)
|+++.|+|+|.| .|-||..++..|.+.|++|+++.|+.
T Consensus 1 ~~~~~m~I~IiG-~GaiG~~lA~~L~~~g~~V~~~~r~~ 38 (313)
T PRK06249 1 MDSETPRIGIIG-TGAIGGFYGAMLARAGFDVHFLLRSD 38 (313)
T ss_pred CCCcCcEEEEEC-CCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 456678999997 89999999999999999999999976
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.036 Score=43.02 Aligned_cols=70 Identities=16% Similarity=0.207 Sum_probs=41.8
Q ss_pred eEEEEcCcchhHHHHHHHHHhC-CCEEEEE-eCCCCcccccc--cccce-eEEecccchhhHhhhccCCCEEEEcccc
Q 017290 28 RISVTGAGGFIASHIARRLKSE-GHYIIAS-DWKKNEHMTED--MFCHE-FHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~--~~~i~-~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
||.|+|++|.+|..+++.|.+. ++++.++ ++..+...... ...+. +...++ +.+.+. ..++|+||.|.+.
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~DvV~~~~~~ 75 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLEL-EPEDFE--ELAVDIVFLALPH 75 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCccccccccccc-ccCChh--hcCCCEEEEcCCc
Confidence 5889999999999999999995 7888877 44322211111 11111 111122 212222 2478999988863
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >PRK08229 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.0062 Score=56.62 Aligned_cols=35 Identities=26% Similarity=0.331 Sum_probs=31.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK 60 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 60 (374)
+||+|.|+| +|.+|..++..|.+.||+|++++|++
T Consensus 1 ~~mkI~IiG-~G~mG~~~A~~L~~~G~~V~~~~r~~ 35 (341)
T PRK08229 1 MMARICVLG-AGSIGCYLGGRLAAAGADVTLIGRAR 35 (341)
T ss_pred CCceEEEEC-CCHHHHHHHHHHHhcCCcEEEEecHH
Confidence 358899998 89999999999999999999999864
|
|
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.037 Score=49.50 Aligned_cols=93 Identities=16% Similarity=0.164 Sum_probs=61.6
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-c-------------ccceeEEecccchhhHhhhccC--
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-M-------------FCHEFHLVDLRVMDNCLKVTKG-- 90 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~-------------~~i~~~~~dl~~~~~~~~~~~~-- 90 (374)
++|.++| .|-.|..++..|+++||+|++.+|++.+..+.. . .+..++..-+.|.+.+++++.+
T Consensus 1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~ 79 (286)
T COG2084 1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGEN 79 (286)
T ss_pred CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCcc
Confidence 4788888 999999999999999999999999987622111 1 1334455555555555555432
Q ss_pred --------CCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEE
Q 017290 91 --------VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138 (374)
Q Consensus 91 --------~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i 138 (374)
=.++|++..+ ....++.+.+.+++.|. +++
T Consensus 80 g~~~~~~~G~i~IDmSTi-----------------sp~~a~~~a~~~~~~G~-~~l 117 (286)
T COG2084 80 GLLEGLKPGAIVIDMSTI-----------------SPETARELAAALAAKGL-EFL 117 (286)
T ss_pred chhhcCCCCCEEEECCCC-----------------CHHHHHHHHHHHHhcCC-cEE
Confidence 1344444432 33456788888888886 344
|
|
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.018 Score=52.32 Aligned_cols=37 Identities=19% Similarity=0.281 Sum_probs=33.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
+.++|.|+| .|.+|..++..|+.+|++|+++++++..
T Consensus 3 ~~~kI~vIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~ 39 (292)
T PRK07530 3 AIKKVGVIG-AGQMGNGIAHVCALAGYDVLLNDVSADR 39 (292)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 457899998 6999999999999999999999998653
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.023 Score=52.32 Aligned_cols=74 Identities=15% Similarity=0.221 Sum_probs=49.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccch---hhHhhhc-cCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVM---DNCLKVT-KGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~---~~~~~~~-~~~d~vi~~a~ 99 (374)
.+.+|||+||+|-+|..+++.+...|.+|+++++++.+.......++..+ .|..+. +.+.... +++|+||++.+
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld~~g 220 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAV-FNYKTVSLEEALKEAAPDGIDCYFDNVG 220 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCccHHHHHHHHCCCCcEEEEECCC
Confidence 56899999999999999999998899999998877654332222233221 222222 2222222 36899999886
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.014 Score=51.83 Aligned_cols=72 Identities=18% Similarity=0.178 Sum_probs=57.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~ 99 (374)
...||++.| +|-+|++++-+++.-|.+|++++|-.......-. -.-+..|+.|.+.+..+++ ++|+||--..
T Consensus 11 ~a~kvmLLG-SGELGKEvaIe~QRLG~eViAVDrY~~APAmqVA--hrs~Vi~MlD~~al~avv~rekPd~IVpEiE 84 (394)
T COG0027 11 QATKVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA--HRSYVIDMLDGDALRAVVEREKPDYIVPEIE 84 (394)
T ss_pred CCeEEEEec-CCccchHHHHHHHhcCCEEEEecCcCCChhhhhh--hheeeeeccCHHHHHHHHHhhCCCeeeehhh
Confidence 457799998 8999999999999999999999998764433211 1445689999999999886 8998886543
|
|
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.042 Score=49.30 Aligned_cols=99 Identities=16% Similarity=0.101 Sum_probs=65.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccc-------------------------cc--cceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTED-------------------------MF--CHEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-------------------------~~--~i~~~~~ 76 (374)
+..+|||.| .|-+|.++++.|...|. .|++++...-...... .+ .++++..
T Consensus 18 ~~s~VLIvG-~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~~ 96 (286)
T cd01491 18 QKSNVLISG-LGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVSTG 96 (286)
T ss_pred hcCcEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEec
Confidence 557899999 78899999999999995 6888875542211110 00 1222222
Q ss_pred cccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCC
Q 017290 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPE 148 (374)
Q Consensus 77 dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~ 148 (374)
++ ..+.+.++|+||.+.. +......+-++|++.++ .||...+.+.||.
T Consensus 97 ~~-----~~~~l~~fdvVV~~~~------------------~~~~~~~in~~c~~~~i-pfI~a~~~G~~G~ 144 (286)
T cd01491 97 PL-----TTDELLKFQVVVLTDA------------------SLEDQLKINEFCHSPGI-KFISADTRGLFGS 144 (286)
T ss_pred cC-----CHHHHhcCCEEEEecC------------------CHHHHHHHHHHHHHcCC-EEEEEeccccEEE
Confidence 21 1245567888887754 34444567788999887 7998888777765
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.041 Score=44.86 Aligned_cols=35 Identities=26% Similarity=0.416 Sum_probs=31.7
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEe
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASD 57 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~ 57 (374)
+...+++|+|+| .|-+|...++.|++.|++|++++
T Consensus 9 l~l~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIs 43 (157)
T PRK06719 9 FNLHNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVS 43 (157)
T ss_pred EEcCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEc
Confidence 456889999999 69999999999999999999995
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.023 Score=52.51 Aligned_cols=68 Identities=18% Similarity=0.092 Sum_probs=50.4
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
...+++|.|+| .|.||+.+++.|...|.+|++++|....... ...++ ....+.++++++|+|+.+...
T Consensus 147 ~L~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-~~~~~--------~~~~l~ell~~aDiV~l~lP~ 214 (333)
T PRK13243 147 DVYGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPEAE-KELGA--------EYRPLEELLRESDFVSLHVPL 214 (333)
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChhhH-HHcCC--------EecCHHHHHhhCCEEEEeCCC
Confidence 45789999999 7999999999999999999999987543211 11111 122466778899999988864
|
|
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.012 Score=53.75 Aligned_cols=71 Identities=14% Similarity=0.139 Sum_probs=45.0
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecc----cchhhHhhhccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDL----RVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl----~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|+|+|.| +|-+|..++..|.+.|++|++++|+++........++.+..++. ...++...+ +.+|+||-+..
T Consensus 1 m~I~IiG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k 75 (304)
T PRK06522 1 MKIAILG-AGAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVK 75 (304)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHc-CCCCEEEEecc
Confidence 5799999 59999999999999999999999965432221111221101111 111122233 67898888875
|
|
| >PLN02948 phosphoribosylaminoimidazole carboxylase | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.03 Score=55.72 Aligned_cols=76 Identities=12% Similarity=0.078 Sum_probs=56.5
Q ss_pred CCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEc
Q 017290 19 EPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNL 97 (374)
Q Consensus 19 ~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~ 97 (374)
++...+++|+|+|+| +|++|+.+++.+.+.|++|++++.++....... .-..+.+++.|.+.+.++.+++|+|...
T Consensus 15 ~~~~~~~~k~IgIIG-gGqlg~mla~aA~~lG~~Vi~ld~~~~apa~~~--AD~~~v~~~~D~~~l~~~a~~~dvIt~e 90 (577)
T PLN02948 15 KPVHGVSETVVGVLG-GGQLGRMLCQAASQMGIKVKVLDPLEDCPASSV--AARHVVGSFDDRAAVREFAKRCDVLTVE 90 (577)
T ss_pred ccccCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCchhhh--CceeeeCCCCCHHHHHHHHHHCCEEEEe
Confidence 344345778999999 579999999999999999999988764322111 1135567888888888888888887544
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.032 Score=52.91 Aligned_cols=67 Identities=15% Similarity=0.095 Sum_probs=49.6
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
..+++|+|+| .|.||+.+++.|...|.+|+++++++.+.......+..+. .+.++++++|+||.+.+
T Consensus 210 l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~--------~l~eal~~aDVVI~aTG 276 (425)
T PRK05476 210 IAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVM--------TMEEAAELGDIFVTATG 276 (425)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEec--------CHHHHHhCCCEEEECCC
Confidence 4678999999 6999999999999999999999988765332222222211 13456678999998875
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.034 Score=49.32 Aligned_cols=99 Identities=19% Similarity=0.219 Sum_probs=59.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhh----ccCCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV----TKGVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~----~~~~d~vi~~a~ 99 (374)
....+|||+|+++ +|..+++.+...|.+|+++++++.+.......+... ..|..+.+....+ -+++|++|++++
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~~ 210 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADH-VIDYKEEDLEEELRLTGGGGADVVIDAVG 210 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCce-eccCCcCCHHHHHHHhcCCCCCEEEECCC
Confidence 3567899999999 999999999889999999988754322211111111 1122222222211 247899999886
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
.. .....+++.++..| +++.++...
T Consensus 211 ~~------------------~~~~~~~~~l~~~G--~~v~~~~~~ 235 (271)
T cd05188 211 GP------------------ETLAQALRLLRPGG--RIVVVGGTS 235 (271)
T ss_pred CH------------------HHHHHHHHhcccCC--EEEEEccCC
Confidence 21 12334455555554 788777653
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.024 Score=52.57 Aligned_cols=97 Identities=11% Similarity=0.107 Sum_probs=58.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCCCCccccc--cccccee----------E-EecccchhhHhhhccCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSE-GHYIIASDWKKNEHMTE--DMFCHEF----------H-LVDLRVMDNCLKVTKGV 91 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~--~~~~i~~----------~-~~dl~~~~~~~~~~~~~ 91 (374)
|+||.|.|. |.||+.+++.+.++ +.+|.++.-........ ...+... + ..++.-...+.+++.++
T Consensus 1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~v 79 (341)
T PRK04207 1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKA 79 (341)
T ss_pred CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccC
Confidence 579999998 99999999998875 67887766432210000 0000000 0 00111112344555789
Q ss_pred CEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecc
Q 017290 92 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~ 143 (374)
|+||.|++... +...++.+.++| +++|+.|+.
T Consensus 80 DVVIdaT~~~~-------------------~~e~a~~~~~aG-k~VI~~~~~ 111 (341)
T PRK04207 80 DIVVDATPGGV-------------------GAKNKELYEKAG-VKAIFQGGE 111 (341)
T ss_pred CEEEECCCchh-------------------hHHHHHHHHHCC-CEEEEcCCC
Confidence 99999987421 245667788888 478877774
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.038 Score=47.27 Aligned_cols=88 Identities=22% Similarity=0.185 Sum_probs=59.7
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-c-ccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-E-DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~-~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
...+++|+|+| .|.+|..-++.|++.|.+|++++........ . ...+++++..+... + .+++++.||-+.+.
T Consensus 6 ~l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~-~----dl~~~~lVi~at~d 79 (205)
T TIGR01470 6 NLEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDA-D----ILEGAFLVIAATDD 79 (205)
T ss_pred EcCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCH-H----HhCCcEEEEECCCC
Confidence 45778999999 6999999999999999999999865542211 1 11256777777652 2 25677777766541
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCC
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV 134 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~ 134 (374)
-.-...+...|++.++
T Consensus 80 ------------------~~ln~~i~~~a~~~~i 95 (205)
T TIGR01470 80 ------------------EELNRRVAHAARARGV 95 (205)
T ss_pred ------------------HHHHHHHHHHHHHcCC
Confidence 1123467777887764
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.032 Score=50.88 Aligned_cols=68 Identities=12% Similarity=0.281 Sum_probs=44.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|+|.|+| .|.+|..+++.|++.|++|++.+|++++.......+... ..+.+++.+..+.+|+||-+..
T Consensus 1 m~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~----~~s~~~~~~~~~~advVi~~vp 68 (299)
T PRK12490 1 MKLGLIG-LGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITA----RHSLEELVSKLEAPRTIWVMVP 68 (299)
T ss_pred CEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCee----cCCHHHHHHhCCCCCEEEEEec
Confidence 4789998 899999999999999999999999865433222222111 1122222222223688888765
|
|
| >TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.53 Score=42.66 Aligned_cols=57 Identities=9% Similarity=0.046 Sum_probs=39.9
Q ss_pred chhHHHHHHHHHhCCCEEEEEeCCCCcccc-----cccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 36 GFIASHIARRLKSEGHYIIASDWKKNEHMT-----EDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 36 G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
=|-|+.+++.|++.||+|++.+|+...... ....++.. .+...++.+++|+||-|..
T Consensus 29 p~gGspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~-------AaS~aEAAa~ADVVIL~LP 90 (341)
T TIGR01724 29 PYGGSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKV-------VSDDKEAAKHGEIHVLFTP 90 (341)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCee-------cCCHHHHHhCCCEEEEecC
Confidence 377999999999999999999987653211 12222222 1234567788999999986
|
This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown. |
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.1 Score=50.80 Aligned_cols=148 Identities=18% Similarity=0.162 Sum_probs=87.6
Q ss_pred CCCeEEEEcCc-chhHHHHHHHHHhCCCEEEEEeCCCCcccc-----------cccccceeEEecccchhhHhhhcc---
Q 017290 25 EKLRISVTGAG-GFIASHIARRLKSEGHYIIASDWKKNEHMT-----------EDMFCHEFHLVDLRVMDNCLKVTK--- 89 (374)
Q Consensus 25 ~~~~ilItGat-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~~i~~~~~dl~~~~~~~~~~~--- 89 (374)
..+..|||||+ |.||..+++.||.-|.+|++.+.+-++... .....+-++..++..+.++..+++
T Consensus 395 ~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg 474 (866)
T COG4982 395 GDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIG 474 (866)
T ss_pred ccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhc
Confidence 56789999977 999999999999999999998866543111 011133455555554444443321
Q ss_pred ------------------CCCEEEEcccccCCcccccCCc--ceehhhhHHHHHHHHHHHHhCC----CC---eEEEeec
Q 017290 90 ------------------GVDHVFNLAADMGGMGFIQSNH--SVIMYNNTMISFNMLEASRISG----VK---RFFYASS 142 (374)
Q Consensus 90 ------------------~~d~vi~~a~~~~~~~~~~~~~--~~~~~~n~~~~~~ll~a~~~~~----~~---~~i~~Ss 142 (374)
.++.+|-+|++.-.-....... +...++-+.....++-..++.+ +. |+|...|
T Consensus 475 ~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgS 554 (866)
T COG4982 475 DEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGS 554 (866)
T ss_pred cccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCC
Confidence 3588888888642111222222 2223333444555555554433 22 5555544
Q ss_pred ccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh
Q 017290 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF 190 (374)
Q Consensus 143 ~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~ 190 (374)
.. .+ .+.....|+.+|+..|..+..|..+.
T Consensus 555 PN-----rG-------------~FGgDGaYgEsK~aldav~~RW~sEs 584 (866)
T COG4982 555 PN-----RG-------------MFGGDGAYGESKLALDAVVNRWHSES 584 (866)
T ss_pred CC-----CC-------------ccCCCcchhhHHHHHHHHHHHhhccc
Confidence 20 00 22344789999999999998886554
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.038 Score=50.85 Aligned_cols=98 Identities=20% Similarity=0.224 Sum_probs=61.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhh---Hhhhc--cCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDN---CLKVT--KGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~---~~~~~--~~~d~vi~~a~ 99 (374)
.+.+++|+|++|-+|..+++.+...|.+|++++++..+.......+... ..|..+.+. +.... +++|++|++++
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g 244 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADY-VIDYRKEDFVREVRELTGKRGVDVVVEHVG 244 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCe-EEecCChHHHHHHHHHhCCCCCcEEEECCc
Confidence 4578999999999999999999999999999887764422211111111 123333332 22222 26899999987
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
.. ....+++..+..| +++.+|+..
T Consensus 245 ~~-------------------~~~~~~~~l~~~G--~~v~~~~~~ 268 (342)
T cd08266 245 AA-------------------TWEKSLKSLARGG--RLVTCGATT 268 (342)
T ss_pred HH-------------------HHHHHHHHhhcCC--EEEEEecCC
Confidence 21 1123344455444 788887753
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.034 Score=51.94 Aligned_cols=72 Identities=15% Similarity=0.138 Sum_probs=46.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC---CcccccccccceeEEecccchhhH-hhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK---NEHMTEDMFCHEFHLVDLRVMDNC-LKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~~~~~~i~~~~~dl~~~~~~-~~~~~~~d~vi~~a~ 99 (374)
...+|+|+|+ |-+|...++.+...|.+|++++|+. .+.......+...+ +..+.+.. .....++|+||.+.+
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v--~~~~~~~~~~~~~~~~d~vid~~g 247 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV--NSSKTPVAEVKLVGEFDLIIEATG 247 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEe--cCCccchhhhhhcCCCCEEEECcC
Confidence 4578999985 9999999998888899999999842 22222222333432 32221111 112347899999997
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.023 Score=51.20 Aligned_cols=56 Identities=13% Similarity=0.170 Sum_probs=46.9
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEe-CCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASD-WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
+..+++|.|.|-+|.+|+.++..|+++|+.|++.. |.. .+.++.+.+|+||-+.+.
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~----------------------~l~e~~~~ADIVIsavg~ 211 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR----------------------DLPAVCRRADILVAAVGR 211 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC----------------------CHHHHHhcCCEEEEecCC
Confidence 56889999999999999999999999999999985 432 135566788999999874
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.0053 Score=45.47 Aligned_cols=66 Identities=18% Similarity=0.224 Sum_probs=44.2
Q ss_pred eEEEEcCcchhHHHHHHHHHhCC---CEEEEE-eCCCCcccccc-cccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 28 RISVTGAGGFIASHIARRLKSEG---HYIIAS-DWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g---~~V~~~-~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
||.|.| +|.+|..|++.|++.| ++|+++ +|++++..... ..++.+... +..++++.+|+||.+..+
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~advvilav~p 71 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD------DNEEAAQEADVVILAVKP 71 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE------EHHHHHHHTSEEEE-S-G
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC------ChHHhhccCCEEEEEECH
Confidence 578885 9999999999999999 999965 88876543332 112222221 234456688999999864
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.035 Score=51.62 Aligned_cols=77 Identities=13% Similarity=0.032 Sum_probs=52.3
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc----cccceeEEecccchhhHhhhccCCCEEEEcc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED----MFCHEFHLVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
...+++|.|+| .|-||+.+++.|..-|.+|++++|+........ ...+..+........++.++++++|+|+.+.
T Consensus 156 ~l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 156 TLFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 35679999999 799999999999999999999998743211100 0000000001113456888899999999998
Q ss_pred cc
Q 017290 99 AD 100 (374)
Q Consensus 99 ~~ 100 (374)
..
T Consensus 235 Pl 236 (347)
T PLN02928 235 TL 236 (347)
T ss_pred CC
Confidence 74
|
|
| >PLN02775 Probable dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.19 Score=44.89 Aligned_cols=94 Identities=17% Similarity=0.117 Sum_probs=57.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEE-EeCCCCccccc-ccccceeEEecccchhhHhhhc--cCCC-EEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIA-SDWKKNEHMTE-DMFCHEFHLVDLRVMDNCLKVT--KGVD-HVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~-~~~~i~~~~~dl~~~~~~~~~~--~~~d-~vi~~a~ 99 (374)
+.++|+|.|++|.+|+.+++.+.+.+.++.. +++.+...... .-.+..+......|.+.+.... +.+| ++|++..
T Consensus 10 ~~i~V~V~Ga~G~MG~~~~~av~~~~~~Lv~~~~~~~~~~~~~~~~~g~~v~~~~~~dl~~~l~~~~~~~~~~VvIDFT~ 89 (286)
T PLN02775 10 SAIPIMVNGCTGKMGHAVAEAAVSAGLQLVPVSFTGPAGVGVTVEVCGVEVRLVGPSEREAVLSSVKAEYPNLIVVDYTL 89 (286)
T ss_pred CCCeEEEECCCChHHHHHHHHHhcCCCEEEEEeccccccccccceeccceeeeecCccHHHHHHHhhccCCCEEEEECCC
Confidence 4478999999999999999999998888775 34333211110 0011111111122333333222 2689 8999985
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEE
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i 138 (374)
+ ..+...++.|.++|++ +|
T Consensus 90 P-------------------~a~~~~~~~~~~~g~~-~V 108 (286)
T PLN02775 90 P-------------------DAVNDNAELYCKNGLP-FV 108 (286)
T ss_pred h-------------------HHHHHHHHHHHHCCCC-EE
Confidence 3 3356778899999984 44
|
|
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.073 Score=49.69 Aligned_cols=58 Identities=16% Similarity=0.135 Sum_probs=45.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSE-GHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
..++|+|.|.+|-||..+++.|.+. +++|+++++.... .....+.++++|+||-|...
T Consensus 3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~------------------~~~~~~~v~~aDlVilavPv 61 (370)
T PRK08818 3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG------------------SLDPATLLQRADVLIFSAPI 61 (370)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc------------------cCCHHHHhcCCCEEEEeCCH
Confidence 4689999999999999999999875 8999999874210 11234456789999999874
|
|
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.024 Score=53.60 Aligned_cols=69 Identities=19% Similarity=0.177 Sum_probs=53.4
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEccc
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAA 99 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~ 99 (374)
||+|+| +|.+|..+++.+.+.|++|++++.++........ -..+..|..|.+.+.++.+ ++|.|+....
T Consensus 1 kililG-~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~~id~v~~~~e 71 (380)
T TIGR01142 1 RVLLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA--HRSYVINMLDGDALRAVIEREKPDYIVPEIE 71 (380)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCchhhhC--ceEEEcCCCCHHHHHHHHHHhCCCEEEeccC
Confidence 689999 6999999999999999999999987654322111 1455678888888888876 7999886543
|
This enzyme is an alternative to PurN (TIGR00639) |
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.032 Score=50.88 Aligned_cols=68 Identities=15% Similarity=0.179 Sum_probs=45.6
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|+|.|.| .|.+|+.+++.|++.|++|++.+|++.........++.+ ..+.+++.+.++.+|+||-+..
T Consensus 1 m~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~----~~~~~e~~~~~~~~dvvi~~v~ 68 (301)
T PRK09599 1 MQLGMIG-LGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATG----ADSLEELVAKLPAPRVVWLMVP 68 (301)
T ss_pred CEEEEEc-ccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCee----cCCHHHHHhhcCCCCEEEEEec
Confidence 5799998 899999999999999999999999876543322222221 1123333332334688887765
|
|
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.033 Score=50.86 Aligned_cols=31 Identities=26% Similarity=0.393 Sum_probs=29.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDW 58 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r 58 (374)
|+|+|.| +|.+|..++..|.+.|++|++++|
T Consensus 1 mkI~IiG-~G~iG~~~a~~L~~~g~~V~~~~r 31 (305)
T PRK12921 1 MRIAVVG-AGAVGGTFGGRLLEAGRDVTFLVR 31 (305)
T ss_pred CeEEEEC-CCHHHHHHHHHHHHCCCceEEEec
Confidence 6899998 799999999999999999999999
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.0094 Score=55.11 Aligned_cols=73 Identities=15% Similarity=0.088 Sum_probs=47.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccccc--ceeEEe-----cccchhhHhhhccCCCEEEEcc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFC--HEFHLV-----DLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--i~~~~~-----dl~~~~~~~~~~~~~d~vi~~a 98 (374)
+|+|.|.| .|-+|..++..|++.||+|++++|++.......... .....+ .+....+..++++.+|+||-+.
T Consensus 4 ~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v 82 (328)
T PRK14618 4 GMRVAVLG-AGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAV 82 (328)
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEEC
Confidence 57899998 799999999999999999999999754321111100 000000 0111223445567899998887
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
.
T Consensus 83 ~ 83 (328)
T PRK14618 83 P 83 (328)
T ss_pred c
Confidence 5
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.019 Score=53.22 Aligned_cols=74 Identities=18% Similarity=0.174 Sum_probs=48.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc----CCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK----GVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~----~~d~vi~~a~ 99 (374)
.+++|||.||+|-+|++.++.+...+ ..|++..+.++. ......+ .-...|+.+.+..++..+ ++|+|++|.+
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~lG-Ad~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg 234 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKLG-ADEVVDYKDENVVELIKKYTGKGVDVVLDCVG 234 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHcC-CcEeecCCCHHHHHHHHhhcCCCccEEEECCC
Confidence 56799999999999999999888889 445444443332 2222222 122356666554444444 6999999998
Q ss_pred c
Q 017290 100 D 100 (374)
Q Consensus 100 ~ 100 (374)
.
T Consensus 235 ~ 235 (347)
T KOG1198|consen 235 G 235 (347)
T ss_pred C
Confidence 4
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.051 Score=51.46 Aligned_cols=68 Identities=16% Similarity=0.091 Sum_probs=50.4
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
...+++|+|.| .|.||..+++.+...|.+|+++++++.+.......+...+ + +.++++++|+||.+.+
T Consensus 199 ~l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~--~------~~e~v~~aDVVI~atG 266 (413)
T cd00401 199 MIAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM--T------MEEAVKEGDIFVTTTG 266 (413)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc--c------HHHHHcCCCEEEECCC
Confidence 34678999999 7999999999999999999999988765433333333322 1 1345678999999876
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.052 Score=50.99 Aligned_cols=69 Identities=17% Similarity=0.115 Sum_probs=50.2
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
...+++|.|+| .|.||+.+++.|..-|.+|++.+|...........++ ...+++.++++.+|+|+.+..
T Consensus 196 ~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~-------~~~~~l~ell~~sDvV~l~lP 264 (386)
T PLN03139 196 DLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGA-------KFEEDLDAMLPKCDVVVINTP 264 (386)
T ss_pred CCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCc-------eecCCHHHHHhhCCEEEEeCC
Confidence 45789999999 8999999999999999999999887432111111111 112357778889999988875
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.044 Score=50.15 Aligned_cols=73 Identities=15% Similarity=0.117 Sum_probs=55.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
...+|+|+|.. -+|...++.+...|.+|++++|++++.......+...+...- +.+....+-+.+|++|.+++
T Consensus 166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~-~~~~~~~~~~~~d~ii~tv~ 238 (339)
T COG1064 166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSS-DSDALEAVKEIADAIIDTVG 238 (339)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcC-CchhhHHhHhhCcEEEECCC
Confidence 46899999965 999999999988999999999999876555555544444433 55555555445999999997
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.039 Score=44.96 Aligned_cols=59 Identities=19% Similarity=0.228 Sum_probs=43.7
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
.+..+|+|+|+|.+..+|+.++..|+++|..|+...... .++.+..+++|+||-.+|..
T Consensus 32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T---------------------~~l~~~~~~ADIVVsa~G~~ 90 (160)
T PF02882_consen 32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT---------------------KNLQEITRRADIVVSAVGKP 90 (160)
T ss_dssp -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS---------------------SSHHHHHTTSSEEEE-SSST
T ss_pred CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC---------------------CcccceeeeccEEeeeeccc
Confidence 356889999999999999999999999999999877653 22455667889999988854
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.044 Score=50.31 Aligned_cols=96 Identities=14% Similarity=0.036 Sum_probs=60.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccc--hhhHhhhc-cCCCEEEEcccccC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRV--MDNCLKVT-KGVDHVFNLAADMG 102 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~--~~~~~~~~-~~~d~vi~~a~~~~ 102 (374)
..+|||.|++|.+|..+++.+...|.+|+++++++.+.......++..+ .+..+ .+.+.... +++|+||++.+.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~d~vld~~g~-- 223 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEV-IPREELQEESIKPLEKQRWAGAVDPVGG-- 223 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEE-EcchhHHHHHHHhhccCCcCEEEECCcH--
Confidence 4689999999999999999998899999999888765333222233211 11121 22222222 368999998762
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecc
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~ 143 (374)
......++.++..| ++|.++..
T Consensus 224 -----------------~~~~~~~~~l~~~G--~~i~~g~~ 245 (326)
T cd08289 224 -----------------KTLAYLLSTLQYGG--SVAVSGLT 245 (326)
T ss_pred -----------------HHHHHHHHHhhcCC--EEEEEeec
Confidence 11234455555555 78877754
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >PRK15057 UDP-glucose 6-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.03 Score=52.83 Aligned_cols=71 Identities=11% Similarity=0.139 Sum_probs=44.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccc-------ccee----EEecccchhhHhhhccCCCEEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMF-------CHEF----HLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------~i~~----~~~dl~~~~~~~~~~~~~d~vi 95 (374)
|+|.|.| .|++|..++..|. .||+|+++++++.+....... ++.- ..+.+....+..++.+++|+||
T Consensus 1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vi 78 (388)
T PRK15057 1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVI 78 (388)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEE
Confidence 5799997 8999999996665 599999999987653322110 0000 0111211122334557899999
Q ss_pred Eccc
Q 017290 96 NLAA 99 (374)
Q Consensus 96 ~~a~ 99 (374)
-|.+
T Consensus 79 i~Vp 82 (388)
T PRK15057 79 IATP 82 (388)
T ss_pred EeCC
Confidence 9876
|
|
| >PLN02545 3-hydroxybutyryl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.033 Score=50.67 Aligned_cols=37 Identities=24% Similarity=0.277 Sum_probs=33.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
..++|.|+| .|.+|..++..|+..|++|+++++++..
T Consensus 3 ~~~~V~vIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~ 39 (295)
T PLN02545 3 EIKKVGVVG-AGQMGSGIAQLAAAAGMDVWLLDSDPAA 39 (295)
T ss_pred CcCEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence 457899998 7999999999999999999999988754
|
|
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.048 Score=50.72 Aligned_cols=72 Identities=19% Similarity=0.173 Sum_probs=47.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccccccceeEEecccchhhHhhhc---cCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT---KGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~---~~~d~vi~~a~ 99 (374)
...+|+|+|+ |-+|...++.+...|. +|+++++++++.......+...+ .|..+.+ +.+.. .++|+||.+++
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~-~~~~~~~~g~~D~vid~~G 244 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKL-VNPQNDD-LDHYKAEKGYFDVSFEVSG 244 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEE-ecCCccc-HHHHhccCCCCCEEEECCC
Confidence 4678999985 9999999998888897 68888888765443333343322 2322211 22222 24899999987
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 374 | ||||
| 2c59_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 0.0 | ||
| 2c54_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 0.0 | ||
| 2c5a_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 0.0 | ||
| 2c5e_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 0.0 | ||
| 4ef7_B | 337 | Udp-Xylose Synthase Length = 337 | 7e-25 | ||
| 3ehe_A | 313 | Crystal Structure Of Udp-Glucose 4 Epimerase (Gale- | 3e-24 | ||
| 2b69_A | 343 | Crystal Structure Of Human Udp-Glucoronic Acid Deca | 4e-24 | ||
| 3aw9_A | 308 | Structure Of Udp-Galactose 4-Epimerase Mutant Lengt | 7e-24 | ||
| 3icp_A | 312 | Crystal Structure Of Udp-Galactose 4-Epimerase Leng | 9e-24 | ||
| 1e6u_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Le | 4e-18 | ||
| 1e7s_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K1 | 5e-18 | ||
| 1e7q_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S1 | 6e-18 | ||
| 1bsv_A | 321 | Gdp-Fucose Synthetase From Escherichia Coli Complex | 7e-18 | ||
| 3ruc_A | 351 | Specific Recognition Of N-Acetylated Substrates And | 1e-17 | ||
| 1e7r_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y1 | 1e-17 | ||
| 1bws_A | 321 | Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose E | 1e-17 | ||
| 3lu1_A | 364 | Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4- | 2e-17 | ||
| 3ru9_A | 351 | Specific Recognition Of N-Acetylated Substrates And | 2e-17 | ||
| 3ru7_A | 351 | Specific Recognition Of N-Acetylated Substrates And | 2e-17 | ||
| 1r6d_A | 337 | Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc | 7e-15 | ||
| 1r66_A | 337 | Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr | 1e-14 | ||
| 1sb8_A | 352 | Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A | 4e-14 | ||
| 3vps_A | 321 | Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5 | 7e-14 | ||
| 2p5u_A | 311 | Crystal Structure Of Thermus Thermophilus Hb8 Udp-G | 7e-12 | ||
| 2pzj_A | 377 | Crystal Structure Of The Bordetella Bronchiseptica | 1e-11 | ||
| 3m2p_A | 311 | The Crystal Structure Of Udp-N-Acetylglucosamine 4- | 2e-11 | ||
| 2c20_A | 330 | Crystal Structure Of Udp-Glucose 4-Epimerase Length | 4e-11 | ||
| 2hun_A | 336 | Crystal Structure Of Hypothetical Protein Ph0414 Fr | 1e-10 | ||
| 3sxp_A | 362 | Crystal Structure Of Helicobacter Pylori Adp-L-Glyc | 3e-10 | ||
| 1kep_A | 348 | The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra | 2e-09 | ||
| 4id9_A | 347 | Crystal Structure Of A Short-Chain DehydrogenaseRED | 2e-08 | ||
| 3rft_A | 267 | Crystal Structure Of Uronate Dehydrogenase From Agr | 8e-08 | ||
| 3ay3_A | 267 | Crystal Structure Of Glucuronic Acid Dehydrogeanse | 1e-07 | ||
| 1lrj_A | 338 | Crystal Structure Of E. Coli Udp-Galactose 4-Epimer | 3e-07 | ||
| 1lrk_A | 338 | Crystal Structure Of Escherichia Coli Udp-Galactose | 5e-07 | ||
| 1kvs_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 5e-07 | ||
| 1kvq_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 5e-07 | ||
| 1eq2_A | 310 | The Crystal Structure Of Adp-L-Glycero-D-Mannohepto | 7e-07 | ||
| 3rfx_A | 267 | Crystal Structure Of Uronate Dehydrogenase From Agr | 7e-07 | ||
| 2udp_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 7e-07 | ||
| 4egb_A | 346 | 3.0 Angstrom Resolution Crystal Structure Of Dtdp-G | 9e-07 | ||
| 1kvt_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 1e-06 | ||
| 1kvr_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 1e-06 | ||
| 1a9z_A | 338 | Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX | 2e-06 | ||
| 1kvu_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 2e-06 | ||
| 2x6t_A | 357 | Agme Bound To Adp-B-Mannose Length = 357 | 4e-06 | ||
| 1a9y_A | 338 | Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX | 4e-06 | ||
| 1g1a_A | 361 | The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra | 4e-06 | ||
| 1orr_A | 347 | Crystal Structure Of Cdp-tyvelose 2-epimerase Compl | 1e-05 | ||
| 3a1n_A | 317 | Crystal Structure Of L-Threonine Dehydrogenase From | 9e-05 | ||
| 4b8w_A | 319 | Crystal Structure Of Human Gdp-L-Fucose Synthase Wi | 1e-04 | ||
| 4b8z_A | 320 | Crystal Structure Of Human Gdp-l-fucose Synthase Wi | 1e-04 | ||
| 2pk3_A | 321 | Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose | 2e-04 | ||
| 1z45_A | 699 | Crystal Structure Of The Gal10 Fusion Protein Galac | 2e-04 | ||
| 1z73_A | 358 | Crystal Structure Of E. Coli Arna Dehydrogenase (de | 3e-04 | ||
| 3a9w_A | 317 | Crystal Structure Of L-Threonine Bound L-Threonine | 3e-04 | ||
| 2q1w_A | 333 | Crystal Structure Of The Bordetella Bronchiseptica | 3e-04 | ||
| 2bll_A | 345 | Apo-Structure Of The C-Terminal Decarboxylase Domai | 4e-04 | ||
| 1z74_A | 358 | Crystal Structure Of E.Coli Arna Dehydrogenase (Dec | 5e-04 | ||
| 1z7e_A | 660 | Crystal Structure Of Full Length Arna Length = 660 | 6e-04 | ||
| 1z7b_A | 358 | Crystal Structure Of E.Coli Arna Dehydrogenase (Dec | 6e-04 | ||
| 1z75_A | 358 | Crystal Structure Of Arna Dehydrogenase (decarboxyl | 6e-04 | ||
| 1u9j_A | 358 | Crystal Structure Of E. Coli Arna (Pmri) Decarboxyl | 6e-04 |
| >pdb|2C59|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), With Gdp-Alpha-D-Mannose And Gdp-Beta-L-Galactose Bound In The Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|2C54|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K178r, With Gdp-Beta-L-Gulose And Gdp-4-Keto-Beta-L-Gulose Bound In Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|2C5A|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), Y174f, With Gdp-Beta-L-Galactose Bound In The Active Site Length = 379 | Back alignment and structure |
|
| >pdb|2C5E|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K217a, With Gdp-Alpha-D-Mannose Bound In The Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313 | Back alignment and structure |
|
| >pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343 | Back alignment and structure |
|
| >pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308 | Back alignment and structure |
|
| >pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312 | Back alignment and structure |
|
| >pdb|1E6U|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Length = 321 | Back alignment and structure |
|
| >pdb|1E7S|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K140r Length = 321 | Back alignment and structure |
|
| >pdb|1E7Q|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S107a Length = 321 | Back alignment and structure |
|
| >pdb|1BSV|A Chain A, Gdp-Fucose Synthetase From Escherichia Coli Complex With Nadph Length = 321 | Back alignment and structure |
|
| >pdb|3RUC|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351 | Back alignment and structure |
|
| >pdb|1E7R|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y136e Length = 321 | Back alignment and structure |
|
| >pdb|1BWS|A Chain A, Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose EpimeraseREDUCTASE From Escherichia Coli A Key Enzyme In The Biosynthesis Of Gdp-L- Fucose Length = 321 | Back alignment and structure |
|
| >pdb|3LU1|A Chain A, Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-Epimerase Length = 364 | Back alignment and structure |
|
| >pdb|3RU9|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351 | Back alignment and structure |
|
| >pdb|3RU7|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351 | Back alignment and structure |
|
| >pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337 | Back alignment and structure |
|
| >pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337 | Back alignment and structure |
|
| >pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352 | Back alignment and structure |
|
| >pdb|3VPS|A Chain A, Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5,6-Dehydratase, Tuna, Involved In Tunicamycin Biosynthesis Length = 321 | Back alignment and structure |
|
| >pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad Length = 311 | Back alignment and structure |
|
| >pdb|2PZJ|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmf In Complex With Nad+ Length = 377 | Back alignment and structure |
|
| >pdb|3M2P|A Chain A, The Crystal Structure Of Udp-N-Acetylglucosamine 4-Epimerase From Bacillus Cereus Length = 311 | Back alignment and structure |
|
| >pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase Length = 330 | Back alignment and structure |
|
| >pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 Length = 336 | Back alignment and structure |
|
| >pdb|3SXP|A Chain A, Crystal Structure Of Helicobacter Pylori Adp-L-Glycero-D-Manno- Heptose-6-Epimerase (Rfad, Hp0859) Length = 362 | Back alignment and structure |
|
| >pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound Length = 348 | Back alignment and structure |
|
| >pdb|4ID9|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SUPERFAMILY Protein From Agrobacterium Tumefaciens (Target Efi-506441) With Bound Nad, Monoclinic Form 1 Length = 347 | Back alignment and structure |
|
| >pdb|3RFT|A Chain A, Crystal Structure Of Uronate Dehydrogenase From Agrobacterium Tumefaciens Length = 267 | Back alignment and structure |
|
| >pdb|3AY3|A Chain A, Crystal Structure Of Glucuronic Acid Dehydrogeanse From Chromohalobacter Salexigens Length = 267 | Back alignment and structure |
|
| >pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338 | Back alignment and structure |
|
| >pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338 | Back alignment and structure |
|
| >pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1EQ2|A Chain A, The Crystal Structure Of Adp-L-Glycero-D-Mannoheptose 6- Epimerase Length = 310 | Back alignment and structure |
|
| >pdb|3RFX|A Chain A, Crystal Structure Of Uronate Dehydrogenase From Agrobacterium Tumefaciens, Y136a Mutant Complexed With Nad Length = 267 | Back alignment and structure |
|
| >pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|4EGB|A Chain A, 3.0 Angstrom Resolution Crystal Structure Of Dtdp-Glucose 4,6- Dehydratase (Rfbb) From Bacillus Anthracis Str. Ames In Complex With Nad Length = 346 | Back alignment and structure |
|
| >pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338 | Back alignment and structure |
|
| >pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|2X6T|A Chain A, Agme Bound To Adp-B-Mannose Length = 357 | Back alignment and structure |
|
| >pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338 | Back alignment and structure |
|
| >pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium Length = 361 | Back alignment and structure |
|
| >pdb|1ORR|A Chain A, Crystal Structure Of Cdp-tyvelose 2-epimerase Complexed With Nad And Cdp Length = 347 | Back alignment and structure |
|
| >pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317 | Back alignment and structure |
|
| >pdb|4B8W|A Chain A, Crystal Structure Of Human Gdp-L-Fucose Synthase With Bound Nadp And Gdp, Tetragonal Crystal Form Length = 319 | Back alignment and structure |
|
| >pdb|4B8Z|A Chain A, Crystal Structure Of Human Gdp-l-fucose Synthase With Bound Nadp And Gdp, Rhombohedral Crystal Form Length = 320 | Back alignment and structure |
|
| >pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase Length = 321 | Back alignment and structure |
|
| >pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699 | Back alignment and structure |
|
| >pdb|1Z73|A Chain A, Crystal Structure Of E. Coli Arna Dehydrogenase (decarboxylase) Domain, S433a Mutant Length = 358 | Back alignment and structure |
|
| >pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317 | Back alignment and structure |
|
| >pdb|2Q1W|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmh In Complex With Nad+ Length = 333 | Back alignment and structure |
|
| >pdb|2BLL|A Chain A, Apo-Structure Of The C-Terminal Decarboxylase Domain Of Arna Length = 345 | Back alignment and structure |
|
| >pdb|1Z74|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619y Mutant Length = 358 | Back alignment and structure |
|
| >pdb|1Z7E|A Chain A, Crystal Structure Of Full Length Arna Length = 660 | Back alignment and structure |
|
| >pdb|1Z7B|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619e Mutant Length = 358 | Back alignment and structure |
|
| >pdb|1Z75|A Chain A, Crystal Structure Of Arna Dehydrogenase (decarboxylase) Domain, R619m Mutant Length = 358 | Back alignment and structure |
|
| >pdb|1U9J|A Chain A, Crystal Structure Of E. Coli Arna (Pmri) Decarboxylase Domain Length = 358 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 374 | |||
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 0.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 9e-70 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 9e-64 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 4e-62 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 1e-60 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 7e-59 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 9e-58 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 1e-57 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 7e-55 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 1e-54 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 3e-54 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 8e-54 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 5e-49 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 4e-48 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 9e-46 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 9e-44 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 9e-43 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 1e-42 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 2e-41 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 1e-37 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 6e-37 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 7e-35 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 1e-33 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 1e-30 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 3e-30 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 3e-25 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 4e-19 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 5e-19 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 4e-14 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 9e-13 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 4e-12 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 2e-11 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 7e-11 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 2e-10 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 1e-09 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 3e-09 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 6e-09 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 6e-09 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 9e-09 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 9e-09 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 1e-08 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 2e-08 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 2e-08 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 3e-08 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 3e-08 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 6e-08 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 7e-08 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 9e-08 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 1e-07 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 3e-07 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 4e-07 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 4e-07 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 1e-06 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 2e-06 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 5e-06 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 9e-06 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 2e-05 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 3e-05 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 5e-05 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 7e-05 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 1e-04 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 1e-04 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 1e-04 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 2e-04 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 4e-04 |
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 548 bits (1414), Expect = 0.0
Identities = 340/377 (90%), Positives = 363/377 (96%), Gaps = 3/377 (0%)
Query: 1 MGSTEGT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWK 59
MG+T GT YGAYTY+ELERE YWPSE L+IS+TGAGGFIASHIARRLK EGHY+IASDWK
Sbjct: 3 MGTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWK 62
Query: 60 KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 119
KNEHMTEDMFC EFHLVDLRVM+NCLKVT+GVDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 63 KNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 122
Query: 120 MISFNMLEASRISGVKRFFYASSACIYPEFKQLE-TNVSLKESDAWPAEPQDAYGLEKLA 178
MISFNM+EA+RI+G+KRFFYASSACIYPEFKQLE TNVSLKESDAWPAEPQDA+GLEKLA
Sbjct: 123 MISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLA 182
Query: 179 SEELCKHYTKDFGIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDGL 237
+EELCKHY KDFGIECR+GRFHNIYGPFGTWK G EKAPAAFCRKA TSTD+FEMWGDGL
Sbjct: 183 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGL 242
Query: 238 QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP 297
QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAE+VLSFE+KKLPIHHIPGP
Sbjct: 243 QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGP 302
Query: 298 EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVG 357
EGVRGRNSDN LIKEKLGWAP+M+LK+GLRITYFWIKEQIEKEK +G D+S+YGSSKVVG
Sbjct: 303 EGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYGSSKVVG 362
Query: 358 TQAPVQLGSLRAADGKE 374
TQAPVQLGSLRAADGKE
Sbjct: 363 TQAPVQLGSLRAADGKE 379
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 220 bits (563), Expect = 9e-70
Identities = 62/312 (19%), Positives = 130/312 (41%), Gaps = 24/312 (7%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
+I+VTG GF+ ++ +K++G+ I + + +E+ + D + D +
Sbjct: 4 KIAVTGGTGFLGQYVVESIKNDGNTPIILT---RSIGNKAINDYEYRVSDYTLED-LINQ 59
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVI-MYNNTMISFNMLEASRISGVKRFFYASSACIY 146
VD V +LAA G Q + ++N +++ N+ +A + + YAS+ Y
Sbjct: 60 LNDVDAVVHLAATRG----SQ--GKISEFHDNEILTQNLYDACYENNISNIVYASTISAY 113
Query: 147 PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPF 206
+ ET++ E + P YG+ KLA E + Y++ G+ + RF ++YG
Sbjct: 114 SD----ETSLPWNEKE--LPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGF- 166
Query: 207 GTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR-LTKSDFREPVN 265
+ F R+A ++ + + + R F + + + V+ L + N
Sbjct: 167 --NEKNNYMINRFFRQAFHG-EQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFN 223
Query: 266 IGSDEMVSMNEMAEIVLSFEDKKL-PIHHIPGPEG-VRGRNSDNTLIKEKLGWAPSMKLK 323
IGS + ++ E+A + + K + P + D++ KE L ++
Sbjct: 224 IGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFA 283
Query: 324 DGLRITYFWIKE 335
+ + ++
Sbjct: 284 TAVEEIHLLMRG 295
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 205 bits (523), Expect = 9e-64
Identities = 68/334 (20%), Positives = 123/334 (36%), Gaps = 44/334 (13%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIA-----SDWKKNEHMTEDMFCHEFHLVDLRVMD 82
RI +TG GFI H+AR L + G + ++ V++
Sbjct: 9 RILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPE-------GTGKFLEKPVLE 61
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSV---IMYN-NTMISFNMLEASRISGVKRFF 138
+ V V++LA+ + S + Y N ++L GV +
Sbjct: 62 LEERDLSDVRLVYHLASHKS----VP--RSFKQPLDYLDNVDSGRHLLALCTSVGVPKVV 115
Query: 139 YASSACIY---PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC- 194
S+ +Y E + P P+ Y K+ E + + +
Sbjct: 116 VGSTCEVYGQADTLPTPEDS---------PLSPRSPYAASKVGLEMVAGAHQRASVAPEV 166
Query: 195 RVGRFHNIYGPFGTWKGMEKAPAAFCRKALT--STDKFEMWGDGLQTRSFTFIDECVEGV 252
+ RF N+YGP + + C LT GDG Q R FT+I + V+ +
Sbjct: 167 GIVRFFNVYGP---GERPDALVPRLCANLLTRNELPVE---GDGEQRRDFTYITDVVDKL 220
Query: 253 LRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKE 312
+ L VN GS + +S+N++ I+ + P P + +D L
Sbjct: 221 VALANRPLPSVVNFGSGQSLSVNDVIRILQATSPAAEVARKQPRPNEITEFRADTALQTR 280
Query: 313 KLGW-APSMKLKDGLRITYFWIKEQIEKEKTQGI 345
++G + + +++G+R+T W + + + Q I
Sbjct: 281 QIGERSGGIGIEEGIRLTLEWWQSRDLDDIRQRI 314
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 202 bits (517), Expect = 4e-62
Identities = 64/338 (18%), Positives = 116/338 (34%), Gaps = 39/338 (11%)
Query: 28 RISVTGAGGFIASHIARRLKSEG-HYIIASD-----WKKNEHMTEDMFCHEFHLVDLRVM 81
+ V G GF+ S++ +RL G + + D K N D F +
Sbjct: 34 NVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VPDHPAVRFSETSITDD 90
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSN--HSV---IMYNNTMI--SFNMLEASR-ISG 133
+ D+VF+LA S+ + + + + E +
Sbjct: 91 ALLASLQDEYDYVFHLAT--------YHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR 142
Query: 134 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
+K+ Y+++ C E + + + Y + K+ E +Y K +
Sbjct: 143 LKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLP 202
Query: 194 CRVGRFHNIYGPF-----GTWKGMEKAPAA-----FCRKALTSTDKFEMWGDGLQTRSFT 243
RF N+YGP G W+G F KAL + G+ TR F
Sbjct: 203 TVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMP-LPLENGGVATRDFI 261
Query: 244 FIDECVEGVLRLTKSDFR-EPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG--V 300
F+++ G++ NI S + S+ ++A + + +P
Sbjct: 262 FVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNTELDRLPKRPWDNS 321
Query: 301 RGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIE 338
R + +LG++ + + DGLR T W K +
Sbjct: 322 GKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKANLA 359
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 196 bits (502), Expect = 1e-60
Identities = 84/333 (25%), Positives = 145/333 (43%), Gaps = 47/333 (14%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD-----WKKNEHMTEDMFCHEFHLVDLRVMD 82
RI VTG GFI SH+ +L G+ ++ D ++ + E H+ DL+ D
Sbjct: 2 RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVN---PSA--ELHVRDLK--D 54
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSV---IMY--NNTMISFNMLEASRISGVKRF 137
D VF+ AA + S I++ N + +FN+LE +R +GV+
Sbjct: 55 YSWGAGIKGDVVFHFAA------NPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTV 108
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
+ASS+ +Y + + T E + P +P YG K A E +C Y + FG+ C
Sbjct: 109 VFASSSTVYGDADVIPT----PEEE--PYKPISVYGAAKAAGEVMCATYARLFGVRCLAV 162
Query: 198 RFHNIYGPFGTWKGMEKAPAA-FCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 256
R+ N+ GP + F K + + E+ GDG Q +S+ ++ + VE L
Sbjct: 163 RYANVVGP-----RLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAW 217
Query: 257 KSDFR-----EPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSD----- 306
K +N+G+ + V + ++A+IV + I +P RG D
Sbjct: 218 KKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMT 277
Query: 307 --NTLIKEKLGWAPSMKLKDGLRITYFWIKEQI 337
T + + GW P+M + ++ T + +++
Sbjct: 278 LAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKEL 310
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 193 bits (493), Expect = 7e-59
Identities = 78/356 (21%), Positives = 135/356 (37%), Gaps = 53/356 (14%)
Query: 12 TYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASD-----------WKK 60
YEEL +E P++ +TG GFI S++ L ++ D +
Sbjct: 15 RYEELRKE--LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVR 72
Query: 61 NEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSV---IMYN 117
+ + +F D+R +D+C GVD+V + AA + S+ I N
Sbjct: 73 SLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGS----VP--RSINDPITSN 126
Query: 118 --NTMISFNMLEASRISGVKRFFYASSACIY---PEFKQLETNVSLKESDAWPAEPQDAY 172
N NML A+R + V+ F YA+S+ Y P ++E +P Y
Sbjct: 127 ATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDT---------IGKPLSPY 177
Query: 173 GLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAA----FCRKALTSTD 228
+ K +E +++ +G R+ N++G G A AA + + D
Sbjct: 178 AVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNG---AYAAVIPKWTSSMIQG-D 233
Query: 229 KFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREP---VNIGSDEMVSMNEMAEIVLSFE 285
+ GDG +R F +I+ V+ L + NI S+N++ +
Sbjct: 234 DVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGL 293
Query: 286 DKK-----LPIHHIPGPEG-VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKE 335
+ + EG VR +D + + LG+AP + G+ + W
Sbjct: 294 AENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIM 349
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 189 bits (483), Expect = 9e-58
Identities = 87/329 (26%), Positives = 139/329 (42%), Gaps = 41/329 (12%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKN------EHMTEDMFCHEFHLVDLRVM 81
I VTG GFI SH+ +L SE + I+ D N E + E DL
Sbjct: 3 LIVVTGGAGFIGSHVVDKL-SESNEIVVID---NLSSGNEEFVNEAA---RLVKADLAA- 54
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSV---IMY--NNTMISFNMLEASRISGVKR 136
D+ KG + V+++AA NN + ++ +LEA R +GV R
Sbjct: 55 DDIKDYLKGAEEVWHIAA------NPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSR 108
Query: 137 FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRV 196
+ S++ +Y E K + T E P P YG KLA E L + Y F ++ +
Sbjct: 109 IVFTSTSTVYGEAKVIPT----PEDY--PTHPISLYGASKLACEALIESYCHTFDMQAWI 162
Query: 197 GRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR-L 255
RF N+ G T F K + ++ E+ G+G Q +S+ +I +CV+ +L L
Sbjct: 163 YRFANVIGRRST----HGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGL 218
Query: 256 TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRG--RNS--DNTLIK 311
+ NIGS++ + + +AEIV G G +G +K
Sbjct: 219 RGDERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKLK 278
Query: 312 EKLGWAPSMKLKDGLRITYFWIKEQIEKE 340
LGW P ++ +R+ + E +++E
Sbjct: 279 R-LGWKPRYNSEEAVRMAVRDLVEDLDEE 306
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343 | Back alignment and structure |
|---|
Score = 189 bits (483), Expect = 1e-57
Identities = 88/335 (26%), Positives = 153/335 (45%), Gaps = 38/335 (11%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASD-----WKKN-EHMTEDMFCHEFHLV 76
++ RI +TG GF+ SH+ +L +GH + D K+N EH F L+
Sbjct: 24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGH---ENFELI 80
Query: 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKR 136
+ V++ + VD +++LA+ N + NT+ + NML ++ G R
Sbjct: 81 NHDVVE---PLYIEVDQIYHLAS-PASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-AR 135
Query: 137 FFYASSACIY--PEFK-QLET---NVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF 190
AS++ +Y PE Q E +V+ P P+ Y K +E +C Y K
Sbjct: 136 LLLASTSEVYGDPEVHPQSEDYWGHVN-------PIGPRACYDEGKRVAETMCYAYMKQE 188
Query: 191 GIECRVGRFHNIYGPFGTWKGM----EKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFID 246
G+E RV R N +GP M + + F +AL ++G G QTR+F ++
Sbjct: 189 GVEVRVARIFNTFGP-----RMHMNDGRVVSNFILQALQGEP-LTVYGSGSQTRAFQYVS 242
Query: 247 ECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-VRGRNS 305
+ V G++ L S+ PVN+G+ E ++ E A+++ + I + + + R
Sbjct: 243 DLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKP 302
Query: 306 DNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKE 340
D K LGW P + L++GL + ++++E +
Sbjct: 303 DIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQ 337
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 7e-55
Identities = 85/353 (24%), Positives = 148/353 (41%), Gaps = 47/353 (13%)
Query: 12 TYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASD-----------WKK 60
YEE+ ++ +TG GFI S++ +L +I D K
Sbjct: 13 RYEEITQQ--LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVK 70
Query: 61 NEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSV---IMYN 117
TE F D+R + C +V KGVDHV + AA +G + S+ I N
Sbjct: 71 TLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDHVLHQAA----LGSVP--RSIVDPITTN 124
Query: 118 NTMIS--FNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLE 175
T I+ N+L A++ + V+ F YA+S+ Y + + +L + + P Y +
Sbjct: 125 ATNITGFLNILHAAKNAQVQSFTYAASSSTYGD------HPALPKVEENIGNPLSPYAVT 178
Query: 176 KLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAA----FCRKALTSTDKFE 231
K +E + Y + +G + R+ N++G G A AA + L D
Sbjct: 179 KYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNG---AYAAVIPKWTAAMLKG-DDVY 234
Query: 232 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREP---VNIGSDEMVSMNEMAEIV-----LS 283
+ GDG +R F +ID ++ + + N+ + ++NE++ + L
Sbjct: 235 INGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLI 294
Query: 284 FEDKKLPIHHIPGPEG-VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKE 335
KL I + G VR +D T + L + P++K+++GLR++ W
Sbjct: 295 HHIDKLSIKYREFRSGDVRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVR 347
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 181 bits (462), Expect = 1e-54
Identities = 69/321 (21%), Positives = 126/321 (39%), Gaps = 26/321 (8%)
Query: 29 ISVTGAGGFIASHIARRLKSEG-HYIIASDW----KKNEHMTEDMFCHEFHLVDLRVMDN 83
I VTG GFI S+I + L +G I+ D K ++ + D +
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIM 61
Query: 84 CLKVTKGVDHVFNLAADMGGMGFIQ-SNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
+ V+ +F+ A + +M NN S +L + F YASS
Sbjct: 62 AGEEFGDVEAIFHEGA----CSSTTEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASS 116
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG-RFHN 201
A Y T+ ++ + +P + YG K +E + + + VG R+ N
Sbjct: 117 AATYGG----RTSDFIESRE--YEKPLNVYGYSKFLFDEYVRQILPEANSQI-VGFRYFN 169
Query: 202 IYGPFGTWKGMEKAPAAFCRKALTSTDKFEMW-GDGLQTRSFTFIDECVEGVLRLTKSDF 260
+YGP KG + A L + + +++ G R F ++ + + L ++
Sbjct: 170 VYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV 229
Query: 261 REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGR-----NSDNTLIKEKLG 315
N+G+ S +A+ L++ KK I +IP P+ ++GR +D T ++
Sbjct: 230 SGIFNLGTGRAESFQAVADATLAY-HKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGY 288
Query: 316 WAPSMKLKDGLRITYFWIKEQ 336
P + +G+ W+
Sbjct: 289 DKPFKTVAEGVTEYMAWLNRD 309
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 181 bits (462), Expect = 3e-54
Identities = 68/322 (21%), Positives = 126/322 (39%), Gaps = 26/322 (8%)
Query: 28 RISVTGAGGFIASHIARRLKSEG-HYIIASDW----KKNEHMTEDMFCHEFHLVDLRVMD 82
I VTG GFI S+I + L +G I+ D K ++ + D +
Sbjct: 48 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI 107
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQ-SNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ V+ +F+ A + +M NN S +L + F YAS
Sbjct: 108 MAGEEFGDVEAIFHEGA----CSSTTEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYAS 162
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG-RFH 200
SA Y T+ ++ + +P + +G K +E + + + VG R+
Sbjct: 163 SAATYGG----RTSDFIESRE--YEKPLNVFGYSKFLFDEYVRQILPEANSQI-VGFRYF 215
Query: 201 NIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMW-GDGLQTRSFTFIDECVEGVLRLTKSD 259
N+YGP KG + A L + + +++ G R F ++ + + L ++
Sbjct: 216 NVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG 275
Query: 260 FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGR-----NSDNTLIKEKL 314
N+G+ S +A+ L++ KK I +IP P+ ++GR +D T ++
Sbjct: 276 VSGIFNLGTGRAESFQAVADATLAY-HKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAG 334
Query: 315 GWAPSMKLKDGLRITYFWIKEQ 336
P + +G+ W+
Sbjct: 335 YDKPFKTVAEGVTEYMAWLNRD 356
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 179 bits (456), Expect = 8e-54
Identities = 53/333 (15%), Positives = 129/333 (38%), Gaps = 33/333 (9%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHY--IIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
I VTG+ G I + + L + +IASD + D +F +D+ D +
Sbjct: 2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASD-----IVQRDTGGIKFITLDVSNRDEIDR 56
Query: 87 VTK--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI--SFNMLEASRISGVKRFFYASS 142
+ +D +F+LA + + + + ++N+LEA++ V++ S+
Sbjct: 57 AVEKYSIDAIFHLAGILSA----KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPST 112
Query: 143 ACIY-PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
++ PE + + P+ +G+ K+A+E L ++Y + FG++ R R+
Sbjct: 113 IGVFGPETPKNKV------PSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPG 166
Query: 202 IYGPFGTWKGMEKAPAA-FCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD- 259
I A A+ +K++ + + ++ + ++ ++ L ++D
Sbjct: 167 IISYKAEPTAGTTDYAVEIFYYAV-KREKYKCYLAPNRALPMMYMPDALKALVDLYEADR 225
Query: 260 ----FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRG---RNSDNTLIKE 312
R N+ + + +E+ + + + + + + D++
Sbjct: 226 DKLVLRNGYNVTAYT-FTPSELYSKIKERIPEFEIEYKEDFRDKIAATWPESLDSSEASN 284
Query: 313 KLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGI 345
+ G++ L + I E++ E +
Sbjct: 285 EWGFSIEYDLDRTIDDMIDHISEKLGIEGKHAL 317
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 5e-49
Identities = 64/343 (18%), Positives = 123/343 (35%), Gaps = 48/343 (13%)
Query: 28 RISVTGAGGFIASHIARRLKSEG--HYIIASD-------WKKNE------HMTEDMFCHE 72
I +TG GF+ S++A + ++ D + N F E
Sbjct: 12 TILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGE 71
Query: 73 FHLVDLRVMDNCLKVTK-GVDHVFNLAADMGGMGFIQSNHSV-----IMYNNTMISFNML 126
D+ + ++ K D++F+ AA S+ ++ +M N N+L
Sbjct: 72 VIAADINNPLDLRRLEKLHFDYLFHQAA--------VSDTTMLNQELVMKTNYQAFLNLL 123
Query: 127 EASRISGVKRFFYASSACIY---PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELC 183
E +R K YASSA +Y P++ YG KL +E
Sbjct: 124 EIARSKKAK-VIYASSAGVYGNTKAPN--------VVGK--NESPENVYGFSKLCMDEFV 172
Query: 184 KHYTKDFGIECRVG-RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242
++ D VG R+ N+YGP +K + + + +++ G Q R F
Sbjct: 173 LSHSNDNVQ---VGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDF 229
Query: 243 TFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-VR 301
+I++ ++ ++ K+ N+G + S NE+ I+ + +
Sbjct: 230 VYIEDVIQANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLGDFKVTYIKNPYAFFQK 289
Query: 302 GRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQG 344
+ L + P L+ G++ I + ++ +G
Sbjct: 290 HTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAIFKGQRAKG 332
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 4e-48
Identities = 49/316 (15%), Positives = 114/316 (36%), Gaps = 18/316 (5%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHY--IIASDWKK-NEHMTEDMFCHEFHLVDLRVMDNC 84
+I + GA G I + + ++L+ +IASD +K N + + +D +++
Sbjct: 4 KILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQIEHL 63
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144
++ + ++ +AA + + N + N F++L ++ +K+ F+ SS
Sbjct: 64 VE-VHKITDIYLMAALLSATA--EKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIA 120
Query: 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
++ T EP YG+ K A E C++Y +G++ R R+ +
Sbjct: 121 VF----GPTTPKENTPQYT-IMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLIS 175
Query: 205 PFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----- 259
G A + K+E + ++D+ ++ + + K+
Sbjct: 176 WSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIK 235
Query: 260 FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE--GVRGRNSDNTLIKEKLGWA 317
N+ + EI + + + + D++ +E W
Sbjct: 236 IHSSYNLAAMSFTPTEIANEIKKHIPEFTITYEPDFRQKIADSWPASIDDSQAREDWDWK 295
Query: 318 PSMKLKDGLRITYFWI 333
+ L+ + +
Sbjct: 296 HTFDLESMTKDMIEHL 311
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 158 bits (403), Expect = 9e-46
Identities = 53/322 (16%), Positives = 103/322 (31%), Gaps = 41/322 (12%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIA----SDWKKNEHMTEDMFCHEFHLVDLRVMDN 83
++ +TG G I SHIA L G ++ + ++ F +
Sbjct: 23 KVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNL--TFVEGSIADHAL 80
Query: 84 CLKVTKGV--DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
++ + D V + AA ++ N + N+++A++ + V RF Y
Sbjct: 81 VNQLIGDLQPDAVVHTAASYKDPDDWYNDTLT----NCVGGSNVVQAAKKNNVGRFVYFQ 136
Query: 142 SACIY---PEFKQLETNVSLKESDAWPAEPQDA-YGLEKLASEELCKHYTKDFGIECRVG 197
+A Y P ++ P P ++ Y + K A+E Y + G++
Sbjct: 137 TALCYGVKPI------QQPVRLDH--PRNPANSSYAISKSANE----DYLEYSGLDFVTF 184
Query: 198 RFHNIYGPFGTWKGMEKAPAA-FCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 256
R N+ GP P F ++ F R F F+ + +R
Sbjct: 185 RLANVVGPRN-----VSGPLPIFFQRLSEGKKCF----VTKARRDFVFVKDLARATVRAV 235
Query: 257 KSDFREPVNIGSDEMVSMNEMAEIVLSF--EDKKLPIHHIPGPEG-VRGRNSDNTLIKEK 313
+ S V++ E+ + V+ D + +
Sbjct: 236 DGVGHGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGPDDAPSILLDPSRTIQD 295
Query: 314 LGWAPSMKLKDGLRITYFWIKE 335
G LK+ + + +E
Sbjct: 296 FGKIEFTPLKETVAAAVAYFRE 317
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345 | Back alignment and structure |
|---|
Score = 154 bits (390), Expect = 9e-44
Identities = 62/356 (17%), Positives = 121/356 (33%), Gaps = 55/356 (15%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHY-IIASD-WKKN-EHMTEDMFCHEFHLVDLRVMDN 83
+R+ + G GFI +H+ RL E HY + D FH V+ + +
Sbjct: 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH---PHFHFVEGDISIH 57
Query: 84 CLKV---TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYA 140
+ K D V L A + N + + + ++ KR +
Sbjct: 58 SEWIEYHVKKCDVVLPLVA-IATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFP 115
Query: 141 SSACIY---PEFKQLETNVSLKESDAWPA------EPQDAYGLEKLASEELCKHYTKDFG 191
S++ +Y + E + +P+ Y + K + + Y + G
Sbjct: 116 STSEVYGMCSDKYFDEDH--------SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG 167
Query: 192 IECRVGRFHNIYGPFGTWKGMEKAP-----AAFCRKALTSTDKFEMWGDGLQTRSFTFID 246
++ + R N GP + + + ++ G Q R FT I
Sbjct: 168 LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSP-IKLIDGGKQKRCFTDIR 226
Query: 247 ECVEGVLRLTKSDFR----EPVNIGS-DEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVR 301
+ +E + R+ ++ E +NIG+ + S+ E+ E++L+ +K HH P G R
Sbjct: 227 DGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFR 286
Query: 302 G----------------RNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 341
R L W P + +++ + T + ++
Sbjct: 287 VVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDLTD 342
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 149 bits (377), Expect = 9e-43
Identities = 50/228 (21%), Positives = 76/228 (33%), Gaps = 32/228 (14%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
R+ VTGA G + S I L + H + SD E DL +
Sbjct: 4 RLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAH---EEIVACDLADAQAVHDL 60
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMY--NNTMISFNMLEASRISGVKRFFYASSACI 145
K D + +L + N + ++N+ EA+R G R +ASS
Sbjct: 61 VKDCDGIIHLGG-------VSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHT 113
Query: 146 Y---PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNI 202
P +++T V P P YGL K E+L Y F IE R +
Sbjct: 114 IGYYPRTTRIDTEV--------PRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSC 165
Query: 203 YGP------FGTWKGMEKAPAAFCRKALTSTDKFE--MWGDGLQTRSF 242
+ TW ++A + ++G T S+
Sbjct: 166 FPKPKDARMMATW-LSVDDFMRLMKRAFVAPKLGCTVVYGASANTESW 212
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 1e-42
Identities = 51/357 (14%), Positives = 117/357 (32%), Gaps = 54/357 (15%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKN-EHMTEDMFCHEFHLVDLRVM 81
+ ++ + G GFI H+++R+ + + + + H + +
Sbjct: 23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKH---ERMHFFEGDIT 79
Query: 82 DNCLKV---TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138
N V K D + L A + + + + ++ ++ G K
Sbjct: 80 INKEWVEYHVKKCDVILPLVA-IATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLV 137
Query: 139 YASSACIY-----PEFK-QLETNVSLKESDAW-PAEPQDA-YGLEKLASEELCKHYTKDF 190
+ S++ +Y +F + + P Y K + + Y +
Sbjct: 138 FPSTSEVYGMCADEQFDPD-------ASALTYGPINKPRWIYACSKQLMDRVIWGYGME- 189
Query: 191 GIECRVGRFHNIYGP-----FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245
G+ + R N GP + +G + F + + + G Q R+FT++
Sbjct: 190 GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEN-ISLVDGGSQKRAFTYV 248
Query: 246 DECVEGVLRLTKSDFR----EPVNIGS-DEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGV 300
D+ + ++++ ++ + NIG+ + S+ E+A +L + +
Sbjct: 249 DDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKL 308
Query: 301 RG----------------RNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 341
R ++LGWAP D LR + + + +
Sbjct: 309 VETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGHVADAR 365
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 2e-41
Identities = 43/222 (19%), Positives = 74/222 (33%), Gaps = 20/222 (9%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
R+ VTGA G + + RL + +D + + E DL + +
Sbjct: 5 RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPN---EECVQCDLADANAVNAM 61
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147
G D + +L ++ I+ N + +N+ EA+R G R +ASS
Sbjct: 62 VAGCDGIVHLGGIS-----VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIG 116
Query: 148 EFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFG 207
+ Q E PA P YG+ K E L + Y FG E + R +
Sbjct: 117 YYPQTER-----LGPDVPARPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEPN 171
Query: 208 TWKGMEKA-----PAAFCRKALTSTDK-FEM-WGDGLQTRSF 242
++ + + + + WG +
Sbjct: 172 NYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASANDAGW 213
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 1e-37
Identities = 75/337 (22%), Positives = 124/337 (36%), Gaps = 54/337 (16%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD-----WKKNEHMTEDMFCHEFHLVDLRVMD 82
R+ VTG GFI SHI L + G + D ++N F VDLR +
Sbjct: 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVP-----KGVPFFRVDLRDKE 56
Query: 83 NCLKVTKG--VDHVFNLAADMGGMGFIQSNHSV---IMY--NNTMISFNMLEASRISGVK 135
+ + HV + AA SV ++ N + N+LEA R GV+
Sbjct: 57 GVERAFREFRPTHVSHQAA------QASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVE 110
Query: 136 RFFYASSAC-IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
+ +AS+ IY E + +E+ P P+ Y K A E Y + +G++
Sbjct: 111 KLVFASTGGAIYGE---VPEGERAEETW--PPRPKSPYAASKAAFEHYLSVYGQSYGLKW 165
Query: 195 RVGRFHNIYGPFGTWKGMEKAPAA-----FCRKALT-------STDKFEMWGDGLQTRSF 242
R+ N+YGP + A F + L + GD R +
Sbjct: 166 VSLRYGNVYGP-----RQDPHGEAGVVAIFAERVLKGLPVTLYARKTP---GDEGCVRDY 217
Query: 243 TFIDECVEG-VLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-V 300
++ + E L L + N+G+ E + E+ V K + P G +
Sbjct: 218 VYVGDVAEAHALALFSLE--GIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDL 275
Query: 301 RGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQI 337
+ GW P + ++G+R+T + +
Sbjct: 276 ERSVLSPLKLMA-HGWRPKVGFQEGIRLTVDHFRGAV 311
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* Length = 321 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 6e-37
Identities = 80/351 (22%), Positives = 144/351 (41%), Gaps = 66/351 (18%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHMTEDMFCHEFHLVDLRVMDN 83
K R+ + G G + S I R+L+ G ++ E +L+D R + +
Sbjct: 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD------------ELNLLDSRAVHD 49
Query: 84 CLKVTKGVDHVFNLAADMGGMGFIQSNHSV---IMYNNTMISFNMLEASRISGVKRFFYA 140
+ +D V+ AA +GG I +N++ +Y N MI N++ A+ + V + +
Sbjct: 50 FFASER-IDQVYLAAAKVGG---IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFL 105
Query: 141 SSACIYPEF-KQLETNVSLKESD--AWPAEP-QDAYGLEKLASEELCKHYTKDFGIECRV 196
S+CIYP+ KQ + ES+ EP + Y + K+A +LC+ Y + +G + R
Sbjct: 106 GSSCIYPKLAKQ-----PMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRS 160
Query: 197 GRFHNIYGP---FGTWKGMEKAPAAFCRKA----LTSTDKFEMWGDGLQTRSFTFIDECV 249
N+YGP F A R+ +WG G R F +D+
Sbjct: 161 VMPTNLYGPHDNFHPSNS--HVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMA 218
Query: 250 EGVLRLTKSDFR----------EPVNIGSDEMVSMNEMAEIV---------LSFEDKKLP 290
+ + + +N+G+ ++ E+A+ + + F+ K
Sbjct: 219 AASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK-- 276
Query: 291 IHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 341
P+G + D T + +LGW + L+ GL TY W E ++ +
Sbjct: 277 ------PDGTPRKLLDVTRLH-QLGWYHEISLEAGLASTYQWFLENQDRFR 320
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 7e-35
Identities = 46/308 (14%), Positives = 94/308 (30%), Gaps = 58/308 (18%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
I +TGA GF+ ++ L S + I F + +
Sbjct: 2 NIVITGAKGFVGKNLKADLTSTTDHHI------------------FEVHRQTKEEELESA 43
Query: 88 TKGVDHVFNLAADMGGMGFIQS--NHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
D + +LA + + N ++L+ + K SS+
Sbjct: 44 LLKADFIVHLAG-------VNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQ 96
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
+ YG KL E+L + Y +++G + R+ N++G
Sbjct: 97 A--------------------TQDNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGK 136
Query: 206 FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR---E 262
+ A FC K ++ D + ++D+ V + R +
Sbjct: 137 WCK-PNYNSVIATFCYKIA--RNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENG 193
Query: 263 PVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKL 322
+ + V++ E+ +++ F+ +L + L L + PS
Sbjct: 194 VPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLF-----EKDLYSTYLSYLPSTDF 248
Query: 323 KDGLRITY 330
L +
Sbjct: 249 SYPLLMNV 256
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 1e-33
Identities = 51/328 (15%), Positives = 101/328 (30%), Gaps = 37/328 (11%)
Query: 28 RISVTGAGGFIASHIARRLKSEG-------HYIIASDWKKNEHMTEDMFCHEFHLVDLRV 80
I++ GA G + + +RL +G D + E + DL
Sbjct: 16 HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSA 75
Query: 81 MDNCLKVTK-GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK---- 135
K+ + D +F+LAA + G + + N + + +A RI+ K
Sbjct: 76 PGEAEKLVEARPDVIFHLAAIVSGEA--ELDFDKGYRINLDGTRYLFDAIRIANGKDGYK 133
Query: 136 -RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
R + SS ++ + D + P +YG +K E L Y++ +
Sbjct: 134 PRVVFTSSIAVFGA------PLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDG 187
Query: 195 RVGRFHNIYGPFGTWKGMEKA-PAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVL 253
R I G + R+ L + + V ++
Sbjct: 188 IGIRLPTICIRPGKPNAAASGFFSNILREPL-VGQEAVLPVPESIRHWHASPRSAVGFLI 246
Query: 254 RLTKSD-----FREPVNIGSDEMVSMNEMAEIVLSF--EDKKLPIHHIPGPEGVRGRNS- 305
D R +++ ++ E E + E I P +R
Sbjct: 247 HGAMIDVEKVGPRRNLSMPGLS-ATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGW 305
Query: 306 ----DNTLIKEKLGWAPSMKLKDGLRIT 329
+ +E LG+ ++ +++
Sbjct: 306 APGFEAKRARE-LGFTAESSFEEIIQVH 332
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 1e-30
Identities = 60/328 (18%), Positives = 106/328 (32%), Gaps = 52/328 (15%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD-----WKKNEHMTEDMFCHEFHLVDLRVMD 82
RI +TG G + S++ +GH I+ D ++ + E + D +++
Sbjct: 22 RILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLE 81
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMY--NNTMISFNMLEASRISGVKRFFYA 140
K HV + AA + N S N+ +A+ +GVKR
Sbjct: 82 RAFDSFK-PTHVVHSAA------AYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNF 134
Query: 141 SSACIY--PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGR 198
+A Y P V + P P +YG+ K A E + + R
Sbjct: 135 QTALCYGRPA------TVPIPIDS--PTAPFTSYGISKTAGE----AFLMMSDVPVVSLR 182
Query: 199 FHNIYGPFGTWKGMEKAPAA-FCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG-VLRLT 256
N+ GP P F ++ F R F + + + L L
Sbjct: 183 LANVTGPRL-----AIGPIPTFYKRLKAGQKCF---CSD-TVRDFLDMSDFLAIADLSLQ 233
Query: 257 KSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNS--------DNT 308
+ N+ + E S+ E+ ++V + P V + D +
Sbjct: 234 EGRPTGVFNVSTGEGHSIKEVFDVV-----LDYVGATLAEPVPVVAPGADDVPSVVLDPS 288
Query: 309 LIKEKLGWAPSMKLKDGLRITYFWIKEQ 336
+ + GW + KD + W +
Sbjct: 289 KTETEFGWKAKVDFKDTITGQLAWYDKY 316
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 3e-30
Identities = 49/349 (14%), Positives = 103/349 (29%), Gaps = 56/349 (16%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIA-----SDWKKNEHMTEDMFCHEFHLVD 77
P ++ +V GA G + H AR +++ GH ++ S ++ ++ E + +
Sbjct: 10 PGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEP-----ECRVAE 64
Query: 78 LRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRF 137
+ + +G+D V A + + + A + V R
Sbjct: 65 MLDHAGLERALRGLDGVIFSAGYYPSRP---RRWQEEVASALGQTNPFYAACLQARVPRI 121
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQ--DAYGLEKLASEELCKHYTKDFGIECR 195
Y SA P Q + E + + P +Y L K A +E + ++ G+
Sbjct: 122 LYVGSAYAMPRHPQ---GLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARN-GLPVV 177
Query: 196 VGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255
+G + G + + G R+ E G+L
Sbjct: 178 IGIPGMVLGE-LDIGPT---TGRVITAIGNG--EMTHYVAG--QRNVIDAAEAGRGLLMA 229
Query: 256 TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG------------------- 296
+ + + + M ++ + + P +
Sbjct: 230 LERGRIGERYLLTGHNLEMADLTRRIAELLGQPAPQP-MSMAMARALATLGRLRYRVSGQ 288
Query: 297 -----PEGVR--GRNS--DNTLIKEKLGWAPSMKLKDGLRITYFWIKEQ 336
+ D +E+LG+ + L D L W ++
Sbjct: 289 LPLLDETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFRDN 337
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 3e-25
Identities = 62/386 (16%), Positives = 117/386 (30%), Gaps = 85/386 (22%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD----------------------------WK 59
R+ V G G+ A L + + + D WK
Sbjct: 13 RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 72
Query: 60 KNEHMTEDMFCHEFHLVDLR---VMDNCLKVTKGVDHVFNLAAD-------MGGMGFIQS 109
+ E ++ D+ + K + D V + + + +
Sbjct: 73 ALTGKS-----IELYVGDICDFEFLAESFKSFE-PDSVVHFGEQRSAPYSMIDRSRAVYT 126
Query: 110 NHSVIMYNNTMISFNMLEASRISGVK-RFFYASSACIY--PEFKQLETNVSLKESD---- 162
H NN + + N+L A + G + + Y P E +++ +
Sbjct: 127 QH-----NNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDT 181
Query: 163 -AWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAA--- 218
+P + Y L K+ K +GI +YG M +
Sbjct: 182 LPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLD 241
Query: 219 -----------FCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV-LRLTKSDFREPVNI 266
FC +A ++G G QTR + I + V+ V + + +
Sbjct: 242 YDAVFGTALNRFCVQAAVG-HPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRV 300
Query: 267 --GSDEMVSMNEMAEI---VLSFEDKKLPIHHIPGP--EGVRGR-NSDNTLIKEKLGWAP 318
E S+NE+A + S + +P P E N+ +T + E LG P
Sbjct: 301 FNQFTEQFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLME-LGLEP 359
Query: 319 SMKLKDGLRITYFWI---KEQIEKEK 341
L + K++++ ++
Sbjct: 360 HYLSDSLLDSLLNFAVQFKDRVDTKQ 385
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 4e-19
Identities = 70/345 (20%), Positives = 125/345 (36%), Gaps = 46/345 (13%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDW------KKNEHMTEDMFCHEFHLVDLR-- 79
++ +TG GF+ S++A S+G +I D N H + EF D+R
Sbjct: 3 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 62
Query: 80 -VMDNCLKVTKGVDHVFNLAAD-------MGGMGFIQSNHSVIMYNNTMISFNMLEASRI 131
+ + D F+LA + N + N+LEA R
Sbjct: 63 NDVTRLITKYM-PDSCFHLAGQVAMTTSIDNPCMDFEIN--------VGGTLNLLEAVRQ 113
Query: 132 SGVK-RFFYASSACIY---PEFKQLETNVSLKESDAW-------PAEPQDAYGLEKLASE 180
Y+S+ +Y ++K ET D + YG K A++
Sbjct: 114 YNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAAD 173
Query: 181 ELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTD----KFEMWGDG 236
+ Y + FG+ V R ++YG + FC+KA+ + F + G+G
Sbjct: 174 QYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNG 233
Query: 237 LQTRSFTFID---ECVEGVLRLTKSDFREPVNIGSDEM--VSMNEMAEIVLSFEDKKLPI 291
Q R + L NIG + +S+ E+ +++ + + +
Sbjct: 234 KQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRF 293
Query: 292 HHIPGPEGVRGR-NSDNTLIKEKLGWAPSMKLKDGLRITYFWIKE 335
++P E + +D I + W+P + KDG++ Y W
Sbjct: 294 TNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSS 338
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 5e-19
Identities = 65/353 (18%), Positives = 126/353 (35%), Gaps = 45/353 (12%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHY-IIASDWKKN--EHMTEDMFCHEFHLVDLR 79
+ R+ + G GFI +H+ RL E HY + D + H F D+
Sbjct: 312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFH-FVEGDIS 370
Query: 80 VMDNCLK-VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138
+ ++ K D V L A + + N + + + ++ KR
Sbjct: 371 IHSEWIEYHVKKCDVVLPLVAIATPIEYT-RNPLRVFELDFEENLRIIRYCVKYR-KRII 428
Query: 139 YASSA-----CIYPEFKQLETNVSLKESDAWPAEPQD-AYGLEKLASEELCKHYTKDFGI 192
+ S++ C F + +N+ + P Y + K + + Y + G+
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVG-----PVNKPRWIYSVSKQLLDRVIWAYGEKEGL 483
Query: 193 ECRVGRFHNIYGP-----FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247
+ + R N GP G +A + + ++ G Q R FT I +
Sbjct: 484 QFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSP-IKLIDGGKQKRCFTDIRD 542
Query: 248 CVEGVLRLTKSDFR----EPVNIGS-DEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRG 302
+E + R+ ++ E +NIG+ + S+ E+ E++L+ +K HH P G R
Sbjct: 543 GIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRV 602
Query: 303 RNSDN----------------TLIKEKLGWAPSMKLKDGLRITYFWIKEQIEK 339
S + L W P + +++ + T + ++
Sbjct: 603 VESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDL 655
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 4e-14
Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 19/184 (10%)
Query: 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIAS--DWKKNEHMTEDMFCHEFHLVDLRVM 81
+ +I + GA GF+ S + + G + A +K + E + + D+ +
Sbjct: 2 EKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHL---KVKKADVSSL 58
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
D +V KG D V + +N + + +++ + +GV RF
Sbjct: 59 DEVCEVCKGADAVISAF------NPGWNNPDIYDETIKVYL-TIIDGVKKAGVNRFLMVG 111
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
A + + L +S P K E K+ I+
Sbjct: 112 GAGSLF----IAPGLRLMDSGEVPENI---LPGVKALGEFYLNFLMKEKEIDWVFFSPAA 164
Query: 202 IYGP 205
P
Sbjct: 165 DMRP 168
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 67.8 bits (165), Expect = 9e-13
Identities = 38/308 (12%), Positives = 84/308 (27%), Gaps = 24/308 (7%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWK------KNEHMTEDMFCHEFHLVDLRVMDNC 84
+ G G I + +A L WK + + + D+ D+
Sbjct: 6 IVGVTGIIGNSLAEILPLADTP--GGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDS 63
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASR--ISGVKRFFYASS 142
+ V ++ +S N+ + N+L+A +K +
Sbjct: 64 QAKLSPLTDVTHVFYVTWAN---RSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTG 120
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYG-LEKLASEELCKHYTKDFGIECRVGRFHN 201
Y + + + P+ Y + + + K G+ V R N
Sbjct: 121 RKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGN 180
Query: 202 IYGP----FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
I+G G AA C+ + D E +
Sbjct: 181 IFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAV 240
Query: 258 SDFR--EPVNIGSDEMVSMNEMAEIVLSFEDKKL----PIHHIPGPEGVRGRNSDNTLIK 311
+ E N+ + ++ +++ + + + ++G+ I
Sbjct: 241 DPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIV 300
Query: 312 EKLGWAPS 319
+ G P+
Sbjct: 301 RENGLTPT 308
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 4e-12
Identities = 46/309 (14%), Positives = 97/309 (31%), Gaps = 51/309 (16%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
+I + G G + +ARRL ++GH + +++ + + D+ D +
Sbjct: 5 KILIAGCG-DLGLELARRLTAQGHEVTGL--RRSAQPMPAGV--QTLIADVTRPDTLASI 59
Query: 88 TKGVDH--VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
V+ +AA + ++ + N L A + ++ F+ SS +
Sbjct: 60 VHLRPEILVYCVAASEYSDEHYRLSYVEGLR-------NTLSALEGAPLQHVFFVSSTGV 112
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
Y + + + E P +D G L +E L + RF IYGP
Sbjct: 113 YGQEVEEWLD----EDT--PPIAKDFSGKRMLEAEALLA------AYSSTILRFSGIYGP 160
Query: 206 FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREP-- 263
G + + +A E W + D+ + L +
Sbjct: 161 -GRLRMIRQAQTP------------EQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPE 207
Query: 264 --VNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWA---P 318
+ ++ + ++++ + + P P + N + G+ P
Sbjct: 208 RLYIVTDNQPLPVHDLLRWLADRQGIAYP--AGATPPVQGNKKLSNARLLA-SGYQLIYP 264
Query: 319 SMKLKDGLR 327
G
Sbjct: 265 D--YVSGYG 271
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 63.0 bits (153), Expect = 2e-11
Identities = 40/286 (13%), Positives = 80/286 (27%), Gaps = 45/286 (15%)
Query: 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIA-------SDWKKNEHMTEDMFCH-EFHL 75
+K R+ + G G+I I S GH S+ K + + +
Sbjct: 2 DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE 61
Query: 76 VDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135
L + K VD V + A I ++EA + +G
Sbjct: 62 ASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQL------------KLVEAIKEAGNI 109
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
+ F S + P + +P ++K + + +
Sbjct: 110 KRFLPSEFGMDP------------DIMEHALQPGSITFIDKRKVRRAIEAASIPYTY-VS 156
Query: 196 VGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR- 254
F + P DK ++GDG + D+ ++
Sbjct: 157 SNMFAGYFAGSLAQLDGHMMPPR---------DKVLIYGDGNVKGIWVDEDDVGTYTIKS 207
Query: 255 -LTKSDFREPVNI-GSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE 298
+ + I ++S E+ +I ++ L +I +
Sbjct: 208 IDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQD 253
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321 | Back alignment and structure |
|---|
Score = 61.4 bits (150), Expect = 7e-11
Identities = 60/316 (18%), Positives = 113/316 (35%), Gaps = 45/316 (14%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKG 90
+TG GF+ ++A L + + + NE ++ ++D + + + K
Sbjct: 17 ITGVAGFVGKYLANHLTEQN-VEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKP 75
Query: 91 VDHVFNLAADMGGMGFIQSNHSV-------IMYNNTMISFNMLEASRISGVK-RFFYASS 142
D++F+LAA +S+ N + ++L+A R S + R S
Sbjct: 76 -DYIFHLAA--------KSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGS 126
Query: 143 ACIY-----PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
+ Y E E N P YG+ K + L + Y K +G++
Sbjct: 127 SEEYGMILPEESPVSEEN---------QLRPMSPYGVSKASVGMLARQYVKAYGMDIIHT 177
Query: 198 RFHNIYGP-----FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG- 251
R N GP F T + + + G+ R FT + + V+
Sbjct: 178 RTFNHIGPGQSLGFVT----QDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAY 233
Query: 252 VLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG---PEGVRGRNSDNT 308
L + N+ S + ++ +++L+ + K+ P P V N
Sbjct: 234 WLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNK 293
Query: 309 LIKEKLGWAPSMKLKD 324
+K+ GW P + L+
Sbjct: 294 RLKDSTGWKPRIPLEK 309
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 2e-10
Identities = 61/356 (17%), Positives = 110/356 (30%), Gaps = 67/356 (18%)
Query: 28 RISVTGAGGFIASHIARRLKSEGH----YIIASDWKKN----EHMTEDMFCHEFHLVDLR 79
R+ VTG GF ++ L++ G Y + + + + + M + D
Sbjct: 11 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQN 70
Query: 80 VMDNCLKVTKGVDHVFNLAADMGGMGFIQS--NHSVI-----MYNNTMISFNMLEASR-I 131
+ ++ + + VF++AA Q S N M + +LEA R +
Sbjct: 71 KLLESIREFQ-PEIVFHMAA--------QPLVRLSYSEPVETYSTNVMGTVYLLEAIRHV 121
Query: 132 SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELC-------- 183
GVK +S Y E +E++ D Y K +E +
Sbjct: 122 GGVKAVVNITSDKCY---DNKEWIWGYRENE--AMGGYDPYSNSKGCAELVTSSYRNSFF 176
Query: 184 -KHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242
G R N+ G G W +A + + + R +
Sbjct: 177 NPANYGQHGTAVATVRAGNVIGG-GDWA--LDRIVPDILRAFEQSQPVII-RNPHAIRPW 232
Query: 243 TFIDECVEGVLRLT------KSDFREPVNIG--SDEMVSMNEMAEIVLSFEDKKLPIHHI 294
+ E + G L L +++ E N G + + + E ++ + +
Sbjct: 233 QHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQ-- 290
Query: 295 PGPEGVRGRNS---------DNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 341
+ G D + K +LGW P L L W K +
Sbjct: 291 -----LDGNAHPHEAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNWLSGTD 341
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330 | Back alignment and structure |
|---|
Score = 57.8 bits (141), Expect = 1e-09
Identities = 38/174 (21%), Positives = 69/174 (39%), Gaps = 25/174 (14%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLR---VMDNCL 85
I + G G+I SH ++L EG ++ D + H +F+ DLR + +
Sbjct: 4 ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVF 63
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSV---IMY--NNTMISFNMLEASRISGVKRFFYA 140
+ ++ V + AA S+ + Y NN + +LE V +F ++
Sbjct: 64 T-QENIEAVMHFAA------DSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFS 116
Query: 141 SSACIY--PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGI 192
S+A Y + + E P + YG KLA E++ Y++ +
Sbjct: 117 STAATYGEVD------VDLITEET--MTNPTNTYGETKLAIEKMLHWYSQASNL 162
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337 | Back alignment and structure |
|---|
Score = 57.1 bits (139), Expect = 3e-09
Identities = 77/334 (23%), Positives = 126/334 (37%), Gaps = 54/334 (16%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWK-------------KNEHMTEDMFCHEFH 74
R+ VTG GFI SH R+L G Y + N + F
Sbjct: 2 RLLVTGGAGFIGSHFVRQL-LAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 75 LVDLRVMDNCLKVTKGVDHVFNLAAD-------MGGMGFIQSNHSVIMYNNTMISFNMLE 127
D+R + +GVD + + AA+ G F ++ N + +L+
Sbjct: 61 HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTET--------NVQGTQTLLQ 112
Query: 128 ASRISGVKRFFYASSACIY-----PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL 182
+ +GV R + S+ +Y + E+ P EP Y K S+ +
Sbjct: 113 CAVDAGVGRVVHVSTNQVYGSIDSGSWT--ES---------SPLEPNSPYAASKAGSDLV 161
Query: 183 CKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242
+ Y + +G++ R+ R N YGP+ + EK F L ++GDG R +
Sbjct: 162 ARAYHRTYGLDVRITRCCNNYGPY---QHPEKLIPLFVTNLLDG-GTLPLYGDGANVREW 217
Query: 243 TFIDECVEGVLR-LTKSDFREPVNIGSDEMVSMNEMAEIVLSF--EDKKLPIHHIPGPEG 299
D+ G+ L E +IG ++ E+ I+L D + + +G
Sbjct: 218 VHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSS-VRKVADRKG 276
Query: 300 VRGRNS-DNTLIKEKLGWAPSMKLKDGLRITYFW 332
R S D I+ +LG+ P + DGL T W
Sbjct: 277 HDLRYSLDGGKIERELGYRPQVSFADGLARTVRW 310
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 55.7 bits (134), Expect = 6e-09
Identities = 55/318 (17%), Positives = 99/318 (31%), Gaps = 60/318 (18%)
Query: 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL 85
+ G G + A ++R L +G II + +N E + + +
Sbjct: 5 TGTLLSFGHG-YTARVLSRALAPQGWRIIGT--SRNPDQMEAI---RASGAEPLLWPGEE 58
Query: 86 KVTKGVDH-VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144
GV H + + A D GG + + A+R + + Y S+
Sbjct: 59 PSLDGVTHLLISTAPDSGGDPVLA-------------ALGDQIAARAAQFRWVGYLSTTA 105
Query: 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
+Y + + + P P A G ++ +E+ + + V R IYG
Sbjct: 106 VYGDHDGAWVD------ETTPLTPTAARGRWRVMAEQQWQ---AVPNLPLHVFRLAGIYG 156
Query: 205 PFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPV 264
P + P + K Q S +++ + + V
Sbjct: 157 P-------GRGPFSKLGKGGIRRII-----KPGQVFSRIHVEDIAQVLAASMARPDPGAV 204
Query: 265 -NIGSDEMVSMNE----MAEI-------VLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKE 312
N+ DE V + AE+ + F+ L + N IKE
Sbjct: 205 YNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSE--NKRVRNDRIKE 262
Query: 313 KLGWA---PSMKLKDGLR 327
+LG P+ + GL
Sbjct: 263 ELGVRLKYPN--YRVGLE 278
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 6e-09
Identities = 40/182 (21%), Positives = 66/182 (36%), Gaps = 33/182 (18%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIA-----SDWKKNEHMTEDMFCHEFHLV- 76
P K V G GF+AS + + L +G+ + + KK H+ E + +
Sbjct: 6 PIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFR 65
Query: 77 -DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMIS------FNMLEA- 128
DL + G D VF++A + + + N MI N+++A
Sbjct: 66 ADLTDELSFEAPIAGCDFVFHVATPV--------HFASEDPENDMIKPAIQGVVNVMKAC 117
Query: 129 SRISGVKRFFYASS-ACIYPEFKQLETNVSLKESDAW--------PAEPQDAYGLEKLAS 179
+R VKR SS A + T + + E + W P Y K +
Sbjct: 118 TRAKSVKRVILTSSAAAVTINQLD-GTGLVVDEKN-WTDIEFLTSAKPPTWGYPASKTLA 175
Query: 180 EE 181
E+
Sbjct: 176 EK 177
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 54.3 bits (130), Expect = 9e-09
Identities = 23/181 (12%), Positives = 46/181 (25%), Gaps = 21/181 (11%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIA---SDWKKNEHMTEDMFCHEFHLVDLRVMDNC 84
+I+V GA G S I + GH ++A K + + + +
Sbjct: 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGA-----TVATLVKEPLVLT 56
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144
VD V + + G G + +++ R S F SA
Sbjct: 57 EADLDSVDAVVDALSVPWGSGRGYLHLDFAT--------HLVSLLRNSDTLAVFILGSAS 108
Query: 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
+ + D + + L + + + +
Sbjct: 109 LA-----MPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFP 163
Query: 205 P 205
Sbjct: 164 S 164
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 54.2 bits (130), Expect = 9e-09
Identities = 25/180 (13%), Positives = 45/180 (25%), Gaps = 22/180 (12%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIA--SDWKKNEHMTEDMFCHEFHLVDLRVMDNCL 85
+I + GA G S I K+ GH + A + K +D +++ + D L
Sbjct: 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKD-----INILQKDIFDLTL 56
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
+ V + +++ + R A
Sbjct: 57 SDLSDQNVVVDAYGISPDEAEKHVTSLD----------HLISVLNGTVSPRLLVVGGAAS 106
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
E +L ES P + E K ++ P
Sbjct: 107 LQID---EDGNTLLESKGLREAPYYPTARAQAKQLEHLKS--HQAEFSWTYISPSAMFEP 161
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 1e-08
Identities = 20/137 (14%), Positives = 44/137 (32%), Gaps = 19/137 (13%)
Query: 24 SEKLRISVTGAGGFIASHIARRLKSEGHYI----IASDWKKNEHMTEDMFCHEFHLVDLR 79
+ + VTGA G + ++LK + + E + + + + D+
Sbjct: 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEA---DVFIGDIT 58
Query: 80 VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISF------------NMLE 127
D+ +G+D + L + + M N ++
Sbjct: 59 DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQID 118
Query: 128 ASRISGVKRFFYASSAC 144
A++++GVK S
Sbjct: 119 AAKVAGVKHIVVVGSMG 135
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 2e-08
Identities = 42/283 (14%), Positives = 81/283 (28%), Gaps = 52/283 (18%)
Query: 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIA----SDWKKNEHMTEDMFCHEFHLVDLR 79
K +I + G G+I +H+ + GH + K +L
Sbjct: 9 GMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELD 68
Query: 80 VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRFF 138
+ +++ K VD V S + + + F +LEA +++G +KRF
Sbjct: 69 EHEKLVELMKKVDVVI----------------SALAFPQILDQFKILEAIKVAGNIKRFL 112
Query: 139 YASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGR 198
+ L P +A K + +
Sbjct: 113 PSDFGVEEDRINAL--------------PPFEALIERKRMIRRAIEEANIPYTYVS-ANC 157
Query: 199 FHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT---FIDECVEGVLRL 255
F + + + K D+ ++G G + I V
Sbjct: 158 FASYFINYLLRPYDPK-------------DEITVYGTGEAKFAMNYEQDIGLYTIKVATD 204
Query: 256 TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE 298
++ R + S +++ E+ KK H+P E
Sbjct: 205 PRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEE 247
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 2e-08
Identities = 24/159 (15%), Positives = 55/159 (34%), Gaps = 30/159 (18%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIA-----SDWKKNEHMTEDMFCHEFHLVDLRVMD 82
+I + G+ G + + + L + + I A + ++ F VD +
Sbjct: 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHF-----DVDWTP-E 55
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
K G+D + N++ GG ++ + + +++A+ + VKRF S+
Sbjct: 56 EMAKQLHGMDAIINVSG-SGGKSLLK-----VDLYGAV---KLMQAAEKAEVKRFILLST 106
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEE 181
K + + Y + K ++
Sbjct: 107 IFSLQPEKWI----------GAGFDALKDYYIAKHFADL 135
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 3e-08
Identities = 44/290 (15%), Positives = 82/290 (28%), Gaps = 58/290 (20%)
Query: 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIA--------SDWKKNEHMTEDMFCH-EFH 74
+ RI + GA G+I H+A+ GH S+ +K + +
Sbjct: 2 GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 61
Query: 75 LVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV 134
+ + ++ K VD V S + N+++A + G
Sbjct: 62 HGSIDDHASLVEAVKNVDVVI----------------STVGSLQIESQVNIIKAIKEVGT 105
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
+ F+ S + + EP + K + GI
Sbjct: 106 VKRFFPSEFGNDVD-------------NVHAVEPAKSVFEVKAKVRR----AIEAEGIPY 148
Query: 195 ---RVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFID---EC 248
F + G+ P DK + GDG F +
Sbjct: 149 TYVSSNCFAGYFLRSLAQAGLTAPP----------RDKVVILGDGNARVVFVKEEDIGTF 198
Query: 249 VEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE 298
+ ++ + +S+NE+ + DK L ++P E
Sbjct: 199 TIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEE 248
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 3e-08
Identities = 35/158 (22%), Positives = 58/158 (36%), Gaps = 30/158 (18%)
Query: 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIA-----SDWKKNEHMTEDMFCHEFHLV-- 76
E + VTGA GF+ASH+ +L G+ + S + + + F
Sbjct: 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVV 68
Query: 77 -DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI------SFNMLEA- 128
D+ +V KG V ++A+ + S + ++ + N L A
Sbjct: 69 EDMLKQGAYDEVIKGAAGVAHIASVV----------SFSNKYDEVVTPAIGGTLNALRAA 118
Query: 129 SRISGVKRFFYASS--ACIYPEFKQLETNVSLKESDAW 164
+ VKRF SS + + P K + L E W
Sbjct: 119 AATPSVKRFVLTSSTVSALIP--KPNVEGIYLDEKS-W 153
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 6e-08
Identities = 42/190 (22%), Positives = 73/190 (38%), Gaps = 28/190 (14%)
Query: 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIA-----SDWKKNEHMTE-DMFCHEFHLV- 76
S+ + VTGA GFI S + RL G+ + A ++ KK +H+ + L
Sbjct: 3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWK 62
Query: 77 -DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMIS------FNMLEAS 129
DL + + KG VF++A M + N +I ++++
Sbjct: 63 ADLADEGSFDEAIKGCTGVFHVATPM--------DFESKDPENEVIKPTIEGMLGIMKSC 114
Query: 130 RISG-VKRFFYASS-ACIYPEFKQL----ETNVSLKESDAWPAEPQDAYGLEKLASEELC 183
+ V+R + SS + + QL E+ S E Y + K +E+
Sbjct: 115 AAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAA 174
Query: 184 KHYTKDFGIE 193
Y K+ I+
Sbjct: 175 WKYAKENNID 184
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 7e-08
Identities = 37/177 (20%), Positives = 64/177 (36%), Gaps = 29/177 (16%)
Query: 26 KLRISVTGAGGFIASHIARRLKSEGHYIIAS------DWKKNEHMTEDMFCHE-FHLV-- 76
K R+ VTG GF+ S I + L G+ + + + +T E H
Sbjct: 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNA 60
Query: 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMIS------FNMLEASR 130
DL D+ +G +F+ A+ + + +V + +L+A
Sbjct: 61 DLSNPDSFAAAIEGCVGIFHTASPI--------DFAVSEPEEIVTKRTVDGALGILKACV 112
Query: 131 ISG-VKRFFYASS-ACIYPEFKQL----ETNVSLKESDAWPAEPQDAYGLEKLASEE 181
S VKRF Y SS + + K E++ S + Y + K +E+
Sbjct: 113 NSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEK 169
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 9e-08
Identities = 37/202 (18%), Positives = 70/202 (34%), Gaps = 43/202 (21%)
Query: 26 KLRISVTGAGGFIASHIARRLKSE-GHYIIASD------------------WKKNEHMTE 66
+R+ V G G+I SH R L + H ++ D +K +
Sbjct: 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDG 61
Query: 67 DMFCH-----EFHLVDLR---VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSV---IM 115
+ D+R ++ +D V ++ A F+ SV +
Sbjct: 62 PKPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCA------FLAVGESVRDPLK 115
Query: 116 Y--NNTMISFNMLEASRISGVKRFFYASSACIY---PEFKQLETNVSLKESDAWPAEPQD 170
Y NN + +L+A + + ++SSA I+ + + P+
Sbjct: 116 YYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINA--KKSPES 173
Query: 171 AYGLEKLASEELCKHYTKDFGI 192
YG KL +E + + + +GI
Sbjct: 174 PYGESKLIAERMIRDCAEAYGI 195
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 1e-07
Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 12/123 (9%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLV--DLRVMDNCL 85
+I++ GA G + G+ + ++ H+V D+ +
Sbjct: 5 KIAIFGATGQTGLTTLAQAVQAGYEVTV--LVRDSSRLPSEGPRPAHVVVGDVLQAADVD 62
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
K G D V L + +M N++ A + GV + +SA +
Sbjct: 63 KTVAGQDAVIVLLGTRNDLSPTT-----VMSEGAR---NIVAAMKAHGVDKVVACTSAFL 114
Query: 146 YPE 148
+
Sbjct: 115 LWD 117
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Length = 346 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 3e-07
Identities = 73/349 (20%), Positives = 123/349 (35%), Gaps = 77/349 (22%)
Query: 24 SEKLRISVTGAGGFIASHIARRL--KSEGHYIIASDWK-------KNEHMTEDMFCHEFH 74
S + I VTG GFI S+ + E + II D N +D + F
Sbjct: 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFD-ALTYSGNLNNVKSIQDHPNYYFV 80
Query: 75 LVDLR---VMDNCLKVTKGVDHVFNLAAD-------MGGMGFIQSNHSVIMYNNTMISFN 124
+++ ++++ +K V + N AA+ + F + N + +
Sbjct: 81 KGEIQNGELLEHVIKERD-VQVIVNFAAESHVDRSIENPIPFYDT--------NVIGTVT 131
Query: 125 MLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASE 180
+LE + + S+ +Y SL ++ + P P Y K +++
Sbjct: 132 LLELVKKYPHIKLVQVSTDEVYG---------SLGKTGRFTEETPLAPNSPYSSSKASAD 182
Query: 181 ELCKHYTKDFGIECRVGRFHNIYGP--FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238
+ Y K + + V R N YGP + EK AL K ++GDGL
Sbjct: 183 MIALAYYKTYQLPVIVTRCSNNYGPYQYP-----EKLIPLMVTNALEG-KKLPLYGDGLN 236
Query: 239 TRSFTFIDECVEGVLR-LTKSDFREPVNIGSDEMVSMNEMA--EIVLSF-----EDKKLP 290
R + + + + L K E NIG + NE E+V + KK
Sbjct: 237 VRDWLHVTDHCSAIDVVLHKGRVGEVYNIGGN-----NEKTNVEVVEQIITLLGKTKKD- 290
Query: 291 IHHIPGPEGVRGRNS-------DNTLIKEKLGWAPSMKLKDGLRITYFW 332
I + V R + +K + W P + GL+ T W
Sbjct: 291 IEY------VTDRLGHDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQW 333
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 4e-07
Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 12/120 (10%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIA---SDWKKNEHMTEDMFCHEFHLVDLRVMDNC 84
R+ V GA G +A ++ LK++GH +A ++ + E + + + +L ++
Sbjct: 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE--LRERGASDIVVANLE--EDF 78
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144
+D V A G +I + ++ + G+KRF SS
Sbjct: 79 SHAFASIDAVVFAAGSGPHTG--ADKTILIDLWGAI---KTIQEAEKRGIKRFIMVSSVG 133
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 4e-07
Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 32/180 (17%)
Query: 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASD---------WKKNEHMTEDMFCHEFH 74
S + VTG G+I SH L G+ + +D + E +T+ F+
Sbjct: 9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHI--PFY 66
Query: 75 LVDLR---VMDNCLKVTKGVDHVFNLAA--DMGGMGFIQSNHSV---IMY--NNTMISFN 124
VDL ++ K K +D V + A +G S + Y NN + +
Sbjct: 67 EVDLCDRKGLEKVFKEYK-IDSVIHFAGLKAVG--------ESTQIPLRYYHNNILGTVV 117
Query: 125 MLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184
+LE + V +F ++SSA +Y + + + + E P P + YG K A E +
Sbjct: 118 LLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEEC--PLGPTNPYGHTKYAIENILN 175
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 48.9 bits (116), Expect = 1e-06
Identities = 45/286 (15%), Positives = 82/286 (28%), Gaps = 54/286 (18%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTEDMFCH-----EFHL 75
PS K R+ + GA GFI +A YI+A ++ +
Sbjct: 7 PSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVY 66
Query: 76 VDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135
+ + K+ K + ++ G Q +++A + G
Sbjct: 67 GLINEQEAMEKILKEHEIDIVVSTVGGESILDQ--------------IALVKAMKAVGTI 112
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC- 194
+ F S A P EP EK +L + GI
Sbjct: 113 KRFLPSEFGHDVN-------------RADPVEPGLNMYREKRRVRQLVEES----GIPFT 155
Query: 195 --RVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV 252
+ P TD F+++GDG F + +
Sbjct: 156 YICCNSIASWPYYNNIHPSEVLPP----------TDFFQIYGDGNVKAYFVAGTDIGKFT 205
Query: 253 LRLTKSD--FREPVNI-GSDEMVSMNEMAEIVLSFEDKKLPIHHIP 295
++ + V+ S +++NE+A + + LP +
Sbjct: 206 MKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVT 251
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 48.4 bits (115), Expect = 2e-06
Identities = 39/293 (13%), Positives = 75/293 (25%), Gaps = 64/293 (21%)
Query: 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIA--------SDWKKNEHMTEDMFCH-EFH 74
S +I + G G+I + R S H S + E
Sbjct: 2 SHMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTII 61
Query: 75 LVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG- 133
++ + + V K VD V S + + +++ A + +G
Sbjct: 62 EGEMEEHEKMVSVLKQVDIVI----------------SALPFPMISSQIHIINAIKAAGN 105
Query: 134 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
+KRF + C K P P ++ +K + +
Sbjct: 106 IKRFLPSDFGCEEDRIK--------------PLPPFESVLEKKRIIRR----AIEAAALP 147
Query: 194 C---RVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE--- 247
F + + D ++G G F E
Sbjct: 148 YTYVSANCFGAYFVNYLLHPSPHPNR----------NDDIVIYGTG--ETKFVLNYEEDI 195
Query: 248 --CVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE 298
V + R + ++S NE+ + + H+P +
Sbjct: 196 AKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMPDEQ 248
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 5e-06
Identities = 78/339 (23%), Positives = 129/339 (38%), Gaps = 61/339 (17%)
Query: 25 EKLRISVTGAGGFIASHIARRL--KSEGHYIIASDWK-------KNEHMTEDMFCHEFHL 75
+++ VTG GFI S+ R + K +I D K N ED + F
Sbjct: 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINID-KLGYGSNPANLKDLEDDPRYTFVK 60
Query: 76 VDLRVMDNCLKVTKGVDHVFNLAAD-------MGGMGFIQSNHSVIMYNNTMISFNMLEA 128
D+ + ++ + VD V +LAA+ F+ S N + ++ +LE+
Sbjct: 61 GDVADYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHS--------NVIGTYTLLES 112
Query: 129 SRISGV-KRFFYASSACIY-----PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL 182
R RF + S+ +Y F E P Y K AS+ L
Sbjct: 113 IRRENPEVRFVHVSTDEVYGDILKGSFT--EN---------DRLMPSSPYSATKAASDML 161
Query: 183 CKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242
+T+ + + + R N YGP+ + EK +A K ++G G R +
Sbjct: 162 VLGWTRTYNLNASITRCTNNYGPY---QFPEKLIPKTIIRASLG-LKIPIYGTGKNVRDW 217
Query: 243 TFIDECVEGVLR-LTKSDFREPVNIGSDEMVSMNEMA--EIV-----LSFEDKKLPIHHI 294
++++ V + L K + RE NI + E E+V L + ++L I +
Sbjct: 218 LYVEDHVRAIELVLLKGESREIYNISAG-----EEKTNLEVVKIILRLMGKGEEL-IELV 271
Query: 295 PGPEGVRGRNS-DNTLIKEKLGWAPSMKLKDGLRITYFW 332
G R S D+ I L W P +G++ T W
Sbjct: 272 EDRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDW 310
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341 | Back alignment and structure |
|---|
Score = 45.9 bits (110), Expect = 9e-06
Identities = 47/185 (25%), Positives = 71/185 (38%), Gaps = 46/185 (24%)
Query: 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN------------EHMTEDMFCH 71
S K I VTG G+I SH A L + G+ ++ +D N E +T
Sbjct: 3 STKGTILVTGGAGYIGSHTAVELLAHGYDVVIAD---NLVNSKREAIARIEKITGKTP-- 57
Query: 72 EFHLVDLR---VMDNCLKVTKGVDHVFNLAA--DMGGMGFIQSNHSV---IMY--NNTMI 121
FH D+ + + + AA +G SV I Y NN
Sbjct: 58 AFHETDVSDERALARIFDAHP-ITAAIHFAALKAVG--------ESVAKPIEYYRNNLDS 108
Query: 122 SFNMLEASRISGVKRFFYASSACIY--PEFKQLETNVSLKESDAWPAEPQDAYGLEKLAS 179
++L R VKR ++SSA +Y PE + E+ P + YG KL +
Sbjct: 109 LLSLLRVMRERAVKRIVFSSSATVYGVPER------SPIDETF--PLSATNPYGQTKLMA 160
Query: 180 EELCK 184
E++ +
Sbjct: 161 EQILR 165
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 44.6 bits (105), Expect = 2e-05
Identities = 22/218 (10%), Positives = 56/218 (25%), Gaps = 42/218 (19%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLV----DLRVMDN 83
I++ GA G IA + L + I ++ + + +
Sbjct: 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGX 66
Query: 84 CLKVTKGVDHVF-NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
+ + VF M ++++A ++R S
Sbjct: 67 LEQAVTNAEVVFVGAMESGSDMA------------------SIVKALSRXNIRRVIGVSM 108
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN- 201
A + E + +Y + + + + ++ I R+ +N
Sbjct: 109 AGLSGE-------FPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTI-LRLTWLYND 160
Query: 202 -------IYGPFGTWKGMEKAP---AAFCRKALTSTDK 229
+ + + + L + D+
Sbjct: 161 PEXTDYELIPEGAQFNDAQVSREAVVKAIFDILHAADE 198
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 3e-05
Identities = 46/342 (13%), Positives = 91/342 (26%), Gaps = 87/342 (25%)
Query: 10 AYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRL---KSEGHYII----ASDWKKNE 62
A T P E + +TGA GF+ ++ L +I A +
Sbjct: 57 ADTLATAVNLPGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDAR 116
Query: 63 HMTEDMFCHEFHLVDLRVMDNCL-KVT----------------------KGVDHVFNLAA 99
E F + + ++ + VD + + AA
Sbjct: 117 RRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAA 176
Query: 100 DMGGMGFIQSNHSVIMYN-----NTMISFNMLEASRISGVKRFFYASSACIYPEFKQLET 154
+ N Y+ N + ++ + + +K F Y S+A + +E
Sbjct: 177 MV--------NA--FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGA---AIEP 223
Query: 155 NVSLKESDAWPAEPQDA--------YGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPF 206
+ +++D P YG K A E L + + V R I
Sbjct: 224 SAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADT 283
Query: 207 ---GTW-------------KGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE 250
G AP +F + + + E
Sbjct: 284 SYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHF-------DGLPVTFVAE 336
Query: 251 GVLRLTKSDFREPVNIGS--------DEMVSMNEMAEIVLSF 284
+ L + + D+ + ++E + ++
Sbjct: 337 AIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA 378
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 5e-05
Identities = 74/346 (21%), Positives = 124/346 (35%), Gaps = 71/346 (20%)
Query: 28 RISVTGAGGFIASHIARRL--KSEGHYIIASDWKK-----NEHMTEDMFCHEFHLV---- 76
I VTG GFI S+ + ++ D K N+ E + LV
Sbjct: 6 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLD--KLTYAGNKANLEAILGDRVELVVGDI 63
Query: 77 -DLRVMDNCLKVTKGVDHVFNLAAD-------MGGMGFIQSNHSVIMYNNTMISFNMLEA 128
D ++D K+ D + + AA+ FI + N + ++ +LEA
Sbjct: 64 ADAELVD---KLAAKADAIVHYAAESHNDNSLNDPSPFIHT--------NFIGTYTLLEA 112
Query: 129 SRISGVKRFFYAS------SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL 182
+R + RF + S + + K + P Y K AS+ +
Sbjct: 113 ARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLI 171
Query: 183 CKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242
K + + FG++ + N YGP+ + +EK L K +++G+G R +
Sbjct: 172 VKAWVRSFGVKATISNCSNNYGPY---QHIEKFIPRQITNILAG-IKPKLYGEGKNVRDW 227
Query: 243 TFIDECVEGVLR-LTKSDFREPVNIGSDEMVSMNEMA--EIV-----LSFEDKKLPIHHI 294
++ GV LTK E IG+D E E++ + K H
Sbjct: 228 IHTNDHSTGVWAILTKGRMGETYLIGAD-----GEKNNKEVLELILEKMGQPKDA-YDH- 280
Query: 295 PGPEGVRGRNS-------DNTLIKEKLGWAPS-MKLKDGLRITYFW 332
V R D + ++++LGW P +GL T W
Sbjct: 281 -----VTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQW 321
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 7e-05
Identities = 40/286 (13%), Positives = 76/286 (26%), Gaps = 53/286 (18%)
Query: 26 KLRISVTGAGGFIASHIARRLKSEGHYIIA----------SDWKKNEHMTEDMFCHEFHL 75
+ +I + G G I HI G+ A + K+
Sbjct: 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLE 61
Query: 76 VDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135
D+ + +K K VD V +++A + +G
Sbjct: 62 GDINDHETLVKAIKQVDIVI----------------CAAGRLLIEDQVKIIKAIKEAGNV 105
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
+ F+ S + + EP EK + + + G+
Sbjct: 106 KKFFPSEFGLDVDRHD-------------AVEPVRQVFEEKASIRRVIEAE----GVPYT 148
Query: 196 VGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255
H G F A DK + GDG ++ + +R
Sbjct: 149 YLCCHAFTGYFLRNLAQLDATDP-------PRDKVVILGDGNVKGAYVTEADVGTFTIRA 201
Query: 256 TKSD--FREPVNI-GSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE 298
+ V+I ++ NE+ + K L ++ +
Sbjct: 202 ANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSEEQ 247
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 1e-04
Identities = 19/127 (14%), Positives = 38/127 (29%), Gaps = 10/127 (7%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHY--IIASDWKKNEHMTEDMFCHEFHLVDLRVMD 82
+ + + GA G + + + +G + + +K E +VD +D
Sbjct: 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLD 76
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNN--TMISFNMLEASRISGVKRFFYA 140
+ +G D F +G + + E ++ G K F
Sbjct: 77 DYASAFQGHDVGFCC------LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLL 130
Query: 141 SSACIYP 147
SS
Sbjct: 131 SSKGADK 137
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 1e-04
Identities = 39/184 (21%), Positives = 62/184 (33%), Gaps = 41/184 (22%)
Query: 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCH-------------E 72
++ VTG G+I SH L G+ + D N E
Sbjct: 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVE 61
Query: 73 FHLVDLR---VMDNCLKVTKGVDHVFNLAA--DMGGMGFIQSNHSV---IMY--NNTMIS 122
F +D+ + K V + A +G SV + Y N +
Sbjct: 62 FEEMDILDQGALQRLFKKYS-FMAVIHFAGLKAVG--------ESVQKPLDYYRVNLTGT 112
Query: 123 FNMLEASRISGVKRFFYASSACIY--PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASE 180
+LE + GVK ++SSA +Y P++ + L E + YG K E
Sbjct: 113 IQLLEIMKAHGVKNLVFSSSATVYGNPQY------LPLDE-AHPTGGCTNPYGKSKFFIE 165
Query: 181 ELCK 184
E+ +
Sbjct: 166 EMIR 169
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 1e-04
Identities = 31/185 (16%), Positives = 55/185 (29%), Gaps = 31/185 (16%)
Query: 1 MGSTEGTYGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIAS---D 57
MGS+ + + E Y+ + + GAGG IA H+ +L +
Sbjct: 1 MGSSHHHHHHSSGRE---NLYFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQ 57
Query: 58 WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN 117
K + + D+ + +G D V+ G IQ+N
Sbjct: 58 PAKIHKPYPTNS--QIIMGDVLNHAALKQAMQGQDIVYANLT--GEDLDIQAN------- 106
Query: 118 NTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 177
+++ A + VKR + S IY E + W
Sbjct: 107 ------SVIAAMKACDVKRLIFVLSLGIYDEVP--------GKFVEWNNAVIGEPLKPFR 152
Query: 178 ASEEL 182
+ +
Sbjct: 153 RAADA 157
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338 | Back alignment and structure |
|---|
Score = 42.0 bits (100), Expect = 2e-04
Identities = 45/178 (25%), Positives = 67/178 (37%), Gaps = 39/178 (21%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKN------------EHMTEDMFCHEFHL 75
R+ VTG G+I SH +L GH +I D N E + F
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILD---NLCNSKRSVLPVIERLGGKHP--TFVE 56
Query: 76 VDLR---VMDNCLKVTKGVDHVFNLAA--DMGGMGFIQSNHSVIMY--NNTMISFNMLEA 128
D+R +M L +D V + A +G +S + Y NN + ++ A
Sbjct: 57 GDIRNEALMTEILHDHA-IDTVIHFAGLKAVG-----ESVQKPLEYYDNNVNGTLRLISA 110
Query: 129 SRISGVKRFFYASSACIY--PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184
R + VK F ++SSA +Y + E PQ YG KL E++
Sbjct: 111 MRAANVKNFIFSSSATVYGDNPK------IPYVE-SFPTGTPQSPYGKSKLMVEQILT 161
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 14/82 (17%), Positives = 31/82 (37%), Gaps = 10/82 (12%)
Query: 17 EREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLV 76
+ L +++TG+ G + + +L++ GH +I + E F
Sbjct: 138 RTSTLFDGSPLTVAITGSRGLVGRALTAQLQTGGHEVIQ--LVRKEPKPGKRFWDP---- 191
Query: 77 DLRVMDNCLKVTKGVDHVFNLA 98
++ + G D + +LA
Sbjct: 192 ----LNPASDLLDGADVLVHLA 209
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 374 | |||
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 100.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 100.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 100.0 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 100.0 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 100.0 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 100.0 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 100.0 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 100.0 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 100.0 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 100.0 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 100.0 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 100.0 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 100.0 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 100.0 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 100.0 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 100.0 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 100.0 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 100.0 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 100.0 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 100.0 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 100.0 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 100.0 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 100.0 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 100.0 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 100.0 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 100.0 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 100.0 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 100.0 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 100.0 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 100.0 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 100.0 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 100.0 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 100.0 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 100.0 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 100.0 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 100.0 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.98 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.97 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.97 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.97 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.97 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.97 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.96 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.96 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.96 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.96 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.96 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.96 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.96 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.96 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.95 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.95 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.95 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.95 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.93 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.93 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.93 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.93 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.92 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.91 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.91 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.9 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.9 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.9 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.9 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.9 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.89 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.89 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.89 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.89 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.89 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.89 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.89 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.89 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.89 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.89 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.89 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.89 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.88 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.88 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.88 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.88 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.88 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.88 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.88 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.88 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.88 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.88 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.87 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.87 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.87 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.87 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.87 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.87 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.87 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.87 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.87 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.87 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.87 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.87 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.87 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.87 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.87 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.87 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.87 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.87 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.87 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.87 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.86 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.86 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.86 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.86 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.86 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.86 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.86 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.86 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.86 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.86 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.86 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.86 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.86 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.86 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.86 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.86 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.86 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.86 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.86 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.86 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.85 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.85 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.85 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.85 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.85 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.85 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.85 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.85 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.85 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.85 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.85 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.85 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.85 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.85 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.85 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.85 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.85 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.85 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.85 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.85 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.85 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.85 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.85 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.85 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.85 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.85 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.85 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.85 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.85 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.85 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.84 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.84 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.84 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.84 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.84 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.84 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.84 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.84 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.84 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.84 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.84 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.84 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.84 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.84 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.84 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.84 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.84 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.84 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.84 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.84 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.84 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.84 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.84 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.84 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.83 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.83 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.83 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.83 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.83 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.83 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.83 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.83 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.83 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.83 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.83 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.83 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.83 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.83 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.83 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.83 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.82 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.82 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.82 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.82 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.82 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.82 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.82 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.82 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.82 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.82 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.81 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.81 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.81 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.81 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.81 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.81 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.81 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.81 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.81 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.81 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.81 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.81 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.81 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.81 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.81 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.81 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.81 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.81 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.8 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.8 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.8 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.8 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.8 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.8 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.8 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.79 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.79 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.79 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.79 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.79 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.78 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.78 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.78 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.78 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.77 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.77 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.77 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.77 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.76 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.75 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.75 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.74 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.74 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.73 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.73 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.73 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.72 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.72 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.72 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.71 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.71 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.7 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.69 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.69 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.69 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.69 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.68 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.61 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.59 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.55 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.52 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.51 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.51 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.33 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.32 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.31 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.3 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.29 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.27 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.25 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 99.21 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.2 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.19 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.16 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 99.01 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.94 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.94 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.86 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.83 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.83 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.79 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.75 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.67 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.63 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.63 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.61 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.58 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.49 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 98.48 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.43 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 98.42 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 98.41 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.41 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.4 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.34 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.33 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.26 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 98.25 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 98.22 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 98.06 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.05 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 98.01 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.98 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.97 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.94 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.87 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.86 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.86 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.83 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.78 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 97.78 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 97.76 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 97.75 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 97.72 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.7 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.7 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.65 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.61 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.6 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 97.6 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.58 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.55 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.54 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.54 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 97.52 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 97.51 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.51 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 97.5 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 97.49 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 97.47 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 97.47 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 97.47 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 97.43 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.42 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 97.42 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.4 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.39 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.38 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 97.38 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.37 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 97.36 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 97.36 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 97.35 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 97.34 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 97.33 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.31 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.31 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.31 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 97.3 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.3 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 97.29 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.27 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 97.27 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.26 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.26 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.25 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.25 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 97.25 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.24 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.24 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 97.23 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 97.23 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 97.22 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 97.22 | |
| 2d59_A | 144 | Hypothetical protein PH1109; COA binding, structur | 97.21 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.2 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 97.2 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 97.2 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.18 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 97.18 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.17 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.17 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 97.16 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 97.15 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.15 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 97.15 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 97.14 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 97.14 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 97.13 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.12 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.12 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.11 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 97.11 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.11 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.11 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 97.11 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.08 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 97.07 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.07 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 97.06 | |
| 1oi7_A | 288 | Succinyl-COA synthetase alpha chain; SCS, ligase, | 97.05 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.05 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 97.03 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 97.03 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 97.02 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 97.02 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.0 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 96.99 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 96.99 | |
| 3vtf_A | 444 | UDP-glucose 6-dehydrogenase; two discrete alpha/be | 96.99 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 96.98 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 96.97 | |
| 1iuk_A | 140 | Hypothetical protein TT1466; structural genomics, | 96.96 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 96.96 | |
| 2y0c_A | 478 | BCEC, UDP-glucose dehydrogenase; oxidoreductase, c | 96.95 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 96.94 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 96.93 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 96.92 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 96.92 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 96.91 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 96.9 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 96.9 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 96.9 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 96.88 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.86 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 96.85 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 96.85 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 96.84 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 96.83 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 96.82 | |
| 2o3j_A | 481 | UDP-glucose 6-dehydrogenase; structural genomics, | 96.81 | |
| 3g79_A | 478 | NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; | 96.81 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 96.8 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 96.79 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 96.79 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 96.79 | |
| 3pid_A | 432 | UDP-glucose 6-dehydrogenase; rossmann fold, oxidor | 96.79 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 96.78 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 96.77 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 96.74 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 96.74 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 96.74 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 96.73 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 96.7 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 96.69 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 96.69 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 96.69 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 96.69 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 96.67 | |
| 2q3e_A | 467 | UDP-glucose 6-dehydrogenase; hexamer, structural g | 96.64 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 96.64 | |
| 2yv1_A | 294 | Succinyl-COA ligase [ADP-forming] subunit alpha; C | 96.64 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 96.63 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 96.63 | |
| 2yv2_A | 297 | Succinyl-COA synthetase alpha chain; COA-binding d | 96.62 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 96.62 | |
| 2dc1_A | 236 | L-aspartate dehydrogenase; NAD, oxidoreductase; HE | 96.62 | |
| 3ff4_A | 122 | Uncharacterized protein; structural genomics, PSI- | 96.61 | |
| 4a7p_A | 446 | UDP-glucose dehydrogenase; oxidoreductase, carbohy | 96.61 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 96.6 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 96.6 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 96.59 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 96.58 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.58 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 96.58 | |
| 1dlj_A | 402 | UDP-glucose dehydrogenase; rossmann fold, ternary | 96.58 | |
| 4ffl_A | 363 | PYLC; amino acid, biosynthesis of pyrrolysine, iso | 96.57 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 96.57 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 96.56 |
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-53 Score=398.61 Aligned_cols=374 Identities=90% Similarity=1.465 Sum_probs=301.8
Q ss_pred CCCcc-cccccchhhhhccCCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEeccc
Q 017290 1 MGSTE-GTYGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLR 79 (374)
Q Consensus 1 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~ 79 (374)
||++. ....++.+.+......|+.+||+||||||+||||++++++|+++|++|++++|++.........+++++.+|+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~ 82 (379)
T 2c5a_A 3 MGTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLR 82 (379)
T ss_dssp ------------CCTTCCCCCSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTT
T ss_pred CCccCCcchhhhhHHHHhccccccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCC
Confidence 55554 35566777777777778878899999999999999999999999999999999876544333346789999999
Q ss_pred chhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCccccc-ccCC
Q 017290 80 VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLET-NVSL 158 (374)
Q Consensus 80 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~-~~~~ 158 (374)
|.+.+.++++++|+|||+|+......+...+....+++|+.++.+++++|++.++++|||+||.++|+.....+. ..++
T Consensus 83 d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~ 162 (379)
T 2c5a_A 83 VMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSL 162 (379)
T ss_dssp SHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEE
T ss_pred CHHHHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCc
Confidence 999999999999999999997542222245667788999999999999999999999999999999986432111 1246
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+|+++.+..|.+.|+.+|..+|.+++.++.+.+++++++||+.+||+...... ....+..++.....+...+.+++++.
T Consensus 163 ~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~ 242 (379)
T 2c5a_A 163 KESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGL 242 (379)
T ss_dssp CGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSC
T ss_pred CcccCCCCCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCC
Confidence 77664455678899999999999999998888999999999999999754221 12356666666655443477788888
Q ss_pred ccccceeHHHHHHHHHhhhccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCCCcccccchHHHHHhcCCC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWA 317 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~ 317 (374)
+.++++|++|+|++++.+++++.+++||+++++.+++.|+++.+.+.+|.+.++..+|.+.......+|++|++++|||+
T Consensus 243 ~~~~~i~v~Dva~ai~~~l~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~d~~k~~~~lG~~ 322 (379)
T 2c5a_A 243 QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEKLGWA 322 (379)
T ss_dssp CEECCEEHHHHHHHHHHHHHSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCCCCSBCEECCHHHHHHHSCC
T ss_pred eeEEEEEHHHHHHHHHHHhhccCCCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCCCCcccccCCHHHHHHHhCCC
Confidence 99999999999999999999888899999999999999999999999998877766666554556778999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHhhhhhhhcCceEEEecCCcccCCCCCcccCccccccCCC
Q 017290 318 PSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGTQAPVQLGSLRAADGKE 374 (374)
Q Consensus 318 p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
|+++++++|+++++|++++...........-.|..+++.+.+.||..++||++||||
T Consensus 323 p~~~l~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (379)
T 2c5a_A 323 PNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYGSSKVVGTQAPVQLGSLRAADGKE 379 (379)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHTCCGGGGGSCCCCCCCCCCCTTCCCCSCC--
T ss_pred CCCCHHHHHHHHHHHHHHhHhhhhhccCchhhcchhhhhhccCceeccccccccCCC
Confidence 999999999999999999887765555455579999999999999999999999997
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-47 Score=345.39 Aligned_cols=296 Identities=21% Similarity=0.332 Sum_probs=252.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGM 104 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~ 104 (374)
|+|+||||||+||||++|++.|+++|++|++++|++.... ..+++++.+|++ .+.+.++++++|+|||||+.....
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~ 76 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA---INDYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQ 76 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc---CCceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCC
Confidence 3589999999999999999999999999999999944322 226899999999 999999999999999999975421
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
++...++.|+.++.+++++|++.+++||||+||.++|+..... +++|++ +..|.+.|+.+|..+|++++
T Consensus 77 -----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~----~~~E~~--~~~p~~~Y~~sK~~~E~~~~ 145 (311)
T 3m2p_A 77 -----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSL----PWNEKE--LPLPDLMYGVSKLACEHIGN 145 (311)
T ss_dssp -----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGC----SBCTTS--CCCCSSHHHHHHHHHHHHHH
T ss_pred -----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCC----CCCCCC--CCCCCchhHHHHHHHHHHHH
Confidence 6677889999999999999999999999999999999975432 678887 77889999999999999999
Q ss_pred HHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC-CCCc
Q 017290 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-FREP 263 (374)
Q Consensus 185 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~-~~~~ 263 (374)
.++.+.+++++++||+.+||+.... ...+..++.... .+..+.+++++++.++++|++|+|++++.+++++ .+++
T Consensus 146 ~~~~~~g~~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~ 221 (311)
T 3m2p_A 146 IYSRKKGLCIKNLRFAHLYGFNEKN---NYMINRFFRQAF-HGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGT 221 (311)
T ss_dssp HHHHHSCCEEEEEEECEEECSCC-----CCHHHHHHHHHH-TCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTCCEE
T ss_pred HHHHHcCCCEEEEeeCceeCcCCCC---CCHHHHHHHHHH-cCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCCCCe
Confidence 9999889999999999999997642 245666666554 4677888888999999999999999999999988 7899
Q ss_pred EEecCCCccCHHHHHHHHHHhcCCCCCcccCCC--CCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHHHhhhh
Q 017290 264 VNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG--PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEK 339 (374)
Q Consensus 264 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~--~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 339 (374)
||+++++.+++.|+++.+.+.+|.+.++...+. ........+|++|++++|||+|.++++++|+++++|+++..+.
T Consensus 222 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~ 299 (311)
T 3m2p_A 222 FNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLDDV 299 (311)
T ss_dssp EEECCSCEECHHHHHHHHHHHTTCTTCEEECSSSBCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC----
T ss_pred EEeCCCCcccHHHHHHHHHHHhCCCCcceecCCCCCCCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhcccC
Confidence 999999999999999999999999877666654 3345677899999999999999999999999999999875443
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-47 Score=354.51 Aligned_cols=307 Identities=22% Similarity=0.302 Sum_probs=255.9
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc-----------ccceeEEecccchhhHhhhccCC
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM-----------FCHEFHLVDLRVMDNCLKVTKGV 91 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~i~~~~~dl~~~~~~~~~~~~~ 91 (374)
++++|+||||||+||||++|++.|+++|++|++++|++........ .+++++.+|+.|.+.+.++++++
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 3467999999999999999999999999999999998754322110 46789999999999999999999
Q ss_pred CEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCc
Q 017290 92 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA 171 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~ 171 (374)
|+|||||+.... .....++...+++|+.++.+++++|++.++++|||+||.++|+..... +++|++ +..|.+.
T Consensus 102 d~Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~----~~~E~~--~~~p~~~ 174 (351)
T 3ruf_A 102 DHVLHQAALGSV-PRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPAL----PKVEEN--IGNPLSP 174 (351)
T ss_dssp SEEEECCCCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCS----SBCTTC--CCCCCSH
T ss_pred CEEEECCccCCc-chhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCC----CCccCC--CCCCCCh
Confidence 999999996431 233345667889999999999999999999999999999999876532 578877 6788999
Q ss_pred hHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHH
Q 017290 172 YGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE 250 (374)
Q Consensus 172 y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 250 (374)
|+.+|..+|.+++.++.+.+++++++||+.+||++..... ....+..++..... +..+.+++++++.++++|++|+|+
T Consensus 175 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~g~~~~~~i~v~Dva~ 253 (351)
T 3ruf_A 175 YAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLK-GDDVYINGDGETSRDFCYIDNVIQ 253 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHH-TCCCEEESSSCCEECCEEHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHc-CCCcEEeCCCCeEEeeEEHHHHHH
Confidence 9999999999999999888999999999999999865432 22456666666554 567788899999999999999999
Q ss_pred HHHhhhccC---CCCcEEecCCCccCHHHHHHHHHHhcCCCCC-----cccCC-CCCCCcccccchHHHHHhcCCCcCCC
Q 017290 251 GVLRLTKSD---FREPVNIGSDEMVSMNEMAEIVLSFEDKKLP-----IHHIP-GPEGVRGRNSDNTLIKEKLGWAPSMK 321 (374)
Q Consensus 251 ~i~~~~~~~---~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~-----~~~~~-~~~~~~~~~~d~~k~~~~lg~~p~~~ 321 (374)
+++.++.++ .+++||+++++.+++.|+++.+.+.+|.+.. ....+ .........+|++|++++|||.|+++
T Consensus 254 a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~ 333 (351)
T 3ruf_A 254 MNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDLLKYRPNIK 333 (351)
T ss_dssp HHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHHHHCCCCCCC
T ss_pred HHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHHHhCCCCCCC
Confidence 999998872 5899999999999999999999999988322 21111 12334567899999999999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q 017290 322 LKDGLRITYFWIKEQI 337 (374)
Q Consensus 322 ~~~~l~~~~~~~~~~~ 337 (374)
++++|+++++||+++.
T Consensus 334 ~~~~l~~~~~~~~~~~ 349 (351)
T 3ruf_A 334 IREGLRLSMPWYVRFL 349 (351)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998865
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-46 Score=342.71 Aligned_cols=297 Identities=28% Similarity=0.427 Sum_probs=250.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGF 106 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~ 106 (374)
|+||||||+||||+++++.|+++|++|++++|++.........+++++.+|+.|.+ +.+++++ |+|||+|+... ...
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~-~~~ 77 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPE-VRL 77 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCS-SSG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcCC-CEEEECCCCCC-chh
Confidence 68999999999999999999999999999999876654444557889999999998 8888888 99999999543 234
Q ss_pred ccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHH
Q 017290 107 IQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHY 186 (374)
Q Consensus 107 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~ 186 (374)
...++...+++|+.++.+++++|++.++++|||+||.++|+..... +++|+. +..|.+.|+.+|..+|.+++.+
T Consensus 78 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~----~~~e~~--~~~p~~~Y~~sK~~~e~~~~~~ 151 (312)
T 3ko8_A 78 STTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVI----PTPEEE--PYKPISVYGAAKAAGEVMCATY 151 (312)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSS----SBCTTS--CCCCCSHHHHHHHHHHHHHHHH
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCC----CCCCCC--CCCCCChHHHHHHHHHHHHHHH
Confidence 5556777889999999999999999999999999999999875432 577776 6788999999999999999999
Q ss_pred HhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhcc-----CCC
Q 017290 187 TKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS-----DFR 261 (374)
Q Consensus 187 ~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~-----~~~ 261 (374)
+.+.+++++++||+.+||+... ...+..++.....+...+.+++++.+.++++|++|+|++++.++++ ..+
T Consensus 152 ~~~~g~~~~~lrp~~v~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~ 227 (312)
T 3ko8_A 152 ARLFGVRCLAVRYANVVGPRLR----HGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPF 227 (312)
T ss_dssp HHHHCCEEEEEEECEEECTTCC----SSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSE
T ss_pred HHHhCCCEEEEeeccccCcCCC----CChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCC
Confidence 9988999999999999999753 3456677777666556777888889999999999999999999987 247
Q ss_pred CcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCC-------CCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHH
Q 017290 262 EPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-------PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIK 334 (374)
Q Consensus 262 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-------~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~ 334 (374)
++||+++++.+++.|+++.+.+.+|.+.++...|. +.......+|++|+++.|||+|+++++++|+++++|++
T Consensus 228 ~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~ 307 (312)
T 3ko8_A 228 LALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLA 307 (312)
T ss_dssp EEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CCCSEECBCCHHHHHHHCCCCSSCHHHHHHHHHHHHH
T ss_pred cEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 89999999999999999999999998876665443 22234567899999999999999999999999999998
Q ss_pred Hh
Q 017290 335 EQ 336 (374)
Q Consensus 335 ~~ 336 (374)
++
T Consensus 308 ~~ 309 (312)
T 3ko8_A 308 KE 309 (312)
T ss_dssp HH
T ss_pred hh
Confidence 75
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-46 Score=346.22 Aligned_cols=314 Identities=22% Similarity=0.289 Sum_probs=251.3
Q ss_pred cCCCCCCCCCeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc
Q 017290 18 REPYWPSEKLRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK 89 (374)
Q Consensus 18 ~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~ 89 (374)
.-..|.+++|+||||||+||||++|+++|+++| +.|++++|........ ...+++++.+|++|.+.+.++++
T Consensus 16 ~n~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 95 (346)
T 4egb_A 16 ENLYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIK 95 (346)
T ss_dssp --------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH
T ss_pred cccccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHh
Confidence 334455678999999999999999999999999 7888888775322111 12367899999999999999998
Q ss_pred C--CCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 90 G--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 90 ~--~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
+ +|+|||+|+.... .....++...+++|+.++.+++++|++.++++|||+||.++|+.... ..+++|++ +..
T Consensus 96 ~~~~d~Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~---~~~~~E~~--~~~ 169 (346)
T 4egb_A 96 ERDVQVIVNFAAESHV-DRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGK---TGRFTEET--PLA 169 (346)
T ss_dssp HHTCCEEEECCCCC----------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCS---SCCBCTTS--CCC
T ss_pred hcCCCEEEECCcccch-hhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCc---CCCcCCCC--CCC
Confidence 6 9999999997542 12345667789999999999999999999999999999999997532 22678887 678
Q ss_pred CCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHH
Q 017290 168 PQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 247 (374)
|.+.|+.+|..+|.+++.++.+.+++++++||+.+||++.. ....+..++..... +.++.+++++.+.++++|++|
T Consensus 170 p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D 245 (346)
T 4egb_A 170 PNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQY---PEKLIPLMVTNALE-GKKLPLYGDGLNVRDWLHVTD 245 (346)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCC---TTSHHHHHHHHHHT-TCCCEEETTSCCEECEEEHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCC---ccchHHHHHHHHHc-CCCceeeCCCCeEEeeEEHHH
Confidence 89999999999999999999988999999999999999764 23456666665554 667888899999999999999
Q ss_pred HHHHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCC-cccCCC-CCCCcccccchHHHHHhcCCCcCCCHHH
Q 017290 248 CVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLP-IHHIPG-PEGVRGRNSDNTLIKEKLGWAPSMKLKD 324 (374)
Q Consensus 248 va~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~-~~~~~~~~~d~~k~~~~lg~~p~~~~~~ 324 (374)
+|++++.+++++ .+++||+++++.+++.|+++.+.+.+|.+.+ +...+. +.......+|++|++++|||+|++++++
T Consensus 246 va~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e 325 (346)
T 4egb_A 246 HCSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWEPKYTFEQ 325 (346)
T ss_dssp HHHHHHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC--CCCSCCCBCCHHHHHHHCCCCCCCHHH
T ss_pred HHHHHHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCCCCCcceeeccHHHHHHHcCCCCCCCHHH
Confidence 999999999887 4779999999999999999999999998754 222222 2234556789999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhh
Q 017290 325 GLRITYFWIKEQIEKEK 341 (374)
Q Consensus 325 ~l~~~~~~~~~~~~~~~ 341 (374)
+|+++++||+++.+..+
T Consensus 326 ~l~~~~~~~~~~~~~~~ 342 (346)
T 4egb_A 326 GLQETVQWYEKNEEWWK 342 (346)
T ss_dssp HHHHHHHHHHHCHHHHG
T ss_pred HHHHHHHHHHhhhhhhh
Confidence 99999999998776543
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-46 Score=341.76 Aligned_cols=304 Identities=27% Similarity=0.415 Sum_probs=246.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCcc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMG 105 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~ 105 (374)
||+||||||+||||++|++.|+++|+ |+++++............++++.+|+.+ +.+.++++++|+|||+|+... ..
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~-~~ 77 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESNE-IVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLKGAEEVWHIAANPD-VR 77 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTSC-EEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCC-CC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCC-hh
Confidence 57899999999999999999999994 5555544433333334467889999999 889999999999999999643 22
Q ss_pred cccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHH
Q 017290 106 FIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKH 185 (374)
Q Consensus 106 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~ 185 (374)
....++...+++|+.++.+++++|++.++++|||+||.++|+..... +++|+. +..|.+.|+.+|..+|.+++.
T Consensus 78 ~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~----~~~E~~--~~~~~~~Y~~sK~~~e~~~~~ 151 (313)
T 3ehe_A 78 IGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVI----PTPEDY--PTHPISLYGASKLACEALIES 151 (313)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSS----SBCTTS--CCCCCSHHHHHHHHHHHHHHH
T ss_pred hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCC----CCCCCC--CCCCCCHHHHHHHHHHHHHHH
Confidence 44556778899999999999999999999999999999999875432 577776 677889999999999999999
Q ss_pred HHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC-CCCcE
Q 017290 186 YTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-FREPV 264 (374)
Q Consensus 186 ~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~-~~~~~ 264 (374)
++.+.+++++++||+.+||++.. ...+..++.....+...+.+++++++.++++|++|+|++++.+++.. .+++|
T Consensus 152 ~~~~~g~~~~ilRp~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ 227 (313)
T 3ehe_A 152 YCHTFDMQAWIYRFANVIGRRST----HGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIF 227 (313)
T ss_dssp HHHHTTCEEEEEECSCEESTTCC----CSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSSEEEE
T ss_pred HHHhcCCCEEEEeeccccCcCCC----cChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCCCceE
Confidence 99989999999999999999753 34666777777765577778899999999999999999999999854 57899
Q ss_pred EecCCCccCHHHHHHHHHHhcCCCCCcccCCC----CCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHHHhhhhh
Q 017290 265 NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG----PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKE 340 (374)
Q Consensus 265 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~----~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~ 340 (374)
|+++++++++.|+++.+.+.+|.+..+...+. ........+|++|++ +|||+|+++++++|+++++|++++.+..
T Consensus 228 ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lG~~p~~~~~e~l~~~~~~~~~~~~~~ 306 (313)
T 3ehe_A 228 NIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKLK-RLGWKPRYNSEEAVRMAVRDLVEDLDEE 306 (313)
T ss_dssp ECCCSCCEEHHHHHHHHHHHTTCCCEEEEC------------CCBCCHHHH-HHTCCCSCCHHHHHHHHHHHHHHHHHC-
T ss_pred EECCCCCeeHHHHHHHHHHHhCCCCceEECCCccCCccccceeccCHHHHH-HcCCCCCCCHHHHHHHHHHHHHhCcccc
Confidence 99999999999999999999998766554442 122344678999995 5899999999999999999999987776
Q ss_pred hhc
Q 017290 341 KTQ 343 (374)
Q Consensus 341 ~~~ 343 (374)
...
T Consensus 307 ~~~ 309 (313)
T 3ehe_A 307 GHH 309 (313)
T ss_dssp ---
T ss_pred ccc
Confidence 543
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=345.60 Aligned_cols=306 Identities=21% Similarity=0.277 Sum_probs=251.0
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHh--CCCEEEEEeCCCCc-------------ccccccccceeEEecccchhhHhhh
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKS--EGHYIIASDWKKNE-------------HMTEDMFCHEFHLVDLRVMDNCLKV 87 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~-------------~~~~~~~~i~~~~~dl~~~~~~~~~ 87 (374)
.+++|+||||||+||||+++++.|++ .|++|++++|+... .......++.++.+|+++.+.+..+
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 86 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL 86 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh
Confidence 45679999999999999999999999 89999999997651 1112233568999999999999998
Q ss_pred -ccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 88 -TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 88 -~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
..++|+|||||+... .+..++...+++|+.++.+++++|++.+++ |||+||.++|+.... +++|++ +.
T Consensus 87 ~~~~~D~vih~A~~~~---~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-----~~~E~~--~~ 155 (362)
T 3sxp_A 87 EKLHFDYLFHQAAVSD---TTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-----PNVVGK--NE 155 (362)
T ss_dssp TTSCCSEEEECCCCCG---GGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-----SBCTTS--CC
T ss_pred hccCCCEEEECCccCC---ccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-----CCCCCC--CC
Confidence 789999999999643 345677788999999999999999999985 999999999987653 578887 77
Q ss_pred CCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEeeCCCcccccceeH
Q 017290 167 EPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
.|.+.|+.+|..+|.+++.++.+ ++++++||+.+|||+..... ....+..++..... +..+.+++++.+.++++|+
T Consensus 156 ~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~i~v 232 (362)
T 3sxp_A 156 SPENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMA-FKEVKLFEFGEQLRDFVYI 232 (362)
T ss_dssp CCSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHT-TSEEECSGGGCCEEECEEH
T ss_pred CCCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHh-CCCeEEECCCCeEEccEEH
Confidence 88999999999999999998765 89999999999999864321 12456666665554 6677777888899999999
Q ss_pred HHHHHHHHhhhccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCC--CCCcccccchHHHHHhcCCCcCCCHH
Q 017290 246 DECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP--EGVRGRNSDNTLIKEKLGWAPSMKLK 323 (374)
Q Consensus 246 ~Dva~~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--~~~~~~~~d~~k~~~~lg~~p~~~~~ 323 (374)
+|+|++++.+++++..++||+++++++++.|+++.+.+.+| +.++...|.+ .......+|++|+++.|||.|.++++
T Consensus 233 ~Dva~ai~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~ 311 (362)
T 3sxp_A 233 EDVIQANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPYAFFQKHTQAHIEPTILDLDYTPLYDLE 311 (362)
T ss_dssp HHHHHHHHHHTTCSSCEEEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC-------CCCCBCCHHHHHHHCCCCCCCHH
T ss_pred HHHHHHHHHHHhcCCCCEEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCCcCcccceecCHHHHHHHhCCCCCCCHH
Confidence 99999999999988666999999999999999999999999 7666666543 33556789999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhc
Q 017290 324 DGLRITYFWIKEQIEKEKTQ 343 (374)
Q Consensus 324 ~~l~~~~~~~~~~~~~~~~~ 343 (374)
++|+++++|+++.....+..
T Consensus 312 e~l~~~~~~~~~~~~~~~~~ 331 (362)
T 3sxp_A 312 SGIKDYLPHIHAIFKGQRAK 331 (362)
T ss_dssp HHHHHHHHHHTCC-------
T ss_pred HHHHHHHHHHHHHhhccccc
Confidence 99999999999877665443
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-45 Score=338.76 Aligned_cols=307 Identities=20% Similarity=0.259 Sum_probs=251.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-------cccceeEEecccchhhHhhhcc--CCCEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-------MFCHEFHLVDLRVMDNCLKVTK--GVDHVF 95 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~i~~~~~dl~~~~~~~~~~~--~~d~vi 95 (374)
++|+||||||+||||+++++.|+++|++|++++|+........ ..+++++.+|++|.+.+.++++ ++|+||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 5689999999999999999999999999999999876533211 2357889999999999999998 899999
Q ss_pred EcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHh
Q 017290 96 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLE 175 (374)
Q Consensus 96 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~s 175 (374)
|+|+.... ......+...++.|+.++.++++++++.++++|||+||.++|+.... .+++|+. +..|.+.|+.+
T Consensus 84 h~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~----~~~~e~~--~~~~~~~Y~~s 156 (341)
T 3enk_A 84 HFAALKAV-GESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPER----SPIDETF--PLSATNPYGQT 156 (341)
T ss_dssp ECCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSS----SSBCTTS--CCBCSSHHHHH
T ss_pred ECcccccc-CccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCC----CCCCCCC--CCCCCChhHHH
Confidence 99996531 12334456778899999999999999999999999999999986543 2577777 66788999999
Q ss_pred HHHHHHHHHHHHhhhC-CcEEEEeeCcccCCCCCC------CC-CCCcHHHHHHHHhccCCceEeeC------CCccccc
Q 017290 176 KLASEELCKHYTKDFG-IECRVGRFHNIYGPFGTW------KG-MEKAPAAFCRKALTSTDKFEMWG------DGLQTRS 241 (374)
Q Consensus 176 K~~~E~~~~~~~~~~~-~~~~ilR~~~v~g~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 241 (374)
|..+|.+++.++.+.+ ++++++||+.+||+.... .. ...++..+..........+.+++ ++++.++
T Consensus 157 K~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ 236 (341)
T 3enk_A 157 KLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRD 236 (341)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEEC
T ss_pred HHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEe
Confidence 9999999999988776 999999999999996421 11 12333333333333346677777 7889999
Q ss_pred ceeHHHHHHHHHhhhcc----CCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCC-CCCcccccchHHHHHhcCC
Q 017290 242 FTFIDECVEGVLRLTKS----DFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP-EGVRGRNSDNTLIKEKLGW 316 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~----~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-~~~~~~~~d~~k~~~~lg~ 316 (374)
|+|++|+|++++.++++ ..+++||+++++.+++.|+++.+.+.+|.+.++...+.. .......+|++|++++|||
T Consensus 237 ~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~ 316 (341)
T 3enk_A 237 YIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARRPGDVAECYANPAAAAETIGW 316 (341)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHHHHHHCC
T ss_pred eEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCCCCCCccccccCHHHHHHHcCC
Confidence 99999999999999886 468999999999999999999999999998877666543 3345678899999999999
Q ss_pred CcCCCHHHHHHHHHHHHHHhhh
Q 017290 317 APSMKLKDGLRITYFWIKEQIE 338 (374)
Q Consensus 317 ~p~~~~~~~l~~~~~~~~~~~~ 338 (374)
+|+++++++|+++++|++++.+
T Consensus 317 ~p~~~l~~~l~~~~~~~~~~~~ 338 (341)
T 3enk_A 317 KAERDLERMCADHWRWQENNPR 338 (341)
T ss_dssp CCCCCHHHHHHHHHHHHHHSTT
T ss_pred CCCCCHHHHHHHHHHHHHhcCc
Confidence 9999999999999999998643
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=342.29 Aligned_cols=303 Identities=22% Similarity=0.296 Sum_probs=249.9
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
....+|+||||||+||||++|++.|+++|++|++++|++.. .+++++.+|+.|.+.+.++++++|+|||+|+..
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~ 88 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFM 88 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEEECCccc
Confidence 34467899999999999999999999999999999998764 357899999999999999999999999999965
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHH
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEE 181 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~ 181 (374)
. ......+..+++|+.++.+++++|++.++++|||+||.++|+.... ...+++|+. +..|.+.|+.+|..+|.
T Consensus 89 ~---~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~--~~~~~~E~~--~~~~~~~Y~~sK~~~E~ 161 (347)
T 4id9_A 89 S---WAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRP--EFLPVTEDH--PLCPNSPYGLTKLLGEE 161 (347)
T ss_dssp C---SSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSC--SSSSBCTTS--CCCCCSHHHHHHHHHHH
T ss_pred C---cchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCC--CCCCcCCCC--CCCCCChHHHHHHHHHH
Confidence 4 2223336788999999999999999999999999999999987321 122678887 67889999999999999
Q ss_pred HHHHHHhhhCCcEEEEeeCccc-------------CCCCCCCC--------CCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 182 LCKHYTKDFGIECRVGRFHNIY-------------GPFGTWKG--------MEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 182 ~~~~~~~~~~~~~~ilR~~~v~-------------g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
+++.+..+.+++++++||+.+| |++..... ....+..++... ..+.++.+++++.+.+
T Consensus 162 ~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~ 240 (347)
T 4id9_A 162 LVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSR-DIGEPSHILARNENGR 240 (347)
T ss_dssp HHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHH-CCSSCCEEEEECTTCC
T ss_pred HHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHH-HcCCCeEEeCCCCccc
Confidence 9999998889999999999999 76421100 023444455544 4467777888888899
Q ss_pred cc----eeHHHHHHHHHhhhccC--CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCCCcccccchHHHHHhc
Q 017290 241 SF----TFIDECVEGVLRLTKSD--FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKL 314 (374)
Q Consensus 241 ~~----i~~~Dva~~i~~~~~~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~d~~k~~~~l 314 (374)
++ +|++|+|++++.+++++ .+++||+++++.+++.|+++.+.+.+|.+.++..+|... ....+|++|++++|
T Consensus 241 ~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~--~~~~~d~~k~~~~l 318 (347)
T 4id9_A 241 PFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPGDG--VYYHTSNERIRNTL 318 (347)
T ss_dssp BCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSSCC--CBCCBCCHHHHHHH
T ss_pred CCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCCcc--cccccCHHHHHHHh
Confidence 99 99999999999999887 388999999999999999999999999987665555433 36789999999999
Q ss_pred CCCcCCCHHHHHHHHHHHHHHhhhhh
Q 017290 315 GWAPSMKLKDGLRITYFWIKEQIEKE 340 (374)
Q Consensus 315 g~~p~~~~~~~l~~~~~~~~~~~~~~ 340 (374)
||.|+++++++|+++++|++++....
T Consensus 319 G~~p~~~~~~~l~~~~~~~~~~~~~~ 344 (347)
T 4id9_A 319 GFEAEWTMDRMLEEAATARRQRLAKE 344 (347)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHCC--
T ss_pred CCCCCCCHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999876553
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-46 Score=349.53 Aligned_cols=310 Identities=17% Similarity=0.253 Sum_probs=251.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCCCCcccccc-cccceeEEeccc-chhhHhhhccCCCEEEEcccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSE-GHYIIASDWKKNEHMTED-MFCHEFHLVDLR-VMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~-~~~i~~~~~dl~-~~~~~~~~~~~~d~vi~~a~~ 100 (374)
++||+||||||+||||++|++.|+++ ||+|++++|++....... ..+++++.+|++ +.+.+.++++++|+|||||+.
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~ 101 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAI 101 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCcc
Confidence 35789999999999999999999998 999999999876544332 257899999999 999999999999999999996
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCC----C-CCCCCchHHh
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----P-AEPQDAYGLE 175 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~----~-~~~~~~y~~s 175 (374)
... ..+..++...+++|+.++.+++++|++.+ ++|||+||.++|+..... ++.|++.. + ..|.+.|+.+
T Consensus 102 ~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~----~~~e~~~~~~~~p~~~p~~~Y~~s 175 (372)
T 3slg_A 102 ATP-ATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADE----QFDPDASALTYGPINKPRWIYACS 175 (372)
T ss_dssp CCH-HHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCS----SBCTTTCCEEECCTTCTTHHHHHH
T ss_pred ccH-HHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCC----CCCccccccccCCCCCCCCcHHHH
Confidence 542 12234566778999999999999999999 899999999999975432 45665521 1 1466799999
Q ss_pred HHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCC-----CCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHH
Q 017290 176 KLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWK-----GMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE 250 (374)
Q Consensus 176 K~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 250 (374)
|..+|.+++.++.+ +++++++||+.+||++.... .....+..++..... +..+.+++++++.++++|++|+|+
T Consensus 176 K~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~i~v~Dva~ 253 (372)
T 3slg_A 176 KQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVR-GENISLVDGGSQKRAFTYVDDGIS 253 (372)
T ss_dssp HHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHH-TCCEEEGGGGCCEEECEEHHHHHH
T ss_pred HHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHc-CCCcEEeCCCceEEEEEEHHHHHH
Confidence 99999999999887 99999999999999975421 123355666666554 677888888889999999999999
Q ss_pred HHHhhhccC----CCCcEEecCC-CccCHHHHHHHHHHhcCCCCCcccCCCC----------------CCCcccccchHH
Q 017290 251 GVLRLTKSD----FREPVNIGSD-EMVSMNEMAEIVLSFEDKKLPIHHIPGP----------------EGVRGRNSDNTL 309 (374)
Q Consensus 251 ~i~~~~~~~----~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~----------------~~~~~~~~d~~k 309 (374)
+++.+++++ .+++||++++ +.+|+.|+++.+.+.+|.+.++...+.. .......+|++|
T Consensus 254 a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k 333 (372)
T 3slg_A 254 ALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIEN 333 (372)
T ss_dssp HHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-------------CCCCBCCHH
T ss_pred HHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCccccceeecCHHH
Confidence 999999875 4789999994 8999999999999999887554332210 234456789999
Q ss_pred HHHhcCCCcCCCHHHHHHHHHHHHHHhhhhhh
Q 017290 310 IKEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 341 (374)
Q Consensus 310 ~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~~ 341 (374)
++++|||+|+++++++|+++++||+++..+.+
T Consensus 334 ~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~ 365 (372)
T 3slg_A 334 TMQELGWAPQFTFDDALRQIFEAYRGHVADAR 365 (372)
T ss_dssp HHHHHTCCCCCCHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998776654
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-45 Score=336.21 Aligned_cols=301 Identities=19% Similarity=0.273 Sum_probs=246.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccC--CCEEEEccccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKG--VDHVFNLAADM 101 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~--~d~vi~~a~~~ 101 (374)
++||+||||||+||||++|++.|+++|+ +. ......++++.+|++|.+.+.+++++ +|+|||||+..
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~-----~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~ 72 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LP-----GEDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMV 72 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC------CT-----TCEEEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC------cc-----cccccccCceecccCCHHHHHHHHhhcCCCEEEECceec
Confidence 4679999999999999999999999998 11 11223456678999999999999975 99999999975
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCC--CCCCCC-chHHhHHH
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW--PAEPQD-AYGLEKLA 178 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~--~~~~~~-~y~~sK~~ 178 (374)
+.......++...+++|+.++.+++++|++.++++|||+||.++|+..... +++|+++. +..|.+ .|+.+|..
T Consensus 73 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~----~~~E~~~~~~~~~p~~~~Y~~sK~~ 148 (319)
T 4b8w_A 73 GGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTY----PIDETMIHNGPPHNSNFGYSYAKRM 148 (319)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCS----SBCGGGGGBSCCCSSSHHHHHHHHH
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCC----CccccccccCCCCCCcchHHHHHHH
Confidence 432234456677899999999999999999999999999999999875432 56776532 334555 59999999
Q ss_pred HHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHH---hccCCceEeeCCCcccccceeHHHHHHHHHh
Q 017290 179 SEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKA---LTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 254 (374)
Q Consensus 179 ~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~ 254 (374)
+|++++.++++.+++++++||+.+|||+..... ....+..++..+ +..+.++.+++++++.++++|++|+|++++.
T Consensus 149 ~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~ 228 (319)
T 4b8w_A 149 IDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIW 228 (319)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHH
Confidence 999999999989999999999999999865332 234555555552 3447788888999999999999999999999
Q ss_pred hhccC---CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCC-CCCcccccchHHHHHhcCCCcCCCHHHHHHHHH
Q 017290 255 LTKSD---FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP-EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITY 330 (374)
Q Consensus 255 ~~~~~---~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~ 330 (374)
+++++ .+++||+++++.+++.|+++.+.+.+|.+.++...+.. .......+|++|+++.|||.|.++++++|++++
T Consensus 229 ~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~ 308 (319)
T 4b8w_A 229 VLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRFTPFKQAVKETC 308 (319)
T ss_dssp HHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTSCCCCSCCCBCCHHHHHHCTTCCCCCHHHHHHHHH
T ss_pred HHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCCCcCcccccCCHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 99874 25689999999999999999999999988776665543 334556899999999999999999999999999
Q ss_pred HHHHHhhhh
Q 017290 331 FWIKEQIEK 339 (374)
Q Consensus 331 ~~~~~~~~~ 339 (374)
+|++++.++
T Consensus 309 ~~~~~~~~~ 317 (319)
T 4b8w_A 309 AWFTDNYEQ 317 (319)
T ss_dssp HHHHHSCSS
T ss_pred HHHHHHHhh
Confidence 999987654
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=333.47 Aligned_cols=305 Identities=23% Similarity=0.313 Sum_probs=247.2
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMGG 103 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~~ 103 (374)
||+||||||+||||+++++.|+++|++|++++|...........+++++.+|+.+.+.+.++++ ++|+|||+|+....
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~~ 80 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLV 80 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccCc
Confidence 5899999999999999999999999999999987654322212257889999999999999998 99999999996431
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHH
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELC 183 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~ 183 (374)
.....++...+++|+.++.+++++|++.++++|||+||.++|+.... .+++|++ +..|.+.|+.+|..+|.++
T Consensus 81 -~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~----~~~~E~~--~~~~~~~Y~~sK~~~e~~~ 153 (330)
T 2c20_A 81 -GVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDV----DLITEET--MTNPTNTYGETKLAIEKML 153 (330)
T ss_dssp -HHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSS----SSBCTTS--CCCCSSHHHHHHHHHHHHH
T ss_pred -cccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCC----CCCCcCC--CCCCCChHHHHHHHHHHHH
Confidence 11234566788899999999999999999999999999999986432 2578877 5678899999999999999
Q ss_pred HHHHhhhCCcEEEEeeCcccCCCCCCC------CCCCcHHHHHHHHhccCCceEeeC------CCcccccceeHHHHHHH
Q 017290 184 KHYTKDFGIECRVGRFHNIYGPFGTWK------GMEKAPAAFCRKALTSTDKFEMWG------DGLQTRSFTFIDECVEG 251 (374)
Q Consensus 184 ~~~~~~~~~~~~ilR~~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~~Dva~~ 251 (374)
+.++.+.+++++++||+.+||+..... ....++..++......+..+.+++ ++++.++++|++|+|++
T Consensus 154 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a 233 (330)
T 2c20_A 154 HWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAA 233 (330)
T ss_dssp HHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHH
T ss_pred HHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHH
Confidence 999988899999999999999963210 012334444443333345677766 67788999999999999
Q ss_pred HHhhhccC----CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCC-CCcccccchHHHHHhcCCCcCC-CHHHH
Q 017290 252 VLRLTKSD----FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE-GVRGRNSDNTLIKEKLGWAPSM-KLKDG 325 (374)
Q Consensus 252 i~~~~~~~----~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~d~~k~~~~lg~~p~~-~~~~~ 325 (374)
++.+++++ .+++||+++++++++.|+++.+.+.+|.+.++...+... ......+|++|++++|||+|++ +++++
T Consensus 234 ~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~ 313 (330)
T 2c20_A 234 HFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARLVASSQKAKEKLGWDPRYVNVKTI 313 (330)
T ss_dssp HHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECCCSSCCSEECBCCHHHHHHHCCCCSCCCHHHH
T ss_pred HHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCCCCcccccccCHHHHHHHhCCCCccCCHHHH
Confidence 99998763 368999999999999999999999999887766555432 3445788999999999999998 99999
Q ss_pred HHHHHHHHHHhh
Q 017290 326 LRITYFWIKEQI 337 (374)
Q Consensus 326 l~~~~~~~~~~~ 337 (374)
|+++++|++++.
T Consensus 314 l~~~~~~~~~~~ 325 (330)
T 2c20_A 314 IEHAWNWHQKQP 325 (330)
T ss_dssp HHHHHHHHHHCS
T ss_pred HHHHHHHHHHhh
Confidence 999999998754
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-44 Score=331.59 Aligned_cols=306 Identities=21% Similarity=0.260 Sum_probs=249.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-c----------cccceeEEecccchhhHhhhccCCC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-D----------MFCHEFHLVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~----------~~~i~~~~~dl~~~~~~~~~~~~~d 92 (374)
+.+|+||||||+||||+++++.|++.|++|++++|++...... . ..+++++.+|++|.+.+.++++++|
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 104 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD 104 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence 3568999999999999999999999999999999976431110 0 1367889999999999999999999
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCch
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAY 172 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y 172 (374)
+|||+|+.... .....++...+++|+.++.+++++|++.++++|||+||.++|+.... .+++|++ +..|.+.|
T Consensus 105 ~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~----~~~~E~~--~~~~~~~Y 177 (352)
T 1sb8_A 105 YVLHQAALGSV-PRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPG----LPKVEDT--IGKPLSPY 177 (352)
T ss_dssp EEEECCSCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCC----SSBCTTC--CCCCCSHH
T ss_pred EEEECCcccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCC----CCCCCCC--CCCCCChh
Confidence 99999996431 11223566778899999999999999999999999999999987543 2577776 56788999
Q ss_pred HHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHH
Q 017290 173 GLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG 251 (374)
Q Consensus 173 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 251 (374)
+.+|..+|.+++.++.+.+++++++||+.+||+...... ....+..++..... +.++.+++++++.++++|++|+|++
T Consensus 178 ~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~g~~~~~~i~v~Dva~a 256 (352)
T 1sb8_A 178 AVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQ-GDDVYINGDGETSRDFCYIENTVQA 256 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHH-TCCCEEESSSCCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHC-CCCcEEeCCCCceEeeEEHHHHHHH
Confidence 999999999999998888999999999999999754321 12345556655544 5667777888899999999999999
Q ss_pred HHhhhccC---CCCcEEecCCCccCHHHHHHHHHHhc---CCCCCcc--cCCC-CCCCcccccchHHHHHhcCCCcCCCH
Q 017290 252 VLRLTKSD---FREPVNIGSDEMVSMNEMAEIVLSFE---DKKLPIH--HIPG-PEGVRGRNSDNTLIKEKLGWAPSMKL 322 (374)
Q Consensus 252 i~~~~~~~---~~~~~~i~~~~~~s~~e~~~~i~~~~---g~~~~~~--~~~~-~~~~~~~~~d~~k~~~~lg~~p~~~~ 322 (374)
++.++.+. .+++||+++++.+++.|+++.+.+.+ |.+.+.. ..+. +.......+|++|++++|||.|++++
T Consensus 257 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~ 336 (352)
T 1sb8_A 257 NLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDV 336 (352)
T ss_dssp HHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCCH
T ss_pred HHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCCHHHHHHHhCCCCCCCH
Confidence 99888762 57899999999999999999999999 8876522 2221 22345567899999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 017290 323 KDGLRITYFWIKEQI 337 (374)
Q Consensus 323 ~~~l~~~~~~~~~~~ 337 (374)
+++|+++++|+++..
T Consensus 337 ~e~l~~~~~~~~~~~ 351 (352)
T 1sb8_A 337 SAGVALAMPWYIMFL 351 (352)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998653
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=328.43 Aligned_cols=299 Identities=24% Similarity=0.322 Sum_probs=244.7
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccCCc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMGGM 104 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~~~ 104 (374)
|+||||||+||||++++++|+++|++|++++|...........+++++.+|++|.+.+.++++ ++|+|||+|+....
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~- 79 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASV- 79 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCH-
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCc-
Confidence 589999999999999999999999999999985433222112356788999999999999887 89999999986431
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecc-cccCC-CcccccccCCCCCCCCCCCCCCchHHhHHHHHHH
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA-CIYPE-FKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL 182 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~-~vy~~-~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~ 182 (374)
.....++...+++|+.++.+++++|++.++++|||+||. ++|+. .. +.+++|+. +..|.+.|+.+|..+|.+
T Consensus 80 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~----~~~~~E~~--~~~~~~~Y~~sK~~~e~~ 153 (311)
T 2p5y_A 80 KVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPE----GERAEETW--PPRPKSPYAASKAAFEHY 153 (311)
T ss_dssp HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCT----TCCBCTTS--CCCCCSHHHHHHHHHHHH
T ss_pred hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCC----CCCcCCCC--CCCCCChHHHHHHHHHHH
Confidence 122335566789999999999999999999999999998 89985 22 12567766 567788999999999999
Q ss_pred HHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEee-----CCCcccccceeHHHHHHHHHhhhc
Q 017290 183 CKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMW-----GDGLQTRSFTFIDECVEGVLRLTK 257 (374)
Q Consensus 183 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~Dva~~i~~~~~ 257 (374)
++.++.+.+++++++||+.+|||..........+..++..... +.++.++ +++.+.++++|++|+|++++.+++
T Consensus 154 ~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~ 232 (311)
T 2p5y_A 154 LSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLK-GLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALF 232 (311)
T ss_dssp HHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHH-TCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHc-CCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHh
Confidence 9999888899999999999999975422112344555555444 5667777 788888999999999999999998
Q ss_pred cCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCC-CCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHHH
Q 017290 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP-EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKE 335 (374)
Q Consensus 258 ~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~ 335 (374)
++ +++||+++++.+|+.|+++.+.+.+|.+.++...|.. .......+|++|+++ |||.|.++++++|+++++|+++
T Consensus 233 ~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~~~l~~~~~~~~~ 309 (311)
T 2p5y_A 233 SL-EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDLERSVLSPLKLMA-HGWRPKVGFQEGIRLTVDHFRG 309 (311)
T ss_dssp HC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCCTTCCSBCCBCCHHHHT-TTCCCSSCHHHHHHHHHHHHHT
T ss_pred CC-CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCCccchhhccCCHHHHHH-CCCCCCCCHHHHHHHHHHHHHh
Confidence 76 8899999999999999999999999988776655543 234567899999999 9999999999999999999975
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-44 Score=329.83 Aligned_cols=309 Identities=17% Similarity=0.181 Sum_probs=247.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc--CCCEEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK--GVDHVF 95 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi 95 (374)
.++|+||||||+||||+++++.|+++|++|++++|++...... ...+++++.+|+.|.+.+.++++ ++|+||
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVY 91 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence 3679999999999999999999999999999999987542110 12357889999999999999887 479999
Q ss_pred EcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCC-CeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHH
Q 017290 96 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV-KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGL 174 (374)
Q Consensus 96 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~ 174 (374)
|+|+.... .....++...+++|+.++.+++++|++.++ ++|||+||.++|+.... .+++|++ +..|.+.|+.
T Consensus 92 h~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~----~~~~E~~--~~~p~~~Y~~ 164 (335)
T 1rpn_A 92 NLAAQSFV-GASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQA----ERQDENT--PFYPRSPYGV 164 (335)
T ss_dssp ECCSCCCH-HHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSS----SSBCTTS--CCCCCSHHHH
T ss_pred ECccccch-hhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCC----CCCCccc--CCCCCChhHH
Confidence 99996431 122345677889999999999999999986 89999999999987543 2577776 6678899999
Q ss_pred hHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHh
Q 017290 175 EKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 254 (374)
Q Consensus 175 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~ 254 (374)
+|..+|.+++.++.+.+++++++||+.+|||+.........+..++.....+......++++++.++++|++|+|++++.
T Consensus 165 sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~ 244 (335)
T 1rpn_A 165 AKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWL 244 (335)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHH
Confidence 99999999999998889999999999999997532111122444555555443344456888899999999999999999
Q ss_pred hhccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCc-ccCC----CCCCCcccccchHHHHHhcCCCcCCCHHHHHHHH
Q 017290 255 LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPI-HHIP----GPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRIT 329 (374)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~----~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~ 329 (374)
+++++.+++||+++++++++.|+++.+.+.+|.+.+. ..++ .+.......+|++|++++|||+|.++++++|+++
T Consensus 245 ~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~ 324 (335)
T 1rpn_A 245 MLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMM 324 (335)
T ss_dssp HHHSSSCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHH
T ss_pred HHhcCCCCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHHHHhcCCCcCCCHHHHHHHH
Confidence 9998878999999999999999999999999986321 1111 1223345678999999999999999999999999
Q ss_pred HHHHHHhhhh
Q 017290 330 YFWIKEQIEK 339 (374)
Q Consensus 330 ~~~~~~~~~~ 339 (374)
++|++++...
T Consensus 325 ~~~~~~~~~~ 334 (335)
T 1rpn_A 325 VEADLRRVSR 334 (335)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhhcc
Confidence 9999987653
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-44 Score=328.54 Aligned_cols=300 Identities=20% Similarity=0.261 Sum_probs=245.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccC--CCEEEEccccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKG--VDHVFNLAADM 101 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~--~d~vi~~a~~~ 101 (374)
..+|+||||||+||||+++++.|+++|++|++++|++.. .. .+++++.+|++|.+.+.+++++ +|+|||||+..
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~---l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~ 85 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL---PNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKS 85 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC---TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCC
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc---ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCccc
Confidence 367999999999999999999999999999999998765 21 2678899999999999998875 99999999965
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhC-CCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHH
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRIS-GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASE 180 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E 180 (374)
.. .....+....+++|+.++.+++++|++. ++++|||+||.++|+... +.+.+++|++ +..|.+.|+.+|..+|
T Consensus 86 ~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~--~~~~~~~E~~--~~~~~~~Y~~sK~~~E 160 (321)
T 2pk3_A 86 SV-KDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMIL--PEESPVSEEN--QLRPMSPYGVSKASVG 160 (321)
T ss_dssp CH-HHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCC--GGGCSBCTTS--CCBCCSHHHHHHHHHH
T ss_pred ch-hhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCC--CCCCCCCCCC--CCCCCCccHHHHHHHH
Confidence 31 1233456778999999999999999876 588999999999998641 0122678877 6678899999999999
Q ss_pred HHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhc--cC--CceEeeCCCcccccceeHHHHHHHHHhhh
Q 017290 181 ELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALT--ST--DKFEMWGDGLQTRSFTFIDECVEGVLRLT 256 (374)
Q Consensus 181 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~i~~~Dva~~i~~~~ 256 (374)
.+++.++.+.+++++++||+.+||+.... ...+..++..... .+ .++.+++++.+.++++|++|+|++++.++
T Consensus 161 ~~~~~~~~~~gi~~~ilrp~~v~g~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~ 237 (321)
T 2pk3_A 161 MLARQYVKAYGMDIIHTRTFNHIGPGQSL---GFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLS 237 (321)
T ss_dssp HHHHHHHHHHCCEEEEEEECEEECTTCCT---TSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeCcccCcCCCC---CchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHH
Confidence 99999988889999999999999997642 2244445544433 13 46677788888999999999999999999
Q ss_pred ccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCC---CCCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHH
Q 017290 257 KSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP---GPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332 (374)
Q Consensus 257 ~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~---~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~ 332 (374)
+++ .+++||+++++.+++.|+++.+.+.+|.+.++...| .+.......+|++|++++|||+|.++++++|+++++|
T Consensus 238 ~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~ 317 (321)
T 2pk3_A 238 QYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQS 317 (321)
T ss_dssp HHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGGCCSSCCSBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHH
T ss_pred hCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeeccccCCCcccchhccCHHHHHHHcCCCcCCCHHHHHHHHHHH
Confidence 876 478999999999999999999999999876655444 1223456788999999999999999999999999999
Q ss_pred HHH
Q 017290 333 IKE 335 (374)
Q Consensus 333 ~~~ 335 (374)
+++
T Consensus 318 ~~~ 320 (321)
T 2pk3_A 318 YRQ 320 (321)
T ss_dssp HHT
T ss_pred Hhc
Confidence 975
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-44 Score=335.55 Aligned_cols=310 Identities=21% Similarity=0.292 Sum_probs=244.2
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcccccc--cccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTED--MFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~--~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
..+|+||||||+||||+++++.|+++| ++|++++|+........ ..+++++.+|+.|.+.+.++++++|+|||+|+.
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~ 109 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATY 109 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCC
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCc
Confidence 457899999999999999999999999 99999999865432111 346788999999999999999999999999996
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhC-CCCeEEEeecccccCCCcccccccCCC--CCCCC-CC-CCCCchHHh
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRIS-GVKRFFYASSACIYPEFKQLETNVSLK--ESDAW-PA-EPQDAYGLE 175 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~i~~Ss~~vy~~~~~~~~~~~~~--e~~~~-~~-~~~~~y~~s 175 (374)
... .....++...+++|+.++.+++++|++. ++++|||+||.++|+..... +++ |+.+. +. .|.+.|+.+
T Consensus 110 ~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~----~~~~~E~~~~~~~~~~~~~Y~~s 184 (377)
T 2q1s_A 110 HGN-QSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFD----DAKATEETDIVSLHNNDSPYSMS 184 (377)
T ss_dssp SCH-HHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC------------------CCCCCCCSSCCCSHHHHH
T ss_pred cCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCC----CcCcccccccccccCCCCchHHH
Confidence 431 1122356678899999999999999998 89999999999999875421 455 55421 33 677899999
Q ss_pred HHHHHHHHHHHHhhhCCcEEEEeeCcccCCCC---------CCCC-CCCcHHHHHHHHhccCCceEeeCCCcccccceeH
Q 017290 176 KLASEELCKHYTKDFGIECRVGRFHNIYGPFG---------TWKG-MEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 176 K~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
|..+|.+++.++.+.+++++++||+.+||+.. .... ....+..++..... +.++.+++++++.++++|+
T Consensus 185 K~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~g~g~~~~~~i~v 263 (377)
T 2q1s_A 185 KIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALK-GMPLPLENGGVATRDFIFV 263 (377)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHT-TCCCCCSGGGCCEECCEEH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHc-CCCeEEeCCCCeEEeeEEH
Confidence 99999999999888899999999999999975 2100 02345556665544 5666677888889999999
Q ss_pred HHHHHH-HHhhhccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCC-CCc-ccccchHHHHHhcCCCcCCCH
Q 017290 246 DECVEG-VLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE-GVR-GRNSDNTLIKEKLGWAPSMKL 322 (374)
Q Consensus 246 ~Dva~~-i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-~~~-~~~~d~~k~~~~lg~~p~~~~ 322 (374)
+|+|++ ++.+++++..++||+++++.+++.|+++.+.+.+|.+.++...|... ... ...+|++|++++|||.|.+++
T Consensus 264 ~Dva~a~i~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~d~~k~~~~lG~~p~~~l 343 (377)
T 2q1s_A 264 EDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNTELDRLPKRPWDNSGKRFGSPEKARRELGFSADVSI 343 (377)
T ss_dssp HHHHHHHHHHHHHCCTTEEEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCCGGGCC-CCCCCCHHHHHHHCCCCCCCH
T ss_pred HHHHHHHHHHHHhcCCCCeEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCCccccccccccCHHHHHHHcCCCCCCCH
Confidence 999999 99999876545999999999999999999999999887665555322 234 678999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhh
Q 017290 323 KDGLRITYFWIKEQIEK 339 (374)
Q Consensus 323 ~~~l~~~~~~~~~~~~~ 339 (374)
+++|+++++|+++....
T Consensus 344 ~e~l~~~~~~~~~~~~~ 360 (377)
T 2q1s_A 344 DDGLRKTIEWTKANLAV 360 (377)
T ss_dssp HHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHhhhh
Confidence 99999999999987644
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=326.05 Aligned_cols=291 Identities=23% Similarity=0.336 Sum_probs=239.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc----ccccc----cccceeEEecccchhhHhhhccCCCEEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE----HMTED----MFCHEFHLVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~----~~~i~~~~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
++|+|||||||||||+++++.|+++|++|++++|++.. ..... ..+++++.+|+. ++|+|||
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi~ 75 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRLVYH 75 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEEEEE
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCEEEE
Confidence 57899999999999999999999999999999998762 11111 123444555543 8999999
Q ss_pred cccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhH
Q 017290 97 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEK 176 (374)
Q Consensus 97 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK 176 (374)
+|+.... .....++...+. |+.++.+++++|++.++++|||+||.++|+..... +++|++ +..|.+.|+.+|
T Consensus 76 ~a~~~~~-~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~----~~~E~~--~~~p~~~Y~~sK 147 (321)
T 3vps_A 76 LASHKSV-PRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTL----PTPEDS--PLSPRSPYAASK 147 (321)
T ss_dssp CCCCCCH-HHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSS----SBCTTS--CCCCCSHHHHHH
T ss_pred CCccCCh-HHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCC----CCCCCC--CCCCCChhHHHH
Confidence 9996541 123345556677 99999999999999999999999999999876432 578877 677899999999
Q ss_pred HHHHHHHHHHHhhhCC-cEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhh
Q 017290 177 LASEELCKHYTKDFGI-ECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255 (374)
Q Consensus 177 ~~~E~~~~~~~~~~~~-~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~ 255 (374)
..+|.+++.++.+.++ +++++||+.+||+.... ...+..++..... +..+.+++++++.++++|++|+|++++.+
T Consensus 148 ~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~Dva~~~~~~ 223 (321)
T 3vps_A 148 VGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERP---DALVPRLCANLLT-RNELPVEGDGEQRRDFTYITDVVDKLVAL 223 (321)
T ss_dssp HHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCT---TSHHHHHHHHHHH-HSEEEEETTSCCEECEEEHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHcCCCceEEEEeccccCcCCCC---CChHHHHHHHHHc-CCCeEEeCCCCceEceEEHHHHHHHHHHH
Confidence 9999999999988899 99999999999997642 3355566655554 56778888899999999999999999999
Q ss_pred hccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCC-CCCcccccchHHHHHhcCCCc-CCCHHHHHHHHHHHH
Q 017290 256 TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP-EGVRGRNSDNTLIKEKLGWAP-SMKLKDGLRITYFWI 333 (374)
Q Consensus 256 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-~~~~~~~~d~~k~~~~lg~~p-~~~~~~~l~~~~~~~ 333 (374)
++++..++||+++++.+++.|+++.+. .+|.+.++...+.. .......+|++|++++|||.| .++++++|+++++|+
T Consensus 224 ~~~~~~g~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~ 302 (321)
T 3vps_A 224 ANRPLPSVVNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPRPNEITEFRADTALQTRQIGERSGGIGIEEGIRLTLEWW 302 (321)
T ss_dssp GGSCCCSEEEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCCTTCCSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHHHHH
T ss_pred HhcCCCCeEEecCCCcccHHHHHHHHH-HhCCCCccccCCCCCCCcceeeccHHHHHHHhCCCCCcCCHHHHHHHHHHHH
Confidence 998754599999999999999999999 99998777666543 345677899999999999999 889999999999999
Q ss_pred HHhhh
Q 017290 334 KEQIE 338 (374)
Q Consensus 334 ~~~~~ 338 (374)
+++..
T Consensus 303 ~~~~~ 307 (321)
T 3vps_A 303 QSRDL 307 (321)
T ss_dssp HTSCT
T ss_pred HhCCC
Confidence 87643
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=326.23 Aligned_cols=297 Identities=24% Similarity=0.462 Sum_probs=240.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMG 102 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~ 102 (374)
++|+||||||+||||+++++.|+++|++|++++|+. .+|+.|.+.+.++++ ++|+|||+|+...
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~~ 67 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------ELNLLDSRAVHDFFASERIDQVYLAAAKVG 67 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------cCCccCHHHHHHHHHhcCCCEEEEcCeecC
Confidence 457999999999999999999999999999988762 268999999999998 9999999999653
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCC--CCCCC-CchHHhHHHH
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW--PAEPQ-DAYGLEKLAS 179 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~--~~~~~-~~y~~sK~~~ 179 (374)
.......++...+++|+.++.+++++|++.++++|||+||.++|+..... +++|+++. +..|. +.|+.+|..+
T Consensus 68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~----~~~E~~~~~~~~~p~~~~Y~~sK~~~ 143 (321)
T 1e6u_A 68 GIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQ----PMAESELLQGTLEPTNEPYAIAKIAG 143 (321)
T ss_dssp CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCS----SBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred CcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCC----CcCccccccCCCCCCCCccHHHHHHH
Confidence 21123345677889999999999999999999999999999999865322 46666521 23343 5899999999
Q ss_pred HHHHHHHHhhhCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhc---cC-CceEeeCCCcccccceeHHHHHHHHHh
Q 017290 180 EELCKHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALT---ST-DKFEMWGDGLQTRSFTFIDECVEGVLR 254 (374)
Q Consensus 180 E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~i~~~Dva~~i~~ 254 (374)
|.+++.++.+.+++++++||+.+||+...... ....+..++..... .+ .++.+++++++.++++|++|+|++++.
T Consensus 144 E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~ 223 (321)
T 1e6u_A 144 IKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIH 223 (321)
T ss_dssp HHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHH
Confidence 99999999888999999999999999764321 12455666665543 13 567778888999999999999999999
Q ss_pred hhccCC----------CCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCC-CCCCcccccchHHHHHhcCCCcCCCHH
Q 017290 255 LTKSDF----------REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPSMKLK 323 (374)
Q Consensus 255 ~~~~~~----------~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~d~~k~~~~lg~~p~~~~~ 323 (374)
+++++. +++||+++++++++.|+++.+.+.+|.+.++...+. +.......+|++|+++ |||+|.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~ 302 (321)
T 1e6u_A 224 VMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQ-LGWYHEISLE 302 (321)
T ss_dssp HHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBCCHHHHH-TTCCCCCCHH
T ss_pred HHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCCCCCcccccCCHHHHHh-cCCccCCcHH
Confidence 998763 489999999999999999999999998765544443 2234567899999999 9999999999
Q ss_pred HHHHHHHHHHHHhhhhh
Q 017290 324 DGLRITYFWIKEQIEKE 340 (374)
Q Consensus 324 ~~l~~~~~~~~~~~~~~ 340 (374)
++|+++++|++++.+..
T Consensus 303 ~~l~~~~~~~~~~~~~~ 319 (321)
T 1e6u_A 303 AGLASTYQWFLENQDRF 319 (321)
T ss_dssp HHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999876543
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=321.67 Aligned_cols=301 Identities=25% Similarity=0.362 Sum_probs=245.9
Q ss_pred CeEEEEcCcchhHHHHHHHHHhC---C---CEEEEEeCCCCcc--ccc----ccccceeEEecccchhhHhhhccCCCEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSE---G---HYIIASDWKKNEH--MTE----DMFCHEFHLVDLRVMDNCLKVTKGVDHV 94 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~---g---~~V~~~~r~~~~~--~~~----~~~~i~~~~~dl~~~~~~~~~~~~~d~v 94 (374)
|+||||||+||||++++++|+++ | ++|++++|..... ... ...+++++.+|++|.+.+.+++.++|+|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 80 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence 68999999999999999999997 8 9999999975311 111 1135788999999999999999999999
Q ss_pred EEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHH
Q 017290 95 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGL 174 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~ 174 (374)
||+|+.... .....+++..+++|+.++.+++++|.+.++++|||+||.++|+.... .+++|+. +..|.+.|+.
T Consensus 81 ih~A~~~~~-~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~----~~~~E~~--~~~~~~~Y~~ 153 (337)
T 1r6d_A 81 VHFAAESHV-DRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDS----GSWTESS--PLEPNSPYAA 153 (337)
T ss_dssp EECCSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSS----SCBCTTS--CCCCCSHHHH
T ss_pred EECCCccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCC----CCCCCCC--CCCCCCchHH
Confidence 999996431 11224566788999999999999999999999999999999986532 2577776 6678899999
Q ss_pred hHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHh
Q 017290 175 EKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 254 (374)
Q Consensus 175 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~ 254 (374)
+|..+|.+++.++.+.+++++++||+.+||+.... ...+..++..... +..+.+++++++.++++|++|+|++++.
T Consensus 154 sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 229 (337)
T 1r6d_A 154 SKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP---EKLIPLFVTNLLD-GGTLPLYGDGANVREWVHTDDHCRGIAL 229 (337)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT---TSHHHHHHHHHHT-TCCEEEETTSCCEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCC---CChHHHHHHHHhc-CCCcEEeCCCCeeEeeEeHHHHHHHHHH
Confidence 99999999999998889999999999999997531 2345556655544 5667777888889999999999999999
Q ss_pred hhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCC-cccCCC-CCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHH
Q 017290 255 LTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLP-IHHIPG-PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYF 331 (374)
Q Consensus 255 ~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~-~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~ 331 (374)
+++++ .+++||+++++++++.|+++.+.+.+|.+.+ +...+. +.......+|++|++++|||+|.++++++|+++++
T Consensus 230 ~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~ 309 (337)
T 1r6d_A 230 VLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVR 309 (337)
T ss_dssp HHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHH
T ss_pred HHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCCCCCCcceeecCHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence 99876 4779999999999999999999999998643 222222 11223456899999999999999999999999999
Q ss_pred HHHHhhh
Q 017290 332 WIKEQIE 338 (374)
Q Consensus 332 ~~~~~~~ 338 (374)
|+++...
T Consensus 310 ~~~~~~~ 316 (337)
T 1r6d_A 310 WYRENRG 316 (337)
T ss_dssp HHHHCHH
T ss_pred HHHhchh
Confidence 9987654
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-43 Score=322.20 Aligned_cols=303 Identities=23% Similarity=0.310 Sum_probs=243.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCcc--ccc----ccccceeEEecccchhhHhhhccCCCEEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEH--MTE----DMFCHEFHLVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~--~~~----~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
++|+||||||+||||+++++.|+++| ++|++++|..... ... ...+++++.+|++|.+.+.+++.++|+|||
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 81 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVH 81 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEE
Confidence 35789999999999999999999986 8999999875211 111 123578899999999999999999999999
Q ss_pred cccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCC-CeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHh
Q 017290 97 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV-KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLE 175 (374)
Q Consensus 97 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~s 175 (374)
+|+... ......++...+++|+.++.+++++|.+.+. ++|||+||.++|+.... .+++|++ +..|.+.|+.+
T Consensus 82 ~A~~~~-~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~----~~~~E~~--~~~~~~~Y~~s 154 (336)
T 2hun_A 82 LAAESH-VDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILK----GSFTEND--RLMPSSPYSAT 154 (336)
T ss_dssp CCCCCC-HHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSS----SCBCTTB--CCCCCSHHHHH
T ss_pred CCCCcC-hhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCC----CCcCCCC--CCCCCCccHHH
Confidence 999643 1122345667889999999999999998874 69999999999987532 2577776 66788999999
Q ss_pred HHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhh
Q 017290 176 KLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255 (374)
Q Consensus 176 K~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~ 255 (374)
|..+|.+++.++.+.+++++++||+.+||+.... ...+..++..... +..+.+++++.+.++++|++|+|++++.+
T Consensus 155 K~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 230 (336)
T 2hun_A 155 KAASDMLVLGWTRTYNLNASITRCTNNYGPYQFP---EKLIPKTIIRASL-GLKIPIYGTGKNVRDWLYVEDHVRAIELV 230 (336)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCT---TSHHHHHHHHHHT-TCCEEEETC---CEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCc---CchHHHHHHHHHc-CCCceEeCCCCceeeeEEHHHHHHHHHHH
Confidence 9999999999998889999999999999997531 2345556555543 56777778888899999999999999999
Q ss_pred hccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCC-cccCCC-CCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHH
Q 017290 256 TKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLP-IHHIPG-PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332 (374)
Q Consensus 256 ~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~-~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~ 332 (374)
++++ .+++||+++++.+++.|+++.+.+.+|.+.+ +...+. +.......+|++|++++|||.|.++++++|+++++|
T Consensus 231 ~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~ 310 (336)
T 2hun_A 231 LLKGESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVEDRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDW 310 (336)
T ss_dssp HHHCCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEECCCTTCCCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHHH
T ss_pred HhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccCCCCCchhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 8776 4779999999999999999999999998653 222222 222234578999999999999999999999999999
Q ss_pred HHHhhh
Q 017290 333 IKEQIE 338 (374)
Q Consensus 333 ~~~~~~ 338 (374)
+++...
T Consensus 311 ~~~~~~ 316 (336)
T 2hun_A 311 YLKNEW 316 (336)
T ss_dssp HHHTHH
T ss_pred HHhCcc
Confidence 988654
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-43 Score=326.02 Aligned_cols=306 Identities=21% Similarity=0.282 Sum_probs=243.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc------cccc-------ccccceeEEecccchhhHhhhcc--C
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE------HMTE-------DMFCHEFHLVDLRVMDNCLKVTK--G 90 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~-------~~~~i~~~~~dl~~~~~~~~~~~--~ 90 (374)
+|+||||||+||||+++++.|+++|++|++++|.... .... ...+++++.+|+++.+.+.++++ +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS 81 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence 5899999999999999999999999999999986543 1100 11356889999999999999988 8
Q ss_pred CCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCC-C
Q 017290 91 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP-Q 169 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~-~ 169 (374)
+|+|||+|+.... .....++...+++|+.++.+++++|++.++++|||+||.++|+.... .+++|++ +..| .
T Consensus 82 ~d~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~----~~~~E~~--~~~p~~ 154 (348)
T 1ek6_A 82 FMAVIHFAGLKAV-GESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQY----LPLDEAH--PTGGCT 154 (348)
T ss_dssp EEEEEECCSCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSS----SSBCTTS--CCCCCS
T ss_pred CCEEEECCCCcCc-cchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCC----CCcCCCC--CCCCCC
Confidence 9999999996431 11233556788999999999999999999999999999999986432 2577776 5556 7
Q ss_pred CchHHhHHHHHHHHHHHHhh-hCCcEEEEeeCcccCCCCCC------CC-CCCcHHHHHHHHhccCCceEeeC------C
Q 017290 170 DAYGLEKLASEELCKHYTKD-FGIECRVGRFHNIYGPFGTW------KG-MEKAPAAFCRKALTSTDKFEMWG------D 235 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~v~g~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~------~ 235 (374)
+.|+.+|..+|.+++.++.+ .+++++++||+.+||+.... .. ...++..++......+..+.+++ +
T Consensus 155 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 234 (348)
T 1ek6_A 155 NPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTED 234 (348)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSS
T ss_pred CchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCC
Confidence 89999999999999999876 23999999999999995311 00 12334444443332456677766 5
Q ss_pred CcccccceeHHHHHHHHHhhhccC---CC-CcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCC-CCcccccchHHH
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSD---FR-EPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE-GVRGRNSDNTLI 310 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~---~~-~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~d~~k~ 310 (374)
+++.++|+|++|+|++++.+++++ .+ ++||+++++.+++.|+++.+.+.+|.+.++...+... ......+|++|+
T Consensus 235 g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~ 314 (348)
T 1ek6_A 235 GTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLA 314 (348)
T ss_dssp SSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHH
T ss_pred CceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCCCccchhhccCHHHH
Confidence 678899999999999999998764 34 7999999999999999999999999887765555332 234567899999
Q ss_pred HHhcCCCcCCCHHHHHHHHHHHHHHhhh
Q 017290 311 KEKLGWAPSMKLKDGLRITYFWIKEQIE 338 (374)
Q Consensus 311 ~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 338 (374)
+++|||.|+++++++|+++++|++++..
T Consensus 315 ~~~lG~~p~~~l~~~l~~~~~w~~~~~~ 342 (348)
T 1ek6_A 315 QEELGWTAALGLDRMCEDLWRWQKQNPS 342 (348)
T ss_dssp HHTTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred HHhcCCCCCCCHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999987643
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=322.88 Aligned_cols=305 Identities=21% Similarity=0.309 Sum_probs=246.9
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhC--CCEEEEEeCCCCccc-----ccccccceeEEecccchhhHhhhccCCCEEEEcc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSE--GHYIIASDWKKNEHM-----TEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-----~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
||+||||||+||||+++++.|+++ |++|++++|+..... .....+++++.+|++|.+.+.++++++|+|||+|
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 83 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA 83 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence 689999999999999999999998 899999999753211 1112367889999999999999999999999999
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCccc--------ccccCCCCCCCCCCCCCC
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQL--------ETNVSLKESDAWPAEPQD 170 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~--------~~~~~~~e~~~~~~~~~~ 170 (374)
+.... .....+++..+++|+.++.+++++|.+.++ +|||+||.++|+..... +...+++|++ +..|.+
T Consensus 84 ~~~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~--~~~~~~ 159 (348)
T 1oc2_A 84 AESHN-DNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAET--NYNPSS 159 (348)
T ss_dssp SCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTS--CCCCCS
T ss_pred cccCc-cchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCC--CCCCCC
Confidence 96431 122345667889999999999999999888 99999999999864210 0113677776 667889
Q ss_pred chHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHH
Q 017290 171 AYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE 250 (374)
Q Consensus 171 ~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 250 (374)
.|+.+|..+|.+++.++.+.+++++++||+.+||+.... ...+..++..... +..+.+++++.+.++++|++|+|+
T Consensus 160 ~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~ 235 (348)
T 1oc2_A 160 PYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHI---EKFIPRQITNILA-GIKPKLYGEGKNVRDWIHTNDHST 235 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCT---TSHHHHHHHHHHH-TCCCEEETTSCCEEECEEHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCc---cchHHHHHHHHHc-CCCceEecCCCceEeeEEHHHHHH
Confidence 999999999999999998889999999999999997531 2345556655544 556677788888999999999999
Q ss_pred HHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCC-cccCCC-CCCCcccccchHHHHHhcCCCcCCC-HHHHH
Q 017290 251 GVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLP-IHHIPG-PEGVRGRNSDNTLIKEKLGWAPSMK-LKDGL 326 (374)
Q Consensus 251 ~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~-~~~~~~~~~d~~k~~~~lg~~p~~~-~~~~l 326 (374)
+++.+++++ .+++||+++++++++.|+++.+.+.+|.+.+ +...+. +.......+|++|++++|||.|+++ ++++|
T Consensus 236 ~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l 315 (348)
T 1oc2_A 236 GVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGL 315 (348)
T ss_dssp HHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHHH
T ss_pred HHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCCCCcccccccCHHHHHHHcCCCCCCCcHHHHH
Confidence 999999876 4779999999999999999999999998753 222222 2223445789999999999999988 99999
Q ss_pred HHHHHHHHHhhh
Q 017290 327 RITYFWIKEQIE 338 (374)
Q Consensus 327 ~~~~~~~~~~~~ 338 (374)
+++++|+++...
T Consensus 316 ~~~~~~~~~~~~ 327 (348)
T 1oc2_A 316 EETIQWYTDNQD 327 (348)
T ss_dssp HHHHHHHHHTHH
T ss_pred HHHHHHHHHhhh
Confidence 999999988654
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-43 Score=326.29 Aligned_cols=310 Identities=22% Similarity=0.311 Sum_probs=244.9
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-----c-ccccceeEEecccchhhHhhhccC--CCEEEEc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-----E-DMFCHEFHLVDLRVMDNCLKVTKG--VDHVFNL 97 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~-~~~~i~~~~~dl~~~~~~~~~~~~--~d~vi~~ 97 (374)
||+||||||+||||+++++.|++.|++|++++|....... . ...+++++.+|++|.+.+.+++++ +|+|||+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 80 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence 5799999999999999999999999999999986422110 0 112478899999999999999987 9999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeecccccCCCccccc------------ccCCCCCCCC
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASSACIYPEFKQLET------------NVSLKESDAW 164 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss~~vy~~~~~~~~------------~~~~~e~~~~ 164 (374)
|+.... .....++...+++|+.++.+++++|++.+++ +|||+||.++|+.....+. ..+++|+.
T Consensus 81 A~~~~~-~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~-- 157 (347)
T 1orr_A 81 AGQVAM-TTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDEST-- 157 (347)
T ss_dssp CCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTS--
T ss_pred CcccCh-hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccC--
Confidence 996431 1122356678899999999999999999886 9999999999986543210 01245555
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCC----ceEeeCCCcccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTD----KFEMWGDGLQTR 240 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 240 (374)
+..|.+.|+.+|..+|.+++.++.+.+++++++||+.+||+..........+..++...+.+.. ++.+++++++.+
T Consensus 158 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~ 237 (347)
T 1orr_A 158 QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVR 237 (347)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEE
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceE
Confidence 5567889999999999999999988899999999999999975322112345556555554332 677778899999
Q ss_pred cceeHHHHHHHHHhhhccC---CCCcEEecCCC--ccCHHHHHHHHHHhcCCCCCcccCCCC-CCCcccccchHHHHHhc
Q 017290 241 SFTFIDECVEGVLRLTKSD---FREPVNIGSDE--MVSMNEMAEIVLSFEDKKLPIHHIPGP-EGVRGRNSDNTLIKEKL 314 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~---~~~~~~i~~~~--~~s~~e~~~~i~~~~g~~~~~~~~~~~-~~~~~~~~d~~k~~~~l 314 (374)
+++|++|+|++++.++++. .+++||++++. ++++.|+++.+.+.+|.+.++...|.. .......+|++|++++|
T Consensus 238 ~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~l 317 (347)
T 1orr_A 238 DVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAI 317 (347)
T ss_dssp ECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSCCSEECBCCHHHHHHH
T ss_pred eeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCCCCCCcceeecCHHHHHHHH
Confidence 9999999999999998752 46799999886 599999999999999988766655532 22345678999999999
Q ss_pred CCCcCCCHHHHHHHHHHHHHHhhh
Q 017290 315 GWAPSMKLKDGLRITYFWIKEQIE 338 (374)
Q Consensus 315 g~~p~~~~~~~l~~~~~~~~~~~~ 338 (374)
||+|+++++++|+++++|+++.++
T Consensus 318 G~~p~~~~~e~l~~~~~~~~~~~~ 341 (347)
T 1orr_A 318 DWSPKVSAKDGVQKMYDWTSSILE 341 (347)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHC--
T ss_pred CCCccCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998765
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=326.79 Aligned_cols=310 Identities=18% Similarity=0.185 Sum_probs=245.4
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-----cc-------ccccceeEEecccchhhHhhhcc--CC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-----TE-------DMFCHEFHLVDLRVMDNCLKVTK--GV 91 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~-------~~~~i~~~~~dl~~~~~~~~~~~--~~ 91 (374)
||+||||||+||||+++++.|+++|++|++++|++.... .. ...+++++.+|+.|.+.+.++++ ++
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 103 (375)
T 1t2a_A 24 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 103 (375)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence 478999999999999999999999999999999865311 11 12357889999999999999887 47
Q ss_pred CEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCC---CeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV---KRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~---~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
|+|||||+.... .....++...+++|+.++.+++++|.+.++ ++|||+||.++|+.... .+++|++ +..|
T Consensus 104 d~vih~A~~~~~-~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~----~~~~E~~--~~~~ 176 (375)
T 1t2a_A 104 TEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQE----IPQKETT--PFYP 176 (375)
T ss_dssp SEEEECCSCCCH-HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSS----SSBCTTS--CCCC
T ss_pred CEEEECCCcccc-cccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCC----CCCCccC--CCCC
Confidence 999999996431 112245567788999999999999999987 79999999999986542 2577776 6678
Q ss_pred CCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHH
Q 017290 169 QDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 248 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 248 (374)
.+.|+.+|..+|.+++.++.+.+++++++|++.+|||..........+..++.....+......++++++.++++|++|+
T Consensus 177 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dv 256 (375)
T 1t2a_A 177 RSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 256 (375)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHH
Confidence 89999999999999999998889999999999999996431111122334444444443444556888899999999999
Q ss_pred HHHHHhhhccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcc------------------cC-C---CCCCCcccccc
Q 017290 249 VEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIH------------------HI-P---GPEGVRGRNSD 306 (374)
Q Consensus 249 a~~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~------------------~~-~---~~~~~~~~~~d 306 (374)
|++++.+++++.+++||+++++.+++.|+++.+.+.+|.+.++. .. + .+.......+|
T Consensus 257 a~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 336 (375)
T 1t2a_A 257 VEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGD 336 (375)
T ss_dssp HHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBC
T ss_pred HHHHHHHHhcCCCceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccchhhcCC
Confidence 99999999987789999999999999999999999999864321 01 1 11223446789
Q ss_pred hHHHHHhcCCCcCCCHHHHHHHHHHHHHHhhhhhhh
Q 017290 307 NTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKT 342 (374)
Q Consensus 307 ~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~~~ 342 (374)
++|++++|||+|+++++++|+++++|+++.....+.
T Consensus 337 ~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~ 372 (375)
T 1t2a_A 337 CTKAKQKLNWKPRVAFDELVREMVHADVELMRTNPN 372 (375)
T ss_dssp CHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHhcCCCccCCHHHHHHHHHHHHHHhhccCCC
Confidence 999999999999999999999999999988766543
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-42 Score=319.72 Aligned_cols=304 Identities=26% Similarity=0.422 Sum_probs=243.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhccCCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
+.+|+||||||+||||++|++.|++.|++|++++|........ ...+++++.+|+.+. .+.++|+|||+|
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~d~vih~A 99 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----LYIEVDQIYHLA 99 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----CCCCCSEEEECC
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh-----hhcCCCEEEECc
Confidence 3678999999999999999999999999999999975432111 123568888898764 356899999999
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCC---CCCCCCCchHHh
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDA---WPAEPQDAYGLE 175 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~---~~~~~~~~y~~s 175 (374)
+..... .+..++...+++|+.++.+++++|++.++ ++||+||.++|+..... +++|+.+ .+..|.+.|+.+
T Consensus 100 ~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~----~~~E~~~~~~~~~~~~~~Y~~s 173 (343)
T 2b69_A 100 SPASPP-NYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVH----PQSEDYWGHVNPIGPRACYDEG 173 (343)
T ss_dssp SCCSHH-HHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSS----SBCTTCCCBCCSSSTTHHHHHH
T ss_pred cccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCC----CCcccccccCCCCCCCCchHHH
Confidence 965311 12345567788999999999999999887 99999999999865422 4566532 144567789999
Q ss_pred HHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhh
Q 017290 176 KLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255 (374)
Q Consensus 176 K~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~ 255 (374)
|..+|.+++.++.+.+++++++||+.+||+..... ....+..++...+. +..+.+++++++.++++|++|+|++++.+
T Consensus 174 K~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~Dva~a~~~~ 251 (343)
T 2b69_A 174 KRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN-DGRVVSNFILQALQ-GEPLTVYGSGSQTRAFQYVSDLVNGLVAL 251 (343)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTT-CCCHHHHHHHHHHH-TCCEEEESSSCCEEECEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCC-cccHHHHHHHHHHc-CCCceEcCCCCeEEeeEeHHHHHHHHHHH
Confidence 99999999999888899999999999999975321 12345566666554 56677778888999999999999999999
Q ss_pred hccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCC-CCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHH
Q 017290 256 TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE-GVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIK 334 (374)
Q Consensus 256 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~ 334 (374)
++.+.+++||+++++++++.|+++.+.+.+|.+.++...|... ......+|++|++++|||.|.++++++|+++++|++
T Consensus 252 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~ 331 (343)
T 2b69_A 252 MNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFR 331 (343)
T ss_dssp HTSSCCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred HhcCCCCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCCCCCCceecCCHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 9887789999999999999999999999999887766555432 334567899999999999999999999999999999
Q ss_pred Hhhhhh
Q 017290 335 EQIEKE 340 (374)
Q Consensus 335 ~~~~~~ 340 (374)
+.....
T Consensus 332 ~~~~~~ 337 (343)
T 2b69_A 332 KELEYQ 337 (343)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 876543
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=322.74 Aligned_cols=306 Identities=20% Similarity=0.261 Sum_probs=242.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCCCCccccc-ccccceeEEecccch-hhHhhhccCCCEEEEcccccCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSE-GHYIIASDWKKNEHMTE-DMFCHEFHLVDLRVM-DNCLKVTKGVDHVFNLAADMGG 103 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~-~~~~i~~~~~dl~~~-~~~~~~~~~~d~vi~~a~~~~~ 103 (374)
|+||||||+||||++++++|+++ |++|++++|++...... ...+++++.+|+.+. +.+.++++++|+|||||+....
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~ 80 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP 80 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCc
Confidence 68999999999999999999998 89999999987653321 223678999999984 5678888899999999986431
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCC----C-CCCCCchHHhHHH
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----P-AEPQDAYGLEKLA 178 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~----~-~~~~~~y~~sK~~ 178 (374)
. ....+....+++|+.++.+++++|++.+ ++|||+||.++|+..... +++|+++. + ..|.+.|+.+|..
T Consensus 81 ~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~----~~~e~~~~~~~~~~~~~~~~Y~~sK~~ 154 (345)
T 2bll_A 81 I-EYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDK----YFDEDHSNLIVGPVNKPRWIYSVSKQL 154 (345)
T ss_dssp H-HHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCS----SBCTTTCCCBCCCTTCGGGHHHHHHHH
T ss_pred c-chhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCC----CcCCcccccccCcccCcccccHHHHHH
Confidence 1 1223556678899999999999999998 899999999999875422 45666521 1 1345689999999
Q ss_pred HHHHHHHHHhhhCCcEEEEeeCcccCCCCCCC-----CCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHH
Q 017290 179 SEELCKHYTKDFGIECRVGRFHNIYGPFGTWK-----GMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVL 253 (374)
Q Consensus 179 ~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~ 253 (374)
+|.+++.++.+.+++++++||+.+||+..... .....+..++..... +.++.+++++++.++++|++|+|++++
T Consensus 155 ~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~i~v~Dva~a~~ 233 (345)
T 2bll_A 155 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE-GSPIKLIDGGKQKRCFTDIRDGIEALY 233 (345)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHH-TCCEEEGGGSCCEEECEEHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHc-CCCcEEECCCCEEEEEEEHHHHHHHHH
Confidence 99999999988899999999999999975321 112345556655554 567777788888999999999999999
Q ss_pred hhhccC----CCCcEEecCCC-ccCHHHHHHHHHHhcCCCCCcccCCCCC----------------CCcccccchHHHHH
Q 017290 254 RLTKSD----FREPVNIGSDE-MVSMNEMAEIVLSFEDKKLPIHHIPGPE----------------GVRGRNSDNTLIKE 312 (374)
Q Consensus 254 ~~~~~~----~~~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~----------------~~~~~~~d~~k~~~ 312 (374)
.+++++ .+++||+++++ .+|+.|+++.+.+.+|.+......|... ......+|++|+++
T Consensus 234 ~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~ 313 (345)
T 2bll_A 234 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHR 313 (345)
T ss_dssp HHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHHH
T ss_pred HHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhcccHHHHHH
Confidence 999864 36799999986 8999999999999998765444443221 12456789999999
Q ss_pred hcCCCcCCCHHHHHHHHHHHHHHhhhh
Q 017290 313 KLGWAPSMKLKDGLRITYFWIKEQIEK 339 (374)
Q Consensus 313 ~lg~~p~~~~~~~l~~~~~~~~~~~~~ 339 (374)
+|||+|+++++++|+++++|+++..+.
T Consensus 314 ~lG~~p~~~l~~~l~~~~~~~~~~~~~ 340 (345)
T 2bll_A 314 CLDWEPKIDMQETIDETLDFFLRTVDL 340 (345)
T ss_dssp HHCCCCCCCHHHHHHHHHHHHHHHSCT
T ss_pred hcCCCccccHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999876543
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-43 Score=317.84 Aligned_cols=275 Identities=17% Similarity=0.159 Sum_probs=227.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccC-CCEEEEcccccCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKG-VDHVFNLAADMGG 103 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~-~d~vi~~a~~~~~ 103 (374)
+||+||||| +||||++|++.|+++|++|++++|++... ..+++++.+|+.|.+.+.+++++ +|+|||+|+..
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~-- 74 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAAS-- 74 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHH--
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCC--
Confidence 468999999 59999999999999999999999987653 24678999999999999999986 99999999853
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHH
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELC 183 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~ 183 (374)
..++...+++|+.++.+++++|++.++++|||+||.++|+..... +++|++ +..|.+.|+.+|..+|.+
T Consensus 75 ----~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~----~~~E~~--~~~p~~~Y~~sK~~~E~~- 143 (286)
T 3gpi_A 75 ----EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEE----WLDEDT--PPIAKDFSGKRMLEAEAL- 143 (286)
T ss_dssp ----HHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSS----EECTTS--CCCCCSHHHHHHHHHHHH-
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCC----CCCCCC--CCCCCChhhHHHHHHHHH-
Confidence 245667788999999999999999999999999999999876432 578877 678899999999999999
Q ss_pred HHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhcc----C
Q 017290 184 KHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS----D 259 (374)
Q Consensus 184 ~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~----~ 259 (374)
+.+ ++++++||+.+||+... .++..... . ..++.++..++++|++|+|++++.++++ .
T Consensus 144 ~~~-----~~~~ilR~~~v~G~~~~---------~~~~~~~~--~--~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~ 205 (286)
T 3gpi_A 144 LAA-----YSSTILRFSGIYGPGRL---------RMIRQAQT--P--EQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAV 205 (286)
T ss_dssp GGG-----SSEEEEEECEEEBTTBC---------HHHHHTTC--G--GGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSC
T ss_pred Hhc-----CCeEEEecccccCCCch---------hHHHHHHh--c--ccCCCcCceeEEEEHHHHHHHHHHHHhhhccCC
Confidence 653 89999999999999642 23333332 1 1236778899999999999999999987 3
Q ss_pred CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCCCcccccchHHHHHhcCCCcCC-CHHHHHHHHHHHHHHhhh
Q 017290 260 FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSM-KLKDGLRITYFWIKEQIE 338 (374)
Q Consensus 260 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~-~~~~~l~~~~~~~~~~~~ 338 (374)
.+++||+++++.+++.|+++.+.+.+|.+.++...+ .......+|++|++ +|||+|++ +++++|+++++|+.+...
T Consensus 206 ~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~--~~~~~~~~d~~k~~-~lG~~p~~~~l~e~l~~~~~~~~~~~~ 282 (286)
T 3gpi_A 206 PERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGATP--PVQGNKKLSNARLL-ASGYQLIYPDYVSGYGALLAAMREGHH 282 (286)
T ss_dssp CCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCCC--CBCSSCEECCHHHH-HTTCCCSSCSHHHHHHHHHHHHTC---
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCCc--ccCCCeEeeHHHHH-HcCCCCcCCcHHHHHHHHHHHHhcccc
Confidence 589999999999999999999999999987655443 44566789999998 89999999 699999999999987544
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=322.68 Aligned_cols=305 Identities=19% Similarity=0.223 Sum_probs=243.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-----cccceeEEecccchhhHhhhccC--CCEEEEc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-----MFCHEFHLVDLRVMDNCLKVTKG--VDHVFNL 97 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~i~~~~~dl~~~~~~~~~~~~--~d~vi~~ 97 (374)
.+|+||||||+||||++|++.|++.|++|++++|++....... ..+++++.+|+.+.+.+.+++++ +|+|||+
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 87 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 87 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEEC
Confidence 4589999999999999999999999999999999875433211 23578899999999999998875 8999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhH
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEK 176 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK 176 (374)
|+... ......++...+++|+.++.+++++|.+.+ +++|||+||.++|+.... ..+++|++ +..|.+.|+.+|
T Consensus 88 A~~~~-~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~---~~~~~E~~--~~~~~~~Y~~sK 161 (357)
T 1rkx_A 88 AAQPL-VRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEW---IWGYRENE--AMGGYDPYSNSK 161 (357)
T ss_dssp CSCCC-HHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCS---SSCBCTTS--CBCCSSHHHHHH
T ss_pred CCCcc-cccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCc---CCCCCCCC--CCCCCCccHHHH
Confidence 98532 112334566788999999999999999887 889999999999987542 12466766 556789999999
Q ss_pred HHHHHHHHHHHhhh---------CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHH
Q 017290 177 LASEELCKHYTKDF---------GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247 (374)
Q Consensus 177 ~~~E~~~~~~~~~~---------~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 247 (374)
..+|.+++.++.+. +++++++||+.+||++... ....+..++..... +..+.+ +.+++.++|+|++|
T Consensus 162 ~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~--~~~~~~~~~~~~~~-g~~~~~-~~~~~~~~~v~v~D 237 (357)
T 1rkx_A 162 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA--LDRIVPDILRAFEQ-SQPVII-RNPHAIRPWQHVLE 237 (357)
T ss_dssp HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC--SSCHHHHHHHHHHT-TCCEEC-SCTTCEECCEETHH
T ss_pred HHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCc--cccHHHHHHHHHhc-CCCEEE-CCCCCeeccEeHHH
Confidence 99999999998754 8999999999999997521 13456666665544 555555 45678899999999
Q ss_pred HHHHHHhhhcc------CCCCcEEecCC--CccCHHHHHHHHHHhcCCCCCcccCCC--CCCCcccccchHHHHHhcCCC
Q 017290 248 CVEGVLRLTKS------DFREPVNIGSD--EMVSMNEMAEIVLSFEDKKLPIHHIPG--PEGVRGRNSDNTLIKEKLGWA 317 (374)
Q Consensus 248 va~~i~~~~~~------~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~~~~~~~~--~~~~~~~~~d~~k~~~~lg~~ 317 (374)
+|++++.++++ ..+++||++++ +.+++.|+++.+.+.+|.+.++...+. +.......+|++|++++|||+
T Consensus 238 va~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 317 (357)
T 1rkx_A 238 PLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWH 317 (357)
T ss_dssp HHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHCCC
T ss_pred HHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCCCCcCcccccCCHHHHHHHhCCC
Confidence 99999998874 34789999974 689999999999999998766543332 223455689999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHhhhh
Q 017290 318 PSMKLKDGLRITYFWIKEQIEK 339 (374)
Q Consensus 318 p~~~~~~~l~~~~~~~~~~~~~ 339 (374)
|+++++++|+++++|++++...
T Consensus 318 p~~~l~e~l~~~~~~~~~~~~~ 339 (357)
T 1rkx_A 318 PRWNLNTTLEYIVGWHKNWLSG 339 (357)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTT
T ss_pred cCCcHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999876543
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-43 Score=320.63 Aligned_cols=297 Identities=17% Similarity=0.284 Sum_probs=237.2
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhC--CCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEccccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSE--GHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADM 101 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~ 101 (374)
+|+||||||+||||++++++|+++ |++|++++|++.... ...+++++.+|+.|.+.+.++++ ++|+|||+|+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~ 79 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD--VVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALL 79 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH--HHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc--ccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCccC
Confidence 478999999999999999999999 899999999865421 12356889999999999999998 899999999864
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHH
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEE 181 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~ 181 (374)
.. ....++...+++|+.++.+++++|++.++++|||+||.++|+.... ..+++|+. +..|.+.|+.+|..+|.
T Consensus 80 ~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~---~~~~~e~~--~~~~~~~Y~~sK~~~e~ 152 (312)
T 2yy7_A 80 SA--TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTP---KENTPQYT--IMEPSTVYGISKQAGER 152 (312)
T ss_dssp HH--HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSC---SSSBCSSC--BCCCCSHHHHHHHHHHH
T ss_pred CC--chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCC---CCCccccC--cCCCCchhHHHHHHHHH
Confidence 31 2234566788999999999999999999999999999999986432 11456665 56788999999999999
Q ss_pred HHHHHHhhhCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC
Q 017290 182 LCKHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 182 ~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~ 260 (374)
+++.++.+.+++++++||+.+||+...+.. ....+..++...+.. ..+.+++++++.++++|++|+|++++.+++++.
T Consensus 153 ~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 231 (312)
T 2yy7_A 153 WCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIAD-KKYECFLSSETKMPMMYMDDAIDATINIMKAPV 231 (312)
T ss_dssp HHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHT-SEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCG
T ss_pred HHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcC-CCeEEecCCCceeeeeeHHHHHHHHHHHHhCcc
Confidence 999998888999999999999997643221 112233444444443 456667788889999999999999999998753
Q ss_pred -----CCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCC----CCcccccchHHHHHhcCCCcCCCHHHHHHHHHH
Q 017290 261 -----REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE----GVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYF 331 (374)
Q Consensus 261 -----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~ 331 (374)
+++||+++ +.+++.|+++.+.+.+|. ..+...|... ......+|++|++++|||+|+++++++|+++++
T Consensus 232 ~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~ 309 (312)
T 2yy7_A 232 EKIKIHSSYNLAA-MSFTPTEIANEIKKHIPE-FTITYEPDFRQKIADSWPASIDDSQAREDWDWKHTFDLESMTKDMIE 309 (312)
T ss_dssp GGCCCSSCEECCS-EEECHHHHHHHHHTTCTT-CEEEECCCTHHHHHTTSCSSBCCHHHHHHHCCCCCCCHHHHHHHHHH
T ss_pred cccccCceEEeCC-CccCHHHHHHHHHHHCCC-CceEeccCccccccccccccCCHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence 38999996 899999999999999983 2222223210 112357899999999999999999999999999
Q ss_pred HHH
Q 017290 332 WIK 334 (374)
Q Consensus 332 ~~~ 334 (374)
|++
T Consensus 310 ~~k 312 (312)
T 2yy7_A 310 HLS 312 (312)
T ss_dssp HHC
T ss_pred HhC
Confidence 984
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-42 Score=325.64 Aligned_cols=309 Identities=18% Similarity=0.278 Sum_probs=244.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHH-hCCCEEEEEeCCCCcc--------cccc------------ccc---ceeEEecccch
Q 017290 26 KLRISVTGAGGFIASHIARRLK-SEGHYIIASDWKKNEH--------MTED------------MFC---HEFHLVDLRVM 81 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~--------~~~~------------~~~---i~~~~~dl~~~ 81 (374)
+|+||||||+||||+++++.|+ +.|++|++++|+.... .... ..+ ++++.+|+++.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4799999999999999999999 9999999999876432 1000 113 78899999999
Q ss_pred hhHhhhcc--C-CCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcc---cccc
Q 017290 82 DNCLKVTK--G-VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQ---LETN 155 (374)
Q Consensus 82 ~~~~~~~~--~-~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~---~~~~ 155 (374)
+.+.++++ + +|+|||+|+..... ....+.+..+++|+.++.+++++|++.++++|||+||.++|+.... .+..
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~-~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~ 160 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVG-ESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA 160 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcC-cchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccc
Confidence 99998887 6 99999999965311 1234566788999999999999999999999999999999986431 0012
Q ss_pred cCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCC------CCCCcHHHHH----HHHhc
Q 017290 156 VSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWK------GMEKAPAAFC----RKALT 225 (374)
Q Consensus 156 ~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~------~~~~~~~~~~----~~~~~ 225 (374)
.+++|++ +..|.+.|+.+|..+|.+++.++.+.+++++++||+.+||+..... ....++..++ .....
T Consensus 161 ~~~~E~~--~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
T 1gy8_A 161 EPIDINA--KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAP 238 (397)
T ss_dssp CCBCTTS--CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSC
T ss_pred cCcCccC--CCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHh
Confidence 3677877 5678899999999999999999988899999999999999964210 0123344333 13333
Q ss_pred cC-----------CceEeeC------CCcccccceeHHHHHHHHHhhhccC--CC--------CcEEecCCCccCHHHHH
Q 017290 226 ST-----------DKFEMWG------DGLQTRSFTFIDECVEGVLRLTKSD--FR--------EPVNIGSDEMVSMNEMA 278 (374)
Q Consensus 226 ~~-----------~~~~~~~------~~~~~~~~i~~~Dva~~i~~~~~~~--~~--------~~~~i~~~~~~s~~e~~ 278 (374)
+. ..+.+++ ++++.++|+|++|+|++++.+++++ .+ ++||+++++++++.|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~ 318 (397)
T 1gy8_A 239 DQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVI 318 (397)
T ss_dssp C-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHH
T ss_pred cCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHH
Confidence 32 2566776 6778899999999999999998763 23 79999999999999999
Q ss_pred HHHHHhcCCCCCcccCCCC-CCCcccccchHHHHHhcCCCcCC-CHHHHHHHHHHHHHHhh
Q 017290 279 EIVLSFEDKKLPIHHIPGP-EGVRGRNSDNTLIKEKLGWAPSM-KLKDGLRITYFWIKEQI 337 (374)
Q Consensus 279 ~~i~~~~g~~~~~~~~~~~-~~~~~~~~d~~k~~~~lg~~p~~-~~~~~l~~~~~~~~~~~ 337 (374)
+.+.+.+|.+.++...+.. .......+|++|++++|||.|.+ +++++|+++++|++++.
T Consensus 319 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~~ 379 (397)
T 1gy8_A 319 EVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHP 379 (397)
T ss_dssp HHHHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCT
T ss_pred HHHHHHhCCCCCeeeCCCCCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhcc
Confidence 9999999988776655532 23445788999999999999998 99999999999998754
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-42 Score=321.47 Aligned_cols=309 Identities=20% Similarity=0.211 Sum_probs=242.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-----cc------ccccceeEEecccchhhHhhhcc--CCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-----TE------DMFCHEFHLVDLRVMDNCLKVTK--GVD 92 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~------~~~~i~~~~~dl~~~~~~~~~~~--~~d 92 (374)
||+||||||+||||+++++.|+++|++|++++|++.... .. ...+++++.+|+++.+.+.++++ ++|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 589999999999999999999999999999999865310 00 01356788999999999998887 479
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCC---CeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV---KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~---~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
+|||+|+.... .....+....+++|+.++.+++++|++.++ ++|||+||.++|+.... .+++|++ +..|.
T Consensus 81 ~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~----~~~~E~~--~~~~~ 153 (372)
T 1db3_A 81 EVYNLGAMSHV-AVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQE----IPQKETT--PFYPR 153 (372)
T ss_dssp EEEECCCCCTT-TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCS----SSBCTTS--CCCCC
T ss_pred EEEECCcccCc-cccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCC----CCCCccC--CCCCC
Confidence 99999996532 122344556788999999999999999987 79999999999986542 2577776 66788
Q ss_pred CchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHH
Q 017290 170 DAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 249 (374)
+.|+.+|..+|.+++.++.+.+++++++|++.+|||..........+..++.....+......++++++.++++|++|+|
T Consensus 154 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva 233 (372)
T 1db3_A 154 SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYV 233 (372)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHH
Confidence 99999999999999999988899999999999999964321111223444444444333445568888999999999999
Q ss_pred HHHHhhhccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCccc-----------------------------CC---CC
Q 017290 250 EGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHH-----------------------------IP---GP 297 (374)
Q Consensus 250 ~~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~-----------------------------~~---~~ 297 (374)
++++.+++++.+++||+++++.+++.|+++.+.+.+|.+.++.. .+ .+
T Consensus 234 ~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (372)
T 1db3_A 234 KMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRP 313 (372)
T ss_dssp HHHHHTTSSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCC
T ss_pred HHHHHHHhcCCCceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeeccccccCC
Confidence 99999998877799999999999999999999999987543211 01 11
Q ss_pred CCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHHHhhhhhh
Q 017290 298 EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 341 (374)
Q Consensus 298 ~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~~ 341 (374)
.......+|++|++++|||+|+++++++|+++++|+++......
T Consensus 314 ~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~ 357 (372)
T 1db3_A 314 AEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHS 357 (372)
T ss_dssp CC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHhhhccc
Confidence 12234567999999999999999999999999999998875543
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-42 Score=318.70 Aligned_cols=309 Identities=17% Similarity=0.206 Sum_probs=244.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc--CCCEEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK--GVDHVFN 96 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~ 96 (374)
++|+||||||+||||+++++.|+++|++|++++|++...... ...+++++.+|++|.+.+.++++ ++|+|||
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 81 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN 81 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 458999999999999999999999999999999987643210 11257888999999999999887 4799999
Q ss_pred cccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCC-CeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHh
Q 017290 97 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV-KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLE 175 (374)
Q Consensus 97 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~s 175 (374)
+|+... ......+.+..+++|+.++.+++++|.+.++ ++|||+||.++|+..... +++|+. +..|.+.|+.+
T Consensus 82 ~A~~~~-~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~----~~~e~~--~~~~~~~Y~~s 154 (345)
T 2z1m_A 82 LAAQSF-VGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEI----PQTEKT--PFYPRSPYAVA 154 (345)
T ss_dssp CCCCCC-HHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSS----SBCTTS--CCCCCSHHHHH
T ss_pred CCCCcc-hhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCC----CCCccC--CCCCCChhHHH
Confidence 999643 1122445677889999999999999999886 799999999999875432 567776 56788999999
Q ss_pred HHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhh
Q 017290 176 KLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255 (374)
Q Consensus 176 K~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~ 255 (374)
|..+|.+++.++.+.+++++++|+.++|||+.........+..++.....+......++++.+.++++|++|+|++++.+
T Consensus 155 K~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~ 234 (345)
T 2z1m_A 155 KLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLM 234 (345)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHH
Confidence 99999999999988899999999999999975322111112333444344333344567778889999999999999999
Q ss_pred hccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCccc------------------C-C---CCCCCcccccchHHHHHh
Q 017290 256 TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHH------------------I-P---GPEGVRGRNSDNTLIKEK 313 (374)
Q Consensus 256 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~------------------~-~---~~~~~~~~~~d~~k~~~~ 313 (374)
++++.+++||+++++.+++.|+++.+.+.+|.+.++.. . + .+.......+|++|++++
T Consensus 235 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 314 (345)
T 2z1m_A 235 MQQPEPDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMKK 314 (345)
T ss_dssp HTSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHH
T ss_pred HhCCCCceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecCHHHHHHH
Confidence 98877799999999999999999999999998743210 0 0 112234456799999999
Q ss_pred cCCCcCCCHHHHHHHHHHHHHHhhhhh
Q 017290 314 LGWAPSMKLKDGLRITYFWIKEQIEKE 340 (374)
Q Consensus 314 lg~~p~~~~~~~l~~~~~~~~~~~~~~ 340 (374)
|||+|+++++++|+++++|+++.....
T Consensus 315 lG~~p~~~~~~~l~~~~~~~~~~~~~~ 341 (345)
T 2z1m_A 315 LGWKPRTTFDELVEIMMEADLKRVRDR 341 (345)
T ss_dssp HCCCCCSCHHHHHHHHHHHHHHHHHC-
T ss_pred cCCcccCCHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999876543
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-42 Score=316.54 Aligned_cols=292 Identities=16% Similarity=0.177 Sum_probs=231.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGM 104 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~ 104 (374)
++|+||||||+||||+++++.|+++|++|++++|++.........+++++.+|++|.+.+.++++++|+|||+|+...
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~-- 89 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYP-- 89 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC-------
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCc--
Confidence 457999999999999999999999999999999987654333333678999999999999999999999999999643
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCC----CCchHHhHHHHH
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP----QDAYGLEKLASE 180 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~----~~~y~~sK~~~E 180 (374)
.+..+....+++|+.++.+++++|++.++++|||+||.++|+..... . ..+|++ +..| .+.|+.+|..+|
T Consensus 90 -~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~--~-~~~E~~--~~~p~~~~~~~Y~~sK~~~e 163 (342)
T 2x4g_A 90 -SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQG--L-PGHEGL--FYDSLPSGKSSYVLCKWALD 163 (342)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTS--S-CBCTTC--CCSSCCTTSCHHHHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCC--C-CCCCCC--CCCccccccChHHHHHHHHH
Confidence 33456677899999999999999999999999999999999865421 0 126665 5567 789999999999
Q ss_pred HHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC
Q 017290 181 ELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 181 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~ 260 (374)
.+++.++.. +++++++||+.+||+.... . . +..++..... +....+ +++.++++|++|+|++++.+++++.
T Consensus 164 ~~~~~~~~~-g~~~~ilrp~~v~g~~~~~--~-~-~~~~~~~~~~-~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~ 234 (342)
T 2x4g_A 164 EQAREQARN-GLPVVIGIPGMVLGELDIG--P-T-TGRVITAIGN-GEMTHY---VAGQRNVIDAAEAGRGLLMALERGR 234 (342)
T ss_dssp HHHHHHHHT-TCCEEEEEECEEECSCCSS--C-S-TTHHHHHHHT-TCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSC
T ss_pred HHHHHHhhc-CCcEEEEeCCceECCCCcc--c-c-HHHHHHHHHc-CCCccc---cCCCcceeeHHHHHHHHHHHHhCCC
Confidence 999999876 9999999999999997521 1 1 3345554443 444444 4578899999999999999998764
Q ss_pred -CCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCC------------------------C----CCcccccchHHHH
Q 017290 261 -REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP------------------------E----GVRGRNSDNTLIK 311 (374)
Q Consensus 261 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------------------------~----~~~~~~~d~~k~~ 311 (374)
+++||+++++ +++.|+++.+.+.+|.+.++ .+|.. . ......+|++|++
T Consensus 235 ~g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~ 312 (342)
T 2x4g_A 235 IGERYLLTGHN-LEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAR 312 (342)
T ss_dssp TTCEEEECCEE-EEHHHHHHHHHHHHTCCCCE-EECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHH
T ss_pred CCceEEEcCCc-ccHHHHHHHHHHHhCCCCCC-cCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHH
Confidence 7899999999 99999999999999987664 33321 0 0235678999999
Q ss_pred HhcCC-CcCCCHHHHHHHHHHHHHHh
Q 017290 312 EKLGW-APSMKLKDGLRITYFWIKEQ 336 (374)
Q Consensus 312 ~~lg~-~p~~~~~~~l~~~~~~~~~~ 336 (374)
++||| .| ++++++|+++++|++++
T Consensus 313 ~~lG~~~p-~~~~~~l~~~~~~~~~~ 337 (342)
T 2x4g_A 313 EELGFFST-TALDDTLLRAIDWFRDN 337 (342)
T ss_dssp HHHCCCCC-SCHHHHHHHHHHHHHHT
T ss_pred HhCCCCCC-CCHHHHHHHHHHHHHHc
Confidence 99999 99 89999999999999864
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-42 Score=318.95 Aligned_cols=298 Identities=21% Similarity=0.310 Sum_probs=238.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-----CCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-----GVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-----~~d~vi~~a 98 (374)
.+|+||||||+||||++|++.|+++| ++|++++|++.........++. +.+|+++.+.+..+++ ++|+|||+|
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A 123 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEG 123 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCce-EeeecCcHHHHHHHHhhcccCCCCEEEECC
Confidence 45889999999999999999999999 9999999986542111111233 6789999888888886 599999999
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHH
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA 178 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~ 178 (374)
+.... +..+.+..+++|+.++.+++++|.+.++ +|||+||.++|+.... .+++|++ +..|.+.|+.+|..
T Consensus 124 ~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~----~~~~E~~--~~~p~~~Y~~sK~~ 193 (357)
T 2x6t_A 124 ACSST---TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTS----DFIESRE--YEKPLNVFGYSKFL 193 (357)
T ss_dssp SCCCT---TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSS----CCCSSGG--GCCCSSHHHHHHHH
T ss_pred cccCC---ccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCC----CCcCCcC--CCCCCChhHHHHHH
Confidence 97542 3445677889999999999999999999 9999999999986542 2577776 66788999999999
Q ss_pred HHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEeeCCCcc-cccceeHHHHHHHHHhhh
Q 017290 179 SEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGLQ-TRSFTFIDECVEGVLRLT 256 (374)
Q Consensus 179 ~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~i~~~~ 256 (374)
+|.+++.++.+.+++++++||+.+||+...... ....+..++..... +..+.+++++.+ .++++|++|+|++++.++
T Consensus 194 ~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~ 272 (357)
T 2x6t_A 194 FDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNN-GESPKLFEGSENFKRDFVYVGDVADVNLWFL 272 (357)
T ss_dssp HHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHT-TCCCEEETTGGGCEECEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHc-CCCcEEeCCCCcceEccEEHHHHHHHHHHHH
Confidence 999999999888999999999999999753211 12455556555444 566677788888 899999999999999999
Q ss_pred ccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCC-----CcccccchHHHHHhcCC-CcCCCHHHHHHHHH
Q 017290 257 KSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-----VRGRNSDNTLIKEKLGW-APSMKLKDGLRITY 330 (374)
Q Consensus 257 ~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-----~~~~~~d~~k~~~~lg~-~p~~~~~~~l~~~~ 330 (374)
+++.+++||+++++.+++.|+++.+.+.+|.+ ++...+.+.. .....+|++|+++ ||| .|.++++++|++++
T Consensus 273 ~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~~~~~~l~e~l~~~~ 350 (357)
T 2x6t_A 273 ENGVSGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDKLKGRYQAFTQADLTNLRA-AGYDKPFKTVAEGVTEYM 350 (357)
T ss_dssp HHCCCEEEEESCSCCEEHHHHHHHHHHHHTCC-CCEEECCCGGGTTSCCSBCCCCCHHHHH-TTCCCCCCCHHHHHHHHH
T ss_pred hcCCCCeEEecCCCcccHHHHHHHHHHHcCCC-CceecCCCcccccccccccccCHHHHHH-cCCCCCCCCHHHHHHHHH
Confidence 87668999999999999999999999999987 3333333321 2345678999986 999 78899999999999
Q ss_pred HHHHHh
Q 017290 331 FWIKEQ 336 (374)
Q Consensus 331 ~~~~~~ 336 (374)
+|++++
T Consensus 351 ~~~~~~ 356 (357)
T 2x6t_A 351 AWLNRD 356 (357)
T ss_dssp HHHC--
T ss_pred HHHhhc
Confidence 999754
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=315.81 Aligned_cols=295 Identities=21% Similarity=0.323 Sum_probs=219.1
Q ss_pred eEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcccccccccceeEEecccchhhHhhhccC-----CCEEEEccccc
Q 017290 28 RISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKG-----VDHVFNLAADM 101 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~-----~d~vi~~a~~~ 101 (374)
+||||||+||||+++++.|+++| ++|++++|++.........++. +.+|+++.+.+..++++ +|+|||+|+..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~~ 79 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS 79 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCcce-eccccccHHHHHHHHhccccCCCcEEEECcccc
Confidence 58999999999999999999999 9999999986543111111234 67899998888888875 99999999975
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHH
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEE 181 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~ 181 (374)
.. +..+.+..+++|+.++.+++++|++.++ +|||+||.++|+..... +++|++ +..|.+.|+.+|..+|.
T Consensus 80 ~~---~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~----~~~E~~--~~~p~~~Y~~sK~~~e~ 149 (310)
T 1eq2_A 80 ST---TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSD----FIESRE--YEKPLNVYGYSKFLFDE 149 (310)
T ss_dssp CT---TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSC----BCSSGG--GCCCSSHHHHHHHHHHH
T ss_pred cC---cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCC----CCCCCC--CCCCCChhHHHHHHHHH
Confidence 42 3445677889999999999999999999 99999999999875422 467776 66788999999999999
Q ss_pred HHHHHHhhhCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEeeCCCcc-cccceeHHHHHHHHHhhhccC
Q 017290 182 LCKHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGLQ-TRSFTFIDECVEGVLRLTKSD 259 (374)
Q Consensus 182 ~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~i~~~~~~~ 259 (374)
+++.++.+.+++++++||+.+||+...... ....+..++.... .+..+.+++++.+ .++++|++|+|++++.+++++
T Consensus 150 ~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~ 228 (310)
T 1eq2_A 150 YVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLN-NGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG 228 (310)
T ss_dssp HHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHH-C-------------CBCEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHH-cCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcC
Confidence 999998888999999999999999753211 1234555655544 3556667778888 899999999999999999876
Q ss_pred CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCC-----CcccccchHHHHHhcCC-CcCCCHHHHHHHHHHHH
Q 017290 260 FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-----VRGRNSDNTLIKEKLGW-APSMKLKDGLRITYFWI 333 (374)
Q Consensus 260 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-----~~~~~~d~~k~~~~lg~-~p~~~~~~~l~~~~~~~ 333 (374)
.+++||+++++.+++.|+++.+.+.+|.+ ++...+.+.. ......|++|+++ ||| .|.++++++|+++++|+
T Consensus 229 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~~~~~~l~~~l~~~~~~~ 306 (310)
T 1eq2_A 229 VSGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDKLKGRYQAFTQADLTNLRA-AGYDKPFKTVAEGVTEYMAWL 306 (310)
T ss_dssp CCEEEEESCSCCBCHHHHHHHC----------------------CCCSCCBCCHHHHH-TTCCCCCCCHHHHHHHHHHHT
T ss_pred CCCeEEEeCCCccCHHHHHHHHHHHcCCC-CceeCCCChhhhcccccccccchHHHHh-cCCCCCCCCHHHHHHHHHHHH
Confidence 68999999999999999999999999886 3333333221 2345678899986 999 78899999999999998
Q ss_pred HHh
Q 017290 334 KEQ 336 (374)
Q Consensus 334 ~~~ 336 (374)
+++
T Consensus 307 ~~~ 309 (310)
T 1eq2_A 307 NRD 309 (310)
T ss_dssp C--
T ss_pred Hhc
Confidence 764
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=313.67 Aligned_cols=304 Identities=22% Similarity=0.283 Sum_probs=236.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc--CCCEEEEc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNL 97 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~ 97 (374)
|+||||||+||||++++++|+++|++|++++|........ ...++.++.+|+++.+.+.++++ ++|+|||+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~ 80 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence 5899999999999999999999999999998754321111 01246788999999999988886 59999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCC-CCchHHhH
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP-QDAYGLEK 176 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~-~~~y~~sK 176 (374)
|+.... .....++...+++|+.++.++++++++.++++|||+||.++|+.... .+++|+. +..| .+.|+.+|
T Consensus 81 A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~----~~~~e~~--~~~~~~~~Y~~sK 153 (338)
T 1udb_A 81 AGLKAV-GESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPK----IPYVESF--PTGTPQSPYGKSK 153 (338)
T ss_dssp CSCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCS----SSBCTTS--CCCCCSSHHHHHH
T ss_pred CccCcc-ccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCC----CCcCccc--CCCCCCChHHHHH
Confidence 986431 11223455678899999999999999999899999999999986432 2566765 4434 78999999
Q ss_pred HHHHHHHHHHHhhh-CCcEEEEeeCcccCCCCCC------CC-CCCcHHHHHHHHhccCCceEeeC------CCcccccc
Q 017290 177 LASEELCKHYTKDF-GIECRVGRFHNIYGPFGTW------KG-MEKAPAAFCRKALTSTDKFEMWG------DGLQTRSF 242 (374)
Q Consensus 177 ~~~E~~~~~~~~~~-~~~~~ilR~~~v~g~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 242 (374)
..+|.+++.++.+. +++++++||+++||+.... .. ...++..++......+..+.+++ ++.+.++|
T Consensus 154 ~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~ 233 (338)
T 1udb_A 154 LMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY 233 (338)
T ss_dssp HHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECE
T ss_pred HHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeee
Confidence 99999999998776 7999999999999985311 00 12233333333332345566654 46678999
Q ss_pred eeHHHHHHHHHhhhccC---C-CCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCC-CCcccccchHHHHHhcCCC
Q 017290 243 TFIDECVEGVLRLTKSD---F-REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE-GVRGRNSDNTLIKEKLGWA 317 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~---~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~d~~k~~~~lg~~ 317 (374)
+|++|+|++++.++++. . +++||+++++.+++.|+++.+.+.+|.+.+....+... ......+|++|++++|||.
T Consensus 234 i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 313 (338)
T 1udb_A 234 IHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWR 313 (338)
T ss_dssp EEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECCCTTCCSBCCBCCHHHHHHHCCC
T ss_pred EEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCCCCCchhhhhcCHHHHHHHcCCC
Confidence 99999999999988752 2 36899999999999999999999999877665554332 2345678999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHhh
Q 017290 318 PSMKLKDGLRITYFWIKEQI 337 (374)
Q Consensus 318 p~~~~~~~l~~~~~~~~~~~ 337 (374)
|+++++++|+++++|++++.
T Consensus 314 p~~~l~~~l~~~~~w~~~~~ 333 (338)
T 1udb_A 314 VTRTLDEMAQDTWHWQSRHP 333 (338)
T ss_dssp CCCCHHHHHHHHHHHHHHCT
T ss_pred cCCCHHHHHHHHHHHHHhcc
Confidence 99999999999999998754
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-42 Score=321.18 Aligned_cols=307 Identities=17% Similarity=0.181 Sum_probs=244.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcc-----cccc------cc-cceeEEecccchhhHhhhccC--CC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH-----MTED------MF-CHEFHLVDLRVMDNCLKVTKG--VD 92 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~------~~-~i~~~~~dl~~~~~~~~~~~~--~d 92 (374)
|+||||||+||||+++++.|++.|++|++++|+.... .... .. +++++.+|+.|.+.+.+++++ +|
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 108 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 108 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence 7899999999999999999999999999999986541 1110 11 578899999999999988874 79
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-----eEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-----RFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-----~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
+|||+|+.... .....+....+++|+.++.+++++|.+.+++ +|||+||.++|+.... +++|++ +..
T Consensus 109 ~Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-----~~~E~~--~~~ 180 (381)
T 1n7h_A 109 EVYNLAAQSHV-AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-----PQSETT--PFH 180 (381)
T ss_dssp EEEECCSCCCH-HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-----SBCTTS--CCC
T ss_pred EEEECCcccCc-cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-----CCCCCC--CCC
Confidence 99999996431 1123456677899999999999999987765 9999999999987543 577776 667
Q ss_pred CCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHH
Q 017290 168 PQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 247 (374)
|.+.|+.+|..+|.+++.++.+.+++++++|++++|||+.........+..++.....+......++++++.++++|++|
T Consensus 181 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~D 260 (381)
T 1n7h_A 181 PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGD 260 (381)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHH
Confidence 88999999999999999999888999999999999999753211111233344444443334445688888999999999
Q ss_pred HHHHHHhhhccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCC--cccCC---CCCCCcccccchHHHHHhcCCCcCCCH
Q 017290 248 CVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLP--IHHIP---GPEGVRGRNSDNTLIKEKLGWAPSMKL 322 (374)
Q Consensus 248 va~~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~---~~~~~~~~~~d~~k~~~~lg~~p~~~~ 322 (374)
+|++++.+++++.+++||+++++.+++.|+++.+.+.+|.+.+ +...+ .+.......+|++|++++|||+|.+++
T Consensus 261 va~a~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l 340 (381)
T 1n7h_A 261 YVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGF 340 (381)
T ss_dssp HHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCH
T ss_pred HHHHHHHHHhCCCCCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccCCccccccccCCHHHHHHhcCCcccCCH
Confidence 9999999999887899999999999999999999999997632 11111 122334567899999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhh
Q 017290 323 KDGLRITYFWIKEQIEKEK 341 (374)
Q Consensus 323 ~~~l~~~~~~~~~~~~~~~ 341 (374)
+++|+++++|+.+.....+
T Consensus 341 ~e~l~~~~~~~~~~~~~~~ 359 (381)
T 1n7h_A 341 EKLVKMMVDEDLELAKREK 359 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccccc
Confidence 9999999999999876654
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=316.40 Aligned_cols=305 Identities=21% Similarity=0.331 Sum_probs=243.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCCCCc--cccc----ccccceeEEecccchhhHhhhcc--CCCEEEEc
Q 017290 27 LRISVTGAGGFIASHIARRLKSE-GHYIIASDWKKNE--HMTE----DMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNL 97 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~--~~~~----~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~ 97 (374)
|+||||||+||||+++++.|++. |++|++++|+... .... ...+++++.+|++|.+.+.++++ ++|+|||+
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence 57999999999999999999998 7999999987521 1111 12357889999999999999998 99999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhC--CCC-------eEEEeecccccCCCccc------ccccCCCCCC
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRIS--GVK-------RFFYASSACIYPEFKQL------ETNVSLKESD 162 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~-------~~i~~Ss~~vy~~~~~~------~~~~~~~e~~ 162 (374)
|+... ......+++..+++|+.++.+++++|.+. +++ +|||+||.++|+..... ....+++|+.
T Consensus 81 A~~~~-~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~ 159 (361)
T 1kew_A 81 AAESH-VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT 159 (361)
T ss_dssp CSCCC-HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred CCCcC-hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCC
Confidence 99643 11223456678899999999999999998 887 99999999999864310 0001467776
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (374)
+..|.+.|+.+|..+|.+++.++.+.+++++++||+.+||+.... ...+..++..... +..+.+++++.+.+++
T Consensus 160 --~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 233 (361)
T 1kew_A 160 --AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP---EKLIPLVILNALE-GKPLPIYGKGDQIRDW 233 (361)
T ss_dssp --CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT---TSHHHHHHHHHHH-TCCEEEETTSCCEEEE
T ss_pred --CCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCc---ccHHHHHHHHHHc-CCCceEcCCCceeEee
Confidence 567889999999999999999998889999999999999997531 2345555555544 5667777888889999
Q ss_pred eeHHHHHHHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcc--------cCCC-CCCCcccccchHHHHH
Q 017290 243 TFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIH--------HIPG-PEGVRGRNSDNTLIKE 312 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~--------~~~~-~~~~~~~~~d~~k~~~ 312 (374)
+|++|+|++++.+++++ .+++||+++++.+++.|+++.+.+.+|.+.+.. ..+. +.......+|++|+++
T Consensus 234 i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~k~~~ 313 (361)
T 1kew_A 234 LYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISR 313 (361)
T ss_dssp EEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHH
T ss_pred EEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecCCCCcccceeecCHHHHHH
Confidence 99999999999999876 467999999999999999999999888653211 1111 1122345789999999
Q ss_pred hcCCCcCCCHHHHHHHHHHHHHHhhh
Q 017290 313 KLGWAPSMKLKDGLRITYFWIKEQIE 338 (374)
Q Consensus 313 ~lg~~p~~~~~~~l~~~~~~~~~~~~ 338 (374)
+|||+|+++++++|+++++|+++...
T Consensus 314 ~lG~~p~~~~~e~l~~~~~~~~~~~~ 339 (361)
T 1kew_A 314 ELGWKPLETFESGIRKTVEWYLANTQ 339 (361)
T ss_dssp HHCCCCSCCHHHHHHHHHHHHHHCHH
T ss_pred HhCCCCccCHHHHHHHHHHHHHhccc
Confidence 99999999999999999999987643
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-42 Score=309.18 Aligned_cols=273 Identities=18% Similarity=0.250 Sum_probs=230.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccCCc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMGGM 104 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~~~ 104 (374)
|+||||||+||||+++++.|+++|++|++++|. .+|+.|.+.+.++++ ++|+|||+|+... .
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~-~ 69 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------LLDITNISQVQQVVQEIRPHIIIHCAAYTK-V 69 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------TSCTTCHHHHHHHHHHHCCSEEEECCCCCC-H
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------ccCCCCHHHHHHHHHhcCCCEEEECCcccC-h
Confidence 499999999999999999999999999999993 378999999999997 7999999999754 1
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
.....++...+++|+.++.+++++|++.++ ||||+||.++|+.... .+++|++ +..|.+.|+.+|..+|.+++
T Consensus 70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~----~~~~E~~--~~~p~~~Y~~sK~~~E~~~~ 142 (287)
T 3sc6_A 70 DQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRP----EGYDEFH--NPAPINIYGASKYAGEQFVK 142 (287)
T ss_dssp HHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCS----SCBCTTS--CCCCCSHHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCC----CCCCCCC--CCCCCCHHHHHHHHHHHHHH
Confidence 223356778899999999999999999998 7999999999987543 2688887 67889999999999999999
Q ss_pred HHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCCCCcE
Q 017290 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPV 264 (374)
Q Consensus 185 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~~~~~ 264 (374)
.+. .+++++||+.+||+.. ...+..++.. +..+.++.+++ ++.++++|++|+|++++.+++++.+++|
T Consensus 143 ~~~----~~~~ilR~~~v~G~~~-----~~~~~~~~~~-~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~~~ 210 (287)
T 3sc6_A 143 ELH----NKYFIVRTSWLYGKYG-----NNFVKTMIRL-GKEREEISVVA--DQIGSPTYVADLNVMINKLIHTSLYGTY 210 (287)
T ss_dssp HHC----SSEEEEEECSEECSSS-----CCHHHHHHHH-HTTCSEEEEEC--SCEECCEEHHHHHHHHHHHHTSCCCEEE
T ss_pred HhC----CCcEEEeeeeecCCCC-----CcHHHHHHHH-HHcCCCeEeec--CcccCceEHHHHHHHHHHHHhCCCCCeE
Confidence 864 4789999999999864 2345555554 44466777765 3789999999999999999998889999
Q ss_pred EecCCCccCHHHHHHHHHHhcCCCCCcccCCC------CCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHHH
Q 017290 265 NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG------PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKE 335 (374)
Q Consensus 265 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~------~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~ 335 (374)
|+++++.+++.|+++.+.+.+|.+.++..++. ........+|++|++ +|||.|.++++++|+++++|+++
T Consensus 211 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lg~~p~~~~~~~l~~~~~~~~~ 286 (287)
T 3sc6_A 211 HVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLR-LNGFLQMPSWEEGLERFFIETKS 286 (287)
T ss_dssp ECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSBCCBCCHHHH-HTTCCCCCBHHHHHHHHHHHTC-
T ss_pred EEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCcccccHHHHH-hhCCCCCccHHHHHHHHHHHHhc
Confidence 99999999999999999999998866554432 122355678999999 89999999999999999999865
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=322.49 Aligned_cols=308 Identities=19% Similarity=0.170 Sum_probs=242.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-----------------c------cccccceeEEecccch
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-----------------T------EDMFCHEFHLVDLRVM 81 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------------~------~~~~~i~~~~~dl~~~ 81 (374)
.+++||||||+||||+++++.|+++|++|++++|...... . ....+++++.+|+++.
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~ 89 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF 89 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCH
Confidence 5799999999999999999999999999999988642210 0 0123578899999999
Q ss_pred hhHhhhccC--CCEEEEcccccCCcccccCCcc---eehhhhHHHHHHHHHHHHhCCC-CeEEEeecccccCCCcccccc
Q 017290 82 DNCLKVTKG--VDHVFNLAADMGGMGFIQSNHS---VIMYNNTMISFNMLEASRISGV-KRFFYASSACIYPEFKQLETN 155 (374)
Q Consensus 82 ~~~~~~~~~--~d~vi~~a~~~~~~~~~~~~~~---~~~~~n~~~~~~ll~a~~~~~~-~~~i~~Ss~~vy~~~~~~~~~ 155 (374)
+.+.+++++ +|+|||+|+..... ....+++ ..+++|+.++.+++++|++.++ ++|||+||.++|+....
T Consensus 90 ~~~~~~~~~~~~D~Vih~A~~~~~~-~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~---- 164 (404)
T 1i24_A 90 EFLAESFKSFEPDSVVHFGEQRSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI---- 164 (404)
T ss_dssp HHHHHHHHHHCCSEEEECCSCCCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS----
T ss_pred HHHHHHHhccCCCEEEECCCCCCcc-chhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCC----
Confidence 999998886 99999999965321 1112222 3678999999999999999887 59999999999986532
Q ss_pred cCCCCCCC------------CCCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCC-------------
Q 017290 156 VSLKESDA------------WPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWK------------- 210 (374)
Q Consensus 156 ~~~~e~~~------------~~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~------------- 210 (374)
+++|+.+ .+..|.+.|+.+|..+|.+++.++.+.+++++++||+.+|||+....
T Consensus 165 -~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~ 243 (404)
T 1i24_A 165 -DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYD 243 (404)
T ss_dssp -CBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCS
T ss_pred -CCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccc
Confidence 3444311 14567889999999999999999888899999999999999975321
Q ss_pred C-CCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC--C--CcEEecCCCccCHHHHHHHHHHh-
Q 017290 211 G-MEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF--R--EPVNIGSDEMVSMNEMAEIVLSF- 284 (374)
Q Consensus 211 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~--~--~~~~i~~~~~~s~~e~~~~i~~~- 284 (374)
+ ....+..++..... +.++.+++++.+.++|+|++|+|++++.+++++. + ++||+++ +++++.|+++.+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~-g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~ 321 (404)
T 1i24_A 244 AVFGTALNRFCVQAAV-GHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAG 321 (404)
T ss_dssp TTTCCHHHHHHHHHHH-TCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHc-CCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHH
Confidence 0 02456666666554 5677778888899999999999999999998763 4 5999998 899999999999998
Q ss_pred --cCCCCCcccCCCCCC---CcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHHHhhhhhh
Q 017290 285 --EDKKLPIHHIPGPEG---VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 341 (374)
Q Consensus 285 --~g~~~~~~~~~~~~~---~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~~ 341 (374)
+|.+.++...|.... .....+|++|++ +|||.|+++++++++++++|++...+...
T Consensus 322 ~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~-~LG~~p~~~~~~~l~~~~~~~~~~~~~~~ 382 (404)
T 1i24_A 322 SKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAVQFKDRVD 382 (404)
T ss_dssp HTTTCCCCEEEECCSSCSCSSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHHHTGGGCC
T ss_pred HhhCCCccccccCcccCccccceEecCHHHHH-HcCCCcCcCHHHHHHHHHHHHHhhhhccC
Confidence 787766555554321 234567999998 69999999999999999999998776644
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-41 Score=309.99 Aligned_cols=290 Identities=18% Similarity=0.151 Sum_probs=230.4
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-cc-ccceeEEecccchhhHhhhccC--CCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-DM-FCHEFHLVDLRVMDNCLKVTKG--VDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~-~~i~~~~~dl~~~~~~~~~~~~--~d~vi~~a~ 99 (374)
..||+||||||+||||+++++.|+++|++|++++|+....... .. .+++++.+|++|.+.+.+++++ +|+|||+|+
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~ 98 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAA 98 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECce
Confidence 4678999999999999999999999999999999986432211 11 3678899999999999999987 999999999
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCC-CchHHhHHH
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ-DAYGLEKLA 178 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~-~~y~~sK~~ 178 (374)
..... ...++. +++|+.++.+++++|.+.++++|||+||.++|+.......+ +++|++ .|. +.|+.+|..
T Consensus 99 ~~~~~--~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~----~p~~~~Y~~sK~~ 169 (333)
T 2q1w_A 99 SYKDP--DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR----NPANSSYAISKSA 169 (333)
T ss_dssp CCSCT--TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC----CCTTCHHHHHHHH
T ss_pred ecCCC--ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC----CCCCCchHHHHHH
Confidence 75421 112222 88999999999999999999999999999999822111111 466654 566 899999999
Q ss_pred HHHHHHH-HHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhc
Q 017290 179 SEELCKH-YTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257 (374)
Q Consensus 179 ~E~~~~~-~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~ 257 (374)
+|.+++. +. +++++||+.+||++. ....+..++..... +. .+++ +.+.++++|++|+|++++.+++
T Consensus 170 ~E~~~~~s~~-----~~~ilR~~~v~gp~~----~~~~~~~~~~~~~~-~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~ 236 (333)
T 2q1w_A 170 NEDYLEYSGL-----DFVTFRLANVVGPRN----VSGPLPIFFQRLSE-GK--KCFV-TKARRDFVFVKDLARATVRAVD 236 (333)
T ss_dssp HHHHHHHHTC-----CEEEEEESEEESTTC----CSSHHHHHHHHHHT-TC--CCEE-EECEECEEEHHHHHHHHHHHHT
T ss_pred HHHHHHhhhC-----CeEEEeeceEECcCC----cCcHHHHHHHHHHc-CC--eeeC-CCceEeeEEHHHHHHHHHHHHh
Confidence 9999988 65 799999999999973 23455666665554 33 3445 6678899999999999999998
Q ss_pred cCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCCC-----cccccchHHHHHhcCCCcCCCHHHHHHHHHHH
Q 017290 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGV-----RGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332 (374)
Q Consensus 258 ~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~-----~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~ 332 (374)
++.+++||+++++.+++.|+++.+.+.+|.+ ++...|.+... ....+|++|+++. ||.|.++++++|+++++|
T Consensus 237 ~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-G~~p~~~~~~~l~~~~~~ 314 (333)
T 2q1w_A 237 GVGHGAYHFSSGTDVAIKELYDAVVEAMALP-SYPEPEIRELGPDDAPSILLDPSRTIQDF-GKIEFTPLKETVAAAVAY 314 (333)
T ss_dssp TCCCEEEECSCSCCEEHHHHHHHHHHHTTCS-SCCCCEEEECCTTSCCCCCBCCHHHHHHH-CCCCCCCHHHHHHHHHHH
T ss_pred cCCCCEEEeCCCCCccHHHHHHHHHHHhCCC-CceeCCCCCcccccccccccCCHHHHHhc-CCCcCCCHHHHHHHHHHH
Confidence 7668899999999999999999999999987 44444432222 5677899999998 999999999999999999
Q ss_pred HHHhh
Q 017290 333 IKEQI 337 (374)
Q Consensus 333 ~~~~~ 337 (374)
+++..
T Consensus 315 ~~~~~ 319 (333)
T 2q1w_A 315 FREYG 319 (333)
T ss_dssp HHHHC
T ss_pred HHHHC
Confidence 98764
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=305.52 Aligned_cols=297 Identities=17% Similarity=0.230 Sum_probs=235.5
Q ss_pred eEEEEcCcchhHHHHHHHHHhC--CCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccCC
Q 017290 28 RISVTGAGGFIASHIARRLKSE--GHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMGG 103 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~~ 103 (374)
+||||||+||||+++++.|+++ |++|++++|+..... +++++.+|++|.+.+.++++ ++|+|||+|+....
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~ 75 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSA 75 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCC
Confidence 5899999999999999999998 899999998765422 46788999999999999987 89999999986431
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHH
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELC 183 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~ 183 (374)
....++...+++|+.++.+++++|++.++++|||+||.++|+.... ..+.+|+. +..|.+.|+.+|..+|.++
T Consensus 76 --~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~---~~~~~e~~--~~~p~~~Y~~sK~~~e~~~ 148 (317)
T 3ajr_A 76 --KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETP---KNKVPSIT--ITRPRTMFGVTKIAAELLG 148 (317)
T ss_dssp --HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSC---SSSBCSSS--CCCCCSHHHHHHHHHHHHH
T ss_pred --ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCC---CCCccccc--cCCCCchHHHHHHHHHHHH
Confidence 2234566788999999999999999999999999999999986421 11455655 6678899999999999999
Q ss_pred HHHHhhhCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC--
Q 017290 184 KHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF-- 260 (374)
Q Consensus 184 ~~~~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~-- 260 (374)
+.+..+.+++++++||+.+||+...... ........+...+.. ..+..+++++..++++|++|+|++++.+++++.
T Consensus 149 ~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~ 227 (317)
T 3ajr_A 149 QYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKR-EKYKCYLAPNRALPMMYMPDALKALVDLYEADRDK 227 (317)
T ss_dssp HHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTT-CCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhC-CCceeecCccceeeeeEHHHHHHHHHHHHhCCccc
Confidence 9998888999999999999997532211 112233344444443 445566777889999999999999999998752
Q ss_pred ---CCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCC----CCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHH
Q 017290 261 ---REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP----EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWI 333 (374)
Q Consensus 261 ---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~ 333 (374)
+++||+++ ..+++.|+++.+.+.+|. .++...+.. .......+|++|++++|||+|.++++++|+++++|+
T Consensus 228 ~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~ 305 (317)
T 3ajr_A 228 LVLRNGYNVTA-YTFTPSELYSKIKERIPE-FEIEYKEDFRDKIAATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHI 305 (317)
T ss_dssp CSSCSCEECCS-EEECHHHHHHHHHTTCCS-CCEEECCCHHHHHHTTSCSCBCCHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_pred cccCceEecCC-ccccHHHHHHHHHHHCCc-cccccccccchhhccccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 48999986 689999999999999873 233222220 011235689999999999999999999999999999
Q ss_pred HHhhhh
Q 017290 334 KEQIEK 339 (374)
Q Consensus 334 ~~~~~~ 339 (374)
+++...
T Consensus 306 ~~~~~~ 311 (317)
T 3ajr_A 306 SEKLGI 311 (317)
T ss_dssp HHHTTS
T ss_pred Hhhhcc
Confidence 876553
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=306.12 Aligned_cols=291 Identities=18% Similarity=0.220 Sum_probs=232.2
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc--cccccceeEEecccchhhHhhhcc--CCCEEEEc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT--EDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNL 97 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~ 97 (374)
....+|+||||||+||||+++++.|+++|++|++++|+...... ....+++++.+|++|.+.+.++++ ++|+||||
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~ 95 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHS 95 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEEC
Confidence 44566899999999999999999999999999999997543221 111357889999999999999998 99999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHH
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 177 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~ 177 (374)
|+..... ...++. +++|+.++.+++++|.+.++++|||+||.++|+..... +.+++|++ .|.+.|+.+|.
T Consensus 96 A~~~~~~--~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~--~~~~~E~~----~~~~~Y~~sK~ 165 (330)
T 2pzm_A 96 AAAYKDP--DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATV--PIPIDSPT----APFTSYGISKT 165 (330)
T ss_dssp CCCCSCT--TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSS--SBCTTCCC----CCCSHHHHHHH
T ss_pred CccCCCc--cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccC--CCCcCCCC----CCCChHHHHHH
Confidence 9975421 122223 88999999999999999999999999999999864321 11455554 56789999999
Q ss_pred HHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHH-HHHhhh
Q 017290 178 ASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE-GVLRLT 256 (374)
Q Consensus 178 ~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~-~i~~~~ 256 (374)
.+|.+++.+ +++++++||+++|||+. ....+..++..... +. .+++++. .++++|++|+|+ +++.++
T Consensus 166 ~~e~~~~~~----~~~~~~iR~~~v~gp~~----~~~~~~~~~~~~~~-~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~ 233 (330)
T 2pzm_A 166 AGEAFLMMS----DVPVVSLRLANVTGPRL----AIGPIPTFYKRLKA-GQ--KCFCSDT-VRDFLDMSDFLAIADLSLQ 233 (330)
T ss_dssp HHHHHHHTC----SSCEEEEEECEEECTTC----CSSHHHHHHHHHHT-TC--CCCEESC-EECEEEHHHHHHHHHHHTS
T ss_pred HHHHHHHHc----CCCEEEEeeeeeECcCC----CCCHHHHHHHHHHc-CC--EEeCCCC-EecceeHHHHHHHHHHHHh
Confidence 999999885 78999999999999974 12345555555443 33 3445556 789999999999 999999
Q ss_pred ccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCCCcccccchHHH-----HHhcCCCcCCCHHHHHHHHHH
Q 017290 257 KSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLI-----KEKLGWAPSMKLKDGLRITYF 331 (374)
Q Consensus 257 ~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~d~~k~-----~~~lg~~p~~~~~~~l~~~~~ 331 (374)
+++.+++||+++++.+++.|+++.+.+.+|.+ ++...|.+.......+|++|+ ++ |||.|.++++++|+++++
T Consensus 234 ~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~d~~k~~~~~l~~-lG~~p~~~~~~~l~~~~~ 311 (330)
T 2pzm_A 234 EGRPTGVFNVSTGEGHSIKEVFDVVLDYVGAT-LAEPVPVVAPGADDVPSVVLDPSKTETE-FGWKAKVDFKDTITGQLA 311 (330)
T ss_dssp TTCCCEEEEESCSCCEEHHHHHHHHHHHHTCC-CSSCCCEECCCTTSCSEECBCCHHHHHH-HCCCCCCCHHHHHHHHHH
T ss_pred hcCCCCEEEeCCCCCCCHHHHHHHHHHHhCCC-CceeCCCCcchhhccCCHHHHhhchHHH-cCCcccCCHHHHHHHHHH
Confidence 87558899999999999999999999999987 554444332345567888888 77 999999999999999999
Q ss_pred HHHHh
Q 017290 332 WIKEQ 336 (374)
Q Consensus 332 ~~~~~ 336 (374)
|+++.
T Consensus 312 ~~~~~ 316 (330)
T 2pzm_A 312 WYDKY 316 (330)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 99865
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-40 Score=299.69 Aligned_cols=273 Identities=17% Similarity=0.185 Sum_probs=225.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMG 102 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~ 102 (374)
..|+|||||||||||+++++.|+++|++|++++|+ .+|+.|.+.+.++++ ++|+|||+|+...
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~ 75 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------DLDITNVLAVNKFFNEKKPNVVINCAAHTA 75 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------cCCCCCHHHHHHHHHhcCCCEEEECCccCC
Confidence 46899999999999999999999999999999986 278999999999888 8999999999643
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHH
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL 182 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~ 182 (374)
. .....+....+++|+.++.+++++|++.++ +|||+||.++|+.... .+++|++ +..|.+.|+.+|..+|.+
T Consensus 76 ~-~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~----~~~~E~~--~~~~~~~Y~~sK~~~E~~ 147 (292)
T 1vl0_A 76 V-DKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAK----EPITEFD--EVNPQSAYGKTKLEGENF 147 (292)
T ss_dssp H-HHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCS----SCBCTTS--CCCCCSHHHHHHHHHHHH
T ss_pred H-HHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCC----CCCCCCC--CCCCccHHHHHHHHHHHH
Confidence 1 122345677889999999999999999888 9999999999987542 2577777 667889999999999999
Q ss_pred HHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCCCC
Q 017290 183 CKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFRE 262 (374)
Q Consensus 183 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~~~ 262 (374)
++.+. .+++++||+.+||+ .. ..+..++.... .+..+.+.+ ++.++++|++|+|++++.+++++.++
T Consensus 148 ~~~~~----~~~~~lR~~~v~G~-~~-----~~~~~~~~~~~-~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~ 214 (292)
T 1vl0_A 148 VKALN----PKYYIVRTAWLYGD-GN-----NFVKTMINLGK-THDELKVVH--DQVGTPTSTVDLARVVLKVIDEKNYG 214 (292)
T ss_dssp HHHHC----SSEEEEEECSEESS-SS-----CHHHHHHHHHH-HCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTCCE
T ss_pred HHhhC----CCeEEEeeeeeeCC-Cc-----ChHHHHHHHHh-cCCcEEeec--CeeeCCccHHHHHHHHHHHHhcCCCc
Confidence 99864 47999999999998 31 24444544443 355666655 46889999999999999999877789
Q ss_pred cEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCC------CCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHH
Q 017290 263 PVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP------EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIK 334 (374)
Q Consensus 263 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~ 334 (374)
+||+++++.+++.|+++.+.+.+|.+.++..++.. .......+|++|++++|||+|+ +++++|+++++||+
T Consensus 215 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~ 291 (292)
T 1vl0_A 215 TFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ 291 (292)
T ss_dssp EEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred EEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHHHcCCCCC-CHHHHHHHHHHHhc
Confidence 99999999999999999999999987654444321 1234567899999999999998 99999999999986
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-40 Score=296.59 Aligned_cols=266 Identities=18% Similarity=0.146 Sum_probs=214.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGM 104 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~ 104 (374)
+||+|||||| ||||+++++.|+++||+|++++|++.........+++++.+|+.|.+ ++++|+|||+|+....
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~- 76 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----LDGVTHLLISTAPDSG- 76 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-----CTTCCEEEECCCCBTT-
T ss_pred CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-----cCCCCEEEECCCcccc-
Confidence 4689999998 99999999999999999999999876544333456899999998844 7899999999986431
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHh--CCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHH
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRI--SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL 182 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~--~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~ 182 (374)
....+.++++++++ .++++|||+||.++|+..... +++|++ +..|.+.|+.+|..+|++
T Consensus 77 -------------~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~----~~~E~~--~~~p~~~Y~~sK~~~E~~ 137 (286)
T 3ius_A 77 -------------GDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGA----WVDETT--PLTPTAARGRWRVMAEQQ 137 (286)
T ss_dssp -------------BCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTC----EECTTS--CCCCCSHHHHHHHHHHHH
T ss_pred -------------ccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCC----CcCCCC--CCCCCCHHHHHHHHHHHH
Confidence 01235789999998 678999999999999875432 578887 678889999999999999
Q ss_pred HHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC-C
Q 017290 183 CKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF-R 261 (374)
Q Consensus 183 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~-~ 261 (374)
++.+ .+++++++||+.+||++... +.. +..+....+.+. .+.++++|++|+|++++.+++++. +
T Consensus 138 ~~~~---~~~~~~ilRp~~v~G~~~~~----------~~~-~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~~g 202 (286)
T 3ius_A 138 WQAV---PNLPLHVFRLAGIYGPGRGP----------FSK-LGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPDPG 202 (286)
T ss_dssp HHHS---TTCCEEEEEECEEEBTTBSS----------STT-SSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCCTT
T ss_pred HHhh---cCCCEEEEeccceECCCchH----------HHH-HhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCCCC
Confidence 9997 58999999999999997532 111 233555666544 578999999999999999999874 6
Q ss_pred CcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCC---CC------CcccccchHHHHHhcCCCcCC-CHHHHHHHHHH
Q 017290 262 EPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP---EG------VRGRNSDNTLIKEKLGWAPSM-KLKDGLRITYF 331 (374)
Q Consensus 262 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~---~~------~~~~~~d~~k~~~~lg~~p~~-~~~~~l~~~~~ 331 (374)
++||+++++.+++.|+++.+.+.+|.+.+....... .. .....+|++|+++.|||+|++ +++++|+++++
T Consensus 203 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~ 282 (286)
T 3ius_A 203 AVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQA 282 (286)
T ss_dssp CEEEECCSCCBCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHH
T ss_pred CEEEEeCCCCccHHHHHHHHHHHcCCCCCcccchhhhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHH
Confidence 799999999999999999999999987653211111 11 255678999999999999999 79999999986
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-41 Score=303.79 Aligned_cols=276 Identities=14% Similarity=0.134 Sum_probs=225.7
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccC--CCEEEEcccccCCc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKG--VDHVFNLAADMGGM 104 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~--~d~vi~~a~~~~~~ 104 (374)
|+||||||+||||+++++.|+ +||+|++++|++. ++.+|+.|.+.+.+++++ +|+|||+|+....
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~- 67 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV- 67 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH-
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------cccccCCCHHHHHHHHHhcCCCEEEECcccCCH-
Confidence 589999999999999999999 8999999999852 457899999999998875 9999999996431
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
.....+++..+++|+.++.+++++|++.++ +|||+||.++|+.... .+++|++ +..|.+.|+.+|..+|.+++
T Consensus 68 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~----~~~~E~~--~~~p~~~Y~~sK~~~E~~~~ 140 (299)
T 1n2s_A 68 DKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGD----IPWQETD--ATSPLNVYGKTKLAGEKALQ 140 (299)
T ss_dssp HHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTT----CCBCTTS--CCCCSSHHHHHHHHHHHHHH
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCC----CCCCCCC--CCCCccHHHHHHHHHHHHHH
Confidence 123456677889999999999999999988 8999999999987542 2577777 66788999999999999999
Q ss_pred HHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC-----
Q 017290 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----- 259 (374)
Q Consensus 185 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----- 259 (374)
.+. .+++++||+.+||+... ..+..++.... .+.++.+++ ++.++++|++|+|++++.+++++
T Consensus 141 ~~~----~~~~ilRp~~v~G~~~~-----~~~~~~~~~~~-~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~~~ 208 (299)
T 1n2s_A 141 DNC----PKHLIFRTSWVYAGKGN-----NFAKTMLRLAK-ERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKPE 208 (299)
T ss_dssp HHC----SSEEEEEECSEECSSSC-----CHHHHHHHHHH-HCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCGG
T ss_pred HhC----CCeEEEeeeeecCCCcC-----cHHHHHHHHHh-cCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhccccc
Confidence 864 38999999999999642 34555555444 356666655 37899999999999999999875
Q ss_pred CCCcEEecCCCccCHHHHHHHHHHhcCCCC------CcccCCC------CCCCcccccchHHHHHhcCCCcCCCHHHHHH
Q 017290 260 FREPVNIGSDEMVSMNEMAEIVLSFEDKKL------PIHHIPG------PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLR 327 (374)
Q Consensus 260 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~------~~~~~~~------~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~ 327 (374)
.+++||+++++.+++.|+++.+.+.+|.+. .+...+. ........+|++|++++|||+|. +++++|+
T Consensus 209 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~ 287 (299)
T 1n2s_A 209 VAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILP-QWELGVK 287 (299)
T ss_dssp GCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCC-BHHHHHH
T ss_pred cCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHhcCCCCC-CHHHHHH
Confidence 378999999999999999999999988652 2222221 11234568899999999999997 8999999
Q ss_pred HHHHHHHH
Q 017290 328 ITYFWIKE 335 (374)
Q Consensus 328 ~~~~~~~~ 335 (374)
++++|+++
T Consensus 288 ~~~~~~~~ 295 (299)
T 1n2s_A 288 RMLTEMFT 295 (299)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHh
Confidence 99999975
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-40 Score=303.73 Aligned_cols=301 Identities=16% Similarity=0.116 Sum_probs=237.0
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCC-------CEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-CCCEE
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEG-------HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-GVDHV 94 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-~~d~v 94 (374)
.+++|+||||||+||||+++++.|+++| ++|++++|+..........+++++.+|+.|.+.+.++++ ++|+|
T Consensus 11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~v 90 (342)
T 2hrz_A 11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDVI 90 (342)
T ss_dssp CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCSEE
T ss_pred CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCCEE
Confidence 3466899999999999999999999999 899999998654322223457889999999999999884 89999
Q ss_pred EEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-----CCeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 95 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-----VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-----~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
||+|+.... ....++...+++|+.++.+++++|++.+ +++|||+||.++|+.... .+++|++ +..|.
T Consensus 91 ih~A~~~~~--~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~----~~~~E~~--~~~~~ 162 (342)
T 2hrz_A 91 FHLAAIVSG--EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLP----YPIPDEF--HTTPL 162 (342)
T ss_dssp EECCCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCC----SSBCTTC--CCCCS
T ss_pred EECCccCcc--cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCC----CCcCCCC--CCCCc
Confidence 999996431 2234566778999999999999998876 789999999999986432 2577877 66788
Q ss_pred CchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccC-CCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHH
Q 017290 170 DAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG-PFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 248 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 248 (374)
+.|+.+|..+|.+++.++.+.+++.+++|++.+|| |+........++..++...+. +....+++.+.....++|++|+
T Consensus 163 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~Dv 241 (342)
T 2hrz_A 163 TSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLV-GQEAVLPVPESIRHWHASPRSA 241 (342)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHT-TCCEEECSCTTCEEEEECHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhc-CCCeeccCCCccceeeEehHHH
Confidence 99999999999999999888789999999999998 653221122344555555544 5555565566667789999999
Q ss_pred HHHHHhhhccC-----CCCcEEecCCCccCHHHHHHHHHHhcCCCC--CcccCCCCC-----CCcccccchHHHHHhcCC
Q 017290 249 VEGVLRLTKSD-----FREPVNIGSDEMVSMNEMAEIVLSFEDKKL--PIHHIPGPE-----GVRGRNSDNTLIKEKLGW 316 (374)
Q Consensus 249 a~~i~~~~~~~-----~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~--~~~~~~~~~-----~~~~~~~d~~k~~~~lg~ 316 (374)
|++++.+++.+ .+++||++ ++.+++.|+++.+.+.+|.+. .+...+.+. ......+|++|+++ |||
T Consensus 242 a~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~ 319 (342)
T 2hrz_A 242 VGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGWAPGFEAKRARE-LGF 319 (342)
T ss_dssp HHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTTSCCCBCCHHHHH-TTC
T ss_pred HHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcccccccChHHHHH-cCC
Confidence 99999999875 46899996 578999999999999998753 222233211 11223589999998 999
Q ss_pred CcCCCHHHHHHHHHHHHH
Q 017290 317 APSMKLKDGLRITYFWIK 334 (374)
Q Consensus 317 ~p~~~~~~~l~~~~~~~~ 334 (374)
.|+++++++|+++++|++
T Consensus 320 ~p~~~l~e~l~~~~~~~~ 337 (342)
T 2hrz_A 320 TAESSFEEIIQVHIEDEL 337 (342)
T ss_dssp CCCSSHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHhc
Confidence 999999999999999986
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=329.24 Aligned_cols=321 Identities=20% Similarity=0.259 Sum_probs=244.8
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc--CCCE
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK--GVDH 93 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~--~~d~ 93 (374)
.+++|+||||||+||||++|++.|+++|++|++++|+....... ...+++++.+|+.+.+.+.++++ ++|+
T Consensus 8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~ 87 (699)
T 1z45_A 8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDS 87 (699)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence 34568999999999999999999999999999999876532110 12357889999999999999988 8999
Q ss_pred EEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchH
Q 017290 94 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 173 (374)
Q Consensus 94 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~ 173 (374)
|||+|+..... .........+++|+.++.+++++|++.++++|||+||.++|+.....+...+++|++ +..|.+.|+
T Consensus 88 Vih~A~~~~~~-~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~--~~~p~~~Y~ 164 (699)
T 1z45_A 88 VIHFAGLKAVG-ESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEEC--PLGPTNPYG 164 (699)
T ss_dssp EEECCSCCCHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTS--CCCCCSHHH
T ss_pred EEECCcccCcC-ccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccC--CCCCCChHH
Confidence 99999965311 122344567889999999999999999999999999999998643211122567776 567889999
Q ss_pred HhHHHHHHHHHHHHhh--hCCcEEEEeeCcccCCCCCCC-C-----CCCcHHHHHHHHhcc-CCceEeeC------CCcc
Q 017290 174 LEKLASEELCKHYTKD--FGIECRVGRFHNIYGPFGTWK-G-----MEKAPAAFCRKALTS-TDKFEMWG------DGLQ 238 (374)
Q Consensus 174 ~sK~~~E~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~-~-----~~~~~~~~~~~~~~~-~~~~~~~~------~~~~ 238 (374)
.+|..+|.+++.++.+ .+++++++||+.+||+..... + ....+..++.....+ +.++.+++ ++++
T Consensus 165 ~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 244 (699)
T 1z45_A 165 HTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTP 244 (699)
T ss_dssp HHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSC
T ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCe
Confidence 9999999999999876 689999999999999864211 0 011233344444332 34565655 5778
Q ss_pred cccceeHHHHHHHHHhhhccC--------CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCC-CCCcccccchHH
Q 017290 239 TRSFTFIDECVEGVLRLTKSD--------FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP-EGVRGRNSDNTL 309 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~--------~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-~~~~~~~~d~~k 309 (374)
.++++|++|+|++++.+++.. .+++||+++++.+++.|+++.+.+.+|.+.++...+.. .......+|++|
T Consensus 245 ~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k 324 (699)
T 1z45_A 245 IRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTAKPDR 324 (699)
T ss_dssp EECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------CCCCCBCCHH
T ss_pred eEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecCCCCCccccccCCHHH
Confidence 899999999999999988641 24789999999999999999999999988765544422 224457889999
Q ss_pred HHHhcCCCcCCCHHHHHHHHHHHHHHhhhhhhhcCce
Q 017290 310 IKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGID 346 (374)
Q Consensus 310 ~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (374)
++++|||+|+++++++|+++++|++++.......+..
T Consensus 325 a~~~LG~~p~~~l~egl~~~~~w~~~~~~~~~~~~~~ 361 (699)
T 1z45_A 325 AKRELKWQTELQVEDSCKDLWKWTTENPFGYQLRGVE 361 (699)
T ss_dssp HHHHTCCCCCCCHHHHHHHHHHHHHHCTTCSCCTTEE
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHhCCcchhhhhee
Confidence 9999999999999999999999999876665555544
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=298.66 Aligned_cols=286 Identities=17% Similarity=0.213 Sum_probs=203.1
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMGG 103 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~~ 103 (374)
+|+||||||+||||++++++|+++|++|++++|+... .+ ++.+|+++.+.+.++++ ++|+|||||+....
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~ 73 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRP 73 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHHCCSEEEECC-----
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------CC--eEEecCCCHHHHHHHHHhhCCCEEEECCcccCh
Confidence 5899999999999999999999999999999987543 12 67899999998888887 49999999996532
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHH
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELC 183 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~ 183 (374)
.....++...+++|+.++.+++++|.+.++ +|||+||.++|+... .+++|++ +..|.+.|+.+|..+|.++
T Consensus 74 -~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~-----~~~~E~~--~~~~~~~Y~~sK~~~e~~~ 144 (315)
T 2ydy_A 74 -DVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTN-----PPYREED--IPAPLNLYGKTKLDGEKAV 144 (315)
T ss_dssp ---------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSS-----CSBCTTS--CCCCCSHHHHHHHHHHHHH
T ss_pred -hhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCC-----CCCCCCC--CCCCcCHHHHHHHHHHHHH
Confidence 123456677899999999999999999887 999999999998732 2578877 6678899999999999999
Q ss_pred HHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhcc-----
Q 017290 184 KHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS----- 258 (374)
Q Consensus 184 ~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~----- 258 (374)
+.+ +++++++||+.+||+..... ...+..++......+..+.+. +++.++++|++|+|++++.++++
T Consensus 145 ~~~----~~~~~~lR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~ 216 (315)
T 2ydy_A 145 LEN----NLGAAVLRIPILYGEVEKLE--ESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDP 216 (315)
T ss_dssp HHH----CTTCEEEEECSEECSCSSGG--GSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCT
T ss_pred HHh----CCCeEEEeeeeeeCCCCccc--ccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhcccc
Confidence 985 56789999999999875311 123333444333134555553 35788999999999999998875
Q ss_pred CCCCcEEecCCCccCHHHHHHHHHHhcCCCCC-cccCCC-----CCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHH
Q 017290 259 DFREPVNIGSDEMVSMNEMAEIVLSFEDKKLP-IHHIPG-----PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332 (374)
Q Consensus 259 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~-----~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~ 332 (374)
..+++||+++++.+++.|+++.+.+.+|.+.+ +..++. ........+|++|+++. ||.|.++++++|+++++|
T Consensus 217 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-G~~p~~~~~~~l~~~~~~ 295 (315)
T 2ydy_A 217 SIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETL-GIGQRTPFRIGIKESLWP 295 (315)
T ss_dssp TCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHT-TCCCCCCHHHHHHHHHGG
T ss_pred CCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHHHHhc-CCCCCCCHHHHHHHHHHH
Confidence 35789999999999999999999999998754 323332 11234567899999998 999999999999999999
Q ss_pred HHHhh
Q 017290 333 IKEQI 337 (374)
Q Consensus 333 ~~~~~ 337 (374)
+++..
T Consensus 296 ~~~~~ 300 (315)
T 2ydy_A 296 FLIDK 300 (315)
T ss_dssp GCC--
T ss_pred Hccch
Confidence 98764
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=324.50 Aligned_cols=307 Identities=20% Similarity=0.266 Sum_probs=243.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCCCCccccc-ccccceeEEecccchhh-HhhhccCCCEEEEccccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSE-GHYIIASDWKKNEHMTE-DMFCHEFHLVDLRVMDN-CLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~-~~~~i~~~~~dl~~~~~-~~~~~~~~d~vi~~a~~~ 101 (374)
++|+||||||+||||++++++|++. |++|++++|++...... ...+++++.+|+++.+. +.++++++|+|||+|+..
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~ 393 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA 393 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCCC
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECceec
Confidence 5689999999999999999999998 89999999987643221 22467889999998765 777888999999999965
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCC----C-CCCCCchHHhH
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----P-AEPQDAYGLEK 176 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~----~-~~~~~~y~~sK 176 (374)
... .+..++...+++|+.++.+++++|++.+ ++|||+||.++|+..... +++|+++. + ..|.+.|+.+|
T Consensus 394 ~~~-~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~----~~~E~~~~~~~~p~~~p~~~Y~~sK 467 (660)
T 1z7e_A 394 TPI-EYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDK----YFDEDHSNLIVGPVNKPRWIYSVSK 467 (660)
T ss_dssp CTH-HHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSS----SBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred Ccc-ccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCc----ccCCCccccccCcccCCCCCcHHHH
Confidence 321 1234566788899999999999999998 899999999999875422 46666521 1 14566899999
Q ss_pred HHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCC-----CCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHH
Q 017290 177 LASEELCKHYTKDFGIECRVGRFHNIYGPFGTWK-----GMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG 251 (374)
Q Consensus 177 ~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 251 (374)
..+|.+++.++.+.+++++++||+.+||+..... +....+..++..... +.++.+++++++.++|+|++|+|++
T Consensus 468 ~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~g~g~~~~~~i~v~Dva~a 546 (660)
T 1z7e_A 468 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE-GSPIKLIDGGKQKRCFTDIRDGIEA 546 (660)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHH-TCCEEEEGGGCCEEECEEHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHc-CCCcEEeCCCCeEEEEEEHHHHHHH
Confidence 9999999999888899999999999999975310 113345566665554 5677777888889999999999999
Q ss_pred HHhhhccC----CCCcEEecCCC-ccCHHHHHHHHHHhcCCCCCcccCCCC----------------CCCcccccchHHH
Q 017290 252 VLRLTKSD----FREPVNIGSDE-MVSMNEMAEIVLSFEDKKLPIHHIPGP----------------EGVRGRNSDNTLI 310 (374)
Q Consensus 252 i~~~~~~~----~~~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~----------------~~~~~~~~d~~k~ 310 (374)
++.+++++ .+++||+++++ ++++.|+++.+.+.+|.+.....+|.. .......+|++|+
T Consensus 547 i~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka 626 (660)
T 1z7e_A 547 LYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNA 626 (660)
T ss_dssp HHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCCCBCCHHH
T ss_pred HHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchhhcccCHHHH
Confidence 99998764 36799999886 899999999999998865433333321 1234467899999
Q ss_pred HHhcCCCcCCCHHHHHHHHHHHHHHhhh
Q 017290 311 KEKLGWAPSMKLKDGLRITYFWIKEQIE 338 (374)
Q Consensus 311 ~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 338 (374)
+++|||.|+++++++|+++++|++++..
T Consensus 627 ~~~LG~~p~~~l~egl~~~i~~~~~~~~ 654 (660)
T 1z7e_A 627 HRCLDWEPKIDMQETIDETLDFFLRTVD 654 (660)
T ss_dssp HHHHCCCCCCCHHHHHHHHHHHHHTTSC
T ss_pred HHhcCCCccCcHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999987643
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=298.74 Aligned_cols=301 Identities=15% Similarity=0.137 Sum_probs=212.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhccCCCEEEEc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNL 97 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~ 97 (374)
++|+||||||+||||++|+++|+++||+|+++.|+....... ...+++++.+|++|.+.+.++++++|+|||+
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~ 87 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHV 87 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence 468999999999999999999999999999999876532110 1125678899999999999999999999999
Q ss_pred ccccCCcccccCCc-ceehhhhHHHHHHHHHHHHhCC-CCeEEEeeccc-ccCCCcccccccCCCCCCCCCC------CC
Q 017290 98 AADMGGMGFIQSNH-SVIMYNNTMISFNMLEASRISG-VKRFFYASSAC-IYPEFKQLETNVSLKESDAWPA------EP 168 (374)
Q Consensus 98 a~~~~~~~~~~~~~-~~~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~-vy~~~~~~~~~~~~~e~~~~~~------~~ 168 (374)
|+... ....++ ...+++|+.++.+++++|++.+ ++||||+||.+ +|+.... ..+.+++|+++.+. .|
T Consensus 88 A~~~~---~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~-~~~~~~~E~~~~~~~~~~~~~~ 163 (338)
T 2rh8_A 88 ATPVH---FASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLD-GTGLVVDEKNWTDIEFLTSAKP 163 (338)
T ss_dssp SSCCC---C---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHT-CSCCCCCTTTTTCC-------C
T ss_pred CCccC---CCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcC-CCCcccChhhccchhhccccCC
Confidence 98642 222233 3478999999999999999986 89999999987 4432110 00114566653211 11
Q ss_pred -CCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC------ccccc
Q 017290 169 -QDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG------LQTRS 241 (374)
Q Consensus 169 -~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 241 (374)
...|+.+|..+|.+++.+....+++++++||+.+|||..... ....+ ..+...+. +... .++.. ...++
T Consensus 164 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~-~~~~~-~~~~~~~~-g~~~-~~~~~~~~~~~~~~~~ 239 (338)
T 2rh8_A 164 PTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSD-VPSSI-GLAMSLIT-GNEF-LINGMKGMQMLSGSVS 239 (338)
T ss_dssp CCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSS-CCHHH-HHHHHHHH-TCHH-HHHHHHHHHHHHSSEE
T ss_pred ccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC-CCchH-HHHHHHHc-CCcc-ccccccccccccCccc
Confidence 226999999999999999887899999999999999975321 11111 11111122 2221 11111 12347
Q ss_pred ceeHHHHHHHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCC-CCCcccCCCCCCCcccccchHHHHHhcCCCcC
Q 017290 242 FTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDK-KLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPS 319 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~ 319 (374)
|+|++|+|++++.+++++ .++.|++++ ..+++.|+++.+.+.++. +.+....+.+ ......+|++|+ ++|||+|+
T Consensus 240 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~d~~k~-~~lG~~p~ 316 (338)
T 2rh8_A 240 IAHVEDVCRAHIFVAEKESASGRYICCA-ANTSVPELAKFLSKRYPQYKVPTDFGDFP-PKSKLIISSEKL-VKEGFSFK 316 (338)
T ss_dssp EEEHHHHHHHHHHHHHCTTCCEEEEECS-EEECHHHHHHHHHHHCTTSCCCCCCTTSC-SSCSCCCCCHHH-HHHTCCCS
T ss_pred EEEHHHHHHHHHHHHcCCCcCCcEEEec-CCCCHHHHHHHHHHhCCCCCCCCCCCCCC-cCcceeechHHH-HHhCCCCC
Confidence 999999999999999875 467788875 569999999999988752 2222111111 112378899999 56999999
Q ss_pred CCHHHHHHHHHHHHHHh
Q 017290 320 MKLKDGLRITYFWIKEQ 336 (374)
Q Consensus 320 ~~~~~~l~~~~~~~~~~ 336 (374)
++++++|+++++|+++.
T Consensus 317 ~~l~~gl~~~~~~~~~~ 333 (338)
T 2rh8_A 317 YGIEEIYDESVEYFKAK 333 (338)
T ss_dssp CCHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHc
Confidence 99999999999999754
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=296.03 Aligned_cols=294 Identities=14% Similarity=0.048 Sum_probs=230.1
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCC-----CEEEEEeCCCCcccccccccceeEEecccchhhHhhhccC---CCEEEEc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEG-----HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKG---VDHVFNL 97 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~---~d~vi~~ 97 (374)
+|+||||||+||||++++++|+++| ++|++++|++.... ....+++++.+|+.|.+.+.+++++ +|+||||
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~ 79 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYV 79 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEEC
Confidence 3789999999999999999999999 99999999876543 2234678999999999999999987 9999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhC--CCCeEE-------EeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRIS--GVKRFF-------YASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i-------~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
|+... .++...+++|+.++.+++++|++. ++++|| |+||.++|+.... .+.+++|++ +..|
T Consensus 80 a~~~~------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~--~~~~~~E~~--~~~~ 149 (364)
T 2v6g_A 80 TWANR------STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIES--HDPPYTEDL--PRLK 149 (364)
T ss_dssp CCCCC------SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCC--CCSSBCTTS--CCCS
T ss_pred CCCCc------chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhcccccc--CCCCCCccc--cCCc
Confidence 99542 356678899999999999999998 788998 8999999987521 112577776 3333
Q ss_pred -CCchHHhHHHHHHHHHHHHhhhC-CcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHh--ccCCceEeeCCCc---cccc
Q 017290 169 -QDAYGLEKLASEELCKHYTKDFG-IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKAL--TSTDKFEMWGDGL---QTRS 241 (374)
Q Consensus 169 -~~~y~~sK~~~E~~~~~~~~~~~-~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~ 241 (374)
.+.| ..+|++++++....+ ++++++||+.+||++.... .......++...+ ..+.++.++++++ ...+
T Consensus 150 ~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~ 224 (364)
T 2v6g_A 150 YMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSM-MNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSD 224 (364)
T ss_dssp SCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCS-SCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBC
T ss_pred cchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcc-cchHHHHHHHHHHHHhcCCceecCCCcccccccCC
Confidence 5667 358999999887776 9999999999999976421 1222333233333 3456666667763 4478
Q ss_pred ceeHHHHHHHHHhhhccC--CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcc--cCCCC--------------------
Q 017290 242 FTFIDECVEGVLRLTKSD--FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIH--HIPGP-------------------- 297 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~~~-------------------- 297 (374)
++|++|+|++++.+++++ .+++||+++++.+|+.|+++.+.+.+|.+.... .+|.+
T Consensus 225 ~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 304 (364)
T 2v6g_A 225 CSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENG 304 (364)
T ss_dssp CEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhC
Confidence 889999999999999876 467999999999999999999999999875433 33321
Q ss_pred --CC---C------------cc-cccchHHHHHhcCCCcCCCHHHHHHHHHHHHHHh
Q 017290 298 --EG---V------------RG-RNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQ 336 (374)
Q Consensus 298 --~~---~------------~~-~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 336 (374)
.. . .. ..+|++|+++ |||+|.++++++|+++++|+++.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~l~~~~~~~~~~ 360 (364)
T 2v6g_A 305 LTPTKLKDVGIWWFGDVILGNECFLDSMNKSKE-HGFLGFRNSKNAFISWIDKAKAY 360 (364)
T ss_dssp CCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHHHHT
T ss_pred CCccccccccccchhhhccccchhhcchHHHHh-cCCCCCCCHHHHHHHHHHHHHHc
Confidence 00 0 23 5789999988 99999999999999999999864
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=299.25 Aligned_cols=302 Identities=15% Similarity=0.066 Sum_probs=227.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-------cccceeE-EecccchhhHhhhccCCCEEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-------MFCHEFH-LVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~i~~~-~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
++|+||||||+||||+++++.|+++|++|++++|+........ ..+++++ .+|++|.+.+.++++++|+|||
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 89 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH 89 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEEE
Confidence 5689999999999999999999999999999999754321110 1346777 7999999999999999999999
Q ss_pred cccccCCcccccCCcceehhhhHHHHHHHHHHHHh-CCCCeEEEeecccccCCCcccccccCCCCCCCC-----------
Q 017290 97 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRI-SGVKRFFYASSACIYPEFKQLETNVSLKESDAW----------- 164 (374)
Q Consensus 97 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~-~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~----------- 164 (374)
+|+.... ..++...+++|+.++.+++++|.+ .++++|||+||.++|+.......+.+++|+++.
T Consensus 90 ~A~~~~~----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~ 165 (342)
T 1y1p_A 90 IASVVSF----SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLP 165 (342)
T ss_dssp CCCCCSC----CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSC
T ss_pred eCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccc
Confidence 9997532 235667889999999999999985 678899999999998643211111256666521
Q ss_pred ---CCCCCCchHHhHHHHHHHHHHHHhhh--CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 165 ---PAEPQDAYGLEKLASEELCKHYTKDF--GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 165 ---~~~~~~~y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+..|.+.|+.+|..+|.+++.+..+. +++++++||+.+||+..........+..++..... +....+++.+ +.
T Consensus 166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~ 243 (342)
T 1y1p_A 166 ESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFN-GEVSPALALM-PP 243 (342)
T ss_dssp TTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHT-TCCCHHHHTC-CS
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHc-CCCccccccC-Cc
Confidence 12355789999999999999998765 68899999999999975432111255666666554 4555445554 67
Q ss_pred ccceeHHHHHHHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCC-CCcccCCCCCCCcccccchHHHHHhcCC-
Q 017290 240 RSFTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKK-LPIHHIPGPEGVRGRNSDNTLIKEKLGW- 316 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~d~~k~~~~lg~- 316 (374)
++++|++|+|++++.+++++ ..+.+++.++..+|+.|+++.+.+.+|.+ ++. ..+. .......+|++|+++.|||
T Consensus 244 ~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~-~~~~-~~~~~~~~d~~k~~~~lg~~ 321 (342)
T 1y1p_A 244 QYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPA-DFPD-QGQDLSKFDTAPSLEILKSL 321 (342)
T ss_dssp EEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCC-CCCC-CCCCCCEECCHHHHHHHHHT
T ss_pred CCEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCccCCC-CCCc-cccccccCChHHHHHHHhhc
Confidence 89999999999999998875 33444455678899999999999999874 211 1111 1223467899999998887
Q ss_pred --CcCCCHHHHHHHHHHHHH
Q 017290 317 --APSMKLKDGLRITYFWIK 334 (374)
Q Consensus 317 --~p~~~~~~~l~~~~~~~~ 334 (374)
.+.++++++|+++++|++
T Consensus 322 ~~~~~~~l~~~l~~~~~~~~ 341 (342)
T 1y1p_A 322 GRPGWRSIEESIKDLVGSET 341 (342)
T ss_dssp TCCSCCCHHHHHHHHHCCSC
T ss_pred ccCCcCCHHHHHHHHHHHhh
Confidence 466799999999999874
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=293.93 Aligned_cols=296 Identities=17% Similarity=0.149 Sum_probs=215.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc------ccc--cccceeEEecccchhhHhhhccCCCEEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM------TED--MFCHEFHLVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~--~~~i~~~~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
++|+||||||+||||++++++|+++||+|++++|+..... ... ..+++++.+|++|.+.+.++++++|+|||
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 83 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH 83 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence 5689999999999999999999999999999999865311 011 12467899999999999999999999999
Q ss_pred cccccCCcccccCCc-ceehhhhHHHHHHHHHHHHhCC-CCeEEEeeccc-ccCCCcccccccCCCCCCCCCC-------
Q 017290 97 LAADMGGMGFIQSNH-SVIMYNNTMISFNMLEASRISG-VKRFFYASSAC-IYPEFKQLETNVSLKESDAWPA------- 166 (374)
Q Consensus 97 ~a~~~~~~~~~~~~~-~~~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~-vy~~~~~~~~~~~~~e~~~~~~------- 166 (374)
+|+... +...++ ...+++|+.++.+++++|++.+ ++||||+||.+ +|+.... ..+++|+++.+.
T Consensus 84 ~A~~~~---~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~---~~~~~E~~~~~~~~~~~~~ 157 (337)
T 2c29_D 84 VATPMD---FESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQ---LPVYDESCWSDMEFCRAKK 157 (337)
T ss_dssp CCCCCC---SSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSC---CSEECTTCCCCHHHHHHHC
T ss_pred eccccC---CCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCC---CcccCcccCCchhhhcccC
Confidence 998642 222233 3478899999999999999887 89999999987 4443211 113566543221
Q ss_pred CCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHH---HhccCCceEeeCCCcccccce
Q 017290 167 EPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRK---ALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i 243 (374)
.+.+.|+.+|..+|.+++.+...++++++++||+.+|||..... .. ..+.. .+. +... .++.. ...+|+
T Consensus 158 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~----~~-~~~~~~~~~~~-g~~~-~~~~~-~~~~~i 229 (337)
T 2c29_D 158 MTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSS----MP-PSLITALSPIT-GNEA-HYSII-RQGQFV 229 (337)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSS----CC-HHHHHHTHHHH-TCGG-GHHHH-TEEEEE
T ss_pred CccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC----CC-chHHHHHHHHc-CCCc-ccccc-CCCCEE
Confidence 14457999999999999999877899999999999999974321 11 11111 122 2211 11111 234599
Q ss_pred eHHHHHHHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCC-CCCcccCCCCCCCcccccchHHHHHhcCCCcCCC
Q 017290 244 FIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDK-KLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMK 321 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~ 321 (374)
|++|+|++++.+++++ .++.|+++ +..+++.|+++.+.+.++. +.+....+.........+|++|+ ++|||+|+++
T Consensus 230 ~v~Dva~a~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lG~~p~~~ 307 (337)
T 2c29_D 230 HLDDLCNAHIYLFENPKAEGRYICS-SHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKL-TDLGFEFKYS 307 (337)
T ss_dssp EHHHHHHHHHHHHHCTTCCEEEEEC-CEEEEHHHHHHHHHHHCTTSCCCSCCTTCCTTCCCCEECCHHH-HHHTCCCCCC
T ss_pred EHHHHHHHHHHHhcCcccCceEEEe-CCCCCHHHHHHHHHHHCCCccCCCCCCcccCCCccccccHHHH-HHcCCCcCCC
Confidence 9999999999999875 35677765 4668999999999988742 23222112122334566899999 7899999999
Q ss_pred HHHHHHHHHHHHHHh
Q 017290 322 LKDGLRITYFWIKEQ 336 (374)
Q Consensus 322 ~~~~l~~~~~~~~~~ 336 (374)
++++|+++++|+++.
T Consensus 308 l~e~l~~~~~~~~~~ 322 (337)
T 2c29_D 308 LEDMFTGAVDTCRAK 322 (337)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHc
Confidence 999999999999764
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=283.88 Aligned_cols=298 Identities=20% Similarity=0.207 Sum_probs=210.8
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeC-CCCcccc------cc--cccceeEEecccchhhHhhhccCCCEEEE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDW-KKNEHMT------ED--MFCHEFHLVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~------~~--~~~i~~~~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
+|+||||||+||||++++++|+++||+|++++| ++..... .. ..+++++.+|++|.+.+.++++++|+|||
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 478999999999999999999999999999998 5422100 00 12467888999999999999999999999
Q ss_pred cccccCCcccccCCc-ceehhhhHHHHHHHHHHHHhC-CCCeEEEeecccccCCCcccccccCCCCCCCCC------CCC
Q 017290 97 LAADMGGMGFIQSNH-SVIMYNNTMISFNMLEASRIS-GVKRFFYASSACIYPEFKQLETNVSLKESDAWP------AEP 168 (374)
Q Consensus 97 ~a~~~~~~~~~~~~~-~~~~~~n~~~~~~ll~a~~~~-~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~------~~~ 168 (374)
+|+... ....++ ...+++|+.++.+++++|.+. ++++|||+||.+++..... ...+++|+++.+ ..|
T Consensus 81 ~A~~~~---~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~--~~~~~~e~~~~~~~~~~~~~p 155 (322)
T 2p4h_X 81 TASPID---FAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGK--DKDVLDESDWSDVDLLRSVKP 155 (322)
T ss_dssp CCCCC-----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSS--CCSEECTTCCCCHHHHHHHCC
T ss_pred cCCccc---CCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCC--CCeecCCccccchhhhcccCc
Confidence 997531 222232 347889999999999999988 7899999999875432211 011455654211 123
Q ss_pred CC-chHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHH
Q 017290 169 QD-AYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247 (374)
Q Consensus 169 ~~-~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 247 (374)
.. .|+.+|..+|.+++.+...++++++++||+.+||+..... ..... ..+...+. +....+ +. ..++++|++|
T Consensus 156 ~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~-~~~~~-~~~~~~~~-g~~~~~-~~--~~~~~i~v~D 229 (322)
T 2p4h_X 156 FGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPK-LPDSI-EKALVLVL-GKKEQI-GV--TRFHMVHVDD 229 (322)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSS-CCHHH-HHHTHHHH-SCGGGC-CE--EEEEEEEHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCC-CCchH-HHHHHHHh-CCCccC-cC--CCcCEEEHHH
Confidence 33 6999999999999999887899999999999999964321 01111 11112222 222222 22 2348999999
Q ss_pred HHHHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCC-CCCccc-CCCCCCCcccccchHHHHHhcCCCcCCCHHH
Q 017290 248 CVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDK-KLPIHH-IPGPEGVRGRNSDNTLIKEKLGWAPSMKLKD 324 (374)
Q Consensus 248 va~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~-~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~ 324 (374)
+|++++.+++++ ..+.|| ++++.+++.|+++.+.+..+. +.+... ...........+|++|+ ++|||+|++++++
T Consensus 230 va~a~~~~~~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lG~~p~~~~~~ 307 (322)
T 2p4h_X 230 VARAHIYLLENSVPGGRYN-CSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGARLPDLNTKKL-VDAGFDFKYTIED 307 (322)
T ss_dssp HHHHHHHHHHSCCCCEEEE-CCCEEEEHHHHHHHHHHHCTTSCCCCTTTTTTCCCEECCEECCHHH-HHTTCCCCCCHHH
T ss_pred HHHHHHHHhhCcCCCCCEE-EcCCCCCHHHHHHHHHHhCCCCCCCCCccccCCCCCcceecccHHH-HHhCCccCCCHHH
Confidence 999999999765 345688 557889999999999987742 222110 11111114567899999 5699999999999
Q ss_pred HHHHHHHHHHHh
Q 017290 325 GLRITYFWIKEQ 336 (374)
Q Consensus 325 ~l~~~~~~~~~~ 336 (374)
+|+++++|+++.
T Consensus 308 ~l~~~~~~~~~~ 319 (322)
T 2p4h_X 308 MFDDAIQCCKEK 319 (322)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999999764
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=274.65 Aligned_cols=274 Identities=14% Similarity=0.069 Sum_probs=207.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCC---
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGG--- 103 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~--- 103 (374)
|||||||||||||++|+++|+++||+|++++|++... -+..| +.....++++|+|||+|+....
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~---------~~~~~----~~~~~~l~~~d~vihla~~~i~~~~ 67 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG---------RITWD----ELAASGLPSCDAAVNLAGENILNPL 67 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------EEEHH----HHHHHCCCSCSEEEECCCCCSSCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC---------eeecc----hhhHhhccCCCEEEEeccCcccchh
Confidence 7899999999999999999999999999999986431 11222 2234567899999999985321
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCC--eEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHH
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVK--RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEE 181 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~--~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~ 181 (374)
..+........+..|+.++.+|++++++.+.+ +||+.||.++|+..... +++|++ +..+.+.|+..+...|.
T Consensus 68 ~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~----~~~E~~--p~~~~~~~~~~~~~~e~ 141 (298)
T 4b4o_A 68 RRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTA----EYDEDS--PGGDFDFFSNLVTKWEA 141 (298)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSC----CBCTTC--CCSCSSHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCC----cccccC--CccccchhHHHHHHHHH
Confidence 11223334556788999999999999988754 68999999999976543 567776 66777888888887776
Q ss_pred HHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC-C
Q 017290 182 LCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-F 260 (374)
Q Consensus 182 ~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~-~ 260 (374)
.. +....+++++++|++.|||+++ ..+..++... ..+. ...++++++.++|||++|+|+++..+++++ .
T Consensus 142 ~~--~~~~~~~~~~~~r~~~v~g~~~------~~~~~~~~~~-~~~~-~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~ 211 (298)
T 4b4o_A 142 AA--RLPGDSTRQVVVRSGVVLGRGG------GAMGHMLLPF-RLGL-GGPIGSGHQFFPWIHIGDLAGILTHALEANHV 211 (298)
T ss_dssp HH--CCSSSSSEEEEEEECEEECTTS------HHHHHHHHHH-HTTC-CCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTC
T ss_pred HH--HhhccCCceeeeeeeeEEcCCC------CchhHHHHHH-hcCC-cceecccCceeecCcHHHHHHHHHHHHhCCCC
Confidence 53 3344689999999999999964 2344444333 3233 334589999999999999999999999886 5
Q ss_pred CCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCC-------C-----CcccccchHHHHHhcCCCcCC-CHHHHHH
Q 017290 261 REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE-------G-----VRGRNSDNTLIKEKLGWAPSM-KLKDGLR 327 (374)
Q Consensus 261 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-------~-----~~~~~~d~~k~~~~lg~~p~~-~~~~~l~ 327 (374)
.++||+++++++|+.|+++.+++.+|++.. ..+|... . .....+++.|++ ++||+++| +++++|+
T Consensus 212 ~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~-~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~-~~Gf~f~yp~l~~al~ 289 (298)
T 4b4o_A 212 HGVLNGVAPSSATNAEFAQTFGAALGRRAF-IPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTL-ATGYQYSFPELGAALK 289 (298)
T ss_dssp CEEEEESCSCCCBHHHHHHHHHHHHTCCCC-CCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHH-HTTCCCSCCSHHHHHH
T ss_pred CCeEEEECCCccCHHHHHHHHHHHhCcCCc-ccCCHHHHHHHhcchhHHHhhCCCEEcHHHHH-HCCCCCCCCCHHHHHH
Confidence 789999999999999999999999998753 2233210 0 123456778887 58999998 6999999
Q ss_pred HHHH
Q 017290 328 ITYF 331 (374)
Q Consensus 328 ~~~~ 331 (374)
++++
T Consensus 290 ~l~~ 293 (298)
T 4b4o_A 290 EIAE 293 (298)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9887
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-36 Score=267.69 Aligned_cols=264 Identities=16% Similarity=0.121 Sum_probs=211.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccC--CCEEEEcccccCCc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKG--VDHVFNLAADMGGM 104 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~--~d~vi~~a~~~~~~ 104 (374)
|+||||||+|+||+++++.|++ |++|++++|++... .+ +.+|+++.+.+.+++++ +|+|||+|+....
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~-----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~- 70 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ-----GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDV- 70 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT-----TC---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCH-
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC-----CC---ceeccCCHHHHHHHHHhcCCCEEEECCcccCh-
Confidence 5899999999999999999995 89999999987431 12 78999999999998875 9999999996431
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
.....+.+..+++|+.++.+++++|++.++ +|||+||..+|+.... +++|++ +..|.+.|+.+|..+|.+++
T Consensus 71 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~-----~~~e~~--~~~~~~~Y~~sK~~~e~~~~ 142 (273)
T 2ggs_A 71 DKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKG-----NYKEED--IPNPINYYGLSKLLGETFAL 142 (273)
T ss_dssp HHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSC-----SBCTTS--CCCCSSHHHHHHHHHHHHHC
T ss_pred hhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCC-----CcCCCC--CCCCCCHHHHHHHHHHHHHh
Confidence 122345677889999999999999999887 9999999999976532 577776 56778899999999999987
Q ss_pred HHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCCCCcE
Q 017290 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPV 264 (374)
Q Consensus 185 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~~~~~ 264 (374)
. ++++++||+.+||+. .....++.. +..+..+.+.++ .++++|++|+|++++.+++++.+++|
T Consensus 143 ~------~~~~~iR~~~v~G~~-------~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~~g~~ 205 (273)
T 2ggs_A 143 Q------DDSLIIRTSGIFRNK-------GFPIYVYKT-LKEGKTVFAFKG---YYSPISARKLASAILELLELRKTGII 205 (273)
T ss_dssp C------TTCEEEEECCCBSSS-------SHHHHHHHH-HHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTCCEEE
T ss_pred C------CCeEEEecccccccc-------HHHHHHHHH-HHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCcCCeE
Confidence 6 578999999999832 233333333 334556666543 78999999999999999988777899
Q ss_pred EecCCCccCHHHHHHHHHHhcCCCCCcccCC-----CCCCCcccccchHHHHHhcCCCc-CCCHHHHH
Q 017290 265 NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-----GPEGVRGRNSDNTLIKEKLGWAP-SMKLKDGL 326 (374)
Q Consensus 265 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~-----~~~~~~~~~~d~~k~~~~lg~~p-~~~~~~~l 326 (374)
|+++ +.+++.|+++.+.+.+|.+.+....+ .+.......+|++|++++|||+| .+++++++
T Consensus 206 ~i~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~ 272 (273)
T 2ggs_A 206 HVAG-ERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV 272 (273)
T ss_dssp ECCC-CCEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred EECC-CcccHHHHHHHHHHHhCCChhhcccccccccccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence 9998 99999999999999999876543211 11223457899999999999999 67888764
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-36 Score=291.21 Aligned_cols=281 Identities=16% Similarity=0.150 Sum_probs=209.0
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCcc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMG 105 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~ 105 (374)
+|+||||||+||||++|++.|+++||+|++++|++... ..+.+|+.+ .+..+++++|+|||||+......
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------~~v~~d~~~--~~~~~l~~~D~Vih~A~~~~~~~ 216 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------GKRFWDPLN--PASDLLDGADVLVHLAGEPIFGR 216 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------TCEECCTTS--CCTTTTTTCSEEEECCCC-----
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------cceeecccc--hhHHhcCCCCEEEECCCCccccc
Confidence 78999999999999999999999999999999987642 235677764 34667789999999999754323
Q ss_pred cccCCcceehhhhHHHHHHHHHH-HHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 106 FIQSNHSVIMYNNTMISFNMLEA-SRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 106 ~~~~~~~~~~~~n~~~~~~ll~a-~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
+........+++|+.++.+|+++ +++.++++|||+||.++|+.... +.+++|++ +. +.+.|+.+|...|.++.
T Consensus 217 ~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~---~~~~~E~~--~~-~~~~y~~~~~~~E~~~~ 290 (516)
T 3oh8_A 217 FNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRG---DEILTEES--ES-GDDFLAEVCRDWEHATA 290 (516)
T ss_dssp CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEE---EEEECTTS--CC-CSSHHHHHHHHHHHTTH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCC---CCccCCCC--CC-CcChHHHHHHHHHHHHH
Confidence 44455667889999999999999 67778899999999999983211 12577776 33 77889999999998865
Q ss_pred HHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC-CCCc
Q 017290 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-FREP 263 (374)
Q Consensus 185 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~-~~~~ 263 (374)
. ....+++++++||+.+||+.. ..+..++. .+..+.. .+++++++.++++|++|+|++++.+++++ .+++
T Consensus 291 ~-~~~~gi~~~ilRp~~v~Gp~~------~~~~~~~~-~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~g~ 361 (516)
T 3oh8_A 291 P-ASDAGKRVAFIRTGVALSGRG------GMLPLLKT-LFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGP 361 (516)
T ss_dssp H-HHHTTCEEEEEEECEEEBTTB------SHHHHHHH-TTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCTTCCEE
T ss_pred H-HHhCCCCEEEEEeeEEECCCC------ChHHHHHH-HHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCcccCCc
Confidence 4 445689999999999999863 23433333 3333332 35578889999999999999999999876 5789
Q ss_pred EEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCC-------------CcccccchHHHHHhcCCCcCCC-HHHHHHHH
Q 017290 264 VNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-------------VRGRNSDNTLIKEKLGWAPSMK-LKDGLRIT 329 (374)
Q Consensus 264 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------------~~~~~~d~~k~~~~lg~~p~~~-~~~~l~~~ 329 (374)
||+++++.+++.|+++.+.+.+|.+. ...+|.... .....++++|++ ++||.|+++ ++++|+++
T Consensus 362 ~ni~~~~~~s~~el~~~i~~~~g~~~-~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~-~lG~~~~~~~l~e~l~~~ 439 (516)
T 3oh8_A 362 INAVAPNPVSNADMTKILATSMHRPA-FIQIPSLGPKILLGSQGAEELALASQRTAPAALE-NLSHTFRYTDIGAAIAHE 439 (516)
T ss_dssp EEESCSCCEEHHHHHHHTTC----------------------CCGGGGGGCEEEECCHHHH-HTTCCCSCSSHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCCC-CCCCCHHHHHHHhCCchhHHHhhcCCeechHHHH-HCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999865 222332110 122345778888 589999987 99999999
Q ss_pred HHHH
Q 017290 330 YFWI 333 (374)
Q Consensus 330 ~~~~ 333 (374)
++..
T Consensus 440 l~~~ 443 (516)
T 3oh8_A 440 LGYE 443 (516)
T ss_dssp HTCC
T ss_pred hCcc
Confidence 8754
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=267.34 Aligned_cols=257 Identities=18% Similarity=0.126 Sum_probs=205.7
Q ss_pred CeEEEEcCcchhHHHHHHHHHhC--CCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCc
Q 017290 27 LRISVTGAGGFIASHIARRLKSE--GHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGM 104 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~ 104 (374)
|+||||||+||||+++++.|+++ |++|++++|++.........+++++.+|++|.+.+.++++++|+|||+|+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~--- 77 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPH--- 77 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCC---
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCC---
Confidence 57999999999999999999998 9999999998765432223467899999999999999999999999999842
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
. . ...|+.++.+++++|++.+++||||+||.++|.. + ..|+.+|..+|++++
T Consensus 78 -~---~----~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~----------------~----~~y~~~K~~~E~~~~ 129 (287)
T 2jl1_A 78 -Y---D----NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEES----------------I----IPLAHVHLATEYAIR 129 (287)
T ss_dssp -S---C----HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC----------------C----STHHHHHHHHHHHHH
T ss_pred -c---C----chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC----------------C----CchHHHHHHHHHHHH
Confidence 1 1 1569999999999999999999999999887520 1 379999999999987
Q ss_pred HHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC--CCC
Q 017290 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FRE 262 (374)
Q Consensus 185 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~--~~~ 262 (374)
. .+++++++||+.++|+.. ...+ ...+..+. .. ...+++.++++|++|+|++++.+++++ .++
T Consensus 130 ~----~~~~~~ilrp~~~~~~~~-----~~~~----~~~~~~~~-~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~ 194 (287)
T 2jl1_A 130 T----TNIPYTFLRNALYTDFFV-----NEGL----RASTESGA-IV-TNAGSGIVNSVTRNELALAAATVLTEEGHENK 194 (287)
T ss_dssp H----TTCCEEEEEECCBHHHHS-----SGGG----HHHHHHTE-EE-ESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTE
T ss_pred H----cCCCeEEEECCEeccccc-----hhhH----HHHhhCCc-ee-ccCCCCccCccCHHHHHHHHHHHhcCCCCCCc
Confidence 5 689999999999887631 1122 22232232 22 355677899999999999999999875 467
Q ss_pred cEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCC----------C---------------CcccccchHHHHHhcCCC
Q 017290 263 PVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE----------G---------------VRGRNSDNTLIKEKLGWA 317 (374)
Q Consensus 263 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----------~---------------~~~~~~d~~k~~~~lg~~ 317 (374)
+||+++++.+|+.|+++.+.+.+|.+.++..+|... . ......|++++++.||
T Consensus 195 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG-- 272 (287)
T 2jl1_A 195 TYNLVSNQPWTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG-- 272 (287)
T ss_dssp EEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS--
T ss_pred EEEecCCCcCCHHHHHHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC--
Confidence 999999999999999999999999987766555310 0 0234567889999999
Q ss_pred cCCCHHHHHHHHHH
Q 017290 318 PSMKLKDGLRITYF 331 (374)
Q Consensus 318 p~~~~~~~l~~~~~ 331 (374)
|.++++++|+++++
T Consensus 273 ~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 273 SLTPLKETVKQALK 286 (287)
T ss_dssp SCCCHHHHHHHHHT
T ss_pred CCCCHHHHHHHHhc
Confidence 66899999999875
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=274.32 Aligned_cols=303 Identities=16% Similarity=0.157 Sum_probs=223.8
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc------------------ccccccceeEEecccchhhH
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM------------------TEDMFCHEFHLVDLRVMDNC 84 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------------~~~~~~i~~~~~dl~~~~~~ 84 (374)
...+|+||||||+||||++++++|++.|++|++++|++.... .....++.++.+|+.+.+.+
T Consensus 66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 145 (427)
T 4f6c_A 66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 145 (427)
T ss_dssp CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence 346789999999999999999999999999999999976210 01124678999999998888
Q ss_pred hhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcc-cccccCCCCCCC
Q 017290 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQ-LETNVSLKESDA 163 (374)
Q Consensus 85 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~-~~~~~~~~e~~~ 163 (374)
. .+.++|+|||||+... ...+....+++|+.++.+++++|.+ ++++|||+||.++ |.... .+.+.+++|+++
T Consensus 146 ~-~~~~~d~Vih~A~~~~----~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~ 218 (427)
T 4f6c_A 146 V-LPENMDTIIHAGARTD----HFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADV 218 (427)
T ss_dssp C-CSSCCSEEEECCCCC-----------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCS
T ss_pred C-CcCCCCEEEECCcccC----CCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCcccccccc
Confidence 7 7789999999999753 2345677889999999999999999 7789999999999 44221 122336777774
Q ss_pred C-CCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCC----CCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 164 W-PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG----MEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 164 ~-~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
. +..+.+.|+.+|..+|.+++.+.+ .+++++++||+.|||+...... ....+..++..... ...++. +.++.
T Consensus 219 ~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~ 295 (427)
T 4f6c_A 219 YKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQ-LDCIGV-SMAEM 295 (427)
T ss_dssp CSSCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHH-SSEEEH-HHHTC
T ss_pred ccCCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHh-cCCCCC-ccccc
Confidence 2 145789999999999999999865 6899999999999999754321 11235566666554 344443 34577
Q ss_pred cccceeHHHHHHHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCC-------------------C
Q 017290 239 TRSFTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP-------------------E 298 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-------------------~ 298 (374)
.++++|++|+|++++.++..+ .+++||+++++++++.|+++.+.+ ++ .+....+.+ .
T Consensus 296 ~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 372 (427)
T 4f6c_A 296 PVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE--IELVSDESFNEILQKQDMYETIGLTSVDR 372 (427)
T ss_dssp EECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC--CEEECHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred eEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC--CcccCHHHHHHHHHhcCchhhhhhhhccc
Confidence 899999999999999999877 689999999999999999999998 55 222111110 0
Q ss_pred CCcccccchHHHH---HhcCCCcCCCHHHHHHHHHHHHHHhhh
Q 017290 299 GVRGRNSDNTLIK---EKLGWAPSMKLKDGLRITYFWIKEQIE 338 (374)
Q Consensus 299 ~~~~~~~d~~k~~---~~lg~~p~~~~~~~l~~~~~~~~~~~~ 338 (374)
......+|+.+.. +.+||.+...-++.++++++|+++...
T Consensus 373 ~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~~~ 415 (427)
T 4f6c_A 373 EQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTIFN 415 (427)
T ss_dssp TSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred cCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 1123456776665 557998765566789999999988754
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=250.32 Aligned_cols=223 Identities=16% Similarity=0.101 Sum_probs=177.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGM 104 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~ 104 (374)
.||+||||||+|+||+++++.|+++|++|++++|++....... .+++++.+|++|.+.+.++++++|+|||+|+...
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~-- 79 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN-EHLKVKKADVSSLDEVCEVCKGADAVISAFNPGW-- 79 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC-TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC----
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc-CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCC--
Confidence 4689999999999999999999999999999999976544332 5688999999999999999999999999998531
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
.....+++|+.++.++++++++.++++|||+||.++|..... ...+++ +..|.+.|+.+|..+|.+++
T Consensus 80 -----~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~-----~~~~~~--~~~p~~~Y~~sK~~~e~~~~ 147 (227)
T 3dhn_A 80 -----NNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPG-----LRLMDS--GEVPENILPGVKALGEFYLN 147 (227)
T ss_dssp ---------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETT-----EEGGGT--TCSCGGGHHHHHHHHHHHHH
T ss_pred -----CChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCC-----CccccC--CcchHHHHHHHHHHHHHHHH
Confidence 222378889999999999999999999999999988765432 123333 55688899999999999999
Q ss_pred HHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC--CCC
Q 017290 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FRE 262 (374)
Q Consensus 185 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~--~~~ 262 (374)
.+.++.+++++++||+.+||++..... . .. +....+. .++ .++++|++|+|++++.+++++ .++
T Consensus 148 ~~~~~~~~~~~ilrp~~v~g~~~~~~~---~--------~~-~~~~~~~-~~~-~~~~i~~~Dva~ai~~~l~~~~~~g~ 213 (227)
T 3dhn_A 148 FLMKEKEIDWVFFSPAADMRPGVRTGR---Y--------RL-GKDDMIV-DIV-GNSHISVEDYAAAMIDELEHPKHHQE 213 (227)
T ss_dssp TGGGCCSSEEEEEECCSEEESCCCCCC---C--------EE-ESSBCCC-CTT-SCCEEEHHHHHHHHHHHHHSCCCCSE
T ss_pred HHhhccCccEEEEeCCcccCCCccccc---e--------ee-cCCCccc-CCC-CCcEEeHHHHHHHHHHHHhCccccCc
Confidence 998778999999999999999753211 0 01 1222222 222 289999999999999999987 489
Q ss_pred cEEecCCCccCHHH
Q 017290 263 PVNIGSDEMVSMNE 276 (374)
Q Consensus 263 ~~~i~~~~~~s~~e 276 (374)
.|+++++++.+|.+
T Consensus 214 ~~~~~~~~~~~~~~ 227 (227)
T 3dhn_A 214 RFTIGYLEHHHHHH 227 (227)
T ss_dssp EEEEECCSCCC---
T ss_pred EEEEEeehhcccCC
Confidence 99999999998863
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=259.89 Aligned_cols=257 Identities=15% Similarity=0.145 Sum_probs=200.2
Q ss_pred eEEEEcCcchhHHHHHHHHHhC--CCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCcc
Q 017290 28 RISVTGAGGFIASHIARRLKSE--GHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMG 105 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~ 105 (374)
+||||||+|+||+++++.|+++ |++|++++|++.........+++++.+|++|.+.+.++++++|+|||+|+...
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~--- 77 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEV--- 77 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc---
Confidence 5899999999999999999998 99999999987654332234678999999999999999999999999998421
Q ss_pred cccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHH
Q 017290 106 FIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKH 185 (374)
Q Consensus 106 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~ 185 (374)
..|+.++.+++++|++.++++|||+||.++|.. + ..|+.+|..+|.+++.
T Consensus 78 ----------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~----------------~----~~y~~sK~~~e~~~~~ 127 (286)
T 2zcu_A 78 ----------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTS----------------P----LGLADEHIETEKMLAD 127 (286)
T ss_dssp --------------CHHHHHHHHHHHHTCCEEEEEEETTTTTC----------------C----STTHHHHHHHHHHHHH
T ss_pred ----------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC----------------c----chhHHHHHHHHHHHHH
Confidence 137889999999999999999999999887610 1 3799999999999876
Q ss_pred HHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC--CCCc
Q 017290 186 YTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FREP 263 (374)
Q Consensus 186 ~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~--~~~~ 263 (374)
.+++++++||+.++++.. .++...+..+ .+. .+.+++.++++|++|+|++++.+++++ .+++
T Consensus 128 ----~~~~~~ilrp~~~~~~~~----------~~~~~~~~~~-~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~ 191 (286)
T 2zcu_A 128 ----SGIVYTLLRNGWYSENYL----------ASAPAALEHG-VFI-GAAGDGKIASATRADYAAAAARVISEAGHEGKV 191 (286)
T ss_dssp ----HCSEEEEEEECCBHHHHH----------TTHHHHHHHT-EEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCE
T ss_pred ----cCCCeEEEeChHHhhhhH----------HHhHHhhcCC-cee-ccCCCCccccccHHHHHHHHHHHhcCCCCCCce
Confidence 689999999987766421 1222223222 333 456778899999999999999999875 4789
Q ss_pred EEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCC--------C-C----------------cccccchHHHHHhcCCCc
Q 017290 264 VNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE--------G-V----------------RGRNSDNTLIKEKLGWAP 318 (374)
Q Consensus 264 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~--------~-~----------------~~~~~d~~k~~~~lg~~p 318 (374)
||+++++.+|+.|+++.+.+.+|.+.++..+|... . . .....|++++++.||| |
T Consensus 192 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~-~ 270 (286)
T 2zcu_A 192 YELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGH-P 270 (286)
T ss_dssp EEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTS-C
T ss_pred EEEeCCCcCCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCc-C
Confidence 99999999999999999999999887665555321 0 0 1245678899999997 4
Q ss_pred CCCHHHHHHHHHHHHH
Q 017290 319 SMKLKDGLRITYFWIK 334 (374)
Q Consensus 319 ~~~~~~~l~~~~~~~~ 334 (374)
.++++++|+++++|+.
T Consensus 271 ~~~~~e~l~~~~~~~~ 286 (286)
T 2zcu_A 271 TTTLAESVSHLFNVNN 286 (286)
T ss_dssp CCCHHHHHHGGGC---
T ss_pred CCCHHHHHHHHHhhcC
Confidence 5799999999998874
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-34 Score=278.22 Aligned_cols=302 Identities=16% Similarity=0.160 Sum_probs=225.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcc------------------cccccccceeEEecccchhhHhh
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH------------------MTEDMFCHEFHLVDLRVMDNCLK 86 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------------~~~~~~~i~~~~~dl~~~~~~~~ 86 (374)
.+|+|||||||||||++|+++|++.|++|++++|++... ......+++++.+|+.+.+.+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 568999999999999999999999999999999987621 0111246899999999988777
Q ss_pred hccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcc-cccccCCCCCCCC-
Q 017290 87 VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQ-LETNVSLKESDAW- 164 (374)
Q Consensus 87 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~-~~~~~~~~e~~~~- 164 (374)
+..++|+|||||+... ...+....+.+|+.++.+++++|++ +.++|||+||.++ |.... ...+.+++|+++.
T Consensus 228 ~~~~~D~Vih~Aa~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~ 301 (508)
T 4f6l_B 228 LPENMDTIIHAGARTD----HFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYK 301 (508)
T ss_dssp CSSCCSEEEECCCC------------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCS
T ss_pred CccCCCEEEECCceec----CCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh-ccCCccCCcCcccccccccc
Confidence 6789999999999753 2345677889999999999999999 6689999999999 43221 1123367777642
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCC---C-CCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWK---G-MEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
+..+.+.|+.+|..+|.+++.+.+ .+++++++||+.|||+..... + ....+..++..... ...++. +.++..+
T Consensus 302 ~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~-~~g~~~~ 378 (508)
T 4f6l_B 302 GQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQ-LDCIGV-SMAEMPV 378 (508)
T ss_dssp SBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTT-CSEEET-TGGGSEE
T ss_pred cccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHH-cCCCCC-CccCceE
Confidence 134789999999999999999865 699999999999999975432 1 12335566666544 343433 4467899
Q ss_pred cceeHHHHHHHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCC-------------------CCC
Q 017290 241 SFTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP-------------------EGV 300 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-------------------~~~ 300 (374)
+++|++|+|++++.++.++ .+++||+++++++++.|+++.+.+.. .+....+.+ ...
T Consensus 379 ~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~---~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~ 455 (508)
T 4f6l_B 379 DFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE---IELVSDESFNEILQKQDMYETIGLTSVDREQ 455 (508)
T ss_dssp ECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC---CEEECHHHHHHHHHTTCCHHHHHHHHTGGGS
T ss_pred EEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC---CcccCHHHHHHHHHhcCCccchhcccccccC
Confidence 9999999999999999877 68999999999999999999999765 221111110 011
Q ss_pred cccccchHHHH---HhcCCCcCCCHHHHHHHHHHHHHHhhhh
Q 017290 301 RGRNSDNTLIK---EKLGWAPSMKLKDGLRITYFWIKEQIEK 339 (374)
Q Consensus 301 ~~~~~d~~k~~---~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 339 (374)
....+|+.+.. +++||.+...-++.++++++|+++...+
T Consensus 456 ~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~~~~ 497 (508)
T 4f6l_B 456 QLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTIFNK 497 (508)
T ss_dssp EECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHHHC-
T ss_pred cceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 23456666655 4569988766688899999999987543
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=271.57 Aligned_cols=257 Identities=13% Similarity=0.061 Sum_probs=200.6
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhC---CCEEEEEeCCCCccccc---------------------ccccceeEEec
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSE---GHYIIASDWKKNEHMTE---------------------DMFCHEFHLVD 77 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~---------------------~~~~i~~~~~d 77 (374)
....+|+||||||+||||++++++|++. |++|++++|++...... ...+++++.+|
T Consensus 69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 148 (478)
T 4dqv_A 69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD 148 (478)
T ss_dssp CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence 3456899999999999999999999998 89999999987632100 11367899999
Q ss_pred cc------chhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcc
Q 017290 78 LR------VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQ 151 (374)
Q Consensus 78 l~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~ 151 (374)
++ +.+.+..+++++|+|||||+... . .+....+.+|+.++.+++++|.+.++++|||+||.++|+....
T Consensus 149 l~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~---~--~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~ 223 (478)
T 4dqv_A 149 KSEPDLGLDQPMWRRLAETVDLIVDSAAMVN---A--FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEP 223 (478)
T ss_dssp TTSGGGGCCHHHHHHHHHHCCEEEECCSSCS---B--SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCT
T ss_pred CCCcccCCCHHHHHHHHcCCCEEEECccccC---C--cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCC
Confidence 98 55678888889999999999754 2 5667889999999999999999999999999999999987543
Q ss_pred cccccCCCCCCCCCCCCC-----------CchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCC--CCCCCCcHHH
Q 017290 152 LETNVSLKESDAWPAEPQ-----------DAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGT--WKGMEKAPAA 218 (374)
Q Consensus 152 ~~~~~~~~e~~~~~~~~~-----------~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~--~~~~~~~~~~ 218 (374)
. +++|++ +..|. +.|+.+|..+|.+++.++.+.+++++++||+.|||+... ..+....+..
T Consensus 224 ~----~~~E~~--~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~ 297 (478)
T 4dqv_A 224 S----AFTEDA--DIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTR 297 (478)
T ss_dssp T----TCCSSS--CHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHH
T ss_pred C----CcCCcc--cccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHH
Confidence 2 466665 22222 459999999999999999888999999999999998531 1123445556
Q ss_pred HHHHHhccCCc-eEeeCC------CcccccceeHHHHHHHHHhhhcc------CCCCcEEecCCCc--cCHHHHHHHHHH
Q 017290 219 FCRKALTSTDK-FEMWGD------GLQTRSFTFIDECVEGVLRLTKS------DFREPVNIGSDEM--VSMNEMAEIVLS 283 (374)
Q Consensus 219 ~~~~~~~~~~~-~~~~~~------~~~~~~~i~~~Dva~~i~~~~~~------~~~~~~~i~~~~~--~s~~e~~~~i~~ 283 (374)
++......+.. ..+++. ++..++++|++|+|++++.++.+ ..+++||+++++. +++.|+++.+.+
T Consensus 298 l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~ 377 (478)
T 4dqv_A 298 MVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIE 377 (478)
T ss_dssp HHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHH
T ss_pred HHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHH
Confidence 66555443321 111111 25678999999999999998875 2468999999988 999999999999
Q ss_pred hcCCCCC
Q 017290 284 FEDKKLP 290 (374)
Q Consensus 284 ~~g~~~~ 290 (374)
. |.+.+
T Consensus 378 ~-g~~~~ 383 (478)
T 4dqv_A 378 A-GYPIR 383 (478)
T ss_dssp T-TCSCE
T ss_pred c-CCCcc
Confidence 6 66543
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-33 Score=249.19 Aligned_cols=235 Identities=23% Similarity=0.223 Sum_probs=192.4
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCcc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMG 105 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~ 105 (374)
||+||||||+|+||+++++.|++.|++|++++|++..... .+++++.+|++|.+.+.++++++|+|||+|+..
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~---- 74 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAE---AHEEIVACDLADAQAVHDLVKDCDGIIHLGGVS---- 74 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCC---TTEEECCCCTTCHHHHHHHHTTCSEEEECCSCC----
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccC---CCccEEEccCCCHHHHHHHHcCCCEEEECCcCC----
Confidence 5789999999999999999999999999999998754321 356888999999999999999999999999864
Q ss_pred cccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHH
Q 017290 106 FIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKH 185 (374)
Q Consensus 106 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~ 185 (374)
...+....+++|+.++.++++++++.++++|||+||..+|+.... ..+++|++ +..|.+.|+.+|..+|.+++.
T Consensus 75 -~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~---~~~~~E~~--~~~~~~~Y~~sK~~~e~~~~~ 148 (267)
T 3ay3_A 75 -VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPR---TTRIDTEV--PRRPDSLYGLSKCFGEDLASL 148 (267)
T ss_dssp -SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBT---TSCBCTTS--CCCCCSHHHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCC---CCCCCCCC--CCCCCChHHHHHHHHHHHHHH
Confidence 223456678899999999999999999999999999999986432 22578877 667889999999999999999
Q ss_pred HHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC--CCc
Q 017290 186 YTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF--REP 263 (374)
Q Consensus 186 ~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~--~~~ 263 (374)
+....+++++++||+.+|+.. ..+...++++|++|+|++++.+++++. .++
T Consensus 149 ~~~~~gi~~~~lrp~~v~~~~---------------------------~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~ 201 (267)
T 3ay3_A 149 YYHKFDIETLNIRIGSCFPKP---------------------------KDARMMATWLSVDDFMRLMKRAFVAPKLGCTV 201 (267)
T ss_dssp HHHTTCCCEEEEEECBCSSSC---------------------------CSHHHHHHBCCHHHHHHHHHHHHHSSCCCEEE
T ss_pred HHHHcCCCEEEEeceeecCCC---------------------------CCCCeeeccccHHHHHHHHHHHHhCCCCCcee
Confidence 988789999999999999421 012345689999999999999998764 467
Q ss_pred EEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHH
Q 017290 264 VNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYF 331 (374)
Q Consensus 264 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~ 331 (374)
|++.++. .....|..++ +.+||+|.++++++++++.+
T Consensus 202 ~~~~~~~------------------------------~~~~~d~~~~-~~lg~~p~~~~~~~~~~~~~ 238 (267)
T 3ay3_A 202 VYGASAN------------------------------TESWWDNDKS-AFLGWVPQDSSEIWREEIEQ 238 (267)
T ss_dssp EEECCSC------------------------------SSCCBCCGGG-GGGCCCCCCCGGGGHHHHHH
T ss_pred EecCCCc------------------------------cccccCHHHH-HHcCCCCCCCHHHHHHHHHh
Confidence 7765432 1133566666 78999999999999988754
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=263.82 Aligned_cols=252 Identities=18% Similarity=0.267 Sum_probs=202.5
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCcc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMG 105 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~ 105 (374)
|+|||||||||||++|+++|+++|+ +|++++|+ .|.+.+.++++++|+|||+|+...
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------~d~~~l~~~~~~~d~Vih~a~~~~--- 58 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------TKEEELESALLKADFIVHLAGVNR--- 58 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------CCHHHHHHHHHHCSEEEECCCSBC---
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------CCHHHHHHHhccCCEEEECCcCCC---
Confidence 6899999999999999999999998 88887765 567788888889999999999653
Q ss_pred cccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 106 FIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 106 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
..++...++.|+.++.+++++|++.+++ +|||+||.++|+ .+.|+.+|..+|++++
T Consensus 59 --~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~---------------------~~~Y~~sK~~~E~~~~ 115 (369)
T 3st7_A 59 --PEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------------------DNPYGESKLQGEQLLR 115 (369)
T ss_dssp --TTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS---------------------CSHHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC---------------------CCCchHHHHHHHHHHH
Confidence 2356677889999999999999999987 999999998874 3689999999999999
Q ss_pred HHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC---C
Q 017290 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF---R 261 (374)
Q Consensus 185 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~---~ 261 (374)
.++++.+++++++||+.+||+..... ....+..++..... +.++.+ +++++.++++|++|+|++++.+++++. +
T Consensus 116 ~~~~~~g~~~~i~R~~~v~G~~~~~~-~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~ 192 (369)
T 3st7_A 116 EYAEEYGNTVYIYRWPNLFGKWCKPN-YNSVIATFCYKIAR-NEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIEN 192 (369)
T ss_dssp HHHHHHCCCEEEEEECEEECTTCCTT-SSCHHHHHHHHHHT-TCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTCCCEET
T ss_pred HHHHHhCCCEEEEECCceeCCCCCCC-cchHHHHHHHHHHc-CCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCCcccCC
Confidence 99998999999999999999976432 34566666666554 555655 577889999999999999999998873 6
Q ss_pred CcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHH
Q 017290 262 EPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYF 331 (374)
Q Consensus 262 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~ 331 (374)
++||+++++.+|+.|+++.+.+.+|.+.+....+.+. ..........++|.|..+++..++...+
T Consensus 193 ~~~~i~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~-----~~~~~l~~~~l~~~p~~~~~~~l~~~~D 257 (369)
T 3st7_A 193 GVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDN-----LFEKDLYSTYLSYLPSTDFSYPLLMNVD 257 (369)
T ss_dssp TEECCSCCEEEEHHHHHHHHHHHHHHHHHTCCCCTTS-----HHHHHHHHHHHHTSCTTCSCCCCCEEEE
T ss_pred ceEEeCCCCceeHHHHHHHHHHHhCCCcccccCCCCC-----HHHHHHHHHHhcccCCcceeechhhccC
Confidence 8999999999999999999999998764332211111 1122334445899988777666554433
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=258.52 Aligned_cols=276 Identities=16% Similarity=0.125 Sum_probs=203.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc--CCCEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK--GVDHV 94 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~--~~d~v 94 (374)
|.+|+||||||||+||++|++.|++.|++|++++|+++.... ....+++++.+|+.|.+.+.++++ ++|+|
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V 87 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV 87 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence 346899999999999999999999999999999998733211 113478999999999999999999 99999
Q ss_pred EEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchH
Q 017290 95 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 173 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~ 173 (374)
||+++.. |+.++.+++++|++.+ +++||+ | +|+. .++|+. +..|...|+
T Consensus 88 i~~a~~~----------------n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~--------~~~e~~--~~~p~~~y~ 137 (346)
T 3i6i_A 88 VSTVGGE----------------SILDQIALVKAMKAVGTIKRFLP-S---EFGH--------DVNRAD--PVEPGLNMY 137 (346)
T ss_dssp EECCCGG----------------GGGGHHHHHHHHHHHCCCSEEEC-S---CCSS--------CTTTCC--CCTTHHHHH
T ss_pred EECCchh----------------hHHHHHHHHHHHHHcCCceEEee-c---ccCC--------CCCccC--cCCCcchHH
Confidence 9999842 8888999999999999 999986 3 3442 234443 556778999
Q ss_pred HhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHH
Q 017290 174 LEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVL 253 (374)
Q Consensus 174 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~ 253 (374)
.+|..+|+++++ .+++++++||+.++|..... ..... . .......+.++++++..++++|++|+|++++
T Consensus 138 ~sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~~-----~~~~~-~-~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~ 206 (346)
T 3i6i_A 138 REKRRVRQLVEE----SGIPFTYICCNSIASWPYYN-----NIHPS-E-VLPPTDFFQIYGDGNVKAYFVAGTDIGKFTM 206 (346)
T ss_dssp HHHHHHHHHHHH----TTCCBEEEECCEESSCCCSC-----C-------CCCCSSCEEEETTSCCCEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHH----cCCCEEEEEecccccccCcc-----ccccc-c-ccCCCceEEEccCCCceEEecCHHHHHHHHH
Confidence 999999999887 68999999999999975321 11111 1 1223456788899999999999999999999
Q ss_pred hhhccC--CCCcEEecC-CCccCHHHHHHHHHHhcCCCCCcccCCCCCC--------C----------------cccccc
Q 017290 254 RLTKSD--FREPVNIGS-DEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG--------V----------------RGRNSD 306 (374)
Q Consensus 254 ~~~~~~--~~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~--------~----------------~~~~~d 306 (374)
.++.++ .+++|++.+ ++.+|+.|+++.+.+.+|.+.++..++.... . ....++
T Consensus 207 ~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 286 (346)
T 3i6i_A 207 KTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFS 286 (346)
T ss_dssp HHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSC
T ss_pred HHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccc
Confidence 999886 378898874 5899999999999999999887766653211 0 000011
Q ss_pred h-----HHHHHhc-CCCcCCCHHHHHHHHHHHHHHhhhhhh
Q 017290 307 N-----TLIKEKL-GWAPSMKLKDGLRITYFWIKEQIEKEK 341 (374)
Q Consensus 307 ~-----~k~~~~l-g~~p~~~~~~~l~~~~~~~~~~~~~~~ 341 (374)
. .++...+ +++| +++++.|+++++|++++.+..+
T Consensus 287 ~~~~~~~~~~~~~p~~~~-t~~~e~l~~~~~~~~~~~~~~~ 326 (346)
T 3i6i_A 287 IDGPEDVEVTTLYPEDSF-RTVEECFGEYIVKMEEKQPTAD 326 (346)
T ss_dssp CCSTTEEEHHHHSTTCCC-CCHHHHHHHHHCC---------
T ss_pred cCCCCcccHHHhCCCCCc-CcHHHHHHHHHHHhhccccccc
Confidence 1 1233333 4555 5999999999999988765544
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=254.70 Aligned_cols=263 Identities=19% Similarity=0.151 Sum_probs=201.6
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhC-CC-EEEEEeCCCCccccc----ccccceeEEecccchhhHhhhccCCCEEEEc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSE-GH-YIIASDWKKNEHMTE----DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNL 97 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~----~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~ 97 (374)
..+|+||||||+|+||+++++.|++. |+ +|++++|++.+.... ...++.++.+|+.|.+.+.++++++|+|||+
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~ 98 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA 98 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence 35689999999999999999999999 97 999999986532111 1236789999999999999999999999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHH
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 177 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~ 177 (374)
|+.... ...+.++...+++|+.++.+++++|.+.++++||++||..++ .|.+.|+.+|.
T Consensus 99 Aa~~~~-~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~--------------------~p~~~Y~~sK~ 157 (344)
T 2gn4_A 99 AALKHV-PIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA--------------------NPINLYGATKL 157 (344)
T ss_dssp CCCCCH-HHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS--------------------SCCSHHHHHHH
T ss_pred CCCCCC-CchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC--------------------CCccHHHHHHH
Confidence 996531 123345667899999999999999999999999999997543 34578999999
Q ss_pred HHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCC-ceEeeCCCcccccceeHHHHHHHHH
Q 017290 178 ASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTD-KFEMWGDGLQTRSFTFIDECVEGVL 253 (374)
Q Consensus 178 ~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~Dva~~i~ 253 (374)
.+|.+++.+..+ .+++++++||+++||+.. ..+..++.... .+. ++.+. ++...++++|++|+|++++
T Consensus 158 ~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~------~~i~~~~~~~~-~g~~~~~i~-~~~~~r~~i~v~D~a~~v~ 229 (344)
T 2gn4_A 158 CSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG------SVVPFFKKLVQ-NKASEIPIT-DIRMTRFWITLDEGVSFVL 229 (344)
T ss_dssp HHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT------SHHHHHHHHHH-HTCCCEEES-CTTCEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC------CHHHHHHHHHH-cCCCceEEe-CCCeEEeeEEHHHHHHHHH
Confidence 999999998754 579999999999999864 24444544443 455 67664 6778889999999999999
Q ss_pred hhhccCC-CCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCCCcccccchHHHHHhcCCCc
Q 017290 254 RLTKSDF-REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAP 318 (374)
Q Consensus 254 ~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p 318 (374)
.+++++. +++|++.++ .+++.|+++.+.+.++.+. .............++..+.++.++|..
T Consensus 230 ~~l~~~~~g~~~~~~~~-~~s~~el~~~i~~~~~~~~--~~~~~~e~~~e~~~~~~~~~~~~~~~~ 292 (344)
T 2gn4_A 230 KSLKRMHGGEIFVPKIP-SMKMTDLAKALAPNTPTKI--IGIRPGEKLHEVMIPKDESHLALEFED 292 (344)
T ss_dssp HHHHHCCSSCEEEECCC-EEEHHHHHHHHCTTCCEEE--CCCCTTCCSSCEEECGGGGGGEEECSS
T ss_pred HHHhhccCCCEEecCCC-cEEHHHHHHHHHHhCCeeE--cCCCCCccHhhhccCHhHHHhhccCCC
Confidence 9998764 678988765 6999999999987553321 111111112333445555666666654
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.98 E-value=5.9e-31 Score=237.85 Aligned_cols=255 Identities=14% Similarity=0.143 Sum_probs=191.6
Q ss_pred CeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCcc
Q 017290 27 LRISVTGAGGFIASHIARRLKSE-GHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMG 105 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~ 105 (374)
|+||||||||+||+++++.|++. |++|++++|++.+.......+++++.+|++|.+.+.++++++|+|||+++....
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~-- 78 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHP-- 78 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCS--
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCcc--
Confidence 67999999999999999999998 999999999987655555567899999999999999999999999999985321
Q ss_pred cccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHH
Q 017290 106 FIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKH 185 (374)
Q Consensus 106 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~ 185 (374)
...|+.++.+++++|++.+++||||+||.+. .+.. |. .+...+..+|..++
T Consensus 79 ---------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~-------------~~~~-----~~-~~~~~~~~~e~~~~- 129 (289)
T 3e48_A 79 ---------SFKRIPEVENLVYAAKQSGVAHIIFIGYYAD-------------QHNN-----PF-HMSPYFGYASRLLS- 129 (289)
T ss_dssp ---------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCC-------------STTC-----CS-TTHHHHHHHHHHHH-
T ss_pred ---------chhhHHHHHHHHHHHHHcCCCEEEEEcccCC-------------CCCC-----CC-ccchhHHHHHHHHH-
Confidence 1348899999999999999999999999532 1111 10 11222234444444
Q ss_pred HHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC--CCc
Q 017290 186 YTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF--REP 263 (374)
Q Consensus 186 ~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~--~~~ 263 (374)
..+++++++||+.+||+. ..++......+ ...++.++..++++|++|+|++++.++.++. +++
T Consensus 130 ---~~g~~~~ilrp~~~~~~~----------~~~~~~~~~~~--~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~ 194 (289)
T 3e48_A 130 ---TSGIDYTYVRMAMYMDPL----------KPYLPELMNMH--KLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKR 194 (289)
T ss_dssp ---HHCCEEEEEEECEESTTH----------HHHHHHHHHHT--EECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCE
T ss_pred ---HcCCCEEEEecccccccc----------HHHHHHHHHCC--CEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCce
Confidence 479999999999999863 12333333322 2334567888999999999999999998864 789
Q ss_pred EEecCCCccCHHHHHHHHHHhcCCCCCcccCCCC---------CCC-------------cccccchHHHHHhcCCCcCCC
Q 017290 264 VNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP---------EGV-------------RGRNSDNTLIKEKLGWAPSMK 321 (374)
Q Consensus 264 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~---------~~~-------------~~~~~d~~k~~~~lg~~p~~~ 321 (374)
|+++ ++.+|+.|+++.+.+.+|++..+..++.. ... .....+...+++.+|+.|+ +
T Consensus 195 ~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~-~ 272 (289)
T 3e48_A 195 YLLS-GYSYDMKELAAILSEASGTEIKYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQ-T 272 (289)
T ss_dssp EEEC-CEEEEHHHHHHHHHHHHTSCCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCC-C
T ss_pred EEeC-CCcCCHHHHHHHHHHHHCCceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCC-C
Confidence 9999 99999999999999999998766655531 110 1112344566778898885 7
Q ss_pred HHHHHHHH
Q 017290 322 LKDGLRIT 329 (374)
Q Consensus 322 ~~~~l~~~ 329 (374)
+++.+++.
T Consensus 273 ~~~~~~~~ 280 (289)
T 3e48_A 273 LQSFLQEN 280 (289)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHHH
Confidence 77666543
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=234.26 Aligned_cols=216 Identities=14% Similarity=0.136 Sum_probs=174.3
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccc-eeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCH-EFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i-~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
...++|+||||||+|+||++++++|+++|++|++++|++.........++ +++.+|++ +.+.++++++|+|||+|+.
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTTCSEEEECCCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcCCCEEEECCCC
Confidence 44577999999999999999999999999999999999776444444467 89999998 7788889999999999996
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHH
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASE 180 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E 180 (374)
.. ..+.+..+++|+.++.+++++|++.++++|||+||...+.. +.. + .+...|+.+|..+|
T Consensus 95 ~~-----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-----------~~~--~-~~~~~Y~~sK~~~e 155 (236)
T 3e8x_A 95 GP-----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-----------DQG--P-MNMRHYLVAKRLAD 155 (236)
T ss_dssp CT-----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-----------GGS--C-GGGHHHHHHHHHHH
T ss_pred CC-----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-----------CCC--h-hhhhhHHHHHHHHH
Confidence 43 24567788999999999999999999999999999554321 111 1 45678999999999
Q ss_pred HHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC-
Q 017290 181 ELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD- 259 (374)
Q Consensus 181 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~- 259 (374)
.+++. .+++++++||+.++|+... ..+.....+...+++++++|+|++++.+++++
T Consensus 156 ~~~~~----~gi~~~~lrpg~v~~~~~~-------------------~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~ 212 (236)
T 3e8x_A 156 DELKR----SSLDYTIVRPGPLSNEEST-------------------GKVTVSPHFSEITRSITRHDVAKVIAELVDQQH 212 (236)
T ss_dssp HHHHH----SSSEEEEEEECSEECSCCC-------------------SEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGG
T ss_pred HHHHH----CCCCEEEEeCCcccCCCCC-------------------CeEEeccCCCcccCcEeHHHHHHHHHHHhcCcc
Confidence 99873 7899999999999998531 12233344555789999999999999999887
Q ss_pred -CCCcEEecCCCccCHHHHHHHHH
Q 017290 260 -FREPVNIGSDEMVSMNEMAEIVL 282 (374)
Q Consensus 260 -~~~~~~i~~~~~~s~~e~~~~i~ 282 (374)
.+++|+++++ .+++.|+++.+.
T Consensus 213 ~~g~~~~v~~~-~~~~~e~~~~i~ 235 (236)
T 3e8x_A 213 TIGKTFEVLNG-DTPIAKVVEQLG 235 (236)
T ss_dssp GTTEEEEEEEC-SEEHHHHHHTC-
T ss_pred ccCCeEEEeCC-CcCHHHHHHHhc
Confidence 4789999887 699999998765
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-31 Score=230.05 Aligned_cols=208 Identities=13% Similarity=0.172 Sum_probs=173.1
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccc-hhhHhhhccCCCEEEEcccccCCcc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRV-MDNCLKVTKGVDHVFNLAADMGGMG 105 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~-~~~~~~~~~~~d~vi~~a~~~~~~~ 105 (374)
|+||||||+|+||++++++|+++|++|++++|++.+.... .+++++.+|++| .+.+.++++++|+|||+|+...
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~--- 75 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG--- 75 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT---
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC---
Confidence 5899999999999999999999999999999997654433 568999999999 9999999999999999999642
Q ss_pred cccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHH
Q 017290 106 FIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKH 185 (374)
Q Consensus 106 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~ 185 (374)
...+++|+.++.+++++|++.++++|||+||.+++... ++.| . +..|.+.|+.+|..+|++++
T Consensus 76 ------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~-------~~~e-~--~~~~~~~Y~~sK~~~e~~~~- 138 (219)
T 3dqp_A 76 ------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE-------KWIG-A--GFDALKDYYIAKHFADLYLT- 138 (219)
T ss_dssp ------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG-------GCCS-H--HHHHTHHHHHHHHHHHHHHH-
T ss_pred ------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC-------cccc-c--ccccccHHHHHHHHHHHHHH-
Confidence 23778899999999999999999999999998887643 2333 2 44567899999999999986
Q ss_pred HHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC--CCCc
Q 017290 186 YTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FREP 263 (374)
Q Consensus 186 ~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~--~~~~ 263 (374)
+..+++++++||+.+||+... ..+.+ ++..+++++++|+|++++.+++++ .+++
T Consensus 139 --~~~~i~~~ilrp~~v~g~~~~-------------------~~~~~---~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~ 194 (219)
T 3dqp_A 139 --KETNLDYTIIQPGALTEEEAT-------------------GLIDI---NDEVSASNTIGDVADTIKELVMTDHSIGKV 194 (219)
T ss_dssp --HSCCCEEEEEEECSEECSCCC-------------------SEEEE---SSSCCCCEEHHHHHHHHHHHHTCGGGTTEE
T ss_pred --hccCCcEEEEeCceEecCCCC-------------------Ccccc---CCCcCCcccHHHHHHHHHHHHhCccccCcE
Confidence 347899999999999998531 11111 256789999999999999999886 3789
Q ss_pred EEecCCCccCHHHHHHHH
Q 017290 264 VNIGSDEMVSMNEMAEIV 281 (374)
Q Consensus 264 ~~i~~~~~~s~~e~~~~i 281 (374)
||++++. .++.|+.+.-
T Consensus 195 ~~i~~g~-~~~~e~~~~~ 211 (219)
T 3dqp_A 195 ISMHNGK-TAIKEALESL 211 (219)
T ss_dssp EEEEECS-EEHHHHHHTT
T ss_pred EEeCCCC-ccHHHHHHHH
Confidence 9998764 9999887643
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-31 Score=236.03 Aligned_cols=210 Identities=21% Similarity=0.229 Sum_probs=178.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGM 104 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~ 104 (374)
+||+||||||+|+||+++++.|+++|++|++++|++.... ..+++++.+|++|.+.+.++++++|+|||+|+..
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~--- 75 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQCDLADANAVNAMVAGCDGIVHLGGIS--- 75 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCC---
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCc---
Confidence 4678999999999999999999999999999999876543 3457899999999999999999999999999963
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
...+.+..+++|+.++.++++++++.++++|||+||..+|+.... +.+++|+. +..|.+.|+.+|..+|.+++
T Consensus 76 --~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~---~~~~~e~~--~~~~~~~Y~~sK~~~e~~~~ 148 (267)
T 3rft_A 76 --VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQ---TERLGPDV--PARPDGLYGVSKCFGENLAR 148 (267)
T ss_dssp --SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBT---TSCBCTTS--CCCCCSHHHHHHHHHHHHHH
T ss_pred --CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCC---CCCCCCCC--CCCCCChHHHHHHHHHHHHH
Confidence 234567789999999999999999999999999999999975432 22577776 66788999999999999999
Q ss_pred HHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC--CC
Q 017290 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF--RE 262 (374)
Q Consensus 185 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~--~~ 262 (374)
.++.+.+++++++||+.+|++. .++...+++++++|+++++..+++.+. ..
T Consensus 149 ~~a~~~g~~~~~vr~~~v~~~~---------------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~ 201 (267)
T 3rft_A 149 MYFDKFGQETALVRIGSCTPEP---------------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVLGCP 201 (267)
T ss_dssp HHHHHHCCCEEEEEECBCSSSC---------------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCCCSC
T ss_pred HHHHHhCCeEEEEEeecccCCC---------------------------CCCCceeeEEcHHHHHHHHHHHHhCCCCCce
Confidence 9998899999999999999862 233456778999999999999998864 46
Q ss_pred cEEecCCCccCH
Q 017290 263 PVNIGSDEMVSM 274 (374)
Q Consensus 263 ~~~i~~~~~~s~ 274 (374)
++++.++++.++
T Consensus 202 ~~~~~s~~~~~~ 213 (267)
T 3rft_A 202 VVWGASANDAGW 213 (267)
T ss_dssp EEEECCCCTTCC
T ss_pred EEEEeCCCCCCc
Confidence 788887665443
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-30 Score=222.65 Aligned_cols=217 Identities=13% Similarity=0.087 Sum_probs=147.1
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGF 106 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~ 106 (374)
|+||||||+|+||++++++|+++|++|++++|++....... .+++++.+|++|.+. +.+.++|+|||+|+...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~---- 73 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL--SDLSDQNVVVDAYGISP---- 73 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH--HHHTTCSEEEECCCSST----
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhh--hhhcCCCEEEECCcCCc----
Confidence 68999999999999999999999999999999976543322 568999999999887 77889999999999632
Q ss_pred ccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHH
Q 017290 107 IQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHY 186 (374)
Q Consensus 107 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~ 186 (374)
.....|+.++.++++++++.+++++|++||..+|....... +..|+. +..|.+.|+.+|...|.+ ..+
T Consensus 74 ------~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~---~~~~~~--~~~~~~~y~~~k~~~e~~-~~~ 141 (221)
T 3ew7_A 74 ------DEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGN---TLLESK--GLREAPYYPTARAQAKQL-EHL 141 (221)
T ss_dssp ------TTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC------------------------CCCSCCHHHHHHHH-HHH
T ss_pred ------cccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCc---cccccC--CCCCHHHHHHHHHHHHHH-HHH
Confidence 12456999999999999999988999999987765432211 234443 556778899999999987 334
Q ss_pred Hh-hhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC--CCCc
Q 017290 187 TK-DFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FREP 263 (374)
Q Consensus 187 ~~-~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~--~~~~ 263 (374)
.. ..+++++++||+.+||+.... . .+ ......+.+.+.+ .++++++|+|++++.+++++ .++.
T Consensus 142 ~~~~~gi~~~ivrp~~v~g~~~~~----~---~~----~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g~~ 207 (221)
T 3ew7_A 142 KSHQAEFSWTYISPSAMFEPGERT----G---DY----QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLNEH 207 (221)
T ss_dssp HTTTTTSCEEEEECSSCCCCC-----------------------------------CCCHHHHHHHHHHHHHSCSCTTSE
T ss_pred HhhccCccEEEEeCcceecCCCcc----C---ce----EeccccceecCCC---CceEeHHHHHHHHHHHHhCccccCCE
Confidence 33 578999999999999984310 0 01 1112233333333 36899999999999999987 4899
Q ss_pred EEecCCCccCHHH
Q 017290 264 VNIGSDEMVSMNE 276 (374)
Q Consensus 264 ~~i~~~~~~s~~e 276 (374)
||++++.+.+..|
T Consensus 208 ~~~~~~~~~~~~~ 220 (221)
T 3ew7_A 208 FTVAGKLEHHHHH 220 (221)
T ss_dssp EECCC--------
T ss_pred EEECCCCcccccc
Confidence 9999988877665
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-30 Score=233.37 Aligned_cols=232 Identities=13% Similarity=0.053 Sum_probs=180.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCccc--ccccccceeEEecccchhhHhhhccCCCEEEEcccccC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHM--TEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
+|+||||||||+||+++++.|+++| ++|++++|++.... .....+++++.+|+.|.+.+..+++++|+|||+++...
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~ 84 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE 84 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence 5889999999999999999999998 99999999876421 11224678999999999999999999999999998431
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHH
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL 182 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~ 182 (374)
. .....|+.++.+++++|++.++++||++|+..+|+.. +. .+...|+.+|..+|.+
T Consensus 85 ~---------~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~----------~~-----~~~~~y~~sK~~~e~~ 140 (299)
T 2wm3_A 85 S---------CSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLT----------AG-----RLAAAHFDGKGEVEEY 140 (299)
T ss_dssp H---------TCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHT----------TT-----SCCCHHHHHHHHHHHH
T ss_pred c---------ccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccC----------CC-----cccCchhhHHHHHHHH
Confidence 0 0234578899999999999999999998888776421 11 2346799999999999
Q ss_pred HHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceE-eeCCCcccccceeHHHHHHHHHhhhccC--
Q 017290 183 CKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFE-MWGDGLQTRSFTFIDECVEGVLRLTKSD-- 259 (374)
Q Consensus 183 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~Dva~~i~~~~~~~-- 259 (374)
++. .+++++++||+.+||+... .++......+.... ....++..++++|++|+|++++.++.++
T Consensus 141 ~~~----~gi~~~ilrp~~~~~~~~~---------~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~ 207 (299)
T 2wm3_A 141 FRD----IGVPMTSVRLPCYFENLLS---------HFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEK 207 (299)
T ss_dssp HHH----HTCCEEEEECCEEGGGGGT---------TTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHH
T ss_pred HHH----CCCCEEEEeecHHhhhchh---------hcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhh
Confidence 876 5899999999999997421 01111112222211 1234677889999999999999999864
Q ss_pred -CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCC
Q 017290 260 -FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP 295 (374)
Q Consensus 260 -~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~ 295 (374)
.+++|++++ +.+|+.|+++.+.+.+|++..+..+|
T Consensus 208 ~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~~~~~~ 243 (299)
T 2wm3_A 208 YVGQNIGLST-CRHTAEEYAALLTKHTRKVVHDAKMT 243 (299)
T ss_dssp HTTCEEECCS-EEECHHHHHHHHHHHHSSCEEECCCC
T ss_pred hCCeEEEeee-ccCCHHHHHHHHHHHHCCCceeEecC
Confidence 478999986 78999999999999999987655554
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=218.92 Aligned_cols=220 Identities=13% Similarity=0.065 Sum_probs=162.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGF 106 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~ 106 (374)
|+||||||||+||++++++|+++|++|++++|++.........+++++.+|++|.+. +.++++|+|||+|+.. +
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~----~ 74 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVP----W 74 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCC----T
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH--hhcccCCEEEECCccC----C
Confidence 689999999999999999999999999999998765443333578999999999887 7788999999999964 1
Q ss_pred ccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHH
Q 017290 107 IQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHY 186 (374)
Q Consensus 107 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~ 186 (374)
. ......|+.++.+++++|++.+ +++|++||.+++....... ...+.+.. ...|.+.|+.+|..+|. ++.+
T Consensus 75 ~----~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~-~~~~~~~~--~~~~~~~y~~sK~~~e~-~~~~ 145 (224)
T 3h2s_A 75 G----SGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADH-PMILDFPE--SAASQPWYDGALYQYYE-YQFL 145 (224)
T ss_dssp T----SSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSS-CGGGGCCG--GGGGSTTHHHHHHHHHH-HHHH
T ss_pred C----cchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCc-cccccCCC--CCccchhhHHHHHHHHH-HHHH
Confidence 1 1235679999999999999999 8999999976554322110 01223322 33457899999999994 4566
Q ss_pred HhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC--CCCcE
Q 017290 187 TKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FREPV 264 (374)
Q Consensus 187 ~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~--~~~~~ 264 (374)
....+++++++||+.+||++.. ... ......+.. +....++++++|+|++++.+++++ .+++|
T Consensus 146 ~~~~~i~~~ivrp~~v~g~~~~----~~~--------~~~~~~~~~---~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~ 210 (224)
T 3h2s_A 146 QMNANVNWIGISPSEAFPSGPA----TSY--------VAGKDTLLV---GEDGQSHITTGNMALAILDQLEHPTAIRDRI 210 (224)
T ss_dssp TTCTTSCEEEEEECSBCCCCCC----CCE--------EEESSBCCC---CTTSCCBCCHHHHHHHHHHHHHSCCCTTSEE
T ss_pred HhcCCCcEEEEcCccccCCCcc----cCc--------eeccccccc---CCCCCceEeHHHHHHHHHHHhcCccccCCEE
Confidence 6667999999999999998432 110 011122222 234568999999999999999987 48999
Q ss_pred EecCCCccCHHH
Q 017290 265 NIGSDEMVSMNE 276 (374)
Q Consensus 265 ~i~~~~~~s~~e 276 (374)
++++.+..++.+
T Consensus 211 ~~~~~~~~~~~~ 222 (224)
T 3h2s_A 211 VVRDADLEHHHH 222 (224)
T ss_dssp EEEECC------
T ss_pred EEecCcchhccc
Confidence 999877766544
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-29 Score=220.21 Aligned_cols=233 Identities=12% Similarity=0.054 Sum_probs=174.6
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhC--CCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSE--GHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
+++|+||||||+|+||++++++|+++ |++|++++|++...... ..+++++.+|++|.+.+.++++++|+|||+|+..
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~ 80 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTSAV 80 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEecccc
Confidence 35789999999999999999999999 89999999986432221 2357889999999999999999999999999965
Q ss_pred CCcc-----cccCCc-------ceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 102 GGMG-----FIQSNH-------SVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 102 ~~~~-----~~~~~~-------~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
.... .+...+ ...+++|+.++.++++++++.++++|||+||.+++..... . .....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~------~------~~~~~ 148 (253)
T 1xq6_A 81 PKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP------L------NKLGN 148 (253)
T ss_dssp CEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG------G------GGGGG
T ss_pred ccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCc------c------ccccc
Confidence 3210 011112 2346899999999999999999999999999887532110 0 00112
Q ss_pred CchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHH
Q 017290 170 DAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 249 (374)
+.|+.+|..+|.+++. .+++++++||+.+||+..... ..+ . +....+++ ...+++|++|+|
T Consensus 149 ~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~---~~~--------~-~~~~~~~~---~~~~~~~~~Dva 209 (253)
T 1xq6_A 149 GNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVR---ELL--------V-GKDDELLQ---TDTKTVPRADVA 209 (253)
T ss_dssp CCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSSSS---CEE--------E-ESTTGGGG---SSCCEEEHHHHH
T ss_pred hhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcchh---hhh--------c-cCCcCCcC---CCCcEEcHHHHH
Confidence 4588899999998865 689999999999999864211 000 0 00001111 135689999999
Q ss_pred HHHHhhhccC--CCCcEEecCCC---ccCHHHHHHHHHHhcCCC
Q 017290 250 EGVLRLTKSD--FREPVNIGSDE---MVSMNEMAEIVLSFEDKK 288 (374)
Q Consensus 250 ~~i~~~~~~~--~~~~~~i~~~~---~~s~~e~~~~i~~~~g~~ 288 (374)
++++.+++++ .+++||+++++ .+++.|+++.+.+.+|++
T Consensus 210 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~ 253 (253)
T 1xq6_A 210 EVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF 253 (253)
T ss_dssp HHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred HHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence 9999999876 36799999864 699999999999998863
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=8.4e-30 Score=220.00 Aligned_cols=206 Identities=14% Similarity=0.092 Sum_probs=164.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
++|+||||||+|+||+++++.|+++|+ +|++++|++.. ...+++++.+|+++.+.+.+++ +|+|||+|+...
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~ 77 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTI 77 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCCH
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----cCCCceEEeccccCHHHHHHhh--hcEEEECeeecc
Confidence 458999999999999999999999998 99999998765 2245788899999999888888 999999999642
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHH
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL 182 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~ 182 (374)
....+.+..+++|+.++.++++++++.++++|||+||..+|+. +.+.|+.+|..+|.+
T Consensus 78 ---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-------------------~~~~y~~sK~~~e~~ 135 (215)
T 2a35_A 78 ---KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------------SSIFYNRVKGELEQA 135 (215)
T ss_dssp ---HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------------CSSHHHHHHHHHHHH
T ss_pred ---ccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC-------------------CccHHHHHHHHHHHH
Confidence 2234566788899999999999999999999999999988742 346899999999999
Q ss_pred HHHHHhhhCCc-EEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCCC
Q 017290 183 CKHYTKDFGIE-CRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR 261 (374)
Q Consensus 183 ~~~~~~~~~~~-~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~~ 261 (374)
++. .+++ ++++||+.+||+.... ... .... ....++ .+ ..++++|++|+|++++.+++++.+
T Consensus 136 ~~~----~~~~~~~~vrp~~v~g~~~~~----~~~----~~~~--~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~~~ 198 (215)
T 2a35_A 136 LQE----QGWPQLTIARPSLLFGPREEF----RLA----EILA--APIARI-LP--GKYHGIEACDLARALWRLALEEGK 198 (215)
T ss_dssp HTT----SCCSEEEEEECCSEESTTSCE----EGG----GGTT--CCCC-------CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred HHH----cCCCeEEEEeCceeeCCCCcc----hHH----HHHH--Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcCCC
Confidence 876 5899 9999999999986431 111 1111 111122 22 267999999999999999999889
Q ss_pred CcEEecCCCccCHH
Q 017290 262 EPVNIGSDEMVSMN 275 (374)
Q Consensus 262 ~~~~i~~~~~~s~~ 275 (374)
++||+++++.+++.
T Consensus 199 ~~~~i~~~~~~~~~ 212 (215)
T 2a35_A 199 GVRFVESDELRKLG 212 (215)
T ss_dssp EEEEEEHHHHHHHH
T ss_pred CceEEcHHHHHHhh
Confidence 99999987666553
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.4e-29 Score=230.46 Aligned_cols=231 Identities=13% Similarity=0.103 Sum_probs=177.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcc--cccc-cccceeEEec-ccchhhHhhhccCCCEEEEcccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH--MTED-MFCHEFHLVD-LRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-~~~i~~~~~d-l~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
.+|+||||||||+||+++++.|+++|++|++++|+++.. .... ..+++++.+| ++|.+.+.++++++|+|||+++.
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 368899999999999999999999999999999987643 1111 1257889999 99999999999999999999874
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CCeEEEeeccc--ccCCCcccccccCCCCCCCCCCCCCCchHHhHH
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRFFYASSAC--IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 177 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~--vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~ 177 (374)
.. ...|..+ .+++++|++.+ +++|||+||.. .|+. .+...|+.+|.
T Consensus 84 ~~------------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~------------------~~~~~y~~sK~ 132 (352)
T 1xgk_A 84 QA------------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP------------------WPAVPMWAPKF 132 (352)
T ss_dssp TT------------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS------------------CCCCTTTHHHH
T ss_pred CC------------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC------------------CCCccHHHHHH
Confidence 21 1236666 99999999999 99999999975 2221 23367999999
Q ss_pred HHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHH-hccCCc-eEeeCCCcccccceeH-HHHHHHHHh
Q 017290 178 ASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKA-LTSTDK-FEMWGDGLQTRSFTFI-DECVEGVLR 254 (374)
Q Consensus 178 ~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~i~~-~Dva~~i~~ 254 (374)
.+|++++. .+++++++||+ +||++.... . ..++... ...+.. +.+++++++.++++|+ +|+|++++.
T Consensus 133 ~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~----~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~ 202 (352)
T 1xgk_A 133 TVENYVRQ----LGLPSTFVYAG-IYNNNFTSL----P-YPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQ 202 (352)
T ss_dssp HHHHHHHT----SSSCEEEEEEC-EEGGGCBSS----S-CSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHH
T ss_pred HHHHHHHH----cCCCEEEEecc-eecCCchhc----c-cccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHH
Confidence 99999887 48999999987 688754211 0 0011000 112222 2346667888999999 899999999
Q ss_pred hhccC----CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCC
Q 017290 255 LTKSD----FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP 297 (374)
Q Consensus 255 ~~~~~----~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 297 (374)
+++++ .+++||+++ +.+|+.|+++.+.+.+|.+.++..+|..
T Consensus 203 ~l~~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~~~~vp~~ 248 (352)
T 1xgk_A 203 IFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVPKV 248 (352)
T ss_dssp HHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEECSSC
T ss_pred HHhCCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCCCCceEECCHH
Confidence 99875 579999995 7899999999999999998776666643
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-27 Score=203.56 Aligned_cols=201 Identities=12% Similarity=-0.015 Sum_probs=157.1
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCcc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMG 105 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~ 105 (374)
+|+||||||+|+||++++++|+++|++|++++|++.........+++++.+|++|.+.+.++++++|+|||+++....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~-- 80 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND-- 80 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC--
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCC--
Confidence 389999999999999999999999999999999876544332446789999999999999999999999999986432
Q ss_pred cccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHH
Q 017290 106 FIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKH 185 (374)
Q Consensus 106 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~ 185 (374)
....+.|+.++.++++++++.++++||++||..+|+.... ...+...|+.+|..+|.+++.
T Consensus 81 ------~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~-------------~~~~~~~y~~~K~~~e~~~~~ 141 (206)
T 1hdo_A 81 ------LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK-------------VPPRLQAVTDDHIRMHKVLRE 141 (206)
T ss_dssp ------CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTC-------------SCGGGHHHHHHHHHHHHHHHH
T ss_pred ------CCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccc-------------ccccchhHHHHHHHHHHHHHh
Confidence 1123579999999999999999999999999999875321 111457899999999999865
Q ss_pred HHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC--CCCc
Q 017290 186 YTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FREP 263 (374)
Q Consensus 186 ~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~--~~~~ 263 (374)
.+++++++||+.++ +..... . ....... ....+++|++|+|++++.+++++ .+++
T Consensus 142 ----~~i~~~~lrp~~~~-~~~~~~---~--------------~~~~~~~-~~~~~~i~~~Dva~~~~~~~~~~~~~g~~ 198 (206)
T 1hdo_A 142 ----SGLKYVAVMPPHIG-DQPLTG---A--------------YTVTLDG-RGPSRVISKHDLGHFMLRCLTTDEYDGHS 198 (206)
T ss_dssp ----TCSEEEEECCSEEE-CCCCCS---C--------------CEEESSS-CSSCSEEEHHHHHHHHHHTTSCSTTTTCE
T ss_pred ----CCCCEEEEeCCccc-CCCCCc---c--------------eEecccC-CCCCCccCHHHHHHHHHHHhcCccccccc
Confidence 68999999999983 322100 0 0000011 11148999999999999999886 3789
Q ss_pred EEecCCC
Q 017290 264 VNIGSDE 270 (374)
Q Consensus 264 ~~i~~~~ 270 (374)
|+++++.
T Consensus 199 ~~i~~g~ 205 (206)
T 1hdo_A 199 TYPSHQY 205 (206)
T ss_dssp EEEECCC
T ss_pred eeeeccc
Confidence 9998764
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=225.01 Aligned_cols=235 Identities=17% Similarity=0.172 Sum_probs=177.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-c-------cccccceeEEecccchhhHhhhccCCCEEEEc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-T-------EDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNL 97 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~-------~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~ 97 (374)
+|+||||||||+||+++++.|+++|++|++++|+++... . ....+++++.+|+.|.+.+.++++++|+|||+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 688999999999999999999999999999999864321 0 11346789999999999999999999999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CCeEEEeecccccCCCcccccccCCCCCCCCCCCC-CCchHHh
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP-QDAYGLE 175 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~-~~~y~~s 175 (374)
++.... ..|+.++.+++++|++.+ ++|||+ | +|+.... .. +. +..| ...| .+
T Consensus 84 a~~~~~------------~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~-----~~--~~--~~~p~~~~y-~s 137 (313)
T 1qyd_A 84 LAGGVL------------SHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPD-----IM--EH--ALQPGSITF-ID 137 (313)
T ss_dssp CCCSSS------------STTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTT-----SC--CC--CCSSTTHHH-HH
T ss_pred Cccccc------------hhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcc-----cc--cc--CCCCCcchH-HH
Confidence 985421 127778899999999999 999985 3 4543211 01 11 2234 4568 99
Q ss_pred HHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhh
Q 017290 176 KLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255 (374)
Q Consensus 176 K~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~ 255 (374)
|..+|+++++ .+++++++||+.++++...... .... .....+..+.++++++..++++|++|+|++++.+
T Consensus 138 K~~~e~~~~~----~g~~~~ilrp~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~ 207 (313)
T 1qyd_A 138 KRKVRRAIEA----ASIPYTYVSSNMFAGYFAGSLA--QLDG----HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKS 207 (313)
T ss_dssp HHHHHHHHHH----TTCCBCEEECCEEHHHHTTTSS--CTTC----CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHH
T ss_pred HHHHHHHHHh----cCCCeEEEEeceeccccccccc--cccc----cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHH
Confidence 9999998875 6899999999999875321000 0000 0011234556677888899999999999999999
Q ss_pred hccC--CCCcEEecCC-CccCHHHHHHHHHHhcCCCCCcccCCC
Q 017290 256 TKSD--FREPVNIGSD-EMVSMNEMAEIVLSFEDKKLPIHHIPG 296 (374)
Q Consensus 256 ~~~~--~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~ 296 (374)
+.++ .++.|++.++ +.+|+.|+++.+.+.+|++.++..+|.
T Consensus 208 l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 251 (313)
T 1qyd_A 208 IDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISS 251 (313)
T ss_dssp TTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBCS
T ss_pred HhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCCCCceEECCH
Confidence 9876 3677887754 799999999999999999877666653
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=8.6e-29 Score=225.59 Aligned_cols=228 Identities=19% Similarity=0.208 Sum_probs=174.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcc--c-------ccccccceeEEecccchhhHhhhccCCCEEEE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH--M-------TEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~-------~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
||+|+||||||+||+++++.|+++|++|++++|+.... . .....+++++.+|++|.+.+.++++++|+|||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 68899999999999999999999999999999986532 1 01234688999999999999999999999999
Q ss_pred cccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CCeEEEeecccccCCCcccccccCCCCCCCCCCCC-CCchHH
Q 017290 97 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP-QDAYGL 174 (374)
Q Consensus 97 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~-~~~y~~ 174 (374)
+++.. ++.++.+++++|++.+ ++|||+ |+ |+.. ..+.. +..| ...| .
T Consensus 84 ~a~~~----------------~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~--------~~~~~--~~~p~~~~y-~ 132 (308)
T 1qyc_A 84 TVGSL----------------QIESQVNIIKAIKEVGTVKRFFP-SE---FGND--------VDNVH--AVEPAKSVF-E 132 (308)
T ss_dssp CCCGG----------------GSGGGHHHHHHHHHHCCCSEEEC-SC---CSSC--------TTSCC--CCTTHHHHH-H
T ss_pred CCcch----------------hhhhHHHHHHHHHhcCCCceEee-cc---cccC--------ccccc--cCCcchhHH-H
Confidence 99842 1445689999999998 999984 43 4421 12222 3334 3568 9
Q ss_pred hHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHh
Q 017290 175 EKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 254 (374)
Q Consensus 175 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~ 254 (374)
+|..+|.+++. .+++++++||+.++++..... . .... .......+.++++++..++++|++|+|++++.
T Consensus 133 sK~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~~-----~-~~~~-~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 201 (308)
T 1qyc_A 133 VKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSL-----A-QAGL-TAPPRDKVVILGDGNARVVFVKEEDIGTFTIK 201 (308)
T ss_dssp HHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTT-----T-CTTC-SSCCSSEEEEETTSCCEEEEECHHHHHHHHHT
T ss_pred HHHHHHHHHHh----cCCCeEEEEeceecccccccc-----c-cccc-cCCCCCceEEecCCCceEEEecHHHHHHHHHH
Confidence 99999998876 689999999999987532110 0 0000 01124456777888889999999999999999
Q ss_pred hhccC--CCCcEEecC-CCccCHHHHHHHHHHhcCCCCCcccCC
Q 017290 255 LTKSD--FREPVNIGS-DEMVSMNEMAEIVLSFEDKKLPIHHIP 295 (374)
Q Consensus 255 ~~~~~--~~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 295 (374)
++.++ .++.|++.+ ++.+|+.|+++.+.+.+|++.++..+|
T Consensus 202 ~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 245 (308)
T 1qyc_A 202 AVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVP 245 (308)
T ss_dssp TSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEEC
T ss_pred HHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCceEeCC
Confidence 99875 367788865 478999999999999999987766555
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-28 Score=224.39 Aligned_cols=225 Identities=16% Similarity=0.174 Sum_probs=174.0
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc----cccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT----EDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
+++||||||||+||+++++.|+++|++|++++|++..... ....+++++.+|+.|.+.+.++++++|+|||+++..
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~ 90 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFP 90 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchh
Confidence 4589999999999999999999999999999998752211 123468899999999999999999999999999842
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCC-CCeEEEeecccccCCCcccccccCCCCCCCCCCCC-CCchHHhHHHH
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP-QDAYGLEKLAS 179 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~-~~~y~~sK~~~ 179 (374)
++.++.+++++|++.+ ++|||+ | +|+.. .++.. +..| ...| .+|..+
T Consensus 91 ----------------~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~--------~~~~~--~~~p~~~~y-~sK~~~ 139 (318)
T 2r6j_A 91 ----------------QILDQFKILEAIKVAGNIKRFLP-S---DFGVE--------EDRIN--ALPPFEALI-ERKRMI 139 (318)
T ss_dssp ----------------GSTTHHHHHHHHHHHCCCCEEEC-S---CCSSC--------TTTCC--CCHHHHHHH-HHHHHH
T ss_pred ----------------hhHHHHHHHHHHHhcCCCCEEEe-e---ccccC--------ccccc--CCCCcchhH-HHHHHH
Confidence 1455789999999998 999984 3 34421 12211 2223 3468 999999
Q ss_pred HHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC
Q 017290 180 EELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD 259 (374)
Q Consensus 180 E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~ 259 (374)
|.+++. .+++++++||+.+++. ....++.. ......+.++++++..++++|++|+|++++.++.++
T Consensus 140 e~~~~~----~~~~~~~lr~~~~~~~---------~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~ 205 (318)
T 2r6j_A 140 RRAIEE----ANIPYTYVSANCFASY---------FINYLLRP-YDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDP 205 (318)
T ss_dssp HHHHHH----TTCCBEEEECCEEHHH---------HHHHHHCT-TCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCG
T ss_pred HHHHHh----cCCCeEEEEcceehhh---------hhhhhccc-cCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCc
Confidence 988876 6899999999988753 22222221 123456677788888999999999999999999875
Q ss_pred --CCCcEEecC-CCccCHHHHHHHHHHhcCCCCCcccCC
Q 017290 260 --FREPVNIGS-DEMVSMNEMAEIVLSFEDKKLPIHHIP 295 (374)
Q Consensus 260 --~~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 295 (374)
.++.|++.+ ++.+|+.|+++.+.+.+|+++++..+|
T Consensus 206 ~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 244 (318)
T 2r6j_A 206 RALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVP 244 (318)
T ss_dssp GGTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEEEC
T ss_pred cccCeEEEecCCCCccCHHHHHHHHHHHhCCCCceeecC
Confidence 367778764 489999999999999999987766655
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.9e-28 Score=219.96 Aligned_cols=226 Identities=19% Similarity=0.194 Sum_probs=173.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc----------ccccccceeEEecccchhhHhhhccCCCEEE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM----------TEDMFCHEFHLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi 95 (374)
||+||||||||+||+++++.|+++|++|++++|+++... .....+++++.+|+.|.+.+.++++++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 578999999999999999999999999999999862110 0112467899999999999999999999999
Q ss_pred EcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CCeEEEeecccccCCCcccccccCCCCCCCCCCCC-CCchH
Q 017290 96 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP-QDAYG 173 (374)
Q Consensus 96 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~-~~~y~ 173 (374)
|+++... +.++.+++++|++.+ ++|||+ | +|+.. .++.. +..| .+.|
T Consensus 82 ~~a~~~~----------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~--------~~~~~--~~~p~~~~y- 130 (307)
T 2gas_A 82 CAAGRLL----------------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLD--------VDRHD--AVEPVRQVF- 130 (307)
T ss_dssp ECSSSSC----------------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSC--------TTSCC--CCTTHHHHH-
T ss_pred ECCcccc----------------cccHHHHHHHHHhcCCceEEee-c---ccccC--------ccccc--CCCcchhHH-
Confidence 9998421 456789999999998 999983 3 34422 12211 2234 3578
Q ss_pred HhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHH--HhccCCceEeeCCCcccccceeHHHHHHH
Q 017290 174 LEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRK--ALTSTDKFEMWGDGLQTRSFTFIDECVEG 251 (374)
Q Consensus 174 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 251 (374)
.+|..+|.+++. .+++++++||+.++++... .+... .......+.++++++..+++++++|+|++
T Consensus 131 ~sK~~~e~~~~~----~~i~~~~lrp~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 197 (307)
T 2gas_A 131 EEKASIRRVIEA----EGVPYTYLCCHAFTGYFLR---------NLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTF 197 (307)
T ss_dssp HHHHHHHHHHHH----HTCCBEEEECCEETTTTGG---------GTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHH----cCCCeEEEEcceeeccccc---------cccccccccCCCCeEEEecCCCcceEEeeHHHHHHH
Confidence 999999998875 6899999999999886421 00000 01123456677888889999999999999
Q ss_pred HHhhhccC--CCCcEEecC-CCccCHHHHHHHHHHhcCCCCCcccCC
Q 017290 252 VLRLTKSD--FREPVNIGS-DEMVSMNEMAEIVLSFEDKKLPIHHIP 295 (374)
Q Consensus 252 i~~~~~~~--~~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 295 (374)
++.++.++ .++.|++.+ ++.+|+.|+++.+.+.+|++.++..+|
T Consensus 198 ~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 244 (307)
T 2gas_A 198 TIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVS 244 (307)
T ss_dssp HHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEEEEEC
T ss_pred HHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCceeecC
Confidence 99999875 367777765 478999999999999999987766555
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.9e-28 Score=221.96 Aligned_cols=227 Identities=14% Similarity=0.142 Sum_probs=174.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC-Cccc----c----cccccceeEEecccchhhHhhhccCCCEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK-NEHM----T----EDMFCHEFHLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~----~----~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi 95 (374)
+||+||||||||+||+++++.|+++|++|++++|++ +... . ....+++++.+|+.|.+.+..+++++|+||
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi 82 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI 82 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence 467899999999999999999999999999999986 2110 0 112468899999999999999999999999
Q ss_pred EcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CCeEEEeecccccCCCcccccccCCCCCCCCCCCC-CCchH
Q 017290 96 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP-QDAYG 173 (374)
Q Consensus 96 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~-~~~y~ 173 (374)
|+++.. .+.++.+++++|++.+ ++|||+ | +|+... ++.. +..| .+.|
T Consensus 83 ~~a~~~----------------~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~--------~~~~--~~~p~~~~y- 131 (321)
T 3c1o_A 83 SALPFP----------------MISSQIHIINAIKAAGNIKRFLP-S---DFGCEE--------DRIK--PLPPFESVL- 131 (321)
T ss_dssp ECCCGG----------------GSGGGHHHHHHHHHHCCCCEEEC-S---CCSSCG--------GGCC--CCHHHHHHH-
T ss_pred ECCCcc----------------chhhHHHHHHHHHHhCCccEEec-c---ccccCc--------cccc--cCCCcchHH-
Confidence 999842 1455789999999998 999983 3 344321 1211 2223 4578
Q ss_pred HhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHH--HhccCCceEeeCCCcccccceeHHHHHHH
Q 017290 174 LEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRK--ALTSTDKFEMWGDGLQTRSFTFIDECVEG 251 (374)
Q Consensus 174 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 251 (374)
.+|..+|.+++. .+++++++||+.++++. ...++.. ....+..+.++++++..++++|++|+|++
T Consensus 132 ~sK~~~e~~~~~----~~~~~~~lrp~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 198 (321)
T 3c1o_A 132 EKKRIIRRAIEA----AALPYTYVSANCFGAYF---------VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKY 198 (321)
T ss_dssp HHHHHHHHHHHH----HTCCBEEEECCEEHHHH---------HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHH----cCCCeEEEEeceecccc---------ccccccccccccccCceEEecCCCcceeEeeHHHHHHH
Confidence 999999998875 68999999999888642 1122110 01224456677888889999999999999
Q ss_pred HHhhhccC--CCCcEEecC-CCccCHHHHHHHHHHhcCCCCCcccCC
Q 017290 252 VLRLTKSD--FREPVNIGS-DEMVSMNEMAEIVLSFEDKKLPIHHIP 295 (374)
Q Consensus 252 i~~~~~~~--~~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 295 (374)
++.++.++ .++.|++.+ ++.+|+.|+++.+.+.+|+++++..+|
T Consensus 199 ~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 245 (321)
T 3c1o_A 199 TIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMP 245 (321)
T ss_dssp HHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCEEEEC
T ss_pred HHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcceeeeCC
Confidence 99999875 367788875 589999999999999999988766655
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-26 Score=202.71 Aligned_cols=207 Identities=13% Similarity=0.050 Sum_probs=159.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
++|+||||||+|+||+++++.|+++|+ +|++++|++.........++.++.+|++|.+.+.++++++|+|||||+...
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~ 96 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTR 96 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCH
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCccc
Confidence 468999999999999999999999999 999999987654433334678899999999999999999999999999642
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHH
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL 182 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~ 182 (374)
...+.+..+++|+.++.++++++++.++++||++||.++|+. +...|+.+|...|.+
T Consensus 97 ----~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-------------------~~~~Y~~sK~~~e~~ 153 (242)
T 2bka_A 97 ----GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------------SNFLYLQVKGEVEAK 153 (242)
T ss_dssp ----HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------------CSSHHHHHHHHHHHH
T ss_pred ----ccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC-------------------CcchHHHHHHHHHHH
Confidence 112345678899999999999999999899999999988742 235799999999999
Q ss_pred HHHHHhhhCC-cEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC-
Q 017290 183 CKHYTKDFGI-ECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF- 260 (374)
Q Consensus 183 ~~~~~~~~~~-~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~- 260 (374)
++. .++ +++++||+.+||+... ......+...... .. +. ......+++++|+|++++.++.++.
T Consensus 154 ~~~----~~~~~~~~vrpg~v~~~~~~----~~~~~~~~~~~~~-~~--~~---~~~~~~~~~~~dva~~~~~~~~~~~~ 219 (242)
T 2bka_A 154 VEE----LKFDRYSVFRPGVLLCDRQE----SRPGEWLVRKFFG-SL--PD---SWASGHSVPVVTVVRAMLNNVVRPRD 219 (242)
T ss_dssp HHT----TCCSEEEEEECCEEECTTGG----GSHHHHHHHHHHC-SC--CT---TGGGGTEEEHHHHHHHHHHHHTSCCC
T ss_pred HHh----cCCCCeEEEcCceecCCCCC----CcHHHHHHHHhhc-cc--Cc---cccCCcccCHHHHHHHHHHHHhCccc
Confidence 877 467 5999999999998532 1112222222221 11 10 1113468999999999999998875
Q ss_pred CCcEEecC
Q 017290 261 REPVNIGS 268 (374)
Q Consensus 261 ~~~~~i~~ 268 (374)
.+.+++.+
T Consensus 220 ~~~~~~~~ 227 (242)
T 2bka_A 220 KQMELLEN 227 (242)
T ss_dssp SSEEEEEH
T ss_pred cCeeEeeH
Confidence 46666654
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.7e-25 Score=192.62 Aligned_cols=202 Identities=13% Similarity=0.064 Sum_probs=143.9
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
.++||+||||||+|+||+++++.|+++| ++|++++|++.........+++++.+|++|.+.+.++++++|+|||+++..
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~ 99 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGE 99 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCST
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Confidence 3457899999999999999999999999 899999999876555445578999999999999999999999999999842
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHH
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEE 181 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~ 181 (374)
. ....+.++++++++.++++||++||..+|+....... ...+.. . ..+...+..+|.
T Consensus 100 ~---------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~--~~~~~~--~----~~~~~~~~~~~~ 156 (236)
T 3qvo_A 100 D---------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFV--EWNNAV--I----GEPLKPFRRAAD 156 (236)
T ss_dssp T---------------HHHHHHHHHHHHHHTTCCEEEEECCCCC------------------------CGGGHHHHHHHH
T ss_pred c---------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccc--cchhhc--c----cchHHHHHHHHH
Confidence 1 1245678999999999999999999999976432100 111111 1 223334444555
Q ss_pred HHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc-cccceeHHHHHHHHHhhhccC-
Q 017290 182 LCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ-TRSFTFIDECVEGVLRLTKSD- 259 (374)
Q Consensus 182 ~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~i~~~~~~~- 259 (374)
.++ ..+++++++||+.++++.... ......+.. ..++++.+|+|++++.++.++
T Consensus 157 ~l~----~~gi~~~~vrPg~i~~~~~~~--------------------~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~ 212 (236)
T 3qvo_A 157 AIE----ASGLEYTILRPAWLTDEDIID--------------------YELTSRNEPFKGTIVSRKSVAALITDIIDKPE 212 (236)
T ss_dssp HHH----TSCSEEEEEEECEEECCSCCC--------------------CEEECTTSCCSCSEEEHHHHHHHHHHHHHSTT
T ss_pred HHH----HCCCCEEEEeCCcccCCCCcc--------------------eEEeccCCCCCCcEECHHHHHHHHHHHHcCcc
Confidence 543 478999999999999874310 011111111 236899999999999999876
Q ss_pred --CCCcEEecCCCc
Q 017290 260 --FREPVNIGSDEM 271 (374)
Q Consensus 260 --~~~~~~i~~~~~ 271 (374)
.++.|++++++.
T Consensus 213 ~~~g~~~~i~~~~~ 226 (236)
T 3qvo_A 213 KHIGENIGINQPGT 226 (236)
T ss_dssp TTTTEEEEEECSSC
T ss_pred cccCeeEEecCCCC
Confidence 378899987654
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-25 Score=200.06 Aligned_cols=242 Identities=11% Similarity=0.042 Sum_probs=176.3
Q ss_pred cCCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc---
Q 017290 18 REPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK--- 89 (374)
Q Consensus 18 ~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~--- 89 (374)
..+.+..++++||||||+|+||++++++|+++|++|++++|+....... ....+.++.+|++|.+.+.++++
T Consensus 8 ~~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 87 (278)
T 2bgk_A 8 DSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTI 87 (278)
T ss_dssp ---CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 3344556778999999999999999999999999999999875432111 01157889999999998888775
Q ss_pred ----CCCEEEEcccccCCc-----ccccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCccccccc
Q 017290 90 ----GVDHVFNLAADMGGM-----GFIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNV 156 (374)
Q Consensus 90 ----~~d~vi~~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~ 156 (374)
++|+|||+|+..... .....+.+..+++|+.++.++++++.. .+..++|++||..+|....
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------ 161 (278)
T 2bgk_A 88 AKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE------ 161 (278)
T ss_dssp HHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT------
T ss_pred HHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC------
Confidence 799999999965321 111123455788999999999988765 3556999999988874311
Q ss_pred CCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEee
Q 017290 157 SLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMW 233 (374)
Q Consensus 157 ~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (374)
.+...|+.+|...|.+++.++.+ .+++++++||+.++++...... .....+.......
T Consensus 162 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~------- 222 (278)
T 2bgk_A 162 ----------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVF--GVDSSRVEELAHQ------- 222 (278)
T ss_dssp ----------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSS--SCCHHHHHHHHHH-------
T ss_pred ----------CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhc--ccchhHHHHhhhc-------
Confidence 14468999999999999998865 5899999999999998643211 1111222222110
Q ss_pred CCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccCHHHHHHHHHHhc
Q 017290 234 GDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSMNEMAEIVLSFE 285 (374)
Q Consensus 234 ~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s~~e~~~~i~~~~ 285 (374)
.+.....+++++|+|++++.++..+ .+..|++.++..+++.|+++.+.+.+
T Consensus 223 -~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 223 -AANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL 277 (278)
T ss_dssp -TCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred -ccccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence 1112345899999999999988653 37789999999999999999887654
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.5e-26 Score=201.75 Aligned_cols=228 Identities=14% Similarity=0.007 Sum_probs=162.0
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc----CCCEEEEccccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK----GVDHVFNLAADM 101 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~----~~d~vi~~a~~~ 101 (374)
||+||||||+|+||+++++.|+++|++|++++|++..... .+.+|+.+.+.+.++++ ++|+|||+|+..
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG 73 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------cccCCcccHHHHHHHHHHcCCCccEEEECCCCC
Confidence 4789999999999999999999999999999998654321 25789999888888876 899999999964
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhC----CCCeEEEeecccccCCCccccc-cc---CCCCCCC-----CCCCC
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRIS----GVKRFFYASSACIYPEFKQLET-NV---SLKESDA-----WPAEP 168 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~----~~~~~i~~Ss~~vy~~~~~~~~-~~---~~~e~~~-----~~~~~ 168 (374)
. ...+.+..+++|+.++.++++++... +.+++|++||..+|+.....+. .+ ..+++.+ ....+
T Consensus 74 ~----~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (255)
T 2dkn_A 74 V----TAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQT 149 (255)
T ss_dssp T----TSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCH
T ss_pred C----cchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCc
Confidence 3 13356778999999999999977653 5679999999999875421100 00 0000000 00134
Q ss_pred CCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeH
Q 017290 169 QDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
...|+.+|...|.+++.++.+ .+++++++||+.++++.. ..++..... +....... + ...+++++
T Consensus 150 ~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~---------~~~~~~~~~-~~~~~~~~-~-~~~~~~~~ 217 (255)
T 2dkn_A 150 HLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL---------QASKADPRY-GESTRRFV-A-PLGRGSEP 217 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH---------HHHHHCTTT-HHHHHSCC-C-TTSSCBCH
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh---------hhcccchhh-HHHHHHHH-H-HhcCCCCH
Confidence 578999999999999998766 589999999999998731 111110000 00000101 1 34578999
Q ss_pred HHHHHHHHhhhccC----CCCcEEecCCCccCHHH
Q 017290 246 DECVEGVLRLTKSD----FREPVNIGSDEMVSMNE 276 (374)
Q Consensus 246 ~Dva~~i~~~~~~~----~~~~~~i~~~~~~s~~e 276 (374)
+|+|++++.++..+ .++.|+++++..++++|
T Consensus 218 ~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 218 REVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred HHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence 99999999998764 36789999887766543
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-24 Score=186.64 Aligned_cols=197 Identities=15% Similarity=0.145 Sum_probs=149.1
Q ss_pred CCeEEEEcCcchhHHHHHHHHH-hCCCEEEEEeCCCC-ccccc--ccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 26 KLRISVTGAGGFIASHIARRLK-SEGHYIIASDWKKN-EHMTE--DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~-~~~~~--~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
|++||||||+|+||+++++.|+ +.|++|++++|++. ..... ...+++++.+|++|.+.+.++++++|+|||+++..
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~ 84 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES 84 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence 4559999999999999999999 89999999999876 44332 34567899999999999999999999999999842
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCC-chHHhHHHHH
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD-AYGLEKLASE 180 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~-~y~~sK~~~E 180 (374)
|+. ++++++++++.+++|||++||..+|...... ..+. ...... .|+.+|..+|
T Consensus 85 ----------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~-----~~~~---~~~~~~~~y~~~K~~~e 139 (221)
T 3r6d_A 85 ----------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVA-----LEKW---TFDNLPISYVQGERQAR 139 (221)
T ss_dssp ----------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHH-----HHHH---HHHTSCHHHHHHHHHHH
T ss_pred ----------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcc-----cccc---cccccccHHHHHHHHHH
Confidence 455 8999999999999999999999998753320 0000 001223 7999999999
Q ss_pred HHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc-cccceeHHHHHHHHHhhh--c
Q 017290 181 ELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ-TRSFTFIDECVEGVLRLT--K 257 (374)
Q Consensus 181 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~i~~~~--~ 257 (374)
.+++. .+++++++||+.++++... ..+.....+.. ...+++.+|+|++++.++ .
T Consensus 140 ~~~~~----~~i~~~~vrpg~v~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~ 196 (221)
T 3r6d_A 140 NVLRE----SNLNYTILRLTWLYNDPEX-------------------TDYELIPEGAQFNDAQVSREAVVKAIFDILHAA 196 (221)
T ss_dssp HHHHH----SCSEEEEEEECEEECCTTC-------------------CCCEEECTTSCCCCCEEEHHHHHHHHHHHHTCS
T ss_pred HHHHh----CCCCEEEEechhhcCCCCC-------------------cceeeccCCccCCCceeeHHHHHHHHHHHHHhc
Confidence 98875 6899999999999987321 01111111111 224899999999999999 6
Q ss_pred cCC---CCcEEecCCC
Q 017290 258 SDF---REPVNIGSDE 270 (374)
Q Consensus 258 ~~~---~~~~~i~~~~ 270 (374)
++. ++.+.+.++.
T Consensus 197 ~~~~~~~~~~~i~~~~ 212 (221)
T 3r6d_A 197 DETPFHRTSIGVGEPG 212 (221)
T ss_dssp CCGGGTTEEEEEECTT
T ss_pred ChhhhhcceeeecCCC
Confidence 653 5667776543
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=195.15 Aligned_cols=241 Identities=15% Similarity=0.029 Sum_probs=169.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhcc-------CCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
.++|+||||||+|+||++++++|+++|++|++++|+........ ...+.++.+|++|.+.+.++++ ++|+
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 82 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV 82 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 45789999999999999999999999999999999875433221 1357889999999998887775 7899
Q ss_pred EEEcccccCCc---ccccCCcceehhhhHHH----HHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 94 VFNLAADMGGM---GFIQSNHSVIMYNNTMI----SFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 94 vi~~a~~~~~~---~~~~~~~~~~~~~n~~~----~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
|||+|+..... .....+.+..+++|+.+ ++.++..+++.+..++|++||...+. +.
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------------~~ 145 (281)
T 3m1a_A 83 LVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL-----------------SF 145 (281)
T ss_dssp EEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------------CC
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC-----------------CC
Confidence 99999975321 12223345578899999 55555555667777999999976653 23
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCC--CCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGM--EKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
.+...|+.+|...|.+++.++.+ .+++++++|||.+.++....... ......+...... ...+ .......+
T Consensus 146 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~ 221 (281)
T 3m1a_A 146 AGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGP-TRQL---VQGSDGSQ 221 (281)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHH-HHHH---HHC-----
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHH-HHHH---HhhccCCC
Confidence 45678999999999999999877 68999999999998764321110 0011111111100 0000 11123456
Q ss_pred ceeHHHHHHHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhc
Q 017290 242 FTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFE 285 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~ 285 (374)
+.+++|+|++++.+++++ .+..|+++++....+.+....+.+.+
T Consensus 222 ~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~ 266 (281)
T 3m1a_A 222 PGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAEL 266 (281)
T ss_dssp CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHH
Confidence 889999999999999887 47789999887777777776666554
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-24 Score=191.15 Aligned_cols=221 Identities=14% Similarity=0.064 Sum_probs=163.6
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
.+.+|+||||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 34668999999999999999999999999999999986432111 11246788999999998888775
Q ss_pred CCCEEEEcccccCCcc--cccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 90 GVDHVFNLAADMGGMG--FIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~--~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
++|+|||+|+...... ....+.+..+++|+.++.++++++. +.+..++|++||...+..
T Consensus 88 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------- 152 (255)
T 1fmc_A 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK--------------- 152 (255)
T ss_dssp SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC---------------
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC---------------
Confidence 8999999999754211 1222345678899999988888774 456679999999877642
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
..+...|+.+|...|.+++.++.+. +++++++||+.++++.... .....+...... +. ...
T Consensus 153 --~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~-~~---------~~~ 216 (255)
T 1fmc_A 153 --NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS----VITPEIEQKMLQ-HT---------PIR 216 (255)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT----TCCHHHHHHHHH-TC---------SSC
T ss_pred --CCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh----ccChHHHHHHHh-cC---------Ccc
Confidence 2345689999999999999988664 7999999999999864210 111222222222 11 123
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCCCccCH
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSM 274 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s~ 274 (374)
.+++++|+|++++.++..+ .+++|+++++..+++
T Consensus 217 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 217 RLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred cCCCHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence 5789999999999998753 367899999887764
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=184.77 Aligned_cols=218 Identities=20% Similarity=0.126 Sum_probs=159.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc--cccceeEEecccchhhHhhhcc---CCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED--MFCHEFHLVDLRVMDNCLKVTK---GVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~i~~~~~dl~~~~~~~~~~~---~~d~vi~~a 98 (374)
+.+|+||||||+|+||++++++|+++|++|++++|++....... ..+++++.+|+++.+.+.++++ ++|+|||+|
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A 84 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA 84 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECC
Confidence 45689999999999999999999999999999999864322111 1246778999999999988876 589999999
Q ss_pred cccCCccc---ccCCcceehhhhHHHHHHHHHHHHhC----C-CCeEEEeecccccCCCcccccccCCCCCCCCCCCCCC
Q 017290 99 ADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRIS----G-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170 (374)
Q Consensus 99 ~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~----~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~ 170 (374)
+....... ...+.+..+++|+.++.++++++... + ..+||++||...|.. ..+..
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------------~~~~~ 147 (244)
T 1cyd_A 85 ALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT-----------------FPNLI 147 (244)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------------CTTBH
T ss_pred cccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCC-----------------CCCcc
Confidence 96542212 12234557889999998888877543 4 469999999877642 12346
Q ss_pred chHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHH
Q 017290 171 AYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247 (374)
Q Consensus 171 ~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 247 (374)
.|+.+|...|.+++.++.+ .+++++++||+.++++.... ......++..... +.+..++++++|
T Consensus 148 ~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~----------~~~~~~~~~~~d 214 (244)
T 1cyd_A 148 TYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKK---VSADPEFARKLKE----------RHPLRKFAEVED 214 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHH---HTCCHHHHHHHHH----------HSTTSSCBCHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccc---cccCHHHHHHHHh----------cCCccCCCCHHH
Confidence 8999999999999998876 57999999999999874210 0001122222221 112357899999
Q ss_pred HHHHHHhhhccC----CCCcEEecCCCc
Q 017290 248 CVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 248 va~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+|++++.++..+ .++.+++.++..
T Consensus 215 va~~~~~l~~~~~~~~~G~~~~v~gG~~ 242 (244)
T 1cyd_A 215 VVNSILFLLSDRSASTSGGGILVDAGYL 242 (244)
T ss_dssp HHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred HHHHHHHHhCchhhcccCCEEEECCCcc
Confidence 999999998764 267788877654
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.3e-23 Score=181.68 Aligned_cols=214 Identities=14% Similarity=0.132 Sum_probs=163.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEEEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHVFN 96 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi~ 96 (374)
.++|+||||||+|+||+++++.|+++|++|++++|+...... ..+.++.+|++|.+.+.++++ ++|++||
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 102 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD---PDIHTVAGDISKPETADRIVREGIERFGRIDSLVN 102 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS---TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 466899999999999999999999999999999998764332 257889999999998887775 8999999
Q ss_pred cccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 97 LAADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 97 ~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
+|+....... ...+.+..+++|+.++.++++++ ++.+..++|++||...+... +..+.
T Consensus 103 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------~~~~~ 167 (260)
T 3un1_A 103 NAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM---------------VGMPS 167 (260)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB---------------TTCCC
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC---------------CCCcc
Confidence 9997643222 22334567889999999998877 45666799999998765321 22355
Q ss_pred CchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHH
Q 017290 170 DAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFID 246 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 246 (374)
..|+.+|...+.+++.++.+. ++++.+++||.++++... ... ... +. ...+...+.+++
T Consensus 168 ~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~-----~~~---~~~-~~---------~~~p~~r~~~~~ 229 (260)
T 3un1_A 168 ALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHP-----AET---HST-LA---------GLHPVGRMGEIR 229 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSC-----GGG---HHH-HH---------TTSTTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCC-----HHH---HHH-Hh---------ccCCCCCCcCHH
Confidence 789999999999999998876 799999999999987531 111 111 11 112344678999
Q ss_pred HHHHHHHhhhccC--CCCcEEecCCCccC
Q 017290 247 ECVEGVLRLTKSD--FREPVNIGSDEMVS 273 (374)
Q Consensus 247 Dva~~i~~~~~~~--~~~~~~i~~~~~~s 273 (374)
|+|++++.+.+.. .+.++++.+|...+
T Consensus 230 dva~av~~L~~~~~itG~~i~vdGG~~~~ 258 (260)
T 3un1_A 230 DVVDAVLYLEHAGFITGEILHVDGGQNAG 258 (260)
T ss_dssp HHHHHHHHHHHCTTCCSCEEEESTTGGGC
T ss_pred HHHHHHHHhcccCCCCCcEEEECCCeecc
Confidence 9999999985544 47889998876543
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-23 Score=178.73 Aligned_cols=187 Identities=13% Similarity=0.100 Sum_probs=146.0
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc---CCCEEEEcccccC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK---GVDHVFNLAADMG 102 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~---~~d~vi~~a~~~~ 102 (374)
+|+||||||+|+||++++++|+ +|++|++++|++. .+.+|+.+.+.+.++++ ++|+|||+|+...
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~ 70 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSAT 70 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCC
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 4689999999999999999999 9999999999854 46899999998888876 4899999999653
Q ss_pred CcccccC---CcceehhhhHHHHHHHHHHHHhC---CCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhH
Q 017290 103 GMGFIQS---NHSVIMYNNTMISFNMLEASRIS---GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEK 176 (374)
Q Consensus 103 ~~~~~~~---~~~~~~~~n~~~~~~ll~a~~~~---~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK 176 (374)
....... +....+++|+.++.++++++.+. + .++|++||...+. +..+...|+.+|
T Consensus 71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~-----------------~~~~~~~Y~~sK 132 (202)
T 3d7l_A 71 FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMED-----------------PIVQGASAAMAN 132 (202)
T ss_dssp CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTS-----------------CCTTCHHHHHHH
T ss_pred CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcC-----------------CCCccHHHHHHH
Confidence 2222222 23456789999999999998776 4 5999999976643 223456899999
Q ss_pred HHHHHHHHHHHhhh--CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHh
Q 017290 177 LASEELCKHYTKDF--GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 254 (374)
Q Consensus 177 ~~~E~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~ 254 (374)
...|.+++.++.+. +++++++||+.++++.. . . ++....+++++++|+|++++.
T Consensus 133 ~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~----------~----~----------~~~~~~~~~~~~~dva~~~~~ 188 (202)
T 3d7l_A 133 GAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD----------K----L----------EPFFEGFLPVPAAKVARAFEK 188 (202)
T ss_dssp HHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH----------H----H----------GGGSTTCCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCeEEEEEecCccCCchh----------h----h----------hhhccccCCCCHHHHHHHHHH
Confidence 99999999998764 89999999999998621 0 0 111234578999999999998
Q ss_pred hhccC-CCCcEEe
Q 017290 255 LTKSD-FREPVNI 266 (374)
Q Consensus 255 ~~~~~-~~~~~~i 266 (374)
++... .+++|++
T Consensus 189 ~~~~~~~G~~~~v 201 (202)
T 3d7l_A 189 SVFGAQTGESYQV 201 (202)
T ss_dssp HHHSCCCSCEEEE
T ss_pred hhhccccCceEec
Confidence 88655 3567776
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5e-23 Score=181.11 Aligned_cols=220 Identities=17% Similarity=0.103 Sum_probs=159.2
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--ccccceeEEecccchhhHhhhcc---CCCEEEEc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--DMFCHEFHLVDLRVMDNCLKVTK---GVDHVFNL 97 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~i~~~~~dl~~~~~~~~~~~---~~d~vi~~ 97 (374)
...+++||||||+|+||+++++.|+++|++|++++|+..+.... ...+++++.+|+++.+.+.++++ ++|+|||+
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 83 (244)
T 3d3w_A 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN 83 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence 34568999999999999999999999999999999986432211 11245778999999999988886 58999999
Q ss_pred ccccCCcccc---cCCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 98 AADMGGMGFI---QSNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 98 a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
|+........ ..+.+..+++|+.++..+++++.. .+ ..++|++||...+.. ..+.
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------------~~~~ 146 (244)
T 3d3w_A 84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-----------------VTNH 146 (244)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------------CTTB
T ss_pred CccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC-----------------CCCC
Confidence 9965321111 223456788999999888887754 34 569999999876532 2345
Q ss_pred CchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHH
Q 017290 170 DAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFID 246 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 246 (374)
..|+.+|...|.+++.++.+ .+++++++||+.++++......... ..+..... ..+...+++++
T Consensus 147 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~----------~~~~~~~~~~~ 213 (244)
T 3d3w_A 147 SVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDP---HKAKTMLN----------RIPLGKFAEVE 213 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCST---THHHHHHH----------TCTTCSCBCHH
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccCh---HHHHHHHh----------hCCCCCCcCHH
Confidence 68999999999999998866 4799999999999987421000000 11111111 11234688999
Q ss_pred HHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 247 ECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 247 Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
|+|++++.++..+ .++.|+++++...
T Consensus 214 dva~~~~~l~~~~~~~~~G~~~~v~gG~~~ 243 (244)
T 3d3w_A 214 HVVNAILFLLSDRSGMTTGSTLPVEGGFWA 243 (244)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence 9999999998753 3678999887543
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.7e-24 Score=194.45 Aligned_cols=237 Identities=11% Similarity=-0.035 Sum_probs=170.4
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-------cccceeEEecccchhhHhhhcc-----
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-------MFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
+.+.+|+||||||+|+||+++++.|+++|++|++++|+........ ...+.++.+|+++.+.+..+++
T Consensus 22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 101 (302)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 3446689999999999999999999999999999999864322110 2346889999999988877765
Q ss_pred --CCCEEEEcccccCCc---ccccCCcceehhhhHHHHHHHHHHHHh-----CCCCeEEEeecccccCCCcccccccCCC
Q 017290 90 --GVDHVFNLAADMGGM---GFIQSNHSVIMYNNTMISFNMLEASRI-----SGVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~a~~~-----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|+|||+|+..... .....+.+..+++|+.++.++++++.. .+..++|++||...+.
T Consensus 102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~------------ 169 (302)
T 1w6u_A 102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET------------ 169 (302)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH------------
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc------------
Confidence 569999999964321 122233456788999999998877643 3345999999986653
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
+..+...|+.+|...|.+++.++.+ .+++++++|||.++++........... ....... .
T Consensus 170 -----~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~-~--------- 232 (302)
T 1w6u_A 170 -----GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT--FEKEMIG-R--------- 232 (302)
T ss_dssp -----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSH--HHHHHHT-T---------
T ss_pred -----CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchh--hHHHHHh-c---------
Confidence 2234568999999999999999876 689999999999998732100000011 1111111 1
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccCHHHHHHHHHHhcCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSMNEMAEIVLSFEDK 287 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s~~e~~~~i~~~~g~ 287 (374)
.+...+++++|+|++++.++... .+.+|+++++..+++.++++.+.+..|.
T Consensus 233 ~p~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~ 287 (302)
T 1w6u_A 233 IPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE 287 (302)
T ss_dssp CTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHH
T ss_pred CCcCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhccc
Confidence 11235789999999999988653 3678999999888888888887776654
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=3.6e-23 Score=185.63 Aligned_cols=234 Identities=11% Similarity=0.016 Sum_probs=156.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc---------cccccceeEEecccchhhHhhhcc-----
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT---------EDMFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------~~~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
+++|++|||||+|+||+++++.|+++|++|++++|++..... .....+.++.+|+++.+.+..+++
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999998643211 112246788999999998888776
Q ss_pred --CCCEEEEcccccCCccc-------ccCCcceehhhhHHHHHHHHHHHHhC----CCCeEEEeecccc-cCCCcccccc
Q 017290 90 --GVDHVFNLAADMGGMGF-------IQSNHSVIMYNNTMISFNMLEASRIS----GVKRFFYASSACI-YPEFKQLETN 155 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~~~-------~~~~~~~~~~~n~~~~~~ll~a~~~~----~~~~~i~~Ss~~v-y~~~~~~~~~ 155 (374)
++|+|||+|+....... ...+.+..+++|+.++.++++++... + .++|++||... +..
T Consensus 84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~------- 155 (278)
T 1spx_A 84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHA------- 155 (278)
T ss_dssp HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSC-------
T ss_pred cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccC-------
Confidence 89999999996532111 22334557889999999998877543 5 69999999866 431
Q ss_pred cCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCC-CCCcH---HHHHHHHhccCC
Q 017290 156 VSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKG-MEKAP---AAFCRKALTSTD 228 (374)
Q Consensus 156 ~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~-~~~~~---~~~~~~~~~~~~ 228 (374)
..+...|+.+|...+.+++.++.+ .+++++++|||.++++...... ..... ......... .
T Consensus 156 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~- 223 (278)
T 1spx_A 156 ----------TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKE-C- 223 (278)
T ss_dssp ----------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHH-H-
T ss_pred ----------CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHh-c-
Confidence 223467999999999999988765 5899999999999987532100 00000 000111111 0
Q ss_pred ceEeeCCCcccccceeHHHHHHHHHhhhccC-----CCCcEEecCCCccCHHHHHHHHHHhc
Q 017290 229 KFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-----FREPVNIGSDEMVSMNEMAEIVLSFE 285 (374)
Q Consensus 229 ~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~-----~~~~~~i~~~~~~s~~e~~~~i~~~~ 285 (374)
.+...+++.+|+|++++.++..+ .+..+++.++..+++.++++.+.+.+
T Consensus 224 --------~p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 224 --------VPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp --------CTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred --------CCCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 01235789999999999988642 37789999999999999999988754
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.1e-24 Score=190.95 Aligned_cols=237 Identities=13% Similarity=0.078 Sum_probs=172.8
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---------ccccceeEEecccchhhHhhhcc----
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---------DMFCHEFHLVDLRVMDNCLKVTK---- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~i~~~~~dl~~~~~~~~~~~---- 89 (374)
..++|++|||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999986532211 01156788999999998877765
Q ss_pred ---CCCEEEEcccccCCc----ccccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCC
Q 017290 90 ---GVDHVFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 90 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
++|++||+|+..... .....+.+..+++|+.++.++++++.. .+..++|++||...+..
T Consensus 88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------- 157 (281)
T 3svt_A 88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNT---------- 157 (281)
T ss_dssp HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC----------
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCC----------
Confidence 789999999963211 122223455788999999999887654 33349999999877532
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCC
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
..+...|+.+|...+.+++.++.+. ++++.+++||.++++..... ............
T Consensus 158 -------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~---------- 217 (281)
T 3svt_A 158 -------HRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI---TESAELSSDYAM---------- 217 (281)
T ss_dssp -------CTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH---HTCHHHHHHHHH----------
T ss_pred -------CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc---ccCHHHHHHHHh----------
Confidence 2345789999999999999998764 59999999999987632100 000111111111
Q ss_pred CcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC-HHHHHHHHHHhcCCCC
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS-MNEMAEIVLSFEDKKL 289 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s-~~e~~~~i~~~~g~~~ 289 (374)
..+...+.+++|+|++++.++... .++.+++.++..++ ..++.+++.+.++.+.
T Consensus 218 ~~p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~ 276 (281)
T 3svt_A 218 CTPLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA 276 (281)
T ss_dssp HCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred cCCCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence 112345778999999999988653 37899999888877 7788899988888753
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=178.31 Aligned_cols=211 Identities=15% Similarity=0.082 Sum_probs=157.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc------CCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK------GVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~------~~d~vi~~a~ 99 (374)
+|+||||||+|+||++++++|+++|++|++++|++. . ..+.++.+|+++.+.+.++++ ++|++||+|+
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag 75 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG 75 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----cceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence 578999999999999999999999999999999875 1 235788999999999888876 7899999999
Q ss_pred ccCCcccccC-------CcceehhhhHHHHHHHHHHHHhCC----------CCeEEEeecccccCCCcccccccCCCCCC
Q 017290 100 DMGGMGFIQS-------NHSVIMYNNTMISFNMLEASRISG----------VKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 100 ~~~~~~~~~~-------~~~~~~~~n~~~~~~ll~a~~~~~----------~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
.......... +.+..+++|+.++.++++++...- ..++|++||...+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------------- 141 (242)
T 1uay_A 76 VGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG-------------- 141 (242)
T ss_dssp CCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC--------------
T ss_pred ccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC--------------
Confidence 7542212111 345568899999999999886531 128999999877642
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
..+...|+.+|...+.+++.++.+. +++++++||+.++++... .....+... +....+ + .
T Consensus 142 ---~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~~~~-~~~~~~--~------~ 204 (242)
T 1uay_A 142 ---QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQ-----GLPEKAKAS-LAAQVP--F------P 204 (242)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHH-----TSCHHHHHH-HHTTCC--S------S
T ss_pred ---CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhh-----ccchhHHHH-HHhhCC--C------c
Confidence 2345689999999999998887653 899999999999987421 111222222 211111 1 0
Q ss_pred ccceeHHHHHHHHHhhhccC--CCCcEEecCCCccC
Q 017290 240 RSFTFIDECVEGVLRLTKSD--FREPVNIGSDEMVS 273 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~--~~~~~~i~~~~~~s 273 (374)
..+++++|+|++++.++..+ .++.+++.++..++
T Consensus 205 ~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 205 PRLGRPEEYAALVLHILENPMLNGEVVRLDGALRMA 240 (242)
T ss_dssp CSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCCCC
T ss_pred ccCCCHHHHHHHHHHHhcCCCCCCcEEEEcCCeecC
Confidence 34789999999999998764 47789998876553
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=179.94 Aligned_cols=221 Identities=13% Similarity=0.026 Sum_probs=159.8
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+...+++||||||+|+||++++++|+++|++|++++|+....... ....+.++.+|++|.+.+.++++
T Consensus 9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 445678999999999999999999999999999999986432111 12246889999999998887775
Q ss_pred -CCCEEEEcccccC-Cccc---ccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 -GVDHVFNLAADMG-GMGF---IQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 -~~d~vi~~a~~~~-~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|+|||+|+... .... ...+....+++|+.++.++++++.. .+..++|++||...+...
T Consensus 89 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------- 157 (260)
T 3awd_A 89 GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN----------- 157 (260)
T ss_dssp SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC-----------
Confidence 7999999999653 1111 1122355688999999999887754 455699999998664321
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+..+...|+.+|...|.+++.++.+ .+++++++||+.++++.... ......+...... . .
T Consensus 158 ----~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~-~---------~ 220 (260)
T 3awd_A 158 ----RPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRF---GMEKPELYDAWIA-G---------T 220 (260)
T ss_dssp ----SSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHH---HHTCHHHHHHHHH-T---------C
T ss_pred ----CCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhc---ccCChHHHHHHHh-c---------C
Confidence 2234478999999999999999876 68999999999999985310 0001122222221 1 1
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
....+++.+|+|++++.++..+ .+.+|+++++.
T Consensus 221 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 221 PMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGF 257 (260)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CcCCCCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence 1235789999999999988653 36789998764
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.89 E-value=6.8e-23 Score=181.91 Aligned_cols=227 Identities=15% Similarity=0.065 Sum_probs=162.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
..+|++|||||+|+||++++++|+++|++|++++|+....... ....+.++.+|++|.+.+.++++ ++|+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 85 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI 85 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3568999999999999999999999999999999986532211 11246788999999998887775 8999
Q ss_pred EEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhC----C-CCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 94 VFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRIS----G-VKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 94 vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~----~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
|||+|+....... ...+.+..+++|+.++.++++++... + ..++|++||...+..
T Consensus 86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------- 148 (259)
T 4e6p_A 86 LVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG----------------- 148 (259)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------------
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC-----------------
Confidence 9999997543222 22334556789999999998877542 2 348999999876532
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhc--cCCceEeeCCCcccc
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALT--STDKFEMWGDGLQTR 240 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 240 (374)
......|+.+|...+.+++.++.+. ++++.+++||.++++... ....++..... .......+....+..
T Consensus 149 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 222 (259)
T 4e6p_A 149 EALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWD------GVDALFARYENRPRGEKKRLVGEAVPFG 222 (259)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHH------HHHHHHHHHHTCCTTHHHHHHHHHSTTS
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhh------hhhhhhhhhccCChHHHHHHHhccCCCC
Confidence 2234689999999999999998664 799999999999987421 11111111111 011111122233456
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
++.+++|+|++++.++... .++++++++|..+|
T Consensus 223 r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 223 RMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp SCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred CCcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence 7899999999999888643 37899999887654
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-23 Score=185.94 Aligned_cols=224 Identities=14% Similarity=0.083 Sum_probs=158.4
Q ss_pred cCCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC-Cccccc------ccccceeEEecccchhhHhhhcc-
Q 017290 18 REPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK-NEHMTE------DMFCHEFHLVDLRVMDNCLKVTK- 89 (374)
Q Consensus 18 ~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~- 89 (374)
..+.+...+|+||||||+|+||+++++.|+++|++|++++|.. ...... ....+.++.+|++|.+.+.++++
T Consensus 13 ~~~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 92 (274)
T 1ja9_A 13 SDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDK 92 (274)
T ss_dssp ---CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 3344556778999999999999999999999999999999843 221110 12246788999999998888776
Q ss_pred ------CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHHhC---CCCeEEEeeccccc-CCCccccccc
Q 017290 90 ------GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRIS---GVKRFFYASSACIY-PEFKQLETNV 156 (374)
Q Consensus 90 ------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~~---~~~~~i~~Ss~~vy-~~~~~~~~~~ 156 (374)
++|+|||+|+...... ....+.+..+++|+.++.++++++... + .++|++||...+ ..
T Consensus 93 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~-------- 163 (274)
T 1ja9_A 93 AVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTG-------- 163 (274)
T ss_dssp HHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCS--------
T ss_pred HHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCC--------
Confidence 8999999999653211 122233567889999999999988764 4 599999998776 31
Q ss_pred CCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCC-----C--CCCcH-HHHHHHHhc
Q 017290 157 SLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWK-----G--MEKAP-AAFCRKALT 225 (374)
Q Consensus 157 ~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~-----~--~~~~~-~~~~~~~~~ 225 (374)
..+...|+.+|...|.+++.++.+. +++++++||+.++++..... . ..... ..+....
T Consensus 164 ---------~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 232 (274)
T 1ja9_A 164 ---------IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGL-- 232 (274)
T ss_dssp ---------CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHH--
T ss_pred ---------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHH--
Confidence 1234679999999999999988764 89999999999987531100 0 00011 1111111
Q ss_pred cCCceEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 226 STDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 226 ~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
..+.+...+++++|+|++++.++..+ .+++|+++++
T Consensus 233 --------~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG 272 (274)
T 1ja9_A 233 --------ANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 272 (274)
T ss_dssp --------HHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --------HhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence 11223456899999999999998753 3678999875
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=180.27 Aligned_cols=219 Identities=14% Similarity=0.057 Sum_probs=159.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-------cccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-------MFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
..+|++|||||+|+||+++++.|+++|++|++++|+........ ...+.++.+|++|.+.+.++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG 84 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45689999999999999999999999999999999864322110 2246788999999998887775
Q ss_pred CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|+|||+|+....... ...+.+..+++|+.++..+++++. +.+..++|++||...+..
T Consensus 85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------- 150 (263)
T 3ai3_A 85 GADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQP-------------- 150 (263)
T ss_dssp SCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC--------------
Confidence 79999999997532211 222345568899999888887764 455679999999887642
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcH-----------HHHHHHHhccCC
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAP-----------AAFCRKALTSTD 228 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~-----------~~~~~~~~~~~~ 228 (374)
..+...|+.+|...+.+++.++.+ .+++++++|||.++++... ... ..+...... .
T Consensus 151 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~- 220 (263)
T 3ai3_A 151 ---LWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWI-----KTAKELTKDNGGDWKGYLQSVAD-E- 220 (263)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH-----HHHHHHTTTTTCCHHHHHHHHHH-H-
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchh-----hhhHhhhcccCCcHHHHHHHHHh-c-
Confidence 123468999999999999998876 5899999999999987311 000 011111110 0
Q ss_pred ceEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 229 KFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 229 ~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
..+...+++.+|+|++++.++..+ .+..|++.++..++
T Consensus 221 -------~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 221 -------HAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp -------HCTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred -------CCCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence 012345889999999999988754 36789998887654
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-23 Score=180.59 Aligned_cols=190 Identities=16% Similarity=0.091 Sum_probs=146.7
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc-ccceeEEecccchhhHhhhcc---CCCEEEEcccccC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM-FCHEFHLVDLRVMDNCLKVTK---GVDHVFNLAADMG 102 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~i~~~~~dl~~~~~~~~~~~---~~d~vi~~a~~~~ 102 (374)
|+||||||+|+||++++++|+++ +|++++|++........ ...+++.+|++|.+.+.++++ ++|+|||+|+...
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~ 78 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDLLVHAVGKAG 78 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEEEEECCCCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcCC
Confidence 68999999999999999999998 99999997643221110 011778899999999999887 8999999999753
Q ss_pred Ccc---cccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHH
Q 017290 103 GMG---FIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAS 179 (374)
Q Consensus 103 ~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~ 179 (374)
... ....+.+..+++|+.++.++++++++.+..+||++||..+|. +..+...|+.+|...
T Consensus 79 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~-----------------~~~~~~~Y~~sK~a~ 141 (207)
T 2yut_A 79 RASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYV-----------------QVPGFAAYAAAKGAL 141 (207)
T ss_dssp CBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHH-----------------SSTTBHHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhcc-----------------CCCCcchHHHHHHHH
Confidence 211 123344567889999999999999766667999999988763 223457899999999
Q ss_pred HHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhh
Q 017290 180 EELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 256 (374)
Q Consensus 180 E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~ 256 (374)
|.+++.++.+ .+++++++||+.++++.. . +.+....++++++|+|++++.++
T Consensus 142 ~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~-----------------~--------~~~~~~~~~~~~~dva~~~~~~~ 196 (207)
T 2yut_A 142 EAYLEAARKELLREGVHLVLVRLPAVATGLW-----------------A--------PLGGPPKGALSPEEAARKVLEGL 196 (207)
T ss_dssp HHHHHHHHHHHHTTTCEEEEECCCCBCSGGG-----------------G--------GGTSCCTTCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhCCEEEEEecCcccCCCc-----------------c--------ccCCCCCCCCCHHHHHHHHHHHH
Confidence 9999998876 589999999999997631 0 11123467999999999999999
Q ss_pred ccCC
Q 017290 257 KSDF 260 (374)
Q Consensus 257 ~~~~ 260 (374)
+++.
T Consensus 197 ~~~~ 200 (207)
T 2yut_A 197 FREP 200 (207)
T ss_dssp C--C
T ss_pred hCCC
Confidence 8764
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=9.4e-23 Score=181.46 Aligned_cols=222 Identities=18% Similarity=0.128 Sum_probs=154.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc----c--c-------ccceeEEecccchhhHhhhccC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE----D--M-------FCHEFHLVDLRVMDNCLKVTKG 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--~-------~~i~~~~~dl~~~~~~~~~~~~ 90 (374)
+++++||||||+|+||+++++.|+++|++|++++|+....... . . ..+.++.+|++|.+.+.++++.
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 84 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ 84 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence 3568999999999999999999999999999999986432111 0 0 3467889999999888777653
Q ss_pred -------C-CEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhC----C-CCeEEEeecccccCCCccccc
Q 017290 91 -------V-DHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRIS----G-VKRFFYASSACIYPEFKQLET 154 (374)
Q Consensus 91 -------~-d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~----~-~~~~i~~Ss~~vy~~~~~~~~ 154 (374)
+ |+|||+|+....... ...+.+..+++|+.++.++++++... + ..+||++||...+.
T Consensus 85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~------- 157 (264)
T 2pd6_A 85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV------- 157 (264)
T ss_dssp HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH-------
T ss_pred HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc-------
Confidence 4 999999997542111 22344567889999999999887653 3 45999999975532
Q ss_pred ccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceE
Q 017290 155 NVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFE 231 (374)
Q Consensus 155 ~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (374)
+..+...|+.+|...|.+++.++.+ .+++++++||+.++++... .....+... +
T Consensus 158 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~~~~-~------- 214 (264)
T 2pd6_A 158 ----------GNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQ-----KVPQKVVDK-I------- 214 (264)
T ss_dssp ----------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---------------C-T-------
T ss_pred ----------CCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchh-----hcCHHHHHH-H-------
Confidence 1224468999999999999998776 6899999999999988532 111111111 0
Q ss_pred eeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccCHHHH
Q 017290 232 MWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSMNEM 277 (374)
Q Consensus 232 ~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s~~e~ 277 (374)
........+++.+|+|++++.++..+ .+..+++.++..++....
T Consensus 215 --~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~ 262 (264)
T 2pd6_A 215 --TEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAENLY 262 (264)
T ss_dssp --GGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred --HHhCCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence 01112235789999999999988753 377899998877665543
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.89 E-value=9.5e-23 Score=181.70 Aligned_cols=220 Identities=16% Similarity=0.139 Sum_probs=146.6
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhc-------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVT------- 88 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~------- 88 (374)
|.+.+|+||||||+|+||+++++.|+++|++|++++|++...... ....+.++.+|+.+.+.+.+++
T Consensus 10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (266)
T 1xq1_A 10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF 89 (266)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 445678999999999999999999999999999999986432211 1124678899999988887776
Q ss_pred -cCCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 89 -KGVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 89 -~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
.++|+|||+|+...... ....+.+..+++|+.++.++++++ ++.+..++|++||...+..
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------ 157 (266)
T 1xq1_A 90 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS------------ 157 (266)
T ss_dssp TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------------
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC------------
Confidence 47899999999653211 122234556889999999998887 4566779999999876532
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
..+...|+.+|...|.+++.++.+. +++++++||+.++++..... ....+..... ...
T Consensus 158 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~----------~~~ 218 (266)
T 1xq1_A 158 -----ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV----YDDEFKKVVI----------SRK 218 (266)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------
T ss_pred -----CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhh----cCHHHHHHHH----------hcC
Confidence 2245689999999999999988764 89999999999998853210 0001111100 111
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
....+++.+|+|++++.++..+ .+..+++.++..+
T Consensus 219 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~ 257 (266)
T 1xq1_A 219 PLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTV 257 (266)
T ss_dssp -----CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEEE
T ss_pred CCCCCcCHHHHHHHHHHHcCccccCccCcEEEEcCCccc
Confidence 1235789999999999988653 3678888877543
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.89 E-value=4e-22 Score=175.89 Aligned_cols=215 Identities=18% Similarity=0.126 Sum_probs=155.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc-------CC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
+|++|||||+|+||++++++|+++|++|++++|+...... .....+.++.+|++|.+.+.++++ ++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999999999998643211 112346888999999998888775 79
Q ss_pred CEEEEcccccCCcc---c---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 92 DHVFNLAADMGGMG---F---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 92 d~vi~~a~~~~~~~---~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
|+|||+|+...... . ...+.+..+++|+.++..+++++ ++.+.+++|++||...+..
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------------- 148 (250)
T 2cfc_A 82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVA------------- 148 (250)
T ss_dssp CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------------
T ss_pred CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC-------------
Confidence 99999999753211 1 12234556788999887766654 4456679999999876532
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
..+...|+.+|...|.+++.++.+. +++++++||+.++++..... .....+...... . ..
T Consensus 149 ----~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~-~---------~~ 211 (250)
T 2cfc_A 149 ----FPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWR---LDQPELRDQVLA-R---------IP 211 (250)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHH---HTSHHHHHHHHT-T---------CT
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccc---cCCHHHHHHHHh-c---------CC
Confidence 2245689999999999999988765 89999999999999853210 000112222221 1 12
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
...+.+.+|+|++++.++..+ .+..+++.++.
T Consensus 212 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 247 (250)
T 2cfc_A 212 QKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAY 247 (250)
T ss_dssp TCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred CCCCcCHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence 235789999999999998764 26778887764
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.3e-21 Score=171.04 Aligned_cols=223 Identities=15% Similarity=0.101 Sum_probs=150.1
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEEE
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHVF 95 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi 95 (374)
.+++|++|||||+|+||+++++.|+++|++|++++|+.... ..++.++.+|++|.+.+.++++ ++|++|
T Consensus 4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv 79 (250)
T 2fwm_X 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE----QYPFATEVMDVADAAQVAQVCQRLLAETERLDALV 79 (250)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS----CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh----cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 34668999999999999999999999999999999986531 1236788999999998887775 799999
Q ss_pred EcccccCCcc---cccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 96 NLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 96 ~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
|+|+...... ....+.+..+++|+.++..+++++ ++.+..++|++||...+. +..+
T Consensus 80 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------------~~~~ 142 (250)
T 2fwm_X 80 NAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT-----------------PRIG 142 (250)
T ss_dssp ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------------CCTT
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC-----------------CCCC
Confidence 9999753211 122344567889999999998877 455567999999987653 2234
Q ss_pred CCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeH
Q 017290 169 QDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
...|+.+|...+.+.+.++.+ .+++++++||+.++++...... .........+... ...+....+...+.+.
T Consensus 143 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~p~~~~~~p 217 (250)
T 2fwm_X 143 MSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLW---VSDDAEEQRIRGF--GEQFKLGIPLGKIARP 217 (250)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------------------CH
T ss_pred CchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccc---cChhHHHHHHhhh--hhcccccCCCCCCcCH
Confidence 568999999999999998766 4899999999999987421100 0000000000000 0000001122357899
Q ss_pred HHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 246 DECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 246 ~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+|+|++++.++..+ .+..+++.++..
T Consensus 218 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 247 (250)
T 2fwm_X 218 QEIANTILFLASDLASHITLQDIVVDGGST 247 (250)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 99999999988753 367888887654
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-22 Score=177.41 Aligned_cols=221 Identities=14% Similarity=0.030 Sum_probs=156.1
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccc-eeEEecccchhhHhhhc------cCC
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCH-EFHLVDLRVMDNCLKVT------KGV 91 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i-~~~~~dl~~~~~~~~~~------~~~ 91 (374)
+.+.++++|||||+|+||++++++|+++|++|++++|++....... ...+ .++.+|++|.+.+.+++ .++
T Consensus 7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i 86 (254)
T 2wsb_A 7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPV 86 (254)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCC
Confidence 3456789999999999999999999999999999999865322111 1234 77889999998887776 479
Q ss_pred CEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|+|||+|+........+ .+.+..+++|+.++..+++++ ++.+..+||++||...+...
T Consensus 87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--------------- 151 (254)
T 2wsb_A 87 SILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN--------------- 151 (254)
T ss_dssp CEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------
T ss_pred cEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC---------------
Confidence 99999999754221221 223456789999977666654 45566799999998775421
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
+..+...|+.+|...|.+++.++.+. +++++++||+.++++..... .....+...... . .....
T Consensus 152 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~-~---------~~~~~ 218 (254)
T 2wsb_A 152 RPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKM---RERPELFETWLD-M---------TPMGR 218 (254)
T ss_dssp SSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHH---HTCHHHHHHHHH-T---------STTSS
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcc---ccChHHHHHHHh-c---------CCCCC
Confidence 22344789999999999999988764 89999999999998632100 000111222111 1 11245
Q ss_pred ceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 242 FTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
+++++|+|++++.++..+ .+..+++.++.
T Consensus 219 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 251 (254)
T 2wsb_A 219 CGEPSEIAAAALFLASPAASYVTGAILAVDGGY 251 (254)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCHHHHHHHHHHHhCcccccccCCEEEECCCE
Confidence 789999999999988653 36788887653
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.5e-22 Score=177.02 Aligned_cols=218 Identities=13% Similarity=-0.006 Sum_probs=157.6
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCC
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
...+|++|||||+|+||+++++.|+++|++|++++|++...... ...++.++.+|++|.+.+.++++ ++|
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD 88 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFD 88 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 34568999999999999999999999999999999986432211 01146788999999998888776 899
Q ss_pred EEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 93 HVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 93 ~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
+|||+|+....... ...+.+..+++|+.++.++++++.. .+ ..++|++||...+..
T Consensus 89 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------- 152 (263)
T 3ak4_A 89 LLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG---------------- 152 (263)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC----------------
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC----------------
Confidence 99999997532111 2223455788999999888887653 34 569999999866431
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcH-----------HHHHHHHhccCCce
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAP-----------AAFCRKALTSTDKF 230 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 230 (374)
..+...|+.+|...+.+++.++.+. +++++++||+.++++... ... ........
T Consensus 153 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~------ 220 (263)
T 3ak4_A 153 -APLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQE-----REIIWEAELRGMTPEAVRAEYV------ 220 (263)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHH-----HHHHHHHHHHTSCHHHHHHHHH------
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhh-----hhccccccccccCcHHHHHHHH------
Confidence 1234689999999999999987664 899999999999876310 000 01111111
Q ss_pred EeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 231 EMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 231 ~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
...+...+++.+|+|++++.++..+ .+..+++.++..+
T Consensus 221 ----~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~ 262 (263)
T 3ak4_A 221 ----SLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVRM 262 (263)
T ss_dssp ----HTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred ----hcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCEeC
Confidence 1112345889999999999988754 3678999887543
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=6e-22 Score=175.45 Aligned_cols=223 Identities=17% Similarity=0.087 Sum_probs=157.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc--ccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM--FCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
+.+|++|||||+|+||+++++.|+++|++|++++|+... ..... .. .++.+|++|.+.+.++++ ++|+|
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 81 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVL 81 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 356899999999999999999999999999999998764 21110 02 678899999888877664 78999
Q ss_pred EEcccccCCcccc---cCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 95 FNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 95 i~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
||+|+........ ..+.+..+++|+.++.++++++. +.+..++|++||...+.. ..
T Consensus 82 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------------~~ 144 (256)
T 2d1y_A 82 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA-----------------EQ 144 (256)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB-----------------CT
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCC-----------------CC
Confidence 9999975422111 22345678899999999988764 345669999999866431 12
Q ss_pred CCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccccee
Q 017290 168 PQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
+...|+.+|...+.+++.++.+ .++++.+++||.+..+. ...++............+....+...+++
T Consensus 145 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (256)
T 2d1y_A 145 ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA---------VLEAIALSPDPERTRRDWEDLHALRRLGK 215 (256)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH---------HHHHHC--------CHHHHTTSTTSSCBC
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch---------hhhccccccCCHHHHHHHHhcCCCCCCcC
Confidence 3468999999999999998765 37999999999997642 11110000000010111112223456899
Q ss_pred HHHHHHHHHhhhccC----CCCcEEecCCCccCH
Q 017290 245 IDECVEGVLRLTKSD----FREPVNIGSDEMVSM 274 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s~ 274 (374)
.+|+|++++.++..+ .+..+++.++..+++
T Consensus 216 ~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~~ 249 (256)
T 2d1y_A 216 PEEVAEAVLFLASEKASFITGAILPVDGGMTASF 249 (256)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred HHHHHHHHHHHhCchhcCCCCCEEEECCCccccc
Confidence 999999999988764 367899988765543
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-21 Score=173.19 Aligned_cols=219 Identities=16% Similarity=0.133 Sum_probs=156.5
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhcc-------CCC
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
...+|++|||||+|+||+++++.|+++|++|++++|+........ ...+.++.+|++|.+.+.++++ ++|
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 83 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVH 83 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 346689999999999999999999999999999999876533221 2256888999999998887775 899
Q ss_pred EEEEcccccCCcc-------cccCCcceehhhhHHHHHHHHHHHHhC----------CCCeEEEeecccccCCCcccccc
Q 017290 93 HVFNLAADMGGMG-------FIQSNHSVIMYNNTMISFNMLEASRIS----------GVKRFFYASSACIYPEFKQLETN 155 (374)
Q Consensus 93 ~vi~~a~~~~~~~-------~~~~~~~~~~~~n~~~~~~ll~a~~~~----------~~~~~i~~Ss~~vy~~~~~~~~~ 155 (374)
++||+|+...... ....+.+..+++|+.++..+++++... +..++|++||...+.
T Consensus 84 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~-------- 155 (257)
T 3tpc_A 84 GLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD-------- 155 (257)
T ss_dssp EEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH--------
T ss_pred EEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc--------
Confidence 9999999764221 112334556889999999999887652 334899999987653
Q ss_pred cCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEe
Q 017290 156 VSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEM 232 (374)
Q Consensus 156 ~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (374)
+..+...|+.+|...+.+.+.++.+ .++++.+++||.+.++... ...... ...+
T Consensus 156 ---------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~-----~~~~~~-~~~~-------- 212 (257)
T 3tpc_A 156 ---------GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMA-----GMPQDV-QDAL-------- 212 (257)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------------------
T ss_pred ---------CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhc-----cCCHHH-HHHH--------
Confidence 2234568999999999999888876 6899999999999887421 111111 1111
Q ss_pred eCCCccc-ccceeHHHHHHHHHhhhccC--CCCcEEecCCCccC
Q 017290 233 WGDGLQT-RSFTFIDECVEGVLRLTKSD--FREPVNIGSDEMVS 273 (374)
Q Consensus 233 ~~~~~~~-~~~i~~~Dva~~i~~~~~~~--~~~~~~i~~~~~~s 273 (374)
....+. ..+.+.+|+|++++.++... .+..+++.+|..++
T Consensus 213 -~~~~p~~~r~~~~~dva~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 213 -AASVPFPPRLGRAEEYAALVKHICENTMLNGEVIRLDGALRMA 255 (257)
T ss_dssp --CCSSSSCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred -HhcCCCCCCCCCHHHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence 111122 45789999999999998765 47889998876654
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.3e-22 Score=177.57 Aligned_cols=224 Identities=17% Similarity=0.084 Sum_probs=158.4
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhc-------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVT------- 88 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~------- 88 (374)
|.+.+|++|||||+|+||+++++.|+++|++|++++|++...... ...++.++.+|++|.+.+.+++
T Consensus 5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 345678999999999999999999999999999999986532211 1124678899999998887776
Q ss_pred -cCCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 89 -KGVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 89 -~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
.++|++||+|+...... ....+.+..+++|+.++.++++++. +.+..++|++||...+..
T Consensus 85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------ 152 (260)
T 2ae2_A 85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA------------ 152 (260)
T ss_dssp TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC------------
T ss_pred CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC------------
Confidence 47999999999753211 1222345578899999999988873 456679999999876531
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
..+...|+.+|...|.+++.++.+. ++++.+++||.+..+..............+.... ...
T Consensus 153 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~----------~~~ 217 (260)
T 2ae2_A 153 -----VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLI----------DRC 217 (260)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHH----------HTS
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHH----------hcC
Confidence 2234689999999999999988664 7999999999998652100000000000000111 111
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
+...+++.+|+|++++.++..+ .+..+++.++...
T Consensus 218 ~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~ 256 (260)
T 2ae2_A 218 ALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA 256 (260)
T ss_dssp TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence 2345889999999999988653 3678888877544
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.1e-22 Score=174.41 Aligned_cols=215 Identities=16% Similarity=0.118 Sum_probs=146.7
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEE-eCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIAS-DWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
.+.+|+||||||+|+||++++++|+++|++|+++ .|++...... ....+.++.+|++|.+.+.++++
T Consensus 2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 3456899999999999999999999999999999 5554322111 12246788999999998887775
Q ss_pred -CCCEEEEcccccCCc---ccccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccc-cCCCcccccccCCCC
Q 017290 90 -GVDHVFNLAADMGGM---GFIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACI-YPEFKQLETNVSLKE 160 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~v-y~~~~~~~~~~~~~e 160 (374)
++|+|||+|+..... .....+.+..+++|+.++.++++++. +.+..++|++||... |+.
T Consensus 82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------ 149 (247)
T 2hq1_A 82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN------------ 149 (247)
T ss_dssp SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------------
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC------------
Confidence 799999999975321 12334456678899999888877764 346679999999743 321
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
.+...|+.+|...|.+++.++.+. ++++++++|+.+.++... ........... ...
T Consensus 150 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~~~~~~----------~~~ 208 (247)
T 2hq1_A 150 ------AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTD-----VLPDKVKEMYL----------NNI 208 (247)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-----TSCHHHHHHHH----------TTS
T ss_pred ------CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchh-----hcchHHHHHHH----------hhC
Confidence 234689999999999999987654 799999999999765211 11111111111 111
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
+...+++.+|+|++++.++..+ .+++|+++++.
T Consensus 209 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 209 PLKRFGTPEEVANVVGFLASDDSNYITGQVINIDGGL 245 (247)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence 2345889999999999888653 36789998764
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6.1e-23 Score=182.32 Aligned_cols=219 Identities=19% Similarity=0.130 Sum_probs=158.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
+.+|++|||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|+.+.+.+..+++ +
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 91 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG 91 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999986432211 11246778899999888877765 7
Q ss_pred CCEEEEcccccCC-c---ccccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 91 VDHVFNLAADMGG-M---GFIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 91 ~d~vi~~a~~~~~-~---~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
+|+|||+|+.... . +....+.+..+++|+.++.++++++. +.+..++|++||...|..
T Consensus 92 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------- 157 (260)
T 2zat_A 92 VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHP-------------- 157 (260)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC--------------
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCC--------------
Confidence 9999999996431 1 11222345678899999988887764 456679999999887642
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcH-HHHHHHHhccCCceEeeCCCcc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAP-AAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
..+...|+.+|...+.+++.++.+. ++++.+++||.+..+... ... .......+ ....+
T Consensus 158 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~~~~~~~---------~~~~~ 220 (260)
T 2zat_A 158 ---FPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQ-----VLWMDKARKEYM---------KESLR 220 (260)
T ss_dssp ---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTH-----HHHSSHHHHHHH---------HHHHT
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccch-----hcccChHHHHHH---------HhcCC
Confidence 2244689999999999999987664 799999999999876421 000 00000000 01112
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
..++.+.+|+|++++.++..+ .+.++++++|..++
T Consensus 221 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 221 IRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR 259 (260)
T ss_dssp CSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred CCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence 345789999999999988754 37789999887765
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-22 Score=177.24 Aligned_cols=214 Identities=17% Similarity=0.056 Sum_probs=154.2
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
+++++||||||+|+||+++++.|+++|++|++++|++...... ....+.++.+|+.|.+.+.++++
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD 84 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 4568999999999999999999999999999999976432211 12246788999999998888775
Q ss_pred CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|+|||+|+....... ...+.+..+++|+.++.++++++ ++.+.+++|++||...+..
T Consensus 85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------------- 150 (248)
T 2pnf_A 85 GIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTG-------------- 150 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHC--------------
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCC--------------
Confidence 79999999997542111 22234567889999996666544 4556679999999754321
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
..+...|+.+|...+.+++.++.+ .+++++++||+.++++... .....+... .... .+.
T Consensus 151 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~-----~~~~~~~~~-~~~~---------~~~ 212 (248)
T 2pnf_A 151 ---NVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTA-----VLSEEIKQK-YKEQ---------IPL 212 (248)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG-----GSCHHHHHH-HHHT---------CTT
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhh-----hccHHHHHH-HHhc---------CCC
Confidence 123468999999999999988765 3799999999999987432 111111111 1111 112
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
..+++++|+|++++.++... .++.|+++++
T Consensus 213 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 246 (248)
T 2pnf_A 213 GRFGSPEEVANVVLFLCSELASYITGEVIHVNGG 246 (248)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence 35789999999999988653 3778998875
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-21 Score=172.10 Aligned_cols=215 Identities=16% Similarity=0.058 Sum_probs=159.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
++|++|||||+|+||+++++.|+++|++|++++++....... ....+.++.+|++|.+.+..+++ +
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 568899999999999999999999999999988765321110 12246788999999998887775 7
Q ss_pred CCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 91 VDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+|++||+|+...... ....+.+..+++|+.++.++++++ ++.+..++|++||...+.
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------- 146 (246)
T 3osu_A 83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAV---------------- 146 (246)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----------------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC----------------
Confidence 999999999764221 222334557899999999999887 455556999999976642
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
+..+...|+.+|...+.+.+.++.+ .++++.+++||.+.++... .....+...... ..+..
T Consensus 147 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~-----~~~~~~~~~~~~----------~~p~~ 210 (246)
T 3osu_A 147 -GNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD-----ALSDELKEQMLT----------QIPLA 210 (246)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCS-----CSCHHHHHHHHT----------TCTTC
T ss_pred -CCCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccc-----ccCHHHHHHHHh----------cCCCC
Confidence 2234568999999999999988764 5799999999999987532 122333333221 12234
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
.+.+.+|+|++++.++..+ .+.++++++|..
T Consensus 211 r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~~ 245 (246)
T 3osu_A 211 RFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMY 245 (246)
T ss_dssp SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTSC
T ss_pred CCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence 5788999999999988754 378899987643
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-21 Score=175.67 Aligned_cols=233 Identities=14% Similarity=0.038 Sum_probs=163.1
Q ss_pred CCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc------------------ccccccceeEEecccch
Q 017290 20 PYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM------------------TEDMFCHEFHLVDLRVM 81 (374)
Q Consensus 20 ~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------------~~~~~~i~~~~~dl~~~ 81 (374)
+..+..++++|||||+|+||+++++.|+++|++|++++|+..... ......+.++.+|++|.
T Consensus 7 ~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 86 (278)
T 3sx2_A 7 SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDR 86 (278)
T ss_dssp --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCH
T ss_pred CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence 344567799999999999999999999999999999998732100 00112567889999999
Q ss_pred hhHhhhcc-------CCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccccCCC
Q 017290 82 DNCLKVTK-------GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACIYPEF 149 (374)
Q Consensus 82 ~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~vy~~~ 149 (374)
+.+.++++ ++|++||+|+..... ....+.+..+++|+.++..+++++.. .+ ..++|++||...+...
T Consensus 87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 165 (278)
T 3sx2_A 87 ESLSAALQAGLDELGRLDIVVANAGIAPMS-AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGV 165 (278)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCCCCS-STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCC
Confidence 98887775 799999999975422 23345567889999999999887643 22 3489999998765322
Q ss_pred cccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhcc
Q 017290 150 KQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTS 226 (374)
Q Consensus 150 ~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~ 226 (374)
.. +..+...|+.+|...+.+++.++.+. ++++.+++||.+..+... ......++......
T Consensus 166 ~~-------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~----~~~~~~~~~~~~~~ 228 (278)
T 3sx2_A 166 GS-------------ADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMIN----NEFTREWLAKMAAA 228 (278)
T ss_dssp CC-------------SSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTS----SHHHHHHHHHHHHH
T ss_pred cc-------------CCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccch----hhhHHHHHhhccch
Confidence 10 11234679999999999999988654 699999999999987532 11122222222211
Q ss_pred CCceEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 227 TDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 227 ~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
.......+...+ ..+++.+|+|++++.++... .+..+++.+|..
T Consensus 229 ~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~ 276 (278)
T 3sx2_A 229 TDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFL 276 (278)
T ss_dssp CC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred hhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCcc
Confidence 221222233333 67899999999999998653 378889887653
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-21 Score=172.89 Aligned_cols=215 Identities=19% Similarity=0.081 Sum_probs=161.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhcc-------CCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
..+|++|||||+|+||+++++.|+++|++|++++|+........ ...+.++.+|++|.+.+.++++ ++|+
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 88 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI 88 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46789999999999999999999999999999999876532211 2356788999999998888775 7999
Q ss_pred EEEcccccCC-c----ccccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 94 VFNLAADMGG-M----GFIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 94 vi~~a~~~~~-~----~~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
+||+|+.... . .....+.+..+++|+.++..+++++ ++.+..++|++||...+..
T Consensus 89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~---------------- 152 (271)
T 3tzq_B 89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAA---------------- 152 (271)
T ss_dssp EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSB----------------
T ss_pred EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCC----------------
Confidence 9999997521 1 1122334567889999999999888 5666669999999876532
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
..+...|+.+|...+.+++.++.+ .++++.+++||.++++.... ............ ......
T Consensus 153 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~----~~~~~~~~~~~~----------~~~~~r 217 (271)
T 3tzq_B 153 -YDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEV----GLPQPIVDIFAT----------HHLAGR 217 (271)
T ss_dssp -CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-------CHHHHHHHHT----------TSTTSS
T ss_pred -CCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccc----cCCHHHHHHHHh----------cCCCCC
Confidence 234568999999999999999876 68999999999999875321 111222222211 112335
Q ss_pred ceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 242 FTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
+...+|+|++++.++... .+.++++.+|
T Consensus 218 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 249 (271)
T 3tzq_B 218 IGEPHEIAELVCFLASDRAAFITGQVIAADSG 249 (271)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence 788999999999988754 3788999877
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-21 Score=172.20 Aligned_cols=220 Identities=13% Similarity=0.042 Sum_probs=161.3
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc-----
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
+...+|++|||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++
T Consensus 6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (262)
T 3pk0_A 6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE 85 (262)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 445779999999999999999999999999999999986532211 11356789999999998887765
Q ss_pred --CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhC----CCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 --GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRIS----GVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~----~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+|+....... ...+.+..+++|+.++..+++++... +..++|++||...+..
T Consensus 86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~------------ 153 (262)
T 3pk0_A 86 FGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPIT------------ 153 (262)
T ss_dssp HSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTB------------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC------------
Confidence 89999999997643222 22234556889999999988877543 6669999999754210
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+..+...|+.+|...+.+.+.++.+ .++++.+++||.++++... .....+...... ..
T Consensus 154 ----~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~-----~~~~~~~~~~~~----------~~ 214 (262)
T 3pk0_A 154 ----GYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLL-----ENGEEYIASMAR----------SI 214 (262)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH-----TTCHHHHHHHHT----------TS
T ss_pred ----CCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccc-----ccCHHHHHHHHh----------cC
Confidence 2234568999999999999999876 5899999999999886321 111222222221 11
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
....+.+.+|+|++++.++..+ .+..+++.+|..+
T Consensus 215 p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 253 (262)
T 3pk0_A 215 PAGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVL 253 (262)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred CCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence 2235788999999999988654 3788999887654
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-21 Score=172.27 Aligned_cols=216 Identities=17% Similarity=0.082 Sum_probs=155.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEEEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHVFN 96 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi~ 96 (374)
+.+|+||||||+|+||+++++.|+++|++|++++|++.. ..++.++.+|++|.+.+.++++ ++|+|||
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 456899999999999999999999999999999998654 2346788999999998887765 7999999
Q ss_pred cccccCCccc---ccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 97 LAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 97 ~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
+|+....... ...+.+..+++|+.++..+++++.. .+..++|++||...+.. ..+.
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~~~ 143 (264)
T 2dtx_A 81 NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII-----------------TKNA 143 (264)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSC-----------------CTTB
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccC-----------------CCCc
Confidence 9997542111 2233456788999998888887753 45569999999877532 2244
Q ss_pred CchHHhHHHHHHHHHHHHhhhC--CcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccC-----CceEeeCCCcccccc
Q 017290 170 DAYGLEKLASEELCKHYTKDFG--IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTST-----DKFEMWGDGLQTRSF 242 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 242 (374)
..|+.+|...+.+++.++.+.. +++.+++||.+..+. ...+........ .....+....+...+
T Consensus 144 ~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 214 (264)
T 2dtx_A 144 SAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPL---------VRKAAELEVGSDPMRIEKKISEWGHEHPMQRI 214 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHH---------HHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSC
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcc---------hhhhhhcccccCchhhHHHHHHHHhcCCCCCC
Confidence 6899999999999999987655 899999999997652 111100000000 000000011123358
Q ss_pred eeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 243 TFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
++.+|+|++++.++..+ .+..+++.++.
T Consensus 215 ~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 246 (264)
T 2dtx_A 215 GKPQEVASAVAFLASREASFITGTCLYVDGGL 246 (264)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 89999999999988753 36778888764
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-21 Score=172.37 Aligned_cols=220 Identities=17% Similarity=0.053 Sum_probs=155.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc--c--ccccceeEEecccchhhHhhhcc-------CCCE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT--E--DMFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~--~~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
.+|++|||||+|+||+++++.|+++|++|++++|+...... . ....+.++.+|++|.+.+..+++ ++|+
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI 82 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 56899999999999999999999999999999998652110 0 11246778899999998888876 8999
Q ss_pred EEEcccccCCccc---ccCCcceehhhhHHHHHHHHHH----HHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 94 VFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEA----SRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 94 vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a----~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
|||+|+....... ...+.+..+++|+.++..++++ +++.+..++|++||...+.. .
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~ 145 (255)
T 2q2v_A 83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVG-----------------S 145 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------------C
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccC-----------------C
Confidence 9999997532111 2223455788999876666554 45666679999999876532 1
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHH--HHhccCCc---eEee-CCCc
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCR--KALTSTDK---FEMW-GDGL 237 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~-~~~~ 237 (374)
.+...|+.+|...+.+.+.++.+ .++++++++||.++++.. ..... ... .... ...+ ....
T Consensus 146 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~---------~~~~~~~~~~-~~~~~~~~~~~~~~~~ 215 (255)
T 2q2v_A 146 TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLV---------QKQIDDRAAN-GGDPLQAQHDLLAEKQ 215 (255)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHH---------HHHHHHHHHH-TCCHHHHHHHHHTTTC
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcch---------hhhccccccc-ccchHHHHHHHHhccC
Confidence 23468999999999999999876 369999999999987631 11110 000 0000 0000 1222
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+...+++++|+|++++.++..+ .+..+++.++..
T Consensus 216 p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~ 253 (255)
T 2q2v_A 216 PSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWL 253 (255)
T ss_dssp TTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred CCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCcc
Confidence 3456899999999999988653 367888887644
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-21 Score=173.84 Aligned_cols=227 Identities=18% Similarity=0.124 Sum_probs=156.5
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc--------cccccceeEEecccchhhHhhhcc----
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT--------EDMFCHEFHLVDLRVMDNCLKVTK---- 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~~i~~~~~dl~~~~~~~~~~~---- 89 (374)
+.+++|++|||||+|+||+++++.|+++|++|++++|+...... .....+.++.+|++|.+.+..+++
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 100 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD 100 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 34566899999999999999999999999999999985432111 012356788899999998887765
Q ss_pred ---CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCC
Q 017290 90 ---GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 ---~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|++||+|+....... ...+.+..+++|+.++..+++++ ++.+..++|++||...+.
T Consensus 101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------ 168 (281)
T 3v2h_A 101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLV------------ 168 (281)
T ss_dssp HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------------
T ss_pred HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCccccc------------
Confidence 78999999997543222 22234557889999999998876 445556999999987653
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHH-HHhccCCc-eEeeC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCR-KALTSTDK-FEMWG 234 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~ 234 (374)
+......|+.+|...+.+++.++.+. ++++.+++||.+.++.... ....... ......+. ...+.
T Consensus 169 -----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 238 (281)
T 3v2h_A 169 -----ASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEK-----QIPDQARTRGITEEQVINEVML 238 (281)
T ss_dssp -----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--------------------------------
T ss_pred -----CCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhh-----hcchhhhhcCCCHHHHHHHHHH
Confidence 22234689999999999999988663 7999999999999874221 1100000 00000000 01223
Q ss_pred CCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.+.+...+++++|+|++++.++... .+.++++.+|.
T Consensus 239 ~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 239 KGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp -CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred hcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence 4455678999999999999988654 37888988764
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=6.9e-22 Score=178.78 Aligned_cols=240 Identities=12% Similarity=0.023 Sum_probs=165.0
Q ss_pred CCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc------cc---cceeEEecccchhhHhhhcc--
Q 017290 21 YWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED------MF---CHEFHLVDLRVMDNCLKVTK-- 89 (374)
Q Consensus 21 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~---~i~~~~~dl~~~~~~~~~~~-- 89 (374)
.|...+|++|||||+|+||+++++.|+++|++|++++|+........ .. .+.++.+|+++.+.+..+++
T Consensus 21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 100 (297)
T 1xhl_A 21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT 100 (297)
T ss_dssp --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence 34456789999999999999999999999999999999864322110 11 46788999999998887765
Q ss_pred -----CCCEEEEcccccCCcc-----cccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccc
Q 017290 90 -----GVDHVFNLAADMGGMG-----FIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETN 155 (374)
Q Consensus 90 -----~~d~vi~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~ 155 (374)
++|+|||+|+...... ....+.+..+++|+.++..+++++.. .+ .++|++||...+...
T Consensus 101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~------ 173 (297)
T 1xhl_A 101 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA------ 173 (297)
T ss_dssp HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC------
T ss_pred HHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC------
Confidence 7999999999653211 12223455788999999888887653 44 699999998765321
Q ss_pred cCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHH-HHHHHhccCCceE
Q 017290 156 VSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAA-FCRKALTSTDKFE 231 (374)
Q Consensus 156 ~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 231 (374)
..+...|+.+|...+.+.+.++.+ .++++++++||.+.++..... ....... -.......
T Consensus 174 ----------~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~----- 237 (297)
T 1xhl_A 174 ----------HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAM-GLPETASDKLYSFIGS----- 237 (297)
T ss_dssp ----------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHT-TCCHHHHHHHHHHHHH-----
T ss_pred ----------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccc-ccccccccchHHHHHH-----
Confidence 023468999999999999988754 589999999999987631100 0000000 00000100
Q ss_pred eeCCCcccccceeHHHHHHHHHhhhccC-----CCCcEEecCCCccCHHHHHHHHHHh
Q 017290 232 MWGDGLQTRSFTFIDECVEGVLRLTKSD-----FREPVNIGSDEMVSMNEMAEIVLSF 284 (374)
Q Consensus 232 ~~~~~~~~~~~i~~~Dva~~i~~~~~~~-----~~~~~~i~~~~~~s~~e~~~~i~~~ 284 (374)
+ ....+...+...+|+|++++.++..+ .+..+++.++..+.+.+.+..+.++
T Consensus 238 ~-~~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~ 294 (297)
T 1xhl_A 238 R-KECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSV 294 (297)
T ss_dssp C-TTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred H-HhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhh
Confidence 0 01112335789999999999988643 4788999988777766665555544
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=174.39 Aligned_cols=219 Identities=16% Similarity=0.093 Sum_probs=158.2
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhcc-------CC
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
|.+.+|+||||||+|+||+++++.|+++|++|++++|+........ ...+.++.+|+++.+.+.++++ ++
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 87 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRV 87 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence 4456789999999999999999999999999999999876432211 1246888999999998888776 89
Q ss_pred CEEEEcccccCCcc---------cccCCcceehhhhHHHHHHHHHHHHhC----------CCCeEEEeecccccCCCccc
Q 017290 92 DHVFNLAADMGGMG---------FIQSNHSVIMYNNTMISFNMLEASRIS----------GVKRFFYASSACIYPEFKQL 152 (374)
Q Consensus 92 d~vi~~a~~~~~~~---------~~~~~~~~~~~~n~~~~~~ll~a~~~~----------~~~~~i~~Ss~~vy~~~~~~ 152 (374)
|+|||+|+...... ....+.+..+++|+.++.++++++... +..++|++||...+..
T Consensus 88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---- 163 (265)
T 2o23_A 88 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG---- 163 (265)
T ss_dssp CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC----
T ss_pred CEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC----
Confidence 99999999753211 112234557889999999999887653 5568999999876532
Q ss_pred ccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCc
Q 017290 153 ETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDK 229 (374)
Q Consensus 153 ~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (374)
..+...|+.+|...+.+++.++.+ .++++++++||.+.++.... ........ +...
T Consensus 164 -------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----~~~~~~~~-~~~~-- 222 (265)
T 2o23_A 164 -------------QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-----LPEKVCNF-LASQ-- 222 (265)
T ss_dssp -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------CH-HHHT--
T ss_pred -------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc-----cCHHHHHH-HHHc--
Confidence 224568999999999999888765 47999999999998764210 00000000 0000
Q ss_pred eEeeCCCccc-ccceeHHHHHHHHHhhhccC--CCCcEEecCCCcc
Q 017290 230 FEMWGDGLQT-RSFTFIDECVEGVLRLTKSD--FREPVNIGSDEMV 272 (374)
Q Consensus 230 ~~~~~~~~~~-~~~i~~~Dva~~i~~~~~~~--~~~~~~i~~~~~~ 272 (374)
... ..+++.+|+|++++.+++.+ .++.+++.++..+
T Consensus 223 -------~~~~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdgG~~~ 261 (265)
T 2o23_A 223 -------VPFPSRLGDPAEYAHLVQAIIENPFLNGEVIRLDGAIRM 261 (265)
T ss_dssp -------CSSSCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred -------CCCcCCCCCHHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence 011 34789999999999998765 4778888877544
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-21 Score=172.49 Aligned_cols=221 Identities=15% Similarity=0.057 Sum_probs=155.2
Q ss_pred CCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-cccccceeEEecccchhhHhhhcc-------C
Q 017290 19 EPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-EDMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 19 ~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
...|...+|++|||||+|+||+++++.|+++|++|++++|+...... ....++.++.+|+++.+.+.++++ +
T Consensus 20 ~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (260)
T 3gem_A 20 QGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSS 99 (260)
T ss_dssp -------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSC
T ss_pred ccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 44455677899999999999999999999999999999998764221 122357889999999988877764 7
Q ss_pred CCEEEEcccccCCcc--cccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 91 VDHVFNLAADMGGMG--FIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~--~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
+|++||+|+...... ....+.+..+++|+.++..+++++. +.+..++|++||...+.
T Consensus 100 iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------------- 162 (260)
T 3gem_A 100 LRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRK----------------- 162 (260)
T ss_dssp CSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGT-----------------
T ss_pred CCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC-----------------
Confidence 899999999754221 1112234578899999999888764 34556999999987653
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhhC--CcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDFG--IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (374)
+..+...|+.+|...+.+++.++.+.+ +++.+++||.+..+... ...+..... .......+
T Consensus 163 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~-------~~~~~~~~~----------~~~p~~r~ 225 (260)
T 3gem_A 163 GSSKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKD-------DAAYRANAL----------AKSALGIE 225 (260)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--------------------------------CCSCCC
T ss_pred CCCCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCC-------CHHHHHHHH----------hcCCCCCC
Confidence 223456899999999999999987653 99999999999866321 011111111 11122346
Q ss_pred eeHHHHHHHHHhhhccC--CCCcEEecCCCccC
Q 017290 243 TFIDECVEGVLRLTKSD--FREPVNIGSDEMVS 273 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~--~~~~~~i~~~~~~s 273 (374)
...+|+|++++.+++.. .+.++++.+|..++
T Consensus 226 ~~~edva~~v~~L~~~~~itG~~i~vdGG~~~~ 258 (260)
T 3gem_A 226 PGAEVIYQSLRYLLDSTYVTGTTLTVNGGRHVK 258 (260)
T ss_dssp CCTHHHHHHHHHHHHCSSCCSCEEEESTTTTTC
T ss_pred CCHHHHHHHHHHHhhCCCCCCCEEEECCCcccC
Confidence 67899999999988655 47889999887665
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-21 Score=174.23 Aligned_cols=228 Identities=17% Similarity=0.088 Sum_probs=160.8
Q ss_pred CCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc------
Q 017290 19 EPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 19 ~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+..|...+|++|||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++
T Consensus 20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKW 99 (277)
T ss_dssp --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 344556778999999999999999999999999999999986532211 12246788999999988887775
Q ss_pred -CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 -GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|++||+|+....... ...+.+..+++|+.++..+++++. +.+..++|++||...+.
T Consensus 100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------- 165 (277)
T 4dqx_A 100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATS-------------- 165 (277)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTS--------------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCc--------------
Confidence 79999999997542212 222345567899999988888774 34445999999987653
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCC-CCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTW-KGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+..+...|+.+|...+.+++.++.+. ++++.+++||.+..+.... ............. +....
T Consensus 166 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~----------~~~~~ 232 (277)
T 4dqx_A 166 ---AIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSD----------FNARA 232 (277)
T ss_dssp ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHH----------HHTTS
T ss_pred ---CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHH----------HHhcC
Confidence 22345689999999999999987664 7999999999998652000 0000000111000 11223
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
....+.+.+|+|++++.++... .+..+++.+|..++
T Consensus 233 ~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 233 VMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSIG 272 (277)
T ss_dssp TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred cccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence 3446789999999999988654 37889998876654
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.87 E-value=7e-22 Score=174.98 Aligned_cols=222 Identities=15% Similarity=0.065 Sum_probs=162.5
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+...++++|||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 445779999999999999999999999999999999986532211 12356788999999988877765
Q ss_pred -CCCEEEEcccccCCcc--cccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 -GVDHVFNLAADMGGMG--FIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~--~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|++||+|+...... ....+.+..+++|+.++..+++++. +.+..++|++||...+.
T Consensus 88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--------------- 152 (256)
T 3gaf_A 88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN--------------- 152 (256)
T ss_dssp SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC---------------
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC---------------
Confidence 7999999999754321 2223345678899999999988863 44556999999987653
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+..+...|+.+|...+.+.+.++.+ .++++.+++||.+..+... ............ ...+.
T Consensus 153 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~----~~~~~~~~~~~~----------~~~p~ 216 (256)
T 3gaf_A 153 --TNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALA----TVLTPEIERAML----------KHTPL 216 (256)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH----HHCCHHHHHHHH----------TTCTT
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhh----hccCHHHHHHHH----------hcCCC
Confidence 2234578999999999999998876 4799999999999875210 000011111111 12234
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCCCccCH
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSM 274 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s~ 274 (374)
..+.+.+|+|++++.++... .+.++++.+|...++
T Consensus 217 ~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 217 GRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQEL 255 (256)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred CCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCccccC
Confidence 46789999999999988653 478899998877654
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=173.12 Aligned_cols=212 Identities=14% Similarity=0.074 Sum_probs=156.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
..+|++|||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++ ++|+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~ 84 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 84 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3568999999999999999999999999999999986432211 11236788999999998888876 8999
Q ss_pred EEEcccccCCcc---cccCCcceehhhhHHHHHHHHHH----HHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 94 VFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEA----SRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 94 vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a----~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
|||+|+...... ....+.+..+++|+.++..++++ +++.+..++|++||...+.. .
T Consensus 85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~ 147 (260)
T 1nff_A 85 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG-----------------T 147 (260)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------------C
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCC-----------------C
Confidence 999999754211 12223455788999998665554 44556679999999877532 1
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
.+...|+.+|...+.+++.++.+ .+++++++|||.++++.... . ...+. ......+.
T Consensus 148 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------------~-~~~~~----~~~~~~~~ 207 (260)
T 1nff_A 148 VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW---------------V-PEDIF----QTALGRAA 207 (260)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT---------------S-CTTCS----CCSSSSCB
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcccc---------------c-hhhHH----hCccCCCC
Confidence 23468999999999999998766 58999999999999874210 0 00010 11223578
Q ss_pred eHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 244 FIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
+.+|+|++++.++..+ .+..+++.++...
T Consensus 208 ~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~~ 240 (260)
T 1nff_A 208 EPVEVSNLVVYLASDESSYSTGAEFVVDGGTVA 240 (260)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence 9999999999988653 3678999887543
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=174.38 Aligned_cols=219 Identities=12% Similarity=0.082 Sum_probs=158.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
++++++||||+|+||++++++|+++|++|++++|+...... .....+.++.+|++|.+.+.++++ +
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 85 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK 85 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 56889999999999999999999999999999887643211 112357889999999998887775 8
Q ss_pred CCEEEEccccc--CCcc---cccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 91 VDHVFNLAADM--GGMG---FIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 91 ~d~vi~~a~~~--~~~~---~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
+|+|||+|+.. .... ....+.+..+++|+.++..+++++ ++.+..++|++||...++..
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~------------ 153 (264)
T 3i4f_A 86 IDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAP------------ 153 (264)
T ss_dssp CCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCC------------
T ss_pred CCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccC------------
Confidence 99999999942 2111 122234567889999999999887 55666699999997554221
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
+..+...|+.+|...+.+++.++.+ .++++.+++||.++++... ......... . ....+
T Consensus 154 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-----~~~~~~~~~-~---------~~~~p 215 (264)
T 3i4f_A 154 ---GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKE-----ATIQEARQL-K---------EHNTP 215 (264)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGS-----CCHHHHHHC----------------
T ss_pred ---CCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccch-----hccHHHHHH-H---------hhcCC
Confidence 2234578999999999999988876 5799999999999987532 222222111 1 11122
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
...+.+.+|+|++++.++... .+.++++.+|....
T Consensus 216 ~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~~ 254 (264)
T 3i4f_A 216 IGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDVI 254 (264)
T ss_dssp --CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCCC
T ss_pred CCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceeec
Confidence 345789999999999998754 37889998876543
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.5e-22 Score=175.00 Aligned_cols=213 Identities=15% Similarity=0.093 Sum_probs=150.1
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEE-eCCCCccccc------cccccee-EEecccchhhHhhhcc-------C
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIAS-DWKKNEHMTE------DMFCHEF-HLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~------~~~~i~~-~~~dl~~~~~~~~~~~-------~ 90 (374)
||+||||||+|+||++++++|+++|++|+++ +|++...... ....+.. +.+|+++.+.+.++++ +
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999999998 7765432111 0113455 8899999988877754 7
Q ss_pred CCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHH----HHHHhCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 91 VDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNML----EASRISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll----~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+|+|||+|+...... ....+.+..+++|+.++..++ ..+++.+.+++|++||...+..
T Consensus 81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------- 145 (245)
T 2ph3_A 81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILG--------------- 145 (245)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC---------------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccC---------------
Confidence 999999999754211 122234567889999955554 4555567779999999755321
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
..+...|+.+|...+.+++.++.+. +++++++||+.++++... .....+...... . ....
T Consensus 146 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~~~~~~~-~---------~~~~ 208 (245)
T 2ph3_A 146 --NPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTE-----RLPQEVKEAYLK-Q---------IPAG 208 (245)
T ss_dssp --CSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-----TSCHHHHHHHHH-T---------CTTC
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchh-----hcCHHHHHHHHh-c---------CCCC
Confidence 1234689999999999999887664 799999999999876321 111122222111 1 1123
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.+++++|+|++++.++..+ .++.|+++++.
T Consensus 209 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 209 RFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred CCcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence 5789999999999998753 37788888754
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.5e-21 Score=170.09 Aligned_cols=219 Identities=18% Similarity=0.134 Sum_probs=157.2
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEEE
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHVF 95 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi 95 (374)
...+|++|||||+|+||+++++.|+++|++|++++|+....... ..+.+|+++.+.+..+++ ++|++|
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lv 99 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD-----LHLPGDLREAAYADGLPGAVAAGLGRLDIVV 99 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCS-----EECCCCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhh-----hccCcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 34678999999999999999999999999999999986643322 334789999887766653 799999
Q ss_pred EcccccCCcccc---cCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 96 NLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 96 ~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
|+|+........ ..+.+..+++|+.++..+++++ ++.+..++|++||...+. +..+
T Consensus 100 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------------~~~~ 162 (266)
T 3uxy_A 100 NNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR-----------------PGPG 162 (266)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB-----------------CCTT
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------------CCCC
Confidence 999976432222 2234556789999999999887 455556999999987653 2234
Q ss_pred CCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCC--CCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 169 QDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKG--MEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
...|+.+|...+.+++.++.+. ++++.+++||.+.++...... ........... +....+...+.
T Consensus 163 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----------~~~~~p~~r~~ 232 (266)
T 3uxy_A 163 HALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAE----------LGRTVPLGRIA 232 (266)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHH----------HHTTSTTSSCB
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHH----------HHhcCCCCCCc
Confidence 5689999999999999988764 799999999999875210000 00000011111 11223345688
Q ss_pred eHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 244 FIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
+.+|+|++++.++... .+..+++.+|..++
T Consensus 233 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~s 266 (266)
T 3uxy_A 233 EPEDIADVVLFLASDAARYLCGSLVEVNGGKAVA 266 (266)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred CHHHHHHHHHHHhCchhcCCcCCEEEECcCEeCC
Confidence 9999999999988764 37889998876653
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.3e-21 Score=173.07 Aligned_cols=219 Identities=13% Similarity=0.034 Sum_probs=160.0
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-------cccceeEEecccchhhHhhhcc------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-------MFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
...+|++|||||+|+||+++++.|+++|++|++++|+........ ...+.++.+|++|.+.+.++++
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 346789999999999999999999999999999999875432211 1356788999999988777654
Q ss_pred -CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 -GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|++||+|+....... ...+.+..+++|+.++.++++++ ++.+..++|++||...+..
T Consensus 118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~------------- 184 (293)
T 3rih_A 118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVT------------- 184 (293)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTB-------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccC-------------
Confidence 78999999997643222 22334567899999999999887 3556679999999764210
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
+......|+.+|...+.+.+.++.+ .++++.+++||.++++... .....+...... . ..
T Consensus 185 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~-----~~~~~~~~~~~~-~---------~p 246 (293)
T 3rih_A 185 ---GYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLV-----DMGEEYISGMAR-S---------IP 246 (293)
T ss_dssp ---BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH-----HTCHHHHHHHHT-T---------ST
T ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchh-----hccHHHHHHHHh-c---------CC
Confidence 1224568999999999999988866 4799999999999986311 111222222221 1 12
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
...+...+|+|++++.++... .+.++++.+|..+
T Consensus 247 ~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~ 284 (293)
T 3rih_A 247 MGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVL 284 (293)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 234678999999999988653 3788999887654
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.87 E-value=8.4e-22 Score=173.95 Aligned_cols=217 Identities=14% Similarity=0.019 Sum_probs=154.4
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc-------CC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
+.+|+||||||+|+||+++++.|+++|++|++++|++...... ....+.++.+|+++.+.+.++++ ++
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4568999999999999999999999999999999986432111 01357889999999988887765 59
Q ss_pred CEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHH----HHhCCC-CeEEEeecccccCCCcccccccCCCCCCC
Q 017290 92 DHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEA----SRISGV-KRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 92 d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a----~~~~~~-~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
|+|||+|+....... ...+.+..+++|+.++..+.++ +++.+. .++|++||...+..
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--------------- 148 (251)
T 1zk4_A 84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG--------------- 148 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC---------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccC---------------
Confidence 999999997532111 1223355788999877666554 445565 69999999877542
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHh-----hhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTK-----DFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~-----~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
..+...|+.+|...|.+++.++. ..+++++++||+.++++.... .......... .....
T Consensus 149 --~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~-----~~~~~~~~~~---------~~~~~ 212 (251)
T 1zk4_A 149 --DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD-----LPGAEEAMSQ---------RTKTP 212 (251)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT-----STTHHHHHTS---------TTTCT
T ss_pred --CCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh-----cCchhhhHHH---------hhcCC
Confidence 22456899999999999988765 347999999999999864211 0001111101 11112
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
...+++.+|+|++++.++..+ .+..+++.++..
T Consensus 213 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 249 (251)
T 1zk4_A 213 MGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT 249 (251)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCcCHHHHHHHHHHHcCcccccccCcEEEECCCcc
Confidence 345889999999999988653 367889887754
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=5.2e-22 Score=175.96 Aligned_cols=215 Identities=14% Similarity=0.118 Sum_probs=155.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCC-CCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWK-KNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
.+|+||||||+|+||++++++|+++|++|++++|+ +...... ...++.++.+|+++.+.+.++++ +
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG 85 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56899999999999999999999999999999998 4432211 12256789999999998888876 8
Q ss_pred CCEEEEcccc-cCCcccc---cCCcceehhhhHHHHHHHHHHHHh----CC--C---CeEEEeecccccCCCcccccccC
Q 017290 91 VDHVFNLAAD-MGGMGFI---QSNHSVIMYNNTMISFNMLEASRI----SG--V---KRFFYASSACIYPEFKQLETNVS 157 (374)
Q Consensus 91 ~d~vi~~a~~-~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~~----~~--~---~~~i~~Ss~~vy~~~~~~~~~~~ 157 (374)
+|+|||+|+. ....... ..+.+..+++|+.++..+++++.. .+ . .++|++||...+..
T Consensus 86 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------- 156 (258)
T 3afn_B 86 IDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG--------- 156 (258)
T ss_dssp CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC---------
T ss_pred CCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC---------
Confidence 9999999996 3211111 122455678999999888876532 22 1 58999999766531
Q ss_pred CCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeC
Q 017290 158 LKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWG 234 (374)
Q Consensus 158 ~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (374)
+..+...|+.+|...|.+++.++.+. +++++++||+.++++.... ....+...... +
T Consensus 157 -------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~-----~~~~~~~~~~~-~------- 216 (258)
T 3afn_B 157 -------GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD-----KTQDVRDRISN-G------- 216 (258)
T ss_dssp -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT-----CCHHHHHHHHT-T-------
T ss_pred -------CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc-----cCHHHHHHHhc-c-------
Confidence 11245689999999999999987664 8999999999999875321 11222222221 1
Q ss_pred CCcccccceeHHHHHHHHHhhhccC-----CCCcEEecCCC
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSD-----FREPVNIGSDE 270 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~-----~~~~~~i~~~~ 270 (374)
.+...+++++|+|++++.++..+ .++.|+++++.
T Consensus 217 --~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 217 --IPMGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp --CTTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred --CCCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence 12346889999999999988653 36789998764
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-21 Score=171.28 Aligned_cols=226 Identities=10% Similarity=0.003 Sum_probs=154.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc----c----cccceeEEecccchhhHhhhcc------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE----D----MFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~----~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
..++++|||||+|+||+++++.|+++|++|++++|++...... . ..++.++.+|++|.+.+..+++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG 84 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 4568999999999999999999999999999999986432211 0 1146788999999998888775
Q ss_pred CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|+|||+|+....... ...+.+..+++|+.++..+++++ ++.+..++|++||...+..
T Consensus 85 gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------- 150 (260)
T 2z1n_A 85 GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRP-------------- 150 (260)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCC--------------
Confidence 69999999996532111 22234567889999986666554 4556679999999877642
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
..+...|+.+|...+.+.+.++.+. ++++.+++||.++++..... ..................+....+.
T Consensus 151 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~ 223 (260)
T 2z1n_A 151 ---WQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSL----AEERARRSGITVEEALKSMASRIPM 223 (260)
T ss_dssp ---CTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC---------------------------CCTT
T ss_pred ---CCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhh----hhhhhcccCCcHHHHHHHHHhcCCC
Confidence 2234689999999999999887664 79999999999998753200 0000000000000000000111123
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
..+.+.+|+|++++.++..+ .+..+++.++.
T Consensus 224 ~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~ 258 (260)
T 2z1n_A 224 GRVGKPEELASVVAFLASEKASFITGAVIPVDGGA 258 (260)
T ss_dssp SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred CCccCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 45789999999999998753 36778887663
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-21 Score=170.87 Aligned_cols=219 Identities=14% Similarity=0.087 Sum_probs=154.9
Q ss_pred CCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc---CCCEE
Q 017290 21 YWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK---GVDHV 94 (374)
Q Consensus 21 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~---~~d~v 94 (374)
.....+++||||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|+.+.+.+.++++ ++|++
T Consensus 9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~l 88 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDIL 88 (249)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEE
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence 3445779999999999999999999999999999999986542221 11256788899999998888876 78999
Q ss_pred EEcccccCCc---ccccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 95 FNLAADMGGM---GFIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 95 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
||+|+..... .....+.+..+++|+.++..+++++. +.+..++|++||...+.. ..
T Consensus 89 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~ 151 (249)
T 3f9i_A 89 VCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAG-----------------NP 151 (249)
T ss_dssp EECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--C-----------------CS
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccC-----------------CC
Confidence 9999975421 12334556778999999998887763 344559999999876532 23
Q ss_pred CCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccccee
Q 017290 168 PQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
+...|+.+|...+.+++.++.+ .++++.+++||.+.++... ............ ..+...+.+
T Consensus 152 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-----~~~~~~~~~~~~----------~~~~~~~~~ 216 (249)
T 3f9i_A 152 GQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTD-----KLNEKQREAIVQ----------KIPLGTYGI 216 (249)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC-----------CCHHHHHHHHH----------HCTTCSCBC
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccc-----ccCHHHHHHHHh----------cCCCCCCcC
Confidence 4568999999999999988765 4799999999999877432 111222222111 112346789
Q ss_pred HHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 245 IDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
.+|+|++++.++..+ .++.+++++|..
T Consensus 217 ~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 217 PEDVAYAVAFLASNNASYITGQTLHVNGGML 247 (249)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred HHHHHHHHHHHcCCccCCccCcEEEECCCEe
Confidence 999999999998754 378899987754
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=9.2e-22 Score=174.78 Aligned_cols=215 Identities=13% Similarity=0.014 Sum_probs=154.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeC-CCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDW-KKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
.+|+||||||+|+||++++++|+++|++|++++| +....... ....+.++.+|+++.+.+.++++ +
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5689999999999999999999999999999999 43321110 11246788999999988887765 7
Q ss_pred CCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccccCCCcccccccCCCCCC
Q 017290 91 VDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
+|+|||+|+....... ...+.+..+++|+.++.++++++.. .+ ..++|++||...+.
T Consensus 86 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~--------------- 150 (261)
T 1gee_A 86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI--------------- 150 (261)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS---------------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC---------------
Confidence 9999999997542111 2223455788999998888776543 34 56999999976542
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcH--HHHHHHHhccCCceEeeCCCc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAP--AAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+..+...|+.+|...+.+++.++.+. +++++++||+.++++... ... ..+...... ..
T Consensus 151 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~~~~~~~~~----------~~ 213 (261)
T 1gee_A 151 --PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA-----EKFADPEQRADVES----------MI 213 (261)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH-----HHHHSHHHHHHHHT----------TC
T ss_pred --CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhh-----hcccChhHHHHHHh----------cC
Confidence 22355789999999999998887654 899999999999987421 000 111111111 11
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
....+++.+|+|++++.++... .+..+++.++..
T Consensus 214 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~ 251 (261)
T 1gee_A 214 PMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCcc
Confidence 1235789999999999988653 367888887754
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-21 Score=173.86 Aligned_cols=218 Identities=16% Similarity=0.069 Sum_probs=154.9
Q ss_pred CCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-----
Q 017290 21 YWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 21 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
.+.+++++||||||+|+||+++++.|+++|++|++++|++...... ....+.++.+|++|.+.+.++++
T Consensus 39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE 118 (285)
T ss_dssp CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence 3445678999999999999999999999999999988875432111 12246788999999998887763
Q ss_pred --CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 --GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|+|||+|+...... ....+.+..+++|+.++.++++++. +.+..++|++||...+..
T Consensus 119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------ 186 (285)
T 2c07_A 119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG------------ 186 (285)
T ss_dssp CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC------------
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC------------
Confidence 7899999999754211 1223345678899999877777664 456679999999865421
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
..+...|+.+|...+.+++.++.+. +++++++|||.+.++... .....+...... . .
T Consensus 187 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~~~~~~~-~---------~ 246 (285)
T 2c07_A 187 -----NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD-----KISEQIKKNIIS-N---------I 246 (285)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------CCHHHHHHHHT-T---------C
T ss_pred -----CCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchh-----hcCHHHHHHHHh-h---------C
Confidence 1234689999999999999887653 799999999999887421 111222222211 1 1
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
....+++.+|+|++++.++..+ .+..+++.++.
T Consensus 247 ~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~ 283 (285)
T 2c07_A 247 PAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGL 283 (285)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence 1234789999999999988753 36788888764
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=6.2e-22 Score=177.86 Aligned_cols=230 Identities=18% Similarity=0.058 Sum_probs=160.7
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc------------------ccccccceeEEecccchhhH
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM------------------TEDMFCHEFHLVDLRVMDNC 84 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------------~~~~~~i~~~~~dl~~~~~~ 84 (374)
...+|++|||||+|+||+++++.|+++|++|++++|++.... ......+.++.+|++|.+.+
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL 86 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 346789999999999999999999999999999999743210 00112467889999999988
Q ss_pred hhhcc-------CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCc
Q 017290 85 LKVTK-------GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFK 150 (374)
Q Consensus 85 ~~~~~-------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~ 150 (374)
.++++ ++|++||+|+...... ....+.+..+++|+.++.++++++ ++.+..++|++||...+.
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--- 163 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS--- 163 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS---
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC---
Confidence 87775 7999999999754221 222334567889999999998875 344556999999987653
Q ss_pred ccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccC
Q 017290 151 QLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTST 227 (374)
Q Consensus 151 ~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~ 227 (374)
+..+...|+.+|...+.+.+.++.+ .++++.+++||.++++.... ......+.......
T Consensus 164 --------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~----~~~~~~~~~~~~~~ 225 (281)
T 3s55_A 164 --------------ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHN----DFVFGTMRPDLEKP 225 (281)
T ss_dssp --------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSS----HHHHHC-------C
T ss_pred --------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccc----hhhhcccccccccc
Confidence 2234568999999999999999875 47999999999999885321 00000000000000
Q ss_pred Cc----eEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 228 DK----FEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 228 ~~----~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
.. ..+........++.+.+|+|++++.++... .+.++++.+|...+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 226 TLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR 279 (281)
T ss_dssp CHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred chhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence 00 000001112256899999999999998764 37889999886554
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.7e-21 Score=174.42 Aligned_cols=218 Identities=14% Similarity=0.110 Sum_probs=160.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
..+|++|||||+|+||+++++.|+++|++|++++|+...... .....+.++.+|++|.+.+.++++
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 124 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG 124 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 466899999999999999999999999999999998653111 112356788999999988877765
Q ss_pred CCCEEEEcccccCCcc----cccCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 90 GVDHVFNLAADMGGMG----FIQSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
++|++||+|+...... ....+.+..+++|+.++..+++++...- ..++|++||...+..
T Consensus 125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~--------------- 189 (291)
T 3ijr_A 125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEG--------------- 189 (291)
T ss_dssp SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHC---------------
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCC---------------
Confidence 7899999999653211 1223456678999999999999987653 348999999877632
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
......|+.+|...+.+++.++.+. ++++.+++||.++++... ......... .+....+..
T Consensus 190 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~----~~~~~~~~~----------~~~~~~p~~ 253 (291)
T 3ijr_A 190 --NETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIP----SSFDEKKVS----------QFGSNVPMQ 253 (291)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHH----HHSCHHHHH----------HTTTTSTTS
T ss_pred --CCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCccc----ccCCHHHHH----------HHHccCCCC
Confidence 2234689999999999999988764 799999999999976310 000001111 112233445
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
.+.+.+|+|++++.++... .+.++++.+|..+
T Consensus 254 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 289 (291)
T 3ijr_A 254 RPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVIV 289 (291)
T ss_dssp SCBCGGGTHHHHHHHHSGGGTTCCSCEEEESSSCCC
T ss_pred CCcCHHHHHHHHHHHhCCccCCCcCCEEEECCCccc
Confidence 6889999999999988653 3778898877554
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.7e-21 Score=169.56 Aligned_cols=208 Identities=11% Similarity=-0.049 Sum_probs=146.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhcc---------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTK---------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~---------~ 90 (374)
++++||||||+|+||+++++.|+++| ++|++++|+........ ..++.++.+|+++.+.+.++++ +
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~ 81 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence 46899999999999999999999999 99999999865432211 2357889999999988887776 8
Q ss_pred CCEEEEcccccC-Ccc---cccCCcceehhhhHHHHHHHHHHHHhC----------C-----CCeEEEeecccccCCCcc
Q 017290 91 VDHVFNLAADMG-GMG---FIQSNHSVIMYNNTMISFNMLEASRIS----------G-----VKRFFYASSACIYPEFKQ 151 (374)
Q Consensus 91 ~d~vi~~a~~~~-~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~~----------~-----~~~~i~~Ss~~vy~~~~~ 151 (374)
+|+|||+|+... ... ....+.+..+++|+.++.++++++... + ..++|++||...+.....
T Consensus 82 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~ 161 (250)
T 1yo6_A 82 LSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT 161 (250)
T ss_dssp CCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC
T ss_pred CcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcc
Confidence 999999999754 111 112234557889999999888876432 4 569999999877543210
Q ss_pred cccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCC
Q 017290 152 LETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTD 228 (374)
Q Consensus 152 ~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~ 228 (374)
... +..+...|+.+|...+.+++.++.+. ++++.+++||.+..+... .
T Consensus 162 --------~~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~------------------~- 212 (250)
T 1yo6_A 162 --------SGS--AQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG------------------K- 212 (250)
T ss_dssp --------STT--SSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------
T ss_pred --------ccc--ccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCC------------------C-
Confidence 111 22455789999999999999988764 799999999998765210 0
Q ss_pred ceEeeCCCcccccceeHHHHHHHHHhhhccCC---CCcEEecCCCcc
Q 017290 229 KFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF---REPVNIGSDEMV 272 (374)
Q Consensus 229 ~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~---~~~~~i~~~~~~ 272 (374)
..+++.+|+|+.++.++.... .+.|...++..+
T Consensus 213 -----------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~ 248 (250)
T 1yo6_A 213 -----------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPY 248 (250)
T ss_dssp -----------------HHHHHHHHHHHTTCCGGGTTCEEETTEEEC
T ss_pred -----------CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCcCC
Confidence 135789999999999998753 444544434433
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.5e-21 Score=169.59 Aligned_cols=215 Identities=16% Similarity=0.095 Sum_probs=153.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
.+|++|||||+|+||+++++.|+++|++|++++|+........ ...+.++.+|+++.+.+.++++ ++|++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5689999999999999999999999999999999864322110 1246788899999998887775 79999
Q ss_pred EEcccccCCccc---ccCCcceehhhhHHHHHHH----HHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 95 FNLAADMGGMGF---IQSNHSVIMYNNTMISFNM----LEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 95 i~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l----l~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
||+|+....... ...+.+..+++|+.++..+ +..+++.+..++|++||...+.. ..
T Consensus 84 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~ 146 (254)
T 1hdc_A 84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG-----------------LA 146 (254)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------------CT
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC-----------------CC
Confidence 999997542111 2223455788999888754 44555566679999999876532 22
Q ss_pred CCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccce-
Q 017290 168 PQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT- 243 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i- 243 (374)
+...|+.+|...+.+.+.++.+ .+++++++|||.++++.. ... . ......+....+...+.
T Consensus 147 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-------------~~~-~-~~~~~~~~~~~p~~~~~~ 211 (254)
T 1hdc_A 147 LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT-------------AET-G-IRQGEGNYPNTPMGRVGN 211 (254)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-------------HHH-T-CCCSTTSCTTSTTSSCB-
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccc-------------ccc-c-hhHHHHHHhcCCCCCCCC
Confidence 4468999999999999998765 479999999999987521 111 1 00000001111223467
Q ss_pred eHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 244 FIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+.+|+|++++.++..+ .+..+++.++..
T Consensus 212 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 212 EPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CHHHHHHHHHHHhCchhcCCCCCEEEECCCcc
Confidence 9999999999988753 367888887654
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-21 Score=173.71 Aligned_cols=225 Identities=13% Similarity=0.018 Sum_probs=159.4
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc-----
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
+.+.+|+||||||+|+||++++++|+++|++|++++|+....... ....+.++.+|++|.+.+..+++
T Consensus 10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 89 (265)
T 1h5q_A 10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD 89 (265)
T ss_dssp ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence 345668999999999999999999999999999999975432111 02246788999999988877664
Q ss_pred --CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhC----C-CCeEEEeecccccCCCcccccccCCC
Q 017290 90 --GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRIS----G-VKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~----~-~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|+|||+|+....... ...+.+..+++|+.++.++++++... + ..+||++||...+.....
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------- 161 (265)
T 1h5q_A 90 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS-------- 161 (265)
T ss_dssp SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE--------
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc--------
Confidence 58999999997542211 12234456889999999998887542 3 358999999877543211
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
... +..+...|+.+|...|.+++.++.+ .+++++++||+.++++... ............ .
T Consensus 162 ~~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~~~~~~~-~--------- 224 (265)
T 1h5q_A 162 SLN--GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA-----HMDKKIRDHQAS-N--------- 224 (265)
T ss_dssp ETT--EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG-----GSCHHHHHHHHH-T---------
T ss_pred ccc--ccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccc-----ccchhHHHHHHh-c---------
Confidence 001 2345678999999999999998865 3799999999999987422 111122111111 1
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
.....+++.+|+|++++.++..+ .++.|++.++..
T Consensus 225 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 263 (265)
T 1h5q_A 225 IPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL 263 (265)
T ss_dssp CTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred CcccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCCEe
Confidence 11234789999999999988653 477899987754
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=7.9e-22 Score=174.39 Aligned_cols=218 Identities=20% Similarity=0.170 Sum_probs=134.0
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
|..+++++|||||+|+||++++++|+++|++|++++|+....... ....+.++.+|++|.+.+.++++
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 455779999999999999999999999999999999986532211 12346788999999998887775
Q ss_pred -CCCEEEEcccccCCc------ccccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCC
Q 017290 90 -GVDHVFNLAADMGGM------GFIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~------~~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
++|+|||+|+..... .....+.+..+++|+.++..+++++ ++.+..++|++||...|.
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 153 (253)
T 3qiv_A 85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL----------- 153 (253)
T ss_dssp SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----------------
T ss_pred CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC-----------
Confidence 899999999974211 1122234567889999966665554 455556999999987652
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCC
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
+...|+.+|...+.+++.++.+. ++++.+++||.++++..... ....+.... ..
T Consensus 154 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~----------~~ 210 (253)
T 3qiv_A 154 ---------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTT----TPKEMVDDI----------VK 210 (253)
T ss_dssp ---------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC------------------------------------
T ss_pred ---------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhc----CcHHHHHHH----------hc
Confidence 23469999999999999998775 69999999999998743210 111111111 11
Q ss_pred CcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
..+...+.+.+|+|++++.++... .+++|++++|..++
T Consensus 211 ~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~~ 252 (253)
T 3qiv_A 211 GLPLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQIIR 252 (253)
T ss_dssp ---------CCHHHHHHHHHHSGGGTTCCSCEEEC-------
T ss_pred cCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCeecC
Confidence 222345667899999999988653 47889998876553
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=171.36 Aligned_cols=221 Identities=19% Similarity=0.131 Sum_probs=155.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-cccceeEEecccchhhHhhhc---cCCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVT---KGVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~~---~~~d~vi~~a~ 99 (374)
+++|++|||||+|+||+++++.|+++|++|++++|++....... ..++.++.+|+++.+.+.++. .++|+|||+|+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag 83 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence 35689999999999999999999999999999999864432221 115678899999998887664 47999999999
Q ss_pred ccCCcccc---cCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCch
Q 017290 100 DMGGMGFI---QSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAY 172 (374)
Q Consensus 100 ~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y 172 (374)
........ ..+.+..+++|+.++..+++++. +.+..++|++||...+... ..+...|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~~~~~Y 147 (246)
T 2ag5_A 84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG----------------VVNRCVY 147 (246)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC----------------CTTBHHH
T ss_pred cCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC----------------CCCCccH
Confidence 75422121 22344567899999988888764 3455699999998664321 1134689
Q ss_pred HHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCC-CCcHHHHHHHHhccCCceEeeCCCcccccceeHHHH
Q 017290 173 GLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGM-EKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 248 (374)
Q Consensus 173 ~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 248 (374)
+.+|...|.+++.++.+. +++++++||+.++++....... ............. . .....+.+.+|+
T Consensus 148 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~dv 217 (246)
T 2ag5_A 148 STTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLK-R---------QKTGRFATAEEI 217 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHH-T---------CTTSSCEEHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHh-c---------CCCCCCCCHHHH
Confidence 999999999999987654 8999999999999863100000 0000111111111 0 112347899999
Q ss_pred HHHHHhhhccC----CCCcEEecCCC
Q 017290 249 VEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 249 a~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
|++++.++..+ .+..+++.++.
T Consensus 218 A~~v~~l~s~~~~~~tG~~i~vdgG~ 243 (246)
T 2ag5_A 218 AMLCVYLASDESAYVTGNPVIIDGGW 243 (246)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred HHHHHHHhCccccCCCCCEEEECCCc
Confidence 99999988653 36778887764
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.86 E-value=2.2e-21 Score=170.57 Aligned_cols=213 Identities=17% Similarity=0.015 Sum_probs=152.9
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEE-eCCCCccccc------ccccceeEEecccchhhHhhhcc-------CC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIAS-DWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
+|+||||||+|+||++++++|+++|++|+++ .|++...... ....+.++.+|+++.+.+.++++ ++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 3789999999999999999999999999995 6764332111 01246788999999998888775 79
Q ss_pred CEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|+|||+|+....... ...+.+..+++|+.++.++++++.. .+..++|++||...+.
T Consensus 81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------------- 143 (244)
T 1edo_A 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI----------------- 143 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------------
T ss_pred CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcC-----------------
Confidence 999999997542211 2223455788999999998887754 3566999999976542
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
+..+...|+.+|...+.+++.++.+ .+++++++||+.++++... .....+...... . .....
T Consensus 144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~~~~~~~-~---------~~~~~ 208 (244)
T 1edo_A 144 GNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA-----KLGEDMEKKILG-T---------IPLGR 208 (244)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH-----TTCHHHHHHHHT-S---------CTTCS
T ss_pred CCCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhh-----hcChHHHHHHhh-c---------CCCCC
Confidence 1123468999999999999888765 4799999999999876321 111122222111 1 11235
Q ss_pred ceeHHHHHHHHHhhhccC-----CCCcEEecCCC
Q 017290 242 FTFIDECVEGVLRLTKSD-----FREPVNIGSDE 270 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~-----~~~~~~i~~~~ 270 (374)
+++.+|+|++++.++..+ .+..+++.++.
T Consensus 209 ~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 209 TGQPENVAGLVEFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp CBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred CCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence 789999999999988432 36788888764
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=6.3e-21 Score=169.98 Aligned_cols=223 Identities=17% Similarity=0.086 Sum_probs=154.9
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc--------cccceeEEecccchhhHhhhcc-----
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED--------MFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
...+|++|||||+|+||+++++.|+++|++|++++|+........ ...+.++.+|++|.+.+.++++
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 346789999999999999999999999999999999864322110 2346788999999998887775
Q ss_pred --CCCEEEEcccccCC-ccc---ccCCcceehhhhHHHHHHHHHH----HHhCCCCeEEEeecccccCCCcccccccCCC
Q 017290 90 --GVDHVFNLAADMGG-MGF---IQSNHSVIMYNNTMISFNMLEA----SRISGVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 --~~d~vi~~a~~~~~-~~~---~~~~~~~~~~~n~~~~~~ll~a----~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|+|||+|+.... ... ...+.+..+++|+.++..++++ +++.+..++|++||...+..
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------- 158 (267)
T 1iy8_A 90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG----------- 158 (267)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB-----------
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC-----------
Confidence 78999999997532 111 2223455688899887766554 44556679999999876431
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCC--C-CCCcHHHHHHHHhccCCceEee
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWK--G-MEKAPAAFCRKALTSTDKFEMW 233 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~ 233 (374)
..+...|+.+|...+.+.+.++.+ .++++.+++||.++++..... . .............
T Consensus 159 ------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--------- 223 (267)
T 1iy8_A 159 ------IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFI--------- 223 (267)
T ss_dssp ------CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHH---------
T ss_pred ------CCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHh---------
Confidence 123468999999999999988765 479999999999987521000 0 0000000000111
Q ss_pred CCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 234 GDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 234 ~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
...+...+.+.+|+|++++.++..+ .+..+++.++..+
T Consensus 224 -~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~ 265 (267)
T 1iy8_A 224 -QVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSA 265 (267)
T ss_dssp -TTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred -ccCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence 1112335789999999999988654 3678888877554
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.7e-21 Score=169.87 Aligned_cols=219 Identities=16% Similarity=0.077 Sum_probs=158.0
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
....+|+||||||+|.||+++++.|+++|++|++++|+...... ....+.+|++|.+.+.++++ ++|++
T Consensus 10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 85 (269)
T 3vtz_A 10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVN----VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDIL 85 (269)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTT----SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccC----ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 34577999999999999999999999999999999998765422 35778899999998887765 79999
Q ss_pred EEcccccCCcccccC---CcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 95 FNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 95 i~~a~~~~~~~~~~~---~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
||+|+.......... +.+..+++|+.++..+++++.. .+..++|++||...|.. ..
T Consensus 86 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~ 148 (269)
T 3vtz_A 86 VNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAA-----------------TK 148 (269)
T ss_dssp EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB-----------------CT
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC-----------------CC
Confidence 999997543222222 2345678999999888887643 45569999999877642 22
Q ss_pred CCCchHHhHHHHHHHHHHHHhhh--CCcEEEEeeCcccCCCCCCC------CCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 168 PQDAYGLEKLASEELCKHYTKDF--GIECRVGRFHNIYGPFGTWK------GMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
....|+.+|...+.+++.++.+. ++++.+++||.+..+..... .........+... ....+.
T Consensus 149 ~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~p~ 218 (269)
T 3vtz_A 149 NAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEW----------GRQHPM 218 (269)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHH----------HHHSTT
T ss_pred CChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHH----------HhcCCC
Confidence 44689999999999999998776 79999999999987521000 0000001111111 111233
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
..+.+.+|+|++++.++... .+.++++.+|..
T Consensus 219 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 254 (269)
T 3vtz_A 219 GRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGLL 254 (269)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCcc
Confidence 46789999999999988754 378899987753
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=9.7e-21 Score=166.76 Aligned_cols=218 Identities=13% Similarity=0.054 Sum_probs=160.2
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
..++|++|||||+|+||++++++|+++|++|++++|+....... ....+.++.+|++|.+.+.++++
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 44678999999999999999999999999999999986532211 12356788999999988877764
Q ss_pred CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|+|||+|+...... ....+.+..+++|+.++.++++++.. .+..++|++||...+.
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--------------- 146 (247)
T 3lyl_A 82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSA--------------- 146 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH---------------
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc---------------
Confidence 6899999999764321 22233456788999999998887643 4445999999976643
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+......|+.+|...+.+++.++.+ .++++.+++||.+..+... ......... .. ...+.
T Consensus 147 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-----~~~~~~~~~-~~---------~~~~~ 209 (247)
T 3lyl_A 147 --GNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTD-----KLTDEQKSF-IA---------TKIPS 209 (247)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTT-----TSCHHHHHH-HH---------TTSTT
T ss_pred --CCCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccch-----hccHHHHHH-Hh---------hcCCC
Confidence 2234568999999999999888765 4799999999999877532 111222111 11 12234
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
..+.+.+|+|++++.++... .++.+++.+|..+
T Consensus 210 ~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 210 GQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGGMYM 246 (247)
T ss_dssp CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred CCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence 46889999999999988653 3788999887654
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-20 Score=168.64 Aligned_cols=213 Identities=14% Similarity=0.080 Sum_probs=154.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeC-CCCcccccc-------cccceeEEecccch----hhHhhhcc---
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDW-KKNEHMTED-------MFCHEFHLVDLRVM----DNCLKVTK--- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~-------~~~i~~~~~dl~~~----~~~~~~~~--- 89 (374)
.+|++|||||+|+||+++++.|+++|++|++++| +........ ...+.++.+|+++. +.+..+++
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 89 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 89 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence 5689999999999999999999999999999999 543211110 22467889999999 87777664
Q ss_pred ----CCCEEEEcccccCCccccc--------------CCcceehhhhHHHHHHHHHHHHhC---CC------CeEEEeec
Q 017290 90 ----GVDHVFNLAADMGGMGFIQ--------------SNHSVIMYNNTMISFNMLEASRIS---GV------KRFFYASS 142 (374)
Q Consensus 90 ----~~d~vi~~a~~~~~~~~~~--------------~~~~~~~~~n~~~~~~ll~a~~~~---~~------~~~i~~Ss 142 (374)
++|+|||+|+........+ .+.+..+++|+.++..+++++... +. .++|++||
T Consensus 90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS 169 (276)
T 1mxh_A 90 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD 169 (276)
T ss_dssp HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred HhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECc
Confidence 7999999999753211111 233457889999999999988763 33 69999999
Q ss_pred ccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHH
Q 017290 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAF 219 (374)
Q Consensus 143 ~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~ 219 (374)
...+. +..+...|+.+|...+.+++.++.+. ++++.+++||.++++ .. .....
T Consensus 170 ~~~~~-----------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~------~~~~~ 225 (276)
T 1mxh_A 170 AMTDL-----------------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PA------MPQET 225 (276)
T ss_dssp GGGGS-----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SS------SCHHH
T ss_pred hhhcC-----------------CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-cc------CCHHH
Confidence 87753 22344689999999999999987664 799999999999988 21 11222
Q ss_pred HHHHhccCCceEeeCCCccccc-ceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 220 CRKALTSTDKFEMWGDGLQTRS-FTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~-~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
...... .. .... +.+.+|+|++++.++..+ .+..+++.++..
T Consensus 226 ~~~~~~-~~---------p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~ 272 (276)
T 1mxh_A 226 QEEYRR-KV---------PLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 272 (276)
T ss_dssp HHHHHT-TC---------TTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHh-cC---------CCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence 222221 11 1123 789999999999988653 367888887643
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-20 Score=167.68 Aligned_cols=207 Identities=15% Similarity=0.046 Sum_probs=151.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEEEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHVFN 96 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi~ 96 (374)
.++|++|||||+|+||+++++.|+++|++|++++|+...........+.++.+|++|.+.+.++++ ++|++||
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 93 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN 93 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 356889999999999999999999999999999998655433333467888999999988887775 7899999
Q ss_pred cccccCCccccc---CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 97 LAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 97 ~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
+||........+ .+.+..+++|+.++.++++++ ++.+..++|++||...+.. ....
T Consensus 94 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----------------~~~~ 156 (266)
T 3p19_A 94 NAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKT-----------------FPDH 156 (266)
T ss_dssp CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------------CTTC
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCC-----------------CCCC
Confidence 999764322222 233456889999998877665 3556679999999876532 2344
Q ss_pred CchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHH
Q 017290 170 DAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFID 246 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 246 (374)
..|+.+|...+.+.+.++.+ .++++.+++||.+..+...... .......+.... .+...+++.+
T Consensus 157 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~------------~~~~r~~~pe 223 (266)
T 3p19_A 157 AAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTT-SQQIKDGYDAWR------------VDMGGVLAAD 223 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCS-CHHHHHHHHHHH------------HHTTCCBCHH
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhccc-chhhhHHHHhhc------------ccccCCCCHH
Confidence 68999999999999988776 5799999999999887422110 000011111000 0123478999
Q ss_pred HHHHHHHhhhccCC
Q 017290 247 ECVEGVLRLTKSDF 260 (374)
Q Consensus 247 Dva~~i~~~~~~~~ 260 (374)
|+|++++.++.++.
T Consensus 224 dvA~av~~l~~~~~ 237 (266)
T 3p19_A 224 DVARAVLFAYQQPQ 237 (266)
T ss_dssp HHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHcCCC
Confidence 99999999998875
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.3e-21 Score=175.49 Aligned_cols=235 Identities=13% Similarity=0.032 Sum_probs=151.1
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-----------cccccceeEEecccchhhHhhhcc--
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-----------EDMFCHEFHLVDLRVMDNCLKVTK-- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~~i~~~~~dl~~~~~~~~~~~-- 89 (374)
.+++|++|||||+|+||+++++.|+++|++|+++.|+...... .....+.++.+|++|.+.+..+++
T Consensus 2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~ 81 (324)
T 3u9l_A 2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI 81 (324)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence 3456899999999999999999999999999999987422110 011246889999999998888776
Q ss_pred -----CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccC
Q 017290 90 -----GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVS 157 (374)
Q Consensus 90 -----~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~ 157 (374)
++|+|||+||....... ...+....+++|+.++.++++++ ++.+..++|++||...+..
T Consensus 82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~--------- 152 (324)
T 3u9l_A 82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGG--------- 152 (324)
T ss_dssp HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccC---------
Confidence 89999999997532212 22234556899999999999988 5566679999999876532
Q ss_pred CCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCC--CCcHHHHHHHHhccCCceEe
Q 017290 158 LKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGM--EKAPAAFCRKALTSTDKFEM 232 (374)
Q Consensus 158 ~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 232 (374)
.......|+.+|...|.+++.++.+ .++++++++||.+.++....... ....... ........ ...
T Consensus 153 -------~~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~ 223 (324)
T 3u9l_A 153 -------TPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQ-AEYEAGPN-AGL 223 (324)
T ss_dssp -------CCSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHH-HHHHHTTT-TTH
T ss_pred -------CCCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHH-Hhhccccc-cCC
Confidence 1122467999999999999999876 58999999999998654321110 0111111 11110000 000
Q ss_pred eCCCcc-----cccceeHHHHHHHHHhhhccCC--CCcEEecCCCccCHH
Q 017290 233 WGDGLQ-----TRSFTFIDECVEGVLRLTKSDF--REPVNIGSDEMVSMN 275 (374)
Q Consensus 233 ~~~~~~-----~~~~i~~~Dva~~i~~~~~~~~--~~~~~i~~~~~~s~~ 275 (374)
...-.. .-+..+.+|+|.+++.+++.+. ...+.+.++....+.
T Consensus 224 ~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~~~ 273 (324)
T 3u9l_A 224 GEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDGAD 273 (324)
T ss_dssp HHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCSHH
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchHHH
Confidence 000000 0112578999999999998873 233333444455533
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.4e-21 Score=172.56 Aligned_cols=224 Identities=17% Similarity=0.117 Sum_probs=155.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
+.++++|||||+|+||+++++.|+++|++|++++|++...... ....+.++.+|+++.+.+.++++ +
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP 99 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4568999999999999999999999999999999986432211 01246788999999988877765 7
Q ss_pred CCEEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHHHhC------CCCeEEEeecccccCCCcccccccCCCCC
Q 017290 91 VDHVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASRIS------GVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~~~------~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
+|+|||+|+........ ..+.+..+++|+.++.++++++... +..++|++||...+.
T Consensus 100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~-------------- 165 (277)
T 2rhc_B 100 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ-------------- 165 (277)
T ss_dssp CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTS--------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccccc--------------
Confidence 99999999975422121 2234567889999999999887654 456999999976542
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhcc--CCceEeeCCC
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTS--TDKFEMWGDG 236 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 236 (374)
+..+...|+.+|...+.+++.++.+. ++++++++||.+.++... .....+ ...... ......+...
T Consensus 166 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~ 236 (277)
T 2rhc_B 166 ---GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAA-----SVREHY-SDIWEVSTEEAFDRITAR 236 (277)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHH-----HHHHHH-HHHHTCCHHHHHHHHHHH
T ss_pred ---CCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhh-----hhhhhc-ccccccchHHHHHHHHhc
Confidence 12244689999999999999987663 699999999999876310 000000 000000 0000000011
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.+..++++.+|+|++++.++..+ .+..+++.++.
T Consensus 237 ~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 237 VPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL 274 (277)
T ss_dssp STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 12345889999999999988754 36788888764
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.86 E-value=7e-21 Score=170.39 Aligned_cols=220 Identities=16% Similarity=0.099 Sum_probs=154.8
Q ss_pred CCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-----cccceeEEecccchhhHhhhcc------
Q 017290 21 YWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-----MFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 21 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
.|...+|++|||||+|+||+++++.|+++|++|++++|+........ ..++.++.+|++|.+.+.++++
T Consensus 24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELS 103 (276)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 34556789999999999999999999999999999999864321110 0146778899999988877764
Q ss_pred -CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHH----hCCC----CeEEEeecccccCCCcccccccC
Q 017290 90 -GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASR----ISGV----KRFFYASSACIYPEFKQLETNVS 157 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~----~~~i~~Ss~~vy~~~~~~~~~~~ 157 (374)
++|+|||+|+...... ....+.+..+++|+.++..+++++. +.+. .++|++||...+...
T Consensus 104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~-------- 175 (276)
T 2b4q_A 104 ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM-------- 175 (276)
T ss_dssp SCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC--------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC--------
Confidence 7999999999754211 1222345678899999987777653 3343 699999998775321
Q ss_pred CCCCCCCCCCCCC-chHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEee
Q 017290 158 LKESDAWPAEPQD-AYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMW 233 (374)
Q Consensus 158 ~~e~~~~~~~~~~-~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (374)
.... .|+.+|...+.+++.++.+ .++++.+++||.+..+... .............
T Consensus 176 ---------~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~-----~~~~~~~~~~~~~------- 234 (276)
T 2b4q_A 176 ---------GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTR-----HIANDPQALEADS------- 234 (276)
T ss_dssp ---------CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTH-----HHHHCHHHHHHHH-------
T ss_pred ---------CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchh-----hcchhHHHHHHhh-------
Confidence 1224 8999999999999998765 4799999999999876321 0110011111100
Q ss_pred CCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 234 GDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 234 ~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
...+...+.+.+|+|++++.++..+ .+..+++.++.
T Consensus 235 -~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 274 (276)
T 2b4q_A 235 -ASIPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF 274 (276)
T ss_dssp -HTSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred -cCCCCCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 0011235789999999999988753 36778887764
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.1e-21 Score=166.63 Aligned_cols=193 Identities=14% Similarity=-0.002 Sum_probs=136.4
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc--cccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED--MFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
.++++||||||+|+||+++++.|+++|++|++++|++....... ..++.++.+|++|.+.+.++++ ++|+|
T Consensus 3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (234)
T 2ehd_A 3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSAL 82 (234)
T ss_dssp -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 34578999999999999999999999999999999864322111 1156888999999988877664 78999
Q ss_pred EEcccccCCccc---ccCCcceehhhhHHHHHHHHH----HHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 95 FNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLE----ASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 95 i~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~----a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
||+|+....... ...+.+..+++|+.++..+++ .+++.+..++|++||...+. +..
T Consensus 83 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------------~~~ 145 (234)
T 2ehd_A 83 VNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKN-----------------PFK 145 (234)
T ss_dssp EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTS-----------------CCT
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcC-----------------CCC
Confidence 999996532111 222345578899998875554 44566677999999987653 223
Q ss_pred CCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccccee
Q 017290 168 PQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
+...|+.+|...+.+++.++.+ .+++++++|||.+..+... . .. .. +.+++
T Consensus 146 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------------~-~~--~~----------~~~~~ 199 (234)
T 2ehd_A 146 GGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAG-------------N-TP--GQ----------AWKLK 199 (234)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------------------------------------------CC
T ss_pred CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccc-------------c-cc--cc----------cCCCC
Confidence 4568999999999998888754 4799999999988764210 0 00 00 11578
Q ss_pred HHHHHHHHHhhhccC
Q 017290 245 IDECVEGVLRLTKSD 259 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~ 259 (374)
.+|+|++++.++..+
T Consensus 200 ~~dvA~~~~~l~~~~ 214 (234)
T 2ehd_A 200 PEDVAQAVLFALEMP 214 (234)
T ss_dssp HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999998765
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-20 Score=166.07 Aligned_cols=221 Identities=12% Similarity=0.031 Sum_probs=158.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
+++|++|||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++ +
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR 83 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3568999999999999999999999999999999986532211 12256788999999988887765 7
Q ss_pred CCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHH-----HhCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 91 VDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS-----RISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~-----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
+|++||+|+....... ...+.+..+++|+.++..+++++ ++.+..++|++||...+.
T Consensus 84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------- 148 (257)
T 3imf_A 84 IDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWD--------------- 148 (257)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGS---------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhcc---------------
Confidence 8999999996532212 22234557889999999998887 334456999999986653
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh----hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD----FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
+......|+.+|...+.+.+.++.+ .++++.+++||.+.++...... .....+..... ...+
T Consensus 149 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~--~~~~~~~~~~~----------~~~p 214 (257)
T 3imf_A 149 --AGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKL--WISEEMAKRTI----------QSVP 214 (257)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC---------CCSHHHH----------TTST
T ss_pred --CCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhc--ccCHHHHHHHH----------hcCC
Confidence 2224468999999999998888743 4899999999999987532100 00000001111 1122
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
...+.+.+|+|++++.++... .+..+++.+|..+.
T Consensus 215 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 253 (257)
T 3imf_A 215 LGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLH 253 (257)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence 345789999999999988754 37889998887654
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.5e-21 Score=171.41 Aligned_cols=219 Identities=16% Similarity=0.073 Sum_probs=159.4
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-c-------cccccceeEEecccchhhHhhhcc------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-T-------EDMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~-------~~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
..+|++|||||+|.||+++++.|+++|++|++++|+..... . .....+.++.+|++|.+.+..+++
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL 126 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999988743111 0 012246788899999888777664
Q ss_pred -CCCEEEEcccccCCc----ccccCCcceehhhhHHHHHHHHHHHHhCCCC--eEEEeecccccCCCcccccccCCCCCC
Q 017290 90 -GVDHVFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMLEASRISGVK--RFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~--~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|++||+|+..... +....+.+..+++|+.++.++++++...-.+ ++|++||...+..
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~-------------- 192 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQP-------------- 192 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSC--------------
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccC--------------
Confidence 789999999974321 1122334667899999999999998765444 9999999877642
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
......|+.+|...+.+.+.++.+. ++++.+++||.++++..... .........+......
T Consensus 193 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~-------------~~~~~~~~~~~~~~p~ 256 (294)
T 3r3s_A 193 ---SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG-------------GQTQDKIPQFGQQTPM 256 (294)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTT-------------TSCGGGSTTTTTTSTT
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccccccc-------------CCCHHHHHHHHhcCCC
Confidence 2344689999999999999988764 89999999999987531000 0000001111222334
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
..+...+|+|++++.++... .+.++++.+|..+
T Consensus 257 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~l 293 (294)
T 3r3s_A 257 KRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHL 293 (294)
T ss_dssp SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 56788999999999988654 3788999888655
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=8.2e-21 Score=168.57 Aligned_cols=225 Identities=15% Similarity=0.057 Sum_probs=153.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc-ccccc-------cccceeEEecccchhhHhhhcc-------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE-HMTED-------MFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~-------~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
.+|++|||||+|+||+++++.|+++|++|++++|+... ..... ...+.++.+|++|.+.+.++++
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 82 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 56899999999999999999999999999999998654 21110 1246778899999998877765
Q ss_pred CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|++||+|+....... ...+.+..+++|+.++..+++++. +.+..++|++||...+..
T Consensus 83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------- 148 (260)
T 1x1t_A 83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA-------------- 148 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--------------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcC--------------
Confidence 79999999996542111 222345678899999988887764 345569999999876532
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHH-HhccCCceEee-CCCc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRK-ALTSTDKFEMW-GDGL 237 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~ 237 (374)
..+...|+.+|...+.+++.++.+. ++++.+++||.+.++.... ........ ..........+ ....
T Consensus 149 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (260)
T 1x1t_A 149 ---SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEK-----QISALAEKNGVDQETAARELLSEKQ 220 (260)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------------CHHHHC
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHH-----hhhhhccccCCchHHHHHHHhhccC
Confidence 2244689999999999999887664 7999999999998874211 00000000 00000000000 0011
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+...+.+.+|+|++++.++..+ .+..+++.++..
T Consensus 221 p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~~ 258 (260)
T 1x1t_A 221 PSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT 258 (260)
T ss_dssp TTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCcc
Confidence 2345889999999999988653 367888887643
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.3e-21 Score=174.68 Aligned_cols=231 Identities=16% Similarity=0.095 Sum_probs=147.6
Q ss_pred CCCcccccccchhhhhccCCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeE
Q 017290 1 MGSTEGTYGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFH 74 (374)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~ 74 (374)
||++...+.++-. + ........+++||||||+|+||++++++|+++|++|++++|+....... ....+.++
T Consensus 9 ~~~~~~~~~~~~~--m-~~~m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 85 (301)
T 3tjr_A 9 MGTLEAQTQGPGS--M-DGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGV 85 (301)
T ss_dssp ------------------CCCCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred ccchhhcccCCcc--c-hhHHhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEE
Confidence 5665554444432 1 1111124668999999999999999999999999999999986542221 12256789
Q ss_pred EecccchhhHhhhcc-------CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHH----hCC-CCeEEE
Q 017290 75 LVDLRVMDNCLKVTK-------GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASR----ISG-VKRFFY 139 (374)
Q Consensus 75 ~~dl~~~~~~~~~~~-------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~----~~~-~~~~i~ 139 (374)
.+|++|.+.+.++++ ++|+|||+||...... ....+.+..+++|+.++.++++++. +.+ ..++|+
T Consensus 86 ~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~ 165 (301)
T 3tjr_A 86 VCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAF 165 (301)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEE
T ss_pred EccCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 999999998887765 7999999999754221 2223345678899999999988764 333 348999
Q ss_pred eecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcH
Q 017290 140 ASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAP 216 (374)
Q Consensus 140 ~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~ 216 (374)
+||...+. +......|+.+|...+.+++.++.+. ++++.+++||.+..+. .
T Consensus 166 isS~~~~~-----------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~---------~ 219 (301)
T 3tjr_A 166 TASFAGLV-----------------PNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKL---------V 219 (301)
T ss_dssp ECCGGGTS-----------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSH---------H
T ss_pred eCchhhcC-----------------CCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccc---------c
Confidence 99987653 22345689999999999998887653 7999999999997652 1
Q ss_pred HHHHHH----HhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC
Q 017290 217 AAFCRK----ALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 217 ~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~ 260 (374)
...... ......+...++.......+++.+|+|++++.+++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~~ 267 (301)
T 3tjr_A 220 SNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILANR 267 (301)
T ss_dssp HHHHHHC----------------------CCCHHHHHHHHHHHHHHTC
T ss_pred cccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcCC
Confidence 111000 00001111122222234568999999999999998764
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.7e-21 Score=170.90 Aligned_cols=221 Identities=10% Similarity=-0.050 Sum_probs=158.6
Q ss_pred CCCCeEEEEcCc--chhHHHHHHHHHhCCCEEEEEeCCCCcc---cccc--cccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAG--GFIASHIARRLKSEGHYIIASDWKKNEH---MTED--MFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~--~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
.++|++|||||+ |+||+++++.|+++|++|++++|+.... .... ...+.++.+|+++.+.+..+++
T Consensus 6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG 85 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 456899999999 9999999999999999999999986310 0000 0135788999999998887765
Q ss_pred CCCEEEEcccccCC----c---ccccCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCC
Q 017290 90 GVDHVFNLAADMGG----M---GFIQSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 ~~d~vi~~a~~~~~----~---~~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|+|||+|+.... . .....+.+..+++|+.++.++++++...- ..++|++||...+..
T Consensus 86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------ 153 (261)
T 2wyu_A 86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV------------ 153 (261)
T ss_dssp SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB------------
T ss_pred CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC------------
Confidence 78999999996531 1 12223345678899999999999987652 138999999766431
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
..+...|+.+|...+.+++.++.+. ++++.+++||.++++.... ......+...... ..
T Consensus 154 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~-~~--------- 215 (261)
T 2wyu_A 154 -----VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS---IPGFTKMYDRVAQ-TA--------- 215 (261)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGG---CTTHHHHHHHHHH-HS---------
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhh---ccccHHHHHHHHh-cC---------
Confidence 1234579999999999999988764 8999999999999874211 0111222222211 11
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccCH
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSM 274 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s~ 274 (374)
+...+.+.+|+|++++.++... .+..+++.++..++.
T Consensus 216 p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~ 256 (261)
T 2wyu_A 216 PLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMG 256 (261)
T ss_dssp TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred CCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccccC
Confidence 1234678999999999988643 367899988766543
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-20 Score=167.44 Aligned_cols=217 Identities=15% Similarity=0.071 Sum_probs=155.2
Q ss_pred CCCCCeEEEEcCcch-hHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc-----
Q 017290 23 PSEKLRISVTGAGGF-IASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
...++++|||||+|+ ||++++++|+++|++|++++|+....... ....+.++.+|+++.+.+.++++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 346789999999985 99999999999999999999986532211 11357889999999998877764
Q ss_pred --CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhC-----CCCeEEEeecccccCCCcccccccCCC
Q 017290 90 --GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRIS-----GVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~-----~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|+|||+|+....... ...+.+..+++|+.++.++++++... +..++|++||...+.
T Consensus 99 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------------ 166 (266)
T 3o38_A 99 AGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR------------ 166 (266)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC------------
T ss_pred hCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC------------
Confidence 78999999997543222 22234557889999999998887543 445899999976653
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
+..+...|+.+|...+.+++.++.+ .++++.+++||.+..+.... ... ......+...
T Consensus 167 -----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~~~---------~~~~~~~~~~ 227 (266)
T 3o38_A 167 -----AQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEK-----TSS---------SELLDRLASD 227 (266)
T ss_dssp -----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------------------------C
T ss_pred -----CCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhc-----cCc---------HHHHHHHHhc
Confidence 2234578999999999999998876 57999999999998764210 000 0111111223
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.....+.+.+|+|++++.++... .++++++.+|.
T Consensus 228 ~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~ 265 (266)
T 3o38_A 228 EAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR 265 (266)
T ss_dssp CTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred CCcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence 34456889999999999988753 37788888763
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=3e-20 Score=166.10 Aligned_cols=223 Identities=13% Similarity=0.036 Sum_probs=155.2
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhc-------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVT------- 88 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~------- 88 (374)
|...+|++|||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|+++.+.+..++
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF 96 (273)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 345678999999999999999999999999999999986432211 1224678899999998887766
Q ss_pred -cCCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 89 -KGVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 89 -~~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
.++|++||+|+....... ...+.+..+++|+.++..+++++. +.+..++|++||...+..
T Consensus 97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~------------ 164 (273)
T 1ae1_A 97 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA------------ 164 (273)
T ss_dssp TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC------------
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCC------------
Confidence 479999999997532211 222345567899999999988773 445569999999877642
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCC-CcHHHHHHHHhccCCceEeeCCC
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGME-KAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
..+...|+.+|...+.+.+.++.+. ++++.+++||.++++........ .....+...... .
T Consensus 165 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~--------- 229 (273)
T 1ae1_A 165 -----LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIV-K--------- 229 (273)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHH-H---------
T ss_pred -----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHh-c---------
Confidence 2234689999999999999987664 89999999999998752210000 000111111111 0
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
.+...+.+.+|+|++++.++... .+.++++.++..
T Consensus 230 ~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 268 (273)
T 1ae1_A 230 TPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT 268 (273)
T ss_dssp STTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCcc
Confidence 11234789999999999988653 377888887754
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.6e-20 Score=166.05 Aligned_cols=220 Identities=16% Similarity=0.021 Sum_probs=159.2
Q ss_pred CCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc--
Q 017290 19 EPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK-- 89 (374)
Q Consensus 19 ~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~-- 89 (374)
|..++.+++++|||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+..+++
T Consensus 21 m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 21 MTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAV 100 (269)
T ss_dssp ---CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 444556778999999999999999999999999999998854321110 12246788999999998887765
Q ss_pred -----CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccC
Q 017290 90 -----GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVS 157 (374)
Q Consensus 90 -----~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~ 157 (374)
++|++||+|+....... ...+.+..+++|+.++..+++++. +.+..++|++||...+.
T Consensus 101 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------- 170 (269)
T 4dmm_A 101 IERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM---------- 170 (269)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHH----------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC----------
Confidence 79999999997643222 223345578899999999888763 34556999999976542
Q ss_pred CCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeC
Q 017290 158 LKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWG 234 (374)
Q Consensus 158 ~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (374)
+......|+.+|...+.+.+.++.+ .++++.+++||.+..+... . .....+..
T Consensus 171 -------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~------~---~~~~~~~~-------- 226 (269)
T 4dmm_A 171 -------GNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTS------E---LAAEKLLE-------- 226 (269)
T ss_dssp -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSC------H---HHHHHHGG--------
T ss_pred -------CCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccc------c---ccHHHHHh--------
Confidence 1223468999999999999888765 4799999999999887421 1 11111111
Q ss_pred CCcccccceeHHHHHHHHHhhhccC-----CCCcEEecCCCccC
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSD-----FREPVNIGSDEMVS 273 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~-----~~~~~~i~~~~~~s 273 (374)
......+.+.+|+|++++.++..+ .+.++++.+|..++
T Consensus 227 -~~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~s 269 (269)
T 4dmm_A 227 -VIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVMA 269 (269)
T ss_dssp -GCTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCCC
T ss_pred -cCCCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeecC
Confidence 112345788999999999998762 37889998876553
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-20 Score=164.74 Aligned_cols=206 Identities=14% Similarity=0.089 Sum_probs=152.2
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCC-------EEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc---
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGH-------YIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK--- 89 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~--- 89 (374)
+|+||||||+|+||+++++.|+++|+ +|++++|++...... ....+.++.+|+++.+.+.++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 47899999999999999999999999 999999986432211 12246788999999988887765
Q ss_pred ----CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCC
Q 017290 90 ----GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 90 ----~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
++|+|||+|+....... ...+.+..+++|+.++.++++++. +.+..++|++||...+..
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------- 151 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA---------- 151 (244)
T ss_dssp HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------
T ss_pred HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCC----------
Confidence 79999999997532211 222345568899999999988774 345569999999877642
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCC
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
..+...|+.+|...|.+++.++.+ .+++++++|||.++++..... . . .
T Consensus 152 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--------------~-~-------~ 202 (244)
T 2bd0_A 152 -------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV--------------D-D-------E 202 (244)
T ss_dssp -------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC--------------C-S-------T
T ss_pred -------CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc--------------c-c-------c
Confidence 234568999999999999887654 579999999999998753210 0 0 0
Q ss_pred CcccccceeHHHHHHHHHhhhccCC----CCcEEecCCCcc
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSDF----REPVNIGSDEMV 272 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~~----~~~~~i~~~~~~ 272 (374)
. ...+++.+|+|++++.++..+. +.++...+++.+
T Consensus 203 ~--~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~~~~~ 241 (244)
T 2bd0_A 203 M--QALMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTSGDI 241 (244)
T ss_dssp T--GGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEETTCCC
T ss_pred c--cccCCCHHHHHHHHHHHHhCCccccchheEEecccccc
Confidence 0 2368999999999999998753 344444444433
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.9e-21 Score=170.12 Aligned_cols=225 Identities=14% Similarity=0.013 Sum_probs=152.9
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CC
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
|..+++++|||||+|.||++++++|+++|++|++++|+....... ....+.++.+|+++.+.+.++++ ++
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 84 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKV 84 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 455779999999999999999999999999999999986542221 12246889999999998887765 78
Q ss_pred CEEEEcccccCCcc-c---ccCCcceehhhhHHHHHHHHHHHHhC----C----CCeEEEeecccccCCCcccccccCCC
Q 017290 92 DHVFNLAADMGGMG-F---IQSNHSVIMYNNTMISFNMLEASRIS----G----VKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 92 d~vi~~a~~~~~~~-~---~~~~~~~~~~~n~~~~~~ll~a~~~~----~----~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
|++||+|+...... . ...+.+..+++|+.++.++++++... + ..++|++||...+.
T Consensus 85 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------------ 152 (261)
T 3n74_A 85 DILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR------------ 152 (261)
T ss_dssp CEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS------------
T ss_pred CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC------------
Confidence 99999999754211 1 22234556889999988888776432 1 23799999976653
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
+......|+.+|...+.+++.++.+ .++++.+++|+.+..+... .++.... ......+...
T Consensus 153 -----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~---------~~~~~~~--~~~~~~~~~~ 216 (261)
T 3n74_A 153 -----PRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLT---------TFMGEDS--EEIRKKFRDS 216 (261)
T ss_dssp -----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------------
T ss_pred -----CCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhh---------hhcccCc--HHHHHHHhhc
Confidence 2233467999999999999998876 4799999999999876421 0100000 0011111222
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccCH
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSM 274 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s~ 274 (374)
.+...+++.+|+|++++.++... .+.++++.++..++-
T Consensus 217 ~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~ 258 (261)
T 3n74_A 217 IPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGG 258 (261)
T ss_dssp CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred CCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence 34456899999999999988643 478899998877654
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.3e-21 Score=171.86 Aligned_cols=221 Identities=14% Similarity=0.061 Sum_probs=155.5
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc------CCCEEE
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK------GVDHVF 95 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~------~~d~vi 95 (374)
|..++|++|||||+|.||++++++|+++|++|++++|+...........+.++.+|++|.+.+..+++ ++|++|
T Consensus 5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv 84 (257)
T 3tl3_A 5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVV 84 (257)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence 44567899999999999999999999999999999996543322223457889999999998887775 899999
Q ss_pred EcccccCCcc-------cccCCcceehhhhHHHHHHHHHHHHhC------------CCCeEEEeecccccCCCccccccc
Q 017290 96 NLAADMGGMG-------FIQSNHSVIMYNNTMISFNMLEASRIS------------GVKRFFYASSACIYPEFKQLETNV 156 (374)
Q Consensus 96 ~~a~~~~~~~-------~~~~~~~~~~~~n~~~~~~ll~a~~~~------------~~~~~i~~Ss~~vy~~~~~~~~~~ 156 (374)
|+|+...... ....+.+..+++|+.++..+++++... +..++|++||...+...
T Consensus 85 ~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------- 157 (257)
T 3tl3_A 85 NCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ------- 157 (257)
T ss_dssp ECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH-------
T ss_pred ECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC-------
Confidence 9999643110 223345667899999999999887642 22389999998765321
Q ss_pred CCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEee
Q 017290 157 SLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMW 233 (374)
Q Consensus 157 ~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (374)
.+...|+.+|...+.+.+.++.+ .++++.+++||.+..+... ............ .. +.
T Consensus 158 ----------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~-----~~~~~~~~~~~~-~~--~~- 218 (257)
T 3tl3_A 158 ----------IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLA-----SLPEEARASLGK-QV--PH- 218 (257)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC--------CHHHHHHHHH-TS--SS-
T ss_pred ----------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhh-----hccHHHHHHHHh-cC--CC-
Confidence 12358999999999999888765 4799999999999876421 111222222211 11 00
Q ss_pred CCCcccccceeHHHHHHHHHhhhccC--CCCcEEecCCCccC
Q 017290 234 GDGLQTRSFTFIDECVEGVLRLTKSD--FREPVNIGSDEMVS 273 (374)
Q Consensus 234 ~~~~~~~~~i~~~Dva~~i~~~~~~~--~~~~~~i~~~~~~s 273 (374)
...+.+.+|+|++++.++..+ .+.++++.+|..++
T Consensus 219 -----~~r~~~p~dva~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tl3_A 219 -----PSRLGNPDEYGALAVHIIENPMLNGEVIRLDGAIRMA 255 (257)
T ss_dssp -----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred -----CCCccCHHHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence 135789999999999999875 47889998876654
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.1e-21 Score=170.98 Aligned_cols=223 Identities=13% Similarity=0.004 Sum_probs=147.8
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc----CCCEEEEccccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK----GVDHVFNLAADM 101 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~----~~d~vi~~a~~~ 101 (374)
||+||||||+|+||+++++.|+++|++|++++|+...... . +.+|+++.+.+.++++ ++|+|||+|+..
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~ 73 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG 73 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 5789999999999999999999999999999998654321 1 5689999888888775 459999999964
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCccccc-ccCCCCCC----------CCCC
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLET-NVSLKESD----------AWPA 166 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~-~~~~~e~~----------~~~~ 166 (374)
.. ....+..+++|+.++..+++++. +.+..++|++||...+......+. ...+.+.+ ..+.
T Consensus 74 ~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (257)
T 1fjh_A 74 PQ----TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQ 149 (257)
T ss_dssp TT----CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTT
T ss_pred CC----cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCC
Confidence 31 23467789999999999988775 455579999999988732111000 00000000 0022
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
.+...|+.+|...+.+++.++.+ .++++++++||.+.++..... ........... .+ ......++
T Consensus 150 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~------~~--~~~~~~~~ 217 (257)
T 1fjh_A 150 GGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG----LQDPRYGESIA------KF--VPPMGRRA 217 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------------------------------C--CCSTTSCC
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh----ccchhHHHHHH------hc--ccccCCCC
Confidence 23468999999999999988765 579999999999987642100 00000000000 00 11223578
Q ss_pred eHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 244 FIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+.+|+|++++.++..+ .+..+++.++..
T Consensus 218 ~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~ 249 (257)
T 1fjh_A 218 EPSEMASVIAFLMSPAASYVHGAQIVIDGGID 249 (257)
T ss_dssp CTHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred CHHHHHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence 9999999999998764 367788877643
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.3e-21 Score=169.16 Aligned_cols=212 Identities=14% Similarity=-0.000 Sum_probs=152.1
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCE-EEEEeCCCCccc--ccc----cccceeEEecccch-hhHhhhcc-----
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHM--TED----MFCHEFHLVDLRVM-DNCLKVTK----- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~--~~~----~~~i~~~~~dl~~~-~~~~~~~~----- 89 (374)
.+.+|+++||||+|+||++++++|+++|++ |++++|+..... ... ...+.++.+|++|. +.+.++++
T Consensus 2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T 1sby_A 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence 346789999999999999999999999996 999999864211 000 12467889999998 77766654
Q ss_pred --CCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-------CCeEEEeecccccCCCcccccccCCCC
Q 017290 90 --GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-------VKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-------~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|+|||+|+.. ...+.+..+++|+.++.++++++...- ..++|++||...+..
T Consensus 82 ~g~id~lv~~Ag~~-----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------ 144 (254)
T 1sby_A 82 LKTVDILINGAGIL-----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA------------ 144 (254)
T ss_dssp HSCCCEEEECCCCC-----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC------------
T ss_pred cCCCCEEEECCccC-----CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC------------
Confidence 799999999963 234567789999999999998876421 247999999877632
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
......|+.+|...+.+++.++.+ .++++++++||.+.++..............+....
T Consensus 145 -----~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~------------- 206 (254)
T 1sby_A 145 -----IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL------------- 206 (254)
T ss_dssp -----CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH-------------
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHH-------------
Confidence 223468999999999999998765 68999999999998763110000000000001111
Q ss_pred ccccceeHHHHHHHHHhhhccC-CCCcEEecCC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD-FREPVNIGSD 269 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~-~~~~~~i~~~ 269 (374)
...++.+.+|+|++++.+++.. .+..|++.++
T Consensus 207 ~~~~~~~~~dvA~~i~~~~~~~~~G~~~~v~gG 239 (254)
T 1sby_A 207 LSHPTQTSEQCGQNFVKAIEANKNGAIWKLDLG 239 (254)
T ss_dssp TTSCCEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred hcCCCCCHHHHHHHHHHHHHcCCCCCEEEEeCC
Confidence 0123458999999999988755 4778888876
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=7.9e-21 Score=168.36 Aligned_cols=218 Identities=15% Similarity=0.019 Sum_probs=157.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEE-eCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIAS-DWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
+++++|||||+|+||+++++.|+++|++|+++ .|+....... ....+.++.+|++|.+.+.++++ +
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR 82 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 56899999999999999999999999999987 6665422111 12256789999999998877764 6
Q ss_pred CCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+|++||+|+....... ...+.+..+++|+.++..+++++ ++.+..++|++||...+.
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~---------------- 146 (258)
T 3oid_A 83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIR---------------- 146 (258)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTS----------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCC----------------
Confidence 7999999996432222 22234456889999999998877 344555999999987653
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
+..+...|+.+|...+.+++.++.+. ++++.+++||.+..+..... .....+...... ..+..
T Consensus 147 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~----------~~p~~ 212 (258)
T 3oid_A 147 -YLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHF---PNREDLLEDARQ----------NTPAG 212 (258)
T ss_dssp -BCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGC---TTHHHHHHHHHH----------HCTTS
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhc---ccCHHHHHHHHh----------cCCCC
Confidence 22345789999999999999998764 79999999999987642110 011122222211 11234
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
.+.+.+|+|++++.++... .+.++++.+|...
T Consensus 213 r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 248 (258)
T 3oid_A 213 RMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSL 248 (258)
T ss_dssp SCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGGG
T ss_pred CCcCHHHHHHHHHHHhCcccCCccCCEEEECCCccC
Confidence 5789999999999998764 3788999887543
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.85 E-value=9.7e-21 Score=165.92 Aligned_cols=212 Identities=16% Similarity=0.139 Sum_probs=152.1
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhc-------cCCCEEEEcc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT-------KGVDHVFNLA 98 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~-------~~~d~vi~~a 98 (374)
+|++|||||+|+||+++++.|+++|++|++++|++.... ...++.++.+|+++ +++.+++ .++|++||+|
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~A 78 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAA--QSLGAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAA 78 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH--HHHTCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HhhCcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECC
Confidence 478999999999999999999999999999999875411 11136788899998 7665554 3799999999
Q ss_pred cccCCcc---cccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCc
Q 017290 99 ADMGGMG---FIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA 171 (374)
Q Consensus 99 ~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~ 171 (374)
+...... ....+.+..+++|+.++..+++++ ++.+..++|++||...+... ...+...
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------~~~~~~~ 143 (239)
T 2ekp_A 79 AVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG---------------GPVPIPA 143 (239)
T ss_dssp CCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------TTSCCHH
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC---------------CCCCCcc
Confidence 9653211 122334567889999988888776 34566799999998776431 1134568
Q ss_pred hHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcH--HHHHHHHhccCCceEeeCCCcccccceeHH
Q 017290 172 YGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAP--AAFCRKALTSTDKFEMWGDGLQTRSFTFID 246 (374)
Q Consensus 172 y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 246 (374)
|+.+|...+.+.+.++.+. +++++++|||.+.++... ... ..+...... ..+...+.+.+
T Consensus 144 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~~~~~~~~~----------~~p~~~~~~~~ 208 (239)
T 2ekp_A 144 YTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTL-----PLRQNPELYEPITA----------RIPMGRWARPE 208 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH-----HHHTCHHHHHHHHT----------TCTTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhh-----ccccCHHHHHHHHh----------cCCCCCCcCHH
Confidence 9999999999999987764 899999999999876311 000 111111111 11123578999
Q ss_pred HHHHHHHhhhccC----CCCcEEecCCC
Q 017290 247 ECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 247 Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
|+|++++.++..+ .+..+++.++.
T Consensus 209 dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 209 EIARVAAVLCGDEAEYLTGQAVAVDGGF 236 (239)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHHcCchhcCCCCCEEEECCCc
Confidence 9999999988653 36778887663
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.4e-21 Score=172.06 Aligned_cols=221 Identities=14% Similarity=0.095 Sum_probs=158.5
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-----cccccceeEEecccchhhHhhhcc------C
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-----EDMFCHEFHLVDLRVMDNCLKVTK------G 90 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~i~~~~~dl~~~~~~~~~~~------~ 90 (374)
+...+|++|||||+|.||+++++.|+++|++|++++|....... .....+.++.+|++|.+.+..+.+ +
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~ 106 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRR 106 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCC
Confidence 34567899999999999999999999999999999976431110 112346788999999888776643 7
Q ss_pred CCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+|++||+|+....... ...+.+..+++|+.++..+++++ ++.+..++|++||...+.
T Consensus 107 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~---------------- 170 (273)
T 3uf0_A 107 VDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQ---------------- 170 (273)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------
T ss_pred CcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcC----------------
Confidence 9999999997643222 22234567889999999998876 345556999999987653
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
+..+...|+.+|...+.+++.++.+ .++++.+++||.+..+..... ............ ..+..
T Consensus 171 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~----------~~p~~ 236 (273)
T 3uf0_A 171 -GGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL---RADDERAAEITA----------RIPAG 236 (273)
T ss_dssp -CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH---HTSHHHHHHHHH----------HSTTS
T ss_pred -CCCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc---ccCHHHHHHHHh----------cCCCC
Confidence 2234568999999999999999876 579999999999997642100 000111111111 11233
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
.+.+.+|+|++++.++... .+.++++.+|...
T Consensus 237 r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG~~~ 272 (273)
T 3uf0_A 237 RWATPEDMVGPAVFLASDAASYVHGQVLAVDGGWLA 272 (273)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCHHHHHHHHHHHhCchhcCCcCCEEEECcCccC
Confidence 5788999999999988753 3788999887654
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-20 Score=167.31 Aligned_cols=227 Identities=13% Similarity=0.012 Sum_probs=162.6
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhcc-------CCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
..+|++|||||+|.||+++++.|+++|++|++++|+........ ...+.++.+|++|.+.+..+++ ++|+
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL 85 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 35689999999999999999999999999999999865422211 2356889999999988876654 7899
Q ss_pred EEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 94 VFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 94 vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
+||+|+....... ...+.+..+++|+.++..+++++...- ..++|++||...+.. ..+
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~~ 148 (255)
T 4eso_A 86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG-----------------HPG 148 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB-----------------CTT
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC-----------------CCC
Confidence 9999997643222 223345678999999999999887632 238999999876532 224
Q ss_pred CCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeH
Q 017290 169 QDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
...|+.+|...+.+.+.++.+. ++++.+++||.+..+..............+...... ..+...+.+.
T Consensus 149 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~p 219 (255)
T 4eso_A 149 MSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDN---------ITPMKRNGTA 219 (255)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHH---------HSTTSSCBCH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhc---------cCCCCCCcCH
Confidence 4689999999999999988764 799999999999987532111111111111111110 1123457799
Q ss_pred HHHHHHHHhhhccC---CCCcEEecCCCccCHHH
Q 017290 246 DECVEGVLRLTKSD---FREPVNIGSDEMVSMNE 276 (374)
Q Consensus 246 ~Dva~~i~~~~~~~---~~~~~~i~~~~~~s~~e 276 (374)
+|+|++++.++... .+..+++.+|...++.+
T Consensus 220 edvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~~ 253 (255)
T 4eso_A 220 DEVARAVLFLAFEATFTTGAKLAVDGGLGQKLST 253 (255)
T ss_dssp HHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBCC
T ss_pred HHHHHHHHHHcCcCcCccCCEEEECCCccccCcC
Confidence 99999999887642 37889999887766543
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.3e-21 Score=165.79 Aligned_cols=207 Identities=11% Similarity=0.017 Sum_probs=153.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc---CCCEEEEcccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK---GVDHVFNLAAD 100 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~---~~d~vi~~a~~ 100 (374)
.++|++|||||+|+||++++++|+++|++|++++|+.. +|++|.+.+.++++ ++|++||+|+.
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~id~lv~nAg~ 69 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETIGAFDHLIVTAGS 69 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCSEEEEEECCCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 45688999999999999999999999999999998754 78999888887775 78999999997
Q ss_pred cCCc----ccccCCcceehhhhHHHHHHHHHHHHhCCC--CeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHH
Q 017290 101 MGGM----GFIQSNHSVIMYNNTMISFNMLEASRISGV--KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGL 174 (374)
Q Consensus 101 ~~~~----~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~--~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~ 174 (374)
.... +....+.+..+++|+.++..+++++...-. .++|++||...+. +..+...|+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------------~~~~~~~Y~a 132 (223)
T 3uce_A 70 YAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRK-----------------VVANTYVKAA 132 (223)
T ss_dssp CCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTS-----------------CCTTCHHHHH
T ss_pred CCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhcc-----------------CCCCchHHHH
Confidence 5211 122233455688999999999999876432 2899999987653 2234568999
Q ss_pred hHHHHHHHHHHHHhhhC-CcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHH
Q 017290 175 EKLASEELCKHYTKDFG-IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVL 253 (374)
Q Consensus 175 sK~~~E~~~~~~~~~~~-~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~ 253 (374)
+|...+.+.+.++.+.. +++..++||.+..+...... ......+...... ..+...+.+.+|+|++++
T Consensus 133 sK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~~~~dvA~~~~ 201 (223)
T 3uce_A 133 INAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMN-ADDRDAMYQRTQS----------HLPVGKVGEASDIAMAYL 201 (223)
T ss_dssp HHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSC-HHHHHHHHHHHHH----------HSTTCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcc-hhhHHHHHHHHhh----------cCCCCCccCHHHHHHHHH
Confidence 99999999999988765 99999999999876422110 0111111111111 112345789999999999
Q ss_pred hhhccC--CCCcEEecCCCcc
Q 017290 254 RLTKSD--FREPVNIGSDEMV 272 (374)
Q Consensus 254 ~~~~~~--~~~~~~i~~~~~~ 272 (374)
.++... .+..+++.+|..+
T Consensus 202 ~l~~~~~~tG~~i~vdgG~~~ 222 (223)
T 3uce_A 202 FAIQNSYMTGTVIDVDGGALL 222 (223)
T ss_dssp HHHHCTTCCSCEEEESTTGGG
T ss_pred HHccCCCCCCcEEEecCCeec
Confidence 998765 4788999887654
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-20 Score=163.87 Aligned_cols=217 Identities=17% Similarity=0.052 Sum_probs=150.4
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC-Ccccc-c--ccccceeEEecccchhhHhhhcc-------CCC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK-NEHMT-E--DMFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~-~--~~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
+.+|++|||||+|+||+++++.|+++|++|++++|++ ..... . ....+.++.+|++|.+.+.++++ ++|
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD 84 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 3568999999999999999999999999999999987 32211 0 11246788999999988877753 799
Q ss_pred EEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHH----HHhCCCCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 93 HVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEA----SRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 93 ~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a----~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
+|||+|+....... ...+.+..+++|+.++.+++++ +++.+..++|++||...+..
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------- 147 (249)
T 2ew8_A 85 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK----------------- 147 (249)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC-----------------
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC-----------------
Confidence 99999997542212 2223455788999998777776 45556679999999877642
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccc
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (374)
..+...|+.+|...+.+.+.++.+ .++++.+++||.+.++.... ...... ..... .+. .....+
T Consensus 148 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~-~~~~~---~~~-----~~~~~~ 214 (249)
T 2ew8_A 148 IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA----SALSAM-FDVLP---NML-----QAIPRL 214 (249)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------------CTT-----SSSCSC
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchh----ccccch-hhHHH---Hhh-----CccCCC
Confidence 223468999999999999998766 47999999999998764210 000000 00000 000 122357
Q ss_pred eeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 243 TFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.+.+|+|++++.++..+ .+..+++.++.
T Consensus 215 ~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~ 246 (249)
T 2ew8_A 215 QVPLDLTGAAAFLASDDASFITGQTLAVDGGM 246 (249)
T ss_dssp CCTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred CCHHHHHHHHHHHcCcccCCCCCcEEEECCCc
Confidence 89999999999988653 36778887764
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-20 Score=166.27 Aligned_cols=220 Identities=18% Similarity=0.095 Sum_probs=152.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
+|++|||||+|+||+++++.|+++|++|++++|++...... ....+.++.+|++|.+.+.++++ ++|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 47899999999999999999999999999999986432211 01246788999999998887775 799
Q ss_pred EEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
++||+|+........ ..+.+..+++|+.++..+++++.. .+ ..++|++||...+..
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------- 145 (256)
T 1geg_A 82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG---------------- 145 (256)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC----------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC----------------
Confidence 999999965322122 223455788999998887776543 34 459999999765421
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhc-----cCCceEeeCCC
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALT-----STDKFEMWGDG 236 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 236 (374)
......|+.+|...+.+++.++.+ .++++.+++||.+.++.. ..+...... .......+...
T Consensus 146 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (256)
T 1geg_A 146 -NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMW---------AEIDRQVSEAAGKPLGYGTAEFAKR 215 (256)
T ss_dssp -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHH---------HHHHHHHHHHHTCCTTHHHHHHHTT
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchh---------hhhhhhccccccCChHHHHHHHHhc
Confidence 123468999999999999988765 479999999999987521 111000000 00000000111
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
.+...+.+.+|+|++++.++..+ .+..+.+.++..
T Consensus 216 ~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 254 (256)
T 1geg_A 216 ITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV 254 (256)
T ss_dssp CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred CCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence 12235789999999999988653 367788887654
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.85 E-value=5.4e-21 Score=170.16 Aligned_cols=217 Identities=13% Similarity=0.042 Sum_probs=153.3
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CC
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
+...+|++|||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++ ++
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGI 102 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence 345678999999999999999999999999999999986542221 12256788999999998887765 79
Q ss_pred CEEEEcccccCCc---ccccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGM---GFIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|++||+|+..... .....+.+..+++|+.++..+.+++ ++.+..++|++||...+..
T Consensus 103 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~---------------- 166 (266)
T 3grp_A 103 DILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVG---------------- 166 (266)
T ss_dssp CEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC---------------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCC----------------
Confidence 9999999975421 1222345567889999976666654 4455569999999765421
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
..+...|+.+|...+.+.+.++.+ .++++.+++||.+..+... ........... ...+...
T Consensus 167 -~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~-----~~~~~~~~~~~----------~~~p~~r 230 (266)
T 3grp_A 167 -NPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTD-----KLNEKQKEAIM----------AMIPMKR 230 (266)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHH-----TCCHHHHHHHH----------TTCTTCS
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhh-----ccCHHHHHHHH----------hcCCCCC
Confidence 123468999999999999888765 4799999999999875311 11112222211 1223446
Q ss_pred ceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 242 FTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
+.+.+|+|++++.++... .+.++++.+|.
T Consensus 231 ~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 231 MGIGEEIAFATVYLASDEAAYLTGQTLHINGGM 263 (266)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence 788999999999988654 37788888764
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.4e-20 Score=165.18 Aligned_cols=207 Identities=14% Similarity=0.023 Sum_probs=151.3
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCC---CEEEEEeCCCCcccccc-----cccceeEEecccchhhHhhhcc----
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEG---HYIIASDWKKNEHMTED-----MFCHEFHLVDLRVMDNCLKVTK---- 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~-----~~~i~~~~~dl~~~~~~~~~~~---- 89 (374)
...++|+||||||+|+||++++++|++.| ++|++++|+........ ..++.++.+|+++.+.+..+++
T Consensus 17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 96 (267)
T 1sny_A 17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEG 96 (267)
T ss_dssp ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHH
Confidence 34567899999999999999999999999 99999999876432211 1257889999999998888776
Q ss_pred -----CCCEEEEcccccC-Cccc---ccCCcceehhhhHHHHHHHHHHHHhC----------C-----CCeEEEeecccc
Q 017290 90 -----GVDHVFNLAADMG-GMGF---IQSNHSVIMYNNTMISFNMLEASRIS----------G-----VKRFFYASSACI 145 (374)
Q Consensus 90 -----~~d~vi~~a~~~~-~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~----------~-----~~~~i~~Ss~~v 145 (374)
++|+|||+|+... .... ...+.+..+++|+.++..+++++... + ..+||++||...
T Consensus 97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 176 (267)
T 1sny_A 97 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG 176 (267)
T ss_dssp HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred hcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc
Confidence 7999999999754 1111 22234557889999999998887543 2 358999999877
Q ss_pred cCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHH
Q 017290 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRK 222 (374)
Q Consensus 146 y~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~ 222 (374)
+.... +..+...|+.+|...|.+++.++.+ .+++++++|||.+..+...
T Consensus 177 ~~~~~--------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------------- 228 (267)
T 1sny_A 177 SIQGN--------------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG-------------- 228 (267)
T ss_dssp CSTTC--------------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC--------------
T ss_pred cccCC--------------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCC--------------
Confidence 64321 1124568999999999999998766 5899999999999765310
Q ss_pred HhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC---CCCcEEecCCCcc
Q 017290 223 ALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD---FREPVNIGSDEMV 272 (374)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~---~~~~~~i~~~~~~ 272 (374)
. ..++..+|+|+.++.++... ..+.|...++..+
T Consensus 229 ----~------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~ 265 (267)
T 1sny_A 229 ----S------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL 265 (267)
T ss_dssp ----T------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred ----C------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCc
Confidence 0 12467899999999998764 2444444334443
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.85 E-value=9.8e-22 Score=175.41 Aligned_cols=219 Identities=12% Similarity=0.056 Sum_probs=159.1
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+...+|++|||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 455779999999999999999999999999999999986532211 12246788899999998887775
Q ss_pred -CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 -GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|++||+|+....... ...+.+..+++|+.++..+++++.. .+..++|++||...+.
T Consensus 102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~-------------- 167 (271)
T 4ibo_A 102 IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL-------------- 167 (271)
T ss_dssp CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------
T ss_pred CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC--------------
Confidence 79999999997543222 2233455788999999998776643 3455999999976542
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcH--HHHHHHHhccCCceEeeCCC
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAP--AAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 236 (374)
+..+...|+.+|...+.+++.++.+ .++++.+++||.+..+... ... ..+...... .
T Consensus 168 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~-----~~~~~~~~~~~~~~----------~ 229 (271)
T 4ibo_A 168 ---ARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQ-----ALIDNPEFDAWVKA----------R 229 (271)
T ss_dssp ---BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH-----HHHHCHHHHHHHHH----------H
T ss_pred ---CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchh-----hcccCHHHHHHHHh----------c
Confidence 2234568999999999999998766 5799999999999876321 000 111111111 1
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
.+...+.+.+|+|.+++.++... .+.++++.+|...
T Consensus 230 ~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~ 269 (271)
T 4ibo_A 230 TPAKRWGKPQELVGTAVFLSASASDYVNGQIIYVDGGMLS 269 (271)
T ss_dssp STTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEECCCeec
Confidence 12335678899999999888653 3788999887654
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=166.84 Aligned_cols=224 Identities=15% Similarity=0.019 Sum_probs=154.0
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc-----
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
+...+|++|||||+|.||+++++.|+++|++|+++.++...... .....+.++.+|++|.+.+..+++
T Consensus 4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999998554432111 112346788999999998887775
Q ss_pred --CCCEEEEcccccCC-c---ccccCCcceehhhhHHHHHHHHHHHHhCCCC--eEEEeecccccCCCcccccccCCCCC
Q 017290 90 --GVDHVFNLAADMGG-M---GFIQSNHSVIMYNNTMISFNMLEASRISGVK--RFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 --~~d~vi~~a~~~~~-~---~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~--~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|++||+|+.... . .....+.+..+++|+.++..+++++...-.+ ++|++||...+..
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------- 150 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG------------- 150 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC-------------
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC-------------
Confidence 78999999986521 1 1122233567899999999999998765433 8999999876511
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhhhC--CcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKDFG--IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+......|+.+|...+.+.+.++.+.+ +++.+++||.+..+.... .... ..........+.
T Consensus 151 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~-----~~~~---------~~~~~~~~~~p~ 213 (259)
T 3edm_A 151 ---GGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDT-----FTKP---------EVRERVAGATSL 213 (259)
T ss_dssp ---CSTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-----------------------------------
T ss_pred ---CCCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCccccc-----ccCh---------HHHHHHHhcCCC
Confidence 123446899999999999999987754 889999999998763210 0000 000111122334
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCCCccCHH
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSMN 275 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s~~ 275 (374)
..+.+.+|+|++++.++... .+..+++.++......
T Consensus 214 ~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~~~ 253 (259)
T 3edm_A 214 KREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLFSEG 253 (259)
T ss_dssp -CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC--
T ss_pred CCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcCCCCC
Confidence 56789999999999988654 4788999887655443
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=4.2e-21 Score=170.78 Aligned_cols=222 Identities=13% Similarity=0.099 Sum_probs=158.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
..+|++|||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++ +
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3568999999999999999999999999999999986432211 12256788999999998877764 7
Q ss_pred CCEEEEcccccCCc-c---cccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 91 VDHVFNLAADMGGM-G---FIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 91 ~d~vi~~a~~~~~~-~---~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
+|++||+|+..... . ....+.+..+++|+.++..+++++.. .+ .++|++||...+.
T Consensus 89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~--------------- 152 (264)
T 3ucx_A 89 VDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRH--------------- 152 (264)
T ss_dssp CSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGC---------------
T ss_pred CcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhcc---------------
Confidence 89999999864221 1 12233455688999999999887643 33 5999999987653
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhc-cC----CceEeeC
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALT-ST----DKFEMWG 234 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~ 234 (374)
+......|+.+|...+.+.+.++.+ .++++.+++||.++++.. ..+...... .+ .....+.
T Consensus 153 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 221 (264)
T 3ucx_A 153 --SQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTL---------KSYFEHQAGKYGTSVEDIYNAAA 221 (264)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHH---------HHHHHHHHHHTTCCHHHHHHHHH
T ss_pred --CCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccH---------HHHHHhhhhhcCCCHHHHHHHHh
Confidence 2234468999999999999998876 579999999999987631 111110000 00 0000111
Q ss_pred CCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
...+...+.+.+|+|++++.++... .+.++++.+|..+
T Consensus 222 ~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 263 (264)
T 3ucx_A 222 AGSDLKRLPTEDEVASAILFMASDLASGITGQALDVNCGEYK 263 (264)
T ss_dssp TTSSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred ccCCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence 2233456889999999999988653 3788999887653
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.6e-20 Score=164.04 Aligned_cols=212 Identities=14% Similarity=0.075 Sum_probs=151.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEEEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHVFN 96 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi~ 96 (374)
+.+|+||||||+|+||+++++.|+++|++|++++|++...... ..+.+|++|.+.+.++++ ++|++||
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~ 87 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVS 87 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----EEEECCTTCHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh-----cCeeccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4568999999999999999999999999999999986543221 237899999988877764 6899999
Q ss_pred cccccCCc---ccccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 97 LAADMGGM---GFIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 97 ~a~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
+|+..... .....+.+..+++|+.++..+++++. +.+..++|++||...+.. ..+.
T Consensus 88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~~~ 150 (247)
T 1uzm_A 88 NAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG-----------------IGNQ 150 (247)
T ss_dssp ECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------------CC
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccC-----------------CCCC
Confidence 99975321 12223445678899999999888764 355669999999765421 1234
Q ss_pred CchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHH
Q 017290 170 DAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFID 246 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 246 (374)
..|+.+|...+.+.+.++.+ .++++.+++||.+..+... ............ ......+.+.+
T Consensus 151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-----~~~~~~~~~~~~----------~~p~~~~~~~~ 215 (247)
T 1uzm_A 151 ANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR-----ALDERIQQGALQ----------FIPAKRVGTPA 215 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-----HSCHHHHHHHGG----------GCTTCSCBCHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh-----hcCHHHHHHHHh----------cCCCCCCcCHH
Confidence 68999999999999888765 4799999999999765210 000111111111 01123578999
Q ss_pred HHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 247 ECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 247 Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
|+|++++.++..+ .+..+++.++..+
T Consensus 216 dvA~~~~~l~s~~~~~~~G~~i~vdgG~~~ 245 (247)
T 1uzm_A 216 EVAGVVSFLASEDASYISGAVIPVDGGMGM 245 (247)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred HHHHHHHHHcCccccCCcCCEEEECCCccc
Confidence 9999999988653 3678888877543
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.85 E-value=2.3e-20 Score=164.40 Aligned_cols=218 Identities=17% Similarity=0.046 Sum_probs=159.4
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CC
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
+..++|++|||||+|.||+++++.|+++|++|++++|+....... .......+.+|++|.+.+.++++ ++
T Consensus 5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (248)
T 3op4_A 5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGV 84 (248)
T ss_dssp TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 345678999999999999999999999999999999986532211 11245778999999998887775 79
Q ss_pred CEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|++||+|+....... ...+.+..+++|+.++..+++++.. .+..++|++||...+.
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------------- 147 (248)
T 3op4_A 85 DILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM----------------- 147 (248)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC-----------------
Confidence 999999997643222 2234456788999999999887643 4455999999976542
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
+..+...|+.+|...+.+.+.++.+ .++++.+++||.+..+.... ........... ..+...
T Consensus 148 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-----~~~~~~~~~~~----------~~p~~r 212 (248)
T 3op4_A 148 GNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA-----LNDEQRTATLA----------QVPAGR 212 (248)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTT-----SCHHHHHHHHH----------TCTTCS
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhh-----cCHHHHHHHHh----------cCCCCC
Confidence 2234568999999999999888765 47999999999998764321 11122222111 112345
Q ss_pred ceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 242 FTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+.+.+|+|++++.++... .++++++.+|..
T Consensus 213 ~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~~ 246 (248)
T 3op4_A 213 LGDPREIASAVAFLASPEAAYITGETLHVNGGMY 246 (248)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred CcCHHHHHHHHHHHcCCccCCccCcEEEECCCee
Confidence 789999999999988654 378888887643
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=168.79 Aligned_cols=219 Identities=15% Similarity=0.009 Sum_probs=155.9
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc------cccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED------MFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+.+++|+||||||+|+||++++++|+++|++|++++|+........ ...+.++.+|+++.+.+.++++
T Consensus 30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 109 (279)
T 3ctm_A 30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF 109 (279)
T ss_dssp GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence 3456789999999999999999999999999999999875422110 1246788999999988887765
Q ss_pred -CCCEEEEcccccCC-c----ccccCCcceehhhhHHH----HHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCC
Q 017290 90 -GVDHVFNLAADMGG-M----GFIQSNHSVIMYNNTMI----SFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 -~~d~vi~~a~~~~~-~----~~~~~~~~~~~~~n~~~----~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|+|||+|+.... . .....+....+++|+.+ ++.++..+++.+..+||++||...+...
T Consensus 110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 179 (279)
T 3ctm_A 110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN---------- 179 (279)
T ss_dssp SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-----------
T ss_pred CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC----------
Confidence 49999999997532 1 11122334568889998 5666777777777899999998764320
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
...+...|+.+|...|.+++.++.+. + ++.+++|+.+..+.... ........... .
T Consensus 180 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~-----~~~~~~~~~~~-~--------- 238 (279)
T 3ctm_A 180 -----IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDF-----ASKDMKAKWWQ-L--------- 238 (279)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSS-----CCHHHHHHHHH-H---------
T ss_pred -----CCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccc-----cChHHHHHHHH-h---------
Confidence 12345689999999999999998763 5 89999999998774311 11112111111 0
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
.+...+++.+|+|++++.++..+ .+..+++.++..
T Consensus 239 ~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~ 277 (279)
T 3ctm_A 239 TPLGREGLTQELVGGYLYLASNASTFTTGSDVVIDGGYT 277 (279)
T ss_dssp STTCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred CCccCCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence 01224789999999999988753 367888887654
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-20 Score=169.33 Aligned_cols=227 Identities=17% Similarity=0.087 Sum_probs=158.9
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc---CCCEEEE
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK---GVDHVFN 96 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~---~~d~vi~ 96 (374)
...+|+++||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++ ++|++||
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~ 92 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLIN 92 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence 34678999999999999999999999999999999986542211 12357889999999999988886 6799999
Q ss_pred cccccCCc-ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHh
Q 017290 97 LAADMGGM-GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLE 175 (374)
Q Consensus 97 ~a~~~~~~-~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~s 175 (374)
+||..... .....+.+..+++|+.++..+++++.....+++|++||...+....... ...++. .+..+...|+.+
T Consensus 93 nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~---~~~~~~-~~~~~~~~Y~~s 168 (291)
T 3rd5_A 93 NAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLE---DLNWRS-RRYSPWLAYSQS 168 (291)
T ss_dssp CCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSS---CTTCSS-SCCCHHHHHHHH
T ss_pred CCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcc---cccccc-cCCCCcchHHHH
Confidence 99976422 2334556778999999999999999888777999999988775432110 111111 133455789999
Q ss_pred HHHHHHHHHHHHhhh---C--CcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHH
Q 017290 176 KLASEELCKHYTKDF---G--IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE 250 (374)
Q Consensus 176 K~~~E~~~~~~~~~~---~--~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 250 (374)
|...+.+++.++.+. + +++.+++||.+..+.... ....+ ...+. .. ...+-..+.+|+|+
T Consensus 169 K~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~-----~~~~~-~~~~~-----~~----~~~~~~~~~~~~A~ 233 (291)
T 3rd5_A 169 KLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGA-----SGRKL-GDALM-----SA----ATRVVATDADFGAR 233 (291)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------------------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccc-----cchHH-HHHHH-----HH----HHHHHhCCHHHHHH
Confidence 999999999887664 4 999999999998764211 11111 11110 00 01122345899999
Q ss_pred HHHhhhccC--CCCcEEecC
Q 017290 251 GVLRLTKSD--FREPVNIGS 268 (374)
Q Consensus 251 ~i~~~~~~~--~~~~~~i~~ 268 (374)
+++.++..+ .+..+.+.+
T Consensus 234 ~~~~l~~~~~~~G~~~~vdg 253 (291)
T 3rd5_A 234 QTLYAASQDLPGDSFVGPRF 253 (291)
T ss_dssp HHHHHHHSCCCTTCEEEETT
T ss_pred HHHHHHcCCCCCCceeCCcc
Confidence 999988775 345555554
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=9.8e-20 Score=163.39 Aligned_cols=225 Identities=16% Similarity=0.086 Sum_probs=156.6
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-------------------ccccccceeEEecccchhh
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-------------------TEDMFCHEFHLVDLRVMDN 83 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------------------~~~~~~i~~~~~dl~~~~~ 83 (374)
...++++|||||+|.||+++++.|+++|++|++++|+..... ......+.++.+|++|.+.
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA 91 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 346789999999999999999999999999999998532100 0011246788899999998
Q ss_pred Hhhhcc-------CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH----hCC-CCeEEEeecccccCC
Q 017290 84 CLKVTK-------GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISG-VKRFFYASSACIYPE 148 (374)
Q Consensus 84 ~~~~~~-------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~-~~~~i~~Ss~~vy~~ 148 (374)
+.++++ ++|++||+|+....... ...+.+..+++|+.++.++++++. +.+ ..++|++||...+..
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 171 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA 171 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC
Confidence 887765 79999999997643222 222345568899999999888763 333 348999999876532
Q ss_pred CcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhc
Q 017290 149 FKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALT 225 (374)
Q Consensus 149 ~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~ 225 (374)
......|+.+|...+.+.+.++.+ .++++.+++||.++++... .......+.....
T Consensus 172 -----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~----~~~~~~~~~~~~~ 230 (280)
T 3pgx_A 172 -----------------TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIE----PEAMMEIFARHPS 230 (280)
T ss_dssp -----------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCC----HHHHHHHHHHCGG
T ss_pred -----------------CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccc----hhhhhhhhhcCch
Confidence 223468999999999999998876 5799999999999987531 0011111111100
Q ss_pred cCCceEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 226 STDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 226 ~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
....+.. ...... .+.+.+|+|++++.++... .+.++++.+|.
T Consensus 231 ~~~~~~~-~~~~~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 231 FVHSFPP-MPVQPN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp GGGGSCC-BTTBCS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred hhhhhhh-cccCCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 0011111 111222 5899999999999988654 37788888764
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-20 Score=168.45 Aligned_cols=222 Identities=14% Similarity=0.041 Sum_probs=156.0
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
+.+++++|||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+..+++
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 34668999999999999999999999999999999986532211 12356788999999998877764
Q ss_pred CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHh------CCCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRI------SGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~------~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+|+........+ .+.+..+++|+.++..+++++.. .+..++|++||...+.
T Consensus 101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~------------- 167 (279)
T 3sju_A 101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ------------- 167 (279)
T ss_dssp SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS-------------
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc-------------
Confidence 7899999999764322222 23445678999999999987654 4455999999987653
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCC-----C-CCCcHHHHHHHHhccCCceE
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWK-----G-MEKAPAAFCRKALTSTDKFE 231 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~ 231 (374)
+......|+.+|...+.+++.++.+ .++++.+++||.+..+..... . ............
T Consensus 168 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-------- 235 (279)
T 3sju_A 168 ----GVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERF-------- 235 (279)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHH--------
T ss_pred ----CCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHH--------
Confidence 2234568999999999999998876 579999999999986521000 0 000011111111
Q ss_pred eeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 232 MWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 232 ~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
....+...+.+.+|+|++++.++... .+..+++.+|..
T Consensus 236 --~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~ 277 (279)
T 3sju_A 236 --NAKIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGLG 277 (279)
T ss_dssp --HTTCTTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTCC
T ss_pred --HhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence 11223446789999999999988754 378888887643
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.85 E-value=9.2e-21 Score=168.74 Aligned_cols=220 Identities=16% Similarity=0.101 Sum_probs=158.2
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
...+|++|||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 45678999999999999999999999999999999986532211 12356889999999998877765
Q ss_pred -CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccccCCCcccccccCCCC
Q 017290 90 -GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+|+........+ .+.+..+++|+.++..+++++.. .+ ..++|++||...+.
T Consensus 97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~------------- 163 (266)
T 4egf_A 97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA------------- 163 (266)
T ss_dssp TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-------------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc-------------
Confidence 7999999999764322222 23455688999999888887643 22 34899999987653
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+......|+.+|...+.+.+.++.+ .++++.+++||.+..+..... ........... ...
T Consensus 164 ----~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~----------~~~ 226 (266)
T 4egf_A 164 ----PLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRV---WGDEAKSAPMI----------ARI 226 (266)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHH---TCSHHHHHHHH----------TTC
T ss_pred ----CCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhh---ccChHHHHHHH----------hcC
Confidence 2234568999999999999998876 479999999999987521000 00011111111 112
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
+...+.+.+|+|++++.++... .+.++++.+|..+
T Consensus 227 p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 265 (266)
T 4egf_A 227 PLGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYTM 265 (266)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCCccC
Confidence 2345788999999999988753 3788999877543
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-20 Score=168.08 Aligned_cols=220 Identities=17% Similarity=0.092 Sum_probs=157.6
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
..+|++|||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++ ++|+
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 106 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK 106 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4678999999999999999999999999999999986532221 12246788999999988877664 7899
Q ss_pred EEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 94 VFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 94 vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
+||+|+...... ....+.+..+++|+.++..+++++.. .+..++|++||...+. +.
T Consensus 107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------------~~ 169 (277)
T 3gvc_A 107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV-----------------AV 169 (277)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------------CC
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-----------------CC
Confidence 999999764322 22233456788999999888887643 4455899999976643 22
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCC-ce-EeeCC---Ccc
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTD-KF-EMWGD---GLQ 238 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~---~~~ 238 (374)
.+...|+.+|...+.+++.++.+ .++++.+++||.++++.. ........ .. ..... ...
T Consensus 170 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~-------------~~~~~~~~~~~~~~~~~~~~~~~ 236 (277)
T 3gvc_A 170 GGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQ-------------QTAMAMFDGALGAGGARSMIARL 236 (277)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-------------HHHHTCC------CCHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchH-------------HHhhhcchhhHHHHhhhhhhhcc
Confidence 34568999999999999988765 579999999999987521 11110000 00 00000 112
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
...+.+.+|+|++++.++... .+.++++.+|...+
T Consensus 237 ~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 237 QGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAA 275 (277)
T ss_dssp HSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred ccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCcchhc
Confidence 235789999999999998654 37889998876544
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=165.73 Aligned_cols=217 Identities=15% Similarity=0.055 Sum_probs=156.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHh-CCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-----CCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKS-EGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-----GVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-----~~d~vi~~a 98 (374)
++|++|||||+|.||+++++.|++ .|+.|++++|+..... ..+.++.+|+++.+.+.++++ ++|++||+|
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nA 78 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA----ENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNA 78 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC----TTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc----ccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECC
Confidence 568899999999999999999999 7899999998765221 245889999999998888775 789999999
Q ss_pred cccCCccc---ccCCcceehhhhHHHHHHHHHHHHhCCC--CeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchH
Q 017290 99 ADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRISGV--KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 173 (374)
Q Consensus 99 ~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~~~--~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~ 173 (374)
+....... ...+.+..+++|+.++..+++++...-. .++|++||...+.. ......|+
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------------~~~~~~Y~ 141 (244)
T 4e4y_A 79 GILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA-----------------KPNSFAYT 141 (244)
T ss_dssp CCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC-----------------CTTBHHHH
T ss_pred ccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC-----------------CCCCchhH
Confidence 97542222 2233455789999999999998876432 28999999876532 22346899
Q ss_pred HhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhcc-CC----ceEeeCCCcccccceeH
Q 017290 174 LEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTS-TD----KFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 174 ~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~i~~ 245 (374)
.+|...+.+.+.++.+ .++++.+++||.+..+. ...+....... +. .........+...+.+.
T Consensus 142 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 212 (244)
T 4e4y_A 142 LSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDL---------YRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQP 212 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHH---------HHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCH
T ss_pred HHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchh---------hHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCH
Confidence 9999999999998864 57999999999998652 11111110000 00 00001122234568899
Q ss_pred HHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 246 DECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 246 ~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+|+|++++.++..+ .++.+++.+|..
T Consensus 213 ~dvA~~v~~l~s~~~~~itG~~i~vdGG~~ 242 (244)
T 4e4y_A 213 QEIAELVIFLLSDKSKFMTGGLIPIDGGYT 242 (244)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHhcCccccccCCeEeECCCcc
Confidence 99999999998754 377888887654
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-20 Score=168.01 Aligned_cols=221 Identities=14% Similarity=0.055 Sum_probs=157.4
Q ss_pred CCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc--
Q 017290 19 EPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK-- 89 (374)
Q Consensus 19 ~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~-- 89 (374)
...|...+++||||||+|+||++++++|+++|++|++++|+....... ....+.++.+|+++.+.+.++++
T Consensus 22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 101 (271)
T 4iin_A 22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTI 101 (271)
T ss_dssp --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 334556778999999999999999999999999999999965432111 12256889999999988877765
Q ss_pred -----CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccC
Q 017290 90 -----GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVS 157 (374)
Q Consensus 90 -----~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~ 157 (374)
++|++||+|+....... ...+.+..+++|+.++..+++++. +.+..++|++||...+.
T Consensus 102 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------- 171 (271)
T 4iin_A 102 VQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGER---------- 171 (271)
T ss_dssp HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----------
T ss_pred HHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcC----------
Confidence 79999999997643222 222345678899999888877664 34556999999976642
Q ss_pred CCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeC
Q 017290 158 LKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWG 234 (374)
Q Consensus 158 ~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (374)
+..+...|+.+|...+.+++.++.+ .++++.+++||.+..+... ...... . ..+.
T Consensus 172 -------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-----~~~~~~-~---------~~~~ 229 (271)
T 4iin_A 172 -------GNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNA-----NLKDEL-K---------ADYV 229 (271)
T ss_dssp -------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---------------------------CG
T ss_pred -------CCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchh-----hhcHHH-H---------HHHH
Confidence 2234578999999999999998876 5799999999999876321 011001 0 0111
Q ss_pred CCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
.......+.+.+|+|++++.++..+ .++++++.+|..
T Consensus 230 ~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~~ 270 (271)
T 4iin_A 230 KNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGLY 270 (271)
T ss_dssp GGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred hcCCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCee
Confidence 2223456889999999999988754 378888887643
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-20 Score=166.39 Aligned_cols=214 Identities=15% Similarity=0.054 Sum_probs=151.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
.+|++|||||+|+||+++++.|+++|++|++++|+........ ...+.++.+|++|.+.+.++++ ++|+|
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 84 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5689999999999999999999999999999999864322111 1246788899999988877664 57999
Q ss_pred EEcccccCCccc---ccCCcceehhhhHHHHHHHHHH----HHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 95 FNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEA----SRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 95 i~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a----~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
||+|+....... ...+.+..+++|+.++..+.++ +++.+ .++|++||...+.. ..
T Consensus 85 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-----------------~~ 146 (253)
T 1hxh_A 85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLP-----------------IE 146 (253)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSC-----------------CT
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCC-----------------CC
Confidence 999997532111 2223455688898877666554 44556 79999999877532 22
Q ss_pred CCCchHHhHHHHHHHHHHHHhh---h--CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEe-eCC---Ccc
Q 017290 168 PQDAYGLEKLASEELCKHYTKD---F--GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEM-WGD---GLQ 238 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~---~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~ 238 (374)
+...|+.+|...+.+++.++.+ . +++++++||+.++++... .... ...... +.. ..+
T Consensus 147 ~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~-------------~~~~-~~~~~~~~~~~~~~~p 212 (253)
T 1hxh_A 147 QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ-------------ASLP-KGVSKEMVLHDPKLNR 212 (253)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHH-------------HHSC-TTCCHHHHBCBTTTBT
T ss_pred CCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhh-------------hccc-hhhhHHHHhhhhccCc
Confidence 3468999999999999998765 3 899999999999986310 0000 000000 001 112
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
...+.+.+|+|++++.++..+ .+..+++.++.
T Consensus 213 ~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 248 (253)
T 1hxh_A 213 AGRAYMPERIAQLVLFLASDESSVMSGSELHADNSI 248 (253)
T ss_dssp TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred cCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence 335789999999999988754 36778887764
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.84 E-value=6.1e-20 Score=162.72 Aligned_cols=221 Identities=15% Similarity=0.089 Sum_probs=155.1
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc--cccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE--HMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
+|++|||||+|+||+++++.|+++|++|++++|+... .... ....+.++.+|+++.+.+..+++ +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999999999998654 1111 12246788999999988877765 7
Q ss_pred CCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHh----CCC-CeEEEeecccccCCCcccccccCCCCCC
Q 017290 91 VDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRI----SGV-KRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
+|++||+|+....... ...+.+..+++|+.++..+++++.. .+. .++|++||...+..
T Consensus 82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------- 147 (258)
T 3a28_C 82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQG-------------- 147 (258)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSC--------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccC--------------
Confidence 9999999997542212 2223455788999999988887754 355 69999999876531
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhc--cC--Cc-eEeeC
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALT--ST--DK-FEMWG 234 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~--~~--~~-~~~~~ 234 (374)
..+...|+.+|...+.+.+.++.+ .++++.+++||.+..+. ....+..... .. .. ...+.
T Consensus 148 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 215 (258)
T 3a28_C 148 ---FPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGM---------WEQIDAELSKINGKPIGENFKEYS 215 (258)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHH---------HHHHHHHHHHHHCCCTTHHHHHHH
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChh---------hhhhhhhhccccCCchHHHHHHHH
Confidence 223468999999999999988765 47999999999997652 1111100000 00 00 00001
Q ss_pred CCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
...+...+.+.+|+|++++.++..+ .+..+++.++..+
T Consensus 216 ~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~ 257 (258)
T 3a28_C 216 SSIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGMLY 257 (258)
T ss_dssp TTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred hcCCCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEec
Confidence 1112235789999999999988654 3678888877543
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-20 Score=163.18 Aligned_cols=214 Identities=12% Similarity=0.057 Sum_probs=152.3
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
+..++|+||||||+|+||+++++.|+++|++|++++|++.... .+.++.+|++|.+.+.++++ ++|++
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~l 91 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----GFLAVKCDITDTEQVEQAYKEIEETHGPVEVL 91 (253)
T ss_dssp ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEE
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----cceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3446789999999999999999999999999999999765432 26788999999988877764 57999
Q ss_pred EEcccccCCc---ccccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 95 FNLAADMGGM---GFIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 95 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
||+|+..... .....+.+..+++|+.++..+++++.. .+..++|++||...+... .
T Consensus 92 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------------~ 154 (253)
T 2nm0_A 92 IANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS-----------------A 154 (253)
T ss_dssp EEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH-----------------H
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC-----------------C
Confidence 9999975321 123345667788999999888886643 355699999997664321 1
Q ss_pred CCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccccee
Q 017290 168 PQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
....|+.+|...+.+.+.++.+. ++++.+++||.+..+... ........... .......+++
T Consensus 155 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~-----~~~~~~~~~~~----------~~~p~~~~~~ 219 (253)
T 2nm0_A 155 GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTK-----VLTDEQRANIV----------SQVPLGRYAR 219 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC--------------CHHHHH----------TTCTTCSCBC
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchh-----hcCHHHHHHHH----------hcCCCCCCcC
Confidence 23579999999999999887663 699999999998765321 00000111111 1112235789
Q ss_pred HHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 245 IDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
.+|+|++++.++..+ .+..+.+.++..+
T Consensus 220 p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~~~ 251 (253)
T 2nm0_A 220 PEEIAATVRFLASDDASYITGAVIPVDGGLGM 251 (253)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred HHHHHHHHHHHhCccccCCcCcEEEECCcccc
Confidence 999999999988754 3677888876543
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-20 Score=168.65 Aligned_cols=215 Identities=13% Similarity=0.018 Sum_probs=148.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEE-eCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIAS-DWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
++++||||||+|+||++++++|+++|++|+++ .|+....... ....+.++.+|++|.+.+..+++ +
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 104 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR 104 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 45789999999999999999999999999887 4443321111 12356789999999988877765 7
Q ss_pred CCEEEEcccccCC-ccc---ccCCcceehhhhHHHHHHHHHHHHhC-------CCCeEEEeecccccCCCcccccccCCC
Q 017290 91 VDHVFNLAADMGG-MGF---IQSNHSVIMYNNTMISFNMLEASRIS-------GVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 91 ~d~vi~~a~~~~~-~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~-------~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
+|+|||+|+.... ... ...+.+..+++|+.++..+++++... +..++|++||...+...
T Consensus 105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 174 (272)
T 4e3z_A 105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS---------- 174 (272)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC----------
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC----------
Confidence 8999999997542 111 22334567889999999998877543 23489999997664321
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
......|+.+|...+.+++.++.+. ++++.+++||.+.++.... ......... ....
T Consensus 175 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----~~~~~~~~~----------~~~~ 234 (272)
T 4e3z_A 175 ------ATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS----GGLPDRARE----------MAPS 234 (272)
T ss_dssp ------TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------------------C
T ss_pred ------CCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc----cCChHHHHH----------Hhhc
Confidence 1123579999999999999888765 7999999999999874311 011111111 1122
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
.....+.+.+|+|++++.++... .++++++++|
T Consensus 235 ~~~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG 271 (272)
T 4e3z_A 235 VPMQRAGMPEEVADAILYLLSPSASYVTGSILNVSGG 271 (272)
T ss_dssp CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCcCCCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence 23445778999999999998653 3778898875
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=7.5e-20 Score=160.83 Aligned_cols=215 Identities=14% Similarity=0.067 Sum_probs=154.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-ccccceeEEecccchhhHhhhcc-------CCCEEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-DMFCHEFHLVDLRVMDNCLKVTK-------GVDHVF 95 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi 95 (374)
+.+|+++||||+|.||+++++.|+++|++|++++|+....... ...++.++.+|++|.+.+.++++ ++|++|
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv 82 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV 82 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4568999999999999999999999999999999986432211 11136788999999988877764 589999
Q ss_pred EcccccCCcccc---cCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 96 NLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 96 ~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
|+|+........ ..+.+..+++|+.++..+++++.. .+..++|++||...++ ...
T Consensus 83 n~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~------------------~~~ 144 (245)
T 1uls_A 83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG------------------NLG 144 (245)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC------------------CTT
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcC------------------CCC
Confidence 999975422122 223455688999999999887754 3556999999976332 123
Q ss_pred CCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeH
Q 017290 169 QDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
...|+.+|...+.+.+.++.+ .++++++++||.+..+... ............ .. ....+.+.
T Consensus 145 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-----~~~~~~~~~~~~-~~---------p~~~~~~~ 209 (245)
T 1uls_A 145 QANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA-----KVPEKVREKAIA-AT---------PLGRAGKP 209 (245)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS-----SSCHHHHHHHHH-TC---------TTCSCBCH
T ss_pred chhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchh-----hcCHHHHHHHHh-hC---------CCCCCcCH
Confidence 468999999999999888765 4799999999999876422 111112222111 10 11247899
Q ss_pred HHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 246 DECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 246 ~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+|+|++++.++..+ .+..+.+.++..
T Consensus 210 ~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 239 (245)
T 1uls_A 210 LEVAYAALFLLSDESSFITGQVLFVDGGRT 239 (245)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence 99999999988653 367788877644
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.9e-20 Score=163.25 Aligned_cols=201 Identities=16% Similarity=0.136 Sum_probs=152.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEEEEc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHVFNL 97 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi~~ 97 (374)
++|+||||||+|+||+++++.|+++|++|++++|+...... ..+.+|++|.+.+..+++ ++|+|||+
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~ 94 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCA 94 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 45889999999999999999999999999999998765332 346778888887776664 57999999
Q ss_pred ccccCCc----ccccCCcceehhhhHHHHHHHHHHHHhCCC--CeEEEeecccccCCCcccccccCCCCCCCCCCCCCCc
Q 017290 98 AADMGGM----GFIQSNHSVIMYNNTMISFNMLEASRISGV--KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA 171 (374)
Q Consensus 98 a~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~--~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~ 171 (374)
|+..... .....+.+..+++|+.++.++++++...-. .++|++||...+. +..+...
T Consensus 95 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------------~~~~~~~ 157 (251)
T 3orf_A 95 AGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN-----------------RTSGMIA 157 (251)
T ss_dssp CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------------CCTTBHH
T ss_pred CccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc-----------------CCCCCch
Confidence 9965321 122234456788999999999998876422 3899999987653 2234568
Q ss_pred hHHhHHHHHHHHHHHHhh-----hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHH
Q 017290 172 YGLEKLASEELCKHYTKD-----FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFID 246 (374)
Q Consensus 172 y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 246 (374)
|+.+|...+.+++.++.+ .++++.+++||.+..+ +..... .......+++.+
T Consensus 158 Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~-------------~~~~~~----------~~~~~~~~~~~~ 214 (251)
T 3orf_A 158 YGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTP-------------TNRKYM----------SDANFDDWTPLS 214 (251)
T ss_dssp HHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCH-------------HHHHHC----------TTSCGGGSBCHH
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCc-------------chhhhc----------ccccccccCCHH
Confidence 999999999999999877 4799999999998754 112211 112345688999
Q ss_pred HHHHHHHhhhcc-C----CCCcEEecCCCc
Q 017290 247 ECVEGVLRLTKS-D----FREPVNIGSDEM 271 (374)
Q Consensus 247 Dva~~i~~~~~~-~----~~~~~~i~~~~~ 271 (374)
|+|++++.++.. . .+..+++.+++.
T Consensus 215 dva~~i~~l~~~~~~~~~tG~~i~v~~g~~ 244 (251)
T 3orf_A 215 EVAEKLFEWSTNSDSRPTNGSLVKFETKSK 244 (251)
T ss_dssp HHHHHHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred HHHHHHHHHhcCccccCCcceEEEEecCCc
Confidence 999999999977 2 377788876654
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.8e-20 Score=166.80 Aligned_cols=219 Identities=14% Similarity=0.007 Sum_probs=157.0
Q ss_pred CCCeEEEEcCc--chhHHHHHHHHHhCCCEEEEEeCCCCcccc---c--ccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAG--GFIASHIARRLKSEGHYIIASDWKKNEHMT---E--DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~--~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
.++++|||||+ |+||+++++.|+++|++|++++|+...... . ......++.+|+++.+.+.++++ +
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK 87 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 45789999999 999999999999999999999998621000 0 00124678899999988877765 6
Q ss_pred CCEEEEcccccCC----cc----cccCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCC
Q 017290 91 VDHVFNLAADMGG----MG----FIQSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 91 ~d~vi~~a~~~~~----~~----~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
+|+|||+|+.... .. ....+.+..+++|+.++.++++++...- ..++|++||...+..
T Consensus 88 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------ 155 (265)
T 1qsg_A 88 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA------------ 155 (265)
T ss_dssp EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB------------
T ss_pred CCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC------------
Confidence 8999999996531 11 1223345678899999999999987642 138999999766531
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
..+...|+.+|...+.+++.++.+. ++++.+++||.++++.... ......+...... ..
T Consensus 156 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~-~~--------- 217 (265)
T 1qsg_A 156 -----IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG---IKDFRKMLAHCEA-VT--------- 217 (265)
T ss_dssp -----CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGG---STTHHHHHHHHHH-HS---------
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhc---ccccHHHHHHHHh-cC---------
Confidence 1234689999999999999988764 7999999999999875321 0111222222211 11
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
....+.+.+|+|++++.++... .+..+++.++..++
T Consensus 218 p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 257 (265)
T 1qsg_A 218 PIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA 257 (265)
T ss_dssp TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred CCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence 1224779999999999988653 36788998875543
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=165.76 Aligned_cols=214 Identities=15% Similarity=0.040 Sum_probs=151.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeC-CCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDW-KKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
++|++|||||+|+||+++++.|+++|++|++++| ++...... ....+.++.+|++|.+.+.++++ +
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ 82 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5689999999999999999999999999999998 43321110 11246788999999998887775 7
Q ss_pred CCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 91 VDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+|++||+|+...... ....+.+..+++|+.++..+++++ ++.+..++|++||...+..
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------- 147 (246)
T 2uvd_A 83 VDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTG--------------- 147 (246)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC---------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCC---------------
Confidence 999999999754211 122234567889999977766654 3456679999999765421
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
......|+.+|...+.+.+.++.+ .++++++++||.+..+..... .. ........ . .+..
T Consensus 148 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~---~~~~~~~~-~---------~p~~ 210 (246)
T 2uvd_A 148 --NPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVL--DE---NIKAEMLK-L---------IPAA 210 (246)
T ss_dssp --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC--CT---THHHHHHH-T---------CTTC
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhc--CH---HHHHHHHh-c---------CCCC
Confidence 123468999999999998888754 479999999999987642211 11 11111111 1 1123
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.+++.+|+|++++.++..+ .+..+++.++.
T Consensus 211 ~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 244 (246)
T 2uvd_A 211 QFGEAQDIANAVTFFASDQSKYITGQTLNVDGGM 244 (246)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCcCHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence 4789999999999988653 36778887764
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.4e-20 Score=165.46 Aligned_cols=225 Identities=16% Similarity=0.048 Sum_probs=161.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
..+|++|||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|+++.+.+..+++ +
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG 85 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999986532211 12346788899999988887765 7
Q ss_pred CCEEEEcccccCCc----ccccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 91 VDHVFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 91 ~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
+|++||+|+..... .....+.+..+++|+.++..+++++. +.+..++|++||...+..
T Consensus 86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------------- 151 (280)
T 3tox_A 86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA-------------- 151 (280)
T ss_dssp CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB--------------
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC--------------
Confidence 99999999965321 12223455678999999999888764 344459999999876521
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+..+...|+.+|...+.+++.++.+. ++++.+++||.+..+..... ........... +. ...+.
T Consensus 152 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~~~~~~~~~~-~~---------~~~p~ 218 (280)
T 3tox_A 152 --GFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFAN-LPGAAPETRGF-VE---------GLHAL 218 (280)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGG-STTCCTHHHHH-HH---------TTSTT
T ss_pred --CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhh-ccccCHHHHHH-Hh---------ccCcc
Confidence 22345689999999999999998764 79999999999998753210 00001111111 11 11223
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCCCccCHH
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSMN 275 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s~~ 275 (374)
..+.+.+|+|++++.++... .+.++++.+|..++..
T Consensus 219 ~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~~ 258 (280)
T 3tox_A 219 KRIARPEEIAEAALYLASDGASFVTGAALLADGGASVTKA 258 (280)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC-
T ss_pred CCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCcccccc
Confidence 45789999999999998764 3788999988776543
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=5.6e-20 Score=163.73 Aligned_cols=221 Identities=13% Similarity=0.031 Sum_probs=155.3
Q ss_pred CCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc--
Q 017290 19 EPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK-- 89 (374)
Q Consensus 19 ~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~-- 89 (374)
.+.....+|++|||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|+++.+.+..+++
T Consensus 14 ~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 93 (267)
T 1vl8_A 14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAV 93 (267)
T ss_dssp ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 334455678999999999999999999999999999999986432111 01245778899999988877765
Q ss_pred -----CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccc-cCCCccccccc
Q 017290 90 -----GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACI-YPEFKQLETNV 156 (374)
Q Consensus 90 -----~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~v-y~~~~~~~~~~ 156 (374)
++|+|||+|+........+ .+.+..+++|+.++..+++++. +.+..++|++||..+ +.
T Consensus 94 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~--------- 164 (267)
T 1vl8_A 94 KEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV--------- 164 (267)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC---------
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc---------
Confidence 7999999999754221222 2334568899999998888763 455679999999763 21
Q ss_pred CCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcH--HHHHHHHhccCCceE
Q 017290 157 SLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAP--AAFCRKALTSTDKFE 231 (374)
Q Consensus 157 ~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 231 (374)
+..+...|+.+|...+.+++.++.+ .++++.+++||.+..+... ... ......... .
T Consensus 165 --------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-----~~~~~~~~~~~~~~-~---- 226 (267)
T 1vl8_A 165 --------TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE-----AVFSDPEKLDYMLK-R---- 226 (267)
T ss_dssp --------CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH-----HHHTCHHHHHHHHH-T----
T ss_pred --------CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccc-----ccccChHHHHHHHh-h----
Confidence 1224568999999999999998765 4899999999999876321 000 111111111 1
Q ss_pred eeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 232 MWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 232 ~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
.....+.+.+|+|++++.++..+ .+..+.+.++..
T Consensus 227 -----~p~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~ 265 (267)
T 1vl8_A 227 -----IPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT 265 (267)
T ss_dssp -----CTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred -----CCCCCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCCC
Confidence 11234788999999999988653 367788877643
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.7e-20 Score=166.00 Aligned_cols=217 Identities=14% Similarity=0.048 Sum_probs=146.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
.++++|||||+|+||+++++.|+++|++|++++|+...... .....+.++.+|++|.+.+.++++ +
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 107 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGR 107 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 45789999999999999999999999999999975432111 012256789999999998887775 7
Q ss_pred CCEEEEcccccC--Cc---ccccCCcceehhhhHHHHHHHHHHHHhC----C---CCeEEEeecccccCCCcccccccCC
Q 017290 91 VDHVFNLAADMG--GM---GFIQSNHSVIMYNNTMISFNMLEASRIS----G---VKRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 91 ~d~vi~~a~~~~--~~---~~~~~~~~~~~~~n~~~~~~ll~a~~~~----~---~~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
+|++||+|+... .. +....+.+..+++|+.++..+++++... + ..++|++||...+.
T Consensus 108 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----------- 176 (280)
T 4da9_A 108 IDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM----------- 176 (280)
T ss_dssp CCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC---------------
T ss_pred CCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc-----------
Confidence 999999999732 11 1223345567889999998888876432 2 34899999976653
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCC
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
+......|+.+|...+.+.+.++.+ .++++.+++||.+..+.... ..... ..... ..
T Consensus 177 ------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-----~~~~~-~~~~~--------~~ 236 (280)
T 4da9_A 177 ------TSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAA-----VSGKY-DGLIE--------SG 236 (280)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------------
T ss_pred ------CCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhh-----cchhH-HHHHh--------hc
Confidence 2223468999999999999998876 57999999999998764210 10000 00000 00
Q ss_pred CcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
..+...+.+.+|+|++++.++... .+.++++.+|..+
T Consensus 237 ~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 277 (280)
T 4da9_A 237 LVPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLSI 277 (280)
T ss_dssp -----CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred CCCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence 123346789999999999998765 3788999877543
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.84 E-value=6e-21 Score=174.70 Aligned_cols=231 Identities=14% Similarity=0.076 Sum_probs=165.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC----------Ccccc------cccccceeEEecccchhhHhhh
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK----------NEHMT------EDMFCHEFHLVDLRVMDNCLKV 87 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~----------~~~~~------~~~~~i~~~~~dl~~~~~~~~~ 87 (374)
..++++|||||+|.||+++++.|+++|++|++++|+. ..... .....+.++.+|++|.+.+..+
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 104 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL 104 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 4568999999999999999999999999999999872 11100 0112467888999999988877
Q ss_pred cc-------CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhCC----------CCeEEEeecccccC
Q 017290 88 TK-------GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRISG----------VKRFFYASSACIYP 147 (374)
Q Consensus 88 ~~-------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~~----------~~~~i~~Ss~~vy~ 147 (374)
++ ++|++||+|+....... ...+.+..+++|+.++..+++++...- -.++|++||...+.
T Consensus 105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~ 184 (322)
T 3qlj_A 105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ 184 (322)
T ss_dssp HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc
Confidence 75 79999999997643222 223345678899999999988774321 13899999976642
Q ss_pred CCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHh
Q 017290 148 EFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKAL 224 (374)
Q Consensus 148 ~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~ 224 (374)
+......|+.+|...+.+++.++.+ .++++.+++|| +..+.... ......
T Consensus 185 -----------------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~-----~~~~~~---- 237 (322)
T 3qlj_A 185 -----------------GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTET-----VFAEMM---- 237 (322)
T ss_dssp -----------------CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCC-----SCCC------
T ss_pred -----------------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchh-----hhhhhh----
Confidence 1223468999999999999998876 57999999999 65442210 000000
Q ss_pred ccCCceEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc-----------------CHHHHHHHHHH
Q 017290 225 TSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV-----------------SMNEMAEIVLS 283 (374)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~-----------------s~~e~~~~i~~ 283 (374)
......+.++..+|+|.+++.++... .+..+++.+|... +..|+++.+.+
T Consensus 238 ---------~~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~ 308 (322)
T 3qlj_A 238 ---------ATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVAD 308 (322)
T ss_dssp ---------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHH
T ss_pred ---------hccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHH
Confidence 01112334678899999999988653 4778888877644 77999999999
Q ss_pred hcCCCCC
Q 017290 284 FEDKKLP 290 (374)
Q Consensus 284 ~~g~~~~ 290 (374)
.+|.+.+
T Consensus 309 ~~~~~~~ 315 (322)
T 3qlj_A 309 LLGKARP 315 (322)
T ss_dssp HHHHSCC
T ss_pred HhhccCC
Confidence 9886544
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=167.73 Aligned_cols=222 Identities=14% Similarity=0.060 Sum_probs=156.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc------cc---cceeEEecccchhhHhhhcc-----
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED------MF---CHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~---~i~~~~~dl~~~~~~~~~~~----- 89 (374)
..+|++|||||+|+||+++++.|+++|++|++++|+........ .. .+.++.+|++|.+.+.++++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 35689999999999999999999999999999999864322110 11 46788999999988877765
Q ss_pred --CCCEEEEcccccCCcc-------cccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCccccccc
Q 017290 90 --GVDHVFNLAADMGGMG-------FIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNV 156 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~~-------~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~ 156 (374)
++|+|||+|+...... ....+.+..+++|+.++..+++++.. .+ .++|++||...+...
T Consensus 84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------- 155 (280)
T 1xkq_A 84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA------- 155 (280)
T ss_dssp HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC-------
T ss_pred cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC-------
Confidence 7999999999753211 11223455688999999998887753 34 699999998765321
Q ss_pred CCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCc----HHHHHHHHhccCCc
Q 017290 157 SLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKA----PAAFCRKALTSTDK 229 (374)
Q Consensus 157 ~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~----~~~~~~~~~~~~~~ 229 (374)
..+...|+.+|...+.+.+.++.+ .++++.+++||.+.++.......... ...+... +.
T Consensus 156 ---------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~---- 221 (280)
T 1xkq_A 156 ---------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMAS-HK---- 221 (280)
T ss_dssp ---------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH-CT----
T ss_pred ---------CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHH-HH----
Confidence 023468999999999999998754 57999999999999863110000000 0011111 11
Q ss_pred eEeeCCCcccccceeHHHHHHHHHhhhccC-----CCCcEEecCCCcc
Q 017290 230 FEMWGDGLQTRSFTFIDECVEGVLRLTKSD-----FREPVNIGSDEMV 272 (374)
Q Consensus 230 ~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~-----~~~~~~i~~~~~~ 272 (374)
...+...+.+.+|+|++++.++..+ .+..+++.++..+
T Consensus 222 -----~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~ 264 (280)
T 1xkq_A 222 -----ECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL 264 (280)
T ss_dssp -----TTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred -----cCCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCccc
Confidence 1112345789999999999988643 3778888877543
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=6.4e-20 Score=161.65 Aligned_cols=216 Identities=14% Similarity=0.044 Sum_probs=147.8
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEeccc-chhhHhhhccCCCEEEEcccc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLR-VMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~-~~~~~~~~~~~~d~vi~~a~~ 100 (374)
-+..+|+||||||+|+||+++++.|+++|++|++++|++...... ..+.++ +|+. +.+.+.+.+.++|+|||+|+.
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~-~D~~~~~~~~~~~~~~iD~lv~~Ag~ 91 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS--GHRYVV-CDLRKDLDLLFEKVKEVDILVLNAGG 91 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT--CSEEEE-CCTTTCHHHHHHHSCCCSEEEECCCC
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh--CCeEEE-eeHHHHHHHHHHHhcCCCEEEECCCC
Confidence 345679999999999999999999999999999999986321111 134555 8882 233333434489999999996
Q ss_pred cCCccccc---CCcceehhhhHHHHHHHH----HHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchH
Q 017290 101 MGGMGFIQ---SNHSVIMYNNTMISFNML----EASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 173 (374)
Q Consensus 101 ~~~~~~~~---~~~~~~~~~n~~~~~~ll----~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~ 173 (374)
.......+ .+.+..+++|+.++..+. ..+++.+..++|++||...|.. ..+...|+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~~~~~Y~ 154 (249)
T 1o5i_A 92 PKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP-----------------IENLYTSN 154 (249)
T ss_dssp CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------------CTTBHHHH
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCC-----------------CCCCchHH
Confidence 54221222 234556788988866554 4455666679999999887642 22346899
Q ss_pred HhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHH
Q 017290 174 LEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE 250 (374)
Q Consensus 174 ~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 250 (374)
.+|...+.+.+.++.+ .++++++++||.++++... ..........+.. ......+++.+|+|+
T Consensus 155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~~~~~~~~---------~~p~~~~~~~~dvA~ 220 (249)
T 1o5i_A 155 SARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVK-----ELLSEEKKKQVES---------QIPMRRMAKPEEIAS 220 (249)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHH-----HHSCHHHHHHHHT---------TSTTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCccc-----ccchhhHHHHHHh---------cCCCCCCcCHHHHHH
Confidence 9999999999988765 5799999999999987421 0000111101111 112245789999999
Q ss_pred HHHhhhccC----CCCcEEecCCCc
Q 017290 251 GVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 251 ~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+++.++..+ .+..+++.++..
T Consensus 221 ~i~~l~s~~~~~~tG~~~~vdgG~~ 245 (249)
T 1o5i_A 221 VVAFLCSEKASYLTGQTIVVDGGLS 245 (249)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred HHHHHcCccccCCCCCEEEECCCcc
Confidence 999988653 367888887643
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-20 Score=167.27 Aligned_cols=218 Identities=13% Similarity=0.068 Sum_probs=158.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
.++|++|||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+..+++ +
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA 105 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 3568999999999999999999999999999999986432211 11246788899999988887765 7
Q ss_pred CCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 91 VDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+|++||+|+...... ....+.+..+++|+.++.++++++. +.+..++|++||...+.
T Consensus 106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------- 169 (270)
T 3ftp_A 106 LNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA---------------- 169 (270)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----------------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC----------------
Confidence 999999999754321 2223345678899999999988774 23445899999976642
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
+..+...|+.+|...+.+.+.++.+ .++++.+++||.+..+... ......... +. ...+..
T Consensus 170 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~-----~~~~~~~~~-~~---------~~~p~~ 233 (270)
T 3ftp_A 170 -GNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTK-----GLPQEQQTA-LK---------TQIPLG 233 (270)
T ss_dssp -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHH-----HSCHHHHHH-HH---------TTCTTC
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchh-----hcCHHHHHH-HH---------hcCCCC
Confidence 2224468999999999999888766 4799999999999865210 011111111 11 122334
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
.+.+.+|+|++++.++... .+.++++.+|..++
T Consensus 234 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~s 270 (270)
T 3ftp_A 234 RLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGMFMS 270 (270)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSCC
T ss_pred CCCCHHHHHHHHHHHhCCCcCCccCcEEEECCCcccC
Confidence 6789999999999988643 37889998876543
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-20 Score=169.60 Aligned_cols=221 Identities=12% Similarity=0.044 Sum_probs=156.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----------ccccceeEEecccchhhHhhhcc---
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----------DMFCHEFHLVDLRVMDNCLKVTK--- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------~~~~i~~~~~dl~~~~~~~~~~~--- 89 (374)
+.+++||||||+|+||++++++|+++|++|++++|+....... ....+.++.+|+++.+.+..+++
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999986432110 12356888999999998887775
Q ss_pred ----CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCC
Q 017290 90 ----GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 90 ----~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
++|+|||+|+....... ...+.+..+++|+.++.++++++.. .+..++|++||...+
T Consensus 96 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~------------ 163 (303)
T 1yxm_A 96 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA------------ 163 (303)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT------------
T ss_pred HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeeccc------------
Confidence 59999999996432111 1223455688999999999998755 224589999997622
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCC
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
+......|+.+|...+.+.+.++.+. +++++++||+.++++..... .......++.... .
T Consensus 164 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~----------~ 226 (303)
T 1yxm_A 164 ------GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVEN-YGSWGQSFFEGSF----------Q 226 (303)
T ss_dssp ------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTT-SGGGGGGGGTTGG----------G
T ss_pred ------CCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhh-ccccchHHHHHHH----------h
Confidence 11234689999999999999888764 89999999999999831100 0000001100000 0
Q ss_pred CcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
......+.+.+|+|++++.++... .+..+++.++..++
T Consensus 227 ~~p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~ 268 (303)
T 1yxm_A 227 KIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLY 268 (303)
T ss_dssp GSTTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred cCcccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence 111235789999999999988653 36789998876543
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.3e-20 Score=165.92 Aligned_cols=219 Identities=14% Similarity=-0.001 Sum_probs=158.5
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+...+|++|||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 345678999999999999999999999999999999986543221 11256788999999998888775
Q ss_pred -CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccccCCCcccccccCCCC
Q 017290 90 -GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+|+........+ .+.+..+++|+.++..+++++.. .+ ..++|++||...+...
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~----------- 176 (276)
T 3r1i_A 108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN----------- 176 (276)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC-----------
Confidence 7999999999764322222 23345678999999998887643 33 2489999997664321
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
...+...|+.+|...+.+++.++.+ .++++.+++||.+..+... ........... ..
T Consensus 177 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~------~~~~~~~~~~~----------~~ 236 (276)
T 3r1i_A 177 ----IPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVE------PLADYHALWEP----------KI 236 (276)
T ss_dssp ----CSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTG------GGGGGHHHHGG----------GS
T ss_pred ----CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccc------cchHHHHHHHh----------cC
Confidence 1124568999999999999999876 5799999999999877432 11111111111 11
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
....+...+|+|++++.++... .+.++++.+|..
T Consensus 237 p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~ 274 (276)
T 3r1i_A 237 PLGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGYT 274 (276)
T ss_dssp TTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CCCCCcCHHHHHHHHHHHcCccccCccCcEEEECcCcc
Confidence 2335778999999999988753 377888887643
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.84 E-value=9.5e-20 Score=163.88 Aligned_cols=217 Identities=12% Similarity=-0.015 Sum_probs=155.2
Q ss_pred CCCCeEEEEcCc--chhHHHHHHHHHhCCCEEEEEeCCCCc---ccccc--cccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAG--GFIASHIARRLKSEGHYIIASDWKKNE---HMTED--MFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~--~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
..++++|||||+ |+||+++++.|+++|++|++++|+... ..... ...+.++.+|+++.+.+..+++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG 98 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 456899999999 999999999999999999999998631 00000 1135788999999988877765
Q ss_pred CCCEEEEcccccCC----c---ccccCCcceehhhhHHHHHHHHHHHHhCC---CCeEEEeecccccCCCcccccccCCC
Q 017290 90 GVDHVFNLAADMGG----M---GFIQSNHSVIMYNNTMISFNMLEASRISG---VKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 ~~d~vi~~a~~~~~----~---~~~~~~~~~~~~~n~~~~~~ll~a~~~~~---~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|+|||+|+.... . .....+.+..+++|+.++..+++++...- ..++|++||...+..
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~----------- 167 (285)
T 2p91_A 99 SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKV----------- 167 (285)
T ss_dssp CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSB-----------
T ss_pred CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccC-----------
Confidence 78999999997531 0 12223345678899999999999887642 259999999766431
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
..+...|+.+|...+.+++.++.+. ++++.+++||.++++..... .....+...... ..
T Consensus 168 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~-~~-------- 229 (285)
T 2p91_A 168 ------VPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI---TGFHLLMEHTTK-VN-------- 229 (285)
T ss_dssp ------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--C---TTHHHHHHHHHH-HS--------
T ss_pred ------CCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcc---cchHHHHHHHHh-cC--------
Confidence 1234689999999999999987664 79999999999998753210 111222222111 11
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
....+.+.+|+|++++.++... .+..+++.++.
T Consensus 230 -p~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~ 266 (285)
T 2p91_A 230 -PFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGY 266 (285)
T ss_dssp -TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred -CCCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence 1224678999999999988653 36778888764
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.5e-21 Score=170.91 Aligned_cols=222 Identities=13% Similarity=0.043 Sum_probs=152.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc----c----ccccceeEEecccchhhHhhhcc-------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT----E----DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~----~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
.++++|||||+|+||+++++.|+++|++|++++|+...... . ...++.++.+|++|.+.+.++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 56799999999999999999999999999999998643211 0 12246788999999988887765
Q ss_pred CCCEEEEcccccCCcccccCCcceehhhhHHHHHHH----HHHHHhCC---CCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNM----LEASRISG---VKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l----l~a~~~~~---~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|+|||+|+... ..+.+..+++|+.++..+ +..+++.+ ..++|++||...+..
T Consensus 86 ~id~lv~~Ag~~~-----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------- 146 (267)
T 2gdz_A 86 RLDILVNNAGVNN-----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP-------------- 146 (267)
T ss_dssp CCCEEEECCCCCC-----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC--------------
T ss_pred CCCEEEECCCCCC-----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCC--------------
Confidence 5799999999642 345567788898865554 44444432 459999999877642
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHH-----hhhCCcEEEEeeCcccCCCCCCCCCCCcH-HHHHHHHhccCCceEeeCCC
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYT-----KDFGIECRVGRFHNIYGPFGTWKGMEKAP-AAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~-----~~~~~~~~ilR~~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 236 (374)
..+...|+.+|...+.+++.++ ...++++++++||.+.++... ... ........ .........
T Consensus 147 ---~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~~~~~~~---~~~~~~~~~ 215 (267)
T 2gdz_A 147 ---VAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILE-----SIEKEENMGQYI---EYKDHIKDM 215 (267)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHH-----GGGCHHHHGGGG---GGHHHHHHH
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhh-----ccccccccchhh---hHHHHHHHH
Confidence 1234579999999999988752 235799999999999865210 000 00000000 000000000
Q ss_pred cccccceeHHHHHHHHHhhhccC--CCCcEEecCCCccCHHH
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD--FREPVNIGSDEMVSMNE 276 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~--~~~~~~i~~~~~~s~~e 276 (374)
.....+++.+|+|++++.++..+ .+.++++++++.+++.|
T Consensus 216 ~~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~ 257 (267)
T 2gdz_A 216 IKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD 257 (267)
T ss_dssp HHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred hccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccC
Confidence 12235789999999999998765 47889999887766554
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-20 Score=168.39 Aligned_cols=207 Identities=15% Similarity=0.070 Sum_probs=145.6
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc--------cccceeEEecccchhhHhhhcc------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED--------MFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+.+++||||||+|+||+++++.|+++|++|++++|+........ ...+.++.+|+++.+.+.++++
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 35689999999999999999999999999999999864322110 1236778899999998877765
Q ss_pred -CCCEEEEcccccCCccc---ccCCcceehhhhHHH----HHHHHHHHHhCCC--CeEEEeecccccCCCcccccccCCC
Q 017290 90 -GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMI----SFNMLEASRISGV--KRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~----~~~ll~a~~~~~~--~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|+|||+|+....... ...+.+..+++|+.+ ++.++.++++.+. .++|++||...+...
T Consensus 110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~---------- 179 (279)
T 1xg5_A 110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL---------- 179 (279)
T ss_dssp CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccC----------
Confidence 79999999996542211 222345578899998 6677777777775 699999998776321
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh-----hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD-----FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWG 234 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (374)
+..+...|+.+|...+.+++.++.+ .++++++++|+.+..+.. .. ... ...... .
T Consensus 180 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~---------~~----~~~-~~~~~~-~ 239 (279)
T 1xg5_A 180 -----PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFA---------FK----LHD-KDPEKA-A 239 (279)
T ss_dssp -----SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHH---------HH----HTT-TCHHHH-H
T ss_pred -----CCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhh---------hh----hcc-cChhHH-h
Confidence 2233468999999999998888654 369999999999986521 00 000 000000 0
Q ss_pred CCcccccceeHHHHHHHHHhhhccCC
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~~ 260 (374)
.......+++.+|+|++++.++..+.
T Consensus 240 ~~~~~~~~~~~~dvA~~i~~l~~~~~ 265 (279)
T 1xg5_A 240 ATYEQMKCLKPEDVAEAVIYVLSTPA 265 (279)
T ss_dssp HHHC---CBCHHHHHHHHHHHHHSCT
T ss_pred hhcccccCCCHHHHHHHHHHHhcCCc
Confidence 00012347899999999999998653
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-20 Score=172.05 Aligned_cols=217 Identities=12% Similarity=-0.047 Sum_probs=140.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhcc------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
..+++||||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|+++.+.+..+++
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 4568999999999999999999999999999999986542211 11156889999999998877764
Q ss_pred -CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhC----------CCCeEEEeecccccCCCcccccc
Q 017290 90 -GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRIS----------GVKRFFYASSACIYPEFKQLETN 155 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~----------~~~~~i~~Ss~~vy~~~~~~~~~ 155 (374)
++|+|||+|+....... ...+.+..+++|+.++.++++++... +..++|++||...+..
T Consensus 86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~------- 158 (319)
T 3ioy_A 86 GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA------- 158 (319)
T ss_dssp CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC-------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC-------
Confidence 67999999997532222 22234557899999999998877542 2348999999877542
Q ss_pred cCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEe
Q 017290 156 VSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEM 232 (374)
Q Consensus 156 ~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (374)
......|+.+|...+.+.+.++.+ .++++++++||.|.++...... .....+...........+
T Consensus 159 ----------~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~~~~~ 225 (319)
T 3ioy_A 159 ----------AGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDD---IRPDALKGEVKPVDKTAV 225 (319)
T ss_dssp ----------CSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------
T ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccc---cCchhhcccccchhHHHH
Confidence 123368999999766666665433 4799999999999876422110 001111000000000000
Q ss_pred eCCCcccccceeHHHHHHHHHhhhccCC
Q 017290 233 WGDGLQTRSFTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 233 ~~~~~~~~~~i~~~Dva~~i~~~~~~~~ 260 (374)
..-.......++.+|+|+.++.+++++.
T Consensus 226 ~~~~~~~~~~~~pe~vA~~~~~al~~~~ 253 (319)
T 3ioy_A 226 ERLAGVHEFGMEPDVIGARVIEAMKANR 253 (319)
T ss_dssp ---CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred HHHHHhhhcCCCHHHHHHHHHHHHHcCC
Confidence 0000111123799999999999998864
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.83 E-value=9.8e-20 Score=163.50 Aligned_cols=226 Identities=15% Similarity=0.003 Sum_probs=157.5
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
|...++++|||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+..+++
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 445678999999999999999999999999999999986532211 12246788999999988877765
Q ss_pred -CCCEEEEcccccCC-c---ccccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 -GVDHVFNLAADMGG-M---GFIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 -~~d~vi~~a~~~~~-~---~~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+|+.... . +....+.+..+++|+.++..+++++ ++.+..++|++||...+...
T Consensus 104 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~----------- 172 (283)
T 3v8b_A 104 GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF----------- 172 (283)
T ss_dssp SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC-----------
T ss_pred CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC-----------
Confidence 79999999997532 1 1222334567899999999998887 45555699999997654311
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+..+...|+.+|...+.+++.++.+ .++++.+++||.+..+....... ... . . . ...........
T Consensus 173 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~-~--~-~--~~~~~~~~~~~ 240 (283)
T 3v8b_A 173 ----TTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKL--RHE-E--E-T--AIPVEWPKGQV 240 (283)
T ss_dssp ----CSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTB--CCH-H--H-H--SCCCBCTTCSC
T ss_pred ----CCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccccc--ccc-h--h-h--hhhhhhhhhcC
Confidence 1224568999999999999999876 46999999999998775321100 000 0 0 0 00111111111
Q ss_pred cc--ccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 238 QT--RSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 238 ~~--~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
+. ..+...+|+|++++.++... .+.++++.+|.
T Consensus 241 p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 279 (283)
T 3v8b_A 241 PITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQ 279 (283)
T ss_dssp GGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred ccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCc
Confidence 22 45788999999999988653 37778887763
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=7.4e-21 Score=170.40 Aligned_cols=221 Identities=15% Similarity=0.044 Sum_probs=158.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
..++++|||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|+++.+.+..+++
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999999999986532111 12246789999999988877765
Q ss_pred CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|++||+|+...... ....+.+..+++|+.++.++++++.. .+..++|++||...+.
T Consensus 105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--------------- 169 (277)
T 4fc7_A 105 RIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNR--------------- 169 (277)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHH---------------
T ss_pred CCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC---------------
Confidence 7999999999653221 22233456788999999999988742 3345999999976642
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+......|+.+|...+.+.+.++.+. ++++.+++||.+.++.... .............. ..+.
T Consensus 170 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~----------~~p~ 235 (277)
T 4fc7_A 170 --GQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLR--RLGGPQASLSTKVT----------ASPL 235 (277)
T ss_dssp --TCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHH--HHSCCHHHHHHHHH----------TSTT
T ss_pred --CCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhh--hccCCHHHHHHHhc----------cCCC
Confidence 22234689999999999999988764 7999999999998762100 00000111111111 1223
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
..+.+.+|+|++++.++... .+.++++.+|..++
T Consensus 236 ~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~ 273 (277)
T 4fc7_A 236 QRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLT 273 (277)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred CCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCcccC
Confidence 45789999999999998753 37888988876543
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.2e-20 Score=163.26 Aligned_cols=219 Identities=18% Similarity=0.150 Sum_probs=156.6
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
..+++++||||+|.||+++++.|+++|++|++++++...... .....+.++.+|++|.+.+..+++
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG 102 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 456889999999999999999999999999999855432111 112357889999999998877765
Q ss_pred CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|+|||+|+....... ...+.+..+++|+.++.++++++.. .+..++|++||...+.
T Consensus 103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--------------- 167 (269)
T 3gk3_A 103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSR--------------- 167 (269)
T ss_dssp CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH---------------
T ss_pred CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcc---------------
Confidence 79999999997643222 2233455788999999888887643 4445999999976642
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+..+...|+.+|...+.+++.++.+ .++++.+++||.+..+... ........ . .+......
T Consensus 168 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-----~~~~~~~~-----~----~~~~~~~~ 231 (269)
T 3gk3_A 168 --GAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVE-----AVPQDVLE-----A----KILPQIPV 231 (269)
T ss_dssp --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTT-----C------------C----CSGGGCTT
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhh-----hhchhHHH-----H----HhhhcCCc
Confidence 2234468999999999999888765 3799999999999876432 11111100 0 01112234
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
..+.+.+|+|++++.++... .+..+++.+|..++
T Consensus 232 ~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~s 269 (269)
T 3gk3_A 232 GRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGMHMS 269 (269)
T ss_dssp SSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCCC
T ss_pred CCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeCc
Confidence 46789999999999988764 37889999887653
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=5.6e-20 Score=165.55 Aligned_cols=238 Identities=12% Similarity=-0.014 Sum_probs=162.0
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc------------------ccccccceeEEecccchhhH
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM------------------TEDMFCHEFHLVDLRVMDNC 84 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------------~~~~~~i~~~~~dl~~~~~~ 84 (374)
...+|++|||||+|.||+++++.|+++|++|++++|+..... ......+.++.+|++|.+.+
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 346789999999999999999999999999999998732110 00122467889999999988
Q ss_pred hhhcc-------CCCEEEEcccccCCc-ccccCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCccccc
Q 017290 85 LKVTK-------GVDHVFNLAADMGGM-GFIQSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLET 154 (374)
Q Consensus 85 ~~~~~-------~~d~vi~~a~~~~~~-~~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~ 154 (374)
.++++ ++|++||+|+..... .....+.+..+++|+.++.++++++...- ..++|++||...+......
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-- 164 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQP-- 164 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCC--
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccc--
Confidence 77765 799999999975421 12233456679999999999999987642 3489999997766432111
Q ss_pred ccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhcc--CCc
Q 017290 155 NVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTS--TDK 229 (374)
Q Consensus 155 ~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~--~~~ 229 (374)
+..+.. +..+...|+.+|...+.+.+.++.+. ++++.+++||.+..+... . .. ........ ...
T Consensus 165 --~~~~~~--~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~-----~-~~-~~~~~~~~~~~~~ 233 (287)
T 3pxx_A 165 --PGAGGP--QGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLN-----S-AP-MYRQFRPDLEAPS 233 (287)
T ss_dssp --C-------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTS-----S-HH-HHHHHCTTSSSCC
T ss_pred --cccccc--CCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccc-----c-cc-hhhhhccccccch
Confidence 112211 22234679999999999999998765 899999999999987532 1 00 00000000 000
Q ss_pred e-----EeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 230 F-----EMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 230 ~-----~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
. ..........++.+.+|+|++++.++... .+.++++.+|..++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~ 286 (287)
T 3pxx_A 234 RADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK 286 (287)
T ss_dssp HHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred hHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence 0 00001111256899999999999988653 37889998876543
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-20 Score=168.60 Aligned_cols=201 Identities=14% Similarity=0.013 Sum_probs=148.9
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+...+++||||||+|+||+++++.|++.|++|++++|++...... ...++.++.+|++|.+.+.++++
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 345678999999999999999999999999999999986432211 01256889999999988877764
Q ss_pred -CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 -GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|+|||+|+....... ...+.+..+++|+.++..+++++ ++.+..++|++||...+...
T Consensus 107 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------ 174 (272)
T 1yb1_A 107 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV------------ 174 (272)
T ss_dssp CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH------------
T ss_pred CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC------------
Confidence 78999999997542111 12234567889999977776665 44566799999998776421
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhhh------CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCC
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKDF------GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~~------~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
.+...|+.+|...|.+++.++.+. +++++++||+.+.++... . .
T Consensus 175 -----~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~-----~-------------~------- 224 (272)
T 1yb1_A 175 -----PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK-----N-------------P------- 224 (272)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT-----C-------------T-------
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc-----c-------------c-------
Confidence 123579999999999999988764 799999999999876421 0 0
Q ss_pred CcccccceeHHHHHHHHHhhhccCCCCcE
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSDFREPV 264 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~~~~~~ 264 (374)
......+++.+|+|++++.++.++...++
T Consensus 225 ~~~~~~~~~~~dva~~i~~~~~~~~~~~~ 253 (272)
T 1yb1_A 225 STSLGPTLEPEEVVNRLMHGILTEQKMIF 253 (272)
T ss_dssp HHHHCCCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred cccccCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 00123478999999999999987755443
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.8e-20 Score=163.82 Aligned_cols=221 Identities=15% Similarity=0.075 Sum_probs=155.1
Q ss_pred CCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCC-CCccccc------ccccceeEEecccchhhHhhhcc---
Q 017290 20 PYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWK-KNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK--- 89 (374)
Q Consensus 20 ~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~--- 89 (374)
+......++||||||+|+||++++++|+++|++|+++++. ....... ....+.++.+|++|.+.+.++++
T Consensus 7 ~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (256)
T 3ezl_A 7 HHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVK 86 (256)
T ss_dssp ------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHH
Confidence 3445577999999999999999999999999999998844 3321111 12256788999999888877765
Q ss_pred ----CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCC
Q 017290 90 ----GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 90 ----~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
++|++||+|+....... ...+.+..+++|+.++.++++++ ++.+..++|++||...+.
T Consensus 87 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------- 155 (256)
T 3ezl_A 87 AEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK----------- 155 (256)
T ss_dssp HHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGG-----------
T ss_pred HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcc-----------
Confidence 78999999997643222 22334567889999988777665 445556999999976643
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCC
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
+..+...|+.+|...+.+++.++.+ .++++.+++||.+..+... .....+.......
T Consensus 156 ------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-----~~~~~~~~~~~~~--------- 215 (256)
T 3ezl_A 156 ------GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK-----AIRPDVLEKIVAT--------- 215 (256)
T ss_dssp ------SCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-----TSCHHHHHHHHHH---------
T ss_pred ------CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccc-----ccCHHHHHHHHhc---------
Confidence 2234578999999999999888766 4799999999999875321 1122222222211
Q ss_pred CcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
.....+.+.+|+|++++.++... .+.++++.+|..+
T Consensus 216 -~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 216 -IPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGLHM 255 (256)
T ss_dssp -STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred -CCCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence 12335778999999999988643 3788999887654
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=5.1e-20 Score=161.01 Aligned_cols=202 Identities=16% Similarity=0.138 Sum_probs=148.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc---------CCCEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK---------GVDHVF 95 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~---------~~d~vi 95 (374)
++|++|||||+|+||+++++.|+++|++|++++|++..... ...++.+|+++.+.+..+++ ++|+||
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv 77 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF 77 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccc----ccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 45789999999999999999999999999999998765322 24667899999888776664 789999
Q ss_pred EcccccCCcc----cccCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 96 NLAADMGGMG----FIQSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 96 ~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
|+|+...... ....+.+..+++|+.++..+++++...- ..++|++||...+. +..+.
T Consensus 78 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------------~~~~~ 140 (236)
T 1ooe_A 78 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG-----------------PTPSM 140 (236)
T ss_dssp ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------------CCTTB
T ss_pred ECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc-----------------CCCCc
Confidence 9999653211 1223345678899999999999887632 23899999987653 22344
Q ss_pred CchHHhHHHHHHHHHHHHhhh-----CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccccee
Q 017290 170 DAYGLEKLASEELCKHYTKDF-----GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
..|+.+|...+.+++.++.+. ++++++++||.+.++. ...... . .....++.
T Consensus 141 ~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~-------------~~~~~~-~---------~~~~~~~~ 197 (236)
T 1ooe_A 141 IGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-------------NRKWMP-N---------ADHSSWTP 197 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH-------------HHHHST-T---------CCGGGCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc-------------hhhcCC-C---------ccccccCC
Confidence 689999999999999998764 4999999999997641 111111 1 11234678
Q ss_pred HHHHHHHHHhhhccC-----CCCcEEecCCC
Q 017290 245 IDECVEGVLRLTKSD-----FREPVNIGSDE 270 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~-----~~~~~~i~~~~ 270 (374)
.+|+|++++.++..+ .+..+.+.++.
T Consensus 198 ~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~ 228 (236)
T 1ooe_A 198 LSFISEHLLKWTTETSSRPSSGALLKITTEN 228 (236)
T ss_dssp HHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred HHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence 899999998666321 36677776543
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-19 Score=160.20 Aligned_cols=212 Identities=16% Similarity=0.136 Sum_probs=152.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-------cccceeEEecc--cchhhHhhhcc-----
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-------MFCHEFHLVDL--RVMDNCLKVTK----- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~i~~~~~dl--~~~~~~~~~~~----- 89 (374)
..+|++|||||+|.||+++++.|+++|++|++++|+........ ...+.++.+|+ ++.+.+.++++
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999865422111 11467889999 88877766654
Q ss_pred --CCCEEEEcccccCCc-cc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCC
Q 017290 90 --GVDHVFNLAADMGGM-GF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~-~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|++||+|+..... .. ...+.+..+++|+.++..+++++ ++.+..++|++||...+.
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~------------ 157 (252)
T 3f1l_A 90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQ------------ 157 (252)
T ss_dssp CSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTS------------
T ss_pred CCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhcc------------
Confidence 799999999974321 12 22233557899999999998887 455566999999976643
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhhhC--CcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKDFG--IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+......|+.+|...+.+.+.++.+.+ +++..+.||.+..+ +...... ..
T Consensus 158 -----~~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~-------------~~~~~~~----------~~ 209 (252)
T 3f1l_A 158 -----GRANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA-------------MRASAFP----------TE 209 (252)
T ss_dssp -----CCTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH-------------HHHHHCT----------TC
T ss_pred -----CCCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc-------------hhhhhCC----------cc
Confidence 223446899999999999999987754 88889999988643 1122111 11
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccCHH
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSMN 275 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s~~ 275 (374)
....+...+|+|.+++.++..+ .+..+++.+|...++.
T Consensus 210 ~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~ 251 (252)
T 3f1l_A 210 DPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGIS 251 (252)
T ss_dssp CGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC------
T ss_pred chhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence 1234678899999999988754 3788999888776654
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-19 Score=162.86 Aligned_cols=219 Identities=12% Similarity=-0.022 Sum_probs=157.4
Q ss_pred CCCCeEEEEcCcch--hHHHHHHHHHhCCCEEEEEeCCCCc--ccc--cccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGF--IASHIARRLKSEGHYIIASDWKKNE--HMT--EDMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~--~~~--~~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
..+|+||||||+|+ ||+++++.|+++|++|++++|+... ... .....+.++.+|+++.+.+.++++ +
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 103 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG 103 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 45689999999977 9999999999999999999998721 111 111246889999999988877764 6
Q ss_pred CCEEEEcccccCCc----c----cccCCcceehhhhHHHHHHHHHHHHhC---CCCeEEEeecccccCCCcccccccCCC
Q 017290 91 VDHVFNLAADMGGM----G----FIQSNHSVIMYNNTMISFNMLEASRIS---GVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 91 ~d~vi~~a~~~~~~----~----~~~~~~~~~~~~n~~~~~~ll~a~~~~---~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
+|+|||+|+..... . ....+....+++|+.++..+++++... ...++|++||...+.
T Consensus 104 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~------------ 171 (280)
T 3nrc_A 104 LDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEK------------ 171 (280)
T ss_dssp CCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTS------------
T ss_pred CCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccccc------------
Confidence 79999999975421 0 222334557889999999999887643 235999999987653
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
+......|+.+|...+.+++.++.+ .++++.+++||.+..+.... ......+...... .
T Consensus 172 -----~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~~~~~~~~~~~~~-~--------- 233 (280)
T 3nrc_A 172 -----AMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASG---ISNFKKMLDYNAM-V--------- 233 (280)
T ss_dssp -----CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGG---CTTHHHHHHHHHH-H---------
T ss_pred -----CCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhc---CcchHHHHHHHHh-c---------
Confidence 2234568999999999999988765 57999999999998864321 1111222222211 0
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
.....+...+|+|++++.++... .+.++++.+|..+
T Consensus 234 ~p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~~ 273 (280)
T 3nrc_A 234 SPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHC 273 (280)
T ss_dssp STTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCccc
Confidence 11234678999999999998753 3788999877543
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=9.5e-20 Score=163.71 Aligned_cols=224 Identities=16% Similarity=0.037 Sum_probs=155.8
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
...+|++|||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|+++.+.+..+++
T Consensus 26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 34668999999999999999999999999999999986431110 12246788999999888776654
Q ss_pred -CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 90 -GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
++|+|||+|+....... ...+.+..+++|+.++.++++++... +..++|++||...+..
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~--------------- 170 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK--------------- 170 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS---------------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccC---------------
Confidence 78999999997542212 22334567899999999999998765 4569999999765421
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCC-----C-CCCcHHHHHHHHhccCCceEeeC
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWK-----G-MEKAPAAFCRKALTSTDKFEMWG 234 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (374)
...+...|+.+|...+.+++.++.+ .++++.+++||.+.++..... . ...............
T Consensus 171 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 241 (283)
T 1g0o_A 171 -AVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAV-------- 241 (283)
T ss_dssp -SCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHH--------
T ss_pred -CCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhh--------
Confidence 1112568999999999999988765 479999999999987521000 0 000000111111000
Q ss_pred CCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.......+.+.+|+|++++.++... .+..+++.+|.
T Consensus 242 ~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~ 281 (283)
T 1g0o_A 242 QWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA 281 (283)
T ss_dssp HSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred cCCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence 0112235789999999999998753 36778887764
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.4e-19 Score=162.09 Aligned_cols=221 Identities=13% Similarity=-0.029 Sum_probs=159.7
Q ss_pred CCCCCeEEEEcCcc--hhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc------
Q 017290 23 PSEKLRISVTGAGG--FIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 23 ~~~~~~ilItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
...++++|||||+| .||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW 106 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 34578999999998 999999999999999999999985421111 11135788999999998887775
Q ss_pred -CCCEEEEcccccCC-------cccccCCcceehhhhHHHHHHHHHHHHhCCC--CeEEEeecccccCCCcccccccCCC
Q 017290 90 -GVDHVFNLAADMGG-------MGFIQSNHSVIMYNNTMISFNMLEASRISGV--KRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~--~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|++||+|+.... ......+....+++|+.++..+++++...-. .++|++||...+.
T Consensus 107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~------------ 174 (296)
T 3k31_A 107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEK------------ 174 (296)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS------------
T ss_pred CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhcc------------
Confidence 78999999997531 1122234556788999999999999876432 3899999987653
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
+......|+.+|...+.+.+.++.+. ++++.+++||.+..+.... ............. .
T Consensus 175 -----~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~---~~~~~~~~~~~~~-~--------- 236 (296)
T 3k31_A 175 -----VVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSG---ISDFHYILTWNKY-N--------- 236 (296)
T ss_dssp -----CCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCS---CHHHHHHHHHHHH-H---------
T ss_pred -----CCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhc---ccchHHHHHHHHh-c---------
Confidence 22345689999999999999988764 7999999999999874321 0111112222111 1
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
.....+...+|+|++++.++... .+.++++.+|..+.
T Consensus 237 ~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~~ 277 (296)
T 3k31_A 237 SPLRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHVV 277 (296)
T ss_dssp STTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred CCCCCCCCHHHHHHHHHHHcCCccCCccCCEEEECCCcccc
Confidence 11234678999999999998753 37889998876543
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-20 Score=168.37 Aligned_cols=230 Identities=15% Similarity=0.090 Sum_probs=155.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--ccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--DMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
..+|++|||||+|+||+++++.|+++|++|++++|++...... ...++.++.+|++|.+.+..+++ ++|++
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 86 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV 86 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3568999999999999999999999999999999986432211 11136788999999998887765 78999
Q ss_pred EEcccccCCc-cc---ccCCcceehhhhHHHHHHHHHHHHh---CCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 95 FNLAADMGGM-GF---IQSNHSVIMYNNTMISFNMLEASRI---SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 95 i~~a~~~~~~-~~---~~~~~~~~~~~n~~~~~~ll~a~~~---~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
||+|+..... .. ...+.+..+++|+.++.++++++.. .+..++|++||...+. +..
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~-----------------~~~ 149 (270)
T 1yde_A 87 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI-----------------GQA 149 (270)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHH-----------------CCT
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccC-----------------CCC
Confidence 9999965311 11 1223456788999999999888753 1235999999975431 112
Q ss_pred CCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCC-CCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 168 PQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
....|+.+|...+.+.+.++.+ .++++.++|||.++++..... .........+..... ......+.
T Consensus 150 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~----------~~p~~r~~ 219 (270)
T 1yde_A 150 QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGML----------AQPLGRMG 219 (270)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHH----------TSTTSSCB
T ss_pred CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhh----------cCCCCCCc
Confidence 3457999999999999998765 579999999999998631000 000000000110000 01123467
Q ss_pred eHHHHHHHHHhhhccC---CCCcEEecCCCccCHHHHHHH
Q 017290 244 FIDECVEGVLRLTKSD---FREPVNIGSDEMVSMNEMAEI 280 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~---~~~~~~i~~~~~~s~~e~~~~ 280 (374)
..+|+|++++.++... .+..+++.++..+.+......
T Consensus 220 ~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~~~~~~ 259 (270)
T 1yde_A 220 QPAEVGAAAVFLASEANFCTGIELLVTGGAELGYGCKASR 259 (270)
T ss_dssp CHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC------
T ss_pred CHHHHHHHHHHHcccCCCcCCCEEEECCCeecccCcCccc
Confidence 8999999999887643 367899988877765544443
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.83 E-value=6.6e-20 Score=163.34 Aligned_cols=228 Identities=13% Similarity=0.056 Sum_probs=157.9
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhcc---CC
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTK---GV 91 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~---~~ 91 (374)
..++|++|||||+|.||++++++|+++|++|++++|+....... ....+..+.+|+++.+.+.++++ ++
T Consensus 7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 86 (267)
T 3t4x_A 7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV 86 (267)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence 34678999999999999999999999999999999986532211 01245678899999988887775 79
Q ss_pred CEEEEcccccCCcccccC---CcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~~---~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|++||+|+........+. +.+..+++|+.++..+++++ ++.+..++|++||...+.
T Consensus 87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------- 149 (267)
T 3t4x_A 87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIM----------------- 149 (267)
T ss_dssp SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTS-----------------
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhcc-----------------
Confidence 999999997643222222 23445889999977776655 445556999999987653
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCC------CCCCCcHHHHHHHHhccCCceEeeCC
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTW------KGMEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
+..+...|+.+|...+.+.+.++.+. ++++..++||.+..+.... ..............+... ..
T Consensus 150 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 223 (267)
T 3t4x_A 150 PSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKEN------RP 223 (267)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHH------CT
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhcc------CC
Confidence 22345789999999999999998764 5889999999987652000 000000011111111100 01
Q ss_pred CcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
......+.+.+|+|++++.++... .+.++++.+|...+
T Consensus 224 ~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s 265 (267)
T 3t4x_A 224 TSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS 265 (267)
T ss_dssp TCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred cccccCccCHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence 112346889999999999988753 37889998876654
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.2e-19 Score=160.15 Aligned_cols=217 Identities=17% Similarity=0.084 Sum_probs=156.1
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc-----
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
+...+|++|||||+|.||+++++.|+++|++|++++++....... ....+.++.+|++|.+.+.++++
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 345678999999999999999999999999999997765321110 12246788999999998887775
Q ss_pred --CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 --GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|++||+|+....... ...+.+..+++|+.++..+++++... ...++|++||......
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~-------------- 172 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV-------------- 172 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC--------------
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC--------------
Confidence 79999999997543222 22334567889999999999988754 2349999998643211
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+..+...|+.+|...+.+.+.++.+. ++++.+++||.+..+..... ..... .... . ...
T Consensus 173 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~--~~~~~----~~~~-~---------~~~ 234 (271)
T 3v2g_A 173 --PWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPAD--GDHAE----AQRE-R---------IAT 234 (271)
T ss_dssp --CSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSS--CSSHH----HHHH-T---------CTT
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCccccc--chhHH----HHHh-c---------CCC
Confidence 12345789999999999999888764 79999999999998753211 11111 1111 1 112
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
..+...+|+|++++.++... .+..+++.+|.
T Consensus 235 ~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~ 269 (271)
T 3v2g_A 235 GSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGA 269 (271)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence 34678999999999988543 37788887764
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.9e-19 Score=160.33 Aligned_cols=220 Identities=13% Similarity=-0.033 Sum_probs=157.9
Q ss_pred CCCCCeEEEEcCcch--hHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc----
Q 017290 23 PSEKLRISVTGAGGF--IASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK---- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~---- 89 (374)
...++++|||||+|+ ||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 346789999999999 99999999999999999999885321111 11157889999999998887764
Q ss_pred ---CCCEEEEcccccCC----cc---cccCCcceehhhhHHHHHHHHHHHHhCCC--CeEEEeecccccCCCcccccccC
Q 017290 90 ---GVDHVFNLAADMGG----MG---FIQSNHSVIMYNNTMISFNMLEASRISGV--KRFFYASSACIYPEFKQLETNVS 157 (374)
Q Consensus 90 ---~~d~vi~~a~~~~~----~~---~~~~~~~~~~~~n~~~~~~ll~a~~~~~~--~~~i~~Ss~~vy~~~~~~~~~~~ 157 (374)
++|++||+|+.... .. ....+....+++|+.++..+++++...-. .++|++||...+.
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~---------- 153 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL---------- 153 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS----------
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccc----------
Confidence 78999999997531 11 11223345678999999999998876532 3899999977653
Q ss_pred CCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeC
Q 017290 158 LKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWG 234 (374)
Q Consensus 158 ~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (374)
+......|+.+|...+.+++.++.+. ++++.+++||.+..+..... .............
T Consensus 154 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~~-------- 215 (266)
T 3oig_A 154 -------VMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGI---SDFNSILKDIEER-------- 215 (266)
T ss_dssp -------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC---TTHHHHHHHHHHH--------
T ss_pred -------cCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc---cchHHHHHHHHhc--------
Confidence 22245689999999999999887653 79999999999987642211 1112222222110
Q ss_pred CCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
.....+.+.+|+|++++.++..+ .+.++++.+|...
T Consensus 216 --~~~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~~ 255 (266)
T 3oig_A 216 --APLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHI 255 (266)
T ss_dssp --STTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred --CCCCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeEE
Confidence 11234678999999999998753 3778888876543
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=158.29 Aligned_cols=195 Identities=14% Similarity=0.042 Sum_probs=140.4
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhccC----CCEEEEcc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTKG----VDHVFNLA 98 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~~----~d~vi~~a 98 (374)
||+||||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|+++.+.+.++++. .|+|||+|
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A 80 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA 80 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence 57899999999999999999999999999999986542211 123567899999999999888764 39999999
Q ss_pred cccCCccccc---CCcceehhhhHHHHHHHHHHHHhCCC---CeEEEeecccccCCCcccccccCCCCCCCCCCCCCCch
Q 017290 99 ADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRISGV---KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAY 172 (374)
Q Consensus 99 ~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~~~~---~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y 172 (374)
+........+ .+.+..+++|+.++..+++++...-. .++|++||...+. +......|
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~-----------------~~~~~~~Y 143 (230)
T 3guy_A 81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQ-----------------PKAQESTY 143 (230)
T ss_dssp CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTS-----------------CCTTCHHH
T ss_pred CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCC-----------------CCCCCchh
Confidence 9754222222 23455688999999999888754321 2899999987653 22345689
Q ss_pred HHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHH
Q 017290 173 GLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249 (374)
Q Consensus 173 ~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 249 (374)
+.+|...+.+.+.++.+. ++++..++||.+..+... .. . .......+.+.+|+|
T Consensus 144 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-------------~~---~-------~~~~~~~~~~~~dvA 200 (230)
T 3guy_A 144 CAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWE-------------TS---G-------KSLDTSSFMSAEDAA 200 (230)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC---------------------------------------CCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHH-------------hc---C-------CCCCcccCCCHHHHH
Confidence 999999999999998764 699999999998765211 00 0 011234678999999
Q ss_pred HHHHhhhccCC
Q 017290 250 EGVLRLTKSDF 260 (374)
Q Consensus 250 ~~i~~~~~~~~ 260 (374)
++++.++.++.
T Consensus 201 ~~i~~l~~~~~ 211 (230)
T 3guy_A 201 LMIHGALANIG 211 (230)
T ss_dssp HHHHHHCCEET
T ss_pred HHHHHHHhCcC
Confidence 99999987654
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.6e-19 Score=159.45 Aligned_cols=212 Identities=16% Similarity=0.084 Sum_probs=154.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
++++||||||+|+||++++++|+++|++|+++.++...... .....+.++.+|++|.+.+.++++ +
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 104 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA 104 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 56789999999999999999999999999876654322111 112356889999999998887775 7
Q ss_pred CCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH-----hCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 91 VDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR-----ISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~-----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
+|+|||+|+....... ...+.+..+++|+.++.++++++. +.+..++|++||...+.
T Consensus 105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--------------- 169 (267)
T 4iiu_A 105 WYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM--------------- 169 (267)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH---------------
T ss_pred ccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc---------------
Confidence 9999999997643222 223445678899999999988763 44556999999976542
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+..+...|+.+|...+.+.+.++.+. ++++.+++||.+..+.... . ......... . ...
T Consensus 170 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~-~~~~~~~~~-~---------~p~ 231 (267)
T 4iiu_A 170 --GNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEM-----E-ESALKEAMS-M---------IPM 231 (267)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCC-----C-HHHHHHHHH-T---------CTT
T ss_pred --CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccc-----c-HHHHHHHHh-c---------CCC
Confidence 22345689999999988888887654 7999999999998875321 1 233333222 1 122
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
..+.+.+|+|++++.++... .++++++.+|
T Consensus 232 ~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG 265 (267)
T 4iiu_A 232 KRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG 265 (267)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence 35788999999999988753 3778888765
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=161.36 Aligned_cols=197 Identities=17% Similarity=0.060 Sum_probs=142.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
..+++||||||+|+||++++++|+++|++|++++|+....... ....+.++.+|+++.+.+..+++ +
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 106 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR 106 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 4568999999999999999999999999999999986542211 12356888999999998877764 6
Q ss_pred CCEEEEcccccCC-c---ccccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 91 VDHVFNLAADMGG-M---GFIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 91 ~d~vi~~a~~~~~-~---~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
+|+|||+|+.... . .....+.+..+++|+.++..+++++. +.+..++|++||...+.
T Consensus 107 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--------------- 171 (262)
T 3rkr_A 107 CDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN--------------- 171 (262)
T ss_dssp CSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSC---------------
T ss_pred CCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcC---------------
Confidence 8999999997321 1 12223345578899999988888764 35566999999987653
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+..+...|+.+|...+.+++.++.+ .++++.+++||.+..+... ... .....
T Consensus 172 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~-------------~~~----------~~~~~ 226 (262)
T 3rkr_A 172 --PVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGV-------------GLS----------AKKSA 226 (262)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------------
T ss_pred --CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccc-------------ccc----------ccccc
Confidence 2234578999999999999988765 5799999999998765311 000 00122
Q ss_pred ccceeHHHHHHHHHhhhccCC
Q 017290 240 RSFTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~~ 260 (374)
..++..+|+|++++.++..+.
T Consensus 227 ~~~~~p~dvA~~v~~l~s~~~ 247 (262)
T 3rkr_A 227 LGAIEPDDIADVVALLATQAD 247 (262)
T ss_dssp --CCCHHHHHHHHHHHHTCCT
T ss_pred ccCCCHHHHHHHHHHHhcCcc
Confidence 346799999999999987753
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=4.5e-20 Score=164.72 Aligned_cols=229 Identities=13% Similarity=-0.038 Sum_probs=161.4
Q ss_pred CCCCCCCeEEEEcCc--chhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc----
Q 017290 21 YWPSEKLRISVTGAG--GFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK---- 89 (374)
Q Consensus 21 ~~~~~~~~ilItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~---- 89 (374)
......|+||||||+ |.||+++++.|+++|++|++++|+....... ....+.++.+|+++.+.+..+++
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 345578999999999 9999999999999999999999984321111 11246789999999998887765
Q ss_pred ---CCCEEEEcccccCCc----c----cccCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCccccccc
Q 017290 90 ---GVDHVFNLAADMGGM----G----FIQSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNV 156 (374)
Q Consensus 90 ---~~d~vi~~a~~~~~~----~----~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~ 156 (374)
++|++||+|+..... . ....+....+++|+.++..+++++...- ..++|++||...+.
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~--------- 159 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER--------- 159 (271)
T ss_dssp HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTS---------
T ss_pred HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccccc---------
Confidence 689999999975420 0 2223345578899999999999887642 23899999987653
Q ss_pred CCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEee
Q 017290 157 SLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMW 233 (374)
Q Consensus 157 ~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (374)
+......|+.+|...+.+++.++.+. ++++.+++||.+..+.... ......+...... .
T Consensus 160 --------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~~~~~~~~~~~~~-~------ 221 (271)
T 3ek2_A 160 --------AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASG---IKSFGKILDFVES-N------ 221 (271)
T ss_dssp --------BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CC---CHHHHHHHHHHHH-H------
T ss_pred --------CCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhc---ccchHHHHHHHHh-c------
Confidence 22345789999999999999988654 7999999999998764321 0111122222211 1
Q ss_pred CCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccCHHHHHH
Q 017290 234 GDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSMNEMAE 279 (374)
Q Consensus 234 ~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s~~e~~~ 279 (374)
.....+...+|+|++++.++... .+..+++.+|..+++.++++
T Consensus 222 ---~~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~ 268 (271)
T 3ek2_A 222 ---SPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG 268 (271)
T ss_dssp ---STTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred ---CCcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence 12234678999999999998753 47889999988777665543
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=160.94 Aligned_cols=217 Identities=14% Similarity=0.018 Sum_probs=156.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
+.+|+++||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++ ++|+
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~ 83 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 83 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 3568999999999999999999999999999999986432211 01246788999999988877764 5799
Q ss_pred EEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 94 VFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 94 vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
+||+|+........+ .+.+..+++|+.++..+++++...- ..++|++||...+ ... .
T Consensus 84 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~-----------------~ 145 (263)
T 2a4k_A 84 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAF-----------------G 145 (263)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHH-----------------H
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCC-----------------C
Confidence 999999754221222 2335568899999999999886642 3499999998776 211 2
Q ss_pred CCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeH
Q 017290 169 QDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
...|+.+|...+.+.+.++.+ .++++++++||.+.++.... ........... .. ....+.+.
T Consensus 146 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----~~~~~~~~~~~-~~---------p~~~~~~p 210 (263)
T 2a4k_A 146 LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG-----LPPWAWEQEVG-AS---------PLGRAGRP 210 (263)
T ss_dssp HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT-----SCHHHHHHHHH-TS---------TTCSCBCH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh-----cCHHHHHHHHh-cC---------CCCCCcCH
Confidence 357999999999998888765 47999999999998874221 11122222111 11 12347899
Q ss_pred HHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 246 DECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 246 ~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
+|+|++++.++..+ .+..+++.++..+.
T Consensus 211 ~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~~ 242 (263)
T 2a4k_A 211 EEVAQAALFLLSEESAYITGQALYVDGGRSIV 242 (263)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTTTTC
T ss_pred HHHHHHHHHHhCccccCCcCCEEEECCCcccc
Confidence 99999999988653 36788888776543
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.82 E-value=3e-19 Score=157.62 Aligned_cols=205 Identities=10% Similarity=0.054 Sum_probs=139.6
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc------cccceeEEecccchhhHhhhcc------C
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED------MFCHEFHLVDLRVMDNCLKVTK------G 90 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~i~~~~~dl~~~~~~~~~~~------~ 90 (374)
...++++|||||+|.||+++++.|+++|++|++++|+........ ...+.++.+|++|.+.+..+++ +
T Consensus 4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAP 83 (252)
T ss_dssp -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence 346789999999999999999999999999999999876432211 2256889999999998888775 6
Q ss_pred CCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+|++||+||....... ...+.+..+++|+.++..+++++ ++.+..++|++||...+.
T Consensus 84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------- 147 (252)
T 3h7a_A 84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLR---------------- 147 (252)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTC----------------
T ss_pred ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcC----------------
Confidence 8999999997543222 22234557889999998888776 344545999999976643
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcE-EEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIEC-RVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~-~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+......|+.+|...+.+.+.++.+ .++++ .++.||.+..+... ........ ......+.
T Consensus 148 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~-----~~~~~~~~----------~~~~~~~~ 211 (252)
T 3h7a_A 148 -GGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVR-----ERREQMFG----------KDALANPD 211 (252)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------------------
T ss_pred -CCCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhh-----ccchhhhh----------hhhhcCCc
Confidence 2234568999999999999988766 36888 78999988765321 01111100 01111122
Q ss_pred ccceeHHHHHHHHHhhhccCC
Q 017290 240 RSFTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~~ 260 (374)
. +.+.+|+|++++.++..+.
T Consensus 212 ~-~~~pedvA~~~~~l~s~~~ 231 (252)
T 3h7a_A 212 L-LMPPAAVAGAYWQLYQQPK 231 (252)
T ss_dssp ---CCHHHHHHHHHHHHHCCG
T ss_pred c-CCCHHHHHHHHHHHHhCch
Confidence 3 8899999999999998653
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.2e-19 Score=157.43 Aligned_cols=202 Identities=16% Similarity=0.156 Sum_probs=149.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc---------CCCEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK---------GVDHVF 95 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~---------~~d~vi 95 (374)
++|++|||||+|+||+++++.|+++|++|++++|++..... ...++.+|+++.+.+.++++ ++|++|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv 81 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAIL 81 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS----EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC----CcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 56899999999999999999999999999999998765321 24677899999888877664 789999
Q ss_pred EcccccCCcc----cccCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 96 NLAADMGGMG----FIQSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 96 ~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
|+|+...... ....+.+..+++|+.++..+++++...- ..++|++||...+.. ..+.
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~~~ 144 (241)
T 1dhr_A 82 CVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG-----------------TPGM 144 (241)
T ss_dssp ECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------------CTTB
T ss_pred EcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC-----------------CCCc
Confidence 9999653211 1222345568899999999999886531 148999999876532 2234
Q ss_pred CchHHhHHHHHHHHHHHHhhh-----CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccccee
Q 017290 170 DAYGLEKLASEELCKHYTKDF-----GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
..|+.+|...+.+++.++.+. ++++++++||.+-.+ +...... . .....++.
T Consensus 145 ~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~-------------~~~~~~~-~---------~~~~~~~~ 201 (241)
T 1dhr_A 145 IGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP-------------MNRKSMP-E---------ADFSSWTP 201 (241)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH-------------HHHHHST-T---------SCGGGSEE
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc-------------cccccCc-c---------hhhccCCC
Confidence 689999999999999998653 599999999988643 1111111 1 11234678
Q ss_pred HHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 245 IDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.+|+|++++.++... .++.+.+.++.
T Consensus 202 ~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~ 231 (241)
T 1dhr_A 202 LEFLVETFHDWITGNKRPNSGSLIQVVTTD 231 (241)
T ss_dssp HHHHHHHHHHHHTTTTCCCTTCEEEEEEET
T ss_pred HHHHHHHHHHHhcCCCcCccceEEEEeCCC
Confidence 899999999988754 26667776543
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.1e-19 Score=159.19 Aligned_cols=227 Identities=17% Similarity=0.057 Sum_probs=157.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc----------------------ccccccceeEEecccch
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM----------------------TEDMFCHEFHLVDLRVM 81 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------------------~~~~~~i~~~~~dl~~~ 81 (374)
..+|++|||||+|.||+++++.|+++|++|++++|+..... ......+.++.+|++|.
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 88 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY 88 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence 35789999999999999999999999999999998732110 00112467889999999
Q ss_pred hhHhhhcc-------CCCEEEEcccccCCcc-c---ccCCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccc
Q 017290 82 DNCLKVTK-------GVDHVFNLAADMGGMG-F---IQSNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACI 145 (374)
Q Consensus 82 ~~~~~~~~-------~~d~vi~~a~~~~~~~-~---~~~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~v 145 (374)
+.+.++++ ++|++||+|+...... . ...+.+..+++|+.++..+++++.. .+ ..++|++||...
T Consensus 89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 168 (286)
T 3uve_A 89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG 168 (286)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhh
Confidence 98887765 7999999999754221 1 2233456789999999999887643 22 348999999876
Q ss_pred cCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHH
Q 017290 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRK 222 (374)
Q Consensus 146 y~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~ 222 (374)
+. +......|+.+|...+.+.+.++.+ .++++.+++||.+..+.... ......+..
T Consensus 169 ~~-----------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----~~~~~~~~~ 227 (286)
T 3uve_A 169 LK-----------------AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHN----EGTFKMFRP 227 (286)
T ss_dssp TS-----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSS----HHHHHHHCT
T ss_pred cc-----------------CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccc----cchhhhccc
Confidence 53 2234468999999999999998776 57999999999998874321 000000000
Q ss_pred HhccCCc-----eEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 223 ALTSTDK-----FEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 223 ~~~~~~~-----~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
....... ........+ ..+.+.+|+|.+++.++... .+..+++.+|..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l 285 (286)
T 3uve_A 228 DLENPGPDDMAPICQMFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285 (286)
T ss_dssp TSSSCCHHHHHHHHHTTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred cccccchhhHHHHHHhhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence 0000000 000011112 46789999999999988654 3788999887654
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.7e-20 Score=162.31 Aligned_cols=216 Identities=17% Similarity=0.093 Sum_probs=155.2
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
..+|++|||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++ ++|+
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 83 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI 83 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 3568999999999999999999999999999999986532221 12246788899999998887775 7999
Q ss_pred EEEcccccCCccccc---CCcceehhhhHHHHHHHHHH----HHhCC-CCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 94 VFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEA----SRISG-VKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 94 vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a----~~~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
+||+|+......+.+ .+.+..+++|+.++.+++++ +++.+ ..++|++||...+. +
T Consensus 84 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------------~ 146 (247)
T 3rwb_A 84 LVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA-----------------G 146 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH-----------------T
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc-----------------C
Confidence 999999764322222 23455788999999988887 44444 45999999976643 2
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccc
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (374)
......|+.+|...+.+.+.++.+ .++++.+++||.+..+..... .......+.... .....+
T Consensus 147 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~-------------~~~~r~ 212 (247)
T 3rwb_A 147 TPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKAS-PHNEAFGFVEML-------------QAMKGK 212 (247)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS-GGGGGHHHHHHH-------------SSSCSC
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCcccccc-ChhHHHHHHhcc-------------cccCCC
Confidence 234568999999999999988876 579999999999986531100 000111111100 112346
Q ss_pred eeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 243 TFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
...+|+|++++.++... .+.++++.+|.
T Consensus 213 ~~pedva~~v~~L~s~~~~~itG~~i~vdGG~ 244 (247)
T 3rwb_A 213 GQPEHIADVVSFLASDDARWITGQTLNVDAGM 244 (247)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred cCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 78999999999988654 37788888764
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.82 E-value=8.3e-20 Score=163.95 Aligned_cols=219 Identities=14% Similarity=0.091 Sum_probs=156.2
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhcc------CCCEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTK------GVDHV 94 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~------~~d~v 94 (374)
..++++|||||+|.||+++++.|+++|++|++++|+........ ...+.++.+|+++.+.+.++++ ++|++
T Consensus 28 l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l 107 (281)
T 3ppi_A 28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA 107 (281)
T ss_dssp GTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence 35678999999999999999999999999999999865422211 2256889999999998887765 68999
Q ss_pred EEcccccCCcc---------cccCCcceehhhhHHHHHHHHHHHHh----------CCCCeEEEeecccccCCCcccccc
Q 017290 95 FNLAADMGGMG---------FIQSNHSVIMYNNTMISFNMLEASRI----------SGVKRFFYASSACIYPEFKQLETN 155 (374)
Q Consensus 95 i~~a~~~~~~~---------~~~~~~~~~~~~n~~~~~~ll~a~~~----------~~~~~~i~~Ss~~vy~~~~~~~~~ 155 (374)
||+++...... ....+....+++|+.++.++++++.. .+..++|++||...+.
T Consensus 108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------- 179 (281)
T 3ppi_A 108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE-------- 179 (281)
T ss_dssp EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS--------
T ss_pred EEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC--------
Confidence 99944332111 11112356788999999999887753 1233899999987753
Q ss_pred cCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEe
Q 017290 156 VSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEM 232 (374)
Q Consensus 156 ~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (374)
+......|+.+|...+.+++.++.+. ++++.+++||.+..+... ............ .. ++
T Consensus 180 ---------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-----~~~~~~~~~~~~-~~--~~ 242 (281)
T 3ppi_A 180 ---------GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIME-----SVGEEALAKFAA-NI--PF 242 (281)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-----TTCHHHHHHHHH-TC--CS
T ss_pred ---------CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhh-----cccHHHHHHHHh-cC--CC
Confidence 22345689999999999998887664 799999999999765211 111122222221 11 00
Q ss_pred eCCCcccccceeHHHHHHHHHhhhccC--CCCcEEecCCCccC
Q 017290 233 WGDGLQTRSFTFIDECVEGVLRLTKSD--FREPVNIGSDEMVS 273 (374)
Q Consensus 233 ~~~~~~~~~~i~~~Dva~~i~~~~~~~--~~~~~~i~~~~~~s 273 (374)
...+.+.+|+|++++.++... .+.++++.++..++
T Consensus 243 ------~~~~~~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~ 279 (281)
T 3ppi_A 243 ------PKRLGTPDEFADAAAFLLTNGYINGEVMRLDGAQRFT 279 (281)
T ss_dssp ------SSSCBCHHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred ------CCCCCCHHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence 145789999999999999865 47889998887654
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=8.4e-20 Score=163.18 Aligned_cols=205 Identities=16% Similarity=0.068 Sum_probs=147.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHh-CCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKS-EGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
.+++||||||+|+||+++++.|++ .|++|++++|+....... ....+.++.+|+++.+.+..+++ +
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 568999999999999999999999 999999999985432111 01246789999999988887776 8
Q ss_pred CCEEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHHHhCCC--CeEEEeecccccCCCccc-c------cccCC
Q 017290 91 VDHVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASRISGV--KRFFYASSACIYPEFKQL-E------TNVSL 158 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~~~~~--~~~i~~Ss~~vy~~~~~~-~------~~~~~ 158 (374)
+|+|||+|+........ ..+.+..+++|+.++.++++++...-. .++|++||...+...... + ....+
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T 1wma_A 83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI 162 (276)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccccc
Confidence 99999999975421110 123456788999999999999987532 399999997776321000 0 00011
Q ss_pred CCCC-----------------CCCCCCCCchHHhHHHHHHHHHHHHhh-------hCCcEEEEeeCcccCCCCCCCCCCC
Q 017290 159 KESD-----------------AWPAEPQDAYGLEKLASEELCKHYTKD-------FGIECRVGRFHNIYGPFGTWKGMEK 214 (374)
Q Consensus 159 ~e~~-----------------~~~~~~~~~y~~sK~~~E~~~~~~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~ 214 (374)
+|++ ..+..|...|+.+|...|.+++.++.+ .++++++++||.+..+...
T Consensus 163 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~------ 236 (276)
T 1wma_A 163 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG------ 236 (276)
T ss_dssp CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC------
T ss_pred chhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCC------
Confidence 1111 002234589999999999999888765 4899999999999875321
Q ss_pred cHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC
Q 017290 215 APAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD 259 (374)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~ 259 (374)
. ..+.+.+|+|++++.++..+
T Consensus 237 ------------~------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 237 ------------P------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp ------------T------------TCSBCHHHHTHHHHHHHSCC
T ss_pred ------------c------------cccCChhHhhhhHhhhhcCc
Confidence 0 13679999999999988644
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.81 E-value=5.5e-19 Score=159.93 Aligned_cols=226 Identities=17% Similarity=0.039 Sum_probs=156.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcc--------c----------ccccccceeEEecccchhhHh
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH--------M----------TEDMFCHEFHLVDLRVMDNCL 85 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~----------~~~~~~i~~~~~dl~~~~~~~ 85 (374)
..++++|||||+|.||+++++.|++.|++|++++|++... . ......+.++.+|++|.+.+.
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 105 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ 105 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 4678999999999999999999999999999999874211 0 001124678899999999888
Q ss_pred hhcc-------CCCEEEEcccccCCcc----cccCCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccccCCC
Q 017290 86 KVTK-------GVDHVFNLAADMGGMG----FIQSNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACIYPEF 149 (374)
Q Consensus 86 ~~~~-------~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~vy~~~ 149 (374)
.+++ ++|++||+|+...... ....+.+..+++|+.++..+++++.. .+ ..++|++||...+.
T Consensus 106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~-- 183 (299)
T 3t7c_A 106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR-- 183 (299)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS--
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc--
Confidence 7765 7999999999754221 12233456789999999999887643 22 45899999987653
Q ss_pred cccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhcc
Q 017290 150 KQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTS 226 (374)
Q Consensus 150 ~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~ 226 (374)
+......|+.+|...+.+.+.++.+. ++++.+++||.+..+.... ......+.....
T Consensus 184 ---------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----~~~~~~~~~~~~- 243 (299)
T 3t7c_A 184 ---------------GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLN----EPTYRMFRPDLE- 243 (299)
T ss_dssp ---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS----HHHHHHHCTTSS-
T ss_pred ---------------CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccc----cchhhhhhhhhc-
Confidence 22345689999999999999988764 7999999999999875310 000000000000
Q ss_pred CCceE------eeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 227 TDKFE------MWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 227 ~~~~~------~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
..... ....... .++...+|+|++++.++... .+.++++.+|..+
T Consensus 244 ~~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l 298 (299)
T 3t7c_A 244 NPTVEDFQVASRQMHVLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL 298 (299)
T ss_dssp SCCHHHHHHHHHHHSSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred cchhhHHHHHhhhhcccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence 00000 0001111 35789999999999998654 3788999887654
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-18 Score=156.33 Aligned_cols=225 Identities=18% Similarity=0.098 Sum_probs=155.2
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcc----------c---------ccccccceeEEecccchhhH
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH----------M---------TEDMFCHEFHLVDLRVMDNC 84 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~---------~~~~~~i~~~~~dl~~~~~~ 84 (374)
..++++|||||+|.||+++++.|+++|++|++++|+.... . ......+.++.+|++|.+.+
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 88 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL 88 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 4568999999999999999999999999999999853210 0 00112467888999999988
Q ss_pred hhhcc-------CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH----hCC-CCeEEEeecccccCCC
Q 017290 85 LKVTK-------GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISG-VKRFFYASSACIYPEF 149 (374)
Q Consensus 85 ~~~~~-------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~-~~~~i~~Ss~~vy~~~ 149 (374)
.++++ ++|++||+|+......+ ...+.+..+++|+.++..+++++. +.+ ..++|++||...+..
T Consensus 89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~- 167 (277)
T 3tsc_A 89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM- 167 (277)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC-
Confidence 87764 69999999997643222 223345678999999998888753 333 348999999876532
Q ss_pred cccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhcc
Q 017290 150 KQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTS 226 (374)
Q Consensus 150 ~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~ 226 (374)
......|+.+|...+.+.+.++.+. ++++.+++||.+..+... ..............
T Consensus 168 ----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~----~~~~~~~~~~~~~~ 227 (277)
T 3tsc_A 168 ----------------QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGS----GDMVTAVGQAMETN 227 (277)
T ss_dssp ----------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGS----HHHHHHHHHHHHTC
T ss_pred ----------------CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCccc----chhhhhhhhccccc
Confidence 2234689999999999999988764 799999999999876421 00111111111111
Q ss_pred CCceEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 227 TDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 227 ~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
...........+ ..+.+.+|+|++++.++..+ .+..+++.+|.
T Consensus 228 ~~~~~~~~~~~p-~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 274 (277)
T 3tsc_A 228 PQLSHVLTPFLP-DWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS 274 (277)
T ss_dssp GGGTTTTCCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHhhhccC-CCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence 111111111112 25889999999999988654 37788888764
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-19 Score=160.70 Aligned_cols=217 Identities=16% Similarity=0.043 Sum_probs=149.5
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc-----
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
|+..++++|||||+|.||+++++.|+++|++|+++.++....... ....+.++.+|+++.+.+.++++
T Consensus 23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 444568899999999999999999999999999886554321111 12246788999999998887765
Q ss_pred --CCCEEEEcccccCCcccccC---CcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 --GVDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~~~~~~---~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|++||+||........+. +.+..+++|+.++.++++++...- ..++|++||...+..
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------- 168 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLL-------------- 168 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHC--------------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccC--------------
Confidence 78999999997643222222 234567799999999998876532 238999999766431
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
......|+.+|...+.+.+.++.+. ++++.+++||.+..+.... ......... + ....+.
T Consensus 169 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----~~~~~~~~~-~---------~~~~p~ 231 (267)
T 3u5t_A 169 ---HPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLE----GKSDEVRDR-F---------AKLAPL 231 (267)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC---------------CHHH-H---------HTSSTT
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccc----cCCHHHHHH-H---------HhcCCC
Confidence 2234689999999999999998774 7999999999998663210 000011111 1 112233
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
..+...+|+|++++.++... .+..+++.+|
T Consensus 232 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 265 (267)
T 3u5t_A 232 ERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGG 265 (267)
T ss_dssp CSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred CCCcCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence 46789999999999988654 3677777765
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.81 E-value=8.2e-19 Score=156.47 Aligned_cols=222 Identities=12% Similarity=0.008 Sum_probs=156.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
..+|++|||||+|.||++++++|+++|++|++++++....... ....+.++.+|++|.+.+.++++
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 95 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG 95 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999999988765321110 12346788999999998887765
Q ss_pred CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhCCCC--eEEEeecccccCCCcccccccCCCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRISGVK--RFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~~~~--~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
++|++||+|+....... ...+.+..+++|+.++..+++++...-.+ ++|++||......
T Consensus 96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------- 159 (270)
T 3is3_A 96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDF---------------- 159 (270)
T ss_dssp CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTC----------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccC----------------
Confidence 78999999997643222 22334567899999999999988765433 9999999753110
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCC-----C-CCCcHHHHHHHHhccCCceEeeCC
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWK-----G-MEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
+..+...|+.+|...+.+.+.++.+ .++++..++||.+..+..... . .............. .
T Consensus 160 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 230 (270)
T 3is3_A 160 SVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAA---------H 230 (270)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHH---------H
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHH---------h
Confidence 2234578999999999999998876 479999999999987631100 0 00000111111111 1
Q ss_pred CcccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
..+...+.+.+|+|++++.++... .+..+++.+|.
T Consensus 231 ~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 269 (270)
T 3is3_A 231 ASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA 269 (270)
T ss_dssp HSTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred cCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence 112345788999999999988653 37778887763
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4e-19 Score=160.31 Aligned_cols=220 Identities=13% Similarity=-0.066 Sum_probs=156.3
Q ss_pred CCCCCeEEEEcCcch--hHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc------
Q 017290 23 PSEKLRISVTGAGGF--IASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
...+|++|||||+|+ ||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+..+++
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 346789999999998 99999999999999999999884311100 11246788999999998887765
Q ss_pred -CCCEEEEcccccCC----c---ccccCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCC
Q 017290 90 -GVDHVFNLAADMGG----M---GFIQSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 -~~d~vi~~a~~~~~----~---~~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|++||+|+.... . .....+....+++|+.++..+++++...- ..++|++||...+..
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~----------- 176 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV----------- 176 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB-----------
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC-----------
Confidence 78999999997531 1 12223445678899999999999887633 238999999876532
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
......|+.+|...+.+.+.++.+ .++++.+++||.+..+..... ............ .
T Consensus 177 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~-~--------- 237 (293)
T 3grk_A 177 ------MPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGI---GDFRYILKWNEY-N--------- 237 (293)
T ss_dssp ------CTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---------CCHHHHHHHHHH-H---------
T ss_pred ------CCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcc---cchHHHHHHHHh-c---------
Confidence 223468999999999999998866 479999999999988642211 111122222111 0
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
.....+...+|+|++++.++... .+..+++.+|..+
T Consensus 238 ~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 277 (293)
T 3grk_A 238 APLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHV 277 (293)
T ss_dssp STTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCCCCCHHHHHHHHHHHcCccccCCcceEEEECCCccc
Confidence 12234678999999999988753 3788898877543
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-18 Score=152.09 Aligned_cols=196 Identities=18% Similarity=0.055 Sum_probs=144.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc-------C
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
+|+++|||||+|+||++++++|+++|++|++++|+....... ....+.++.+|++|.+.+.++++ +
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 368899999999999999999999999999999986532211 12356788999999999888876 7
Q ss_pred CCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhC---CCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRIS---GVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~---~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
+|++||+|+....... ...+.+..+++|+.++.++++++... +..++|++||...+.
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~----------------- 143 (235)
T 3l77_A 81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSAR----------------- 143 (235)
T ss_dssp CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS-----------------
T ss_pred CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcc-----------------
Confidence 8999999997542222 22334567889999999998887532 223677777755432
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh-hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD-FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
+......|+.+|...+.+++.+..+ .++++.+++||.+..+.... . ........++
T Consensus 144 ~~~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~----------------------~-~~~~~~~~~~ 200 (235)
T 3l77_A 144 LIPYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGS----------------------K-PGKPKEKGYL 200 (235)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTC----------------------C-SCCCGGGTCB
T ss_pred cCCCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccc----------------------c-CCcccccCCC
Confidence 1123468999999999999988543 47999999999997653210 0 0011223678
Q ss_pred eHHHHHHHHHhhhccCC
Q 017290 244 FIDECVEGVLRLTKSDF 260 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~~ 260 (374)
..+|+|++++.++..+.
T Consensus 201 ~p~dva~~v~~l~~~~~ 217 (235)
T 3l77_A 201 KPDEIAEAVRCLLKLPK 217 (235)
T ss_dssp CHHHHHHHHHHHHTSCT
T ss_pred CHHHHHHHHHHHHcCCC
Confidence 99999999999998763
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.4e-19 Score=159.52 Aligned_cols=225 Identities=10% Similarity=-0.032 Sum_probs=156.5
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhcc----
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTK---- 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~---- 89 (374)
+...++++|||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+..+++
T Consensus 4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER 83 (265)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 445678999999999999999999999999999999986532211 11136788899999888877664
Q ss_pred ---CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCC
Q 017290 90 ---GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 ---~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|++||+|+...... ....+.+..+++|+.++..+++++.. .+..++|++||...+.
T Consensus 84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------ 151 (265)
T 3lf2_A 84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQ------------ 151 (265)
T ss_dssp HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTS------------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCC------------
Confidence 7899999999754222 22233456788999999999988743 3344899999976653
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCC----C-CCCcHHHHHHHHhccCCceE
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWK----G-MEKAPAAFCRKALTSTDKFE 231 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~----~-~~~~~~~~~~~~~~~~~~~~ 231 (374)
+......|+.+|...+.+.+.++.+. ++++.+++||.+..+..... . .......+.. .+...
T Consensus 152 -----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~---- 221 (265)
T 3lf2_A 152 -----PEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTA-QLARN---- 221 (265)
T ss_dssp -----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHH-HHHHH----
T ss_pred -----CCCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHH-HHhhc----
Confidence 22234689999999999999888664 79999999999986521000 0 0000001111 11000
Q ss_pred eeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 232 MWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 232 ~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
...+...+...+|+|++++.++... .+..+++.+|..
T Consensus 222 ---~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~ 262 (265)
T 3lf2_A 222 ---KQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS 262 (265)
T ss_dssp ---TTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred ---cCCCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence 0012345789999999999988753 367888887654
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.6e-19 Score=158.57 Aligned_cols=218 Identities=11% Similarity=-0.048 Sum_probs=155.0
Q ss_pred CCCCeEEEEcCc--chhHHHHHHHHHhCCCEEEEEeCCCCc---ccccc--cccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAG--GFIASHIARRLKSEGHYIIASDWKKNE---HMTED--MFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~--~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
+.+|++|||||+ |+||+++++.|+++|++|++++|+... ..... ...+.++.+|+++.+.+..+++
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 356899999999 999999999999999999999998741 00000 1136788999999988877765
Q ss_pred CCCEEEEcccccCC----c---ccccCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCC
Q 017290 90 GVDHVFNLAADMGG----M---GFIQSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 ~~d~vi~~a~~~~~----~---~~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+|+.... . .....+.+..+++|+.++..+++++...- ..++|++||...+.
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------------- 150 (275)
T 2pd4_A 84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK------------- 150 (275)
T ss_dssp CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-------------
T ss_pred CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcC-------------
Confidence 68999999997531 1 12223345678899999999999987651 14899999976542
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+..+...|+.+|...+.+.+.++.+. ++++.+++||.+.++.... ......+...... ..
T Consensus 151 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~~~~~~~~~~~~~-~~--------- 213 (275)
T 2pd4_A 151 ----YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSG---IADFRMILKWNEI-NA--------- 213 (275)
T ss_dssp ----BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGG---STTHHHHHHHHHH-HS---------
T ss_pred ----CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhh---ccccHHHHHHHHh-cC---------
Confidence 11234679999999999999988765 8999999999998874211 0111222222211 00
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
....+.+.+|+|++++.++... .+..+++.++..
T Consensus 214 p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~~ 251 (275)
T 2pd4_A 214 PLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYH 251 (275)
T ss_dssp TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CcCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 1124678999999999988643 366788877643
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=9.3e-19 Score=160.38 Aligned_cols=215 Identities=15% Similarity=0.051 Sum_probs=154.6
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEe-CCCCccccc-------ccccceeEEecccchh-------------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASD-WKKNEHMTE-------DMFCHEFHLVDLRVMD------------- 82 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~-------~~~~i~~~~~dl~~~~------------- 82 (374)
+.++++|||||+|+||+++++.|+++|++|++++ |+....... ....+.++.+|+++.+
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 123 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 123 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence 4568999999999999999999999999999999 875432111 1124678899999988
Q ss_pred ----hHhhhcc-------CCCEEEEcccccCCcccc-----------------cCCcceehhhhHHHHHHHHHHHH----
Q 017290 83 ----NCLKVTK-------GVDHVFNLAADMGGMGFI-----------------QSNHSVIMYNNTMISFNMLEASR---- 130 (374)
Q Consensus 83 ----~~~~~~~-------~~d~vi~~a~~~~~~~~~-----------------~~~~~~~~~~n~~~~~~ll~a~~---- 130 (374)
.+.++++ ++|+|||+|+........ ..+.+..+++|+.++..+++++.
T Consensus 124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 203 (328)
T 2qhx_A 124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 203 (328)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777665 799999999975322111 22234568899999988888765
Q ss_pred hCC------CCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCc
Q 017290 131 ISG------VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHN 201 (374)
Q Consensus 131 ~~~------~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~ 201 (374)
+.+ ..+||++||...+. +......|+.+|...+.+.+.++.+. ++.+.+++||.
T Consensus 204 ~~~~~~~~~~g~IV~isS~~~~~-----------------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~ 266 (328)
T 2qhx_A 204 GTPAKHRGTNYSIINMVDAMTNQ-----------------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 266 (328)
T ss_dssp HSCGGGSCSCEEEEEECCTTTTS-----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred hcCCcCCCCCcEEEEECchhhcc-----------------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCc
Confidence 334 45999999987653 22344689999999999999987664 79999999999
Q ss_pred ccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc-cceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 202 IYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR-SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 202 v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
+..+. . ........... .. ... .+...+|+|++++.++... .+..+++.++..+
T Consensus 267 v~T~~-~------~~~~~~~~~~~-~~---------p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 325 (328)
T 2qhx_A 267 SVLVD-D------MPPAVWEGHRS-KV---------PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 325 (328)
T ss_dssp BSCCC-C------SCHHHHHHHHT-TC---------TTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ccCCc-c------ccHHHHHHHHh-hC---------CCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence 98875 2 11222222221 11 112 4678999999999998643 3678888876543
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-19 Score=161.94 Aligned_cols=201 Identities=14% Similarity=0.078 Sum_probs=146.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-------cccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-------MFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
..+++||||||+|+||+++++.|+++|++|++++|+........ ...+.++.+|++|.+.+.++++
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 45689999999999999999999999999999999865322111 1246788999999888877664
Q ss_pred CCCEEEEc-ccccCCcccc---cCCcceehhhhHHHHHHHHHHHHhC---CCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNL-AADMGGMGFI---QSNHSVIMYNNTMISFNMLEASRIS---GVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~-a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~~~---~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|+|||+ ++.... ... ..+....+++|+.++.++++++... +..++|++||...+.
T Consensus 106 ~iD~li~naag~~~~-~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~--------------- 169 (286)
T 1xu9_A 106 GLDMLILNHITNTSL-NLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV--------------- 169 (286)
T ss_dssp SCSEEEECCCCCCCC-CCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTS---------------
T ss_pred CCCEEEECCccCCCC-ccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCccccc---------------
Confidence 79999999 554321 111 1223456889999999988877432 235999999987653
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhh-----CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDF-----GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+..+...|+.+|...+.+++.++.+. ++++++++||.+..+. ...... +.
T Consensus 170 --~~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~-------------~~~~~~----------~~ 224 (286)
T 1xu9_A 170 --AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET-------------AMKAVS----------GI 224 (286)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH-------------HHHHSC----------GG
T ss_pred --CCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh-------------HHHhcc----------cc
Confidence 22345689999999999998887654 7999999999987541 111111 11
Q ss_pred ccccceeHHHHHHHHHhhhccCCCCcEE
Q 017290 238 QTRSFTFIDECVEGVLRLTKSDFREPVN 265 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~~~~~~~ 265 (374)
....+++.+|+|+.++.+++.+..++|.
T Consensus 225 ~~~~~~~~~~vA~~i~~~~~~~~~~~~~ 252 (286)
T 1xu9_A 225 VHMQAAPKEECALEIIKGGALRQEEVYY 252 (286)
T ss_dssp GGGGCBCHHHHHHHHHHHHHTTCSEEEE
T ss_pred ccCCCCCHHHHHHHHHHHHhcCCceEEe
Confidence 2345789999999999999877655543
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=162.01 Aligned_cols=218 Identities=15% Similarity=0.032 Sum_probs=154.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------CC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------GV 91 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------~~ 91 (374)
..++++|||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|+++.+.+..+++ ++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i 110 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV 110 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 4678999999999999999999999999999999987653321 12356788999999988877765 78
Q ss_pred CEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|++||+|+........+ .+.+..+++|+.++..+++++ ++.+..++|++||...+.
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~----------------- 173 (275)
T 4imr_A 111 DILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR----------------- 173 (275)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------------
Confidence 99999999754322222 234556889999999998876 334555999999987653
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
+..+...|+.+|...+.+.+.++.+. ++++.+++||.+..+.... ............... . .....
T Consensus 174 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~---~------~p~~r 242 (275)
T 4imr_A 174 PKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNAD--RRAQDPEGWDEYVRT---L------NWMGR 242 (275)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHH--HHHHCHHHHHHHHHH---H------STTCS
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCccccc--ccccChHHHHHHHhh---c------CccCC
Confidence 22234579999999999999988764 7999999999998652100 000000111111110 0 01224
Q ss_pred ceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 242 FTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
+...+|+|++++.++... .+.++++.+|
T Consensus 243 ~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 274 (275)
T 4imr_A 243 AGRPEEMVGAALFLASEACSFMTGETIFLTGG 274 (275)
T ss_dssp CBCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred CcCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence 677899999999988754 3677888765
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.7e-18 Score=154.31 Aligned_cols=203 Identities=10% Similarity=-0.014 Sum_probs=148.7
Q ss_pred CCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------------ccccceeEEecccchhhHhhh
Q 017290 21 YWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------------DMFCHEFHLVDLRVMDNCLKV 87 (374)
Q Consensus 21 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------~~~~i~~~~~dl~~~~~~~~~ 87 (374)
.|...++++|||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++
T Consensus 4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 83 (285)
T 3sc4_A 4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA 83 (285)
T ss_dssp --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 3556779999999999999999999999999999999987642221 122567889999999988877
Q ss_pred cc-------CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhC----CCCeEEEeecccccCCCcccc
Q 017290 88 TK-------GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRIS----GVKRFFYASSACIYPEFKQLE 153 (374)
Q Consensus 88 ~~-------~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~----~~~~~i~~Ss~~vy~~~~~~~ 153 (374)
++ ++|++||+|+....... ...+.+..+++|+.++..+++++... +..++|++||...+...
T Consensus 84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---- 159 (285)
T 3sc4_A 84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK---- 159 (285)
T ss_dssp HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG----
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC----
Confidence 65 89999999997642222 22234556779999999999987653 44599999997654321
Q ss_pred cccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCce
Q 017290 154 TNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKF 230 (374)
Q Consensus 154 ~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (374)
..+...|+.+|...+.+++.++.+ .++++.+++||.+... .+........
T Consensus 160 ------------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t------------~~~~~~~~~~--- 212 (285)
T 3sc4_A 160 ------------WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT------------AAVQNLLGGD--- 212 (285)
T ss_dssp ------------GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC------------HHHHHHHTSC---
T ss_pred ------------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc------------HHHHhhcccc---
Confidence 123468999999999999998876 5799999999854321 2223322211
Q ss_pred EeeCCCcccccceeHHHHHHHHHhhhccCC
Q 017290 231 EMWGDGLQTRSFTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 231 ~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~ 260 (374)
.....+...+|+|++++.++..+.
T Consensus 213 ------~~~~r~~~pedvA~~~~~l~s~~~ 236 (285)
T 3sc4_A 213 ------EAMARSRKPEVYADAAYVVLNKPS 236 (285)
T ss_dssp ------CCCTTCBCTHHHHHHHHHHHTSCT
T ss_pred ------ccccCCCCHHHHHHHHHHHhCCcc
Confidence 122356788999999999998764
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-19 Score=160.11 Aligned_cols=222 Identities=10% Similarity=0.043 Sum_probs=151.3
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc---------cccccceeEEecccchhhHhhhcc---
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT---------EDMFCHEFHLVDLRVMDNCLKVTK--- 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------~~~~~i~~~~~dl~~~~~~~~~~~--- 89 (374)
+...++++|||||+|.||+++++.|+++|++|++++|....... .....+.++.+|++|.+.+..+++
T Consensus 7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 86 (262)
T 3ksu_A 7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE 86 (262)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 44567899999999999999999999999999999876432111 012356788999999998887775
Q ss_pred ----CCCEEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 ----GVDHVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 ----~~d~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+|+........ ..+.+..+++|+.++..+++++... +..++|++||...+...
T Consensus 87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~----------- 155 (262)
T 3ksu_A 87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYT----------- 155 (262)
T ss_dssp HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHH-----------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCC-----------
Confidence 789999999976432222 2234556889999999999998764 23489999997765321
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
.....|+.+|...+.+.+.++.+. ++++.+++||.+..+.. ... .............
T Consensus 156 ------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~-------------~~~-~~~~~~~~~~~~~ 215 (262)
T 3ksu_A 156 ------GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFF-------------YGQ-ETKESTAFHKSQA 215 (262)
T ss_dssp ------CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHH-------------HTC-C------------
T ss_pred ------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccc-------------ccc-CchHHHHHHHhcC
Confidence 234579999999999999998774 79999999999865421 000 0000011111222
Q ss_pred ccccceeHHHHHHHHHhhhccC---CCCcEEecCCCccCH
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD---FREPVNIGSDEMVSM 274 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~---~~~~~~i~~~~~~s~ 274 (374)
....+...+|+|++++.++... .+..+++.++.....
T Consensus 216 ~~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg~~~~~ 255 (262)
T 3ksu_A 216 MGNQLTKIEDIAPIIKFLTTDGWWINGQTIFANGGYTTRE 255 (262)
T ss_dssp CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTTCCCC-
T ss_pred cccCCCCHHHHHHHHHHHcCCCCCccCCEEEECCCccCCC
Confidence 3345788999999999988752 367888887655443
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.81 E-value=4e-19 Score=157.67 Aligned_cols=203 Identities=12% Similarity=0.030 Sum_probs=141.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
++|++|||||+|.||+++++.|++.|++|++++|+....... ....+.++.+|++|.+.+..+++ ++
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 568999999999999999999999999999999986532211 12246778899999988877764 79
Q ss_pred CEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|++||+||....... ...+.+..+++|+.++..+++++. +.+..++|++||...+..
T Consensus 83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~---------------- 146 (264)
T 3tfo_A 83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSV---------------- 146 (264)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC----------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHccc----------------
Confidence 999999997543222 223345568899999988877663 345559999999876532
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhh-CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDF-GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
......|+.+|...+.+.+.++.+. ++++.+++||.+..+.... +.. ........ .....+.
T Consensus 147 -~~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~---------~~~-----~~~~~~~~--~~~~~~~ 209 (264)
T 3tfo_A 147 -VPTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGT---------ITH-----EETMAAMD--TYRAIAL 209 (264)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC---------------------------------------CC
T ss_pred -CCCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccc---------ccc-----hhHHHHHH--hhhccCC
Confidence 2234689999999999999988765 7999999999997653210 000 00000000 0111247
Q ss_pred eHHHHHHHHHhhhccCC
Q 017290 244 FIDECVEGVLRLTKSDF 260 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~~ 260 (374)
..+|+|++++.++..+.
T Consensus 210 ~pedvA~~v~~l~s~~~ 226 (264)
T 3tfo_A 210 QPADIARAVRQVIEAPQ 226 (264)
T ss_dssp CHHHHHHHHHHHHHSCT
T ss_pred CHHHHHHHHHHHhcCCc
Confidence 89999999999998874
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.4e-19 Score=157.61 Aligned_cols=207 Identities=14% Similarity=0.090 Sum_probs=131.3
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-ccccceeEEecccchhh---Hhhhc---cCCCEEE
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-DMFCHEFHLVDLRVMDN---CLKVT---KGVDHVF 95 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~i~~~~~dl~~~~~---~~~~~---~~~d~vi 95 (374)
..+++++|||||+|+||+++++.|++ |+.|++++|++...... ...++.++.+|+.+.+. +.+.+ .++|+||
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv 80 (245)
T 3e9n_A 2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLV 80 (245)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEE
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEE
Confidence 34678999999999999999999987 99999999986542221 12356788899987643 22222 3799999
Q ss_pred EcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 96 NLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 96 ~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
|+|+....... ...+.+..+++|+.++..+++++. +.+ .++|++||...+.. ...
T Consensus 81 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~-----------------~~~ 142 (245)
T 3e9n_A 81 HAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGP-----------------HPG 142 (245)
T ss_dssp ECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC---------------------------
T ss_pred ECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccC-----------------CCC
Confidence 99997542211 222345568899999877777653 334 58999999877642 224
Q ss_pred CCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeH
Q 017290 169 QDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
...|+.+|...+.+++.++.+ .++++.+++||.+.++... .+.... ........+++.
T Consensus 143 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~---------~~~~~~----------~~~~~~~~~~~p 203 (245)
T 3e9n_A 143 NTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQ---------GLMDSQ----------GTNFRPEIYIEP 203 (245)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------------CCGGGSCH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhh---------hhhhhh----------hcccccccCCCH
Confidence 568999999999999998875 5799999999999876321 111000 111123457899
Q ss_pred HHHHHHHHhhhccCC-CCcEEec
Q 017290 246 DECVEGVLRLTKSDF-REPVNIG 267 (374)
Q Consensus 246 ~Dva~~i~~~~~~~~-~~~~~i~ 267 (374)
+|+|++++.+++.+. +.++++.
T Consensus 204 ~dvA~~i~~l~~~~~~~~~~~i~ 226 (245)
T 3e9n_A 204 KEIANAIRFVIDAGETTQITNVD 226 (245)
T ss_dssp HHHHHHHHHHHTSCTTEEEEEEE
T ss_pred HHHHHHHHHHHcCCCccceeeeE
Confidence 999999999998874 5666664
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.2e-19 Score=158.67 Aligned_cols=218 Identities=10% Similarity=-0.043 Sum_probs=152.0
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhcc-------CCCE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
+|++|||||+|.||+++++.|++.| +.|++++|+........ ...+.++.+|++|.+.+.++++ ++|+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 81 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS 81 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence 4889999999999999999999984 78998998865322211 2356788999999998887765 7899
Q ss_pred EEEcccccCC-c---ccccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 94 VFNLAADMGG-M---GFIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 94 vi~~a~~~~~-~---~~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
+||+|+.... . .....+.+..+++|+.++..+++++ ++.+ .++|++||...+. +
T Consensus 82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~-----------------~ 143 (254)
T 3kzv_A 82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNM-----------------Y 143 (254)
T ss_dssp EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCC-----------------S
T ss_pred EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhcc-----------------C
Confidence 9999997432 1 1122334557889999999998887 4445 5999999987653 2
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhhh-CCcEEEEeeCcccCCCCCCCCCC----CcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKDF-GIECRVGRFHNIYGPFGTWKGME----KAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~v~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
..+...|+.+|...+.+.+.++.+. ++++..++||.+..+........ ............ ..+..
T Consensus 144 ~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 213 (254)
T 3kzv_A 144 FSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRG----------LKENN 213 (254)
T ss_dssp SCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHH----------HHTTC
T ss_pred CCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHH----------HHhcC
Confidence 2345689999999999999998764 79999999999988753211100 001122221111 01223
Q ss_pred cceeHHHHHHHHHhhhccC-----CCCcEEecCCCc
Q 017290 241 SFTFIDECVEGVLRLTKSD-----FREPVNIGSDEM 271 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~-----~~~~~~i~~~~~ 271 (374)
.+.+.+|+|++++.++... .+..+++.+++.
T Consensus 214 r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~~ 249 (254)
T 3kzv_A 214 QLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPAL 249 (254)
T ss_dssp ----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGGG
T ss_pred CcCCcccHHHHHHHHHhhcccCCCCccEEEecCccc
Confidence 5778899999999988654 266777776543
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-18 Score=157.34 Aligned_cols=224 Identities=15% Similarity=0.100 Sum_probs=155.4
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc--------c----------cccccceeEEecccchhhHh
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM--------T----------EDMFCHEFHLVDLRVMDNCL 85 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~----------~~~~~i~~~~~dl~~~~~~~ 85 (374)
..+|++|||||+|.||+++++.|+++|++|++++|+..... . .....+.++.+|++|.+.+.
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 123 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ 123 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 45689999999999999999999999999999988632210 0 01124678899999999888
Q ss_pred hhcc-------CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHHh----CC-CCeEEEeecccccCCCc
Q 017290 86 KVTK-------GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRI----SG-VKRFFYASSACIYPEFK 150 (374)
Q Consensus 86 ~~~~-------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~i~~Ss~~vy~~~~ 150 (374)
++++ ++|++||+|+...... ....+.+..+++|+.++..+++++.. .+ ..++|++||...+..
T Consensus 124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~-- 201 (317)
T 3oec_A 124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG-- 201 (317)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC--
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC--
Confidence 7765 7999999999764322 22233456788999999998887743 33 348999999876532
Q ss_pred ccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhcc-
Q 017290 151 QLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTS- 226 (374)
Q Consensus 151 ~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~- 226 (374)
......|+.+|...+.+.+.++.+ .++++.+++||.+.++.... ..+.......
T Consensus 202 ---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-------~~~~~~~~~~~ 259 (317)
T 3oec_A 202 ---------------APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALN-------EKLLKMFLPHL 259 (317)
T ss_dssp ---------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHC-------HHHHHHHCTTC
T ss_pred ---------------CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccc-------hhhhhhhhhhc
Confidence 223468999999999999999876 47999999999998763100 0000100000
Q ss_pred -CCc----eEee-CCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 227 -TDK----FEMW-GDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 227 -~~~----~~~~-~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
... ...+ .......++++.+|+|++++.++... .+.++++.+|..
T Consensus 260 ~~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~ 314 (317)
T 3oec_A 260 ENPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL 314 (317)
T ss_dssp SSCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred cccchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence 000 0000 00111256889999999999988653 378899987754
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.1e-19 Score=160.30 Aligned_cols=204 Identities=16% Similarity=0.096 Sum_probs=140.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhcc-------CCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
..++++|||||+|.||+++++.|+++|++|++++|+........ ...+.++.+|++|.+.+.++++ ++|+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 105 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV 105 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 35688999999999999999999999999999999865422211 1356889999999998888775 8999
Q ss_pred EEEcccccCC-c---ccccCCcceehhhhHHHHHHHHHHHH----hCC--CCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 94 VFNLAADMGG-M---GFIQSNHSVIMYNNTMISFNMLEASR----ISG--VKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 94 vi~~a~~~~~-~---~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
+||+||.... . +....+.+..+++|+.++..+++++. +.+ ..++|++||...+.
T Consensus 106 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~---------------- 169 (272)
T 4dyv_A 106 LFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS---------------- 169 (272)
T ss_dssp EEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS----------------
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC----------------
Confidence 9999997532 1 12223345678899999888877664 333 24899999987653
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
+..+...|+.+|...+.+.+.++.+ .++++.+++||.+..+... .+...... . .......
T Consensus 170 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~---------~~~~~~~~------~-~~~~~~~ 232 (272)
T 4dyv_A 170 -PRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQ---------KMKAGVPQ------A-DLSIKVE 232 (272)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-------------------------------------
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhh---------hhcccchh------h-hhccccc
Confidence 2234568999999999999998766 4799999999999876321 00000000 0 0111234
Q ss_pred cceeHHHHHHHHHhhhccCC
Q 017290 241 SFTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~~ 260 (374)
++.+.+|+|++++.++..+.
T Consensus 233 ~~~~pedvA~~v~fL~s~~~ 252 (272)
T 4dyv_A 233 PVMDVAHVASAVVYMASLPL 252 (272)
T ss_dssp ---CHHHHHHHHHHHHHSCT
T ss_pred CCCCHHHHHHHHHHHhCCCC
Confidence 57899999999999998763
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.80 E-value=7.5e-19 Score=158.27 Aligned_cols=215 Identities=14% Similarity=0.095 Sum_probs=152.3
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC-Ccccc-------cccccceeEEecccc----hhhHhhhcc-
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK-NEHMT-------EDMFCHEFHLVDLRV----MDNCLKVTK- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~-------~~~~~i~~~~~dl~~----~~~~~~~~~- 89 (374)
.+.+|++|||||+|+||+++++.|+++|++|++++|+. ..... .....+.++.+|+++ .+.+..+++
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 99 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS 99 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH
Confidence 34678999999999999999999999999999999987 32111 011246788999999 887776664
Q ss_pred ------CCCEEEEcccccCCccc-------------ccCCcceehhhhHHHHHHHHHHHHhC----C------CCeEEEe
Q 017290 90 ------GVDHVFNLAADMGGMGF-------------IQSNHSVIMYNNTMISFNMLEASRIS----G------VKRFFYA 140 (374)
Q Consensus 90 ------~~d~vi~~a~~~~~~~~-------------~~~~~~~~~~~n~~~~~~ll~a~~~~----~------~~~~i~~ 140 (374)
++|+|||+|+....... ...+.+..+++|+.++..+++++... + ..++|++
T Consensus 100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~i 179 (288)
T 2x9g_A 100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL 179 (288)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEE
T ss_pred HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence 79999999997542111 11223456889999999998877542 2 3489999
Q ss_pred ecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHH
Q 017290 141 SSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPA 217 (374)
Q Consensus 141 Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~ 217 (374)
||...+. +..+...|+.+|...+.+.+.++.+. ++++.+++||.++++. . . . .
T Consensus 180 sS~~~~~-----------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~----~-~ 235 (288)
T 2x9g_A 180 CDAMVDQ-----------------PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M----G-E 235 (288)
T ss_dssp CCTTTTS-----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S----C-H
T ss_pred ecccccC-----------------CCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c----C-h
Confidence 9987653 22345689999999999998887664 7999999999999875 2 1 1 1
Q ss_pred HHHHHHhccCCceEeeCCCcccccc-eeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 218 AFCRKALTSTDKFEMWGDGLQTRSF-TFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
........ .. ....+ ...+|+|++++.++... .+..+++.++..
T Consensus 236 ~~~~~~~~-~~---------p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~ 284 (288)
T 2x9g_A 236 EEKDKWRR-KV---------PLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284 (288)
T ss_dssp HHHHHHHH-TC---------TTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHh-hC---------CCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence 11222211 11 11235 78999999999998753 367778877644
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.3e-19 Score=155.67 Aligned_cols=209 Identities=14% Similarity=0.056 Sum_probs=144.5
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhcc-------CCCEEEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTK-------GVDHVFN 96 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi~ 96 (374)
|++|||||+|+||+++++.|+++|++|++++|+........ ...+.++.+|++|.+.+.++++ ++|++||
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn 80 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN 80 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 57999999999999999999999999999999864322111 1246788999999998887764 6899999
Q ss_pred cccccC-Cc---ccccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 97 LAADMG-GM---GFIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 97 ~a~~~~-~~---~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
+||... .. .....+.+..+++|+.++..+++++. +.+..++|++||...+. +..+
T Consensus 81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------------~~~~ 143 (248)
T 3asu_A 81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----------------PYAG 143 (248)
T ss_dssp CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------------CCTT
T ss_pred CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhcc-----------------CCCC
Confidence 999642 11 12223345678899999888888765 44556999999987643 2233
Q ss_pred CCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccC-CCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccccee
Q 017290 169 QDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYG-PFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
...|+.+|...+.+.+.++.+ .++++.+++||.+.| +... ...... ..... ... ....+++
T Consensus 144 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~-----~~~~~~-~~~~~-----~~~----~~~~~~~ 208 (248)
T 3asu_A 144 GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSN-----VRFKGD-DGKAE-----KTY----QNTVALT 208 (248)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-------------------------------------CCBC
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchh-----hcccCc-hHHHH-----HHH----hccCCCC
Confidence 468999999999999998865 379999999999984 4211 000000 00000 000 0123468
Q ss_pred HHHHHHHHHhhhccCC---CCcEEec
Q 017290 245 IDECVEGVLRLTKSDF---REPVNIG 267 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~~---~~~~~i~ 267 (374)
.+|+|++++.++..+. +..+.+.
T Consensus 209 p~dvA~~v~~l~s~~~~~~g~~i~v~ 234 (248)
T 3asu_A 209 PEDVSEAVWWVSTLPAHVNINTLEMM 234 (248)
T ss_dssp HHHHHHHHHHHHHSCTTCCCCEEEEC
T ss_pred HHHHHHHHHHHhcCCccceeeEEEEc
Confidence 9999999999987642 4445544
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=2.7e-19 Score=156.25 Aligned_cols=194 Identities=12% Similarity=0.020 Sum_probs=141.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
++|++|||||+|.||+++++.|+++|++|++++|+........ ..++.++.+|++|.+.+..+++ ++|++
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 81 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV 81 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence 4689999999999999999999999999999999865422111 1247889999999988877764 68999
Q ss_pred EEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 95 FNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 95 i~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
||+||...... ....+.+..+++|+.++..+++++.. .+. ++|++||...+.. ..
T Consensus 82 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~~-----------------~~ 143 (235)
T 3l6e_A 82 LHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGG-VLANVLSSAAQVG-----------------KA 143 (235)
T ss_dssp EEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCE-EEEEECCEECCSS-----------------CS
T ss_pred EECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC-EEEEEeCHHhcCC-----------------CC
Confidence 99999753211 22334556789999999888887743 232 8999999765432 12
Q ss_pred CCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccccee
Q 017290 168 PQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
....|+.+|...+.+.+.++.+ .++++.+++||.+..+... .. . . .....++.
T Consensus 144 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~---------~~-----~-~---------~~~~~~~~ 199 (235)
T 3l6e_A 144 NESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWD---------NT-----D-H---------VDPSGFMT 199 (235)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----------------------------------CBC
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchh---------cc-----C-C---------CCCcCCCC
Confidence 3468999999999999999875 3699999999998765311 00 0 0 01125789
Q ss_pred HHHHHHHHHhhhccCC
Q 017290 245 IDECVEGVLRLTKSDF 260 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~~ 260 (374)
.+|+|++++.++.++.
T Consensus 200 pedvA~~v~~l~~~~~ 215 (235)
T 3l6e_A 200 PEDAAAYMLDALEARS 215 (235)
T ss_dssp HHHHHHHHHHHTCCCS
T ss_pred HHHHHHHHHHHHhCCC
Confidence 9999999999998654
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.9e-19 Score=155.56 Aligned_cols=197 Identities=18% Similarity=0.123 Sum_probs=144.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---------ccccceeEEecccchhhHhhhcc-----
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---------DMFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
.+++++|||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|+++.+.+.++++
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 4668999999999999999999999999999999986532211 11356788999999888877764
Q ss_pred --CCCEEEEcccccCCccc--ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 --GVDHVFNLAADMGGMGF--IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~~~--~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|++||+||....... ...+.+..+++|+.++..+++++ ++.+..++|++||...+.
T Consensus 85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-------------- 150 (250)
T 3nyw_A 85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKY-------------- 150 (250)
T ss_dssp HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------------------
T ss_pred cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcC--------------
Confidence 78999999997542212 22234567889999998888876 334556999999976542
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
+..+...|+.+|...+.+.+.++.+. ++++.+++||.+..+ +..... . ...
T Consensus 151 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~-------------~~~~~~---~-------~~~ 204 (250)
T 3nyw_A 151 ---GFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD-------------MAKKAG---T-------PFK 204 (250)
T ss_dssp -----CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH-------------HHHHTT---C-------CSC
T ss_pred ---CCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc-------------hhhhcC---C-------Ccc
Confidence 12235789999999999999887664 799999999998753 111111 1 112
Q ss_pred cccceeHHHHHHHHHhhhccCC
Q 017290 239 TRSFTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~~ 260 (374)
...+++.+|+|++++.++..+.
T Consensus 205 ~~~~~~p~dva~~v~~l~s~~~ 226 (250)
T 3nyw_A 205 DEEMIQPDDLLNTIRCLLNLSE 226 (250)
T ss_dssp GGGSBCHHHHHHHHHHHHTSCT
T ss_pred cccCCCHHHHHHHHHHHHcCCC
Confidence 3458899999999999998653
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=153.64 Aligned_cols=204 Identities=14% Similarity=0.024 Sum_probs=145.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
++|++|||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++ ++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 85 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL 85 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 568999999999999999999999999999999986432211 01246788999999988877764 79
Q ss_pred CEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 92 d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
|++||+|+....... ...+.+..+++|+.++..+++++. +.+ .++|++||...+..
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~---------------- 148 (247)
T 2jah_A 86 DILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVN---------------- 148 (247)
T ss_dssp SEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCC----------------
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCC----------------
Confidence 999999997532212 222345568899999999888764 344 69999999766431
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (374)
......|+.+|...+.+.+.++.+ .++++.+++||.+..+..... . . .. ....... .+ ..+.
T Consensus 149 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--~-~-~~-~~~~~~~-----~~----~~~~ 213 (247)
T 2jah_A 149 -VRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHI--T-H-TA-TKEMYEQ-----RI----SQIR 213 (247)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGC--C-C-HH-HHHHHHH-----HT----TTSC
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcc--c-c-hh-hHHHHHh-----cc----cccC
Confidence 223468999999999999888765 479999999999987642110 0 0 11 1111110 00 0112
Q ss_pred ceeHHHHHHHHHhhhccCC
Q 017290 242 FTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 242 ~i~~~Dva~~i~~~~~~~~ 260 (374)
+++.+|+|++++.++..+.
T Consensus 214 ~~~pedvA~~v~~l~s~~~ 232 (247)
T 2jah_A 214 KLQAQDIAEAVRYAVTAPH 232 (247)
T ss_dssp CBCHHHHHHHHHHHHHSCT
T ss_pred CCCHHHHHHHHHHHhCCCc
Confidence 5899999999999987653
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=156.88 Aligned_cols=215 Identities=11% Similarity=0.064 Sum_probs=154.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC---EEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhcc----
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH---YIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTK---- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~---- 89 (374)
.+|++|||||+|.||+++++.|+++|+ .|++++|+....... ....+.++.+|++|.+.+.++++
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 568999999999999999999999987 999999986542211 12356788999999998887765
Q ss_pred ---CCCEEEEcccccCCc----ccccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCC
Q 017290 90 ---GVDHVFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 90 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
++|++||+||..... .....+.+..+++|+.++..+++++ ++.+..++|++||...+.
T Consensus 112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~----------- 180 (287)
T 3rku_A 112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRD----------- 180 (287)
T ss_dssp GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------
T ss_pred hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcC-----------
Confidence 689999999965311 1223345667899999999998887 445556999999976643
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCC
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
+......|+.+|...+.+.+.++.+ .++++.+++||.+..+..... ..... ........
T Consensus 181 ------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~~~~-~~~~~~~~---------- 242 (287)
T 3rku_A 181 ------AYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVR-YRGNE-EQAKNVYK---------- 242 (287)
T ss_dssp ------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHH-TTTCH-HHHHHHHT----------
T ss_pred ------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccccc-ccCcH-HHHHHhhc----------
Confidence 2234568999999999999999877 579999999999986521000 00000 11111111
Q ss_pred CcccccceeHHHHHHHHHhhhccCC----CCcEEecCCCc
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSDF----REPVNIGSDEM 271 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~~----~~~~~i~~~~~ 271 (374)
....+..+|+|++++.++..+. ++++.+.+++.
T Consensus 243 ---~~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~ 279 (287)
T 3rku_A 243 ---DTTPLMADDVADLIVYATSRKQNTVIADTLIFPTNQA 279 (287)
T ss_dssp ---TSCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred ---ccCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCCC
Confidence 1123489999999999998764 56777776654
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=4.7e-19 Score=157.34 Aligned_cols=165 Identities=20% Similarity=0.146 Sum_probs=125.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
..+|++|||||+|+||+++++.|+++|++|++++|+....... ....+.++.+|+++.+.+..+++ +
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK 84 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 3568999999999999999999999999999999986432211 11246788999999988776664 7
Q ss_pred CCEEEEccccc-CCcc---cccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 91 VDHVFNLAADM-GGMG---FIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 91 ~d~vi~~a~~~-~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
+|+|||+|+.. .... ....+.+..+++|+.++.++++++.. .+..++|++||...+..
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------- 150 (262)
T 1zem_A 85 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG-------------- 150 (262)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC--------------
T ss_pred CCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC--------------
Confidence 99999999965 2111 12223456788999999988887654 34569999999766532
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCC
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGP 205 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~ 205 (374)
......|+.+|...+.+.+.++.+ .++++.+++||.+..+
T Consensus 151 ---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (262)
T 1zem_A 151 ---PPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 193 (262)
T ss_dssp ---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence 123458999999999998888754 4799999999988754
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.5e-18 Score=151.98 Aligned_cols=218 Identities=15% Similarity=0.061 Sum_probs=153.4
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
..++++|||||+|.||+++++.|+++|++|+++.++....... ....+.++.+|+++.+.+..+++
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 84 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence 3568999999999999999999999999999875443321110 12245778899999887776654
Q ss_pred ------CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCC
Q 017290 90 ------GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 90 ------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
++|++||+|+........+ .+.+..+++|+.++..+++++... +..++|++||...+..
T Consensus 85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~---------- 154 (255)
T 3icc_A 85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS---------- 154 (255)
T ss_dssp HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC----------
T ss_pred ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC----------
Confidence 2899999999754322222 223456789999999999988764 2338999999876532
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCC
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
......|+.+|...+.+.+.++.+ .++++.+++||.+..+........ .........
T Consensus 155 -------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~--------- 214 (255)
T 3icc_A 155 -------LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSD----PMMKQYATT--------- 214 (255)
T ss_dssp -------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTS----HHHHHHHHH---------
T ss_pred -------CCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhccc----HHHHHhhhc---------
Confidence 223468999999999999988776 479999999999987753211101 111111111
Q ss_pred CcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
......+.+.+|+|++++.++... .++++++.+|..
T Consensus 215 ~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~ 254 (255)
T 3icc_A 215 ISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGSC 254 (255)
T ss_dssp TSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSTT
T ss_pred cCCcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCee
Confidence 112345778999999999888643 478889887753
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.8e-19 Score=158.06 Aligned_cols=219 Identities=11% Similarity=-0.010 Sum_probs=144.1
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhh----hccCCCEEEEcc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLK----VTKGVDHVFNLA 98 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~----~~~~~d~vi~~a 98 (374)
||++|||||+|+||+++++.|+++|++|++++|+........ ..+..+...|..+.+.+.+ .+.++|++||+|
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nA 80 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSND 80 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEEC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 478999999999999999999999999999999865422110 0011222224444333222 223899999999
Q ss_pred ccc-CCccc---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCC
Q 017290 99 ADM-GGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170 (374)
Q Consensus 99 ~~~-~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~ 170 (374)
+.. ..... ...+.+..+++|+.++..+++++. +.+..++|++||...+.. ..+..
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~~~~ 143 (254)
T 1zmt_A 81 IFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP-----------------WKELS 143 (254)
T ss_dssp CCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC-----------------CTTCH
T ss_pred CcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccC-----------------CCCch
Confidence 975 22111 222345678899999988888764 445569999999876531 22346
Q ss_pred chHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCc---HHHHHHHHhccCCceEeeCCCccccccee
Q 017290 171 AYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKA---PAAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 171 ~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
.|+.+|...+.+.+.++.+. ++++.+++||.++|+.......... .......... ......+.+
T Consensus 144 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~----------~~p~~~~~~ 213 (254)
T 1zmt_A 144 TYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKK----------VTALQRLGT 213 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHH----------HSSSSSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhc----------cCCCCCCcC
Confidence 89999999999999987663 7999999999998875432110000 0011111110 001224678
Q ss_pred HHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 245 IDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
.+|+|++++.++..+ .+..+++.++..
T Consensus 214 p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 244 (254)
T 1zmt_A 214 QKELGELVAFLASGSCDYLTGQVFWLAGGFP 244 (254)
T ss_dssp HHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred HHHHHHHHHHHhCcccCCccCCEEEECCCch
Confidence 999999999988764 367788877643
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.79 E-value=7e-19 Score=157.73 Aligned_cols=204 Identities=17% Similarity=0.094 Sum_probs=143.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-------cccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-------MFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
..++++|||||+|.||+++++.|+++|++|++++|+........ ...+.++.+|++|.+.+.++++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (281)
T 4dry_A 31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA 110 (281)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999999999999865322111 1124788999999998877764
Q ss_pred CCCEEEEcccccCC-cc---cccCCcceehhhhHHHHHHHHHHHH----hCC--CCeEEEeecccccCCCcccccccCCC
Q 017290 90 GVDHVFNLAADMGG-MG---FIQSNHSVIMYNNTMISFNMLEASR----ISG--VKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 ~~d~vi~~a~~~~~-~~---~~~~~~~~~~~~n~~~~~~ll~a~~----~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|++||+||.... .. ....+.+..+++|+.++..+++++. +.+ ..++|++||...+.
T Consensus 111 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~------------ 178 (281)
T 4dry_A 111 RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT------------ 178 (281)
T ss_dssp CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC------------
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC------------
Confidence 68999999997532 11 2223345578899999887777654 332 34899999976642
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
+..+...|+.+|...+.+.+.++.+ .++++.+++||.+..+... .... ........
T Consensus 179 -----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~-------------~~~~---~~~~~~~~ 237 (281)
T 4dry_A 179 -----PRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA-------------RMST---GVLQANGE 237 (281)
T ss_dssp -----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC--------------------C---EEECTTSC
T ss_pred -----CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh-------------hhcc---hhhhhhhc
Confidence 2234578999999999999998865 5799999999999865311 0100 00000111
Q ss_pred cccccceeHHHHHHHHHhhhccCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~~ 260 (374)
.....++..+|+|++++.++..+.
T Consensus 238 ~~~~~~~~pedvA~~v~fL~s~~~ 261 (281)
T 4dry_A 238 VAAEPTIPIEHIAEAVVYMASLPL 261 (281)
T ss_dssp EEECCCBCHHHHHHHHHHHHHSCT
T ss_pred ccccCCCCHHHHHHHHHHHhCCCc
Confidence 223357899999999999998775
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.79 E-value=5e-18 Score=151.14 Aligned_cols=219 Identities=11% Similarity=0.055 Sum_probs=158.5
Q ss_pred CCCCCeEEEEcCc--chhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhcc---
Q 017290 23 PSEKLRISVTGAG--GFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTK--- 89 (374)
Q Consensus 23 ~~~~~~ilItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~--- 89 (374)
...+++++||||+ |.||++++++|++.|++|++++|+....... ....+.++.+|+++.+.+.++++
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV 96 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence 4567899999999 8999999999999999999999886543110 12356788999999988877764
Q ss_pred ----CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCC
Q 017290 90 ----GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 90 ----~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
++|++||+|+....... ...+.+..+++|+.++.++++++ ++.+..++|++||...+...
T Consensus 97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 167 (267)
T 3gdg_A 97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN--------- 167 (267)
T ss_dssp HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC---------
Confidence 67999999997643222 22334567889999999988877 44555699999997654321
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhhhC--CcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKDFG--IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
...+...|+.+|...+.+++.++.+.. +.+..+.||.+..+... ......... +. ..
T Consensus 168 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~-----~~~~~~~~~-~~---------~~ 226 (267)
T 3gdg_A 168 ------FPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSD-----FVPKETQQL-WH---------SM 226 (267)
T ss_dssp ------SSSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGG-----GSCHHHHHH-HH---------TT
T ss_pred ------CCCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhh-----hCCHHHHHH-HH---------hc
Confidence 112456899999999999999987754 78889999999765321 111122221 11 12
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
.+...+.+.+|+|++++.++... .+..+++.+|..
T Consensus 227 ~~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~ 265 (267)
T 3gdg_A 227 IPMGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYT 265 (267)
T ss_dssp STTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred CCCCCCcCHHHHHhHhheeecCccccccCCEEEECCcee
Confidence 23456788999999999988654 367888887654
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-18 Score=155.25 Aligned_cols=201 Identities=12% Similarity=0.005 Sum_probs=139.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-----cccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-----MFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
|++|||||+|.||+++++.|+++|++|++++|+........ ...+.++.+|++|.+.+..+++ ++|++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 101 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL 101 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 78999999999999999999999999999999864322110 0256788999999998887775 46999
Q ss_pred EEcccccCC-ccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCC-eEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 95 FNLAADMGG-MGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVK-RFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 95 i~~a~~~~~-~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~-~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
||+|+.... ... ...+.+..+++|+.++..+++++ ++.+.. ++|++||...+. +
T Consensus 102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~-----------------~ 164 (272)
T 2nwq_A 102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKW-----------------P 164 (272)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTS-----------------C
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhcc-----------------C
Confidence 999997531 111 12234557889999977776655 345556 999999987653 1
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccc
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (374)
......|+.+|...+.+.+.++.+ .++++.+++||.+..+.... . ..... ........ ...+
T Consensus 165 ~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~-----~----~~~~~--~~~~~~~~----~~~~ 229 (272)
T 2nwq_A 165 YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLV-----R----FGGDQ--ARYDKTYA----GAHP 229 (272)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------------------CCCC
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhc-----c----cccch--HHHHHhhc----cCCC
Confidence 223468999999999999998865 47999999999998763210 0 00000 00000000 1124
Q ss_pred eeHHHHHHHHHhhhccC
Q 017290 243 TFIDECVEGVLRLTKSD 259 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~ 259 (374)
+..+|+|++++.++..+
T Consensus 230 ~~pedvA~~v~~l~s~~ 246 (272)
T 2nwq_A 230 IQPEDIAETIFWIMNQP 246 (272)
T ss_dssp BCHHHHHHHHHHHHTSC
T ss_pred CCHHHHHHHHHHHhCCC
Confidence 78999999999998765
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=4.2e-19 Score=159.26 Aligned_cols=221 Identities=11% Similarity=0.019 Sum_probs=152.4
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCC
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
...+|++|||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|+++.+.+..+++ ++|
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKID 81 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 45678999999999999999999999999999999986532221 12356788999999888776664 789
Q ss_pred EEEEcccccCCcccc-c-------CCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCC
Q 017290 93 HVFNLAADMGGMGFI-Q-------SNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~-~-------~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++||+|+........ . ...+..+++|+.++..+++++.. .+ .++|++||...+.
T Consensus 82 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~------------- 147 (281)
T 3zv4_A 82 TLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFY------------- 147 (281)
T ss_dssp EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTS-------------
T ss_pred EEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhcc-------------
Confidence 999999975321111 1 11345677999999998887643 23 4999999976643
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhhC--CcEEEEeeCcccCCCCCCCCCCCcHHHH-----HHHHhccCCceEee
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDFG--IECRVGRFHNIYGPFGTWKGMEKAPAAF-----CRKALTSTDKFEMW 233 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~g~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 233 (374)
+......|+.+|...+.+.+.++.+.+ +++..++||.+..+...... ....... ....+.
T Consensus 148 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~~~~-------- 214 (281)
T 3zv4_A 148 ----PNGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSS-LGLSEQSISSVPLADMLK-------- 214 (281)
T ss_dssp ----SSSSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTT-CC--------CCHHHHHH--------
T ss_pred ----CCCCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccc-cccccccccchhHHHHHH--------
Confidence 222346799999999999999987644 89999999999876321100 0000000 001111
Q ss_pred CCCcccccceeHHHHHHHHHhhhc-cC----CCCcEEecCCCc
Q 017290 234 GDGLQTRSFTFIDECVEGVLRLTK-SD----FREPVNIGSDEM 271 (374)
Q Consensus 234 ~~~~~~~~~i~~~Dva~~i~~~~~-~~----~~~~~~i~~~~~ 271 (374)
...+...+...+|+|.+++.++. .. .+..+++.+|..
T Consensus 215 -~~~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~ 256 (281)
T 3zv4_A 215 -SVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMG 256 (281)
T ss_dssp -HTCTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred -hcCCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence 11123457788999999999887 33 367888887654
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=8.4e-20 Score=167.25 Aligned_cols=170 Identities=14% Similarity=0.092 Sum_probs=126.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-------EEEEEeCCCCc--cc----ccccccceeEEecccchhhHhhhccCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-------YIIASDWKKNE--HM----TEDMFCHEFHLVDLRVMDNCLKVTKGV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~----~~~~~~i~~~~~dl~~~~~~~~~~~~~ 91 (374)
++|||+||||+||||++++..|++.|+ +|+++++.+.. .. ......+.++ +|+.+.+.+.++++++
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~~ 81 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKDA 81 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCCC
Confidence 347999999999999999999999986 89999986421 00 0111112333 6787777778888999
Q ss_pred CEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CC-eEEEeecccc-cCCCcccccccCCCCCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VK-RFFYASSACI-YPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~-~~i~~Ss~~v-y~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
|+|||+|+.... ...+....+..|+.++.++++++++.+ .+ +++++|+..- .. ++.++......|
T Consensus 82 D~Vih~Ag~~~~---~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~---------~~~~~~~~~~~p 149 (327)
T 1y7t_A 82 DYALLVGAAPRK---AGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA---------LIAYKNAPGLNP 149 (327)
T ss_dssp SEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH---------HHHHHTCTTSCG
T ss_pred CEEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH---------HHHHHHcCCCCh
Confidence 999999997542 124556788999999999999999986 65 7888777431 00 111111002346
Q ss_pred CCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCC
Q 017290 169 QDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFG 207 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~ 207 (374)
...|+.+|+..|++...+++..+++.+++|+++|||+++
T Consensus 150 ~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~ 188 (327)
T 1y7t_A 150 RNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS 188 (327)
T ss_dssp GGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred hheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence 678999999999999999998999999999999999875
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=9.4e-18 Score=151.22 Aligned_cols=215 Identities=15% Similarity=0.059 Sum_probs=153.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEe-CCCCccccc-------ccccceeEEecccchh-------------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASD-WKKNEHMTE-------DMFCHEFHLVDLRVMD------------- 82 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~-------~~~~i~~~~~dl~~~~------------- 82 (374)
+.+|++|||||+|.||+++++.|+++|++|++++ |+....... ....+.++.+|+++.+
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 86 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence 4568999999999999999999999999999999 875432110 1124678899999988
Q ss_pred ----hHhhhcc-------CCCEEEEcccccCCcccc-----------------cCCcceehhhhHHHHHHHHHHHH----
Q 017290 83 ----NCLKVTK-------GVDHVFNLAADMGGMGFI-----------------QSNHSVIMYNNTMISFNMLEASR---- 130 (374)
Q Consensus 83 ----~~~~~~~-------~~d~vi~~a~~~~~~~~~-----------------~~~~~~~~~~n~~~~~~ll~a~~---- 130 (374)
.+.++++ ++|++||+|+........ ..+.+..+++|+.++..+++++.
T Consensus 87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 166 (291)
T 1e7w_A 87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 166 (291)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 7777665 789999999975322111 22334568899999988888765
Q ss_pred hCC------CCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCc
Q 017290 131 ISG------VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHN 201 (374)
Q Consensus 131 ~~~------~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~ 201 (374)
+.+ ..++|++||...+. +......|+.+|...+.+.+.++.+ .++++.+++||.
T Consensus 167 ~~~~~~~~~~g~Iv~isS~~~~~-----------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~ 229 (291)
T 1e7w_A 167 GTPAKHRGTNYSIINMVDAMTNQ-----------------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 229 (291)
T ss_dssp TSCGGGSCSCEEEEEECCTTTTS-----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred hcCCCCCCCCcEEEEEechhhcC-----------------CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCC
Confidence 334 45899999987653 2234468999999999999988765 479999999999
Q ss_pred ccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc-cceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 202 IYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR-SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 202 v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
+..+. . ....+...... . .+.. .+...+|+|++++.++... .+..+++.++..+
T Consensus 230 v~T~~-~------~~~~~~~~~~~-~---------~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 288 (291)
T 1e7w_A 230 SVLVD-D------MPPAVWEGHRS-K---------VPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 288 (291)
T ss_dssp BCCGG-G------SCHHHHHHHHT-T---------CTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ccCCc-c------CCHHHHHHHHh-h---------CCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence 87653 1 00122222211 1 1112 4678999999999988643 3677888776543
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.6e-18 Score=148.70 Aligned_cols=214 Identities=13% Similarity=0.056 Sum_probs=156.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc---CCCEEEEccccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK---GVDHVFNLAADM 101 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~---~~d~vi~~a~~~ 101 (374)
.+|++|||||++-||+++++.|++.|++|++++|+...........+..+.+|++|.+.+.++++ ++|++||+||..
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi~ 89 (242)
T 4b79_A 10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGIS 89 (242)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 57999999999999999999999999999999999876655555677889999999998887775 799999999975
Q ss_pred CCc-ccccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhH
Q 017290 102 GGM-GFIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEK 176 (374)
Q Consensus 102 ~~~-~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK 176 (374)
... +....+++..+++|+.++..+.+++. +.+ .++|++||..... +......|..+|
T Consensus 90 ~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~-----------------~~~~~~~Y~asK 151 (242)
T 4b79_A 90 RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTF-----------------GSADRPAYSASK 151 (242)
T ss_dssp CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTS-----------------CCSSCHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccC-----------------CCCCCHHHHHHH
Confidence 422 22333456678899999888777653 233 3899999976532 122346899999
Q ss_pred HHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHH
Q 017290 177 LASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVL 253 (374)
Q Consensus 177 ~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~ 253 (374)
.....+.+.++.+ .++++..+.||.+.-+...... . -......... .. +..++...+|+|.+++
T Consensus 152 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~--~-~~~~~~~~~~-~~---------PlgR~g~peeiA~~v~ 218 (242)
T 4b79_A 152 GAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLK--A-DVEATRRIMQ-RT---------PLARWGEAPEVASAAA 218 (242)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----C--C-CHHHHHHHHH-TC---------TTCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhccc--C-CHHHHHHHHh-cC---------CCCCCcCHHHHHHHHH
Confidence 9999999988765 4799999999999766321110 0 1122222222 11 1234678899999999
Q ss_pred hhhccC----CCCcEEecCC
Q 017290 254 RLTKSD----FREPVNIGSD 269 (374)
Q Consensus 254 ~~~~~~----~~~~~~i~~~ 269 (374)
.++... .+..+.+.+|
T Consensus 219 fLaSd~a~~iTG~~l~VDGG 238 (242)
T 4b79_A 219 FLCGPGASFVTGAVLAVDGG 238 (242)
T ss_dssp HHTSGGGTTCCSCEEEESTT
T ss_pred HHhCchhcCccCceEEECcc
Confidence 988654 3677777765
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.5e-17 Score=150.70 Aligned_cols=208 Identities=16% Similarity=0.076 Sum_probs=150.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------------ccccceeEEecccchhhHhhhcc-
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------------DMFCHEFHLVDLRVMDNCLKVTK- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------~~~~i~~~~~dl~~~~~~~~~~~- 89 (374)
..++++|||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.++++
T Consensus 43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~ 122 (346)
T 3kvo_A 43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK 122 (346)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence 3568999999999999999999999999999999987653221 11246788899999998887775
Q ss_pred ------CCCEEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCccccccc
Q 017290 90 ------GVDHVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNV 156 (374)
Q Consensus 90 ------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~ 156 (374)
++|+|||+|+........ ..+.+..+++|+.++..+++++. +.+..++|++||...+...
T Consensus 123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~------- 195 (346)
T 3kvo_A 123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV------- 195 (346)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG-------
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC-------
Confidence 899999999975422222 22345678999999999998874 3455699999997665321
Q ss_pred CCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh--CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeC
Q 017290 157 SLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF--GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWG 234 (374)
Q Consensus 157 ~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (374)
.......|+.+|...+.+++.++.+. ++.+.++.|+.+... .+... +..
T Consensus 196 --------~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T------------~~~~~-~~~-------- 246 (346)
T 3kvo_A 196 --------WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT------------AAMDM-LGG-------- 246 (346)
T ss_dssp --------GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC------------HHHHH-HCC--------
T ss_pred --------CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc------------HHHHh-hcc--------
Confidence 12245689999999999999998764 699999999964432 12221 111
Q ss_pred CCcccccceeHHHHHHHHHhhhccC--CCCcEEecC
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSD--FREPVNIGS 268 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~--~~~~~~i~~ 268 (374)
......+...+|+|++++.++... ..+.+.+.+
T Consensus 247 -~~~~~r~~~pedvA~~v~~L~s~~~~itG~~ivdg 281 (346)
T 3kvo_A 247 -PGIESQCRKVDIIADAAYSIFQKPKSFTGNFVIDE 281 (346)
T ss_dssp ---CGGGCBCTHHHHHHHHHHHTSCTTCCSCEEEHH
T ss_pred -ccccccCCCHHHHHHHHHHHHhcCCCCCceEEECC
Confidence 112345678899999999999763 234444443
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=3e-18 Score=150.71 Aligned_cols=197 Identities=16% Similarity=0.098 Sum_probs=142.5
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecc--cchhhHhhhcc----
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDL--RVMDNCLKVTK---- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl--~~~~~~~~~~~---- 89 (374)
...+++++||||+|.||+++++.|+++|++|++++|+....... ......++.+|+ .+.+.+.++++
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999986532211 112456677777 77777666553
Q ss_pred ---CCCEEEEcccccCCc-c---cccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCC
Q 017290 90 ---GVDHVFNLAADMGGM-G---FIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 90 ---~~d~vi~~a~~~~~~-~---~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
++|++||+|+..... . ....+.+..+++|+.++..+++++ ++.+..++|++||...+.
T Consensus 91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------- 159 (247)
T 3i1j_A 91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRK----------- 159 (247)
T ss_dssp HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTS-----------
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcC-----------
Confidence 799999999975321 1 122334567889999999999887 344556999999976643
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhh----hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeC
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKD----FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWG 234 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (374)
+..+...|+.+|...+.+++.++.+ .++++..++||.+..+ +......
T Consensus 160 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~-------------~~~~~~~--------- 211 (247)
T 3i1j_A 160 ------GRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG-------------MRAQAYP--------- 211 (247)
T ss_dssp ------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH-------------HHHHHST---------
T ss_pred ------CCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc-------------cchhccc---------
Confidence 2234568999999999999998866 3688899999988643 1222211
Q ss_pred CCcccccceeHHHHHHHHHhhhccC
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSD 259 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~ 259 (374)
......+...+|+|++++.++...
T Consensus 212 -~~~~~~~~~p~dva~~~~~l~s~~ 235 (247)
T 3i1j_A 212 -DENPLNNPAPEDIMPVYLYLMGPD 235 (247)
T ss_dssp -TSCGGGSCCGGGGTHHHHHHHSGG
T ss_pred -ccCccCCCCHHHHHHHHHHHhCch
Confidence 112234677899999999988654
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.5e-17 Score=147.19 Aligned_cols=200 Identities=13% Similarity=0.041 Sum_probs=144.7
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------------ccccceeEEecccchhhHhhhc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------------DMFCHEFHLVDLRVMDNCLKVT 88 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------~~~~i~~~~~dl~~~~~~~~~~ 88 (374)
+..++|++|||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|++|.+.+.+++
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 81 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV 81 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 445779999999999999999999999999999999987642211 0224678899999999887776
Q ss_pred c-------CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCccccc
Q 017290 89 K-------GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLET 154 (374)
Q Consensus 89 ~-------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~ 154 (374)
+ ++|++||+|+........+ .+.+..+++|+.++..+++++.. .+..++|++||...+....
T Consensus 82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---- 157 (274)
T 3e03_A 82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW---- 157 (274)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH----
T ss_pred HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC----
Confidence 4 7899999999754222222 23455688999999999887643 4456999999976643210
Q ss_pred ccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceE
Q 017290 155 NVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFE 231 (374)
Q Consensus 155 ~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (374)
......|+.+|...+.+.+.++.+ .++++.+++||.+.... +. ....
T Consensus 158 -----------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~------------~~-~~~~------ 207 (274)
T 3e03_A 158 -----------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD------------AI-NMLP------ 207 (274)
T ss_dssp -----------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC--------------------------
T ss_pred -----------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc------------hh-hhcc------
Confidence 123457999999999999988765 47999999999544321 00 1111
Q ss_pred eeCCCcccccceeHHHHHHHHHhhhccC
Q 017290 232 MWGDGLQTRSFTFIDECVEGVLRLTKSD 259 (374)
Q Consensus 232 ~~~~~~~~~~~i~~~Dva~~i~~~~~~~ 259 (374)
......+...+|+|++++.++...
T Consensus 208 ----~~~~~~~~~pedvA~~v~~l~s~~ 231 (274)
T 3e03_A 208 ----GVDAAACRRPEIMADAAHAVLTRE 231 (274)
T ss_dssp ----CCCGGGSBCTHHHHHHHHHHHTSC
T ss_pred ----cccccccCCHHHHHHHHHHHhCcc
Confidence 112234678999999999998765
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-17 Score=160.18 Aligned_cols=217 Identities=13% Similarity=0.040 Sum_probs=154.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCE-EEEEeCCCCcccc---------cccccceeEEecccchhhHhhhccC----
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHMT---------EDMFCHEFHLVDLRVMDNCLKVTKG---- 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~---------~~~~~i~~~~~dl~~~~~~~~~~~~---- 90 (374)
.++++|||||+|+||.++++.|+++|+. |++++|+...... .....+.++.+|++|.+.+..+++.
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~ 304 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 304 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 5689999999999999999999999985 9999998642210 1122568899999999999888865
Q ss_pred --CCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 91 --VDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 91 --~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
+|+|||+|+....... ...+....+..|+.++.++.+++...+.++||++||...+-.
T Consensus 305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g----------------- 367 (486)
T 2fr1_A 305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFG----------------- 367 (486)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTC-----------------
T ss_pred CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCC-----------------
Confidence 4999999997542211 222345567889999999999999888889999999654321
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeH
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
......|+.+|...+.+.+.+.. .++++++++||.+.+.+.. ...... .+. .....+++.
T Consensus 368 ~~g~~~Yaaaka~l~~la~~~~~-~gi~v~~i~pG~~~~~gm~--------~~~~~~---------~~~--~~g~~~i~~ 427 (486)
T 2fr1_A 368 APGLGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMA--------EGPVAD---------RFR--RHGVIEMPP 427 (486)
T ss_dssp CTTCTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC-----------------------------CT--TTTEECBCH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHh-cCCeEEEEECCeeCCCccc--------chhHHH---------HHH--hcCCCCCCH
Confidence 12346899999999998877654 5899999999999875310 000000 001 123467999
Q ss_pred HHHHHHHHhhhccCCCCcEEecCCCccCHHHHHHHHH
Q 017290 246 DECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVL 282 (374)
Q Consensus 246 ~Dva~~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~ 282 (374)
+|+++++..++..+...+... .+.|..+...+.
T Consensus 428 e~~a~~l~~~l~~~~~~~~v~----~~d~~~~~~~~~ 460 (486)
T 2fr1_A 428 ETACRALQNALDRAEVCPIVI----DVRWDRFLLAYT 460 (486)
T ss_dssp HHHHHHHHHHHHTTCSSCEEC----EECHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCeEEEE----eCCHHHHhhhhc
Confidence 999999999998776544332 256777665544
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2.6e-18 Score=152.34 Aligned_cols=208 Identities=13% Similarity=0.059 Sum_probs=142.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHh---CCCEEEEEeCCCCcccccc--------cccceeEEecccchhhHhhhcc---
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKS---EGHYIIASDWKKNEHMTED--------MFCHEFHLVDLRVMDNCLKVTK--- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~--------~~~i~~~~~dl~~~~~~~~~~~--- 89 (374)
.++|++|||||+|.||+++++.|++ .|++|++++|+........ ...+.++.+|+++.+.+..+++
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR 83 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence 4568899999999999999999999 8999999999864322110 2246788999999888776653
Q ss_pred ------CCC--EEEEcccccCCc--cc----ccCCcceehhhhHHHHHHHHHHHHhC------CCCeEEEeecccccCCC
Q 017290 90 ------GVD--HVFNLAADMGGM--GF----IQSNHSVIMYNNTMISFNMLEASRIS------GVKRFFYASSACIYPEF 149 (374)
Q Consensus 90 ------~~d--~vi~~a~~~~~~--~~----~~~~~~~~~~~n~~~~~~ll~a~~~~------~~~~~i~~Ss~~vy~~~ 149 (374)
++| ++||+|+..... .. ...+.+..+++|+.++..+++++... +..++|++||...+.
T Consensus 84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~-- 161 (259)
T 1oaa_A 84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ-- 161 (259)
T ss_dssp HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS--
T ss_pred hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC--
Confidence 468 999999975321 11 22344567899999999999988653 223799999987753
Q ss_pred cccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhhC-CcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCC
Q 017290 150 KQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFG-IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTD 228 (374)
Q Consensus 150 ~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~~-~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~ 228 (374)
+..+...|+.+|...+.+.+.++.+.. +++..++||.+-.+. ...+... .....
T Consensus 162 ---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~---------~~~~~~~-~~~~~ 216 (259)
T 1oaa_A 162 ---------------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM---------QQLARET-SKDPE 216 (259)
T ss_dssp ---------------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH---------HHHHHHH-CSCHH
T ss_pred ---------------CCCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcch---------HHHHhhc-cCChh
Confidence 223456899999999999999987754 888889998875431 1111000 00000
Q ss_pred ceEeeCCCcccccceeHHHHHHHHHhhhcc
Q 017290 229 KFEMWGDGLQTRSFTFIDECVEGVLRLTKS 258 (374)
Q Consensus 229 ~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~ 258 (374)
....+....+...+.+.+|+|++++.++..
T Consensus 217 ~~~~~~~~~p~~~~~~p~dvA~~v~~l~~~ 246 (259)
T 1oaa_A 217 LRSKLQKLKSDGALVDCGTSAQKLLGLLQK 246 (259)
T ss_dssp HHHHHHHHHHTTCSBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcCCcCCHHHHHHHHHHHHhh
Confidence 000000001123578999999999998864
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4.2e-17 Score=142.13 Aligned_cols=208 Identities=13% Similarity=0.051 Sum_probs=150.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--ccccceeEEecccchhhHhhhcc-------CCCEEEE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--DMFCHEFHLVDLRVMDNCLKVTK-------GVDHVFN 96 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi~ 96 (374)
.|+||||||++-||+++++.|++.|++|.+++|+....... ...++..+.+|++|.+++.++++ ++|++||
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN 81 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN 81 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 48999999999999999999999999999999986543222 22356788999999988877764 7999999
Q ss_pred cccccCCcccc---cCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 97 LAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 97 ~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
+|+........ ..+.+..+++|+.++..+.+++. +.+ .++|++||...+.. ....
T Consensus 82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~-----------------~~~~ 143 (247)
T 3ged_A 82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQS-----------------EPDS 143 (247)
T ss_dssp CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSC-----------------CTTC
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccC-----------------CCCC
Confidence 99976433222 23456678899999888877663 333 48999999766421 1224
Q ss_pred CchHHhHHHHHHHHHHHHhhh--CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHH
Q 017290 170 DAYGLEKLASEELCKHYTKDF--GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 247 (374)
..|+.+|.....+.+.++.+. ++++..+.||.+--+... ... ..... . .+...+...+|
T Consensus 144 ~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~-----~~~----~~~~~-~---------~Pl~R~g~ped 204 (247)
T 3ged_A 144 EAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQ-----EFT----QEDCA-A---------IPAGKVGTPKD 204 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC--------CC----HHHHH-T---------STTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcH-----HHH----HHHHh-c---------CCCCCCcCHHH
Confidence 589999999999998887664 589999999998654321 111 11111 1 11234678899
Q ss_pred HHHHHHhhhccC--CCCcEEecCCC
Q 017290 248 CVEGVLRLTKSD--FREPVNIGSDE 270 (374)
Q Consensus 248 va~~i~~~~~~~--~~~~~~i~~~~ 270 (374)
+|.+++.++... .+.++.+.+|-
T Consensus 205 iA~~v~fL~s~~~iTG~~i~VDGG~ 229 (247)
T 3ged_A 205 ISNMVLFLCQQDFITGETIIVDGGM 229 (247)
T ss_dssp HHHHHHHHHHCSSCCSCEEEESTTG
T ss_pred HHHHHHHHHhCCCCCCCeEEECcCH
Confidence 999999998754 36778887653
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.8e-18 Score=150.69 Aligned_cols=214 Identities=11% Similarity=0.014 Sum_probs=138.4
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEE-e--CCCCccccccc--ccceeEEecccchhhHhh----hccCCCEEEE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIAS-D--WKKNEHMTEDM--FCHEFHLVDLRVMDNCLK----VTKGVDHVFN 96 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~--~~i~~~~~dl~~~~~~~~----~~~~~d~vi~ 96 (374)
+|++|||||+|+||+++++.|+++|++|+++ + |+......... .+..+. |..+.+.+.+ .+.++|++||
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~g~iD~lv~ 78 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIAL--AEQKPERLVDATLQHGEAIDTIVS 78 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEEEC--CCCCGGGHHHHHGGGSSCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCccc--CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4789999999999999999999999999999 6 87543221110 011111 3333322222 2237899999
Q ss_pred cccccCC---ccc---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 97 LAADMGG---MGF---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 97 ~a~~~~~---~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
+|+.... ... ...+.+..+++|+.++..+++++. +.+..++|++||...+.. .
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------------~ 141 (244)
T 1zmo_A 79 NDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKP-----------------L 141 (244)
T ss_dssp CCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------------C
T ss_pred CCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCC-----------------C
Confidence 9997542 111 222345578899999998888764 455569999999876532 2
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcH-HHHHHHHhccCCceEeeCCCcccccc
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAP-AAFCRKALTSTDKFEMWGDGLQTRSF 242 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (374)
.....|+.+|...+.+.+.++.+ .++++.+++||.+..+.... ..... .......... ......+
T Consensus 142 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~---------~~p~~r~ 210 (244)
T 1zmo_A 142 AYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFP--TSDWENNPELRERVDR---------DVPLGRL 210 (244)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBC--HHHHHHCHHHHHHHHH---------HCTTCSC
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc--cccccchHHHHHHHhc---------CCCCCCC
Confidence 23468999999999999988765 47999999999987653100 00000 0111111100 0012246
Q ss_pred eeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 243 TFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
...+|+|++++.++... .+..+.+.++
T Consensus 211 ~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG 241 (244)
T 1zmo_A 211 GRPDEMGALITFLASRRAAPIVGQFFAFTGG 241 (244)
T ss_dssp BCHHHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred cCHHHHHHHHHHHcCccccCccCCEEEeCCC
Confidence 78999999999988764 2667777665
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.6e-17 Score=140.73 Aligned_cols=222 Identities=13% Similarity=0.042 Sum_probs=155.1
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+..++|+++||||++-||+++++.|++.|.+|++++|+....... ...++..+.+|+++.+++.++++
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 456789999999999999999999999999999999986542211 12246788999999998887764
Q ss_pred -CCCEEEEcccccCCc----ccccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 -GVDHVFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+||..... +....+++..+++|+.++..+.+++. +.+-.++|++||...+.
T Consensus 83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~------------- 149 (254)
T 4fn4_A 83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIR------------- 149 (254)
T ss_dssp SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-------------
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcC-------------
Confidence 799999999965321 22333456678899999888877653 34444999999976542
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+......|+.+|.....+.+.++.+ +|+++..+.||.+-.+......... ............
T Consensus 150 ----~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~--~~~~~~~~~~~~--------- 214 (254)
T 4fn4_A 150 ----GGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPS--ELGMRTLTKLMS--------- 214 (254)
T ss_dssp ----SSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCC--HHHHHHHHHHHT---------
T ss_pred ----CCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCc--HHHHHHHHhcCC---------
Confidence 1123468999999999999888765 4799999999999765321111111 111111111000
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
...++...+|+|.+++.++... .+..+.+.+|-.
T Consensus 215 ~~~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~t 252 (254)
T 4fn4_A 215 LSSRLAEPEDIANVIVFLASDEASFVNGDAVVVDGGLT 252 (254)
T ss_dssp TCCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCcc
Confidence 1124567899999999988654 367788876643
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.73 E-value=4.6e-17 Score=145.03 Aligned_cols=218 Identities=12% Similarity=0.005 Sum_probs=148.8
Q ss_pred CCCeEEEEcC--cchhHHHHHHHHHhCCCEEEEEeCCCCcc-cc---cccccceeEEecccchhhHhhhcc---------
Q 017290 25 EKLRISVTGA--GGFIASHIARRLKSEGHYIIASDWKKNEH-MT---EDMFCHEFHLVDLRVMDNCLKVTK--------- 89 (374)
Q Consensus 25 ~~~~ilItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~---~~~~~i~~~~~dl~~~~~~~~~~~--------- 89 (374)
.+|+++|||| +|.||+++++.|++.|++|++++|+.... .. .....+.++.+|+++.+.+.++++
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~ 85 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 85 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5688999999 99999999999999999999999986431 11 111246788999999998887765
Q ss_pred -CCCEEEEcccccCC-----ccc---ccCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCC
Q 017290 90 -GVDHVFNLAADMGG-----MGF---IQSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 90 -~~d~vi~~a~~~~~-----~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
++|++||+|+.... ... ...+.+..+++|+.++..+++++...- -.++|++||...++
T Consensus 86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~----------- 154 (269)
T 2h7i_A 86 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA----------- 154 (269)
T ss_dssp CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC-----------
T ss_pred CCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc-----------
Confidence 79999999996531 111 122334568899999999999886532 13899999865421
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCC--C-CCCcHH----HHHHHHhccCC
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWK--G-MEKAPA----AFCRKALTSTD 228 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~--~-~~~~~~----~~~~~~~~~~~ 228 (374)
......|+.+|...+.+.+.++.+. ++++.+++||.+..+..... . ...... .+...... .
T Consensus 155 -------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 225 (269)
T 2h7i_A 155 -------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQ-R- 225 (269)
T ss_dssp -------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHH-H-
T ss_pred -------cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhc-c-
Confidence 1234689999999999999987663 79999999998865410000 0 000000 00000000 0
Q ss_pred ceEeeCCCcccc-cceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 229 KFEMWGDGLQTR-SFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 229 ~~~~~~~~~~~~-~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.+.. .+...+|+|++++.++... .+..+.+.++.
T Consensus 226 --------~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 264 (269)
T 2h7i_A 226 --------APIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 264 (269)
T ss_dssp --------CTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred --------CCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence 0111 3667899999999998754 25677777664
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.9e-17 Score=146.77 Aligned_cols=207 Identities=14% Similarity=-0.031 Sum_probs=137.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc------cccceeEEecccchhhHhhhc--------cC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED------MFCHEFHLVDLRVMDNCLKVT--------KG 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~i~~~~~dl~~~~~~~~~~--------~~ 90 (374)
.++++|||||+|+||+++++.|+++|++|++++|+........ ...+.++.+|++|.+.+..++ .+
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 83 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR 83 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 5689999999999999999999999999999999864322110 124678899999988776654 35
Q ss_pred CCEEEEccc--cc-------C-CcccccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCccccccc
Q 017290 91 VDHVFNLAA--DM-------G-GMGFIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNV 156 (374)
Q Consensus 91 ~d~vi~~a~--~~-------~-~~~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~ 156 (374)
+|++||+|+ .. . ..+....+.+..+++|+.++..+.+++. +.+..++|++||...+..
T Consensus 84 id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------- 155 (260)
T 2qq5_A 84 LDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY-------- 155 (260)
T ss_dssp CCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC--------
T ss_pred ceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC--------
Confidence 799999994 22 1 1112222344567889888877766553 455569999999876521
Q ss_pred CCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEee
Q 017290 157 SLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMW 233 (374)
Q Consensus 157 ~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (374)
.+...|+.+|...+.+.+.++.+ .++++.+++||.+..+.... ..... . ..........
T Consensus 156 ----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-----~~~~~--~-~~~~~~~~~~ 217 (260)
T 2qq5_A 156 ----------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKE-----HMAKE--E-VLQDPVLKQF 217 (260)
T ss_dssp ----------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC--------------------------
T ss_pred ----------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHH-----hhccc--c-ccchhHHHHH
Confidence 13468999999999999988764 48999999999998764210 00000 0 0000000000
Q ss_pred CCCcccccceeHHHHHHHHHhhhccC
Q 017290 234 GDGLQTRSFTFIDECVEGVLRLTKSD 259 (374)
Q Consensus 234 ~~~~~~~~~i~~~Dva~~i~~~~~~~ 259 (374)
. .....+...+|+|++++.++..+
T Consensus 218 ~--~~~~~~~~pe~va~~v~~l~s~~ 241 (260)
T 2qq5_A 218 K--SAFSSAETTELSGKCVVALATDP 241 (260)
T ss_dssp ------CHHHHHHHHHHHHHHHHTCT
T ss_pred H--hhhccCCCHHHHHHHHHHHhcCc
Confidence 0 01112467899999999988654
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.73 E-value=2.9e-17 Score=150.32 Aligned_cols=164 Identities=20% Similarity=0.127 Sum_probs=125.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc------------cccceeEEecccchhhHhhhcc----
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED------------MFCHEFHLVDLRVMDNCLKVTK---- 89 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------~~~i~~~~~dl~~~~~~~~~~~---- 89 (374)
+++||||||+|+||+++++.|+++|++|+++.|+........ ...+.++.+|+++.+.+..+++
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence 478999999999999999999999999988877644322110 1346788999999999888876
Q ss_pred -CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 -GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|++||+|+....... ...+.+..+++|+.++.++++++ ++.+..++|++||...+..
T Consensus 82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~------------- 148 (327)
T 1jtv_A 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG------------- 148 (327)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC-------------
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccC-------------
Confidence 48999999996532112 22234567889999999998875 4455669999999866531
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCC
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPF 206 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~ 206 (374)
......|+.+|...+.+++.++.+ .++++++++||.+..+.
T Consensus 149 ----~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 149 ----LPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred ----CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence 123468999999999999998874 58999999999998764
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.5e-16 Score=137.94 Aligned_cols=220 Identities=13% Similarity=0.062 Sum_probs=150.5
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
|..++|++|||||++-||+++++.|++.|++|++.+|+..+... ....+.+|+++.+++..+++ ++|++
T Consensus 7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDil 82 (261)
T 4h15_A 7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLP----EELFVEADLTTKEGCAIVAEATRQRLGGVDVI 82 (261)
T ss_dssp CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSC----TTTEEECCTTSHHHHHHHHHHHHHHTSSCSEE
T ss_pred cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCC----cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45578999999999999999999999999999999997654222 23567899999888776654 78999
Q ss_pred EEcccccCCc-----ccccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 95 FNLAADMGGM-----GFIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 95 i~~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
||+||..... +....+.+..+++|+.++..+.+++. +.+-.++|++||...+-. .
T Consensus 83 VnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~----------------~ 146 (261)
T 4h15_A 83 VHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLP----------------L 146 (261)
T ss_dssp EECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------------C
T ss_pred EECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccC----------------C
Confidence 9999964321 12223445678899999887776653 444458999999755321 1
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhcc-CCce-------EeeC
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTS-TDKF-------EMWG 234 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~ 234 (374)
+.....|+.+|...+.+.+.++.+ .|+++..+.||.+--+. ...+....... +... .-..
T Consensus 147 ~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (261)
T 4h15_A 147 PESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEA---------SVRLAERLAKQAGTDLEGGKKIIMDGL 217 (261)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH---------HHHHHHHHHHHTTCCHHHHHHHHHHHT
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcc---------hhhhhHHHHHhhccchhhHHHHHHHHh
Confidence 112467999999999999888765 47999999999886541 11111111000 0000 0001
Q ss_pred CCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
...+...+...+|+|.+++.++... .+..+.+.+|-
T Consensus 218 ~~~PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~ 257 (261)
T 4h15_A 218 GGIPLGRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT 257 (261)
T ss_dssp TCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred cCCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence 1122345788999999999988653 36778887653
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-16 Score=152.52 Aligned_cols=218 Identities=16% Similarity=0.073 Sum_probs=156.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccc---------cccccceeEEecccchhhHhhhccC--CC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMT---------EDMFCHEFHLVDLRVMDNCLKVTKG--VD 92 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---------~~~~~i~~~~~dl~~~~~~~~~~~~--~d 92 (374)
.+++||||||+|+||.++++.|.++|+ .|++++|+...... .....+.++.+|++|.+.+..++++ +|
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld 337 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN 337 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence 468999999999999999999999999 68889998642111 0122477889999999999998864 99
Q ss_pred EEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHhC-CCCeEEEeecccc-cCCCcccccccCCCCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRIS-GVKRFFYASSACI-YPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~i~~Ss~~v-y~~~~~~~~~~~~~e~~~~~~~ 167 (374)
+|||+|+......... ...+..+..|+.++.++.+++... +.++||++||... ++. .
T Consensus 338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~------------------~ 399 (511)
T 2z5l_A 338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGN------------------A 399 (511)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCC------------------T
T ss_pred EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCC------------------C
Confidence 9999999754321212 233456788999999999998876 6789999999744 332 2
Q ss_pred CCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHH
Q 017290 168 PQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 247 (374)
....|+.+|...+.+++.+.. .++++++++||.+.+.+- ...... .. +. ......++.+|
T Consensus 400 g~~~YaaaKa~ld~la~~~~~-~gi~v~sv~pG~~~~tgm----~~~~~~---~~-~~-----------~~g~~~l~~e~ 459 (511)
T 2z5l_A 400 GQGAYAAANAALDALAERRRA-AGLPATSVAWGLWGGGGM----AAGAGE---ES-LS-----------RRGLRAMDPDA 459 (511)
T ss_dssp TBHHHHHHHHHHHHHHHHHHT-TTCCCEEEEECCBCSTTC----CCCHHH---HH-HH-----------HHTBCCBCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHH-cCCcEEEEECCcccCCcc----cccccH---HH-HH-----------hcCCCCCCHHH
Confidence 346899999999999987654 589999999998843221 111111 11 11 01234689999
Q ss_pred HHHHHHhhhccCCCCcEEecCCCccCHHHHHHHHHHh
Q 017290 248 CVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSF 284 (374)
Q Consensus 248 va~~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~ 284 (374)
+++++..++..+...++. . .+.|..+...+...
T Consensus 460 ~a~~l~~al~~~~~~v~v-~---~~d~~~~~~~~~~~ 492 (511)
T 2z5l_A 460 AVDALLGAMGRNDVCVTV-V---DVDWERFAPATNAI 492 (511)
T ss_dssp HHHHHHHHHHHTCSEEEE-C---CBCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEE-E---eCCHHHHHhhhccc
Confidence 999999999877654433 2 35677777665543
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-16 Score=140.80 Aligned_cols=221 Identities=15% Similarity=0.081 Sum_probs=153.5
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc-------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
|..++|++|||||++-||+++++.|++.|.+|++++|+....... ...++.++.+|+++.+++.++++
T Consensus 3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G 82 (258)
T 4gkb_A 3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG 82 (258)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 345779999999999999999999999999999999987642211 12356788999999888776654
Q ss_pred CCCEEEEcccccCCc--ccccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 90 GVDHVFNLAADMGGM--GFIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
++|++||+||..... +...++.+..+++|+.++..+.+++. +.+ .++|++||...+.
T Consensus 83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~---------------- 145 (258)
T 4gkb_A 83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVT---------------- 145 (258)
T ss_dssp CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHH----------------
T ss_pred CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhcc----------------
Confidence 799999999975432 22233455568899999888877653 333 4899999976542
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+......|+.+|...+.+.+.++.+ +|+++..+.||.+.-+...... .............. ..+.
T Consensus 146 -~~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~----------~~pl 214 (258)
T 4gkb_A 146 -GQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAA----------KVPL 214 (258)
T ss_dssp -CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHT----------TCTT
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHh----------cCCC
Confidence 1123468999999999999988765 4799999999999765321100 00000111111111 1111
Q ss_pred -ccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 240 -RSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 240 -~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.++...+|+|.+++.++... .+..+.+.+|-
T Consensus 215 g~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~ 250 (258)
T 4gkb_A 215 GRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGGY 250 (258)
T ss_dssp TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CCCCcCHHHHHHHHHHHhCchhcCccCCeEEECCCc
Confidence 35778999999999988653 36778887764
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.2e-17 Score=144.62 Aligned_cols=217 Identities=12% Similarity=0.042 Sum_probs=152.4
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+..++|+++||||++-||+++++.|++.|++|.+.+|+.....+. ...++..+.+|++|.+++.++++
T Consensus 5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 355789999999999999999999999999999999986532211 12246778899999988877764
Q ss_pred -CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHH-----hCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 -GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASR-----ISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~-----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+||......+.+ .+.+..+++|+.++..+.+++. +.+-.++|++||...+..
T Consensus 85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~------------ 152 (255)
T 4g81_D 85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAA------------ 152 (255)
T ss_dssp CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSB------------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCC------------
Confidence 7899999999765433333 3455678899999888877653 223348999999766432
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcH-HHHHHHHhccCCceEeeCCC
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAP-AAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 236 (374)
......|+.+|.....+.+.++.+ +|+++..+.||.+..+... ... .......+....
T Consensus 153 -----~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~-----~~~~~~~~~~~~~~~~-------- 214 (255)
T 4g81_D 153 -----RPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNT-----ALIEDKQFDSWVKSST-------- 214 (255)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGH-----HHHTCHHHHHHHHHHS--------
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhh-----cccCCHHHHHHHHhCC--------
Confidence 123467999999999999888765 4799999999999765210 000 001111111111
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
+...+...+|+|.+++.++... .+..+.+.+|
T Consensus 215 -Pl~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG 250 (255)
T 4g81_D 215 -PSQRWGRPEELIGTAIFLSSKASDYINGQIIYVDGG 250 (255)
T ss_dssp -TTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -CCCCCcCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence 1224567799999999888543 3677777765
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-16 Score=150.46 Aligned_cols=216 Identities=16% Similarity=0.026 Sum_probs=151.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc---cccccceeEEecccchhhHhhhcc-------C-CC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT---EDMFCHEFHLVDLRVMDNCLKVTK-------G-VD 92 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~i~~~~~dl~~~~~~~~~~~-------~-~d 92 (374)
...+++|||||+|.||.++++.|+++|++|++++|+...... ....++.++.+|++|.+.+..+++ + +|
T Consensus 211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id 290 (454)
T 3u0b_A 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVD 290 (454)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence 367899999999999999999999999999999986432111 112256789999999988877764 3 99
Q ss_pred EEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhC----CCCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 93 HVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRIS----GVKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 93 ~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~----~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
+|||+|+....... ...+.+..+.+|+.++.++.+++... +..+||++||...+. .
T Consensus 291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~-----------------g 353 (454)
T 3u0b_A 291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIA-----------------G 353 (454)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHH-----------------C
T ss_pred EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCC-----------------C
Confidence 99999997643222 22234557889999999999998765 455999999976542 1
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccc
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (374)
......|+.+|...+.+++.++.+ .++++.++.||.+..+.... .......... .......+
T Consensus 354 ~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~------~~~~~~~~~~---------~~~~l~r~ 418 (454)
T 3u0b_A 354 NRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEA------IPLATREVGR---------RLNSLFQG 418 (454)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------------CHHHH---------HSBTTSSC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhh------cchhhHHHHH---------hhccccCC
Confidence 223468999999888888887754 47999999999998763210 0000000000 00112345
Q ss_pred eeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 243 TFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
...+|+|++++.++... .+.++++.++..
T Consensus 419 g~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~ 451 (454)
T 3u0b_A 419 GQPVDVAELIAYFASPASNAVTGNTIRVCGQAM 451 (454)
T ss_dssp BCHHHHHHHHHHHHCGGGTTCCSCEEEESSSBS
T ss_pred CCHHHHHHHHHHHhCCccCCCCCcEEEECCccc
Confidence 68899999999988653 367788876543
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.70 E-value=4e-17 Score=148.37 Aligned_cols=214 Identities=15% Similarity=0.023 Sum_probs=143.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccch-hhHhhhcc------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVM-DNCLKVTK------ 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~-~~~~~~~~------ 89 (374)
..+++||||||+|.||+++++.|+++|++|++++|+....... ....+.++.+|+++. +.+..+++
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 4668999999999999999999999999999999986532111 112578899999998 66655543
Q ss_pred -CCCEEEEcccccCCc---------------------------------ccccCCcceehhhhHHHHHHHHHHHH----h
Q 017290 90 -GVDHVFNLAADMGGM---------------------------------GFIQSNHSVIMYNNTMISFNMLEASR----I 131 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~---------------------------------~~~~~~~~~~~~~n~~~~~~ll~a~~----~ 131 (374)
++|+|||+||..... .......+..+++|+.++..+++++. +
T Consensus 90 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~ 169 (311)
T 3o26_A 90 GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQL 169 (311)
T ss_dssp SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhcc
Confidence 799999999975310 00111234458899999888888764 3
Q ss_pred CCCCeEEEeecccccCCCcccc---------------------------cccCCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 132 SGVKRFFYASSACIYPEFKQLE---------------------------TNVSLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 132 ~~~~~~i~~Ss~~vy~~~~~~~---------------------------~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
.+..++|++||...+....... ......+... ...+...|+.+|...+.+++
T Consensus 170 ~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~SK~a~~~~~~ 248 (311)
T 3o26_A 170 SDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNG-WPSFGAAYTTSKACLNAYTR 248 (311)
T ss_dssp SSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTT-CCSSCHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhcccccccc-CcccchhhHHHHHHHHHHHH
Confidence 4456999999976653211000 0000011110 11234679999999999999
Q ss_pred HHHhhh-CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC---C
Q 017290 185 HYTKDF-GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD---F 260 (374)
Q Consensus 185 ~~~~~~-~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~---~ 260 (374)
.++.+. ++.+.+++||.|..+... . ......++.++.++.++..+ .
T Consensus 249 ~la~e~~~i~v~~v~PG~v~T~~~~------------------~------------~~~~~~~~~a~~~~~~~~~~~~~~ 298 (311)
T 3o26_A 249 VLANKIPKFQVNCVCPGLVKTEMNY------------------G------------IGNYTAEEGAEHVVRIALFPDDGP 298 (311)
T ss_dssp HHHHHCTTSEEEEECCCSBCSGGGT------------------T------------CCSBCHHHHHHHHHHHHTCCSSCC
T ss_pred HHHhhcCCceEEEecCCceecCCcC------------------C------------CCCCCHHHHHHHHHHHHhCCCCCC
Confidence 998875 599999999998754210 0 01246788888888877654 2
Q ss_pred CCcEEecC
Q 017290 261 REPVNIGS 268 (374)
Q Consensus 261 ~~~~~i~~ 268 (374)
++.|...+
T Consensus 299 ~g~~~~~s 306 (311)
T 3o26_A 299 SGFFYDCS 306 (311)
T ss_dssp CSCEETC-
T ss_pred CceEeccc
Confidence 45555443
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.69 E-value=4e-16 Score=135.28 Aligned_cols=217 Identities=17% Similarity=0.117 Sum_probs=153.6
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc----cccccceeEEecccchhhHhhhcc--CCCEEE
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT----EDMFCHEFHLVDLRVMDNCLKVTK--GVDHVF 95 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi 95 (374)
+..++|+++||||++-||+++++.|++.|.+|.+.+|+..+... .....+..+.+|++|.+.+..+++ ++|++|
T Consensus 5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLV 84 (247)
T 4hp8_A 5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILV 84 (247)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEE
T ss_pred cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence 34578999999999999999999999999999999998642111 112246788999999998888876 799999
Q ss_pred EcccccCCcc---cccCCcceehhhhHHHHHHHHHHHH----hCC-CCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 96 NLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASR----ISG-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 96 ~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~----~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
|+||...... ....+++..+++|+.++..+.+++. +.+ -.++|++||...+.. ..
T Consensus 85 NNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g-----------------~~ 147 (247)
T 4hp8_A 85 NNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQG-----------------GI 147 (247)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------------CS
T ss_pred ECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCC-----------------CC
Confidence 9999765332 2333456678999999888887643 233 248999999765421 12
Q ss_pred CCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHH-HHHHHHhccCCceEeeCCCcccccce
Q 017290 168 PQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPA-AFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
....|..+|.....+.+.++.+ .|+++..+.||.+--+... .... ......+... .+...+.
T Consensus 148 ~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~-----~~~~~~~~~~~~~~~---------~PlgR~g 213 (247)
T 4hp8_A 148 RVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTE-----ALRADAARNKAILER---------IPAGRWG 213 (247)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH-----HHHTSHHHHHHHHTT---------CTTSSCB
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchh-----hcccCHHHHHHHHhC---------CCCCCCc
Confidence 3458999999999999888765 4799999999999755210 0000 0111111111 1233467
Q ss_pred eHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 244 FIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
..+|+|.+++.++... .+..+.+.+|
T Consensus 214 ~peeiA~~v~fLaSd~a~~iTG~~i~VDGG 243 (247)
T 4hp8_A 214 HSEDIAGAAVFLSSAAADYVHGAILNVDGG 243 (247)
T ss_dssp CTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCchhcCCcCCeEEECcc
Confidence 7899999999988654 3677777765
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=5e-16 Score=140.34 Aligned_cols=219 Identities=8% Similarity=-0.042 Sum_probs=142.2
Q ss_pred CCCCCeEEEEcCc--chhHHHHHHHHHhCCCEEEEEeCCC-----------Cccccccc---cc----ceeEEe------
Q 017290 23 PSEKLRISVTGAG--GFIASHIARRLKSEGHYIIASDWKK-----------NEHMTEDM---FC----HEFHLV------ 76 (374)
Q Consensus 23 ~~~~~~ilItGat--G~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~~~~---~~----i~~~~~------ 76 (374)
.+.+|++|||||+ |.||+++++.|+++|++|++++|++ ........ .. ...+..
T Consensus 5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (297)
T 1d7o_A 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN 84 (297)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccc
Confidence 3466899999999 9999999999999999999987531 11110000 00 122222
Q ss_pred ------cccc--------hhhHhhhc-------cCCCEEEEcccccC--C---cccccCCcceehhhhHHHHHHHHHHHH
Q 017290 77 ------DLRV--------MDNCLKVT-------KGVDHVFNLAADMG--G---MGFIQSNHSVIMYNNTMISFNMLEASR 130 (374)
Q Consensus 77 ------dl~~--------~~~~~~~~-------~~~d~vi~~a~~~~--~---~~~~~~~~~~~~~~n~~~~~~ll~a~~ 130 (374)
|+++ .+.+..++ .++|++||+|+... . .+....+.+..+++|+.++..+++++.
T Consensus 85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 164 (297)
T 1d7o_A 85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL 164 (297)
T ss_dssp GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 2222 33444433 27899999998532 1 112223345678899999999999987
Q ss_pred hCC--CCeEEEeecccccCCCcccccccCCCCCCCCCCCCC-CchHHhHHHHHHHHHHHHhh----hCCcEEEEeeCccc
Q 017290 131 ISG--VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ-DAYGLEKLASEELCKHYTKD----FGIECRVGRFHNIY 203 (374)
Q Consensus 131 ~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~-~~y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~ 203 (374)
..- ..++|++||...+.. .... ..|+.+|...+.+.+.++.+ .++++.+++||.+.
T Consensus 165 ~~m~~~g~iv~isS~~~~~~-----------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~ 227 (297)
T 1d7o_A 165 PIMNPGGASISLTYIASERI-----------------IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLG 227 (297)
T ss_dssp GGEEEEEEEEEEECGGGTSC-----------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCB
T ss_pred HHhccCceEEEEeccccccC-----------------CCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccc
Confidence 541 148999999765421 1122 47999999999999988765 58999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 204 GPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 204 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
.+.... ......+...... .. ....+...+|+|++++.++... .+..+++.++..
T Consensus 228 T~~~~~---~~~~~~~~~~~~~-~~---------p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~ 286 (297)
T 1d7o_A 228 SRAAKA---IGFIDTMIEYSYN-NA---------PIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN 286 (297)
T ss_dssp CCCSSC---CSHHHHHHHHHHH-HS---------SSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred cchhhh---ccccHHHHHHhhc-cC---------CCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCce
Confidence 875321 1112222222211 11 1124578999999999988653 367788887643
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.5e-16 Score=139.21 Aligned_cols=219 Identities=11% Similarity=0.006 Sum_probs=151.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
++|.+|||||++-||+++++.|++.|++|++++|+....... ...+...+.+|++|.+++.++++ ++|++
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL 107 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL 107 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 568999999999999999999999999999999986542221 12245778999999998887764 78999
Q ss_pred EEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 95 FNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 95 i~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
|++||......+ ...+++..+++|+.++..+.+++...= -.++|++||...+. +....
T Consensus 108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~-----------------~~~~~ 170 (273)
T 4fgs_A 108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGST-----------------GTPAF 170 (273)
T ss_dssp EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGS-----------------CCTTC
T ss_pred EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhcc-----------------CCCCc
Confidence 999997543322 333456678999999999988875421 12799999976542 11234
Q ss_pred CchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCC-CCCcH-HHHHHHHhccCCceEeeCCCccccccee
Q 017290 170 DAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKG-MEKAP-AAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
..|+.+|.....+.+.++.+. |+++..+.||.+.-+.-.... ....- ..+...... . .+.-.+..
T Consensus 171 ~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~-~---------~PlgR~g~ 240 (273)
T 4fgs_A 171 SVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAA-Q---------VPMGRVGR 240 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHH-H---------STTSSCBC
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHh-c---------CCCCCCcC
Confidence 689999999999999988664 689999999998765321100 00001 111111111 1 11224678
Q ss_pred HHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 245 IDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.+|+|.+++.++... .+..+.+.+|.
T Consensus 241 peeiA~~v~FLaSd~a~~iTG~~i~VDGG~ 270 (273)
T 4fgs_A 241 AEEVAAAALFLASDDSSFVTGAELFVDGGS 270 (273)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHHHHhCchhcCccCCeEeECcCh
Confidence 899999999988654 36777777654
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=3.5e-16 Score=142.55 Aligned_cols=259 Identities=14% Similarity=0.065 Sum_probs=163.8
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC---------cccc----cccccceeEEecccchhhHhhhc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN---------EHMT----EDMFCHEFHLVDLRVMDNCLKVT 88 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~~----~~~~~i~~~~~dl~~~~~~~~~~ 88 (374)
+...+|+++||||+|+||+++++.|+++|++|+++++... .... ....+ ....+|+.+.+.+..++
T Consensus 5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~-~~~~~D~~~~~~~~~~~ 83 (319)
T 1gz6_A 5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG-GKAVANYDSVEAGEKLV 83 (319)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT-CEEEEECCCGGGHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhC-CeEEEeCCCHHHHHHHH
Confidence 3456789999999999999999999999999999876421 1000 00001 12357888877665543
Q ss_pred -------cCCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccc-cCCCcccc
Q 017290 89 -------KGVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACI-YPEFKQLE 153 (374)
Q Consensus 89 -------~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~v-y~~~~~~~ 153 (374)
.++|++||+||...... ....+.+..+++|+.++..+++++ ++.+..++|++||... ++.
T Consensus 84 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~----- 158 (319)
T 1gz6_A 84 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN----- 158 (319)
T ss_dssp HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC-----
Confidence 37999999999754221 122344567889999988888776 4455569999999643 321
Q ss_pred cccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCce
Q 017290 154 TNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKF 230 (374)
Q Consensus 154 ~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (374)
.+...|+.+|...+.+.+.++.+ .++++.+++||.+ .+.. .....
T Consensus 159 -------------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~-----~~~~~------------- 206 (319)
T 1gz6_A 159 -------------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT-----ETVMP------------- 206 (319)
T ss_dssp -------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT-----GGGSC-------------
T ss_pred -------------CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc-----cccCC-------------
Confidence 23468999999999999998765 4799999999986 3210 00000
Q ss_pred EeeCCCcccccceeHHHHHHHHHhhhccC---CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCCCcccccch
Q 017290 231 EMWGDGLQTRSFTFIDECVEGVLRLTKSD---FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDN 307 (374)
Q Consensus 231 ~~~~~~~~~~~~i~~~Dva~~i~~~~~~~---~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~d~ 307 (374)
.....+++.+|+|.+++.++..+ .+..|+++++...... +.+..|. ..+ ......|.
T Consensus 207 ------~~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG~~~~~~-----~~~~~~~-----~~~----~~~~~~~~ 266 (319)
T 1gz6_A 207 ------EDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLR-----WERTLGA-----IVR----KRNQPMTP 266 (319)
T ss_dssp ------HHHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTEEEEEE-----EEECCCE-----ECC----BTTBCCCH
T ss_pred ------hhhhccCCHHHHHHHHHHHhCchhhcCCCEEEECCCeEEEEe-----eeeccce-----ecc----CCCCCCCH
Confidence 01123467889999999888654 3667777765321110 0000000 000 00122333
Q ss_pred HHHHH-------hcCCCcCCCHHHHHHHHHHHHHHhhh
Q 017290 308 TLIKE-------KLGWAPSMKLKDGLRITYFWIKEQIE 338 (374)
Q Consensus 308 ~k~~~-------~lg~~p~~~~~~~l~~~~~~~~~~~~ 338 (374)
+..++ ..++....++.+.+++++++..+...
T Consensus 267 ~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (319)
T 1gz6_A 267 EAVRDNWVKICDFSNASKPKSIQESTGGIIEVLHKIDS 304 (319)
T ss_dssp HHHHHTHHHHTCCTTCBCCCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHhhccccccCCCchHHHHHHHHHHHhhccc
Confidence 33332 23555447899999999987765544
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.6e-15 Score=133.97 Aligned_cols=218 Identities=11% Similarity=-0.021 Sum_probs=149.4
Q ss_pred CCCCCCeEEEEcCcc--hhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc---
Q 017290 22 WPSEKLRISVTGAGG--FIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK--- 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~--- 89 (374)
+..++|+++||||+| -||.++++.|++.|++|++.+|+....... ...++.++.+|+++.+++.++++
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG 81 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 455789999999887 799999999999999999999986542211 12256788999999988877664
Q ss_pred ----CCCEEEEcccccCCccc----ccCCc---ceehhhhHHHHHHHHHHHHhCCC--CeEEEeecccccCCCccccccc
Q 017290 90 ----GVDHVFNLAADMGGMGF----IQSNH---SVIMYNNTMISFNMLEASRISGV--KRFFYASSACIYPEFKQLETNV 156 (374)
Q Consensus 90 ----~~d~vi~~a~~~~~~~~----~~~~~---~~~~~~n~~~~~~ll~a~~~~~~--~~~i~~Ss~~vy~~~~~~~~~~ 156 (374)
++|++||+|+....... .+... ...+++|+.+...+..++...-. .++|++||....-
T Consensus 82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~--------- 152 (256)
T 4fs3_A 82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEF--------- 152 (256)
T ss_dssp HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTS---------
T ss_pred HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccccc---------
Confidence 79999999996532111 11121 22356777777777766654322 2899999975532
Q ss_pred CCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEee
Q 017290 157 SLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMW 233 (374)
Q Consensus 157 ~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (374)
+......|+.+|...+.+.+.++.+ .|+++..+.||.+-.+.... ......+...... ..
T Consensus 153 --------~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~---~~~~~~~~~~~~~-~~----- 215 (256)
T 4fs3_A 153 --------AVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKG---VGGFNTILKEIKE-RA----- 215 (256)
T ss_dssp --------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTT---CTTHHHHHHHHHH-HS-----
T ss_pred --------CcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhh---ccCCHHHHHHHHh-cC-----
Confidence 2223468999999999999888765 47999999999987653221 1112233333222 11
Q ss_pred CCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 234 GDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 234 ~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
+...+...+|+|.+++.++... .+.++.+.+|
T Consensus 216 ----Pl~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG 251 (256)
T 4fs3_A 216 ----PLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG 251 (256)
T ss_dssp ----TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ----CCCCCcCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence 1224678899999999988653 3677777765
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=4.7e-15 Score=142.06 Aligned_cols=201 Identities=12% Similarity=0.070 Sum_probs=145.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc---------ccccceeEEecccchhhHhhhcc-----
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE---------DMFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---------~~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
+++++|||||+|.||.++++.|+++|+ .|++++|+....... ....+.++.+|++|.+.+..+++
T Consensus 238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 317 (496)
T 3mje_A 238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED 317 (496)
T ss_dssp CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 458999999999999999999999998 788888874322111 12257889999999999888875
Q ss_pred -CCCEEEEccccc-CCccc---ccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 90 -GVDHVFNLAADM-GGMGF---IQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 90 -~~d~vi~~a~~~-~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
++|+|||+|+.. ..... ...+....+..|+.++.++.+++......+||++||...+-.
T Consensus 318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g---------------- 381 (496)
T 3mje_A 318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWG---------------- 381 (496)
T ss_dssp SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTT----------------
T ss_pred CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCC----------------
Confidence 479999999976 22111 222345678899999999999999888889999999655321
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccccee
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
......|+.+|...+.+.+.+.. .+++++++.||.+.+.+... . ......... . ....+.
T Consensus 382 -~~g~~~YaAaKa~ldala~~~~~-~Gi~v~sV~pG~w~~~gm~~---~---~~~~~~l~~---------~---g~~~l~ 441 (496)
T 3mje_A 382 -SGGQPGYAAANAYLDALAEHRRS-LGLTASSVAWGTWGEVGMAT---D---PEVHDRLVR---------Q---GVLAME 441 (496)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHH-TTCCCEEEEECEESSSCC------------CHHHHH---------T---TEEEEC
T ss_pred -CCCcHHHHHHHHHHHHHHHHHHh-cCCeEEEEECCcccCCcccc---C---hHHHHHHHh---------c---CCCCCC
Confidence 12346899999999999887654 59999999999887654210 0 001111111 0 123467
Q ss_pred HHHHHHHHHhhhccCCC
Q 017290 245 IDECVEGVLRLTKSDFR 261 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~~~ 261 (374)
.++.+.++..++..+..
T Consensus 442 pe~~~~~l~~~l~~~~~ 458 (496)
T 3mje_A 442 PEHALGALDQMLENDDT 458 (496)
T ss_dssp HHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCCc
Confidence 88999999999887654
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.59 E-value=5.6e-15 Score=134.84 Aligned_cols=225 Identities=10% Similarity=-0.007 Sum_probs=123.9
Q ss_pred CCCCCeEEEEcC--cchhHHHHHHHHHhCCCEEEEEeCCC-----------Cccccc---------------ccc-----
Q 017290 23 PSEKLRISVTGA--GGFIASHIARRLKSEGHYIIASDWKK-----------NEHMTE---------------DMF----- 69 (374)
Q Consensus 23 ~~~~~~ilItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~~---------------~~~----- 69 (374)
.+.++++||||| +|.||+++++.|+++|++|++++|++ ...... ...
T Consensus 6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (319)
T 2ptg_A 6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV 85 (319)
T ss_dssp CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence 345689999999 89999999999999999999998642 110000 000
Q ss_pred cceeEEec------------ccc--------hhhHhhhc-------cCCCEEEEcccccC--Cc---ccccCCcceehhh
Q 017290 70 CHEFHLVD------------LRV--------MDNCLKVT-------KGVDHVFNLAADMG--GM---GFIQSNHSVIMYN 117 (374)
Q Consensus 70 ~i~~~~~d------------l~~--------~~~~~~~~-------~~~d~vi~~a~~~~--~~---~~~~~~~~~~~~~ 117 (374)
...++..| +++ .+.+..++ .++|++||+|+... .. +....+.+..+++
T Consensus 86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~v 165 (319)
T 2ptg_A 86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSS 165 (319)
T ss_dssp CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHH
T ss_pred ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhH
Confidence 01333333 332 22344333 27899999998542 11 1222234557889
Q ss_pred hHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCCCCCCCCCCC-CchHHhHHHHHHHHHHHHhh----h
Q 017290 118 NTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ-DAYGLEKLASEELCKHYTKD----F 190 (374)
Q Consensus 118 n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~-~~y~~sK~~~E~~~~~~~~~----~ 190 (374)
|+.++..+++++...= -.++|++||...+.. .... ..|+.+|...+.+.+.++.+ .
T Consensus 166 N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~-----------------~~~~~~~Y~asKaal~~l~~~la~el~~~~ 228 (319)
T 2ptg_A 166 SSYSFVSLLQHFLPLMKEGGSALALSYIASEKV-----------------IPGYGGGMSSAKAALESDCRTLAFEAGRAR 228 (319)
T ss_dssp HTHHHHHHHHHHGGGEEEEEEEEEEEECC-----------------------------------THHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhcCceEEEEeccccccc-----------------cCccchhhHHHHHHHHHHHHHHHHHhcccc
Confidence 9999999999886541 148999999765421 1112 47999999999999888754 5
Q ss_pred CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEe
Q 017290 191 GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNI 266 (374)
Q Consensus 191 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i 266 (374)
++++.+++||.+..+........ ....+..... ..+........+...+|+|++++.++... .+..+.+
T Consensus 229 gIrvn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~------~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~v 301 (319)
T 2ptg_A 229 AVRVNCISAGPLKSRAASAIGKA-GDKTFIDLAI------DYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYV 301 (319)
T ss_dssp CCEEEEEEECCCC--------------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred CeeEEEEeeCCccChhhhhcccc-cchhhHHHHH------HHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEE
Confidence 89999999999976531100000 0000000000 00001112234678999999999988753 3677888
Q ss_pred cCCCc
Q 017290 267 GSDEM 271 (374)
Q Consensus 267 ~~~~~ 271 (374)
.++..
T Consensus 302 dGG~~ 306 (319)
T 2ptg_A 302 DNGLH 306 (319)
T ss_dssp STTCT
T ss_pred CCCce
Confidence 77644
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.2e-14 Score=141.76 Aligned_cols=206 Identities=15% Similarity=-0.004 Sum_probs=135.2
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC---------Ccccccc---cccceeEEecccchhhHhhhcc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK---------NEHMTED---MFCHEFHLVDLRVMDNCLKVTK 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~ 89 (374)
+...++++|||||+|.||+++++.|+++|++|++++|.. ....... ........+|+.+.+.+.++++
T Consensus 15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~ 94 (613)
T 3oml_A 15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIE 94 (613)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHH
Confidence 445779999999999999999999999999999998832 1111000 0011234578888877766654
Q ss_pred -------CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccc
Q 017290 90 -------GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETN 155 (374)
Q Consensus 90 -------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~ 155 (374)
++|++||+||...... ....+.+..+++|+.++..+++++ ++.+..++|++||...+-
T Consensus 95 ~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~-------- 166 (613)
T 3oml_A 95 TAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY-------- 166 (613)
T ss_dssp ----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHH--------
T ss_pred HHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC--------
Confidence 6899999999764322 223345567889999999998877 445556999999965432
Q ss_pred cCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEe
Q 017290 156 VSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEM 232 (374)
Q Consensus 156 ~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (374)
+......|+.+|...+.+.+.++.+. ++.+.++.|+.+-... ....
T Consensus 167 ---------~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~------~~~~---------------- 215 (613)
T 3oml_A 167 ---------GNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMT------EGIL---------------- 215 (613)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------CCCC----------------
T ss_pred ---------CCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhh------hhcc----------------
Confidence 11234689999999999999887654 7999999998542110 0000
Q ss_pred eCCCcccccceeHHHHHHHHHhhhccC---CCCcEEecCC
Q 017290 233 WGDGLQTRSFTFIDECVEGVLRLTKSD---FREPVNIGSD 269 (374)
Q Consensus 233 ~~~~~~~~~~i~~~Dva~~i~~~~~~~---~~~~~~i~~~ 269 (374)
.......+..+|+|.+++.++... .+.++++.+|
T Consensus 216 ---~~~~~~~~~pedvA~~v~~L~s~~~~~tG~~i~vdGG 252 (613)
T 3oml_A 216 ---PDILFNELKPKLIAPVVAYLCHESCEDNGSYIESAAG 252 (613)
T ss_dssp ---CHHHHTTCCGGGTHHHHHHTTSTTCCCCSCEEEEETT
T ss_pred ---chhhhhcCCHHHHHHHHHHhcCCCcCCCceEEEECCC
Confidence 011233457789999999888654 3566666554
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.52 E-value=8.6e-14 Score=127.44 Aligned_cols=163 Identities=10% Similarity=0.000 Sum_probs=115.1
Q ss_pred CCeEEEEcCcc--hhHHHHHHHHHhCCCEEEEEeCCC---------Cc------ccc---cccccceeEEecccch--h-
Q 017290 26 KLRISVTGAGG--FIASHIARRLKSEGHYIIASDWKK---------NE------HMT---EDMFCHEFHLVDLRVM--D- 82 (374)
Q Consensus 26 ~~~ilItGatG--~iG~~l~~~L~~~g~~V~~~~r~~---------~~------~~~---~~~~~i~~~~~dl~~~--~- 82 (374)
.++++||||++ .||.+++++|+++|++|++..|++ .. ... .....+.++.+|+.+. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 57899999875 999999999999999999776553 10 000 0111346777788766 5
Q ss_pred -----------------hHhhhcc-------CCCEEEEcccccC--Cc---ccccCCcceehhhhHHHHHHHHHHHHhCC
Q 017290 83 -----------------NCLKVTK-------GVDHVFNLAADMG--GM---GFIQSNHSVIMYNNTMISFNMLEASRISG 133 (374)
Q Consensus 83 -----------------~~~~~~~-------~~d~vi~~a~~~~--~~---~~~~~~~~~~~~~n~~~~~~ll~a~~~~~ 133 (374)
.+..+++ ++|++||+||... .. .....+....+++|+.++..+++++...=
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 5554442 6899999999631 11 12223345678899999999998876532
Q ss_pred C--CeEEEeecccccCCCcccccccCCCCCCCCCCCCCC-chHHhHHHHHHHHHHHHhh----hCCcEEEEeeCcccCC
Q 017290 134 V--KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD-AYGLEKLASEELCKHYTKD----FGIECRVGRFHNIYGP 205 (374)
Q Consensus 134 ~--~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~-~y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~g~ 205 (374)
. .++|++||...+.. ..... .|+.+|...+.+.+.++.+ .++.+..+.||.+..+
T Consensus 162 ~~~g~Iv~isS~~~~~~-----------------~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 162 KPQSSIISLTYHASQKV-----------------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp EEEEEEEEEECGGGTSC-----------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred hhCCeEEEEeCccccCC-----------------CCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence 1 38999999765421 11233 8999999999998887654 4899999999998754
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.51 E-value=7.3e-14 Score=135.30 Aligned_cols=219 Identities=13% Similarity=0.016 Sum_probs=151.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCE-EEEE-eCCCCc----------cccc---------ccccceeEEecccchhh
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHY-IIAS-DWKKNE----------HMTE---------DMFCHEFHLVDLRVMDN 83 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~-V~~~-~r~~~~----------~~~~---------~~~~i~~~~~dl~~~~~ 83 (374)
..+++|||||+|.||.++++.|+++|+. |+++ +|+... .... ....+.++.+|++|.+.
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~ 329 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA 329 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence 5689999999999999999999999987 5555 777422 0100 11257889999999999
Q ss_pred Hhhhcc------CCCEEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHHHhCC-----CCeEEEeecccccCCC
Q 017290 84 CLKVTK------GVDHVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASRISG-----VKRFFYASSACIYPEF 149 (374)
Q Consensus 84 ~~~~~~------~~d~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~~~~-----~~~~i~~Ss~~vy~~~ 149 (374)
+..+++ .+|+|||+||........ ..+.+..+.+|+.++.++.+++.... ..+||++||...+-.
T Consensus 330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g- 408 (525)
T 3qp9_A 330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG- 408 (525)
T ss_dssp HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC-
T ss_pred HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC-
Confidence 888875 469999999976432222 22345578899999999999988765 679999999765422
Q ss_pred cccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCc
Q 017290 150 KQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDK 229 (374)
Q Consensus 150 ~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (374)
......|+.+|...+.+...+.. .+++++++.||.+-.... ...... ..+..
T Consensus 409 ----------------~~g~~~YaaaKa~l~~lA~~~~~-~gi~v~sI~pG~~~tgm~----~~~~~~----~~~~~--- 460 (525)
T 3qp9_A 409 ----------------GAGQGAYAAGTAFLDALAGQHRA-DGPTVTSVAWSPWEGSRV----TEGATG----ERLRR--- 460 (525)
T ss_dssp ----------------CTTCHHHHHHHHHHHHHHTSCCS-SCCEEEEEEECCBTTSGG----GSSHHH----HHHHH---
T ss_pred ----------------CCCCHHHHHHHHHHHHHHHHHHh-CCCCEEEEECCccccccc----cchhhH----HHHHh---
Confidence 12346899999999988766544 489999999999922210 011111 11110
Q ss_pred eEeeCCCcccccceeHHHHHHHHHhhhccCCCCcEEecCCCccCHHHHHHHHHHh
Q 017290 230 FEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSF 284 (374)
Q Consensus 230 ~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~ 284 (374)
.....+..+++++++..++..+...+... .+.|..+...+...
T Consensus 461 --------~g~~~l~pee~a~~l~~~l~~~~~~v~v~----~~dw~~~~~~~~~~ 503 (525)
T 3qp9_A 461 --------LGLRPLAPATALTALDTALGHGDTAVTIA----DVDWSSFAPGFTTA 503 (525)
T ss_dssp --------TTBCCBCHHHHHHHHHHHHHHTCSEEEEC----CBCHHHHHHHHHSS
T ss_pred --------cCCCCCCHHHHHHHHHHHHhCCCCeEEEE----eCCHHHHHhhcccc
Confidence 01235789999999999998876544332 35566666655433
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=4.9e-14 Score=128.30 Aligned_cols=221 Identities=11% Similarity=-0.046 Sum_probs=137.9
Q ss_pred CCCCCeEEEEcC--cchhHHHHHHHHHhCCCEEEEEeCCC-----------Cccc---ccccc----cceeEEe------
Q 017290 23 PSEKLRISVTGA--GGFIASHIARRLKSEGHYIIASDWKK-----------NEHM---TEDMF----CHEFHLV------ 76 (374)
Q Consensus 23 ~~~~~~ilItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~---~~~~~----~i~~~~~------ 76 (374)
...+|++||||| +|.||+++++.|+++|++|++++|++ .... ..... ...++.+
T Consensus 6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 85 (315)
T 2o2s_A 6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK 85 (315)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSS
T ss_pred cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence 345689999999 89999999999999999999998642 0000 00000 0133333
Q ss_pred ------cccc--------hhhHhhhc-------cCCCEEEEcccccC--Cc---ccccCCcceehhhhHHHHHHHHHHHH
Q 017290 77 ------DLRV--------MDNCLKVT-------KGVDHVFNLAADMG--GM---GFIQSNHSVIMYNNTMISFNMLEASR 130 (374)
Q Consensus 77 ------dl~~--------~~~~~~~~-------~~~d~vi~~a~~~~--~~---~~~~~~~~~~~~~n~~~~~~ll~a~~ 130 (374)
|+++ .+.+..++ .++|++||+|+... .. +....+.+..+++|+.++..+++++.
T Consensus 86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 165 (315)
T 2o2s_A 86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFG 165 (315)
T ss_dssp TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHS
T ss_pred cchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 3332 33444433 37999999999642 11 12223345678899999999999886
Q ss_pred hCC--CCeEEEeecccccCCCcccccccCCCCCCCCCCCCC-CchHHhHHHHHHHHHHHHhh----hCCcEEEEeeCccc
Q 017290 131 ISG--VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ-DAYGLEKLASEELCKHYTKD----FGIECRVGRFHNIY 203 (374)
Q Consensus 131 ~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~-~~y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~ 203 (374)
..- -.++|++||...+... ... ..|+.+|...+.+.+.++.+ .++++.+++||.+.
T Consensus 166 ~~m~~~g~Iv~isS~~~~~~~-----------------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~ 228 (315)
T 2o2s_A 166 PIMNEGGSAVTLSYLAAERVV-----------------PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLK 228 (315)
T ss_dssp TTEEEEEEEEEEEEGGGTSCC-----------------TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCC
T ss_pred HHHhcCCEEEEEecccccccC-----------------CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEeccccc
Confidence 531 1489999997654211 112 47999999999999888754 47999999999986
Q ss_pred CCCCCCCC---CCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 204 GPFGTWKG---MEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 204 g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.+...... .......+...... . .+...+...+|+|.+++.++... .+..+.+.++.
T Consensus 229 T~~~~~~~~~~~~~~~~~~~~~~~~-~---------~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 292 (315)
T 2o2s_A 229 SRAASAIGKSGEKSFIDYAIDYSYN-N---------APLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL 292 (315)
T ss_dssp CHHHHHTTCSSSSCHHHHHHHHHHH-H---------SSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred chhhhhccccccchhHHHHHHHHhc-c---------CCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence 54100000 00000111111000 0 01123578899999999988653 36677777664
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.33 E-value=3.2e-11 Score=118.75 Aligned_cols=205 Identities=15% Similarity=0.121 Sum_probs=133.4
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc--ccc--cccceeEEecc-cchhhHhh-h---ccCCCE
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM--TED--MFCHEFHLVDL-RVMDNCLK-V---TKGVDH 93 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~--~~~i~~~~~dl-~~~~~~~~-~---~~~~d~ 93 (374)
..+++.++||||++-||+++++.|+++|++|++.+|...... ... ...+..+.+|+ .+.+.+.+ + +.++|+
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDi 398 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDI 398 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCE
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCE
Confidence 345688999999999999999999999999999886432110 000 11244566787 55443322 2 347999
Q ss_pred EEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 94 VFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 94 vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
+||+||...... ....+.+..+++|+.++..+.+++. +.+-.++|++||...+- +.
T Consensus 399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~-----------------~~ 461 (604)
T 2et6_A 399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIY-----------------GN 461 (604)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS-----------------CC
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc-----------------CC
Confidence 999999754222 2223455678999999888877653 33434899999965431 11
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
.....|+.+|.....+.+.++.+ .++++..+.|+. -.+ +..... . .. .....
T Consensus 462 ~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~---------m~~~~~----~-~~----------~~~~~ 516 (604)
T 2et6_A 462 FGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETA---------MTLSIM----R-EQ----------DKNLY 516 (604)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCC---------C------------------------CCSS
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCc---------cccccC----c-hh----------hccCC
Confidence 12357999999999999888765 479999999983 211 000000 0 00 01234
Q ss_pred eHHHHHHHHHhhhccC---CCCcEEecCC
Q 017290 244 FIDECVEGVLRLTKSD---FREPVNIGSD 269 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~---~~~~~~i~~~ 269 (374)
..+|+|.+++.++... .+.++.+.++
T Consensus 517 ~pe~vA~~v~~L~s~~~~itG~~~~vdGG 545 (604)
T 2et6_A 517 HADQVAPLLVYLGTDDVPVTGETFEIGGG 545 (604)
T ss_dssp CGGGTHHHHHHTTSTTCCCCSCEEEEETT
T ss_pred CHHHHHHHHHHHhCCccCCCCcEEEECCC
Confidence 6789999999887653 3556666554
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=2.7e-11 Score=129.21 Aligned_cols=220 Identities=14% Similarity=0.060 Sum_probs=143.8
Q ss_pred CCCCCeEEEEcCcch-hHHHHHHHHHhCCCEEEEEeCC-CCcccc----c------ccccceeEEecccchhhHhhhcc-
Q 017290 23 PSEKLRISVTGAGGF-IASHIARRLKSEGHYIIASDWK-KNEHMT----E------DMFCHEFHLVDLRVMDNCLKVTK- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~-iG~~l~~~L~~~g~~V~~~~r~-~~~~~~----~------~~~~i~~~~~dl~~~~~~~~~~~- 89 (374)
...++++|||||+|. ||.++++.|++.|++|++++++ ...... . ....+.++.+|++|.+.+..+++
T Consensus 649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~ 728 (1878)
T 2uv9_A 649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY 728 (1878)
T ss_dssp CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence 456789999999999 9999999999999999998644 322110 0 02246788999999988877653
Q ss_pred ----------CCCEEEEcccccCCc-cccc-----CCcceehhhhHHHHHHHHHHHHh--C----CCCeEEEeecccccC
Q 017290 90 ----------GVDHVFNLAADMGGM-GFIQ-----SNHSVIMYNNTMISFNMLEASRI--S----GVKRFFYASSACIYP 147 (374)
Q Consensus 90 ----------~~d~vi~~a~~~~~~-~~~~-----~~~~~~~~~n~~~~~~ll~a~~~--~----~~~~~i~~Ss~~vy~ 147 (374)
++|+|||+||..... ...+ .+....+.+|+.++..++.+++. . +..+||++||...+.
T Consensus 729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~ 808 (1878)
T 2uv9_A 729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF 808 (1878)
T ss_dssp HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence 589999999975322 1222 23456788999999888876432 1 123899999965421
Q ss_pred CCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh-h--CCcEEEEeeCccc-CCCCCCCCCCCcHHHHHHHH
Q 017290 148 EFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD-F--GIECRVGRFHNIY-GPFGTWKGMEKAPAAFCRKA 223 (374)
Q Consensus 148 ~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~-~--~~~~~ilR~~~v~-g~~~~~~~~~~~~~~~~~~~ 223 (374)
+ ....|+.+|...+.+++.+..+ . .++++.+.||.+- .+.. .. .......
T Consensus 809 -----------------g--g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~------~~-~~~~~~~ 862 (1878)
T 2uv9_A 809 -----------------G--NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLM------SA-NNLVAEG 862 (1878)
T ss_dssp -----------------S--CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSC------SH-HHHTHHH
T ss_pred -----------------C--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccc------cc-chhhHHH
Confidence 1 1357999999999987765432 1 2889999999887 3321 01 1111111
Q ss_pred hccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC-----CCcEEec--CCC--ccCHHHHHH
Q 017290 224 LTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF-----REPVNIG--SDE--MVSMNEMAE 279 (374)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~-----~~~~~i~--~~~--~~s~~e~~~ 279 (374)
+.. . + ......+|+|.+++.++.... +..+.+. ++. ...+.++..
T Consensus 863 ~~~-~-------p---lr~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~ 916 (1878)
T 2uv9_A 863 VEK-L-------G---VRTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMT 916 (1878)
T ss_dssp HHT-T-------T---CCCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHH
T ss_pred HHh-c-------C---CCCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHH
Confidence 111 0 1 124588999999998876532 5666652 442 234555543
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.31 E-value=3.4e-12 Score=98.25 Aligned_cols=94 Identities=22% Similarity=0.214 Sum_probs=77.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGG 103 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~ 103 (374)
++|+|+|+|+ |++|+.+++.|++.| ++|++++|++.+.......++.++.+|+.+.+.+.++++++|+|||+++..
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~-- 80 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFF-- 80 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGG--
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCch--
Confidence 4689999999 999999999999999 999999998765433334467888999999999999999999999999631
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEE
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i 138 (374)
....+++++.+.+++++.
T Consensus 81 -----------------~~~~~~~~~~~~g~~~~~ 98 (118)
T 3ic5_A 81 -----------------LTPIIAKAAKAAGAHYFD 98 (118)
T ss_dssp -----------------GHHHHHHHHHHTTCEEEC
T ss_pred -----------------hhHHHHHHHHHhCCCEEE
Confidence 136788899999985444
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1.6e-11 Score=131.32 Aligned_cols=208 Identities=13% Similarity=0.044 Sum_probs=140.6
Q ss_pred CCCCCeEEEEcCcch-hHHHHHHHHHhCCCEEEEEe-CCCCcccc----c------ccccceeEEecccchhhHhhhcc-
Q 017290 23 PSEKLRISVTGAGGF-IASHIARRLKSEGHYIIASD-WKKNEHMT----E------DMFCHEFHLVDLRVMDNCLKVTK- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~----~------~~~~i~~~~~dl~~~~~~~~~~~- 89 (374)
...++++|||||+|. ||.++++.|++.|++|++++ |+...... . ....+.++.+|++|.+.+..+++
T Consensus 672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~ 751 (1887)
T 2uv8_A 672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF 751 (1887)
T ss_dssp CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence 456789999999998 99999999999999999984 55432211 0 02246788999999888876652
Q ss_pred ------------CCCEEEEcccccCCc-cccc-----CCcceehhhhHHHHHHHHHHHHhCC------CCeEEEeecccc
Q 017290 90 ------------GVDHVFNLAADMGGM-GFIQ-----SNHSVIMYNNTMISFNMLEASRISG------VKRFFYASSACI 145 (374)
Q Consensus 90 ------------~~d~vi~~a~~~~~~-~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~~------~~~~i~~Ss~~v 145 (374)
++|++||+||..... ...+ ...+..+.+|+.++..++++++... ..+||++||...
T Consensus 752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag 831 (1887)
T 2uv8_A 752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG 831 (1887)
T ss_dssp HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTT
T ss_pred HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHh
Confidence 589999999975422 1222 2245678999999999998875332 138999999754
Q ss_pred cCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHH-HHHHHhhhC--CcEEEEeeCcccCCCCCCCCCCCcHHHHHHH
Q 017290 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL-CKHYTKDFG--IECRVGRFHNIYGPFGTWKGMEKAPAAFCRK 222 (374)
Q Consensus 146 y~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~-~~~~~~~~~--~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~ 222 (374)
+.. ....|+.+|...+.+ .+.++.+.+ +++..+.||.+.+..-.. ........
T Consensus 832 ~~g-------------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~--~~~~~~~~--- 887 (1887)
T 2uv8_A 832 TFG-------------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMS--ANNIIAEG--- 887 (1887)
T ss_dssp CSS-------------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-------CCTTHHH---
T ss_pred ccC-------------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccc--cchhHHHH---
Confidence 311 235799999999998 666665433 889999999998421100 00011111
Q ss_pred HhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC-----CCCcEEe
Q 017290 223 ALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-----FREPVNI 266 (374)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~-----~~~~~~i 266 (374)
.. .. + ..+...+|+|.+++.++... .+..+.+
T Consensus 888 -~~-~~-------p---lr~~sPEEVA~avlfLaSd~~as~iTGq~I~V 924 (1887)
T 2uv8_A 888 -IE-KM-------G---VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMA 924 (1887)
T ss_dssp -HH-TT-------S---CCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEE
T ss_pred -HH-hc-------C---CCCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence 11 00 0 13458999999999988765 2566665
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=2.9e-11 Score=111.13 Aligned_cols=168 Identities=12% Similarity=-0.049 Sum_probs=115.4
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHh-CCCEEEEEeCCCCccccc------------------ccccceeEEecccchhh
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKS-EGHYIIASDWKKNEHMTE------------------DMFCHEFHLVDLRVMDN 83 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~------------------~~~~i~~~~~dl~~~~~ 83 (374)
...+|++|||||++-||.++++.|++ .|++|++++|+....... ....+..+.+|+++.+.
T Consensus 44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~ 123 (405)
T 3zu3_A 44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEI 123 (405)
T ss_dssp TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence 35679999999999999999999999 999999998876542210 11235678899999887
Q ss_pred Hhhhcc-------CCCEEEEcccccC------------C-cc------------------------cccCCcceehhhhH
Q 017290 84 CLKVTK-------GVDHVFNLAADMG------------G-MG------------------------FIQSNHSVIMYNNT 119 (374)
Q Consensus 84 ~~~~~~-------~~d~vi~~a~~~~------------~-~~------------------------~~~~~~~~~~~~n~ 119 (374)
+.++++ ++|++||+||... . .. ....+.+..+++|.
T Consensus 124 v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~ 203 (405)
T 3zu3_A 124 KQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMG 203 (405)
T ss_dssp HHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhc
Confidence 776653 6899999998631 0 00 11112233455565
Q ss_pred HHHH-HHHHHHHhCCC----CeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---h-
Q 017290 120 MISF-NMLEASRISGV----KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---F- 190 (374)
Q Consensus 120 ~~~~-~ll~a~~~~~~----~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~- 190 (374)
.+.. .++.++..... -++|++||....-.. +......|+.+|...+.+.+.++.+ .
T Consensus 204 ~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~---------------p~~~~~aY~AaKaal~~ltrsLA~Ela~~~ 268 (405)
T 3zu3_A 204 GEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITH---------------DIYWNGSIGAAKKDLDQKVLAIRESLAAHG 268 (405)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGT---------------TTTTTSHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred hhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcC---------------CCccchHHHHHHHHHHHHHHHHHHHhCccc
Confidence 5554 45555433221 279999996542110 1112368999999999999988765 4
Q ss_pred CCcEEEEeeCcccCC
Q 017290 191 GIECRVGRFHNIYGP 205 (374)
Q Consensus 191 ~~~~~ilR~~~v~g~ 205 (374)
|+++.++.|+.+--+
T Consensus 269 GIRVNaVaPG~i~T~ 283 (405)
T 3zu3_A 269 GGDARVSVLKAVVSQ 283 (405)
T ss_dssp SCEEEEEECCCCCCH
T ss_pred CeEEEEEEeCCCcCc
Confidence 789999999988654
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.27 E-value=5.5e-12 Score=130.75 Aligned_cols=209 Identities=12% Similarity=0.045 Sum_probs=136.6
Q ss_pred CCCCCCeEEEEcCcch-hHHHHHHHHHhCCCEEEEE-eCCCCccccc----------ccccceeEEecccchhhHhhhcc
Q 017290 22 WPSEKLRISVTGAGGF-IASHIARRLKSEGHYIIAS-DWKKNEHMTE----------DMFCHEFHLVDLRVMDNCLKVTK 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~-iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~----------~~~~i~~~~~dl~~~~~~~~~~~ 89 (374)
+...++++|||||+|. ||.++++.|++.|++|+++ .|+....... ....+.++.+|+++.+.+..+++
T Consensus 472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe 551 (1688)
T 2pff_A 472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE 551 (1688)
T ss_dssp CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence 3456788999999998 9999999999999999998 4554332111 01246788999999988877652
Q ss_pred -------------CCCEEEEcccccCCc-cccc-----CCcceehhhhHHHHHHHHHHHHhC------CCCeEEEeeccc
Q 017290 90 -------------GVDHVFNLAADMGGM-GFIQ-----SNHSVIMYNNTMISFNMLEASRIS------GVKRFFYASSAC 144 (374)
Q Consensus 90 -------------~~d~vi~~a~~~~~~-~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~------~~~~~i~~Ss~~ 144 (374)
++|++||+||..... ...+ .+....+++|+.++..++++++.. +..+||++||..
T Consensus 552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiA 631 (1688)
T 2pff_A 552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH 631 (1688)
T ss_dssp HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCT
T ss_pred HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChH
Confidence 489999999975322 1222 234567889999999998887321 113899999965
Q ss_pred ccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHH-HHHHHhhhC--CcEEEEeeCcccCCCCCCCCCCCcHHHHHH
Q 017290 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL-CKHYTKDFG--IECRVGRFHNIYGPFGTWKGMEKAPAAFCR 221 (374)
Q Consensus 145 vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~-~~~~~~~~~--~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~ 221 (374)
.+. + ....|+.+|...+.+ .+.++++.+ +++..+.||.+.+..-. .. .....
T Consensus 632 G~~-----------------G--g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~----~~--~e~~~ 686 (1688)
T 2pff_A 632 GTF-----------------G--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLM----SA--NNIIA 686 (1688)
T ss_dssp TTS-----------------S--CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSS----CT--TTTCS
T ss_pred hcc-----------------C--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCccc----CC--chHHH
Confidence 421 1 235799999999998 444444333 77778888888742110 00 00000
Q ss_pred HHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC-----CCCcEEe
Q 017290 222 KALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-----FREPVNI 266 (374)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~-----~~~~~~i 266 (374)
... .. ........+|+|.+++.++... .+..+.+
T Consensus 687 ~~l----------~~-iplR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~V 725 (1688)
T 2pff_A 687 EGI----------EK-MGVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMA 725 (1688)
T ss_dssp TTT----------SS-SSCCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCC
T ss_pred HHH----------Hh-CCCCCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence 000 00 0112447789999999988765 2555554
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.25 E-value=3.6e-11 Score=121.97 Aligned_cols=162 Identities=15% Similarity=0.075 Sum_probs=122.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHH-hCCC-EEEEEeCCCCccccc---------ccccceeEEecccchhhHhhhcc---
Q 017290 24 SEKLRISVTGAGGFIASHIARRLK-SEGH-YIIASDWKKNEHMTE---------DMFCHEFHLVDLRVMDNCLKVTK--- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~-~~g~-~V~~~~r~~~~~~~~---------~~~~i~~~~~dl~~~~~~~~~~~--- 89 (374)
...+.+|||||+|-||+++++.|. ++|. +|++++|+....... ....+.++.+|++|.+.+..+++
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~ 607 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP 607 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 356899999999999999999999 7898 589999984322111 12246789999999998888775
Q ss_pred ---CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 90 ---GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 90 ---~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
.+|+|||+|+......+.+ .+.+..+++|+.++.++.+++. ... +||++||...+-.
T Consensus 608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~-~~l-~iV~~SS~ag~~g--------------- 670 (795)
T 3slk_A 608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID-PDV-ALVLFSSVSGVLG--------------- 670 (795)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC-TTS-EEEEEEETHHHHT---------------
T ss_pred HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh-hCC-EEEEEccHHhcCC---------------
Confidence 4799999999764322222 3345578899999999999873 234 8999999765321
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCC
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~ 205 (374)
......|+.+|...+.+.+.+.. .|++++.+-||.+-..
T Consensus 671 --~~g~~~YaAaka~~~alA~~~~~-~Gi~v~sI~pG~v~t~ 709 (795)
T 3slk_A 671 --SGGQGNYAAANSFLDALAQQRQS-RGLPTRSLAWGPWAEH 709 (795)
T ss_dssp --CSSCHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCCSCC
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHH-cCCeEEEEECCeECcc
Confidence 12346899999988888777655 5999999999988754
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=99.21 E-value=9.1e-12 Score=113.61 Aligned_cols=171 Identities=12% Similarity=0.090 Sum_probs=116.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-------EEEEEeCC----CCccc----ccccccceeEEecccchhhHhhhcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-------YIIASDWK----KNEHM----TEDMFCHEFHLVDLRVMDNCLKVTK 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~----~~~~~~i~~~~~dl~~~~~~~~~~~ 89 (374)
++|||+||||+|++|++++..|+..|+ +|+++++. ..+.. +.......+ ..++....++.++++
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~ 82 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFK 82 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHhC
Confidence 458999999999999999999998885 89999887 22111 011100112 356666667788899
Q ss_pred CCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CC-eEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VK-RFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~-~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
++|+|||+|+.... ...+..+.+..|+..++.+++++.+.+ .+ ++|++|...-. ... ...+..+ ...
T Consensus 83 ~aD~Vi~~ag~~~~---~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~-~t~------~~~~~~~-~~p 151 (329)
T 1b8p_A 83 DADVALLVGARPRG---PGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANT-NAY------IAMKSAP-SLP 151 (329)
T ss_dssp TCSEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH-HHH------HHHHTCT-TSC
T ss_pred CCCEEEEeCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHH-HHH------HHHHHcC-CCC
Confidence 99999999996432 222345677889999999999999984 66 89988872200 000 0011110 112
Q ss_pred CCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCC
Q 017290 168 PQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFG 207 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~ 207 (374)
+...++.+++...++...+++..+++...++...|+|.+.
T Consensus 152 ~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg 191 (329)
T 1b8p_A 152 AKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHS 191 (329)
T ss_dssp GGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSS
T ss_pred HHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEeccC
Confidence 3346888888888888888888888877777777888653
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=2e-10 Score=107.23 Aligned_cols=167 Identities=11% Similarity=-0.011 Sum_probs=111.8
Q ss_pred CCCCeEEEEcCcchhHHH--HHHHHHhCCCEEEEEeCCCCcccc------------------cccccceeEEecccchhh
Q 017290 24 SEKLRISVTGAGGFIASH--IARRLKSEGHYIIASDWKKNEHMT------------------EDMFCHEFHLVDLRVMDN 83 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~------------------~~~~~i~~~~~dl~~~~~ 83 (374)
..+|++|||||++-||.+ +++.|.+.|++|++++|+...... .....+..+.+|+++.+.
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~ 137 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET 137 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence 467899999999999999 999999999999999987543211 011235678899999887
Q ss_pred Hhhhcc-------CCCEEEEcccccC------------Cc-cc------------------------ccCCcceehhhhH
Q 017290 84 CLKVTK-------GVDHVFNLAADMG------------GM-GF------------------------IQSNHSVIMYNNT 119 (374)
Q Consensus 84 ~~~~~~-------~~d~vi~~a~~~~------------~~-~~------------------------~~~~~~~~~~~n~ 119 (374)
+.++++ ++|++||+|+... .. .. ...+.+..+++|.
T Consensus 138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~ 217 (418)
T 4eue_A 138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG 217 (418)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence 776653 6899999998630 00 00 0111112233333
Q ss_pred HHHH-HHHHHHHhCCC----CeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh----h
Q 017290 120 MISF-NMLEASRISGV----KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD----F 190 (374)
Q Consensus 120 ~~~~-~ll~a~~~~~~----~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~----~ 190 (374)
.+.. .++.++..... .++|++||....-. ++......|+.+|...+.+.+.++.+ .
T Consensus 218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~---------------~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~ 282 (418)
T 4eue_A 218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRT---------------YKIYREGTIGIAKKDLEDKAKLINEKLNRVI 282 (418)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG---------------TTTTTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC---------------CCccccHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 3333 44555443332 27999998643210 02222378999999999998888754 5
Q ss_pred CCcEEEEeeCcccCC
Q 017290 191 GIECRVGRFHNIYGP 205 (374)
Q Consensus 191 ~~~~~ilR~~~v~g~ 205 (374)
|+++.++.||.+--+
T Consensus 283 GIrVN~V~PG~v~T~ 297 (418)
T 4eue_A 283 GGRAFVSVNKALVTK 297 (418)
T ss_dssp SCEEEEEECCCCCCH
T ss_pred CeEEEEEECCcCcCh
Confidence 799999999988754
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.19 E-value=7.8e-11 Score=116.00 Aligned_cols=221 Identities=13% Similarity=0.055 Sum_probs=141.3
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC---------cccc----cccccceeEEecccchhhHhhh--
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN---------EHMT----EDMFCHEFHLVDLRVMDNCLKV-- 87 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~~----~~~~~i~~~~~dl~~~~~~~~~-- 87 (374)
...++.++||||++-||+++++.|+++|++|++.+|+.. .... ....+.. ...|+.|.+++..+
T Consensus 5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~~v~ 83 (604)
T 2et6_A 5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDKIVE 83 (604)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHHHHH
Confidence 346689999999999999999999999999999987641 1100 0001112 23566665433333
Q ss_pred -----ccCCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccc
Q 017290 88 -----TKGVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETN 155 (374)
Q Consensus 88 -----~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~ 155 (374)
+.++|++||+||...... ....+.+..+++|+.++..+.+++. +.+-.++|++||...+-
T Consensus 84 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~-------- 155 (604)
T 2et6_A 84 TAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY-------- 155 (604)
T ss_dssp HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH--------
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC--------
Confidence 237999999999753222 2233455678899999888877653 33334899999965431
Q ss_pred cCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEe
Q 017290 156 VSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEM 232 (374)
Q Consensus 156 ~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (374)
+......|+.+|.....+.+.++.+ .|+++..+.|+ +. + .+.....
T Consensus 156 ---------~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~----T---------~m~~~~~-------- 204 (604)
T 2et6_A 156 ---------GNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-AR----S---------RMTESIM-------- 204 (604)
T ss_dssp ---------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CC----C---------HHHHTTS--------
T ss_pred ---------CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-Cc----C---------ccccccC--------
Confidence 1112357999999999999988765 47999999996 21 1 1111000
Q ss_pred eCCCcccccceeHHHHHHHHHhhhccC---CCCcEEecCC------------------CccCHHHHHHHHHHhcC
Q 017290 233 WGDGLQTRSFTFIDECVEGVLRLTKSD---FREPVNIGSD------------------EMVSMNEMAEIVLSFED 286 (374)
Q Consensus 233 ~~~~~~~~~~i~~~Dva~~i~~~~~~~---~~~~~~i~~~------------------~~~s~~e~~~~i~~~~g 286 (374)
..........+|+|.+++.++... .+.++.+.++ ...+..++.+.+.++..
T Consensus 205 ---~~~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 276 (604)
T 2et6_A 205 ---PPPMLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILD 276 (604)
T ss_dssp ---CHHHHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTC
T ss_pred ---ChhhhccCCHHHHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhc
Confidence 001122357899999998888653 2445554432 34677888877766543
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.9e-10 Score=106.67 Aligned_cols=168 Identities=13% Similarity=0.002 Sum_probs=113.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHh-CCCEEEEEeCCCCccccc----------------c--cccceeEEecccchhhH
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKS-EGHYIIASDWKKNEHMTE----------------D--MFCHEFHLVDLRVMDNC 84 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~----------------~--~~~i~~~~~dl~~~~~~ 84 (374)
..+|++|||||++-||+++++.|++ .|++|++++|+....... . ...+..+.+|+++.+.+
T Consensus 59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v 138 (422)
T 3s8m_A 59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR 138 (422)
T ss_dssp SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence 3578999999999999999999999 999999999876543210 1 11356788999998876
Q ss_pred hhhc--------cCCCEEEEccccc------------CCc-cc------------------------ccCCcceehhhhH
Q 017290 85 LKVT--------KGVDHVFNLAADM------------GGM-GF------------------------IQSNHSVIMYNNT 119 (374)
Q Consensus 85 ~~~~--------~~~d~vi~~a~~~------------~~~-~~------------------------~~~~~~~~~~~n~ 119 (374)
.+++ .++|++||+||.. +.. .. ...+.+..+++|.
T Consensus 139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~ 218 (422)
T 3s8m_A 139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG 218 (422)
T ss_dssp HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence 6554 4689999999862 000 00 1111122343444
Q ss_pred HHHH-HHHHHHHhCCC----CeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hC
Q 017290 120 MISF-NMLEASRISGV----KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FG 191 (374)
Q Consensus 120 ~~~~-~ll~a~~~~~~----~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~ 191 (374)
.+.. .++.++..... .++|++||....-.. +......|+.+|...+.+.+.++.+ .|
T Consensus 219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~---------------p~~~~~aY~ASKaAl~~lTrsLA~Ela~~G 283 (422)
T 3s8m_A 219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEITW---------------PIYWHGALGKAKVDLDRTAQRLNARLAKHG 283 (422)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGH---------------HHHTSHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccC---------------CCccchHHHHHHHHHHHHHHHHHHHhCccC
Confidence 4443 45555543321 279999997543110 1112257999999999999988765 47
Q ss_pred CcEEEEeeCcccCCC
Q 017290 192 IECRVGRFHNIYGPF 206 (374)
Q Consensus 192 ~~~~ilR~~~v~g~~ 206 (374)
+++.++.||.+--+.
T Consensus 284 IRVNaVaPG~i~T~~ 298 (422)
T 3s8m_A 284 GGANVAVLKSVVTQA 298 (422)
T ss_dssp CEEEEEEECCCCCTT
T ss_pred EEEEEEEcCCCcChh
Confidence 999999999987654
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=99.01 E-value=7.7e-10 Score=100.61 Aligned_cols=114 Identities=12% Similarity=0.009 Sum_probs=81.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCccc--ccccccce-eEEecccchhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHM--TEDMFCHE-FHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~~i~-~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
++|||+|+||+|++|..++..|+..| ++|+++++++.... +....... .+.+ +.+.+++.++++++|+|||+++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~-~~~t~d~~~al~gaDvVi~~ag 85 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRG-FLGQQQLEAALTGMDLIIVPAG 85 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEE-EESHHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEE-EeCCCCHHHHcCCCCEEEEcCC
Confidence 35799999999999999999999988 89999997764110 00100001 1111 2234567788999999999999
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
..... ..........|+.+++.+++++.+.+.+.+|+++|
T Consensus 86 ~~~~~---g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S 125 (326)
T 1smk_A 86 VPRKP---GMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS 125 (326)
T ss_dssp CCCCS---SCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred cCCCC---CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 64321 22345568899999999999999998877777777
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=5.2e-09 Score=117.50 Aligned_cols=163 Identities=16% Similarity=0.108 Sum_probs=116.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCE-EEEEeCCCCcccc-------c--ccccceeEEecccchhhHhhhcc-----
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHMT-------E--DMFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~-------~--~~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
.++.++||||+|-||+++++.|+++|++ |++++|+..+... . ....+.++.+|++|.+.+..+++
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence 5688999999999999999999999986 7778887654210 0 11246678899999988877664
Q ss_pred -CCCEEEEcccccCCc---ccccCCcceehhhhHHHHHHHHHHHHhC--CCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 90 -GVDHVFNLAADMGGM---GFIQSNHSVIMYNNTMISFNMLEASRIS--GVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
.+|+|||+|+..... .....+....+++|+.++.++.+++... ...+||++||....-.
T Consensus 1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g--------------- 2027 (2512)
T 2vz8_A 1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRG--------------- 2027 (2512)
T ss_dssp SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTT---------------
T ss_pred CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCC---------------
Confidence 689999999975321 2334456778999999999998877653 2359999999655321
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCC
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~ 205 (374)
......|+.+|...+.+++.... .|++...+-++.+-+.
T Consensus 2028 --~~g~~~Y~aaKaal~~l~~~rr~-~Gl~~~a~~~g~~~~~ 2066 (2512)
T 2vz8_A 2028 --NAGQANYGFANSAMERICEKRRH-DGLPGLAVQWGAIGDV 2066 (2512)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHH-TTSCCCEEEECCBCTT
T ss_pred --CCCcHHHHHHHHHHHHHHHHHHH-CCCcEEEEEccCcCCc
Confidence 12346899999999999886655 4899998888776443
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=3.4e-09 Score=84.20 Aligned_cols=101 Identities=12% Similarity=0.148 Sum_probs=74.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhh-ccCCCEEEEcccccCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAADMGG 103 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~~~~~ 103 (374)
++++|+|+|+ |.+|+.+++.|.+.|++|+++++++.........+..++.+|..+.+.+.++ ++++|+||++++..
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~-- 81 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN-- 81 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC--
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc--
Confidence 4578999997 9999999999999999999999976543333333456778899888877776 67899999998731
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecc
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~ 143 (374)
......+...+++.+++++|..++.
T Consensus 82 ---------------~~~~~~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 82 ---------------IQASTLTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp ---------------HHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred ---------------hHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 1112346677788887777766654
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.86 E-value=8.6e-09 Score=81.80 Aligned_cols=74 Identities=16% Similarity=0.136 Sum_probs=61.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhh-ccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~ 99 (374)
+|++|+|+|+ |.+|+++++.|.+.|++|+++++++.........++.++.+|.++.+.+.++ ++++|+||.+.+
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 4578999996 9999999999999999999999987654433344678899999999888776 468999998876
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.83 E-value=1.5e-08 Score=80.05 Aligned_cols=97 Identities=14% Similarity=0.131 Sum_probs=70.2
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc-ccceeEEecccchhhHhhh-ccCCCEEEEcccccCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM-FCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAADMGG 103 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~~~~~ 103 (374)
.|+|+|+|+ |++|+.+++.|.+.|++|+++++++........ .++.++.+|..+.+.+.+. ++++|+||++.+..
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~-- 80 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE-- 80 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH--
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc--
Confidence 478999986 999999999999999999999997654322221 2556778898887777654 67899999997521
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEee
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~S 141 (374)
..| ..+.+.++..+.+++|..+
T Consensus 81 ------------~~~----~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 81 ------------EVN----LMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp ------------HHH----HHHHHHHHHTTCCCEEEEC
T ss_pred ------------hHH----HHHHHHHHHcCCCEEEEEe
Confidence 112 2455677777776777543
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=3.3e-09 Score=95.98 Aligned_cols=166 Identities=16% Similarity=0.075 Sum_probs=105.5
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeC--CCCcccc----ccccccee--EEecccch-hhHhhhccCCCEEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH--YIIASDW--KKNEHMT----EDMFCHEF--HLVDLRVM-DNCLKVTKGVDHVF 95 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~----~~~~~i~~--~~~dl~~~-~~~~~~~~~~d~vi 95 (374)
|||+||||+|++|++++..|+..++ ++..+++ +..+... ... ...+ ...++.+. +.+.++++++|+||
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~-~~~~~~~~~~i~~~~d~l~~al~gaD~Vi 79 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYD-ALAGTRSDANIYVESDENLRIIDESDVVI 79 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHH-HHTTSCCCCEEEEEETTCGGGGTTCSEEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHH-hHHhcCCCeEEEeCCcchHHHhCCCCEEE
Confidence 6899999999999999999998875 6788887 3221100 000 0000 11233322 23667889999999
Q ss_pred EcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHH-
Q 017290 96 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGL- 174 (374)
Q Consensus 96 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~- 174 (374)
|+|+..... .......+..|+.+++.+++++++.+ +.+|+++|--+..... .+.... ...+...+|.
T Consensus 80 ~~Ag~~~~~---g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv~~~t~------~~~k~~--~~p~~rviG~g 147 (313)
T 1hye_A 80 ITSGVPRKE---GMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPVDVMTY------KALVDS--KFERNQVFGLG 147 (313)
T ss_dssp ECCSCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSHHHHHH------HHHHHH--CCCTTSEEECT
T ss_pred ECCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcHHHHHH------HHHHhh--CcChhcEEEeC
Confidence 999964321 22345568899999999999999998 8778777732211000 000111 2345567777
Q ss_pred hHHHHHHHHHHHHhhhCCcEEEEeeCcccCCC
Q 017290 175 EKLASEELCKHYTKDFGIECRVGRFHNIYGPF 206 (374)
Q Consensus 175 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~ 206 (374)
+.+...++...+++..+++...++. .++|.+
T Consensus 148 t~LD~~r~~~~la~~lgv~~~~v~~-~v~G~H 178 (313)
T 1hye_A 148 THLDSLRFKVAIAKFFGVHIDEVRT-RIIGEH 178 (313)
T ss_dssp THHHHHHHHHHHHHHHTCCGGGEEC-CEEECS
T ss_pred ccHHHHHHHHHHHHHhCcCHHHeEE-EEeecc
Confidence 7776777777777777776555554 566654
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.79 E-value=5.2e-09 Score=94.16 Aligned_cols=159 Identities=15% Similarity=0.124 Sum_probs=97.7
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeC--CCCcccccccccceeEEecccch-----------hhHhhhccCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH--YIIASDW--KKNEHMTEDMFCHEFHLVDLRVM-----------DNCLKVTKGV 91 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~i~~~~~dl~~~-----------~~~~~~~~~~ 91 (374)
|||+|+||+|++|++++..|+..++ ++..+++ .+.+... ...|+.+. +. .++++++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~--------~~~dl~~~~~~~~~~~v~~~~-~~a~~~a 71 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVG--------QAADTNHGIAYDSNTRVRQGG-YEDTAGS 71 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHH--------HHHHHHHHHTTTCCCEEEECC-GGGGTTC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHH--------HHHHHHHHHhhCCCcEEEeCC-HHHhCCC
Confidence 6899999999999999999998875 6888887 3321100 01222221 11 4568899
Q ss_pred CEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCc
Q 017290 92 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA 171 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~ 171 (374)
|+|||+|+..... .......+..|+..++.+++++++.+.+.+|+++|--+--... -+.... ...+...
T Consensus 72 DvVi~~ag~~~~~---g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv~~~~~------~~~~~~--~~p~~rv 140 (303)
T 1o6z_A 72 DVVVITAGIPRQP---GQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNR------HLYEAG--DRSREQV 140 (303)
T ss_dssp SEEEECCCCCCCT---TCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHHH------HHHHHS--SSCGGGE
T ss_pred CEEEEcCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHH------HHHHHc--CCCHHHe
Confidence 9999999964321 2233456789999999999999999988778777631100000 000111 1223344
Q ss_pred hHH-hHHHHHHHHHHHHhhhCCcEEEEeeCcccCCC
Q 017290 172 YGL-EKLASEELCKHYTKDFGIECRVGRFHNIYGPF 206 (374)
Q Consensus 172 y~~-sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~ 206 (374)
.|. +-+..-++....++..+++..-++ ..++|.+
T Consensus 141 iG~gt~Ld~~r~~~~la~~l~v~~~~v~-~~v~G~H 175 (303)
T 1o6z_A 141 IGFGGRLDSARFRYVLSEEFDAPVQNVE-GTILGEH 175 (303)
T ss_dssp EECCHHHHHHHHHHHHHHHHTCCGGGEE-CCEEECS
T ss_pred eecccchhHHHHHHHHHHHhCcCHHHeE-EEEEeCC
Confidence 555 444444444455555666555555 6777864
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=1.5e-07 Score=75.79 Aligned_cols=99 Identities=19% Similarity=0.198 Sum_probs=73.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-cccceeEEecccchhhHhhh-ccCCCEEEEcccccC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAADMG 102 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~~~~ 102 (374)
..++|+|+|+ |.+|+.+++.|.+.|++|++++|++....... ..+..++.+|..+.+.+.++ ++++|+||.+.+.
T Consensus 18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~-- 94 (155)
T 2g1u_A 18 KSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTND-- 94 (155)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSC--
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCC--
Confidence 4588999995 99999999999999999999999876654443 34567778888887777665 6789999999862
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHh-CCCCeEEEeec
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRI-SGVKRFFYASS 142 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~-~~~~~~i~~Ss 142 (374)
-.....+++.++. .+..++|...+
T Consensus 95 ----------------~~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 95 ----------------DSTNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp ----------------HHHHHHHHHHHHHTSCCSEEEEECS
T ss_pred ----------------cHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 1112345566666 56556665544
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.67 E-value=4.5e-08 Score=90.57 Aligned_cols=102 Identities=20% Similarity=0.177 Sum_probs=74.5
Q ss_pred ccCCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEE
Q 017290 17 EREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 17 ~~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
.....|..+.|||+|.|| |++|+.+++.|. +.++|++.+++..+.... ...+..+..|+.|.+.+.++++++|+||+
T Consensus 7 ~~~~~~~g~~mkilvlGa-G~vG~~~~~~L~-~~~~v~~~~~~~~~~~~~-~~~~~~~~~d~~d~~~l~~~~~~~DvVi~ 83 (365)
T 3abi_A 7 HHHHHIEGRHMKVLILGA-GNIGRAIAWDLK-DEFDVYIGDVNNENLEKV-KEFATPLKVDASNFDKLVEVMKEFELVIG 83 (365)
T ss_dssp ---------CCEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCHHHHHHH-TTTSEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred cccccccCCccEEEEECC-CHHHHHHHHHHh-cCCCeEEEEcCHHHHHHH-hccCCcEEEecCCHHHHHHHHhCCCEEEE
Confidence 344556677899999998 999999999885 468999999876543222 22456778899999999999999999999
Q ss_pred cccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEee
Q 017290 97 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141 (374)
Q Consensus 97 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~S 141 (374)
++++.. ...++++|.+.|+ ++|=+|
T Consensus 84 ~~p~~~-------------------~~~v~~~~~~~g~-~yvD~s 108 (365)
T 3abi_A 84 ALPGFL-------------------GFKSIKAAIKSKV-DMVDVS 108 (365)
T ss_dssp CCCGGG-------------------HHHHHHHHHHHTC-EEEECC
T ss_pred ecCCcc-------------------cchHHHHHHhcCc-ceEeee
Confidence 997421 2468899999997 787654
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=3.3e-08 Score=88.37 Aligned_cols=78 Identities=17% Similarity=0.145 Sum_probs=64.0
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-----cccceeEEecccchhhHhhhccCCCEEEEc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-----MFCHEFHLVDLRVMDNCLKVTKGVDHVFNL 97 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~ 97 (374)
...+++++||||+|.+|+++++.|++.|++|++++|+..+..... ..++.++.+|+++.+.+.++++++|+|||+
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~ 195 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA 195 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEEC
Confidence 346689999999999999999999999999999999854322111 024567889999999999999999999999
Q ss_pred ccc
Q 017290 98 AAD 100 (374)
Q Consensus 98 a~~ 100 (374)
++.
T Consensus 196 ag~ 198 (287)
T 1lu9_A 196 GAI 198 (287)
T ss_dssp CCT
T ss_pred CCc
Confidence 974
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=4.1e-07 Score=102.59 Aligned_cols=223 Identities=15% Similarity=0.047 Sum_probs=137.3
Q ss_pred CCCCeEEEEcCcch-hHHHHHHHHHhCCCEEEEEeCCCCc-----cccc------ccccceeEEecccchhhHhhhc---
Q 017290 24 SEKLRISVTGAGGF-IASHIARRLKSEGHYIIASDWKKNE-----HMTE------DMFCHEFHLVDLRVMDNCLKVT--- 88 (374)
Q Consensus 24 ~~~~~ilItGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~------~~~~i~~~~~dl~~~~~~~~~~--- 88 (374)
..+|++|||||++- ||.++++.|++.|.+|++++|+... .... ....+..+.+|+++.+++..++
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 46799999999998 9999999999999999999998654 1111 1123567889999988877653
Q ss_pred --------cCCCEEEEcccc----cCCc----ccccCCccee----hhhhHHHHHHHHHHHHh----CCCC---eEEEee
Q 017290 89 --------KGVDHVFNLAAD----MGGM----GFIQSNHSVI----MYNNTMISFNMLEASRI----SGVK---RFFYAS 141 (374)
Q Consensus 89 --------~~~d~vi~~a~~----~~~~----~~~~~~~~~~----~~~n~~~~~~ll~a~~~----~~~~---~~i~~S 141 (374)
.++|++||+||. .... .....+.+.. +++|+.++..++.++.. .+.. .+|..+
T Consensus 2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D 2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence 258999999996 1110 0111222223 66778777777665543 3321 222222
Q ss_pred cccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh--h--CCcEEEEeeCcccCCCCCCCCCCCcHH
Q 017290 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD--F--GIECRVGRFHNIYGPFGTWKGMEKAPA 217 (374)
Q Consensus 142 s~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~--~--~~~~~ilR~~~v~g~~~~~~~~~~~~~ 217 (374)
|. ..+ .......|+.+|...+.+.+.++.+ . ++.+..+.||.+-+..-.. ......
T Consensus 2294 ss-~~g-----------------~~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~--~~~~~~ 2353 (3089)
T 3zen_D 2294 SP-NRG-----------------MFGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMG--QNDAIV 2353 (3089)
T ss_dssp CS-STT-----------------SCSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTT--TTTTTH
T ss_pred Cc-ccc-----------------cCCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccc--cchhHH
Confidence 21 111 0112347999999999999999887 3 3777788888886432110 000111
Q ss_pred HHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC-----CCcE--EecCCC---ccCHHHHHHHH
Q 017290 218 AFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF-----REPV--NIGSDE---MVSMNEMAEIV 281 (374)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~-----~~~~--~i~~~~---~~s~~e~~~~i 281 (374)
..... . + ......+|+|.+++.++.... +... +++++- ...+.+++..+
T Consensus 2354 ----~~~~~-----~-~-----~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~ 2412 (3089)
T 3zen_D 2354 ----SAVEE-----A-G-----VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKA 2412 (3089)
T ss_dssp ----HHHGG-----G-S-----CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHH
T ss_pred ----HHHHh-----c-C-----CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHH
Confidence 11110 0 0 122378999999999886532 2333 344543 36788887765
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.61 E-value=1.7e-07 Score=75.29 Aligned_cols=74 Identities=12% Similarity=0.017 Sum_probs=59.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc----ccccccccceeEEecccchhhHhhh-ccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE----HMTEDMFCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~ 99 (374)
..++|+|+|+ |.+|+.+++.|.+.|++|+++++++.. .......++.++.+|.++.+.+.++ ++++|+||.+.+
T Consensus 2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence 4578999995 999999999999999999999997421 1111123578999999999988876 789999999876
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.58 E-value=6.2e-08 Score=90.79 Aligned_cols=94 Identities=15% Similarity=0.188 Sum_probs=72.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCC---CEEEEEeCCCCccccccc-------ccceeEEecccchhhHhhhccC--CCE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEG---HYIIASDWKKNEHMTEDM-------FCHEFHLVDLRVMDNCLKVTKG--VDH 93 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~-------~~i~~~~~dl~~~~~~~~~~~~--~d~ 93 (374)
|++|+|+|| |++|+.+++.|++.| .+|++.+|+..+...... ..+..+.+|+++.+++.+++++ +|+
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 579999998 999999999999988 389999998754322111 1367889999999999999986 999
Q ss_pred EEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEe
Q 017290 94 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYA 140 (374)
Q Consensus 94 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~ 140 (374)
|||++++.. ...++++|.+.++ +++-+
T Consensus 80 Vin~ag~~~-------------------~~~v~~a~l~~g~-~vvD~ 106 (405)
T 4ina_A 80 VLNIALPYQ-------------------DLTIMEACLRTGV-PYLDT 106 (405)
T ss_dssp EEECSCGGG-------------------HHHHHHHHHHHTC-CEEES
T ss_pred EEECCCccc-------------------ChHHHHHHHHhCC-CEEEe
Confidence 999997421 1467888988887 45533
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.49 E-value=3.6e-07 Score=75.74 Aligned_cols=75 Identities=13% Similarity=0.096 Sum_probs=62.2
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCCCCcccccccccceeEEecccchhhHhhh--ccCCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSE-GHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV--TKGVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~--~~~~d~vi~~a~ 99 (374)
...++|+|+| .|.+|+.+++.|.+. |++|+++++++.........++.++.+|.++.+.+.++ ++++|+||.+.+
T Consensus 37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 3467899998 699999999999999 99999999987654433344677888999988888877 789999998875
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=3.4e-07 Score=82.58 Aligned_cols=110 Identities=15% Similarity=0.083 Sum_probs=77.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCccc--ccccccceeEEecccc---hhhHhhhccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHM--TEDMFCHEFHLVDLRV---MDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~~i~~~~~dl~~---~~~~~~~~~~~d~vi~~a~ 99 (374)
|||.|+||+|++|..++..|+..| ++|.++++++.... .... .. ...++.. .+++.++++++|+||++++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~-~~--~~~~l~~~~~t~d~~~a~~~aDvVvi~ag 77 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSH-IE--TRATVKGYLGPEQLPDCLKGCDVVVIPAG 77 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTT-SS--SSCEEEEEESGGGHHHHHTTCSEEEECCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhc-cC--cCceEEEecCCCCHHHHhCCCCEEEECCC
Confidence 689999999999999999999888 79999999862111 0000 00 0112222 2356778899999999998
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
..... .....+....|+...+.+++.+.+...+ ++|++|.
T Consensus 78 ~~~~~---g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN 118 (314)
T 1mld_A 78 VPRKP---GMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN 118 (314)
T ss_dssp CCCCT---TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred cCCCC---CCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 65422 2233456788999999999999887754 7777655
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.43 E-value=2.4e-07 Score=87.83 Aligned_cols=109 Identities=12% Similarity=0.057 Sum_probs=75.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc--ccceeEEecccchhhHhhhccCCCEEEEcccccC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM--FCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
.+++|+|+| +|++|+++++.|++.|++|++++|+..+...... .++..+.+|+.+.+.+.++++++|+|||+++...
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~ 80 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTF 80 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--C
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCcccc
Confidence 468999998 8999999999999999999999998654322211 1356778899998889888999999999998532
Q ss_pred CcccccC--Cc-ceehhh--hHHHHHHHHHHHHhCCC
Q 017290 103 GMGFIQS--NH-SVIMYN--NTMISFNMLEASRISGV 134 (374)
Q Consensus 103 ~~~~~~~--~~-~~~~~~--n~~~~~~ll~a~~~~~~ 134 (374)
....... .. ..++.. ....+..++++|++.|+
T Consensus 81 ~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv 117 (450)
T 1ff9_A 81 HATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGI 117 (450)
T ss_dssp HHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTC
T ss_pred chHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCC
Confidence 1000000 00 111111 12457888999999997
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=2e-07 Score=84.57 Aligned_cols=167 Identities=16% Similarity=0.125 Sum_probs=100.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC--E-----EEEEeCCCCc------ccccccccceeEEecccchhhHhhhccCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH--Y-----IIASDWKKNE------HMTEDMFCHEFHLVDLRVMDNCLKVTKGV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~~------~~~~~~~~i~~~~~dl~~~~~~~~~~~~~ 91 (374)
.++||+||||+|+||++++..|+..+. + ++++++++.. ..+.......+. .++...+...+.++++
T Consensus 2 ~~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~~~~~~~~da 80 (333)
T 5mdh_A 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATDKEEIAFKDL 80 (333)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEESCHHHHTTTC
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcCCcHHHhCCC
Confidence 357999999999999999999988764 4 8888886421 001110001111 2333334456678899
Q ss_pred CEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC--eEEEeeccc---ccCCCcccccccCCCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK--RFFYASSAC---IYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~--~~i~~Ss~~---vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
|+||++|+.... ...+..+.++.|+..++.+++++.+++.+ +++.+|... +|- ..+.. +.
T Consensus 81 DvVvitAg~prk---pG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd~~t~~----------~~~~~--~~ 145 (333)
T 5mdh_A 81 DVAILVGSMPRR---DGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLT----------ASKSA--PS 145 (333)
T ss_dssp SEEEECCSCCCC---TTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHH----------HHHTC--TT
T ss_pred CEEEEeCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchHHHHHH----------HHHHc--CC
Confidence 999999985432 23345677889999999999999998865 577776521 110 01111 11
Q ss_pred CCCCch-HHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCC
Q 017290 167 EPQDAY-GLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFG 207 (374)
Q Consensus 167 ~~~~~y-~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~ 207 (374)
.|.... +.+.+..-++-...++..+++...++-..|+|.++
T Consensus 146 ~p~~~ig~~t~LDs~R~~~~la~~l~v~~~~v~~~vV~GeHg 187 (333)
T 5mdh_A 146 IPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHS 187 (333)
T ss_dssp SCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred CCcCEEEEEEhHHHHHHHHHHHHHhCcCHHHeeecEEEEcCC
Confidence 122222 23444444444455555676666665444678764
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=4.2e-07 Score=80.15 Aligned_cols=78 Identities=14% Similarity=0.172 Sum_probs=47.0
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhC-CCEEE-EEeCCCCcccccc-cccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSE-GHYII-ASDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~-g~~V~-~~~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
.+++|||+|+|++|.+|+.+++.+++. +++|. +++++++...... ..-......++...+++.++++++|+||+++.
T Consensus 2 ~~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft~ 81 (273)
T 1dih_A 2 HDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTR 81 (273)
T ss_dssp CCCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSC
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcCC
Confidence 445689999999999999999998864 78887 4455543211000 00000001112122334455668999999986
Q ss_pred c
Q 017290 100 D 100 (374)
Q Consensus 100 ~ 100 (374)
+
T Consensus 82 p 82 (273)
T 1dih_A 82 P 82 (273)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.41 E-value=9.1e-07 Score=75.30 Aligned_cols=74 Identities=14% Similarity=0.083 Sum_probs=53.5
Q ss_pred CCCeEEEEcC----------------cchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhH----
Q 017290 25 EKLRISVTGA----------------GGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNC---- 84 (374)
Q Consensus 25 ~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~---- 84 (374)
.+|+|||||| +|.+|.+++++|+.+|++|+++.|+...... ...++.+ .++...+++
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~-~~~~~~~--~~v~s~~em~~~v 78 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE-PHPNLSI--REITNTKDLLIEM 78 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC-CCTTEEE--EECCSHHHHHHHH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-CCCCeEE--EEHhHHHHHHHHH
Confidence 4689999999 9999999999999999999999998643221 1123333 344444433
Q ss_pred hhhccCCCEEEEccccc
Q 017290 85 LKVTKGVDHVFNLAADM 101 (374)
Q Consensus 85 ~~~~~~~d~vi~~a~~~ 101 (374)
.+.+.++|++||+|+..
T Consensus 79 ~~~~~~~Dili~aAAvs 95 (232)
T 2gk4_A 79 QERVQDYQVLIHSMAVS 95 (232)
T ss_dssp HHHGGGCSEEEECSBCC
T ss_pred HHhcCCCCEEEEcCccc
Confidence 33445899999999964
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.40 E-value=8e-07 Score=75.91 Aligned_cols=72 Identities=13% Similarity=0.011 Sum_probs=60.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-cccceeEEecccchhhHhhh-ccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~ 99 (374)
|+|+|+|+ |.+|+++++.|.+.|++|+++++++....... ..++.++.+|.++.+.+.++ ++++|+||-+.+
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 68999995 99999999999999999999999876543322 23578899999999988876 679999998765
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.34 E-value=6.5e-07 Score=85.07 Aligned_cols=111 Identities=11% Similarity=0.031 Sum_probs=73.8
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCCCCccccccc-ccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSE-GHYIIASDWKKNEHMTEDM-FCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~-~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
...+++|+|+|+ |++|+.+++.|++. +++|++++|+.++...... .++..+..|+.+.+.+.++++++|+|||+++.
T Consensus 20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~ 98 (467)
T 2axq_A 20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPY 98 (467)
T ss_dssp ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence 345689999997 99999999999998 7899999998654322211 24566788999888888888999999999985
Q ss_pred cCCccccc---CCcceehhhhH--HHHHHHHHHHHhCCC
Q 017290 101 MGGMGFIQ---SNHSVIMYNNT--MISFNMLEASRISGV 134 (374)
Q Consensus 101 ~~~~~~~~---~~~~~~~~~n~--~~~~~ll~a~~~~~~ 134 (374)
........ .....+++.+. .....+++++++.|+
T Consensus 99 ~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv 137 (467)
T 2axq_A 99 TFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGI 137 (467)
T ss_dssp GGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTC
T ss_pred hhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCC
Confidence 31100000 00011222221 235677777777776
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.33 E-value=2.2e-06 Score=67.62 Aligned_cols=73 Identities=7% Similarity=-0.080 Sum_probs=61.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhh-ccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~ 99 (374)
.++|+|+| .|.+|+.+++.|.+.|++|+++++++.........++.++.+|.++.+.+.++ ++++|.||-+.+
T Consensus 7 ~~~viIiG-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 7 CNHALLVG-YGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred CCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence 46799999 59999999999999999999999998765444445778999999999888765 568999998876
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=3.4e-06 Score=71.58 Aligned_cols=73 Identities=15% Similarity=0.037 Sum_probs=54.8
Q ss_pred CCCCeEEEEcC----------------cchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhh
Q 017290 24 SEKLRISVTGA----------------GGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87 (374)
Q Consensus 24 ~~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~ 87 (374)
..+++|||||| +|.+|.++++.|+++|++|+++.++..-.. ..+ ....|+.+.+++.+.
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~~---~~g--~~~~dv~~~~~~~~~ 80 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT---PPF--VKRVDVMTALEMEAA 80 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC---CTT--EEEEECCSHHHHHHH
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccccc---CCC--CeEEccCcHHHHHHH
Confidence 46799999999 699999999999999999999987653111 112 234577765555443
Q ss_pred ----ccCCCEEEEccccc
Q 017290 88 ----TKGVDHVFNLAADM 101 (374)
Q Consensus 88 ----~~~~d~vi~~a~~~ 101 (374)
+.++|++||+|+..
T Consensus 81 v~~~~~~~Dili~~Aav~ 98 (226)
T 1u7z_A 81 VNASVQQQNIFIGCAAVA 98 (226)
T ss_dssp HHHHGGGCSEEEECCBCC
T ss_pred HHHhcCCCCEEEECCccc
Confidence 34799999999965
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=98.25 E-value=1.8e-05 Score=72.25 Aligned_cols=79 Identities=13% Similarity=-0.029 Sum_probs=61.3
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHH-hCCCEEEEEeCCCCccccc------------------ccccceeEEecccchhh
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLK-SEGHYIIASDWKKNEHMTE------------------DMFCHEFHLVDLRVMDN 83 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~------------------~~~~i~~~~~dl~~~~~ 83 (374)
...+|++|||||+.-+|.+.+..|. ..|..|+++.+........ .......+.+|+.+.+.
T Consensus 47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~ 126 (401)
T 4ggo_A 47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI 126 (401)
T ss_dssp SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence 3467999999999999999999988 5799999988765432211 11235678999999887
Q ss_pred Hhhhcc-------CCCEEEEccccc
Q 017290 84 CLKVTK-------GVDHVFNLAADM 101 (374)
Q Consensus 84 ~~~~~~-------~~d~vi~~a~~~ 101 (374)
+.++++ ++|++||+++..
T Consensus 127 i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 127 KAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred HHHHHHHHHHhcCCCCEEEEecccc
Confidence 777664 789999999964
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=98.22 E-value=2e-06 Score=74.29 Aligned_cols=72 Identities=11% Similarity=0.049 Sum_probs=59.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhh-ccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~ 99 (374)
..++|+|+|+ |.+|+.+++.|.+.|+ |+++++++....... .++.++.+|.++.+.+.++ ++++|.||.+.+
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence 3478999996 9999999999999999 999998876543333 5678999999999988877 789999998875
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=8.8e-06 Score=76.13 Aligned_cols=96 Identities=16% Similarity=0.143 Sum_probs=75.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhh-ccCCCEEEEcccccCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAADMGG 103 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~~~~~ 103 (374)
..++|+|+| .|.+|+.+++.|.+.|++|+++++++.........++.++.+|.++.+.+..+ ++++++||-+..
T Consensus 3 ~~~~viIiG-~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~---- 77 (413)
T 3l9w_A 3 HGMRVIIAG-FGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID---- 77 (413)
T ss_dssp -CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS----
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC----
Confidence 347899999 59999999999999999999999998765555556788999999999999887 679999998875
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEE
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFY 139 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~ 139 (374)
+......++..+++.+.+ ++|-
T Consensus 78 --------------~~~~n~~i~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 78 --------------DPQTNLQLTEMVKEHFPHLQIIA 100 (413)
T ss_dssp --------------SHHHHHHHHHHHHHHCTTCEEEE
T ss_pred --------------ChHHHHHHHHHHHHhCCCCeEEE
Confidence 223344566677776654 4443
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=98.01 E-value=1.3e-05 Score=70.34 Aligned_cols=92 Identities=13% Similarity=0.261 Sum_probs=58.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhC-CCEEEE-EeCCCCcccccc---cccceeEEecccchhhHhhhccCCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSE-GHYIIA-SDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~-g~~V~~-~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
|.|+||.|+|++|.+|+.+++.+.+. ++++.+ ++|+++...... ..++. . ++.-.+++.++++++|+||+++
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~--~-gv~v~~dl~~ll~~~DVVIDfT 81 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQ--T-GVALTDDIERVCAEADYLIDFT 81 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCC--C-SCBCBCCHHHHHHHCSEEEECS
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCC--C-CceecCCHHHHhcCCCEEEEcC
Confidence 35689999999999999999999876 677776 566643211100 00111 0 2222344556666899999997
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEE
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i 138 (374)
.+ ..+...++.|.++|+ ++|
T Consensus 82 ~p-------------------~a~~~~~~~al~~G~-~vV 101 (272)
T 4f3y_A 82 LP-------------------EGTLVHLDAALRHDV-KLV 101 (272)
T ss_dssp CH-------------------HHHHHHHHHHHHHTC-EEE
T ss_pred CH-------------------HHHHHHHHHHHHcCC-CEE
Confidence 42 234566777888887 455
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.98 E-value=3.9e-05 Score=69.81 Aligned_cols=94 Identities=18% Similarity=0.118 Sum_probs=57.6
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCC---EEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGH---YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
+|+|+|.||+|++|+.+++.|++++| ++..+....+........+..+...|+ +.+ .++++|+||.|.+..
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g~~i~~~~~-~~~----~~~~~DvV~~a~g~~- 79 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDV-DSF----DFSSVGLAFFAAAAE- 79 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEG-GGC----CGGGCSEEEECSCHH-
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccCCcceEEecC-CHH----HhcCCCEEEEcCCcH-
Confidence 47899999999999999999997665 455554221111100011111111222 111 246899999998731
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
.+..++..+.+.|+ ++|-+|+..
T Consensus 80 ------------------~s~~~a~~~~~aG~-kvId~Sa~~ 102 (340)
T 2hjs_A 80 ------------------VSRAHAERARAAGC-SVIDLSGAL 102 (340)
T ss_dssp ------------------HHHHHHHHHHHTTC-EEEETTCTT
T ss_pred ------------------HHHHHHHHHHHCCC-EEEEeCCCC
Confidence 13566777788887 577777754
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.97 E-value=1.2e-05 Score=73.42 Aligned_cols=96 Identities=17% Similarity=0.101 Sum_probs=60.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-----C-EEEEEeCCCC--cccccc---ccc-ceeEEecccchhhHhhhccCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-----H-YIIASDWKKN--EHMTED---MFC-HEFHLVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-----~-~V~~~~r~~~--~~~~~~---~~~-i~~~~~dl~~~~~~~~~~~~~d 92 (374)
+||||+|.||||++|+.+++.|++++ + +|+.+.+..+ +..... ..+ ......++ +. +.+.++|
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~-~~----~~~~~~D 82 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPT-EA----AVLGGHD 82 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEEC-CH----HHHTTCS
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccC-CH----HHhcCCC
Confidence 45799999999999999999999887 4 7777754322 111100 001 01111222 11 2245899
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccccc
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy 146 (374)
+||.|.+... +..++..+ +.|+ ++|-+|+..-+
T Consensus 83 vVf~alg~~~-------------------s~~~~~~~-~~G~-~vIDlSa~~R~ 115 (352)
T 2nqt_A 83 AVFLALPHGH-------------------SAVLAQQL-SPET-LIIDCGADFRL 115 (352)
T ss_dssp EEEECCTTSC-------------------CHHHHHHS-CTTS-EEEECSSTTTC
T ss_pred EEEECCCCcc-------------------hHHHHHHH-hCCC-EEEEECCCccC
Confidence 9999987421 24566677 7776 79989886543
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.94 E-value=7e-06 Score=74.54 Aligned_cols=166 Identities=14% Similarity=0.122 Sum_probs=95.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCcccc----cccccceeEEecccchhhHhhhccCCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMT----EDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
.++||.|+|++|++|+.++..|+..| .+|.+++....+... ... . .+...++....++.++++++|+||.++
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~-~-~~~~~~i~~t~d~~~al~dADvVvita 84 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRH-C-GFEGLNLTFTSDIKEALTDAKYIVSSG 84 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHH-H-CCTTCCCEEESCHHHHHTTEEEEEECC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhh-C-cCCCCceEEcCCHHHHhCCCCEEEEcc
Confidence 56899999999999999999999988 589999986542111 000 0 000012222234566788999999999
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCe--EEEeeccc---ccCCCcccccccCCCCCCCCCCCCCCchH
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKR--FFYASSAC---IYPEFKQLETNVSLKESDAWPAEPQDAYG 173 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~--~i~~Ss~~---vy~~~~~~~~~~~~~e~~~~~~~~~~~y~ 173 (374)
|.... ......+.+..|+...+.+++.+.+.+.+- ++.+|... +|- ....+ ...+....+
T Consensus 85 G~p~k---pG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPvd~~t~i----------~~k~s--g~p~~rv~g 149 (343)
T 3fi9_A 85 GAPRK---EGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADITGLV----------TLIYS--GLKPSQVTT 149 (343)
T ss_dssp C----------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSHHHHHHH----------HHHHH--TCCGGGEEE
T ss_pred CCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCchHHHHHH----------HHHHc--CCCcceEEE
Confidence 85432 122345567789999999999998887553 45555411 000 00000 111122233
Q ss_pred HhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCC
Q 017290 174 LEKLASEELCKHYTKDFGIECRVGRFHNIYGPFG 207 (374)
Q Consensus 174 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~ 207 (374)
.+.+..-++....++..+++...++-..|+|.++
T Consensus 150 ~t~LDs~R~~~~la~~l~v~~~~v~~~~ViGeHg 183 (343)
T 3fi9_A 150 LAGLDSTRLQSELAKHFGIKQSLVTNTRTYGGHG 183 (343)
T ss_dssp ECCHHHHHHHHHHHHHHTSCGGGEECCCEEESSG
T ss_pred ecCcHHHHHHHHHHHHhCcCHHHcccceEEEcCC
Confidence 4444444444555555666655555456777654
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=4e-05 Score=69.51 Aligned_cols=118 Identities=14% Similarity=0.087 Sum_probs=74.3
Q ss_pred CCCCCCCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccc---ccccee--EEecccchhhHhhhccCCCE
Q 017290 20 PYWPSEKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTED---MFCHEF--HLVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 20 ~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~---~~~i~~--~~~dl~~~~~~~~~~~~~d~ 93 (374)
++|..++|||.|+|| |.+|..++..|...|+ +|+++++++....... ...... ....+.-..++.++++++|+
T Consensus 3 ~~~~~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDi 81 (331)
T 1pzg_A 3 PALVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADC 81 (331)
T ss_dssp CCCCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSE
T ss_pred cCcCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCE
Confidence 446656789999997 9999999999999998 9999999875322200 000000 01122112345557889999
Q ss_pred EEEcccccCCccc--ccCCcceehhhhHHHHHHHHHHHHhCCCCeEE
Q 017290 94 VFNLAADMGGMGF--IQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138 (374)
Q Consensus 94 vi~~a~~~~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i 138 (374)
||.+++.....+. +..........|+...+.+.+.+.+...+-++
T Consensus 82 Vi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~v 128 (331)
T 1pzg_A 82 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFI 128 (331)
T ss_dssp EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred EEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEE
Confidence 9999975432111 00023344566788888888888877644333
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=2.2e-05 Score=70.86 Aligned_cols=109 Identities=19% Similarity=0.172 Sum_probs=74.5
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccc----cc----c--ccceeEEecccchhhHhhhccC
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMT----ED----M--FCHEFHLVDLRVMDNCLKVTKG 90 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~----~--~~i~~~~~dl~~~~~~~~~~~~ 90 (374)
+..+|||.|+|+ |.+|..++..|+..|+ +|++++++..+... .. . ..+.+...| .+.+++
T Consensus 2 ~~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~ 73 (326)
T 3pqe_A 2 NKHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKD 73 (326)
T ss_dssp CCSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTT
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCC
Confidence 445689999995 9999999999999886 89999987543111 00 0 122222222 246789
Q ss_pred CCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 91 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
+|+||.+++.... ......+.+..|+...+.+++.+.+...+ .++.+|.
T Consensus 74 aDvVvi~ag~p~k---pG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 74 ADIVCICAGANQK---PGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp CSEEEECCSCCCC---TTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCEEEEecccCCC---CCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 9999999985321 12234456778999999999999888755 5555554
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.86 E-value=6.2e-05 Score=68.60 Aligned_cols=96 Identities=10% Similarity=-0.033 Sum_probs=60.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCccccccc--cccee-EEecccchhhHhhhccCCCEEEEcccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDM--FCHEF-HLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~--~~i~~-~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
+|+||.|.||+|++|+.+++.|.++. .+|+.+.+..+....... ..+.- ....+.+.+ . +.++|+||.|++.
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~---~-~~~vDvV~~a~g~ 78 (345)
T 2ozp_A 3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPE---K-LEPADILVLALPH 78 (345)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGG---G-CCCCSEEEECCCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchh---H-hcCCCEEEEcCCc
Confidence 45899999999999999999998875 488877764332211110 00000 001112222 2 4789999999874
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
.. +..++..+.+.|+ ++|-+|+..
T Consensus 79 ~~-------------------s~~~a~~~~~aG~-~VId~Sa~~ 102 (345)
T 2ozp_A 79 GV-------------------FAREFDRYSALAP-VLVDLSADF 102 (345)
T ss_dssp TH-------------------HHHTHHHHHTTCS-EEEECSSTT
T ss_pred HH-------------------HHHHHHHHHHCCC-EEEEcCccc
Confidence 21 3455667778887 688888853
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=3.9e-06 Score=71.19 Aligned_cols=72 Identities=14% Similarity=0.150 Sum_probs=49.5
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccc-cceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMF-CHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|+|+|+||+|.+|+.+++.|++.|++|++++|++.+....... +..+...|+. .+.+.++++++|+||++..
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~~~ 73 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLTIP 73 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEeCC
Confidence 6899999999999999999999999999999986532221110 1000001222 2345556778999999986
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.78 E-value=1.4e-05 Score=73.19 Aligned_cols=75 Identities=16% Similarity=0.201 Sum_probs=53.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-----CCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-----GVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-----~~d~vi~~a 98 (374)
...++|||+|++|-||..+++.+...|++|++++|++.+.......+... ..|+.+.+++.+.++ ++|+||+++
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 246 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEV-FIDFTKEKDIVGAVLKATDGGAHGVINVS 246 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCE-EEETTTCSCHHHHHHHHHTSCEEEEEECS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCce-EEecCccHhHHHHHHHHhCCCCCEEEECC
Confidence 35689999999999999999999999999999998876543222223322 236553333333322 689999998
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
+
T Consensus 247 g 247 (347)
T 2hcy_A 247 V 247 (347)
T ss_dssp S
T ss_pred C
Confidence 7
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=97.78 E-value=3.5e-05 Score=70.23 Aligned_cols=92 Identities=11% Similarity=0.031 Sum_probs=71.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhh-ccCCCEEEEcccccCCc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAADMGGM 104 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~~~~~~ 104 (374)
.++|+|+|+ |.+|+.+++.|.+.|+ |+++++++.... ....++.++.+|.++.+.+.++ ++++|.||-+.+.
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~---- 187 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLES---- 187 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSS----
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCc----
Confidence 468999995 9999999999999999 999999887655 4445789999999999999887 7899999987651
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEE
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFF 138 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i 138 (374)
-.....++..+++.+.+ +++
T Consensus 188 --------------d~~n~~~~~~ar~~~~~~~ii 208 (336)
T 1lnq_A 188 --------------DSETIHCILGIRKIDESVRII 208 (336)
T ss_dssp --------------HHHHHHHHHHHHTTCTTSEEE
T ss_pred --------------cHHHHHHHHHHHHHCCCCeEE
Confidence 12223455667777765 544
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=97.76 E-value=1.5e-05 Score=66.63 Aligned_cols=75 Identities=25% Similarity=0.215 Sum_probs=52.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhh---Hhhhc--cCCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDN---CLKVT--KGVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~---~~~~~--~~~d~vi~~a 98 (374)
..+++|||+||+|-||..+++.+...|++|++++|++.+.......+... ..|..+.+. +.+.. +++|+||+++
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 115 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEY-VGDSRSVDFADEILELTDGYGVDVVLNSL 115 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSE-EEETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEEECC
Confidence 35689999999999999999999999999999998765432222222222 235554433 23323 2699999998
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
+
T Consensus 116 g 116 (198)
T 1pqw_A 116 A 116 (198)
T ss_dssp C
T ss_pred c
Confidence 6
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00024 Score=64.93 Aligned_cols=94 Identities=15% Similarity=0.113 Sum_probs=57.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCC---EEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGH---YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
+++|.|+||||++|..|++.|.+++| ++..+....+........+.....-++. . ..++++|+||.|++..
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~~~~~~~~~-~----~~~~~~Dvvf~a~~~~- 75 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETT-E----TAFEGVDIALFSAGSS- 75 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTEEEEEEECC-T----TTTTTCSEEEECSCHH-
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCCCceEeeCC-H----HHhcCCCEEEECCChH-
Confidence 57999999999999999998888766 3444443322111111111111111111 1 2356899999998731
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
.+......+.+.|+ ++|=+|+..
T Consensus 76 ------------------~s~~~a~~~~~~G~-~vIDlSa~~ 98 (366)
T 3pwk_A 76 ------------------TSAKYAPYAVKAGV-VVVDNTSYF 98 (366)
T ss_dssp ------------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred ------------------hHHHHHHHHHHCCC-EEEEcCCcc
Confidence 13455666677887 688888754
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00018 Score=65.29 Aligned_cols=95 Identities=13% Similarity=0.094 Sum_probs=59.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC---CEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG---HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
+|+||+|.||+|++|+.+++.|++++ .+|+.+....+........+..+...++. .+ .++++|+||.|.+..
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~-~~----~~~~vDvVf~a~g~~ 76 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVE-EF----DWSQVHIALFSAGGE 76 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGG-GC----CGGGCSEEEECSCHH
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCC-hH----HhcCCCEEEECCCch
Confidence 46899999999999999999999874 46776663221111111111122122221 11 235899999998732
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
.+......+.+.|+ ++|-.|+..
T Consensus 77 -------------------~s~~~a~~~~~~G~-~vId~s~~~ 99 (336)
T 2r00_A 77 -------------------LSAKWAPIAAEAGV-VVIDNTSHF 99 (336)
T ss_dssp -------------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred -------------------HHHHHHHHHHHcCC-EEEEcCCcc
Confidence 13556667778887 788888763
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=5.7e-05 Score=67.87 Aligned_cols=112 Identities=17% Similarity=0.121 Sum_probs=68.8
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccc---cccc--eeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTED---MFCH--EFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~---~~~i--~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
+|||.|+|+ |++|..++..|+..|+ +|.++++++.+..... .... ......+....++ +.++++|+||.+++
T Consensus 2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g 79 (309)
T 1ur5_A 2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSG 79 (309)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCC
Confidence 479999998 9999999999999997 9999998764321100 0000 0000111111223 46789999999998
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
.....+ .........|+...+.+.+.+.+...+.+|.+.|
T Consensus 80 ~p~~~g---~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t 119 (309)
T 1ur5_A 80 APRKPG---MSREDLIKVNADITRACISQAAPLSPNAVIIMVN 119 (309)
T ss_dssp C-----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred CCCCCC---CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence 543211 1223345668888888999888887655554444
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.70 E-value=6.8e-05 Score=68.71 Aligned_cols=97 Identities=15% Similarity=0.161 Sum_probs=60.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCccccccc--ccce-eEEecccchhhHhhhccCCCEEEEcccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDM--FCHE-FHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~--~~i~-~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
+++||+|.||+|++|+.+++.|.++. .+|..+.+..+....... ..+. .+..|+.-.+ .+.++++|+||.|++.
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~--~~~~~~vDvVf~atp~ 92 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK--DADFSTVDAVFCCLPH 92 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG--GCCGGGCSEEEECCCT
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc--hhHhcCCCEEEEcCCc
Confidence 44789999999999999999999875 488877654332111110 0000 0012332222 3345689999999874
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
.. +......+ +.|+ ++|-.|+..
T Consensus 93 ~~-------------------s~~~a~~~-~aG~-~VId~sa~~ 115 (359)
T 1xyg_A 93 GT-------------------TQEIIKEL-PTAL-KIVDLSADF 115 (359)
T ss_dssp TT-------------------HHHHHHTS-CTTC-EEEECSSTT
T ss_pred hh-------------------HHHHHHHH-hCCC-EEEECCccc
Confidence 21 24455566 7776 688888753
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=9.7e-05 Score=66.57 Aligned_cols=108 Identities=13% Similarity=0.102 Sum_probs=73.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccc----ccc------ccceeEEecccchhhHhhhccCCCE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMT----EDM------FCHEFHLVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----~~~------~~i~~~~~dl~~~~~~~~~~~~~d~ 93 (374)
.+|||.|+|+ |.+|..++..|+..|+ +|+++++++.+... ... ....+... .+. ++++++|+
T Consensus 6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t-----~d~-~a~~~aDi 78 (324)
T 3gvi_A 6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA-----NDY-AAIEGADV 78 (324)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-----SSG-GGGTTCSE
T ss_pred cCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe-----CCH-HHHCCCCE
Confidence 5689999997 9999999999999998 99999998764210 000 01122111 112 57889999
Q ss_pred EEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 94 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 94 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
||.+++.....+ ....+.+..|+...+.+++.+.+.+.+ .+|.+|.
T Consensus 79 VIiaag~p~k~G---~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 79 VIVTAGVPRKPG---MSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp EEECCSCCCC--------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EEEccCcCCCCC---CCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 999998543222 233456777998899999998887754 5665554
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=5.6e-05 Score=64.19 Aligned_cols=67 Identities=13% Similarity=0.151 Sum_probs=48.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
.++|+|+|+| +|.+|+.+++.|.+.|++|++++|++.........++.+. .+.++++++|+||.+..
T Consensus 26 ~~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~--------~~~~~~~~~DvVi~av~ 92 (215)
T 2vns_A 26 DEAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT--------FQEEAVSSPEVIFVAVF 92 (215)
T ss_dssp ---CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE--------EHHHHTTSCSEEEECSC
T ss_pred CCCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee--------cHHHHHhCCCEEEECCC
Confidence 3568999999 8999999999999999999999998654322222233321 24456778999998876
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.60 E-value=3.9e-05 Score=70.80 Aligned_cols=75 Identities=13% Similarity=0.085 Sum_probs=57.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc-ccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM-FCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
..+++|+|+|+ |.||+.+++.|...|++|++++|++.+...... .+.. +..|..+.+.+.+.++++|+||++++.
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKSVQHADLLIGAVLV 239 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHHHhCCCEEEECCCC
Confidence 35689999998 999999999999999999999998654322111 1222 445666777788888899999999984
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00015 Score=65.66 Aligned_cols=95 Identities=18% Similarity=0.164 Sum_probs=59.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCCC---Cccccc-------ccc-cceeEEecccchhhHhhhccCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSE-GHYIIASDWKK---NEHMTE-------DMF-CHEFHLVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~---~~~~~~-------~~~-~i~~~~~dl~~~~~~~~~~~~~d 92 (374)
.|+||.|+|+||++|+.+++.|.++ .+++..+.++. +..... ... ...+... .+ ..++.+++|
T Consensus 3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~---~~~~~~~~D 77 (337)
T 3dr3_A 3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SD---ISEFSPGVD 77 (337)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SS---GGGTCTTCS
T ss_pred CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CC---HHHHhcCCC
Confidence 4689999999999999999999985 57888775543 211111 000 1111111 01 223337899
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
+||.|.+.. .+..+...+.+.|+ ++|=+|+..
T Consensus 78 vvf~a~p~~-------------------~s~~~~~~~~~~g~-~vIDlSa~f 109 (337)
T 3dr3_A 78 VVFLATAHE-------------------VSHDLAPQFLEAGC-VVFDLSGAF 109 (337)
T ss_dssp EEEECSCHH-------------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred EEEECCChH-------------------HHHHHHHHHHHCCC-EEEEcCCcc
Confidence 999988631 13455666677887 788888863
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.58 E-value=8.2e-05 Score=70.66 Aligned_cols=74 Identities=14% Similarity=0.138 Sum_probs=61.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-cccceeEEecccchhhHhhh-ccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~ 99 (374)
..|+|+|.| .|.+|+++++.|.+.||+|+++++++....... ..++.++.||-++++.++++ ++++|.+|-+..
T Consensus 2 ~~M~iiI~G-~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~ 77 (461)
T 4g65_A 2 NAMKIIILG-AGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTN 77 (461)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCS
T ss_pred CcCEEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcC
Confidence 358999999 699999999999999999999999876544332 33678999999999999887 478999886654
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=9.6e-05 Score=65.66 Aligned_cols=106 Identities=11% Similarity=0.020 Sum_probs=73.1
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCccc----cccc------ccceeEEecccchhhHhhhccCCCEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHM----TEDM------FCHEFHLVDLRVMDNCLKVTKGVDHV 94 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~----~~~~------~~i~~~~~dl~~~~~~~~~~~~~d~v 94 (374)
|||.|+|+ |.+|..++..|+..|+ +|.++++++.... +... ....+... .+ .++++++|+|
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t-----~d-~~a~~~aDiV 73 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG-----AD-YSLLKGSEII 73 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE-----SC-GGGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe-----CC-HHHhCCCCEE
Confidence 68999998 9999999999999988 9999999875421 0000 01111111 11 4578899999
Q ss_pred EEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 95 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
|.+++..... .....+.+..|....+.+.+.+.+.+.+ .++.+|.
T Consensus 74 Viaag~~~kp---G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN 119 (294)
T 1oju_A 74 VVTAGLARKP---GMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp EECCCCCCCS---SCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred EECCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 9999854321 2234456778888899999999988755 5555554
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.54 E-value=6.1e-05 Score=66.96 Aligned_cols=67 Identities=15% Similarity=0.163 Sum_probs=49.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
+||+|.|+|++|.+|+.+++.|.+.|++|++++|++.........++.. . ...++++++|+||.+..
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~-----~---~~~~~~~~aDvVi~av~ 76 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPL-----T---DGDGWIDEADVVVLALP 76 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCC-----C---CSSGGGGTCSEEEECSC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCc-----C---CHHHHhcCCCEEEEcCC
Confidence 4689999998899999999999999999999998765422221122221 1 23345678999999875
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=7.8e-05 Score=67.17 Aligned_cols=110 Identities=16% Similarity=0.094 Sum_probs=65.4
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCccc-------cccc--ccceeEEecccchhhHhhhccC
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHM-------TEDM--FCHEFHLVDLRVMDNCLKVTKG 90 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~-------~~~~--~~i~~~~~dl~~~~~~~~~~~~ 90 (374)
.+..++||.|+|+ |.+|+.++..|+..|. +|+++++++.... +... ..+.+...| .+.+++
T Consensus 5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~ 76 (326)
T 3vku_A 5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKD 76 (326)
T ss_dssp --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTT
T ss_pred ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcC
Confidence 4557789999995 9999999999999886 8999998654211 0000 122222221 345789
Q ss_pred CCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 91 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
+|+||.+|+.... ......+.+..|+...+.+.+.+.+...+ .++.+|.
T Consensus 77 aDiVvi~ag~~~k---pG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN 126 (326)
T 3vku_A 77 ADLVVITAGAPQK---PGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp CSEEEECCCCC-------------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred CCEEEECCCCCCC---CCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence 9999999985432 12234566778988899999999888755 4555543
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00022 Score=63.89 Aligned_cols=164 Identities=13% Similarity=0.076 Sum_probs=95.0
Q ss_pred CeEEEEcCcchhHHHHHHHHHhC-C--CEEEEEeCCCCcc---cccccc--cceeEEecccchhhHhhhccCCCEEEEcc
Q 017290 27 LRISVTGAGGFIASHIARRLKSE-G--HYIIASDWKKNEH---MTEDMF--CHEFHLVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~---~~~~~~--~i~~~~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
|||.|+||+|.+|..++..|... + .++..+++.+... .+.... ...+... .. +...+.++++|+||.+|
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDivii~a 77 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SG--EDATPALEGADVVLISA 77 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEE-CS--SCCHHHHTTCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEe-cC--CCcHHHhCCCCEEEEeC
Confidence 68999999999999999988775 5 5899999876210 001110 1111100 00 12345678999999999
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeeccc---ccCCCcccccccCCCCCCCCCC-CCCCchH
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASSAC---IYPEFKQLETNVSLKESDAWPA-EPQDAYG 173 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss~~---vy~~~~~~~~~~~~~e~~~~~~-~~~~~y~ 173 (374)
+.... ......+.+..|....+.+.+.+.+...+ .++.+|... +|--.. ..... .. .+....|
T Consensus 78 g~~rk---pG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd~~t~~a~~-------~~k~s--g~~p~~rv~G 145 (312)
T 3hhp_A 78 GVARK---PGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAE-------VLKKA--GVYDKNKLFG 145 (312)
T ss_dssp SCSCC---TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHHHHH-------HHHHT--TCCCTTSEEE
T ss_pred CCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcchhHHHHHHH-------HHHHc--CCCCcceEEE
Confidence 85432 22345667888999999999998887654 566555411 010000 00001 11 2334455
Q ss_pred HhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCC
Q 017290 174 LEKLASEELCKHYTKDFGIECRVGRFHNIYGPF 206 (374)
Q Consensus 174 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~ 206 (374)
...+..-++....++..+++...++ ..|+|.+
T Consensus 146 ~~~LD~~R~~~~la~~lgv~~~~v~-~~V~G~H 177 (312)
T 3hhp_A 146 VTTLDIIRSNTFVAELKGKQPGEVE-VPVIGGH 177 (312)
T ss_dssp CCHHHHHHHHHHHHHHHTCCGGGCC-CCEEECS
T ss_pred EechhHHHHHHHHHHHhCcChhHcc-eeEEecc
Confidence 5533333444444555666666666 6788876
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00042 Score=60.97 Aligned_cols=92 Identities=12% Similarity=0.228 Sum_probs=58.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhC-CCEEEEE-eCCCCcccccc---cccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSE-GHYIIAS-DWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
+++||.|.|++|.+|+.+++.+.+. +.++.++ +|+++...... ..++. ..++.-.+++.+++.++|+||++..
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~--~~gv~v~~dl~~ll~~aDVvIDFT~ 97 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSD--FLGVRITDDPESAFSNTEGILDFSQ 97 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCS--CCSCBCBSCHHHHTTSCSEEEECSC
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccC--cCCceeeCCHHHHhcCCCEEEEcCC
Confidence 5679999999999999999999875 6776655 56543211100 00110 1122223455667779999999985
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEE
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i 138 (374)
+ ..+...++.|.++|+ .+|
T Consensus 98 p-------------------~a~~~~~~~~l~~Gv-~vV 116 (288)
T 3ijp_A 98 P-------------------QASVLYANYAAQKSL-IHI 116 (288)
T ss_dssp H-------------------HHHHHHHHHHHHHTC-EEE
T ss_pred H-------------------HHHHHHHHHHHHcCC-CEE
Confidence 2 234566778888887 455
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00026 Score=64.75 Aligned_cols=98 Identities=17% Similarity=0.175 Sum_probs=57.0
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcc-ccccc--ccc-----eeEEecccch-hhHhhhcc-CCCEE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEH-MTEDM--FCH-----EFHLVDLRVM-DNCLKVTK-GVDHV 94 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~~--~~i-----~~~~~dl~~~-~~~~~~~~-~~d~v 94 (374)
++||.|.||+|++|+.+++.|.+++ .+|.++.+++... ..... ... .....|+.-. .+..+.++ ++|+|
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV 87 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIV 87 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEE
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEE
Confidence 4799999999999999999998874 6888886432211 11000 000 0000111100 01222335 89999
Q ss_pred EEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecc
Q 017290 95 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~ 143 (374)
|.|.+.. .+..++..+.+.|+ ++|-.|+.
T Consensus 88 ~~atp~~-------------------~~~~~a~~~~~aG~-~VId~s~~ 116 (354)
T 1ys4_A 88 FSALPSD-------------------LAKKFEPEFAKEGK-LIFSNASA 116 (354)
T ss_dssp EECCCHH-------------------HHHHHHHHHHHTTC-EEEECCST
T ss_pred EECCCch-------------------HHHHHHHHHHHCCC-EEEECCch
Confidence 9998731 13445666677887 57766664
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0012 Score=51.47 Aligned_cols=87 Identities=16% Similarity=0.258 Sum_probs=59.5
Q ss_pred CCCeEEEEcCc---chhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 25 EKLRISVTGAG---GFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 25 ~~~~ilItGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
+.++|.|+|++ |.+|..+++.|++.||+|+.++.+.... .++ .-...+.++.+.+|++|-+...
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----~G~-------~~~~s~~el~~~vDlvii~vp~- 79 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----EGL-------KCYRSVRELPKDVDVIVFVVPP- 79 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----TTE-------ECBSSGGGSCTTCCEEEECSCH-
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----CCe-------eecCCHHHhCCCCCEEEEEeCH-
Confidence 56889999987 9999999999999999988877664221 121 2223344455678999888752
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
.....+++.+.+.|++.++..++
T Consensus 80 ------------------~~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 80 ------------------KVGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp ------------------HHHHHHHHHHHHTTCCEEEECTT
T ss_pred ------------------HHHHHHHHHHHHcCCCEEEEcCc
Confidence 22455666677788877665543
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00022 Score=64.17 Aligned_cols=108 Identities=11% Similarity=-0.010 Sum_probs=73.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccc----ccc------ccceeEEecccchhhHhhhccCCCE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMT----EDM------FCHEFHLVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----~~~------~~i~~~~~dl~~~~~~~~~~~~~d~ 93 (374)
.+|||.|+| +|.+|..++..|+..+. +|+++++++..... ... ....+...+ + .++++++|+
T Consensus 4 ~~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d----~~a~~~aDv 76 (321)
T 3p7m_A 4 ARKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--D----YKDLENSDV 76 (321)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--C----GGGGTTCSE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--C----HHHHCCCCE
Confidence 468999999 59999999999999888 99999998754210 000 011222111 1 247889999
Q ss_pred EEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 94 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 94 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
||.+++..... .....+.+..|+...+.+++.+.+...+ .+|.+|.
T Consensus 77 VIi~ag~p~k~---G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 123 (321)
T 3p7m_A 77 VIVTAGVPRKP---GMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITN 123 (321)
T ss_dssp EEECCSCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EEEcCCcCCCC---CCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 99999854322 1233455677999999999998887755 5565544
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00046 Score=64.73 Aligned_cols=94 Identities=11% Similarity=0.145 Sum_probs=65.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhC-CC---EEEEEeCCCCcccccccccceeEEecccch---hhHhhhccCCCEEEEcc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSE-GH---YIIASDWKKNEHMTEDMFCHEFHLVDLRVM---DNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~-g~---~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~---~~~~~~~~~~d~vi~~a 98 (374)
.++|+|+| .|-||+.++..|.++ ++ .|++.+............++.+...++++. +.+..++++.|+||+++
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~s 91 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFLIDVS 91 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEEEECC
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEEEECC
Confidence 47899999 899999999999986 55 688887665432212222455666666443 33556777679999977
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEe
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYA 140 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~ 140 (374)
.+.. ...++++|.+.|+ ++|=+
T Consensus 92 ~~~~-------------------~l~Im~acleaGv-~YlDT 113 (480)
T 2ph5_A 92 IGIS-------------------SLALIILCNQKGA-LYINA 113 (480)
T ss_dssp SSSC-------------------HHHHHHHHHHHTC-EEEES
T ss_pred cccc-------------------CHHHHHHHHHcCC-CEEEC
Confidence 5321 3578999999998 56533
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00025 Score=63.85 Aligned_cols=167 Identities=14% Similarity=0.093 Sum_probs=88.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccccc---cccceeE-EecccchhhHhhhccCCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTED---MFCHEFH-LVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~---~~~i~~~-~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
++|||.|+|+ |++|..++-.|+..+. +|.+++.++.+..... .....+. ...+.. +. .++++++|+||.++
T Consensus 6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~~-~~a~~~aDvVii~~ 82 (318)
T 1y6j_A 6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA-GD-YSDVKDCDVIVVTA 82 (318)
T ss_dssp -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC---C-GGGGTTCSEEEECC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE-CC-HHHhCCCCEEEEcC
Confidence 4589999997 9999999999999987 9999998865422100 0000000 001111 11 34588999999999
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHH-hHH
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGL-EKL 177 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~-sK~ 177 (374)
+..... .....+....|+.....+++.+.+....-+|.+.|--+--... ...... ...+....|. +-+
T Consensus 83 g~p~k~---g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~~~------~~~k~s--~~p~~rviG~gt~L 151 (318)
T 1y6j_A 83 GANRKP---GETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITY------MIQKWS--GLPVGKVIGSGTVL 151 (318)
T ss_dssp CC---------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHH------HHHHHH--TCCTTTEEECTTHH
T ss_pred CCCCCC---CcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHH------HHHHHc--CCCHHHEeccCCch
Confidence 853211 1123345677888889999988887644333333311100000 000000 1122334444 334
Q ss_pred HHHHHHHHHHhhhCCcEEEEeeCcccCCC
Q 017290 178 ASEELCKHYTKDFGIECRVGRFHNIYGPF 206 (374)
Q Consensus 178 ~~E~~~~~~~~~~~~~~~ilR~~~v~g~~ 206 (374)
..-++....++..+++..-+.. .+.|.+
T Consensus 152 d~~r~~~~la~~lgv~~~~v~~-~v~G~H 179 (318)
T 1y6j_A 152 DSIRFRYLLSEKLGVDVKNVHG-YIIGEH 179 (318)
T ss_dssp HHHHHHHHHHTTTTCCTTTEEC-CEEBCS
T ss_pred HHHHHHHHHHHHhCCCHHHeEE-EEeccc
Confidence 4344445555556665555554 677765
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00064 Score=58.56 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=28.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSE-GHYIIASDWK 59 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~ 59 (374)
|||+|+|++|.+|+.+++.+.+. +++|.++...
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~ 34 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA 34 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEcc
Confidence 58999999999999999999876 8998866543
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0015 Score=59.89 Aligned_cols=93 Identities=14% Similarity=0.097 Sum_probs=54.5
Q ss_pred CCeEEEEcCcchhHHHHHHH-HHhCCC---EEEEEeCCCCcccccc-cccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 26 KLRISVTGAGGFIASHIARR-LKSEGH---YIIASDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~-L~~~g~---~V~~~~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
|+||.|.||+|++|+.+++. |.++++ +++.+..+. ...... ..+..+...+..+.+. ++++|+||.|.+.
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~G~~v~~~~g~~i~~~~~~~~~~----~~~~DvVf~a~g~ 75 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-LGQAAPSFGGTTGTLQDAFDLEA----LKALDIIVTCQGG 75 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCGGGTCCCBCEETTCHHH----HHTCSEEEECSCH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-CCCCccccCCCceEEEecCChHH----hcCCCEEEECCCc
Confidence 57999999999999999994 544554 555555542 111111 1111222233333333 3589999999873
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
. .+......+.+.|++ .+|=.||
T Consensus 76 ~-------------------~s~~~a~~~~~~G~k~vVID~ss 99 (367)
T 1t4b_A 76 D-------------------YTNEIYPKLRESGWQGYWIDAAS 99 (367)
T ss_dssp H-------------------HHHHHHHHHHHTTCCCEEEECSS
T ss_pred h-------------------hHHHHHHHHHHCCCCEEEEcCCh
Confidence 2 235566677788875 3443333
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00021 Score=64.16 Aligned_cols=111 Identities=15% Similarity=0.055 Sum_probs=74.7
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCC--Ccccc----ccc------ccceeEEecccchhhHhhhc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKK--NEHMT----EDM------FCHEFHLVDLRVMDNCLKVT 88 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~----~~~------~~i~~~~~dl~~~~~~~~~~ 88 (374)
|.++.+||.|+|+ |.+|..++..|+..|+ +|+++++++ ..... ... ....+...+ + .+.+
T Consensus 4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d----~~a~ 76 (315)
T 3tl2_A 4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--D----YADT 76 (315)
T ss_dssp CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--C----GGGG
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--C----HHHh
Confidence 4455689999996 9999999999999999 999999984 21110 000 001111111 1 2467
Q ss_pred cCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 89 KGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 89 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
+++|+||.+++..... .....+.+..|+...+.+.+.+.+.+.+ .++.+|.
T Consensus 77 ~~aDvVIiaag~p~kp---g~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN 128 (315)
T 3tl2_A 77 ADSDVVVITAGIARKP---GMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN 128 (315)
T ss_dssp TTCSEEEECCSCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCEEEEeCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 8999999999864322 2234566778999999999998887755 5565554
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0005 Score=62.76 Aligned_cols=94 Identities=13% Similarity=0.180 Sum_probs=57.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEe-CCCCcccccc----c--------ccceeEEecccchhhHhhhccC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYIIASD-WKKNEHMTED----M--------FCHEFHLVDLRVMDNCLKVTKG 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~-r~~~~~~~~~----~--------~~i~~~~~dl~~~~~~~~~~~~ 90 (374)
+++||.|.||+|++|+.+++.|.++. .+|..+. ...+...... . .+......|+ +.+. +++
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~----~~~ 77 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVST-NYED----HKD 77 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECS-SGGG----GTT
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeC-CHHH----hcC
Confidence 46899999999999999999998764 5787775 2211111000 0 0011111222 2222 368
Q ss_pred CCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecc
Q 017290 91 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~ 143 (374)
+|+||.|.+.. .+..++..+.+.|+ ++|-.|+.
T Consensus 78 vDvVf~atp~~-------------------~s~~~a~~~~~aG~-~VId~s~~ 110 (350)
T 2ep5_A 78 VDVVLSALPNE-------------------LAESIELELVKNGK-IVVSNASP 110 (350)
T ss_dssp CSEEEECCCHH-------------------HHHHHHHHHHHTTC-EEEECSST
T ss_pred CCEEEECCChH-------------------HHHHHHHHHHHCCC-EEEECCcc
Confidence 99999887631 24566777888887 57777664
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0005 Score=61.31 Aligned_cols=66 Identities=15% Similarity=0.137 Sum_probs=49.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
++|+|.|+| .|.+|..+++.|++.||+|++++|++.........++.. ..++.++++ +|+||.+..
T Consensus 14 ~~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-------~~~~~~~~~-aDvvi~~vp 79 (296)
T 3qha_A 14 EQLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATL-------ADSVADVAA-ADLIHITVL 79 (296)
T ss_dssp -CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEE-------CSSHHHHTT-SSEEEECCS
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEE-------cCCHHHHHh-CCEEEEECC
Confidence 357899998 899999999999999999999999987644333223221 234556677 999998875
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00011 Score=66.69 Aligned_cols=75 Identities=12% Similarity=0.170 Sum_probs=52.2
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhc-----cCCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT-----KGVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~-----~~~d~vi~~a 98 (374)
..+++|||+||+|-||..+++.+...|++|+++++++.+.......+.. ...|..+.+++.+.+ .++|++|+++
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 222 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFD-AAFNYKTVNSLEEALKKASPDGYDCYFDNV 222 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-EEEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCc-EEEecCCHHHHHHHHHHHhCCCCeEEEECC
Confidence 3568999999999999999999999999999999876543222222222 234655522222222 2689999999
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
+
T Consensus 223 g 223 (333)
T 1v3u_A 223 G 223 (333)
T ss_dssp C
T ss_pred C
Confidence 8
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=9.5e-05 Score=67.90 Aligned_cols=72 Identities=14% Similarity=0.128 Sum_probs=50.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccccc-ccceeEEecccchh---hHhhhcc-CCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDM-FCHEFHLVDLRVMD---NCLKVTK-GVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-~~i~~~~~dl~~~~---~~~~~~~-~~d~vi~~a~ 99 (374)
++|||+||+|-||..+++.+...|+ +|+++++++.+...... .+.. ...|..+.+ .+.+... ++|+||++++
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~d~vi~~~G 239 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD-AAINYKKDNVAEQLRESCPAGVDVYFDNVG 239 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS-EEEETTTSCHHHHHHHHCTTCEEEEEESCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-eEEecCchHHHHHHHHhcCCCCCEEEECCC
Confidence 8999999999999999999999999 99999987644222211 2322 224554433 2222222 6999999998
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00024 Score=67.21 Aligned_cols=74 Identities=18% Similarity=0.125 Sum_probs=50.1
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeE-------------EecccchhhHhhhccCCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFH-------------LVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~-------------~~dl~~~~~~~~~~~~~d 92 (374)
+|+|.|+| +|++|..++..|.+.||+|++++|++.+..........++ .+.+.-..++.++++++|
T Consensus 2 ~mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD 80 (450)
T 3gg2_A 2 SLDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD 80 (450)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence 37999998 6999999999999999999999998754222111000000 111222234555677899
Q ss_pred EEEEcccc
Q 017290 93 HVFNLAAD 100 (374)
Q Consensus 93 ~vi~~a~~ 100 (374)
+||-+.+.
T Consensus 81 vViiaVpt 88 (450)
T 3gg2_A 81 IIFIAVGT 88 (450)
T ss_dssp EEEECCCC
T ss_pred EEEEEcCC
Confidence 99999864
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00015 Score=65.18 Aligned_cols=74 Identities=14% Similarity=0.137 Sum_probs=48.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEE--------ecccchhhHhhhccCCCEEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL--------VDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~--------~dl~~~~~~~~~~~~~d~vi~ 96 (374)
+||+|+|+| .|.+|..++..|.+.|++|++++|++.........++.... .+..+.+++.+.++++|+||-
T Consensus 2 ~~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 2 NAMKIAIAG-AGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp --CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEE
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEE
Confidence 358999999 59999999999999999999999986543222211222211 111222333344558999999
Q ss_pred ccc
Q 017290 97 LAA 99 (374)
Q Consensus 97 ~a~ 99 (374)
+..
T Consensus 81 ~v~ 83 (316)
T 2ew2_A 81 LTK 83 (316)
T ss_dssp CSC
T ss_pred Eec
Confidence 875
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0016 Score=58.93 Aligned_cols=94 Identities=18% Similarity=0.130 Sum_probs=57.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCC---EEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGH---YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
.++|.|.||||++|..+++.|.++.| ++..+....+........+.....-++. ...++++|+||.|.+..
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~~~~~~~~~~~-----~~~~~~~Dvvf~a~~~~- 74 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAE-----TADPSGLDIALFSAGSA- 74 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEETTEEEEEEETT-----TSCCTTCSEEEECSCHH-
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeecCCceEEEeCC-----HHHhccCCEEEECCChH-
Confidence 36899999999999999999888754 4555553332211111111111111221 12346899999998732
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
.+......+.+.|+ ++|=.|+..
T Consensus 75 ------------------~s~~~a~~~~~~G~-~vID~Sa~~ 97 (344)
T 3tz6_A 75 ------------------MSKVQAPRFAAAGV-TVIDNSSAW 97 (344)
T ss_dssp ------------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred ------------------HHHHHHHHHHhCCC-EEEECCCcc
Confidence 13455666677887 688777753
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00075 Score=60.47 Aligned_cols=106 Identities=14% Similarity=0.087 Sum_probs=71.0
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccc----ccc------ccceeEEecccchhhHhhhccCCCEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMT----EDM------FCHEFHLVDLRVMDNCLKVTKGVDHV 94 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~------~~i~~~~~dl~~~~~~~~~~~~~d~v 94 (374)
|||.|+|+ |.+|+.++..|+..|. +|+++++++..... ... ....+...+ ..+.++++|+|
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~------~~~a~~~aDvV 73 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN------DYGPTEDSDVC 73 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES------SSGGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC------CHHHhCCCCEE
Confidence 78999996 9999999999999886 99999998754211 000 011222111 13467899999
Q ss_pred EEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 95 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
|.+++.... ......+.+..|+...+.+.+.+.+.+.+ .++.+|.
T Consensus 74 ii~ag~~~k---pG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 74 IITAGLPRS---PGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp EECCCC----------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred EECCCCCCC---CCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 999985432 12234566788999999999999988755 5555554
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00052 Score=63.05 Aligned_cols=95 Identities=12% Similarity=-0.001 Sum_probs=56.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEe-CCCCcccccc----c----------ccceeEEecccchhhHhhh
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEG-HYIIASD-WKKNEHMTED----M----------FCHEFHLVDLRVMDNCLKV 87 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~-r~~~~~~~~~----~----------~~i~~~~~dl~~~~~~~~~ 87 (374)
|+++||.|.||||++|..+++.|.++. .++..+. ...+...... . ....+. ++... ..
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~--~~~~~----~~ 90 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQ--ECKPE----GN 90 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCE--ESSSC----TT
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEE--eCchh----hh
Confidence 356789999999999999999888765 4775553 2211111100 0 011111 11111 03
Q ss_pred ccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 88 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
++++|+||.|.+.. .+..+...+.+.|+ ++|=.|+..
T Consensus 91 ~~~~Dvvf~alp~~-------------------~s~~~~~~~~~~G~-~VIDlSa~f 127 (381)
T 3hsk_A 91 FLECDVVFSGLDAD-------------------VAGDIEKSFVEAGL-AVVSNAKNY 127 (381)
T ss_dssp GGGCSEEEECCCHH-------------------HHHHHHHHHHHTTC-EEEECCSTT
T ss_pred cccCCEEEECCChh-------------------HHHHHHHHHHhCCC-EEEEcCCcc
Confidence 46899999998731 13455666677887 678777753
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00017 Score=64.54 Aligned_cols=46 Identities=17% Similarity=0.245 Sum_probs=34.9
Q ss_pred hccCCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 16 LEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 16 ~~~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
|.+++.|...+++|.|+|+ |.+|..++..|++.|++|++++|++..
T Consensus 5 ~~~~~~~~~~~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~ 50 (302)
T 1f0y_A 5 TASASAKKIIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDI 50 (302)
T ss_dssp -------CCCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred ccccccccccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 4455666666789999995 999999999999999999999998653
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00034 Score=63.43 Aligned_cols=165 Identities=14% Similarity=0.085 Sum_probs=100.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-------EEEEEeCCCCccc------ccc---cc-cceeEEecccchhhHhhh
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-------YIIASDWKKNEHM------TED---MF-CHEFHLVDLRVMDNCLKV 87 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~------~~~---~~-~i~~~~~dl~~~~~~~~~ 87 (374)
+..||.|+||+|.||++++-.|..... ++..++..+.... +.. .. ....+.+ .+..++
T Consensus 23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~-----~~~~~a 97 (345)
T 4h7p_A 23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT-----ADPRVA 97 (345)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE-----SCHHHH
T ss_pred CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc-----CChHHH
Confidence 346999999999999999988876532 6888887643110 000 00 0111111 224567
Q ss_pred ccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC-CC-eEEEeeccc---ccCCCcccccccCCCCCC
Q 017290 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VK-RFFYASSAC---IYPEFKQLETNVSLKESD 162 (374)
Q Consensus 88 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~-~~i~~Ss~~---vy~~~~~~~~~~~~~e~~ 162 (374)
++++|+||-+||.... ......+.+..|....+.+.+.+.+.. .. +++.+|... +|- ..+..
T Consensus 98 ~~~advVvi~aG~prk---pGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~i----------~~~~~ 164 (345)
T 4h7p_A 98 FDGVAIAIMCGAFPRK---AGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALI----------LLKSA 164 (345)
T ss_dssp TTTCSEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHH----------HHHHT
T ss_pred hCCCCEEEECCCCCCC---CCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHHH----------HHHHc
Confidence 8999999999996532 223456778899999999999988754 22 455565421 110 00000
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCC
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFG 207 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~ 207 (374)
...+.+....+.+.+..-++-...++..+++...++-..|+|.++
T Consensus 165 ~g~~~~r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG 209 (345)
T 4h7p_A 165 QGKLNPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHS 209 (345)
T ss_dssp TTCSCGGGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSS
T ss_pred cCCCCcceeeeccchhHHHHHHHHHHHHCcChhheecceeecCCC
Confidence 001234445556666655665666666787777676666778764
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00068 Score=61.90 Aligned_cols=93 Identities=16% Similarity=0.062 Sum_probs=57.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCccccccc--------------ccceeEEecccchhhHhhhcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDM--------------FCHEFHLVDLRVMDNCLKVTK 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~--------------~~i~~~~~dl~~~~~~~~~~~ 89 (374)
++++|.|+||||++|..+++.|.++. .++..+....+....... ....+... +. ..+.
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~---~~----~~~~ 78 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT---DP----KLMD 78 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC---CG----GGCT
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC---CH----HHhc
Confidence 45789999999999999999887764 477666543321111100 01111111 11 1246
Q ss_pred CCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 90 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
++|+||.|.+... +..+...+.+.|+ ++|=+|+..
T Consensus 79 ~vDvvf~a~p~~~-------------------s~~~a~~~~~~G~-~vIDlSa~~ 113 (359)
T 4dpl_A 79 DVDIIFSPLPQGA-------------------AGPVEEQFAKEGF-PVISNSPDH 113 (359)
T ss_dssp TCCEEEECCCTTT-------------------HHHHHHHHHHTTC-EEEECSSTT
T ss_pred CCCEEEECCChHH-------------------HHHHHHHHHHCCC-EEEEcCCCc
Confidence 8999999987421 2445566677887 788888763
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00068 Score=61.90 Aligned_cols=93 Identities=16% Similarity=0.062 Sum_probs=57.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCccccccc--------------ccceeEEecccchhhHhhhcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDM--------------FCHEFHLVDLRVMDNCLKVTK 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~--------------~~i~~~~~dl~~~~~~~~~~~ 89 (374)
++++|.|+||||++|..+++.|.++. .++..+....+....... ....+... +. ..+.
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~---~~----~~~~ 78 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT---DP----KLMD 78 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC---CG----GGCT
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC---CH----HHhc
Confidence 45789999999999999999887764 477666543321111100 01111111 11 1246
Q ss_pred CCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 90 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
++|+||.|.+... +..+...+.+.|+ ++|=+|+..
T Consensus 79 ~vDvvf~a~p~~~-------------------s~~~a~~~~~~G~-~vIDlSa~~ 113 (359)
T 4dpk_A 79 DVDIIFSPLPQGA-------------------AGPVEEQFAKEGF-PVISNSPDH 113 (359)
T ss_dssp TCCEEEECCCTTT-------------------HHHHHHHHHHTTC-EEEECSSTT
T ss_pred CCCEEEECCChHH-------------------HHHHHHHHHHCCC-EEEEcCCCc
Confidence 8999999987421 2445566677887 788888763
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00011 Score=66.49 Aligned_cols=75 Identities=15% Similarity=0.074 Sum_probs=52.4
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhh---Hhhhc--cCCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDN---CLKVT--KGVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~---~~~~~--~~~d~vi~~a 98 (374)
..+++|||+||+|.||..+++.+...|++|+++++++.+.......+... ..|..+.+. +.+.. +++|+||+++
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi~~~ 217 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQ-VINYREEDLVERLKEITGGKKVRVVYDSV 217 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EEECCCccHHHHHHHHhCCCCceEEEECC
Confidence 35689999999999999999999999999999998765432222222222 235544333 33332 2689999999
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
+
T Consensus 218 g 218 (327)
T 1qor_A 218 G 218 (327)
T ss_dssp C
T ss_pred c
Confidence 8
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00046 Score=59.39 Aligned_cols=62 Identities=18% Similarity=0.295 Sum_probs=41.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEE-EeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIA-SDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
+||||.|+|+ |.+|+.+++.+.+.++++.+ +++++... .++.+ .+++.+++ ++|+||+++.+
T Consensus 2 ~MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~~-----~gv~v-------~~dl~~l~-~~DVvIDft~p 64 (243)
T 3qy9_A 2 ASMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTPKAT-----TPYQQ-------YQHIADVK-GADVAIDFSNP 64 (243)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCC-------CCSCB-------CSCTTTCT-TCSEEEECSCH
T ss_pred CceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCcccc-----CCCce-------eCCHHHHh-CCCEEEEeCCh
Confidence 4689999999 99999999999998777665 56654421 11111 12233344 78888888764
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00027 Score=62.67 Aligned_cols=37 Identities=24% Similarity=0.322 Sum_probs=33.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
.+++|.|+| .|.+|+.++..|++.|++|++++|++..
T Consensus 3 ~~~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~ 39 (283)
T 4e12_A 3 GITNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINTDA 39 (283)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence 468999998 6999999999999999999999998654
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0004 Score=65.51 Aligned_cols=73 Identities=21% Similarity=0.172 Sum_probs=49.0
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeE-------------EecccchhhHhhhccCCCE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFH-------------LVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~-------------~~dl~~~~~~~~~~~~~d~ 93 (374)
|+|.|+| +|++|..++..|.+.||+|++++|++.+..........+. .+.+....++.++++++|+
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDv 79 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV 79 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCE
Confidence 6899998 8999999999999999999999998654322211111110 0112222334456678999
Q ss_pred EEEcccc
Q 017290 94 VFNLAAD 100 (374)
Q Consensus 94 vi~~a~~ 100 (374)
||.+...
T Consensus 80 viiaVpt 86 (436)
T 1mv8_A 80 SFICVGT 86 (436)
T ss_dssp EEECCCC
T ss_pred EEEEcCC
Confidence 9999863
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00021 Score=65.47 Aligned_cols=74 Identities=15% Similarity=0.128 Sum_probs=52.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhh---Hhhhcc--CCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDN---CLKVTK--GVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~---~~~~~~--~~d~vi~~a~ 99 (374)
..++|||+||+|-+|..+++.+...|++|+++++++.+.......+... ..|..+.+. +.+... ++|+||++++
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G 248 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHE-VFNHREVNYIDKIKKYVGEKGIDIIIEMLA 248 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-EEETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCE-EEeCCCchHHHHHHHHcCCCCcEEEEECCC
Confidence 5689999999999999999999999999999998865433222223222 235544332 333332 6999999997
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00068 Score=60.50 Aligned_cols=55 Identities=20% Similarity=0.199 Sum_probs=45.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
++++|.|+||.|.+|..++..|.+.|++|++++|++.. ...++++++|+||.+..
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--------------------~~~~~~~~aDvVilavp 74 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--------------------VAESILANADVVIVSVP 74 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--------------------GHHHHHTTCSEEEECSC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--------------------CHHHHhcCCCEEEEeCC
Confidence 45789999999999999999999999999999987531 23445678899888875
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00037 Score=65.37 Aligned_cols=70 Identities=10% Similarity=0.010 Sum_probs=54.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
+.+++|+|+| +|.+|+.+++.+.+.|++|++++..+....... .-..+..|+.|.+.+.++.+++|+|+.
T Consensus 33 ~~~~~IlIlG-~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~--ad~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 33 LPGAWLGMVG-GGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAV--ADRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHH--SSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCCcCchhhh--CCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 3567999998 689999999999999999999986654322111 124566888999999998889999884
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00015 Score=65.92 Aligned_cols=75 Identities=16% Similarity=0.188 Sum_probs=52.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchh---hHhhhc--cCCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD---NCLKVT--KGVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~---~~~~~~--~~~d~vi~~a 98 (374)
..+++|||+||+|.||..+++.+...|++|++++|++.+.......+... ..|..+.+ .+.+.. +++|+||+++
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~i~~~~~~~~~d~vi~~~ 222 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHH-TINYSTQDFAEVVREITGGKGVDVVYDSI 222 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHHTTCCEEEEEECS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE-EEECCCHHHHHHHHHHhCCCCCeEEEECC
Confidence 35689999999999999999999999999999999864432222222222 23554433 233333 2699999999
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
+
T Consensus 223 g 223 (333)
T 1wly_A 223 G 223 (333)
T ss_dssp C
T ss_pred c
Confidence 8
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00086 Score=58.10 Aligned_cols=100 Identities=12% Similarity=0.067 Sum_probs=65.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc-----------------------c----cccceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE-----------------------D----MFCHEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-----------------------~----~~~i~~~~~ 76 (374)
..++|+|+| .|-+|+++++.|...|. +|+++++..-..... . ...++.+..
T Consensus 30 ~~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 108 (249)
T 1jw9_B 30 KDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA 108 (249)
T ss_dssp HHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred hCCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence 457899999 58999999999999996 899999875110000 0 012233333
Q ss_pred cccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccc
Q 017290 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145 (374)
Q Consensus 77 dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~v 145 (374)
+++ .+.+.++++++|+||.+.. |...-..+.++|++.++ .+|+.+....
T Consensus 109 ~~~-~~~~~~~~~~~DvVi~~~d------------------~~~~~~~l~~~~~~~~~-p~i~~~~~g~ 157 (249)
T 1jw9_B 109 LLD-DAELAALIAEHDLVLDCTD------------------NVAVRNQLNAGCFAAKV-PLVSGAAIRM 157 (249)
T ss_dssp CCC-HHHHHHHHHTSSEEEECCS------------------SHHHHHHHHHHHHHHTC-CEEEEEEEBT
T ss_pred cCC-HhHHHHHHhCCCEEEEeCC------------------CHHHHHHHHHHHHHcCC-CEEEeeeccc
Confidence 443 3456667789999999875 33333456678888886 4666555433
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00062 Score=61.39 Aligned_cols=109 Identities=12% Similarity=0.041 Sum_probs=74.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccc----cc----cc-cceeEEecccchhhHhhhccCCC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMT----ED----MF-CHEFHLVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~----~~-~i~~~~~dl~~~~~~~~~~~~~d 92 (374)
...+||.|+|+ |.+|..++..|+..|. +|++++++...... .. .. ...++.. .| +. .++++|
T Consensus 17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d---~~-~~~~aD 89 (331)
T 4aj2_A 17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KD---YS-VTANSK 89 (331)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SS---GG-GGTTEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CC---HH-HhCCCC
Confidence 45689999997 9999999999999987 89999987532111 00 00 0111111 12 22 478999
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
+||.+||.... ......+.+..|+...+.+.+.+.++..+ .++.+|.
T Consensus 90 iVvi~aG~~~k---pG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 90 LVIITAGARQQ---EGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp EEEECCSCCCC---TTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred EEEEccCCCCC---CCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 99999986432 23345678888999999999999887654 5665554
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00065 Score=62.15 Aligned_cols=78 Identities=18% Similarity=0.208 Sum_probs=47.8
Q ss_pred hccCCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEE
Q 017290 16 LEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 16 ~~~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi 95 (374)
+...+.|+ .+|+|.|+| .|.+|..+++.|++.||+|++++|++.........++.. ..+.+++.+..+.+|+||
T Consensus 13 ~~~~~~Mm-~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~----~~s~~e~~~~a~~~DvVi 86 (358)
T 4e21_A 13 LGTENLYF-QSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAG----ARSIEEFCAKLVKPRVVW 86 (358)
T ss_dssp ----------CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBC----CSSHHHHHHHSCSSCEEE
T ss_pred cccchhhh-cCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEE----eCCHHHHHhcCCCCCEEE
Confidence 34555553 568999998 899999999999999999999999876433322222221 123333333333459999
Q ss_pred Eccc
Q 017290 96 NLAA 99 (374)
Q Consensus 96 ~~a~ 99 (374)
.+..
T Consensus 87 ~~vp 90 (358)
T 4e21_A 87 LMVP 90 (358)
T ss_dssp ECSC
T ss_pred EeCC
Confidence 8875
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00017 Score=65.77 Aligned_cols=75 Identities=17% Similarity=0.223 Sum_probs=51.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-cccceeEEecccchhh----Hhhhc-cCCCEEEEc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-MFCHEFHLVDLRVMDN----CLKVT-KGVDHVFNL 97 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~i~~~~~dl~~~~~----~~~~~-~~~d~vi~~ 97 (374)
..+++|||+||+|-+|..+++.+...|++|+++++++.+..... ..+... ..|..+.++ +.++. .++|+||++
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 232 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDD-AFNYKEESDLTAALKRCFPNGIDIYFEN 232 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSE-EEETTSCSCSHHHHHHHCTTCEEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCce-EEecCCHHHHHHHHHHHhCCCCcEEEEC
Confidence 35689999999999999999999999999999998865432222 223322 235544322 22222 369999999
Q ss_pred cc
Q 017290 98 AA 99 (374)
Q Consensus 98 a~ 99 (374)
++
T Consensus 233 ~g 234 (345)
T 2j3h_A 233 VG 234 (345)
T ss_dssp SC
T ss_pred CC
Confidence 97
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0002 Score=65.81 Aligned_cols=98 Identities=14% Similarity=0.096 Sum_probs=63.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchh---hHhhhc-cCCCEEEEcccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD---NCLKVT-KGVDHVFNLAAD 100 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~---~~~~~~-~~~d~vi~~a~~ 100 (374)
.+.+|||+||+|.+|..+++.+...|++|+++++++.+.......+...+ .|..+.+ .+.+.. +++|+||++++.
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 241 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRP-INYKTEPVGTVLKQEYPEGVDVVYESVGG 241 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHCTTCEEEEEECSCT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEE-EecCChhHHHHHHHhcCCCCCEEEECCCH
Confidence 56899999999999999999999999999999987654332222233222 2333322 222222 368999999872
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
......+++++..| +++.+++..
T Consensus 242 -------------------~~~~~~~~~l~~~G--~iv~~g~~~ 264 (362)
T 2c0c_A 242 -------------------AMFDLAVDALATKG--RLIVIGFIS 264 (362)
T ss_dssp -------------------HHHHHHHHHEEEEE--EEEECCCGG
T ss_pred -------------------HHHHHHHHHHhcCC--EEEEEeCCC
Confidence 11233445555554 788887653
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00076 Score=60.85 Aligned_cols=68 Identities=15% Similarity=0.176 Sum_probs=50.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
.++|+|.|+| .|.+|..+++.|++.|++|++++|++.+.......++.. ...+.++++++|+||-+..
T Consensus 29 ~~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~-------~~~~~e~~~~aDvVi~~vp 96 (320)
T 4dll_A 29 PYARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATI-------HEQARAAARDADIVVSMLE 96 (320)
T ss_dssp CCCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEE-------ESSHHHHHTTCSEEEECCS
T ss_pred cCCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEe-------eCCHHHHHhcCCEEEEECC
Confidence 3568999998 799999999999999999999999876533322223221 2345566788999998875
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00099 Score=60.04 Aligned_cols=116 Identities=15% Similarity=0.106 Sum_probs=70.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccc---cccce--eEEecccchhhHhhhccCCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTED---MFCHE--FHLVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~---~~~i~--~~~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
.+|||.|+|+ |.+|..++..|+..|+ +|.++++++....... ..... .....+....++ ++++++|+||.++
T Consensus 3 ~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 3 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence 3579999997 9999999999999998 9999998865322100 00000 001111111223 5688999999999
Q ss_pred cccCCcccc--cCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 99 ADMGGMGFI--QSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 99 ~~~~~~~~~--~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
+.....+.. +.........|+...+.+.+.+.+...+ .+|.+|.
T Consensus 81 g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 127 (322)
T 1t2d_A 81 GFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTN 127 (322)
T ss_dssp SCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred CCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 754321111 0002344556777788888877776544 4454443
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0028 Score=57.93 Aligned_cols=93 Identities=16% Similarity=0.124 Sum_probs=53.3
Q ss_pred CeEEEEcCcchhHHHHHH-HHHhCCC---EEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccC
Q 017290 27 LRISVTGAGGFIASHIAR-RLKSEGH---YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~-~L~~~g~---~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
|+|.|+||||++|+.+++ .|.++.+ ++..++.+..........+.....-+..+.+ .++++|+||.|.+..
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~~~~~~~~~~~~----~~~~~Dvvf~a~~~~- 75 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFDIE----SLKQLDAVITCQGGS- 75 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCCSSSCCCBCEETTCHH----HHTTCSEEEECSCHH-
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCcCHHHhCCCceEEEecCChh----HhccCCEEEECCChH-
Confidence 689999999999999999 6666653 6665543322111000111111111222222 247899999998732
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
.+......+.+.|++ ++|=.|+
T Consensus 76 ------------------~s~~~~~~~~~~G~k~~VID~ss 98 (370)
T 3pzr_A 76 ------------------YTEKVYPALRQAGWKGYWIDAAS 98 (370)
T ss_dssp ------------------HHHHHHHHHHHTTCCCEEEECSS
T ss_pred ------------------HHHHHHHHHHHCCCCEEEEeCCc
Confidence 134555666677874 5655554
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00041 Score=62.74 Aligned_cols=92 Identities=21% Similarity=0.134 Sum_probs=53.7
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEE---EEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYII---ASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGG 103 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~ 103 (374)
|||.|.||+|++|+.+++.|.+++|++. .+.............+..+...+. +.+ . + ++|+||.|.+..
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~~g~~i~v~~~-~~~---~-~-~~DvV~~a~g~~-- 72 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAFRGEEIPVEPL-PEG---P-L-PVDLVLASAGGG-- 72 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEETTEEEEEEEC-CSS---C-C-CCSEEEECSHHH--
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEEcCceEEEEeC-Chh---h-c-CCCEEEECCCcc--
Confidence 5899999999999999999998776543 222111100000000111111122 222 2 3 899999998742
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccc
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~ 144 (374)
.+......+.+.|+ ++|-.|+..
T Consensus 73 -----------------~s~~~a~~~~~~G~-~vId~s~~~ 95 (331)
T 2yv3_A 73 -----------------ISRAKALVWAEGGA-LVVDNSSAW 95 (331)
T ss_dssp -----------------HHHHHHHHHHHTTC-EEEECSSSS
T ss_pred -----------------chHHHHHHHHHCCC-EEEECCCcc
Confidence 12445556667787 788888763
|
| >2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0029 Score=49.71 Aligned_cols=84 Identities=15% Similarity=0.214 Sum_probs=57.3
Q ss_pred CCeEEEEcCc---chhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccC
Q 017290 26 KLRISVTGAG---GFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 26 ~~~ilItGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
+++|.|+|++ |.+|..+++.|++.||+|+.++.+... ..+ +.-...+.++.+.+|.++-+...
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~-----i~G-------~~~y~sl~~l~~~vDlvvi~vp~-- 87 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEE-----VLG-------RKCYPSVLDIPDKIEVVDLFVKP-- 87 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE-----ETT-------EECBSSGGGCSSCCSEEEECSCH--
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCe-----ECC-------eeccCCHHHcCCCCCEEEEEeCH--
Confidence 5789999998 899999999999999987666533211 011 12222344445578988887642
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEe
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYA 140 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~ 140 (374)
..+..+++.|.+.|++.+++.
T Consensus 88 -----------------~~~~~vv~~~~~~gi~~i~~~ 108 (144)
T 2d59_A 88 -----------------KLTMEYVEQAIKKGAKVVWFQ 108 (144)
T ss_dssp -----------------HHHHHHHHHHHHHTCSEEEEC
T ss_pred -----------------HHHHHHHHHHHHcCCCEEEEC
Confidence 334667788888898766544
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00027 Score=62.19 Aligned_cols=73 Identities=19% Similarity=0.180 Sum_probs=49.5
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc-ccc--eeEEecccchhhHhhhccCCCEEEEccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM-FCH--EFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~i--~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
....++++|+|+ |-+|+.++..|++.|++|++++|+..+...... .+. .+...| .+++.+ .++|+||++++
T Consensus 116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~---~~~~~~--~~~DivVn~t~ 189 (271)
T 1nyt_A 116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALS---MDELEG--HEFDLIINATS 189 (271)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECC---SGGGTT--CCCSEEEECCS
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEec---HHHhcc--CCCCEEEECCC
Confidence 346789999997 779999999999999999999998654221110 000 111222 233322 58999999998
Q ss_pred cc
Q 017290 100 DM 101 (374)
Q Consensus 100 ~~ 101 (374)
..
T Consensus 190 ~~ 191 (271)
T 1nyt_A 190 SG 191 (271)
T ss_dssp CG
T ss_pred CC
Confidence 53
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00038 Score=62.57 Aligned_cols=69 Identities=10% Similarity=0.090 Sum_probs=50.6
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
...||+|.|+| .|.+|..+++.|++.||+|++.+|++.........++.. ...+.++++++|+||-+..
T Consensus 18 ~~~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~-------~~~~~~~~~~aDvvi~~vp 86 (310)
T 3doj_A 18 GSHMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASV-------CESPAEVIKKCKYTIAMLS 86 (310)
T ss_dssp CCCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred cccCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeE-------cCCHHHHHHhCCEEEEEcC
Confidence 34678999998 899999999999999999999999876543332222221 2234555667898888875
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00096 Score=62.23 Aligned_cols=72 Identities=13% Similarity=0.091 Sum_probs=55.4
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEE
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
++.+++|+|+| +|.+|+.+++.+.+.|++|++++ .+.............+.+++.|.+.+.++.+.+|+|+.
T Consensus 21 mm~~~~I~ilG-gG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 21 MWNSRKVGVLG-GGQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp CCSCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 34568999999 58999999999999999999999 54332222111124567899999999999999998764
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00023 Score=65.29 Aligned_cols=75 Identities=9% Similarity=0.088 Sum_probs=52.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchh---hHhhhc--cCCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD---NCLKVT--KGVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~---~~~~~~--~~~d~vi~~a 98 (374)
..+.+|||+||+|-||..+++.+...|++|+++++++.+.......+.. ...|..+.+ .+.+.. +++|++|+++
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 239 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAA-AGFNYKKEDFSEATLKFTKGAGVNLILDCI 239 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCc-EEEecCChHHHHHHHHHhcCCCceEEEECC
Confidence 3568999999999999999999999999999999886543322222222 223544433 233333 2699999999
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
+
T Consensus 240 G 240 (354)
T 2j8z_A 240 G 240 (354)
T ss_dssp C
T ss_pred C
Confidence 8
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0013 Score=60.85 Aligned_cols=71 Identities=15% Similarity=0.144 Sum_probs=55.9
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEE
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
...+++|+|+| .|.+|+.+++.+.+.|++|++++..+....... .-..+..|+.|.+.+.++.+++|+|..
T Consensus 9 ~~~~~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~--ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 9 LKFGATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV--AHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG--SSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCChhhhh--CCEEEECCCCCHHHHHHHHHhCCccee
Confidence 34678999999 689999999999999999999987765322211 125677899999999998888998744
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00024 Score=64.53 Aligned_cols=75 Identities=24% Similarity=0.287 Sum_probs=52.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchh---hHhhhc--cCCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD---NCLKVT--KGVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~---~~~~~~--~~~d~vi~~a 98 (374)
..+.+|||+||+|-+|..+++.+...|.+|+++++++.+.......+... ..|..+.+ .+.+.. +++|+||+++
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~~~~~~~~~~~~~~~~~~~g~D~vid~~ 225 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEY-LINASKEDILRQVLKFTNGKGVDASFDSV 225 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEECC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcE-EEeCCCchHHHHHHHHhCCCCceEEEECC
Confidence 35689999999999999999999999999999998765433222223222 23333333 333333 2699999999
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
+
T Consensus 226 g 226 (334)
T 3qwb_A 226 G 226 (334)
T ss_dssp G
T ss_pred C
Confidence 8
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.17 E-value=6e-05 Score=59.54 Aligned_cols=69 Identities=14% Similarity=0.189 Sum_probs=49.9
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-cccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
.++|+|+|+ |.+|+.+++.|.+.|++|++++|++.+..... ..+... ...+++.++++++|+||.+.+.
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~-----~~~~~~~~~~~~~Divi~at~~ 90 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEY-----VLINDIDSLIKNNDVIITATSS 90 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEE-----EECSCHHHHHHTCSEEEECSCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCce-----EeecCHHHHhcCCCEEEEeCCC
Confidence 689999995 99999999999999999999999865432211 112121 1233455667789999999874
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0011 Score=59.76 Aligned_cols=113 Identities=17% Similarity=0.131 Sum_probs=69.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccc-c--cccee--EEecccchhhHhhhccCCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTED-M--FCHEF--HLVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~--~~i~~--~~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
++|+|.|+|+ |.+|..++..|+..|+ +|+++++++....... . ..... ....+....++ +.++++|+||-++
T Consensus 3 ~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~av 80 (317)
T 2ewd_A 3 ERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITA 80 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence 3579999997 9999999999999998 9999999865322110 0 00000 00011111223 4678999999999
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
+.....+. ...+....|....+.+++.+.+.... .+|.+|.
T Consensus 81 g~p~~~g~---~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN 122 (317)
T 2ewd_A 81 SIPGRPKD---DRSELLFGNARILDSVAEGVKKYCPNAFVICITN 122 (317)
T ss_dssp CCSSCCSS---CGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred CCCCCCCC---cHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 85432211 22334455777777787777665433 4554554
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0012 Score=58.89 Aligned_cols=37 Identities=19% Similarity=0.255 Sum_probs=33.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
.|+||.++| .|.+|..+++.|++.||+|++.+|++++
T Consensus 2 ~M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~~~ 38 (300)
T 3obb_A 2 HMKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSA 38 (300)
T ss_dssp -CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred CcCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCHHH
Confidence 468999999 8999999999999999999999998764
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00054 Score=61.34 Aligned_cols=78 Identities=15% Similarity=0.042 Sum_probs=56.8
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCC---cccccc-----cccceeEEecccchhhHhhhccCCC
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKN---EHMTED-----MFCHEFHLVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~---~~~~~~-----~~~i~~~~~dl~~~~~~~~~~~~~d 92 (374)
.....+++||+|+ |-+|+.++..|.+.|. +|++++|+++ +..... ..+..+...++.+.+.+.+.+.++|
T Consensus 150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aD 228 (315)
T 3tnl_A 150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESV 228 (315)
T ss_dssp CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCC
Confidence 4457799999996 8999999999999998 8999999843 211110 0122344456666666777788999
Q ss_pred EEEEcccc
Q 017290 93 HVFNLAAD 100 (374)
Q Consensus 93 ~vi~~a~~ 100 (374)
+||++...
T Consensus 229 iIINaTp~ 236 (315)
T 3tnl_A 229 IFTNATGV 236 (315)
T ss_dssp EEEECSST
T ss_pred EEEECccC
Confidence 99998764
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00059 Score=61.41 Aligned_cols=106 Identities=13% Similarity=0.072 Sum_probs=70.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCcccc----ccc------ccceeEEecccchhhHhhhccCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMT----EDM------FCHEFHLVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~------~~i~~~~~dl~~~~~~~~~~~~~d 92 (374)
++|||.|+|+ |.+|..++..|+..+ .+|..+++++.+... ... ..+++. .| ..++++++|
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~------~~~a~~~aD 76 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG------EYSDCHDAD 76 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC------CGGGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC------CHHHhCCCC
Confidence 4579999998 999999999999887 489999987532111 000 111221 11 145688999
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEee
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYAS 141 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~S 141 (374)
+||.+++..... ..........|+.....+.+.+.+.... .+|.+|
T Consensus 77 vVvi~ag~~~~~---g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 123 (317)
T 3d0o_A 77 LVVICAGAAQKP---GETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT 123 (317)
T ss_dssp EEEECCCCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEECCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 999999854321 1223345677888888888888888755 444433
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0036 Score=57.32 Aligned_cols=95 Identities=14% Similarity=0.127 Sum_probs=54.7
Q ss_pred CCCeEEEEcCcchhHHHHHH-HHHhCC---CEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 25 EKLRISVTGAGGFIASHIAR-RLKSEG---HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~-~L~~~g---~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
..++|.|+||||++|+.+++ .|.++. .++..++.+..-.......+.....-+..+.+ .++++|+||.|.+.
T Consensus 3 ~~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~~~~v~~~~~~~----~~~~vDvvf~a~~~ 78 (377)
T 3uw3_A 3 GSMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPSFAKNETTLKDATSID----DLKKCDVIITCQGG 78 (377)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSBCCTTCCSCCBCEETTCHH----HHHTCSEEEECSCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCCHHHcCCCceEEEeCCChh----HhcCCCEEEECCCh
Confidence 35899999999999999999 666665 36665544321111000111111111222222 24689999999873
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
. .+..+...+.+.|++ ++|=.|+
T Consensus 79 ~-------------------~s~~~~~~~~~~G~k~~VID~ss 102 (377)
T 3uw3_A 79 D-------------------YTNDVFPKLRAAGWNGYWIDAAS 102 (377)
T ss_dssp H-------------------HHHHHHHHHHHTTCCSEEEECSS
T ss_pred H-------------------HHHHHHHHHHHCCCCEEEEeCCc
Confidence 2 134556666778874 5665554
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00078 Score=59.73 Aligned_cols=66 Identities=15% Similarity=0.173 Sum_probs=49.0
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
+|+|.|+| .|.+|..+++.|.+.||+|++.+|++.+.......++. ..+++.++++++|+||-+..
T Consensus 1 s~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------~~~~~~~~~~~aDvvi~~vp 66 (287)
T 3pef_A 1 SQKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAE-------RAATPCEVVESCPVTFAMLA 66 (287)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCE-------ECSSHHHHHHHCSEEEECCS
T ss_pred CCEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCe-------ecCCHHHHHhcCCEEEEEcC
Confidence 37899998 79999999999999999999999987654333222222 12344556677899998875
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0012 Score=59.73 Aligned_cols=113 Identities=18% Similarity=0.094 Sum_probs=70.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccc---ccccee--EEecccchhhHhhhccCCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTED---MFCHEF--HLVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~---~~~i~~--~~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
++|||.|+|| |.+|..++..|...|+ +|+++++++....... ...... ....+....++ ++++++|+||-++
T Consensus 13 ~~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~av 90 (328)
T 2hjr_A 13 MRKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITA 90 (328)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcC
Confidence 3479999997 9999999999999999 9999999875422100 000000 01111111223 5678999999999
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
+.....+. ...+....|+...+.+.+.+.+...+ .+|.+|.
T Consensus 91 g~p~k~g~---tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 132 (328)
T 2hjr_A 91 GVPRKPNM---TRSDLLTVNAKIVGSVAENVGKYCPNAFVICITN 132 (328)
T ss_dssp SCCCCTTC---CSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCCCC---chhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 75332211 12234556778888888887776544 4444444
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00036 Score=63.48 Aligned_cols=73 Identities=15% Similarity=0.118 Sum_probs=50.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchh---hHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD---NCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~---~~~~~~~~~d~vi~~a~ 99 (374)
.+++|||+|+ |-+|..+++.+...|.+|+++++++.+.......+... ..|..+.+ .+.++..++|+||++++
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-~~d~~~~~~~~~~~~~~~~~d~vid~~g 239 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADL-VVNPLKEDAAKFMKEKVGGVHAAVVTAV 239 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSE-EECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCE-EecCCCccHHHHHHHHhCCCCEEEECCC
Confidence 5689999999 66999999999999999999998865433222233332 23544332 23232358999999997
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00033 Score=63.66 Aligned_cols=75 Identities=15% Similarity=0.199 Sum_probs=52.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-ccccceeEEecccchhhHh---hhc-cCCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-DMFCHEFHLVDLRVMDNCL---KVT-KGVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~i~~~~~dl~~~~~~~---~~~-~~~d~vi~~a 98 (374)
..+++|||+||+|-||..+++.+...|.+|+++++++.+.... ...+... ..|..+.+... +.. +++|+||+++
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 226 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDG-AIDYKNEDLAAGLKRECPKGIDVFFDNV 226 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSE-EEETTTSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCE-EEECCCHHHHHHHHHhcCCCceEEEECC
Confidence 3568999999999999999999999999999999887554333 2233322 23444433222 222 3699999999
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
+
T Consensus 227 g 227 (336)
T 4b7c_A 227 G 227 (336)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00084 Score=61.30 Aligned_cols=73 Identities=11% Similarity=0.073 Sum_probs=51.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchh---hHhhhc--cCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD---NCLKVT--KGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~---~~~~~~--~~~d~vi~~a~ 99 (374)
.++|+|+||+|-+|..+++.+...|.+|+++++++.+.......+... ..|..+.+ .+.++. +++|+||++++
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~~~~~~~v~~~~~~~g~D~vid~~g 242 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAH-VLNEKAPDFEATLREVMKAEQPRIFLDAVT 242 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSE-EEETTSTTHHHHHHHHHHHHCCCEEEESSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE-EEECCcHHHHHHHHHHhcCCCCcEEEECCC
Confidence 378999999999999999999889999999998876543333333322 23333332 233332 37999999998
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0006 Score=61.52 Aligned_cols=110 Identities=16% Similarity=0.082 Sum_probs=71.0
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccc----ccc-----ccceeEEecccchhhHhhhccC
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMT----EDM-----FCHEFHLVDLRVMDNCLKVTKG 90 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~-----~~i~~~~~dl~~~~~~~~~~~~ 90 (374)
...++|||.|+|+ |.+|..++-.|+..+. +|..++++..+... ... ..+.+. .| -.+++++
T Consensus 5 ~~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~------~~~a~~~ 76 (326)
T 2zqz_A 5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA------EYSDAKD 76 (326)
T ss_dssp -CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC------CGGGGGG
T ss_pred ccCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC------CHHHhCC
Confidence 3445689999998 9999999999988875 89999986532211 000 111222 11 1445789
Q ss_pred CCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 91 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
+|+||..++..... ..........|+...+.+.+.+.+...+ .+|.+|.
T Consensus 77 aDvVii~ag~~~k~---g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 126 (326)
T 2zqz_A 77 ADLVVITAGAPQKP---GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp CSEEEECCCCC--------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred CCEEEEcCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 99999999854321 1223345667888888898888887644 5555544
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00034 Score=64.25 Aligned_cols=75 Identities=8% Similarity=0.007 Sum_probs=52.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
..++|+|+|+ |-+|+.+++.|...|.+|++++|++.+...........+.....+.+.+.+.++++|+||++++.
T Consensus 166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~ 240 (361)
T 1pjc_A 166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLV 240 (361)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCc
Confidence 4589999998 99999999999999999999999875432221111111111112344566667799999999874
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00063 Score=60.78 Aligned_cols=74 Identities=14% Similarity=0.123 Sum_probs=52.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
..+.+|||+|++|-+|..+++.+...|.+|+++++++.+.......+... ..|..+.+++.+.++++|+||+ ++
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~~~~~~~~~~~~~~~~d~vid-~g 197 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEE-AATYAEVPERAKAWGGLDLVLE-VR 197 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSE-EEEGGGHHHHHHHTTSEEEEEE-CS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCE-EEECCcchhHHHHhcCceEEEE-CC
Confidence 35689999999999999999999999999999999766543332233332 2344441233333478999999 87
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00088 Score=59.70 Aligned_cols=66 Identities=17% Similarity=0.192 Sum_probs=46.0
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
.+||.++| .|.+|..+++.|+++||+|++.+|++++.......+... .+...++.+++|+||-|..
T Consensus 5 s~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~-------~~s~~e~~~~~dvvi~~l~ 70 (297)
T 4gbj_A 5 SEKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATV-------VENAIDAITPGGIVFSVLA 70 (297)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEE-------CSSGGGGCCTTCEEEECCS
T ss_pred CCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeE-------eCCHHHHHhcCCceeeecc
Confidence 46899998 899999999999999999999999987765554444332 2344567788999998875
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0023 Score=59.38 Aligned_cols=76 Identities=17% Similarity=0.060 Sum_probs=56.1
Q ss_pred ccCCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEE
Q 017290 17 EREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 17 ~~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi 95 (374)
..|..+...+++|+|+| +|.+|+.+++.+.+.|++|++++..+....... .-..+..++.|.+.+.++++.+|+|.
T Consensus 5 ~~m~~~~~~~k~IlIlG-~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~--ad~~~~~~~~d~~~l~~~~~~~dvI~ 80 (389)
T 3q2o_A 5 LDMTRIILPGKTIGIIG-GGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQV--ADIEIVASYDDLKAIQHLAEISDVVT 80 (389)
T ss_dssp --CCCCCCTTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTT--CSEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred ccccccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHh--CCceEecCcCCHHHHHHHHHhCCEee
Confidence 33444445678999998 688999999999999999999987654322111 11355678888888989888999874
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00086 Score=60.30 Aligned_cols=106 Identities=16% Similarity=0.114 Sum_probs=68.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccc----ccc-----ccceeEEecccchhhHhhhccCCCEE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMT----EDM-----FCHEFHLVDLRVMDNCLKVTKGVDHV 94 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~-----~~i~~~~~dl~~~~~~~~~~~~~d~v 94 (374)
.|||.|+|+ |.+|..++-.|+..+. +|..+++++.+... ... ..+++. .| -.++++++|+|
T Consensus 5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~------~~~a~~~aDvV 76 (318)
T 1ez4_A 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG------EYSDCKDADLV 76 (318)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC------CGGGGTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC------CHHHhCCCCEE
Confidence 379999998 9999999999998876 89999986532211 000 111222 11 14468899999
Q ss_pred EEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 95 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
|..++..... .....+....|+.....+.+.+.+.+.+ .+|.+|.
T Consensus 77 ii~ag~~~~~---g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 122 (318)
T 1ez4_A 77 VITAGAPQKP---GESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAAN 122 (318)
T ss_dssp EECCCC-------------CHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred EECCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 9999864322 1223456778899999999999888755 5555543
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00036 Score=63.77 Aligned_cols=73 Identities=18% Similarity=0.236 Sum_probs=50.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccccccceeEEecccchh---hHhhhc--cCCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDMFCHEFHLVDLRVMD---NCLKVT--KGVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~---~~~~~~--~~~d~vi~~a 98 (374)
...+|||+|+ |-+|..+++.+...|. +|+++++++.+.......+... ..|..+.+ .+.++. +++|+||+++
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~~~~~~~v~~~~~g~g~D~vid~~ 244 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADY-VINPFEEDVVKEVMDITDGNGVDVFLEFS 244 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSE-EECTTTSCHHHHHHHHTTTSCEEEEEECS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE-EECCCCcCHHHHHHHHcCCCCCCEEEECC
Confidence 5678999999 9999999999998999 9999998865433222223322 23443322 233332 2699999999
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
+
T Consensus 245 g 245 (348)
T 2d8a_A 245 G 245 (348)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00059 Score=61.07 Aligned_cols=68 Identities=13% Similarity=0.032 Sum_probs=48.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
++|+|.|+| .|.+|..+++.|++.||+|++++|++.........+..... ..+.++++++|+||-+..
T Consensus 6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~------~~~~e~~~~aDvvi~~vp 73 (303)
T 3g0o_A 6 TDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAA------ASAREFAGVVDALVILVV 73 (303)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEE------SSSTTTTTTCSEEEECCS
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCcccc------CCHHHHHhcCCEEEEECC
Confidence 458999998 89999999999999999999999987543332222222211 223456678899988875
|
| >1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0047 Score=54.57 Aligned_cols=90 Identities=14% Similarity=0.172 Sum_probs=60.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEE-EEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYII-ASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAAD 100 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~-~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~ 100 (374)
.+.++|+|.|++|..|+.+++.+++.|++++ .++.... .. ...++. -.+.+.++.+ .+|++|.+..+
T Consensus 5 ~~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~-g~--~i~G~~-------vy~sl~el~~~~~~Dv~Ii~vp~ 74 (288)
T 1oi7_A 5 NRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKG-GM--EVLGVP-------VYDTVKEAVAHHEVDASIIFVPA 74 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCT-TC--EETTEE-------EESSHHHHHHHSCCSEEEECCCH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCC-Cc--eECCEE-------eeCCHHHHhhcCCCCEEEEecCH
Confidence 3568999999999999999999999999854 4443321 00 111222 1223444555 89999988753
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
..+..+++.|.+.|++.+|.+++
T Consensus 75 -------------------~~~~~~~~ea~~~Gi~~vVi~t~ 97 (288)
T 1oi7_A 75 -------------------PAAADAALEAAHAGIPLIVLITE 97 (288)
T ss_dssp -------------------HHHHHHHHHHHHTTCSEEEECCS
T ss_pred -------------------HHHHHHHHHHHHCCCCEEEEECC
Confidence 23567788888999976776665
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0012 Score=59.26 Aligned_cols=111 Identities=14% Similarity=0.085 Sum_probs=68.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhC--CCEEEEEeCCCCcccccc---cccce--eEEecccchhhHhhhccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSE--GHYIIASDWKKNEHMTED---MFCHE--FHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~---~~~i~--~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|||.|+|+ |.+|..++..|... |++|+++++++....... ..... .....+....++.. ++++|+||-+++
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~ 78 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAG 78 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCC
Confidence 68999997 99999999999985 799999999875322110 00000 00011111122333 789999999997
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
.... ......+....|+.....+.+.+.+...+ .+|.+|.
T Consensus 79 ~p~~---~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tN 119 (310)
T 1guz_A 79 LPRK---PGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSN 119 (310)
T ss_dssp CCCC---TTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCS
T ss_pred CCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 4321 11113345556778888888888776544 5555543
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00083 Score=60.08 Aligned_cols=105 Identities=14% Similarity=0.122 Sum_probs=65.1
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCccccc----cc-----ccceeEEecccchhhHhhhccCCCEEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTE----DM-----FCHEFHLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~-----~~i~~~~~dl~~~~~~~~~~~~~d~vi 95 (374)
|||.|+|+ |.+|..++..|+..|+ +|+++++++.+.... .. ....+.. .+ .+.++++|+||
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~----~~a~~~aDvVI 72 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GG----HSELADAQVVI 72 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---EC----GGGGTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CC----HHHhCCCCEEE
Confidence 68999997 9999999999999999 999999876421110 00 0111211 12 24578999999
Q ss_pred EcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 96 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 96 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
.+++..... .....+....|+...+.+++.+.+.... .+|.+|.
T Consensus 73 i~~~~~~~~---g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tN 117 (304)
T 2v6b_A 73 LTAGANQKP---GESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSN 117 (304)
T ss_dssp ECC---------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSS
T ss_pred EcCCCCCCC---CCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 999753321 1223455677888888898888876544 4444443
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.001 Score=59.63 Aligned_cols=67 Identities=10% Similarity=0.069 Sum_probs=49.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
++|+|.|+| .|.+|..+++.|++.||+|++.+|++.........++. ....+.++++++|+||-+..
T Consensus 8 ~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------~~~~~~e~~~~aDvVi~~vp 74 (306)
T 3l6d_A 8 FEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAH-------LCESVKAALSASPATIFVLL 74 (306)
T ss_dssp CSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCE-------ECSSHHHHHHHSSEEEECCS
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCe-------ecCCHHHHHhcCCEEEEEeC
Confidence 468899998 89999999999999999999999987643332222221 12334556678999998875
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0041 Score=53.83 Aligned_cols=102 Identities=13% Similarity=-0.010 Sum_probs=64.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc-------------------------cccc--ceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE-------------------------DMFC--HEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-------------------------~~~~--i~~~~~ 76 (374)
...+|+|+|+ |-+|+++++.|...|. ++++++...-..... ..+. ++.+..
T Consensus 27 ~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 105 (251)
T 1zud_1 27 LDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQ 105 (251)
T ss_dssp HTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred hcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEec
Confidence 4579999996 5699999999999996 788887653110000 0012 223333
Q ss_pred cccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccC
Q 017290 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147 (374)
Q Consensus 77 dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~ 147 (374)
++ +.+.+.++++++|+||.+.. |...-..+-++|.+.++ .+|..+....+|
T Consensus 106 ~~-~~~~~~~~~~~~DvVi~~~d------------------~~~~r~~l~~~~~~~~~-p~i~~~~~g~~G 156 (251)
T 1zud_1 106 RL-TGEALKDAVARADVVLDCTD------------------NMATRQEINAACVALNT-PLITASAVGFGG 156 (251)
T ss_dssp CC-CHHHHHHHHHHCSEEEECCS------------------SHHHHHHHHHHHHHTTC-CEEEEEEEBTEE
T ss_pred cC-CHHHHHHHHhcCCEEEECCC------------------CHHHHHHHHHHHHHhCC-CEEEEeccccce
Confidence 33 23456677788999999875 33333456678888886 477766554443
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.001 Score=59.78 Aligned_cols=106 Identities=20% Similarity=0.219 Sum_probs=69.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCccccc----cc------ccceeEEecccchhhHhhhccCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTE----DM------FCHEFHLVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~------~~i~~~~~dl~~~~~~~~~~~~~d 92 (374)
+++||.|+|+ |.+|..++..|+..+. +|+++++++...... .. ..+.+. .+ ..+.++++|
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~-~~------~~~al~~aD 76 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW-HG------DYDDCRDAD 76 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE-EC------CGGGTTTCS
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEE-cC------cHHHhCCCC
Confidence 4579999998 9999999999988774 899999875421110 00 011111 11 134678999
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEee
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYAS 141 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~S 141 (374)
+||.+++.....+ ....+....|......+++.+.+...+ .++.+|
T Consensus 77 vViia~~~~~~~g---~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t 123 (316)
T 1ldn_A 77 LVVICAGANQKPG---ETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123 (316)
T ss_dssp EEEECCSCCCCTT---TCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred EEEEcCCCCCCCC---CCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence 9999998654322 123445667888888888888887644 344443
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00043 Score=63.08 Aligned_cols=74 Identities=19% Similarity=0.174 Sum_probs=52.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchh---hHhhhc--cCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD---NCLKVT--KGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~---~~~~~~--~~~d~vi~~a~ 99 (374)
..++|||+|++|-+|..+++.+...|++|+++++++.+.......+... ..|..+.+ .+.++. +++|+||++++
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 244 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADE-TVNYTHPDWPKEVRRLTGGKGADKVVDHTG 244 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE-EEETTSTTHHHHHHHHTTTTCEEEEEESSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCE-EEcCCcccHHHHHHHHhCCCCceEEEECCC
Confidence 5689999999999999999999999999999998765433222223322 23554433 333333 26999999998
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0011 Score=59.57 Aligned_cols=108 Identities=10% Similarity=-0.024 Sum_probs=73.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccc----cc---c-c-cceeEEecccchhhHhhhccCCCE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMT----ED---M-F-CHEFHLVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~---~-~-~i~~~~~dl~~~~~~~~~~~~~d~ 93 (374)
..+||.|+|+ |.+|..++..|+..|. +|++++++...... .. . . ...+... .++. .++++|+
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t-----~d~~-~~~daDi 92 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSG-----KDYS-VSAGSKL 92 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEE-----SSSC-SCSSCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEc-----CCHH-HhCCCCE
Confidence 4589999998 9999999999999886 99999986542111 00 0 0 0111111 1222 3789999
Q ss_pred EEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 94 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 94 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
||-+||.... ......+.+..|+...+.+.+.+.+.+.. .++.+|.
T Consensus 93 VIitaG~p~k---pG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN 139 (330)
T 3ldh_A 93 VVITAGARQQ---EGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE 139 (330)
T ss_dssp EEECCSCCCC---SSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred EEEeCCCCCC---CCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence 9999986432 22344567788999999999988887654 4555554
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00055 Score=62.70 Aligned_cols=75 Identities=15% Similarity=0.018 Sum_probs=49.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccc-cceeEE------ecc-cchhhHhhhccCCCEEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMF-CHEFHL------VDL-RVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~i~~~~------~dl-~~~~~~~~~~~~~d~vi~ 96 (374)
++|+|+|+| .|.+|..++..|.+.|++|++++|++......... ++.+.. ..+ ...+++.++++++|+||.
T Consensus 3 ~~mki~iiG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~ 81 (359)
T 1bg6_A 3 ESKTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI 81 (359)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred CcCeEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEE
Confidence 458999999 59999999999999999999999986542222111 111100 011 012234455678999999
Q ss_pred cccc
Q 017290 97 LAAD 100 (374)
Q Consensus 97 ~a~~ 100 (374)
+...
T Consensus 82 ~v~~ 85 (359)
T 1bg6_A 82 VVPA 85 (359)
T ss_dssp CSCG
T ss_pred eCCc
Confidence 8864
|
| >3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0017 Score=60.77 Aligned_cols=75 Identities=15% Similarity=0.086 Sum_probs=50.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEE-------------ecccchhhHhhhccCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL-------------VDLRVMDNCLKVTKGV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~-------------~dl~~~~~~~~~~~~~ 91 (374)
.|.+|.|+| .||+|..++..|.+.||+|++++.++.+..........+.. +.+.-..+..++++.+
T Consensus 20 ~m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~a 98 (444)
T 3vtf_A 20 HMASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAAT 98 (444)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTS
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcC
Confidence 568999998 99999999999999999999999887643322211111111 1121122344556788
Q ss_pred CEEEEcccc
Q 017290 92 DHVFNLAAD 100 (374)
Q Consensus 92 d~vi~~a~~ 100 (374)
|++|-|.+.
T Consensus 99 d~~~I~VpT 107 (444)
T 3vtf_A 99 DATFIAVGT 107 (444)
T ss_dssp SEEEECCCC
T ss_pred CceEEEecC
Confidence 999988763
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00062 Score=62.34 Aligned_cols=75 Identities=15% Similarity=0.147 Sum_probs=52.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhh---Hhhhc-cCCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDN---CLKVT-KGVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~---~~~~~-~~~d~vi~~a~ 99 (374)
....+|||+||+|-+|..+++.+...|.+|+++++++.+.......+... ..|..+.+. +.+.. +++|+||++++
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-~~~~~~~~~~~~~~~~~~~g~Dvvid~~g 244 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKR-GINYRSEDFAAVIKAETGQGVDIILDMIG 244 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHHSSCEEEEEESCC
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCE-EEeCCchHHHHHHHHHhCCCceEEEECCC
Confidence 35689999999999999999999999999999998876543322223322 234433332 22222 37999999998
|
| >1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0028 Score=49.53 Aligned_cols=88 Identities=15% Similarity=0.095 Sum_probs=57.1
Q ss_pred CCCeEEEEcCc---chhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 25 EKLRISVTGAG---GFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 25 ~~~~ilItGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
.+++|.|+|++ |.+|..+++.|++.||+|+.++.+... ... ..+.-...+.++-+.+|+++-+...
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~-~~i---------~G~~~~~sl~el~~~vDlavi~vp~- 80 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG-EEL---------FGEEAVASLLDLKEPVDILDVFRPP- 80 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT-SEE---------TTEECBSSGGGCCSCCSEEEECSCH-
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCccc-CcC---------CCEEecCCHHHCCCCCCEEEEEeCH-
Confidence 35789999998 899999999999999986665533101 000 1122223344444578988888752
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEee
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~S 141 (374)
..+..+++.|.+.|++.+++.+
T Consensus 81 ------------------~~~~~v~~~~~~~gi~~i~~~~ 102 (140)
T 1iuk_A 81 ------------------SALMDHLPEVLALRPGLVWLQS 102 (140)
T ss_dssp ------------------HHHTTTHHHHHHHCCSCEEECT
T ss_pred ------------------HHHHHHHHHHHHcCCCEEEEcC
Confidence 2234556777788887766543
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00095 Score=60.12 Aligned_cols=109 Identities=17% Similarity=0.150 Sum_probs=64.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCccc--ccc-cccceeE-EecccchhhHhhhccCCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHM--TED-MFCHEFH-LVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~-~~~i~~~-~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
++|||.|+|+ |.+|..++..|...|+ +|++++|++.... ... ..+..+. ...+....+ .+.++++|+||-++
T Consensus 6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~aD~Vii~v 83 (319)
T 1lld_A 6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDD-PEICRDADMVVITA 83 (319)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESC-GGGGTTCSEEEECC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCC-HHHhCCCCEEEECC
Confidence 3589999997 9999999999999999 9999999863321 000 0011000 000110001 13467899999999
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEE
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i 138 (374)
+.... ......+....|+.....+++.+.+.+.+.+|
T Consensus 84 ~~~~~---~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~v 120 (319)
T 1lld_A 84 GPRQK---PGQSRLELVGATVNILKAIMPNLVKVAPNAIY 120 (319)
T ss_dssp CCCCC---TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred CCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 74321 11223344556777777777777665443333
|
| >2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00085 Score=63.92 Aligned_cols=75 Identities=15% Similarity=0.110 Sum_probs=49.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEe-------------cccchhhHhhhccCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLV-------------DLRVMDNCLKVTKGV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~-------------dl~~~~~~~~~~~~~ 91 (374)
..|+|.|+| .|++|..++..|.+.||+|+++++++.+..........++.. .+.-..++.++++.+
T Consensus 7 ~~~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~a 85 (478)
T 2y0c_A 7 GSMNLTIIG-SGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHG 85 (478)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHC
T ss_pred CCceEEEEC-cCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcC
Confidence 468999998 899999999999999999999999865432221111111100 111112334456688
Q ss_pred CEEEEcccc
Q 017290 92 DHVFNLAAD 100 (374)
Q Consensus 92 d~vi~~a~~ 100 (374)
|+||-|...
T Consensus 86 DvviiaVpt 94 (478)
T 2y0c_A 86 DVQFIAVGT 94 (478)
T ss_dssp SEEEECCCC
T ss_pred CEEEEEeCC
Confidence 999999863
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0019 Score=50.84 Aligned_cols=84 Identities=15% Similarity=0.167 Sum_probs=56.0
Q ss_pred CCeEEEEcCc---chhHHHHHHHHHhCCCEEEEEeCCC--CcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 26 KLRISVTGAG---GFIASHIARRLKSEGHYIIASDWKK--NEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 26 ~~~ilItGat---G~iG~~l~~~L~~~g~~V~~~~r~~--~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
+++|.|+|++ |.+|..+++.|++.||+|+.++.+. ... .++. -...+.++.+.+|+++-+...
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----~G~~-------~~~sl~el~~~~Dlvii~vp~ 80 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----LGQQ-------GYATLADVPEKVDMVDVFRNS 80 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE-----TTEE-------CCSSTTTCSSCCSEEECCSCS
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc-----CCee-------ccCCHHHcCCCCCEEEEEeCH
Confidence 5789999998 8999999999999999988877654 211 1221 122233444578998887642
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEe
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYA 140 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~ 140 (374)
.....+++.+.+.+++.++..
T Consensus 81 -------------------~~v~~v~~~~~~~g~~~i~i~ 101 (145)
T 2duw_A 81 -------------------EAAWGVAQEAIAIGAKTLWLQ 101 (145)
T ss_dssp -------------------THHHHHHHHHHHHTCCEEECC
T ss_pred -------------------HHHHHHHHHHHHcCCCEEEEc
Confidence 113455666666888766543
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00048 Score=61.13 Aligned_cols=66 Identities=12% Similarity=0.081 Sum_probs=49.0
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
||+|.|+| .|.+|..+++.|++.||+|++.+|++.+.......++.. .++..++++++|+||-+..
T Consensus 1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-------~~~~~~~~~~advvi~~v~ 66 (287)
T 3pdu_A 1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQ-------ASSPAEVCAACDITIAMLA 66 (287)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEE-------CSCHHHHHHHCSEEEECCS
T ss_pred CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee-------cCCHHHHHHcCCEEEEEcC
Confidence 57899998 899999999999999999999999876543332222221 2234555667899988875
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00057 Score=61.45 Aligned_cols=70 Identities=21% Similarity=0.230 Sum_probs=47.0
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCC--CcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKK--NEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
.+.+|+|.|+| .|.+|..+++.|++.|| +|++++|++ .........++.. .....++++++|+||-+..
T Consensus 21 ~~~~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~-------~~~~~e~~~~aDvVi~~vp 92 (312)
T 3qsg_A 21 QSNAMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSC-------KASVAEVAGECDVIFSLVT 92 (312)
T ss_dssp ----CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEE-------CSCHHHHHHHCSEEEECSC
T ss_pred cCCCCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEE-------eCCHHHHHhcCCEEEEecC
Confidence 44678999998 79999999999999999 999999973 2211111122221 1234456678899998876
Q ss_pred c
Q 017290 100 D 100 (374)
Q Consensus 100 ~ 100 (374)
.
T Consensus 93 ~ 93 (312)
T 3qsg_A 93 A 93 (312)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0026 Score=56.29 Aligned_cols=106 Identities=11% Similarity=0.015 Sum_probs=72.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCccc----cccc----c--cceeEEecccchhhHhhhccCCCEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHM----TEDM----F--CHEFHLVDLRVMDNCLKVTKGVDHV 94 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~----~~~~----~--~i~~~~~dl~~~~~~~~~~~~~d~v 94 (374)
|||.|+|+ |.||+.++-.|+.++. ++..++.++.... +... . ...+... .|+ +.++++|+|
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~----~~~~~aDvV 73 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY----SLLKGSEII 73 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCH----HHhCCCCEE
Confidence 78999995 9999999999888764 8999998753211 0000 0 1112111 122 257899999
Q ss_pred EEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 95 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
|-.||.... ......+.+..|....+.+.+.+.+++.+ .++.+|.
T Consensus 74 vitAG~prk---pGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN 119 (294)
T 2x0j_A 74 VVTAGLARK---PGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp EECCCCCCC---SSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred EEecCCCCC---CCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 999996542 23355677889999999999999998866 4444444
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0057 Score=59.63 Aligned_cols=68 Identities=15% Similarity=0.054 Sum_probs=58.9
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhc-cCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT-KGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~-~~~d~vi~~a~ 99 (374)
++++|.| .|.+|+++++.|.+.|++|++++.++....... .++.+|.++.+.++++- +++|.+|-+.+
T Consensus 349 ~~viIiG-~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~----~~i~gD~t~~~~L~~agi~~ad~vi~~~~ 417 (565)
T 4gx0_A 349 ELIFIIG-HGRIGCAAAAFLDRKPVPFILIDRQESPVCNDH----VVVYGDATVGQTLRQAGIDRASGIIVTTN 417 (565)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS----CEEESCSSSSTHHHHHTTTSCSEEEECCS
T ss_pred CCEEEEC-CCHHHHHHHHHHHHCCCCEEEEECChHHHhhcC----CEEEeCCCCHHHHHhcCccccCEEEEECC
Confidence 8899999 499999999999999999999999987654432 78999999999887764 68999998876
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00095 Score=60.89 Aligned_cols=74 Identities=14% Similarity=0.112 Sum_probs=50.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccc--hhhHhhhc-cCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRV--MDNCLKVT-KGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~--~~~~~~~~-~~~d~vi~~a~ 99 (374)
...+|||+||+|-+|...++.+...|.+|+++++++.+.......+...+ .|..+ .+.+.+.. +++|+||++++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~g~Dvv~d~~g 226 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIV-LNHKESLLNQFKTQGIELVDYVFCTFN 226 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEE-ECTTSCHHHHHHHHTCCCEEEEEESSC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEE-EECCccHHHHHHHhCCCCccEEEECCC
Confidence 56899999999999999999999899999999987654332222333222 22221 12333331 36999999987
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00085 Score=61.02 Aligned_cols=75 Identities=13% Similarity=0.127 Sum_probs=53.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchh---hHhhhc--cCCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD---NCLKVT--KGVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~---~~~~~~--~~~d~vi~~a 98 (374)
..+.+|||+|++|-+|..+++.+...|.+|+++++++.+.......+...+ .|..+.+ .+.+.. +++|+||+++
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~-~~~~~~~~~~~~~~~~~~~g~Dvvid~~ 221 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYV-IDTSTAPLYETVMELTNGIGADAAIDSI 221 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEE-EeCCcccHHHHHHHHhCCCCCcEEEECC
Confidence 356899999999999999999998889999999998765443333333322 2443333 233333 2799999999
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
+
T Consensus 222 g 222 (340)
T 3gms_A 222 G 222 (340)
T ss_dssp C
T ss_pred C
Confidence 8
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00045 Score=58.75 Aligned_cols=68 Identities=18% Similarity=0.109 Sum_probs=47.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEE-EeCCCCccccccc-ccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIA-SDWKKNEHMTEDM-FCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~-~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
++||+|.|+| +|.+|..+++.|.+.|++|++ .+|++.+...... .++.... + ..+.++++|+||.+..
T Consensus 21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~-~------~~~~~~~aDvVilavp 90 (220)
T 4huj_A 21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA-V------ELKDALQADVVILAVP 90 (220)
T ss_dssp GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE-C------CHHHHTTSSEEEEESC
T ss_pred hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc-C------hHHHHhcCCEEEEeCC
Confidence 4578999999 899999999999999999998 7887654332211 1222211 1 1223578999998874
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0014 Score=58.75 Aligned_cols=108 Identities=11% Similarity=0.084 Sum_probs=66.6
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCccccccc----------ccceeEEecccchhhHhhhccCCCE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMTEDM----------FCHEFHLVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~----------~~i~~~~~dl~~~~~~~~~~~~~d~ 93 (374)
||+|.|+| +|.+|..++..|.+.| ++|++++|++........ ..+.+.. .+ + +.++++|+
T Consensus 1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~d---~-~~~~~aDv 72 (309)
T 1hyh_A 1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---ND---W-AALADADV 72 (309)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SC---G-GGGTTCSE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe---CC---H-HHhCCCCE
Confidence 47999999 8999999999999999 899999998643211110 0111111 12 2 45789999
Q ss_pred EEEcccccCCcc-cccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEee
Q 017290 94 VFNLAADMGGMG-FIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYAS 141 (374)
Q Consensus 94 vi~~a~~~~~~~-~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~S 141 (374)
||-+++...... ............|+.....+++.+.+...+ .+|.+|
T Consensus 73 Viiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t 122 (309)
T 1hyh_A 73 VISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS 122 (309)
T ss_dssp EEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 999997532100 011122334556777778888887776544 444433
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0033 Score=57.99 Aligned_cols=70 Identities=17% Similarity=0.188 Sum_probs=53.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
|++|+|+|+ |.+|+.+++.|.+.|++|++++..+...... ..-..+..|..|.+.+.++.+++|.|+...
T Consensus 1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~--~~~~~~~~~~~d~~~l~~~~~~~d~v~~~~ 70 (380)
T 3ax6_A 1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQ--VADEQIVAGFFDSERIEDLVKGSDVTTYDL 70 (380)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGG--GSSEEEECCTTCHHHHHHHHHTCSEEEESC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhh--hCceEEECCCCCHHHHHHHHhcCCEEEecc
Confidence 578999995 8999999999999999999998765432111 111355678888888888888999988643
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0032 Score=55.99 Aligned_cols=37 Identities=16% Similarity=0.130 Sum_probs=31.7
Q ss_pred CCCe-EEEEc-Cc-----------------chhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 25 EKLR-ISVTG-AG-----------------GFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 25 ~~~~-ilItG-at-----------------G~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
.+++ ||||+ || |..|.+++++++.+|++|+.+.+..+
T Consensus 35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 4566 99875 55 89999999999999999999998754
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00076 Score=60.10 Aligned_cols=76 Identities=17% Similarity=-0.040 Sum_probs=52.3
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccccc-cceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDMF-CHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
....++|+|+|+ |-+|+.++..|++.|. +|++++|+..+....... +... .+..+.+.+.+.++++|+||++.+.
T Consensus 138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~--~~~~~~~~~~~~~~~aDivIn~t~~ 214 (297)
T 2egg_A 138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR--SAYFSLAEAETRLAEYDIIINTTSV 214 (297)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS--CCEECHHHHHHTGGGCSEEEECSCT
T ss_pred CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc--CceeeHHHHHhhhccCCEEEECCCC
Confidence 346789999996 7799999999999997 999999986543221100 0000 0122234566677899999999985
Q ss_pred c
Q 017290 101 M 101 (374)
Q Consensus 101 ~ 101 (374)
.
T Consensus 215 ~ 215 (297)
T 2egg_A 215 G 215 (297)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0024 Score=57.29 Aligned_cols=69 Identities=16% Similarity=0.113 Sum_probs=49.2
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccccccccce-eEEecccchhhHhh-hccCCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTEDMFCHE-FHLVDLRVMDNCLK-VTKGVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~i~-~~~~dl~~~~~~~~-~~~~~d~vi~~a~ 99 (374)
++.|+|.|+| .|.+|..+++.|.+.|+ +|++++|++.........++. ... .++.+ +++++|+||.+..
T Consensus 31 ~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~------~~~~~~~~~~aDvVilavp 103 (314)
T 3ggo_A 31 LSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT------TSIAKVEDFSPDFVMLSSP 103 (314)
T ss_dssp CSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE------SCTTGGGGGCCSEEEECSC
T ss_pred cCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhc------CCHHHHhhccCCEEEEeCC
Confidence 3458999999 89999999999999999 999999987543222222221 011 22344 5778999999875
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.00058 Score=61.71 Aligned_cols=75 Identities=16% Similarity=0.095 Sum_probs=52.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchh---hHhhhcc--CCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD---NCLKVTK--GVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~---~~~~~~~--~~d~vi~~a 98 (374)
..+.+|||+||+|-+|..+++.+...|.+|+++++++.+.......+... ..|..+.+ .+.+... ++|+||+++
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvid~~ 217 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWE-TIDYSHEDVAKRVLELTDGKKCPVVYDGV 217 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTCCEEEEEESS
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE-EEeCCCccHHHHHHHHhCCCCceEEEECC
Confidence 35689999999999999999999989999999998765433322223222 23443333 3333332 799999999
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
+
T Consensus 218 g 218 (325)
T 3jyn_A 218 G 218 (325)
T ss_dssp C
T ss_pred C
Confidence 8
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0013 Score=60.15 Aligned_cols=70 Identities=13% Similarity=0.089 Sum_probs=49.3
Q ss_pred CeEEEEcCcchhHHHH-HHHH-HhCCCE-EEEEeCCCC---cccccccccceeEEecccchhh--HhhhccCCCEEEEcc
Q 017290 27 LRISVTGAGGFIASHI-ARRL-KSEGHY-IIASDWKKN---EHMTEDMFCHEFHLVDLRVMDN--CLKVTKGVDHVFNLA 98 (374)
Q Consensus 27 ~~ilItGatG~iG~~l-~~~L-~~~g~~-V~~~~r~~~---~~~~~~~~~i~~~~~dl~~~~~--~~~~~~~~d~vi~~a 98 (374)
.+|||+|+ |-+|... ++.+ ...|.+ |++++++++ +.......+...+ |..+.+. +.++-.++|+||+++
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~i~~~~gg~Dvvid~~ 250 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV--DSRQTPVEDVPDVYEQMDFIYEAT 250 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE--ETTTSCGGGHHHHSCCEEEEEECS
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc--CCCccCHHHHHHhCCCCCEEEECC
Confidence 79999999 9999999 9888 777987 999999876 4333333455444 5443221 333312689999998
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
+
T Consensus 251 g 251 (357)
T 2b5w_A 251 G 251 (357)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0019 Score=61.55 Aligned_cols=76 Identities=9% Similarity=0.070 Sum_probs=49.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhC--CCEEEEEeCCCCcccccccccceeEEe------------cccchhhHhhhcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSE--GHYIIASDWKKNEHMTEDMFCHEFHLV------------DLRVMDNCLKVTK 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~i~~~~~------------dl~~~~~~~~~~~ 89 (374)
+++|+|.|+| .|++|..++..|.+. ||+|++++|++.+..........+... .+.-..++.++++
T Consensus 7 ~~~mkI~VIG-~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~ 85 (481)
T 2o3j_A 7 GKVSKVVCVG-AGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIA 85 (481)
T ss_dssp CCCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHH
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhh
Confidence 3568999998 799999999999998 799999999865432222111111100 1111112334566
Q ss_pred CCCEEEEcccc
Q 017290 90 GVDHVFNLAAD 100 (374)
Q Consensus 90 ~~d~vi~~a~~ 100 (374)
++|+||-|.+.
T Consensus 86 ~aDvvii~Vpt 96 (481)
T 2o3j_A 86 EADLIFISVNT 96 (481)
T ss_dssp HCSEEEECCCC
T ss_pred cCCEEEEecCC
Confidence 88999999763
|
| >3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0029 Score=60.00 Aligned_cols=36 Identities=14% Similarity=0.186 Sum_probs=33.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhC-CC-EEEEEeCCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSE-GH-YIIASDWKKN 61 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~ 61 (374)
.+|+|.|+| .|++|..++..|++. || +|+++++++.
T Consensus 17 ~~mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 558999998 899999999999999 99 9999999987
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0021 Score=57.22 Aligned_cols=67 Identities=21% Similarity=0.209 Sum_probs=47.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
++|+|.|+| .|.+|..+++.|.+.|++|++++|++.........++.. .....++++++|+||.+..
T Consensus 3 ~~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~~D~vi~~vp 69 (301)
T 3cky_A 3 KSIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQA-------CENNQKVAAASDIIFTSLP 69 (301)
T ss_dssp -CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCee-------cCCHHHHHhCCCEEEEECC
Confidence 458999998 799999999999999999999998865432222222221 1223445567899999875
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.00096 Score=60.86 Aligned_cols=74 Identities=24% Similarity=0.362 Sum_probs=52.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCCCCcccccccccceeEEecccchhh---Hhhhc--cCCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSE-GHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDN---CLKVT--KGVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~---~~~~~--~~~d~vi~~a 98 (374)
..++|||+|++|-||..+++.+... |.+|+++++++.+.......+... ..|..+.+. +.++. .++|+||+++
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 248 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADY-VINASMQDPLAEIRRITESKGVDAVIDLN 248 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCE-EecCCCccHHHHHHHHhcCCCceEEEECC
Confidence 5689999999999999999999998 999999998765433222222222 234444332 44444 3799999999
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
+
T Consensus 249 g 249 (347)
T 1jvb_A 249 N 249 (347)
T ss_dssp C
T ss_pred C
Confidence 8
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.002 Score=56.93 Aligned_cols=64 Identities=9% Similarity=0.020 Sum_probs=46.0
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
||+|.|+| .|.+|..++..|.+ |++|++++|++.........++... + ..++++++|+||.+..
T Consensus 1 M~~i~iiG-~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~--~------~~~~~~~~D~vi~~v~ 64 (289)
T 2cvz_A 1 MEKVAFIG-LGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEA--V------PLERVAEARVIFTCLP 64 (289)
T ss_dssp -CCEEEEC-CSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEE--C------CGGGGGGCSEEEECCS
T ss_pred CCeEEEEc-ccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCccc--C------HHHHHhCCCEEEEeCC
Confidence 47899998 79999999999999 9999999998754332222222221 1 3345668999999876
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.002 Score=59.17 Aligned_cols=74 Identities=11% Similarity=0.092 Sum_probs=54.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-cccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
...+|||+|+ |-+|..+++.+...|.+|+++++++.+..... ..+... ..|..+.+.+.++..++|+||++++.
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~-v~~~~~~~~~~~~~~~~D~vid~~g~ 261 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS-FLVSRDQEQMQAAAGTLDGIIDTVSA 261 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSE-EEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCce-EEeccCHHHHHHhhCCCCEEEECCCc
Confidence 5679999996 99999999999989999999998876533222 223322 23555556666666789999999984
|
| >3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0019 Score=60.39 Aligned_cols=74 Identities=15% Similarity=0.201 Sum_probs=48.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeE-----------EecccchhhHhhhccCCC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFH-----------LVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~-----------~~dl~~~~~~~~~~~~~d 92 (374)
..+|+|.|+| +|++|..++..|.+ ||+|+++++++.+..........+. .+.+.-..++.++++++|
T Consensus 34 ~~~mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aD 111 (432)
T 3pid_A 34 SEFMKITISG-TGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNAD 111 (432)
T ss_dssp -CCCEEEEEC-CSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCS
T ss_pred cCCCEEEEEC-cCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCC
Confidence 3568999998 79999999999887 9999999998764322211100000 011222234556778999
Q ss_pred EEEEccc
Q 017290 93 HVFNLAA 99 (374)
Q Consensus 93 ~vi~~a~ 99 (374)
+||-+..
T Consensus 112 vViiaVP 118 (432)
T 3pid_A 112 YVIIATP 118 (432)
T ss_dssp EEEECCC
T ss_pred EEEEeCC
Confidence 9998865
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.00078 Score=62.20 Aligned_cols=75 Identities=20% Similarity=0.174 Sum_probs=53.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc-ccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM-FCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
..+++|+|+|+ |-||+.+++.+...|.+|++++|++.+...... .+..+ ..+..+...+.+.++++|+||.+++.
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~-~~~~~~~~~l~~~l~~aDvVi~~~~~ 241 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRI-HTRYSSAYELEGAVKRADLVIGAVLV 241 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSS-EEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCee-EeccCCHHHHHHHHcCCCEEEECCCc
Confidence 46789999997 999999999999999999999998654221111 12121 12233445677777899999998874
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0014 Score=59.62 Aligned_cols=72 Identities=22% Similarity=0.245 Sum_probs=48.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccccccceeEEecccchh---hHhhh-ccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDMFCHEFHLVDLRVMD---NCLKV-TKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~---~~~~~-~~~~d~vi~~a~ 99 (374)
...+|||+|+ |-+|..+++.+...|. +|+++++++.+....... ... ..|..+.+ .+.++ -+++|+||++++
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~-v~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADR-LVNPLEEDLLEVVRRVTGSGVEVLLEFSG 240 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSE-EECTTTSCHHHHHHHHHSSCEEEEEECSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHh-ccCcCccCHHHHHHHhcCCCCCEEEECCC
Confidence 5678999999 9999999999988998 999999886543322222 111 23433322 22222 137999999997
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0019 Score=58.82 Aligned_cols=75 Identities=20% Similarity=0.142 Sum_probs=52.2
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEeccc-c-hhhHhhhcc--CCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLR-V-MDNCLKVTK--GVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~-~-~~~~~~~~~--~~d~vi~~a~ 99 (374)
..+.+|||+||+|-+|..+++.+...|.+|+++++++.+.......+...+ .|.. + .+.+.+... ++|+||++++
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v-~~~~~~~~~~v~~~~~~~g~Dvvid~~g 236 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIV-LPLEEGWAKAVREATGGAGVDMVVDPIG 236 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEE-EESSTTHHHHHHHHTTTSCEEEEEESCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEE-ecCchhHHHHHHHHhCCCCceEEEECCc
Confidence 356899999999999999999999999999999998765433222233222 2222 1 123333332 6999999998
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0039 Score=56.12 Aligned_cols=105 Identities=14% Similarity=0.102 Sum_probs=66.8
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccccc---cc------cceeEEecccchhhHhhhccCCCEEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTED---MF------CHEFHLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~---~~------~i~~~~~dl~~~~~~~~~~~~~d~vi 95 (374)
|||.|+|+ |.+|..++..|+..|+ +|+++++++....... .. ...+. . ++ .+.++++|+||
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~d----~~~~~~aDvVi 72 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY-A--GD----YADLKGSDVVI 72 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE-E--CC----GGGGTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE-e--CC----HHHhCCCCEEE
Confidence 68999997 9999999999999999 9999999864321110 00 01111 1 12 23568999999
Q ss_pred EcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 96 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 96 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
.+++..... .....+....|+.....+++.+.+.... .+|.+|.
T Consensus 73 iav~~~~~~---g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tN 117 (319)
T 1a5z_A 73 VAAGVPQKP---GETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTN 117 (319)
T ss_dssp ECCCCCCCS---SCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred EccCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 999853211 1112334555777778888887776544 4554443
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.74 E-value=0.00077 Score=60.07 Aligned_cols=66 Identities=12% Similarity=0.215 Sum_probs=47.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
+|+|.|+| .|.+|..++..|.+.|++|++++|++.........++.. ..++.++++++|+||.+..
T Consensus 5 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~~D~vi~~v~ 70 (299)
T 1vpd_A 5 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET-------ASTAKAIAEQCDVIITMLP 70 (299)
T ss_dssp -CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred cceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCee-------cCCHHHHHhCCCEEEEECC
Confidence 37999999 799999999999999999999998865432222212221 1223445667899999986
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0019 Score=56.76 Aligned_cols=71 Identities=14% Similarity=0.055 Sum_probs=52.0
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
....++++|+|+ |-+|+.++..|.+.|. +|++++|+..+...... .+.. ...+++.+.++++|+||++...
T Consensus 114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~~~-----~~~~~~~~~~~~aDiVInaTp~ 185 (277)
T 3don_A 114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NINK-----INLSHAESHLDEFDIIINTTPA 185 (277)
T ss_dssp TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CCEE-----ECHHHHHHTGGGCSEEEECCC-
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hccc-----ccHhhHHHHhcCCCEEEECccC
Confidence 346789999995 8899999999999998 89999999765443321 1111 1234566667889999999763
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0025 Score=57.37 Aligned_cols=66 Identities=20% Similarity=0.114 Sum_probs=47.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCccc-------ccccccceeEEecccchh-hHhhhccCCCEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHM-------TEDMFCHEFHLVDLRVMD-NCLKVTKGVDHVF 95 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-------~~~~~~i~~~~~dl~~~~-~~~~~~~~~d~vi 95 (374)
++|+|.|+| .|.+|..++..|++.| |+|++.+|++.... .....++ .. ...++++++|+||
T Consensus 23 M~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~---------~~~s~~e~~~~aDvVi 92 (317)
T 4ezb_A 23 MMTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV---------EPLDDVAGIACADVVL 92 (317)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC---------EEESSGGGGGGCSEEE
T ss_pred cCCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC---------CCCCHHHHHhcCCEEE
Confidence 458999999 8999999999999999 99999999863110 0011122 12 3345677899999
Q ss_pred Ecccc
Q 017290 96 NLAAD 100 (374)
Q Consensus 96 ~~a~~ 100 (374)
-+...
T Consensus 93 ~avp~ 97 (317)
T 4ezb_A 93 SLVVG 97 (317)
T ss_dssp ECCCG
T ss_pred EecCC
Confidence 98763
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0023 Score=57.10 Aligned_cols=73 Identities=15% Similarity=0.101 Sum_probs=53.2
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
....+++|+|+| .|-+|+.+++.|...|.+|++.+|+..+.......++..+ +...+.++++++|+||.+...
T Consensus 153 ~~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDvVi~~~p~ 225 (300)
T 2rir_A 153 YTIHGSQVAVLG-LGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPF-----HTDELKEHVKDIDICINTIPS 225 (300)
T ss_dssp SCSTTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEE-----EGGGHHHHSTTCSEEEECCSS
T ss_pred CCCCCCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEE-----chhhHHHHhhCCCEEEECCCh
Confidence 455779999999 5999999999999999999999998643221111122221 124567778899999999863
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0019 Score=61.03 Aligned_cols=41 Identities=17% Similarity=0.088 Sum_probs=35.3
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH 63 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 63 (374)
...+.+|||+||+|-||..+++.+...|.+|+++++++.+.
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~ 258 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKE 258 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 34568999999999999999999999999999998776543
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0028 Score=57.86 Aligned_cols=73 Identities=10% Similarity=0.059 Sum_probs=50.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccc----hhhHhhhc-----cCCCEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRV----MDNCLKVT-----KGVDHVF 95 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~----~~~~~~~~-----~~~d~vi 95 (374)
...+|||+|+ |-+|...++.+...|.+|+++++++.+.......+... ..|..+ .+.+.+.. +++|+||
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-~~~~~~~~~~~~~i~~~~~~~~g~g~D~vi 245 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADV-TLVVDPAKEEESSIIERIRSAIGDLPNVTI 245 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSE-EEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCE-EEcCcccccHHHHHHHHhccccCCCCCEEE
Confidence 4679999996 99999999999889999999988765533222233322 123332 23444433 3699999
Q ss_pred Eccc
Q 017290 96 NLAA 99 (374)
Q Consensus 96 ~~a~ 99 (374)
++++
T Consensus 246 d~~g 249 (352)
T 1e3j_A 246 DCSG 249 (352)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 9997
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0036 Score=52.58 Aligned_cols=49 Identities=18% Similarity=0.239 Sum_probs=41.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
.+|+|.|+| .|.+|+.++..|.+.|++|++++|++. .++++|+||-+..
T Consensus 18 ~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-------------------------~~~~aD~vi~av~ 66 (209)
T 2raf_A 18 QGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-------------------------ATTLGEIVIMAVP 66 (209)
T ss_dssp --CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-------------------------CSSCCSEEEECSC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-------------------------HhccCCEEEEcCC
Confidence 568999999 899999999999999999999988753 4567899998875
|
| >2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0032 Score=59.83 Aligned_cols=74 Identities=15% Similarity=0.087 Sum_probs=48.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhC--CCEEEEEeCCCCcccccccccceeEE------------ecccchhhHhhhccC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSE--GHYIIASDWKKNEHMTEDMFCHEFHL------------VDLRVMDNCLKVTKG 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~i~~~~------------~dl~~~~~~~~~~~~ 90 (374)
++|+|.|+| .|++|..++..|++. ||+|++++|++.+..........+.. ..+.-..++.+++++
T Consensus 4 ~~mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~ 82 (467)
T 2q3e_A 4 EIKKICCIG-AGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKE 82 (467)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH
T ss_pred CccEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhc
Confidence 358999998 799999999999998 89999999986543221111111100 011111233445668
Q ss_pred CCEEEEccc
Q 017290 91 VDHVFNLAA 99 (374)
Q Consensus 91 ~d~vi~~a~ 99 (374)
+|+||-+..
T Consensus 83 aDvViiaVp 91 (467)
T 2q3e_A 83 ADLVFISVN 91 (467)
T ss_dssp CSEEEECCC
T ss_pred CCEEEEEcC
Confidence 999999976
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0026 Score=56.55 Aligned_cols=71 Identities=14% Similarity=0.138 Sum_probs=52.2
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
...+++|+|+| .|-+|+.+++.|...|.+|++++|+..+.......++.++ +.+.+.++++++|+||.+..
T Consensus 152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDvVi~~~p 222 (293)
T 3d4o_A 152 TIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPF-----HISKAAQELRDVDVCINTIP 222 (293)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEE-----EGGGHHHHTTTCSEEEECCS
T ss_pred CCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeec-----ChhhHHHHhcCCCEEEECCC
Confidence 45679999999 6999999999999999999999998653221111222321 22456677889999999875
|
| >2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.019 Score=50.85 Aligned_cols=90 Identities=12% Similarity=0.134 Sum_probs=58.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMG 102 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~ 102 (374)
...+++|.|++|..|+.+++.|++.|++++ ...++..... ...++. -...+.++.+ .+|++|.+..+
T Consensus 12 ~~~~v~V~Gasg~~G~~~~~~l~~~g~~~V-~~VnP~~~g~-~i~G~~-------vy~sl~el~~~~~~Dv~ii~vp~-- 80 (294)
T 2yv1_A 12 ENTKAIVQGITGRQGSFHTKKMLECGTKIV-GGVTPGKGGQ-NVHGVP-------VFDTVKEAVKETDANASVIFVPA-- 80 (294)
T ss_dssp TTCCEEEETTTSHHHHHHHHHHHHTTCCEE-EEECTTCTTC-EETTEE-------EESSHHHHHHHHCCCEEEECCCH--
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhCCCeEE-EEeCCCCCCc-eECCEe-------eeCCHHHHhhcCCCCEEEEccCH--
Confidence 456788999999999999999999999833 2223332110 011222 2233445555 89999988753
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
..+..+++.|.+.|++.+|.+++
T Consensus 81 -----------------~~~~~~v~ea~~~Gi~~vVi~t~ 103 (294)
T 2yv1_A 81 -----------------PFAKDAVFEAIDAGIELIVVITE 103 (294)
T ss_dssp -----------------HHHHHHHHHHHHTTCSEEEECCS
T ss_pred -----------------HHHHHHHHHHHHCCCCEEEEECC
Confidence 23567788888899976776555
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0012 Score=57.58 Aligned_cols=67 Identities=21% Similarity=0.201 Sum_probs=47.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc-ccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM-FCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
+||+|.|+| .|.+|+.+++.|.+.|++|.+++|++........ .++.+ ..++.++++++|+||.+..
T Consensus 2 ~~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~~D~Vi~~v~ 69 (259)
T 2ahr_A 2 NAMKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY-------AMSHQDLIDQVDLVILGIK 69 (259)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB-------CSSHHHHHHTCSEEEECSC
T ss_pred CccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe-------eCCHHHHHhcCCEEEEEeC
Confidence 458999999 8999999999999999999999988654322211 12221 1234455668999999986
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0021 Score=57.56 Aligned_cols=105 Identities=11% Similarity=0.078 Sum_probs=70.0
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCcccc----ccc-----ccceeEEecccchhhHhhhccCCCEEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMT----EDM-----FCHEFHLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~-----~~i~~~~~dl~~~~~~~~~~~~~d~vi 95 (374)
|||.|+|+ |.+|..++-.|+..+ .+|..+++++.+... ... ..+.+.. + + .++++++|+||
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD~Vi 72 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--S----YGDLEGARAVV 72 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGTTEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence 68999997 999999999998886 689999987532211 000 1122221 1 1 34588999999
Q ss_pred EcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeec
Q 017290 96 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASS 142 (374)
Q Consensus 96 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss 142 (374)
..++..... ..........|+...+.+.+.+.+.+.+ .+|.+|.
T Consensus 73 i~ag~~~~~---g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (310)
T 2xxj_A 73 LAAGVAQRP---GETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN 117 (310)
T ss_dssp ECCCCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred ECCCCCCCC---CcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 999864322 1223345667888888888888887654 5555543
|
| >2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.016 Score=51.38 Aligned_cols=91 Identities=11% Similarity=0.135 Sum_probs=58.7
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEE-EEeCCCCcccccccccceeEEecccchhhHhhhcc--C-CCEEEEcc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYII-ASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--G-VDHVFNLA 98 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~-~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~-~d~vi~~a 98 (374)
-....+|+|.|++|..|+.+++.|++.|++++ .++ +..... ...++. -.+.+.++.+ . +|++|.+.
T Consensus 10 ~~~~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~Vn--P~~~g~-~i~G~~-------vy~sl~el~~~~~~~DvaIi~v 79 (297)
T 2yv2_A 10 VDSETRVLVQGITGREGSFHAKAMLEYGTKVVAGVT--PGKGGS-EVHGVP-------VYDSVKEALAEHPEINTSIVFV 79 (297)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC--TTCTTC-EETTEE-------EESSHHHHHHHCTTCCEEEECC
T ss_pred hCCCCEEEEECCCCCHHHHHHHHHHhCCCcEEEEeC--CCCCCc-eECCEe-------eeCCHHHHhhcCCCCCEEEEec
Confidence 33557788899999999999999999999843 333 322100 011222 2223444444 4 89999887
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
.+. .+..+++.|.+.|++.+|.+++
T Consensus 80 p~~-------------------~~~~~v~ea~~~Gi~~vVi~t~ 104 (297)
T 2yv2_A 80 PAP-------------------FAPDAVYEAVDAGIRLVVVITE 104 (297)
T ss_dssp CGG-------------------GHHHHHHHHHHTTCSEEEECCC
T ss_pred CHH-------------------HHHHHHHHHHHCCCCEEEEECC
Confidence 532 2466788888899976776655
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.002 Score=57.95 Aligned_cols=66 Identities=17% Similarity=0.112 Sum_probs=47.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
+|+|.|+| .|.+|+.++..|.+.|++|++++|++.........++.. .....++++++|+||-+..
T Consensus 30 ~~~I~iIG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~~DvVi~av~ 95 (316)
T 2uyy_A 30 DKKIGFLG-LGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARL-------GRTPAEVVSTCDITFACVS 95 (316)
T ss_dssp SSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEE-------CSCHHHHHHHCSEEEECCS
T ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEE-------cCCHHHHHhcCCEEEEeCC
Confidence 47899999 699999999999999999999999866433222222221 1123445567899998876
|
| >2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.017 Score=49.34 Aligned_cols=57 Identities=21% Similarity=0.274 Sum_probs=41.6
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEE-EEEeCCCCcccccccccceeEEecccchhhHhhhc-cCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYI-IASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT-KGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V-~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~-~~~d~vi~~a~ 99 (374)
|||.|+|. |.+|+.+++.|.+.|++| .+.+++++ . . . . ..+ +.+++ .++|+||.|..
T Consensus 1 m~vgiIG~-G~mG~~~~~~l~~~g~~lv~v~d~~~~-~-~----~---~---~~~---~~~l~~~~~DvVv~~~~ 59 (236)
T 2dc1_A 1 MLVGLIGY-GAIGKFLAEWLERNGFEIAAILDVRGE-H-E----K---M---VRG---IDEFLQREMDVAVEAAS 59 (236)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCC-C-T----T---E---ESS---HHHHTTSCCSEEEECSC
T ss_pred CEEEEECC-CHHHHHHHHHHhcCCCEEEEEEecCcc-h-h----h---h---cCC---HHHHhcCCCCEEEECCC
Confidence 58999995 999999999999889998 56676632 1 1 0 1 122 34445 68999999986
|
| >3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0056 Score=46.47 Aligned_cols=86 Identities=22% Similarity=0.132 Sum_probs=57.3
Q ss_pred CCCCeEEEEcCc---chhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 24 SEKLRISVTGAG---GFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 24 ~~~~~ilItGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
+++++|+|+|++ +..|..+++.|++.||+|+.+.-+..... + .-.+.++. ++-. +|.++-+...
T Consensus 2 ~~p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~-----G-~~~y~sl~------dlp~-vDlavi~~p~ 68 (122)
T 3ff4_A 2 NAMKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVL-----G-KTIINERP------VIEG-VDTVTLYINP 68 (122)
T ss_dssp CCCCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEET-----T-EECBCSCC------CCTT-CCEEEECSCH
T ss_pred CCCCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCC-----C-eeccCChH------HCCC-CCEEEEEeCH
Confidence 356889999998 78999999999999999998875432211 1 11123333 3335 7877776642
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
..+..+++.|.+.|++.+ .+++
T Consensus 69 -------------------~~v~~~v~e~~~~g~k~v-~~~~ 90 (122)
T 3ff4_A 69 -------------------QNQLSEYNYILSLKPKRV-IFNP 90 (122)
T ss_dssp -------------------HHHGGGHHHHHHHCCSEE-EECT
T ss_pred -------------------HHHHHHHHHHHhcCCCEE-EECC
Confidence 224556788888899764 4544
|
| >4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0072 Score=56.85 Aligned_cols=73 Identities=16% Similarity=0.166 Sum_probs=51.0
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEE-------------ecccchhhHhhhccCCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL-------------VDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~-------------~dl~~~~~~~~~~~~~d 92 (374)
.-+|.|+| .|++|..++..|.+.||+|++++|++.+...........+. +.+.-..++.++++++|
T Consensus 8 ~~~~~vIG-lG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD 86 (446)
T 4a7p_A 8 SVRIAMIG-TGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD 86 (446)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred ceEEEEEc-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence 46799998 89999999999999999999999998754333221111111 11222234556778999
Q ss_pred EEEEccc
Q 017290 93 HVFNLAA 99 (374)
Q Consensus 93 ~vi~~a~ 99 (374)
+||-|.+
T Consensus 87 vvii~Vp 93 (446)
T 4a7p_A 87 AVFIAVG 93 (446)
T ss_dssp EEEECCC
T ss_pred EEEEEcC
Confidence 9999975
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0013 Score=60.52 Aligned_cols=71 Identities=11% Similarity=0.142 Sum_probs=49.9
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC---CcccccccccceeEEecccc--hhhHhhhccCCCEEEEcccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK---NEHMTEDMFCHEFHLVDLRV--MDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~~~~~~i~~~~~dl~~--~~~~~~~~~~~d~vi~~a~~ 100 (374)
+.+|||+|+ |-+|..+++.+...|.+|+++++++ .+.......+...+ | .+ .+.+.+.-.++|+||++++.
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~~~~~~~~~~~~~~~d~vid~~g~ 256 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY--N-SSNGYDKLKDSVGKFDVIIDATGA 256 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE--E-CTTCSHHHHHHHCCEEEEEECCCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee--c-hHHHHHHHHHhCCCCCEEEECCCC
Confidence 689999999 9999999999988999999999987 44322222344443 4 33 12222211479999999983
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.00081 Score=61.54 Aligned_cols=76 Identities=14% Similarity=0.141 Sum_probs=49.7
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc--------ccceeEEecccchhhHhhhccCCCE
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM--------FCHEFHLVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~i~~~~~dl~~~~~~~~~~~~~d~ 93 (374)
|.+++|+|.|+| +|.+|..++..|.++|++|++++|++........ +++.+ ...+.-..++.++++++|+
T Consensus 25 m~~~~mkI~VIG-aG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l-~~~i~~t~d~~ea~~~aDv 102 (356)
T 3k96_A 25 MEPFKHPIAILG-AGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPF-PETLKAYCDLKASLEGVTD 102 (356)
T ss_dssp --CCCSCEEEEC-CSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCC-CTTEEEESCHHHHHTTCCE
T ss_pred ccccCCeEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCcc-CCCeEEECCHHHHHhcCCE
Confidence 444568999999 6999999999999999999999998643211111 01110 1111112345566788999
Q ss_pred EEEccc
Q 017290 94 VFNLAA 99 (374)
Q Consensus 94 vi~~a~ 99 (374)
||-+..
T Consensus 103 VilaVp 108 (356)
T 3k96_A 103 ILIVVP 108 (356)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 998864
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0018 Score=61.37 Aligned_cols=75 Identities=16% Similarity=0.100 Sum_probs=51.4
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccch--------------------hh
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVM--------------------DN 83 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~--------------------~~ 83 (374)
..+.+|||+||+|-+|...++.+...|.+|+++++++.+.......+...+ .|..+. +.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~v-i~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAI-IDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEE-EETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEE-EecCcCcccccccccccchHHHHHHHHH
Confidence 456889999999999999999999999999999876654333222333222 122111 33
Q ss_pred Hhhhc--cCCCEEEEccc
Q 017290 84 CLKVT--KGVDHVFNLAA 99 (374)
Q Consensus 84 ~~~~~--~~~d~vi~~a~ 99 (374)
+.++. +++|+||++++
T Consensus 306 i~~~t~g~g~Dvvid~~G 323 (456)
T 3krt_A 306 IRELTGGEDIDIVFEHPG 323 (456)
T ss_dssp HHHHHTSCCEEEEEECSC
T ss_pred HHHHhCCCCCcEEEEcCC
Confidence 44443 37999999987
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0022 Score=56.90 Aligned_cols=66 Identities=17% Similarity=0.196 Sum_probs=45.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
+||+|.|+| .|.+|+.+++.|.+.|++|++++ ++.........++. ....+.++++++|+||.+..
T Consensus 2 ~~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~-------~~~~~~~~~~~~D~vi~~vp 67 (295)
T 1yb4_A 2 NAMKLGFIG-LGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAV-------NVETARQVTEFADIIFIMVP 67 (295)
T ss_dssp --CEEEECC-CSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCB-------CCSSHHHHHHTCSEEEECCS
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCc-------ccCCHHHHHhcCCEEEEECC
Confidence 357999998 79999999999999999999888 65443222221221 12234455678999999875
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.003 Score=55.12 Aligned_cols=66 Identities=14% Similarity=0.118 Sum_probs=46.9
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCE-EEEEeCCCCcccccccc-cceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHMTEDMF-CHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~-~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
+|+|.|+| .|.+|+.+++.|.+.|++ |.+++|++......... ++.+ . .++.++++++|+||-+..
T Consensus 10 ~m~i~iiG-~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~-~------~~~~~~~~~~Dvvi~av~ 77 (266)
T 3d1l_A 10 DTPIVLIG-AGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEY-T------TDLAEVNPYAKLYIVSLK 77 (266)
T ss_dssp GCCEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEE-E------SCGGGSCSCCSEEEECCC
T ss_pred CCeEEEEc-CCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCce-e------CCHHHHhcCCCEEEEecC
Confidence 47899999 599999999999999998 88998876543222111 2221 1 223445678999999886
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.017 Score=52.56 Aligned_cols=97 Identities=14% Similarity=0.104 Sum_probs=64.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc---------------------------ccccceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE---------------------------DMFCHEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---------------------------~~~~i~~~~~ 76 (374)
...+|+|+|+ |-+|+++++.|...|. +++++++..-..... ....++.+..
T Consensus 117 ~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~ 195 (353)
T 3h5n_A 117 KNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIAL 195 (353)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred hCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeec
Confidence 3678999995 7899999999999995 888888764211100 0113445555
Q ss_pred cccchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHH-HHHHHHHHHHhCCCCeEEEeec
Q 017290 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTM-ISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 77 dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~-~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
+++....+.. ++++|+||.+.. |.. .-..+-++|.+.++ .+|+.+.
T Consensus 196 ~i~~~~~~~~-~~~~DlVvd~~D------------------n~~~~r~~ln~~c~~~~~-p~i~~~~ 242 (353)
T 3h5n_A 196 NINDYTDLHK-VPEADIWVVSAD------------------HPFNLINWVNKYCVRANQ-PYINAGY 242 (353)
T ss_dssp CCCSGGGGGG-SCCCSEEEECCC------------------CSTTHHHHHHHHHHHTTC-CEEEEEE
T ss_pred ccCchhhhhH-hccCCEEEEecC------------------ChHHHHHHHHHHHHHhCC-CEEEEEE
Confidence 6655544666 889999999864 222 22345578899987 4666554
|
| >1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0017 Score=60.41 Aligned_cols=72 Identities=11% Similarity=0.119 Sum_probs=46.5
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEE-----------ecccchhhHhhhccCCCEEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL-----------VDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~-----------~dl~~~~~~~~~~~~~d~vi 95 (374)
|+|.|+| .|++|..++..|.+ ||+|++++|++.+.......+..+.. +.+....+..+.++++|+||
T Consensus 1 MkI~VIG-~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvi 78 (402)
T 1dlj_A 1 MKIAVAG-SGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVI 78 (402)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEE
Confidence 6899998 59999999999999 99999999986543222211111100 01111122334556789999
Q ss_pred Ecccc
Q 017290 96 NLAAD 100 (374)
Q Consensus 96 ~~a~~ 100 (374)
-+...
T Consensus 79 iavpt 83 (402)
T 1dlj_A 79 IATPT 83 (402)
T ss_dssp ECCCC
T ss_pred EecCC
Confidence 98763
|
| >4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.014 Score=53.38 Aligned_cols=71 Identities=21% Similarity=0.268 Sum_probs=51.6
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecc-cchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDL-RVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl-~~~~~~~~~~~~~d~vi~~a~ 99 (374)
||+|+|+| +|..|..++..+.+.|++|++++.++........ -+++..|. .+.+.+....+++|.|+-..+
T Consensus 1 MK~I~ilG-gg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~a--D~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 72 (363)
T 4ffl_A 1 MKTICLVG-GKLQGFEAAYLSKKAGMKVVLVDKNPQALIRNYA--DEFYCFDVIKEPEKLLELSKRVDAVLPVNE 72 (363)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTTS--SEEEECCTTTCHHHHHHHHTSSSEEEECCC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCChhHhhC--CEEEECCCCcCHHHHHHHhcCCCEEEECCC
Confidence 78999999 6899999999999999999999987654332211 13444554 355666666679998876544
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0028 Score=58.11 Aligned_cols=74 Identities=14% Similarity=0.007 Sum_probs=52.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccch-hhHhhhccCCCEEEEcccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVM-DNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~-~~~~~~~~~~d~vi~~a~~ 100 (374)
...+|||+|+ |-+|..+++.+...|.+|+++++++.+.......+...+ .|..+. +....+..++|+||++++.
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v-~~~~~~~~~~~~~~~~~D~vid~~g~ 253 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHY-IATLEEGDWGEKYFDTFDLIVVCASS 253 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEE-EEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEE-EcCcCchHHHHHhhcCCCEEEECCCC
Confidence 5689999999 999999999888889999999988765433333333322 344443 3333333589999999984
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0043 Score=55.43 Aligned_cols=78 Identities=17% Similarity=0.046 Sum_probs=53.3
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCc---ccccc-----cccceeEEecccchhhHhhhccCCC
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNE---HMTED-----MFCHEFHLVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~~~~-----~~~i~~~~~dl~~~~~~~~~~~~~d 92 (374)
.....+++||+|+ |-+|+.++..|.+.|. +|+++.|++++ ..... ..+..+...++.+.+.+.+.+.++|
T Consensus 144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~D 222 (312)
T 3t4e_A 144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASAD 222 (312)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCS
T ss_pred CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCce
Confidence 4557799999996 8899999999999997 89999998432 11110 0112233344444333455667899
Q ss_pred EEEEcccc
Q 017290 93 HVFNLAAD 100 (374)
Q Consensus 93 ~vi~~a~~ 100 (374)
+||++...
T Consensus 223 iIINaTp~ 230 (312)
T 3t4e_A 223 ILTNGTKV 230 (312)
T ss_dssp EEEECSST
T ss_pred EEEECCcC
Confidence 99998764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 374 | ||||
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 1e-108 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 1e-70 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 6e-56 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-55 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 8e-53 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 8e-48 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 5e-41 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 5e-40 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 1e-39 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 3e-39 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 5e-38 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-35 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 6e-35 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 3e-32 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 2e-30 | |
| d1gy8a_ | 383 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 1e-28 | |
| d2blla1 | 342 | c.2.1.2 (A:316-657) Polymyxin resistance protein A | 2e-20 | |
| d1eq2a_ | 307 | c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer | 6e-17 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 5e-16 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 1e-15 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 3e-15 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 2e-14 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 3e-14 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 5e-13 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 5e-11 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 8e-11 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 6e-09 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 2e-07 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 8e-06 | |
| d5mdha1 | 154 | c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus s | 1e-05 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 5e-05 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 1e-04 | |
| d1dhra_ | 236 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 4e-04 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 5e-04 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 7e-04 | |
| d1y7ta1 | 154 | c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus th | 0.001 | |
| d7mdha1 | 175 | c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum ( | 0.001 | |
| d1luaa1 | 191 | c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter | 0.002 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 0.003 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 0.004 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 0.004 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 0.004 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 0.004 | |
| d1fjha_ | 257 | c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase | 0.004 |
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 319 bits (817), Expect = e-108
Identities = 326/363 (89%), Positives = 349/363 (96%), Gaps = 2/363 (0%)
Query: 12 TYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCH 71
TY+ELERE YWPSE L+IS+TGAGGFIASHIARRLK EGHY+IASDWKKNEHMTEDMFC
Sbjct: 1 TYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCD 60
Query: 72 EFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRI 131
EFHLVDLRVM+NCLKVT+GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNM+EA+RI
Sbjct: 61 EFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARI 120
Query: 132 SGVKRFFYASSACIYPEFKQLE-TNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF 190
+G+KRFFYASSACIYPEFKQLE TNVSLKESDAWPAEPQDA+GLEKLA+EELCKHY KDF
Sbjct: 121 NGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF 180
Query: 191 GIECRVGRFHNIYGPFGTWKGMEKA-PAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249
GIECR+GRFHNIYGPFGTWKG + PAAFCRKA TSTD+FEMWGDGLQTRSFTFIDECV
Sbjct: 181 GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECV 240
Query: 250 EGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTL 309
EGVLRLTKSDFREPVNIGSDEMVSMNEMAE+VLSFE+KKLPIHHIPGPEGVRGRNSDN L
Sbjct: 241 EGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNL 300
Query: 310 IKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGTQAPVQLGSLRA 369
IKEKLGWAP+M+LK+GLRITYFWIKEQIEKEK +G D+S+YGSSKVVGTQAPVQLGSLRA
Sbjct: 301 IKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYGSSKVVGTQAPVQLGSLRA 360
Query: 370 ADG 372
ADG
Sbjct: 361 ADG 363
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 221 bits (564), Expect = 1e-70
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 6/314 (1%)
Query: 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL 85
+ RI +TG GF+ SH+ +L +GH + D +L D
Sbjct: 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 60
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
+ VD +++LA+ ++ + + NT+ + NML ++ G R AS++ +
Sbjct: 61 PLYIEVDQIYHLASPASPPNYMYNPIKTL-KTNTIGTLNMLGLAKRVGA-RLLLASTSEV 118
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
Y + + + P P+ Y K +E +C Y K G+E RV R N +GP
Sbjct: 119 YGDPEVHPQSEDYW-GHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGP 177
Query: 206 FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVN 265
+ + F +AL + ++G G QTR+F ++ + V G++ L S+ PVN
Sbjct: 178 -RMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVN 235
Query: 266 IGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGWAPSMKLKD 324
+G+ E ++ E A+++ + I + + + R D K LGW P + L++
Sbjct: 236 LGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEE 295
Query: 325 GLRITYFWIKEQIE 338
GL + ++++E
Sbjct: 296 GLNKAIHYFRKELE 309
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 183 bits (466), Expect = 6e-56
Identities = 68/326 (20%), Positives = 125/326 (38%), Gaps = 30/326 (9%)
Query: 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL 85
K R+ + G G + S I R+L+ G + + +L+D R + +
Sbjct: 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE-----------LNLLDSRAVHDFF 50
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
+ +D V+ AA +GG+ + + +Y N MI N++ A+ + V + + S+CI
Sbjct: 51 ASER-IDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCI 109
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
YP+ + S + Y + K+A +LC+ Y + +G + R N+YGP
Sbjct: 110 YPKLAKQPMAESELLQG-TLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGP 168
Query: 206 FGTWKGMEKAPAAF-----CRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR------ 254
+ +WG G R F +D+ +
Sbjct: 169 HDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAH 228
Query: 255 ----LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PEGVRGRNSDNTL 309
+N+G+ ++ E+A+ + K + P+G + D T
Sbjct: 229 EVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTR 288
Query: 310 IKEKLGWAPSMKLKDGLRITYFWIKE 335
+ + LGW + L+ GL TY W E
Sbjct: 289 LHQ-LGWYHEISLEAGLASTYQWFLE 313
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 183 bits (465), Expect = 1e-55
Identities = 74/323 (22%), Positives = 124/323 (38%), Gaps = 26/323 (8%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD------------WKKNEHMTEDMFCHEFHL 75
R+ VTG GFI SH R+L + + + +D + N + F
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61
Query: 76 VDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135
D+R + +GVD + + A + + SV N + +L+ + +GV
Sbjct: 62 GDIRDAGLLARELRGVDAIVHFA-AESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
R + S+ +Y + S ES P EP Y K S+ + + Y + +G++ R
Sbjct: 121 RVVHVSTNQVYGSID----SGSWTESS--PLEPNSPYAASKAGSDLVARAYHRTYGLDVR 174
Query: 196 VGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR- 254
+ R N YGP ++ EK F L ++GDG R + D+ G+
Sbjct: 175 ITRCCNNYGP---YQHPEKLIPLFVTNLLDG-GTLPLYGDGANVREWVHTDDHCRGIALV 230
Query: 255 LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG--PEGVRGRNSDNTLIKE 312
L E +IG ++ E+ I+L + D I+
Sbjct: 231 LAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIER 290
Query: 313 KLGWAPSMKLKDGLRITYFWIKE 335
+LG+ P + DGL T W +E
Sbjct: 291 ELGYRPQVSFADGLARTVRWYRE 313
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 176 bits (448), Expect = 8e-53
Identities = 60/340 (17%), Positives = 119/340 (35%), Gaps = 37/340 (10%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIA-------SDWKKNEHMTEDMFCHEFHLVDLRV 80
+I +TG GFI S + R + + + ++ + + F D+
Sbjct: 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD 61
Query: 81 MDNCLKVTKG--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK--- 135
++ + D V +LAA+ + + + + N + ++ +LE +R
Sbjct: 62 SAEITRIFEQYQPDAVMHLAAE-SHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120
Query: 136 ------RFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKH 185
RF + S+ +Y + + + + P Y K +S+ L +
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180
Query: 186 YTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245
+ + +G+ V N YGP + EK AL ++G G Q R + ++
Sbjct: 181 WRRTYGLPTIVTNCSNNYGP---YHFPEKLIPLVILNALEG-KPLPIYGKGDQIRDWLYV 236
Query: 246 DECVEGVLR-LTKSDFREPVNIGSDEMVSMNEMAEIVLSFE--------DKKLPIHHIPG 296
++ + +T+ E NIG ++ + + I ++
Sbjct: 237 EDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVAD 296
Query: 297 -PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKE 335
P R D I +LGW P + G+R T W
Sbjct: 297 RPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLA 336
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 163 bits (414), Expect = 8e-48
Identities = 64/358 (17%), Positives = 123/358 (34%), Gaps = 55/358 (15%)
Query: 31 VTGAGGFIASHIARRLKSEGHYII-------ASDWKKNEHMTEDMFCH----EFHLVDLR 79
+TG G S++A L +G+ + + + ++ +H+ +D H DL
Sbjct: 6 ITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLS 65
Query: 80 VMDNCLKVTKG--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-- 135
N ++ + D V+NL A M + + + M + +LEA R G++
Sbjct: 66 DTSNLTRILREVQPDEVYNLGA-MSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKK 124
Query: 136 -RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
RF+ AS++ +Y + + KE+ P P+ Y + KL + + +Y + +G+
Sbjct: 125 TRFYQASTSELYGLVQ----EIPQKETT--PFYPRSPYAVAKLYAYWITVNYRESYGMYA 178
Query: 195 RVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 254
G N P + + + G+ R + + V+
Sbjct: 179 CNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWM 238
Query: 255 LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG------------------ 296
+ + + E I + S+ + E+ + KL
Sbjct: 239 MLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVK 298
Query: 297 --------------PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKE 340
P V D T EKLGW P + L++ + E +K
Sbjct: 299 PGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKH 356
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 145 bits (366), Expect = 5e-41
Identities = 70/343 (20%), Positives = 132/343 (38%), Gaps = 29/343 (8%)
Query: 13 YEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASD-----------WKKN 61
YEEL +E P++ +TG GFI S++ L ++ D ++
Sbjct: 5 YEELRKE--LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRS 62
Query: 62 EHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI 121
+ +F D+R +D+C GVD+V + A +G + ++ N
Sbjct: 63 LVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQA-ALGSVPRSINDPITSNATNIDG 121
Query: 122 SFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEE 181
NML A+R + V+ F YA+S+ Y + + L + + +P Y + K +E
Sbjct: 122 FLNMLIAARDAKVQSFTYAASSSTYGD------HPGLPKVEDTIGKPLSPYAVTKYVNEL 175
Query: 182 LCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRS 241
+++ +G R+ N++G G A ++ D + GDG +R
Sbjct: 176 YADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRD 235
Query: 242 FTFIDECVEG---VLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKK------LPIH 292
F +I+ V+ + NI S+N++ + + P++
Sbjct: 236 FCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVY 295
Query: 293 HIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKE 335
VR +D + + LG+AP + G+ + W
Sbjct: 296 RDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIM 338
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 142 bits (359), Expect = 5e-40
Identities = 63/338 (18%), Positives = 114/338 (33%), Gaps = 38/338 (11%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD---------WKKNEHMTEDMFCHEFHLVDL 78
R+ VTG G+I SH +L GH +I D E + F D+
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHP--TFVEGDI 59
Query: 79 RVMDNCLKVTK--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKR 136
R ++ +D V + A + +G NN + ++ A R + VK
Sbjct: 60 RNEALMTEILHDHAIDTVIHFAG-LKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKN 118
Query: 137 FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKH-YTKDFGIECR 195
F ++SSA +Y + ++ PQ YG KL E++
Sbjct: 119 FIFSSSATVYGDQPKIPYV-----ESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIA 173
Query: 196 VGRFHNIYGPFGTWKG-------MEKAPAAFCRKALTSTDKFEMWG------DGLQTRSF 242
+ R+ N G + + A+ D ++G DG R +
Sbjct: 174 LLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY 233
Query: 243 TFIDECVEGVLRLTKSDFR----EPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE 298
+ + +G + + N+G+ S+ ++ K + H P E
Sbjct: 234 IHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRRE 293
Query: 299 G-VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKE 335
G + +D + +L W + L + + T+ W
Sbjct: 294 GDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSR 331
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 142 bits (357), Expect = 1e-39
Identities = 59/350 (16%), Positives = 123/350 (35%), Gaps = 47/350 (13%)
Query: 31 VTGAGGFIASHIARRLKSEGHYII-------ASDWKKNEHMTEDMFCH-----EFHLVDL 78
+TG G S++A L +G+ + + + + EH+ ++ H + H DL
Sbjct: 6 ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDL 65
Query: 79 RVMDNCLKVTKGVDHVFNLAAD-MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV--- 134
+K+ V + + + + +L+A + G+
Sbjct: 66 TDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINS 125
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
+F+ AS++ +Y + + + KE+ P P+ YG KL + + ++ + + +
Sbjct: 126 VKFYQASTSELYGKVQ----EIPQKETT--PFYPRSPYGAAKLYAYWIVVNFREAYNLFA 179
Query: 195 RVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 254
G N P + + + K + G+ R + + VE +
Sbjct: 180 VNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWL 239
Query: 255 LTKSDFREPVNIGSDEMVSMNEMA-------------------EIVLSFEDKKLPIHHIP 295
+ ++D E I + E+ S+ E E+ E K+ +
Sbjct: 240 MLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDL 299
Query: 296 G---PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKT 342
P V D T K+KL W P + + +R + +E +T
Sbjct: 300 KYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREM---VHADVELMRT 346
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 140 bits (354), Expect = 3e-39
Identities = 67/342 (19%), Positives = 119/342 (34%), Gaps = 40/342 (11%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASD---------WKKNEHMTEDMFCHEFHLVDLR 79
+ VTG G+I SH L G+ + +D + E +T+ F+ VDL
Sbjct: 4 VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHI--PFYEVDLC 61
Query: 80 VMDNCLKVTK--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRF 137
KV K +D V + A + +G +NN + + +LE + V +F
Sbjct: 62 DRKGLEKVFKEYKIDSVIHFAG-LKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKF 120
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++SSA +Y + + + + E P P + YG K A E + +
Sbjct: 121 VFSSSATVYGDATRFPNMIPIPEE--CPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFA 178
Query: 198 --RFHNIYGPFGTWKGME-------KAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 248
R+ N G + E + A+ +K ++GD +R T I +
Sbjct: 179 ILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDY 238
Query: 249 VEGVLRLTKSDFREP--------------VNIGSDEMVSMNEMAEIVLSFEDKKLPIHHI 294
+ V N+GS + ++ E+ LP
Sbjct: 239 IHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVT 298
Query: 295 PGPEG-VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKE 335
G V + K +L W ++++D + + W E
Sbjct: 299 GRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTE 340
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 137 bits (344), Expect = 5e-38
Identities = 50/325 (15%), Positives = 102/325 (31%), Gaps = 17/325 (5%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIA------SDWKKNEHMTEDMFCHEFHLVDLRVM 81
VTG G +++A+ L +G+ + SD + ++ D+
Sbjct: 2 SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA 61
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYA 140
+ + N V + + ++LEA R + FY
Sbjct: 62 CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121
Query: 141 SSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFH 200
+S Q E + P P+ YG+ KL + +Y + FG+ G
Sbjct: 122 ASTSEMFGLIQAERQ-----DENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILF 176
Query: 201 NIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF 260
N P + + + + + G+ R + F + VE + + + D
Sbjct: 177 NHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK 236
Query: 261 REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-----VRGRNSDNTLIKEKLG 315
+ + + ++ +M +I P V + + LG
Sbjct: 237 ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLG 296
Query: 316 WAPSMKLKDGLRITYFWIKEQIEKE 340
W P L + +R+ ++ +E
Sbjct: 297 WKPRTSLDELIRMMVEADLRRVSRE 321
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 131 bits (329), Expect = 1e-35
Identities = 69/350 (19%), Positives = 137/350 (39%), Gaps = 29/350 (8%)
Query: 28 RISVTGAGGFIASHIARRLKSEGH---------YIIASDWKKNEHMTEDMFCHEFHLVDL 78
I VTG GFI S+ + + A + E + D E + D+
Sbjct: 4 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRV--ELVVGDI 61
Query: 79 RVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138
+ K+ D + + AA+ + + S ++ N + ++ +LEA+R ++ F
Sbjct: 62 ADAELVDKLAAKADAIVHYAAESHNDNSLN-DPSPFIHTNFIGTYTLLEAARKYDIR-FH 119
Query: 139 YASSACIYPEFKQLET------NVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGI 192
+ S+ +Y + E K + P Y K AS+ + K + + FG+
Sbjct: 120 HVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGV 179
Query: 193 ECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV 252
+ + N YGP+ + K +++G+G R + ++ GV
Sbjct: 180 KATISNCSNNYGPYQHIEKFIPRQITNILAG----IKPKLYGEGKNVRDWIHTNDHSTGV 235
Query: 253 LRL-TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDK-KLPIHHIPGPEG-VRGRNSDNTL 309
+ TK E IG+D + E+ E++L + K H+ G D +
Sbjct: 236 WAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASK 295
Query: 310 IKEKLGWAPSM-KLKDGLRITYFWIKEQIE--KEKTQGIDLSVYGSSKVV 356
++++LGW P +GL T W + + K + + ++ + + +V+
Sbjct: 296 LRDELGWTPQFTDFSEGLEETIQWYTDNQDWWKAEKEAVEANYAKTQEVI 345
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 129 bits (323), Expect = 6e-35
Identities = 64/336 (19%), Positives = 123/336 (36%), Gaps = 30/336 (8%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD------WKKNEHMTEDMFCHEFHLVDLRVM 81
++ +TG GF+ S++A S+G +I D N H + EF D+R
Sbjct: 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 61
Query: 82 DNCLKVTKGV--DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFF 138
++ ++ D F+LA M N + N + N+LEA R
Sbjct: 62 NDVTRLITKYMPDSCFHLA-GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNII 120
Query: 139 YASSACIYPEFKQ----------LETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTK 188
Y+S+ +Y + +Q + ++ + YG K A+++ Y +
Sbjct: 121 YSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYAR 180
Query: 189 DFGIECRVGRFHNIYGPFGTWKGMEKAPAAFC----RKALTSTDKFEMWGDGLQTRSFTF 244
FG+ V R ++YG + FC F + G+G Q R
Sbjct: 181 IFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH 240
Query: 245 IDECVEGVLRLTKSD-----FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG 299
++ + + + +S+ E+ +++ + + + ++P E
Sbjct: 241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRES 300
Query: 300 -VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIK 334
R +D I + W+P + KDG++ Y W
Sbjct: 301 DQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTS 336
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 121 bits (304), Expect = 3e-32
Identities = 48/334 (14%), Positives = 104/334 (31%), Gaps = 20/334 (5%)
Query: 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------------DMFCHEF 73
+ +TG G S++ L +G+ + + + T+ + +
Sbjct: 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKL 60
Query: 74 HLVDLRVMDNCLKVTKGVDH-VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRIS 132
H DL + + + A + + +LEA R
Sbjct: 61 HYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH 120
Query: 133 GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGI 192
+ T E+ P P+ Y K A+ +Y + +G+
Sbjct: 121 TIDSGRTVKYYQAGSSEMFGSTPPPQSETT--PFHPRSPYAASKCAAHWYTVNYREAYGL 178
Query: 193 ECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV 252
G N P + + + G+ +R + F + VE +
Sbjct: 179 FACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAM 238
Query: 253 LRLTKSDFREPVNIGSDEMVSMNEMAE-----IVLSFEDKKLPIHHIPGPEGVRGRNSDN 307
+ + + + + ++E ++ E + + L+++D P V D
Sbjct: 239 WLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDA 298
Query: 308 TLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 341
+ KE LGW P + + +++ E ++EK
Sbjct: 299 SKAKEVLGWKPQVGFEKLVKMMVDEDLELAKREK 332
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (291), Expect = 2e-30
Identities = 64/343 (18%), Positives = 116/343 (33%), Gaps = 42/343 (12%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD---------------WKKNEHMTEDMFCHE 72
++ VTG G+I SH L G+ + D ++ + +T E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSV--E 61
Query: 73 FHLVDLR-VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRI 131
F +D+ K A + +G N + +LE +
Sbjct: 62 FEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 121
Query: 132 SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTK-DF 190
GVK ++SSA +Y + L + + YG K EE+ + + D
Sbjct: 122 HGVKNLVFSSSATVYGNPQYLPLDE-----AHPTGGCTNPYGKSKFFIEEMIRDLCQADK 176
Query: 191 GIECRVGRFHNIYGPFGTWKGMEKAP-------------AAFCRKALTSTDKFEMWGDGL 237
+ R+ N G + E A R+AL DG
Sbjct: 177 TWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT 236
Query: 238 QTRSFTFIDECVEGVLRLTKSDF----REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHH 293
R + + + +G + + N+G+ S+ +M + + KK+P
Sbjct: 237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKV 296
Query: 294 IPGPEG-VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKE 335
+ EG V ++ +L +E+LGW ++ L + W K+
Sbjct: 297 VARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQ 339
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Score = 112 bits (280), Expect = 1e-28
Identities = 52/370 (14%), Positives = 106/370 (28%), Gaps = 65/370 (17%)
Query: 28 RISVTGAGGFIASHIARRL-KSEGHYIIASD-----------------------WKKNEH 63
R+ V G G+I SH R L + H ++ D
Sbjct: 4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63
Query: 64 MTEDMFCHEFHLVDLR---VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTM 120
+ D+R ++ +D V ++ A + ++ N
Sbjct: 64 PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVG 123
Query: 121 ISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASE 180
I + K F +S+A + + P+ YG KL +E
Sbjct: 124 ILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAE 183
Query: 181 ELCKHYTKDFGIECRVGRFHNIYGPFGTW------KGMEKAPAAFCRKALT--------- 225
+ + + +GI+ R+ N G +G + ++
Sbjct: 184 RMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLT 243
Query: 226 ------STDKFEMWG------DGLQTRSFTFIDECVEGVLRLTKSDFR----------EP 263
+ + ++G DG R + + + + +
Sbjct: 244 IHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSV 303
Query: 264 VNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-VRGRNSDNTLIKEKLGWAPSMKL 322
N+G+ S+ E+ E+ +P+ EG + + +E LGW P
Sbjct: 304 FNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDT 363
Query: 323 KDGLRITYFW 332
+ + T +
Sbjct: 364 LEAIMETSWK 373
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Score = 88.9 bits (218), Expect = 2e-20
Identities = 48/338 (14%), Positives = 104/338 (30%), Gaps = 27/338 (7%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLV--DLRVMDNCL 85
R+ + G GFI +H+ RL E HY + ++ ++ + FH V D+ + +
Sbjct: 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWI 61
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
+ V + N + + + ++ + F ++S
Sbjct: 62 EYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVY 121
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFG----IECRVGRFHN 201
+ +P+ Y + K + + Y + G +
Sbjct: 122 GMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGP 181
Query: 202 IYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR 261
+ L ++ G Q R FT I + +E + R+ ++
Sbjct: 182 RLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGN 241
Query: 262 EPVN-----IGSDEMVSMNEMAEIVLSFEDKKLPIHHIP----------------GPEGV 300
+ S+ E+ E++L+ +K HH P G + V
Sbjct: 242 RCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDV 301
Query: 301 RGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIE 338
R L W P + +++ + T + ++
Sbjct: 302 EHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD 339
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Score = 78.1 bits (190), Expect = 6e-17
Identities = 48/315 (15%), Positives = 92/315 (29%), Gaps = 20/315 (6%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIA-----SDWKKNEHMTEDMFCHEFHLVDLRVMDN 83
I VTG GFI S+I + L +G I D K ++ + D +
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIM 61
Query: 84 CLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143
+ V+ +F+ A + Y + +
Sbjct: 62 AGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHY---------CLEREIPFL 112
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIY 203
ES + + L E + + + F+
Sbjct: 113 YASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYG 172
Query: 204 GPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREP 263
G M + G R F ++ + + L ++
Sbjct: 173 PREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGI 232
Query: 264 VNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGR-----NSDNTLIKEKLGWAP 318
N+G+ S +A+ L++ KK I +IP P+ ++GR +D T ++ P
Sbjct: 233 FNLGTGRAESFQAVADATLAYH-KKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKP 291
Query: 319 SMKLKDGLRITYFWI 333
+ +G+ W+
Sbjct: 292 FKTVAEGVTEYMAWL 306
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 76.0 bits (185), Expect = 5e-16
Identities = 37/280 (13%), Positives = 80/280 (28%), Gaps = 35/280 (12%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIA---SDWKKNEHMTEDMFCHEFHLVDLRVM 81
+K R+ + G G+I I S GH + N + + + L
Sbjct: 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA 61
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
DH + A I + ++ ++ + ++EA + +G + F S
Sbjct: 62 SLD-------DHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPS 114
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
+ P E G + + + I +
Sbjct: 115 EFGMDP----------------DIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNM 158
Query: 202 IYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL---TKS 258
G F + DK ++GDG + D+ ++ ++
Sbjct: 159 FAGYFAGSLAQ------LDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT 212
Query: 259 DFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE 298
+ ++S E+ +I ++ L +I +
Sbjct: 213 LNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQD 252
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 74.9 bits (182), Expect = 1e-15
Identities = 39/322 (12%), Positives = 88/322 (27%), Gaps = 22/322 (6%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIA-----SDWKKNEHMTEDMFCHEFHLVDLRVMD 82
+ VTGA GF+ASH+ +L G+ + S + + + F + M
Sbjct: 13 LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDML 72
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
+ + +A + F V+ + A+ VKRF SS
Sbjct: 73 KQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132
Query: 143 --ACIYPEFKQLETNVSLKESDAW------------PAEPQDAYGLEKLASEELCKHYTK 188
+ + P+ + K + P + Y K +E +
Sbjct: 133 TVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMD 192
Query: 189 DFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 248
+ + Y + ++ + + + + + +
Sbjct: 193 ENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDI 252
Query: 249 VEGVLRL-TKSDFREPVNIGSDEMVSMNEMAEIVLS-FEDKKLPIHHIPGPEGVRGR-NS 305
L G+ N + + K P + + +
Sbjct: 253 GLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTA 312
Query: 306 DNTLIKEKLGWAPSMKLKDGLR 327
+ I + LG +++ ++
Sbjct: 313 PSLEILKSLGRPGWRSIEESIK 334
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 74.1 bits (180), Expect = 3e-15
Identities = 35/333 (10%), Positives = 74/333 (22%), Gaps = 21/333 (6%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD-----WKKNEHMTEDMFCHEFHLVDLRVMD 82
R+ VTG GF ++ L++ G + + + D+R +
Sbjct: 10 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQN 69
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
L+ + + + + V Y+ ++ L + +
Sbjct: 70 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNI 129
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEP------QDAYGLEKLASEELCKHYTKDFGIECRV 196
+ + +P + G
Sbjct: 130 TSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVAT 189
Query: 197 GRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 256
R N+ G +++ R S ++ +L
Sbjct: 190 VRAGNVIGGGD--WALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQK 247
Query: 257 KSDFREPVNIGSDEMVSMNEMAEIVLSFE--------DKKLPIHHIPGPEGVRGRNSDNT 308
G + + + + E + P D +
Sbjct: 248 LYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCS 307
Query: 309 LIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 341
K +LGW P L L W K +
Sbjct: 308 KAKMQLGWHPRWNLNTTLEYIVGWHKNWLSGTD 340
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.3 bits (168), Expect = 2e-14
Identities = 19/140 (13%), Positives = 43/140 (30%), Gaps = 8/140 (5%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
+I++ GA G + G+ + + +E + D+ + K
Sbjct: 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKT 64
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147
G D V L + + + N++ A + GV + +SA +
Sbjct: 65 VAGQDAVIVLLGTRNDLSP--------TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLW 116
Query: 148 EFKQLETNVSLKESDAWPAE 167
+ ++ + D
Sbjct: 117 DPTKVPPRLQAVTDDHIRMH 136
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 70.2 bits (170), Expect = 3e-14
Identities = 36/313 (11%), Positives = 86/313 (27%), Gaps = 41/313 (13%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
+I +TGA G + I ++LK + +I +D + + + ++ ++
Sbjct: 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------DLDITNVLAVNKFFNE 50
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147
K + V N AA + N A +
Sbjct: 51 KK-PNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGE 109
Query: 148 EFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFG 207
+ + + A+ + +++ K + + R +YG
Sbjct: 110 AKEPITEFDEVNPQSAYGKTKLE------------GENFVKALNPKYYIVRTAWLYGDGN 157
Query: 208 TWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIG 267
+ E+ Q + T + VL++ +
Sbjct: 158 NF---------VKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKNYGTFHCT 208
Query: 268 SDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE----GVRGRNS--DNTLIKEKLGWAPSMK 321
+ S + A + + + E R + S N +++ G +
Sbjct: 209 CKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-E 267
Query: 322 LKDGLRITYFWIK 334
K+ L+ ++
Sbjct: 268 WKESLKEYIDLLQ 280
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 66.7 bits (161), Expect = 5e-13
Identities = 31/277 (11%), Positives = 66/277 (23%), Gaps = 28/277 (10%)
Query: 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL 85
+ RI + GA G+I H+A+ GH + +
Sbjct: 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA----- 57
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
+ G + + + S + N+++A + G + F+ S
Sbjct: 58 NIVHGSIDDHASLVEA--VKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGN 115
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
+ + + GI + G
Sbjct: 116 D-----------------VDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGY 158
Query: 206 FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVN 265
F A + I + ++ +
Sbjct: 159 FLRSLAQ----AGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYL 214
Query: 266 IGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRG 302
+S+NE+ + DK L ++P E ++
Sbjct: 215 RLPANTLSLNELVALWEKKIDKTLEKAYVPEEEVLKL 251
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 61.1 bits (146), Expect = 5e-11
Identities = 46/374 (12%), Positives = 95/374 (25%), Gaps = 61/374 (16%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCH---------------- 71
R+ V G G+ A L + + + D +
Sbjct: 3 RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 62
Query: 72 -------EFHLVDLRVMDNCLKVTKGVD----HVFNLAADMGGMGFIQSNHSVIMYNNTM 120
E ++ D+ + + K + F +S +NN +
Sbjct: 63 ALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVI 122
Query: 121 ISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLK--------ESDAWPAEPQDAY 172
+ N+L A + G + ++ ++ +P + Y
Sbjct: 123 GTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFY 182
Query: 173 GLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEM 232
L K+ K +GI +YG M +
Sbjct: 183 HLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNR 242
Query: 233 WGDGLQTRSFTFI--------------DECVEGVLRLTKSDFREPVNI--GSDEMVSMNE 276
+ + D + + + E S+NE
Sbjct: 243 FCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNE 302
Query: 277 MAEIVLSFEDK---KLPIHHIPGPEG---VRGRNSDNTLIKEKLGWAPSMKLKDGLRITY 330
+A +V K + +P P N+ +T + E LG P L
Sbjct: 303 LASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLME-LGLEPHYLSDSLLDSLL 361
Query: 331 FWI---KEQIEKEK 341
+ K++++ ++
Sbjct: 362 NFAVQFKDRVDTKQ 375
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 59.5 bits (142), Expect = 8e-11
Identities = 32/259 (12%), Positives = 67/259 (25%), Gaps = 25/259 (9%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCH-EFHLVDLRVMDNCLK 86
+ VTGA G + ++LK +A ++ E + + + D+ D+
Sbjct: 5 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINP 64
Query: 87 VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146
+G+D + L + + M E G K A+
Sbjct: 65 AFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGV 124
Query: 147 PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPF 206
+ + L + + Y D G + R +
Sbjct: 125 KHIVVVGSMGGTNPDHPLNKLGNGNI----LVWKRKAEQYLADSGTPYTIIRAGGLLDKE 180
Query: 207 GTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FREPV 264
G R+ L D + D + E ++ + +
Sbjct: 181 GGV-----------RELLVGKDDELLQTD----TKTVPRADVAEVCIQALLFEEAKNKAF 225
Query: 265 NIGSDE---MVSMNEMAEI 280
++GS + +
Sbjct: 226 DLGSKPEGTSTPTKDFKAL 244
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 54.7 bits (130), Expect = 6e-09
Identities = 27/271 (9%), Positives = 70/271 (25%), Gaps = 28/271 (10%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNC 84
+K I+V GA G + + R + GH++ A + V L
Sbjct: 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQV--HSLKGLIAEELQAIPNVTLFQGPLL 59
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144
++V + G N + + I ++ +A++ +G + + SS
Sbjct: 60 -------NNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP 112
Query: 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
+ + +Y + G+
Sbjct: 113 DHSLYGPWPAVPMWAPKFTVE-------------------NYVRQLGLPSTFVYAGIYNN 153
Query: 205 PFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPV 264
F + F+ + + + + + +
Sbjct: 154 NFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHR 213
Query: 265 NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP 295
+ E +S ++ ++++ +P
Sbjct: 214 IALTFETLSPVQVCAAFSRALNRRVTYVQVP 244
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 49.9 bits (117), Expect = 2e-07
Identities = 33/308 (10%), Positives = 68/308 (22%), Gaps = 30/308 (9%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
I + G G + + R L G+ I K D +
Sbjct: 2 NILLFGKTGQVGWELQRSLAPVGNLIALDVHSK------------EFCGDFSNPKGVAET 49
Query: 88 TKGV--DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
+ + D + N AA + N T + A+ +
Sbjct: 50 VRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFP 109
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
+ + P + YG KLA E+ + I + G
Sbjct: 110 GTG--------DIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAG-KGN 160
Query: 206 FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVN 265
+ A + + L + I +
Sbjct: 161 NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGT 220
Query: 266 IGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE----GVRGRNS--DNTLIKEKLGWAPS 319
+ ++ ++ +P R NS + +
Sbjct: 221 TTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILP 280
Query: 320 MKLKDGLR 327
+ + G++
Sbjct: 281 -QWELGVK 287
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 44.4 bits (105), Expect = 8e-06
Identities = 28/170 (16%), Positives = 45/170 (26%), Gaps = 21/170 (12%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDL-------RVMDN 83
VTG I IA+ EG + D + + F VDL R ++
Sbjct: 10 VTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEE 69
Query: 84 CLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143
VD + N AA + ++ N + + S+
Sbjct: 70 AAYALGRVDVLVNNAAIAAPGSALTVRLPEW---RRVLEVN---------LTAPMHLSAL 117
Query: 144 CIYPEFKQLETNVSLKESDA--WPAEPQDAYGLEKLASEELCKHYTKDFG 191
K + S + + AY K L + D
Sbjct: 118 AAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLA 167
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 154 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 43.1 bits (101), Expect = 1e-05
Identities = 21/116 (18%), Positives = 39/116 (33%), Gaps = 16/116 (13%)
Query: 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDN 83
SE +R+ VTGA G IA + + + + L+D+
Sbjct: 1 SEPIRVLVTGAAGQIAYSLLYSIGNGS-------------VFGKDQPIILVLLDI---TP 44
Query: 84 CLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFY 139
+ V GV A I ++ I + + ++ + R G++R
Sbjct: 45 MMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDL 100
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 41.7 bits (96), Expect = 5e-05
Identities = 19/148 (12%), Positives = 35/148 (23%), Gaps = 2/148 (1%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHY--IIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL 85
R+ + GA G H+ R+ SE +IA K L +D +
Sbjct: 4 RVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSI 63
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
A + + +S + +S
Sbjct: 64 DTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYN 123
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYG 173
+ + + A P +G
Sbjct: 124 RVKGELEQALQEQGWPQLTIARPSLLFG 151
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.9 bits (94), Expect = 1e-04
Identities = 31/250 (12%), Positives = 62/250 (24%), Gaps = 39/250 (15%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHY--IIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL 85
+ + GA G + + + +G + + +K E +VD +D+
Sbjct: 16 SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYA 75
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
+G D F G ++ + + E ++ G K F SS
Sbjct: 76 SAFQGHDVGFC----CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKG- 130
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
Y K E + D R G +
Sbjct: 131 ------------------ADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPG---VLLCD 169
Query: 206 FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVN 265
+ E F F D + + V +L + +
Sbjct: 170 RQESRPGEWLVRKF----------FGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQME 219
Query: 266 I-GSDEMVSM 274
+ + + +
Sbjct: 220 LLENKAIHDL 229
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 39.4 bits (91), Expect = 4e-04
Identities = 26/200 (13%), Positives = 54/200 (27%), Gaps = 20/200 (10%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
R+ V G G + S + ++ ++ + D +NE + + + +V
Sbjct: 4 RVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEV 63
Query: 88 TK-----GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
K VD + A G +S + +S
Sbjct: 64 GKLLGDQKVDAILC-VAGGWAGGNAKSKSLFKNCDLMWKQSI----------WTSTISSH 112
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNI 202
+ ++ ++ YG+ K A +LC+ +
Sbjct: 113 LATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAV 172
Query: 203 Y-GPFGT---WKGMEKAPAA 218
T K M +A +
Sbjct: 173 LPVTLDTPMNRKSMPEADFS 192
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 39.2 bits (91), Expect = 5e-04
Identities = 39/236 (16%), Positives = 77/236 (32%), Gaps = 13/236 (5%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWKK---NEHMTEDMFCHEFHLVDLRVMDNCLK- 86
+TG + + R +EG + D E T+ + D+R +++ +
Sbjct: 10 ITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQA 69
Query: 87 VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146
++ V + + G + +++ + E I+ VK + +A AC+
Sbjct: 70 ASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHIN-VKGYIHAVKACL- 127
Query: 147 PEFKQLETNVSLKESDA--WPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
P NV S+A +P Y K A L + + RV N G
Sbjct: 128 PALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYVRV----NGVG 183
Query: 205 PFGTWKGM-EKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD 259
G + + KA+++ +M L ++E +
Sbjct: 184 SGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRG 239
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 38.5 bits (89), Expect = 7e-04
Identities = 31/200 (15%), Positives = 62/200 (31%), Gaps = 22/200 (11%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLR-VMDNCLKVTK 89
V A I +A L EG + +NE + + H + + DLR +D + K
Sbjct: 9 VLAASRGIGRAVADVLSQEGAEVTICA--RNEELLKRS-GHRYVVCDLRKDLDLLFEKVK 65
Query: 90 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEF 149
VD + A F + + + NM++ R +
Sbjct: 66 EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITS 125
Query: 150 KQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPF 206
S P E ++A K + + +GI + + +
Sbjct: 126 F----------SVISPIENLYTSNSARMALTGFLKTLSFEVAPYGI-----TVNCVAPGW 170
Query: 207 GTWKGMEKAPAAFCRKALTS 226
+ +++ + +K + S
Sbjct: 171 TETERVKELLSEEKKKQVES 190
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 154 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 36.6 bits (84), Expect = 0.001
Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 12/94 (12%)
Query: 24 SEKLRISVTGAGGFIASHIARRLKSEGH-----------YIIASDWKKNEHMTEDM-FCH 71
+R++VTGA G I + R+ + I K E + ++ C
Sbjct: 2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA 61
Query: 72 EFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMG 105
L L D+ K D+ + A G
Sbjct: 62 FPLLAGLEATDDPKVAFKDADYALLVGAAPRKAG 95
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} Length = 175 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Score = 36.9 bits (85), Expect = 0.001
Identities = 18/129 (13%), Positives = 46/129 (35%), Gaps = 21/129 (16%)
Query: 10 AYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMF 69
Y + ++ W + + I+V+GA G I++H+ +L S ++F
Sbjct: 9 TYDLKAEDKTKSW-KKLVNIAVSGAAGMISNHLLFKLAS-----------------GEVF 50
Query: 70 CHEFHLVDLRVMD--NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLE 127
+ + L+++ + +GV + ++ + + +
Sbjct: 51 GQD-QPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDWALLIGA 109
Query: 128 ASRISGVKR 136
R G++R
Sbjct: 110 KPRGPGMER 118
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Score = 36.4 bits (83), Expect = 0.002
Identities = 17/120 (14%), Positives = 30/120 (25%), Gaps = 6/120 (5%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDW-----KKNEHMTEDMFCHEFHLVDLRVMD 82
+ V G + A L EG ++ + F +
Sbjct: 25 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDA 84
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
+ + KG VF A +G Q+ + +N I G+
Sbjct: 85 SRAEAVKGAHFVFTAGA-IGLELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKE 143
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 36.6 bits (84), Expect = 0.003
Identities = 28/209 (13%), Positives = 58/209 (27%), Gaps = 19/209 (9%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDL----RVMDNCLK 86
VTG I IA+RL ++GH + + + + +F E + D R +
Sbjct: 12 VTGGNRGIGLAIAQRLAADGHKVAVTH--RGSGAPKGLFGVEVDVTDSDAVDRAFTAVEE 69
Query: 87 VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146
V+ + + A ++ ++ + I+
Sbjct: 70 HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIF 129
Query: 147 PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPF 206
S+ S W Q Y K + + ++ + N+ P
Sbjct: 130 --------IGSV--SGLWGIGNQANYAASKAGVIGMARSIAREL---SKANVTANVVAPG 176
Query: 207 GTWKGMEKAPAAFCRKALTSTDKFEMWGD 235
M +A ++ + G
Sbjct: 177 YIDTDMTRALDERIQQGALQFIPAKRVGT 205
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 36.0 bits (82), Expect = 0.004
Identities = 34/243 (13%), Positives = 63/243 (25%), Gaps = 34/243 (13%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
++ V G G + S I K G+ ++ D N+ ++ + +
Sbjct: 4 KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQT 63
Query: 88 TK-----GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
VD VF A G S + + MI ++ ++ + +
Sbjct: 64 ASSLQGSQVDGVFC-VAGGWAGGSASSKDF-VKNADLMIKQSVWSSAIAAKLATTHLKPG 121
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNI 202
+ ++ + P YG+ K A L I
Sbjct: 122 GLL---------QLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTI 172
Query: 203 YGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFRE 262
P T W S+T + E +L+ T
Sbjct: 173 ------------MPVT------LDTPMNRKWMPNADHSSWTPLSFISEHLLKWTTETSSR 214
Query: 263 PVN 265
P +
Sbjct: 215 PSS 217
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 36.1 bits (83), Expect = 0.004
Identities = 31/216 (14%), Positives = 50/216 (23%), Gaps = 28/216 (12%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWKKNE-HMTEDMFCHEFHLVDL-------RVMD 82
+TGA I EG ++A D ++ + ++D+ R
Sbjct: 10 ITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFA 69
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
L +D V + A + + F A +
Sbjct: 70 EALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGS-----------FLVAKA 118
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRF 199
A K + V Q Y L + + GI RV
Sbjct: 119 ASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELGRWGI--RV--- 173
Query: 200 HNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD 235
N P M R+ + G
Sbjct: 174 -NTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGK 208
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 36.2 bits (83), Expect = 0.004
Identities = 34/209 (16%), Positives = 55/209 (26%), Gaps = 17/209 (8%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWKKN------EHMTEDMFCHEFHLVDLRVMDNC 84
VTG I I L G + + E E E + DL
Sbjct: 11 VTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTER 70
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144
K+ + V HVF+ + + + VI + + + ++ S
Sbjct: 71 DKLMQTVAHVFDGKLN----ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIA 126
Query: 145 IYPEFKQLETNVSLKESDA--WPAEPQDAYGLEKLASEELCKHYTKDFGIEC-RVGRFHN 201
NV S A Y K A ++ K ++ + RV N
Sbjct: 127 YPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRV----N 182
Query: 202 IYGPFGTWKGMEKAPAAFCRKALTSTDKF 230
P + + D F
Sbjct: 183 SVAPGVILTPLVETAIKKNPHQKEEIDNF 211
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 36.2 bits (83), Expect = 0.004
Identities = 13/84 (15%), Positives = 23/84 (27%), Gaps = 7/84 (8%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDL-------RVMDN 83
VT F A RL GH + D + + F + + +++
Sbjct: 5 VTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEA 64
Query: 84 CLKVTKGVDHVFNLAADMGGMGFI 107
VD + + I
Sbjct: 65 VTSAYGQVDVLVSNDIFAPEFQPI 88
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 36.0 bits (82), Expect = 0.004
Identities = 30/193 (15%), Positives = 56/193 (29%), Gaps = 23/193 (11%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKG 90
++G I + + L++ GH I+ D ++ + D+ E + D K +KG
Sbjct: 6 ISGCATGIGAATRKVLEAAGHQIVGID-IRDAEVIADLSTAEG--RKQAIADVLAKCSKG 62
Query: 91 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFK 150
+D + A G+G ++ N + +++A + K A+
Sbjct: 63 MDGLVLCA----GLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA 118
Query: 151 QLET---------------NVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
L A AY K + + E
Sbjct: 119 HLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSK-NALTVAVRKRAAAWGEAG 177
Query: 196 VGRFHNIYGPFGT 208
V G T
Sbjct: 178 VRLNTIAPGATET 190
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 374 | |||
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 100.0 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 100.0 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 100.0 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 100.0 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 100.0 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 100.0 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 100.0 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.97 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.96 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.96 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.95 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.93 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.92 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.91 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.8 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.78 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.77 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.76 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.76 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.76 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.76 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.75 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.75 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.75 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.75 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.74 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.73 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.73 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.73 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.73 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.72 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.72 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.72 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.72 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.72 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.71 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.71 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.71 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.7 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.7 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.7 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.69 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.69 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.69 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.69 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.68 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.68 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.68 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.68 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.67 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.67 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.66 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.66 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.66 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.66 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.65 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.65 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.64 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.64 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.63 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.63 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.63 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.6 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.6 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.59 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.57 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.55 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.54 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.53 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.53 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.5 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.46 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.46 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.45 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.44 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.33 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.31 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.28 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.27 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.2 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.99 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.73 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 98.42 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.32 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 98.25 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 98.16 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 98.15 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 98.14 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 98.09 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.09 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 98.08 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.97 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.94 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.93 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.87 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.87 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.81 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.77 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.76 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 97.75 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 97.71 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.7 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 97.69 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.69 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.68 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.67 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 97.65 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.65 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.65 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.61 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 97.58 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.56 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 97.53 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.5 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.47 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 97.45 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.45 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.41 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.4 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.39 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.38 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.37 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.37 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.36 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.36 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.36 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 97.34 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.33 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 97.32 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.3 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 97.28 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.27 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.26 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.24 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 97.22 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 97.19 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.19 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 97.17 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.14 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 97.11 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.11 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 97.08 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.04 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.01 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 96.95 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 96.95 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 96.9 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 96.86 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 96.85 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 96.85 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 96.84 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 96.83 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.78 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 96.78 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 96.78 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.77 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 96.72 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 96.72 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.65 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 96.59 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 96.46 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 96.41 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 96.37 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 96.31 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 96.31 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.29 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.24 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 96.2 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 96.14 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.06 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.04 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 96.0 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 95.96 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 95.91 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 95.87 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 95.81 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 95.76 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 95.76 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 95.76 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 95.75 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.74 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 95.73 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 95.71 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 95.67 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 95.66 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 95.64 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 95.63 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 95.62 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 95.56 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.51 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.51 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.51 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 95.5 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 95.5 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 95.5 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 95.47 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 95.34 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 95.32 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 95.31 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 95.29 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 95.28 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 95.26 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 95.25 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.22 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 95.2 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 95.08 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 95.07 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 95.02 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 95.01 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 95.0 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 94.98 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.95 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 94.92 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 94.9 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 94.84 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 94.82 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 94.74 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 94.72 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 94.71 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 94.65 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 94.58 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 94.57 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 94.47 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 94.46 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 94.39 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 94.31 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 94.16 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 94.16 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.93 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 93.86 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 93.86 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 93.79 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 93.72 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 93.69 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 93.66 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 93.59 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 93.5 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 93.2 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 93.18 | |
| d1fmta2 | 206 | Methionyl-tRNAfmet formyltransferase {Escherichia | 93.02 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 92.78 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 92.76 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 92.73 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 92.3 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 92.18 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 92.07 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 92.03 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 91.91 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 91.69 | |
| d1gado1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 91.44 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 91.38 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 91.38 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 91.13 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 91.02 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 90.9 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 90.88 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 90.65 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 90.55 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 90.09 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 89.86 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 89.73 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 89.59 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 89.32 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 89.15 | |
| d1obfo1 | 173 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.97 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 88.8 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 88.76 | |
| d1rm4a1 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.55 | |
| d1k3ta1 | 190 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.35 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 88.34 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 88.26 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 88.15 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 88.09 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 88.06 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 87.98 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 87.56 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 87.43 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 87.31 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 87.23 | |
| d3cmco1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 87.2 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 87.19 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 86.98 | |
| d1hdgo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 86.96 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 86.61 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 86.61 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 85.78 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 85.43 | |
| d1vkza2 | 90 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 84.83 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 84.58 | |
| d2b4ro1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 84.32 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 83.98 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 83.77 | |
| d1w5fa1 | 194 | Cell-division protein FtsZ {Thermotoga maritima [T | 83.59 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 83.45 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 83.43 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 82.89 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 82.88 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 82.66 | |
| d1u8fo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 82.33 | |
| d2vapa1 | 209 | Cell-division protein FtsZ {Archaeon Methanococcus | 82.32 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 82.13 | |
| d1ebfa1 | 168 | Homoserine dehydrogenase {Baker's yeast (Saccharom | 82.07 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 80.4 | |
| d2nu7a1 | 119 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 80.05 |
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=4.7e-54 Score=399.95 Aligned_cols=360 Identities=91% Similarity=1.467 Sum_probs=309.5
Q ss_pred hhhhccCCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCC
Q 017290 13 YEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d 92 (374)
+.++.++..||.+.||||||||+||||++|+++|+++||+|+++++.+...........++..+|+.+.+.+..+++++|
T Consensus 2 ~~~~~~~~~~~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 81 (363)
T d2c5aa1 2 YKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVD 81 (363)
T ss_dssp CTTCCCCCSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCS
T ss_pred hhhccccCcCCCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCC
Confidence 34678899999899999999999999999999999999999999987665544444456888999999999999999999
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCccccccc-CCCCCCCCCCCCCCc
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNV-SLKESDAWPAEPQDA 171 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~-~~~e~~~~~~~~~~~ 171 (374)
+|||+|+...........+...+..|+.++.+++++|++.++++|||+||..+|+.....+... .....+..+..|.+.
T Consensus 82 ~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~ 161 (363)
T d2c5aa1 82 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDA 161 (363)
T ss_dssp EEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSH
T ss_pred eEeecccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCH
Confidence 9999998765433334566778889999999999999999999999999999999765433221 122222236788999
Q ss_pred hHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCC-CCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHH
Q 017290 172 YGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGM-EKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE 250 (374)
Q Consensus 172 y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 250 (374)
|+.+|.++|.+++.|.+.++++++++||+.+||+.+..... ....................+++|.+.++|+|+.|++.
T Consensus 162 Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~ 241 (363)
T d2c5aa1 162 FGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVE 241 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHH
Confidence 99999999999999999999999999999999997654432 23333344444444667778899999999999999999
Q ss_pred HHHhhhccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCCCcccccchHHHHHhcCCCcCCCHHHHHHHHH
Q 017290 251 GVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITY 330 (374)
Q Consensus 251 ~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~ 330 (374)
++..+++++.+++||++++..+++.|+++++.+.+|.+.++..++.+........|++|++++|||+|+++++++|++++
T Consensus 242 ~~~~~~~~~~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~~~~~~~~~d~ska~~~LGw~p~~sleegi~~ti 321 (363)
T d2c5aa1 242 GVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITY 321 (363)
T ss_dssp HHHHHHHSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCCCCSBCEECCHHHHHHHSCCCCCCHHHHHHHHH
T ss_pred HHHHHHhCCCCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999988888888888888899999999999999999999999999
Q ss_pred HHHHHhhhhhhhcCceEEEecCCcccCCCCCcccCccccccC
Q 017290 331 FWIKEQIEKEKTQGIDLSVYGSSKVVGTQAPVQLGSLRAADG 372 (374)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (374)
+||++++.+.+.++.....|.++.....+.|+-+++.|++||
T Consensus 322 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (363)
T d2c5aa1 322 FWIKEQIEKEKAKGSDVSLYGSSKVVGTQAPVQLGSLRAADG 363 (363)
T ss_dssp HHHHHHHHHHHHHTCCGGGGGSCCCCCCCCCCCTTCCCCSCC
T ss_pred HHHHHHHHhhhcccccccccccccccccccccccCceecCCC
Confidence 999999998888888899999999999999999999999997
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-49 Score=360.19 Aligned_cols=308 Identities=25% Similarity=0.413 Sum_probs=253.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCcc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMG 105 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~ 105 (374)
.||||||||+||||++|+++|+++||+|+++++.................+|+.+.+.+..++.++|+|||||+..+. .
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~~-~ 79 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASP-P 79 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSH-H
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHcCCCEEEECcccCCc-h
Confidence 489999999999999999999999999999987544322222222344456666666677777899999999996542 2
Q ss_pred cccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCccccccc-CCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 106 FIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNV-SLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 106 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~-~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
.+..++...+++|+.++.+|+++|++.++ ++||+||.+||+.....+..+ .+.+.+ +..|.+.|+.+|..+|.+++
T Consensus 80 ~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~--~~~p~~~Y~~sK~~~E~~~~ 156 (312)
T d2b69a1 80 NYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVN--PIGPRACYDEGKRVAETMCY 156 (312)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCC--SSSTTHHHHHHHHHHHHHHH
T ss_pred hHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCC--CCCCccHHHHHHHHHHHHHH
Confidence 33456777899999999999999999987 899999999998755432211 223333 55788999999999999999
Q ss_pred HHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCCCCcE
Q 017290 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPV 264 (374)
Q Consensus 185 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~~~~~ 264 (374)
.|++.++++++++||+.+|||+.... ....++.++.+++. ++++.+++++.+.++|+|++|++++++.+++...+++|
T Consensus 157 ~~~~~~~~~~~~lR~~~vyGp~~~~~-~~~~i~~~i~~~~~-g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~~~~~~ 234 (312)
T d2b69a1 157 AYMKQEGVEVRVARIFNTFGPRMHMN-DGRVVSNFILQALQ-GEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPV 234 (312)
T ss_dssp HHHHHHCCCEEEEEECCEECTTCCTT-CCCHHHHHHHHHHH-TCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSCCSCE
T ss_pred HHHHHhCCcEEEEEeeeEECCCCCCC-CccHHHHHHHHHHc-CCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhccCCce
Confidence 99999999999999999999975432 23467777777765 67888999999999999999999999999999899999
Q ss_pred EecCCCccCHHHHHHHHHHhcCCCCCcccCCCCC-CCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHHHhhhh
Q 017290 265 NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE-GVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEK 339 (374)
Q Consensus 265 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 339 (374)
|++++..+++.++++++.+.++.+.++...+... ......+|++|++++|||+|+++++++|+++++||+++++-
T Consensus 235 n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~~~~~~ 310 (312)
T d2b69a1 235 NLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEY 310 (312)
T ss_dssp EESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHH
T ss_pred EecCCcccchhhHHHHHHHHhCCCCceEECCCCCCCCCeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999988777665433 34567789999999999999999999999999999998763
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.5e-48 Score=359.08 Aligned_cols=304 Identities=20% Similarity=0.208 Sum_probs=244.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcc-----------cccccccceeEEecccchhhHhhhcc--CCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH-----------MTEDMFCHEFHLVDLRVMDNCLKVTK--GVD 92 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d 92 (374)
.|+|||||||||||++|+++|+++||+|++++|..+.. ......+++++.+|++|.+.+.++++ ++|
T Consensus 1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (357)
T d1db3a_ 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (357)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCC
Confidence 37899999999999999999999999999999965321 11122367889999999999999997 679
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC---eEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK---RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~---~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
+|||+|+..+. .....++...+++|+.++.+|+++|++.+++ ||||+||.+|||.... .+++|++ +..|.
T Consensus 81 ~v~h~aa~~~~-~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~----~~~~E~~--~~~P~ 153 (357)
T d1db3a_ 81 EVYNLGAMSHV-AVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQE----IPQKETT--PFYPR 153 (357)
T ss_dssp EEEECCCCCTT-TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCS----SSBCTTS--CCCCC
T ss_pred EEEEeeccccc-chhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCC----CCcCCCC--CCCCC
Confidence 99999997642 2344567778999999999999999998754 7999999999986433 2688887 67899
Q ss_pred CchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHH
Q 017290 170 DAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 249 (374)
+.|+.+|+.+|.+++.|.++++++++++||+++|||..........+..++.....+......+|++++.++++|++|+|
T Consensus 154 ~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~ 233 (357)
T d1db3a_ 154 SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYV 233 (357)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHH
Confidence 99999999999999999999999999999999999965432223344555566666556566779999999999999999
Q ss_pred HHHHhhhccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCC--------------------------------CC
Q 017290 250 EGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP--------------------------------GP 297 (374)
Q Consensus 250 ~~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~--------------------------------~~ 297 (374)
++++.+++++.+++||+++++.+|+.|+++++.+.+|...+....+ .+
T Consensus 234 ~a~~~~~~~~~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 313 (357)
T d1db3a_ 234 KMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRP 313 (357)
T ss_dssp HHHHHTTSSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCC
T ss_pred HHHHHHHhCCCCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeeccccCCC
Confidence 9999999998899999999999999999999999998532211100 01
Q ss_pred CCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHHHh
Q 017290 298 EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQ 336 (374)
Q Consensus 298 ~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 336 (374)
.......+|++|++++|||+|+++++++|++++++..+.
T Consensus 314 ~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~l~~ 352 (357)
T d1db3a_ 314 AEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEA 352 (357)
T ss_dssp CC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred ccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHHH
Confidence 122334679999999999999999999999998876554
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=1.1e-47 Score=350.95 Aligned_cols=301 Identities=25% Similarity=0.346 Sum_probs=253.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEE------EEEeCCCCccc------ccccccceeEEecccchhhHhhhccCCCEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYI------IASDWKKNEHM------TEDMFCHEFHLVDLRVMDNCLKVTKGVDHV 94 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V------~~~~r~~~~~~------~~~~~~i~~~~~dl~~~~~~~~~~~~~d~v 94 (374)
|||||||||||||++|++.|+++||+| ++++....... .....+++++.+|+.+..........+|+|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v 80 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence 789999999999999999999999854 44443321111 112336789999999999888888999999
Q ss_pred EEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHH
Q 017290 95 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGL 174 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~ 174 (374)
+|+|+.... .....++...+++|+.++.+++++|++.++++|||+||.++|+..... +++|++ +..|.+.|+.
T Consensus 81 i~~a~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~----~~~E~~--~~~p~~~Y~~ 153 (322)
T d1r6da_ 81 VHFAAESHV-DRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSG----SWTESS--PLEPNSPYAA 153 (322)
T ss_dssp EECCSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSS----CBCTTS--CCCCCSHHHH
T ss_pred Eeecccccc-cccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCC----CCCCCC--CCCCCCHHHH
Confidence 999986432 233456677788999999999999999999999999999999976533 578887 7789999999
Q ss_pred hHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHh
Q 017290 175 EKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 254 (374)
Q Consensus 175 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~ 254 (374)
+|..+|.+++.+.++++++++++||+.+|||++. ...+++.++.+... ++++.+++++++.++|+|++|+|+++..
T Consensus 154 sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~---~~~~i~~~i~~~~~-~~~i~v~~~g~~~r~~i~v~D~a~ai~~ 229 (322)
T d1r6da_ 154 SKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQH---PEKLIPLFVTNLLD-GGTLPLYGDGANVREWVHTDDHCRGIAL 229 (322)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCC---TTSHHHHHHHHHHT-TCCEEEETTSCCEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCC---cCcHHHHHHHHHHc-CCCcEEecCCCeEEccEEHHHHHHHHHH
Confidence 9999999999999999999999999999999764 34567777777665 6688899999999999999999999999
Q ss_pred hhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCCccc-C-CCCCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHH
Q 017290 255 LTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHH-I-PGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYF 331 (374)
Q Consensus 255 ~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~-~-~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~ 331 (374)
+++++ .+++||+++++.+++.|+++.+.+.+|.+.+... . +.+.......+|++|+++.|||+|+++++++|+++++
T Consensus 230 ~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~eegI~~~i~ 309 (322)
T d1r6da_ 230 VLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVR 309 (322)
T ss_dssp HHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHH
T ss_pred HHhCCCCCCeeEEeecccchhHHHHHHHHHHhCCCccceeecCCCCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHH
Confidence 99987 4779999999999999999999999998865332 2 3344456678999999999999999999999999999
Q ss_pred HHHHhhh
Q 017290 332 WIKEQIE 338 (374)
Q Consensus 332 ~~~~~~~ 338 (374)
|++++..
T Consensus 310 w~~~n~~ 316 (322)
T d1r6da_ 310 WYRENRG 316 (322)
T ss_dssp HHHHCHH
T ss_pred HHHHhHH
Confidence 9998765
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=1.4e-46 Score=348.60 Aligned_cols=308 Identities=20% Similarity=0.322 Sum_probs=246.6
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEE-EEEeCCCCccc------ccccccceeEEecccchhhHhhhcc--CCCEEEEc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYI-IASDWKKNEHM------TEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNL 97 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V-~~~~r~~~~~~------~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~ 97 (374)
||||||||+||||++|+++|+++||+| +++++...... .....+++++.+|++|.+.+..+++ ++|+||||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 789999999999999999999999975 55554332111 1123467899999999999998886 69999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhCC---------CCeEEEeecccccCCCccccccc-----C-CCCCC
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG---------VKRFFYASSACIYPEFKQLETNV-----S-LKESD 162 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~---------~~~~i~~Ss~~vy~~~~~~~~~~-----~-~~e~~ 162 (374)
|+..+ ......++...+++|+.++.+++++|++.+ +++|||+||..+||.....+..+ + ..|+.
T Consensus 81 Aa~~~-~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~ 159 (361)
T d1kewa_ 81 AAESH-VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT 159 (361)
T ss_dssp CSCCC-HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred ccccc-hhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCC
Confidence 99654 223445677789999999999999998764 45899999999999765432211 1 23333
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (374)
+..|.+.|+.+|.++|.+++.|.+.++++++++||++||||.+. ...+++.++.+.+. ++++.+++++++.++|
T Consensus 160 --~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~---~~~~i~~~i~~~~~-g~~~~v~g~g~~~r~~ 233 (361)
T d1kewa_ 160 --AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHF---PEKLIPLVILNALE-GKPLPIYGKGDQIRDW 233 (361)
T ss_dssp --CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCC---TTSHHHHHHHHHHH-TCCEEEETTSCCEEEE
T ss_pred --CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCC---cCcHHHHHHHHHHc-CCCcEEeCCCCeEEeC
Confidence 56789999999999999999999999999999999999999764 34567777777765 6788888999999999
Q ss_pred eeHHHHHHHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCC--------cccCC-CCCCCcccccchHHHHH
Q 017290 243 TFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLP--------IHHIP-GPEGVRGRNSDNTLIKE 312 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~--------~~~~~-~~~~~~~~~~d~~k~~~ 312 (374)
+|++|+|+++..++++. .+++||+++++.+++.|+++.+.+.++...+ +...+ .+.......+|++|+++
T Consensus 234 i~v~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~ 313 (361)
T d1kewa_ 234 LYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISR 313 (361)
T ss_dssp EEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHH
T ss_pred EEHHHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCceeeeCHHHHHH
Confidence 99999999999999886 5789999999999999999999876643221 11111 12334556789999999
Q ss_pred hcCCCcCCCHHHHHHHHHHHHHHhhhhhh
Q 017290 313 KLGWAPSMKLKDGLRITYFWIKEQIEKEK 341 (374)
Q Consensus 313 ~lg~~p~~~~~~~l~~~~~~~~~~~~~~~ 341 (374)
+|||+|+++++++|+++++||++.....+
T Consensus 314 ~lgw~P~~~l~e~i~~ti~w~~~n~~~~~ 342 (361)
T d1kewa_ 314 ELGWKPLETFESGIRKTVEWYLANTQWVN 342 (361)
T ss_dssp HHCCCCSCCHHHHHHHHHHHHHHCHHHHH
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999988766544
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=2.9e-45 Score=337.47 Aligned_cols=306 Identities=21% Similarity=0.260 Sum_probs=253.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-----------ccccccceeEEecccchhhHhhhccCCC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-----------TEDMFCHEFHLVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~i~~~~~dl~~~~~~~~~~~~~d 92 (374)
+++|+|||||||||||++|+++|++.||+|++++|...... ......++++.+|+.|...+.....+++
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~ 93 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD 93 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence 35689999999999999999999999999999997543211 1122357889999999998888888999
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCch
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAY 172 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y 172 (374)
+|+|+++... ...+..++...+.+|+.++.+++++|.+.++++|||+||.++||..... +++|++ +..|.+.|
T Consensus 94 ~v~~~~a~~~-~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~----~~~E~~--~~~p~~~Y 166 (341)
T d1sb8a_ 94 YVLHQAALGS-VPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGL----PKVEDT--IGKPLSPY 166 (341)
T ss_dssp EEEECCSCCC-HHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCS----SBCTTC--CCCCCSHH
T ss_pred cccccccccc-ccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCC----CccCCC--CCCCCCcc
Confidence 9999998543 2234556677899999999999999999999999999999999975433 578877 77899999
Q ss_pred HHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHH
Q 017290 173 GLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG 251 (374)
Q Consensus 173 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~ 251 (374)
+.+|..+|.+++.+.+..+++++++||+.+||+...... ...++..++...+. ++++.+++++.+.++|+|++|+|.+
T Consensus 167 ~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~-g~~i~~~g~g~~~r~~i~v~D~~~a 245 (341)
T d1sb8a_ 167 AVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQ-GDDVYINGDGETSRDFCYIENTVQA 245 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHH-TCCCEEESSSCCEECCEEHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHc-CCceEEcCCCCEEEEEEEEeccchh
Confidence 999999999999999999999999999999999876554 34566677666665 6788899999999999999999999
Q ss_pred HHhhhccC---CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcc-----cCCC-CCCCcccccchHHHHHhcCCCcCCCH
Q 017290 252 VLRLTKSD---FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIH-----HIPG-PEGVRGRNSDNTLIKEKLGWAPSMKL 322 (374)
Q Consensus 252 i~~~~~~~---~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~-----~~~~-~~~~~~~~~d~~k~~~~lg~~p~~~~ 322 (374)
+..++... .+++||++++..+++.|+++.+.+.++.+.... ..+. +........|++|+++.|||+|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~p~~sl 325 (341)
T d1sb8a_ 246 NLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDV 325 (341)
T ss_dssp HHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCCH
T ss_pred hhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccccccCCCCCCcCeeeeCHHHHHHHHCCCcCCCH
Confidence 99988764 477999999999999999999999887542111 1111 22234567899999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 017290 323 KDGLRITYFWIKEQI 337 (374)
Q Consensus 323 ~~~l~~~~~~~~~~~ 337 (374)
+++|+++++||++..
T Consensus 326 ~~gi~~ti~wy~~~~ 340 (341)
T d1sb8a_ 326 SAGVALAMPWYIMFL 340 (341)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999854
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.2e-45 Score=337.84 Aligned_cols=306 Identities=21% Similarity=0.266 Sum_probs=247.6
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc--CCCEEEEc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNL 97 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~ 97 (374)
||||||||+||||++|+++|+++||+|++++|....... ....+++++.+|++|.+.+.++++ ++|+|||+
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl 80 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence 789999999999999999999999999999875432211 122368899999999999999987 89999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHH
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 177 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~ 177 (374)
|+..+ ...+..++...+++|+.++.+++++|++.+++++|++||.++|+..... +..|.+ ....|.+.|+.+|.
T Consensus 81 Aa~~~-~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~----~~~e~~-~~~~p~~~Y~~sK~ 154 (338)
T d1udca_ 81 AGLKA-VGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKI----PYVESF-PTGTPQSPYGKSKL 154 (338)
T ss_dssp CSCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSS----SBCTTS-CCCCCSSHHHHHHH
T ss_pred CCccc-hhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEcccccc----cccccc-ccCCCcchHHHHHh
Confidence 99643 2244456778899999999999999999999999999999999876542 223333 15578899999999
Q ss_pred HHHHHHHHHHhh-hCCcEEEEeeCcccCCCCCCCC-------CCCcHHHHHHHHhccCCceEeeCC------Ccccccce
Q 017290 178 ASEELCKHYTKD-FGIECRVGRFHNIYGPFGTWKG-------MEKAPAAFCRKALTSTDKFEMWGD------GLQTRSFT 243 (374)
Q Consensus 178 ~~E~~~~~~~~~-~~~~~~ilR~~~v~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i 243 (374)
.+|.++.++... .+++++++|++.+||+.+.... ...++..++........++.++|+ +.+.++|+
T Consensus 155 ~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i 234 (338)
T d1udca_ 155 MVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYI 234 (338)
T ss_dssp HHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEE
T ss_pred hhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEE
Confidence 999999977655 5799999999999998654221 123445555555555667777764 67788999
Q ss_pred eHHHHHHHHHhhhccC----CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCC-CCcccccchHHHHHhcCCCc
Q 017290 244 FIDECVEGVLRLTKSD----FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE-GVRGRNSDNTLIKEKLGWAP 318 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~d~~k~~~~lg~~p 318 (374)
|+.|++.++..++... .+++||+++++++++.|+++.+.+.+|.+.++...+... ......+|++|++++|||+|
T Consensus 235 ~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgwkp 314 (338)
T d1udca_ 235 HVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRV 314 (338)
T ss_dssp EHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECCCTTCCSBCCBCCHHHHHHHCCCC
T ss_pred EEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCCCCCCCCEeeECHHHHHHHHCCCc
Confidence 9999999887766542 357899999999999999999999999988877776543 34556789999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhh
Q 017290 319 SMKLKDGLRITYFWIKEQIE 338 (374)
Q Consensus 319 ~~~~~~~l~~~~~~~~~~~~ 338 (374)
+++++++|+++++|++++.+
T Consensus 315 ~~~l~egi~~ti~w~~~~~~ 334 (338)
T d1udca_ 315 TRTLDEMAQDTWHWQSRHPQ 334 (338)
T ss_dssp CCCHHHHHHHHHHHHHHCTT
T ss_pred CCCHHHHHHHHHHHHHhchh
Confidence 99999999999999999754
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=9.4e-45 Score=334.71 Aligned_cols=306 Identities=21% Similarity=0.321 Sum_probs=249.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC--Cc-----ccccccccceeEEecccchhhHhhhccCCCEEEEc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK--NE-----HMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNL 97 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~--~~-----~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~ 97 (374)
+||+|||||||||||++|+++|+++||+|.++.+.. .. .......+++++.+|+.|.+.+.+++++++.|+|+
T Consensus 1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~ 80 (346)
T d1oc2a_ 1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY 80 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence 589999999999999999999999998766655432 11 11122346889999999999999999999999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccc--------cccCCCCCCCCCCCCC
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLE--------TNVSLKESDAWPAEPQ 169 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~--------~~~~~~e~~~~~~~~~ 169 (374)
|+.... ..+..++...+++|+.++.++++++.+.+. ++|++||..+|+.....+ ....++|++ +..|.
T Consensus 81 a~~~~~-~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~--~~~p~ 156 (346)
T d1oc2a_ 81 AAESHN-DNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAET--NYNPS 156 (346)
T ss_dssp CSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTS--CCCCC
T ss_pred hhcccc-cchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccccCC--CCCCC
Confidence 987542 234456778899999999999999999996 899999999998532211 112455555 66888
Q ss_pred CchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHH
Q 017290 170 DAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva 249 (374)
+.|+.+|..+|.+++.|.+.++++++++||+.+|||... ....+..++..... +.++.+++++.+.++|+|++|+|
T Consensus 157 s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~---~~~~~~~~i~~~~~-~~~~~i~~~g~~~r~~i~v~D~a 232 (346)
T d1oc2a_ 157 SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQH---IEKFIPRQITNILA-GIKPKLYGEGKNVRDWIHTNDHS 232 (346)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCC---TTSHHHHHHHHHHH-TCCCEEETTSCCEEECEEHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCC---ccchhHHHHHHHHc-CCceeEeCCCCccccccchhhHH
Confidence 999999999999999999999999999999999998654 34566666666555 56677889999999999999999
Q ss_pred HHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCCCCC-cccCCC-CCCCcccccchHHHHHhcCCCcCC-CHHHH
Q 017290 250 EGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLP-IHHIPG-PEGVRGRNSDNTLIKEKLGWAPSM-KLKDG 325 (374)
Q Consensus 250 ~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~-~~~~~~~~~d~~k~~~~lg~~p~~-~~~~~ 325 (374)
++++.++.++ .++.||+++++..++.++++.+.+.++.+.. +...+. +.....+.+|++|++++|||+|++ +++++
T Consensus 233 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~P~~t~l~e~ 312 (346)
T d1oc2a_ 233 TGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEG 312 (346)
T ss_dssp HHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHH
T ss_pred HHHHHHHhhcccCccccccccccccchHHHHHHHHHhCCCCcceEECCCCCCCCceeeeCHHHHHHHHCCCCcCCCHHHH
Confidence 9999998877 5788999999999999999999999987533 333332 333455678999999999999986 69999
Q ss_pred HHHHHHHHHHhhh
Q 017290 326 LRITYFWIKEQIE 338 (374)
Q Consensus 326 l~~~~~~~~~~~~ 338 (374)
|+++++||+++..
T Consensus 313 i~~ti~w~~~n~~ 325 (346)
T d1oc2a_ 313 LEETIQWYTDNQD 325 (346)
T ss_dssp HHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998766
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=1.8e-44 Score=329.32 Aligned_cols=305 Identities=17% Similarity=0.185 Sum_probs=248.6
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc--CCCEEEEcc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLA 98 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a 98 (374)
|+|||||||||||++|+++|+++||+|++++|..+..... ...+++++.+|+.|.+.+.+.+. .+++++|++
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a 80 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 80 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence 6899999999999999999999999999999976543211 23467899999999999888776 577888888
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHH
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 177 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~ 177 (374)
+... ......++...+..|+.++.+++++|++.+++ +|++.||..+|+..... .++|++ +..|.+.|+.+|.
T Consensus 81 ~~~~-~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~----~~~E~~--~~~p~~~Y~~sK~ 153 (321)
T d1rpna_ 81 AQSF-VGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAE----RQDENT--PFYPRSPYGVAKL 153 (321)
T ss_dssp SCCC-HHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSS----SBCTTS--CCCCCSHHHHHHH
T ss_pred cccc-ccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCC----CCCCCC--CccccChhHHHHH
Confidence 7543 22334456778899999999999999998855 88888999888765432 466766 7789999999999
Q ss_pred HHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhc
Q 017290 178 ASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257 (374)
Q Consensus 178 ~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~ 257 (374)
++|.+++.|...++++++++||+++|||..........+..++.+...++.+...++++++.++|+|++|+|+++..+++
T Consensus 154 ~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~ 233 (321)
T d1rpna_ 154 YGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQ 233 (321)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHh
Confidence 99999999999999999999999999996432222233455566656555666667999999999999999999999999
Q ss_pred cCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCccc-CC----CCCCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHH
Q 017290 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHH-IP----GPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332 (374)
Q Consensus 258 ~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~-~~----~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~ 332 (374)
++.++.||+++++..++.++++.+.+.++.+.+... .+ .+........|++|++++|||+|+++++++|+++++|
T Consensus 234 ~~~~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k~lG~~P~~~l~e~i~~tv~~ 313 (321)
T d1rpna_ 234 QDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEA 313 (321)
T ss_dssp SSSCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHH
T ss_pred cCCcCCceecccccceehhhhHHHHHHhCCCccceeecCCCCCCCCccCCccCCHHHHHHHHCCCcCCCHHHHHHHHHHH
Confidence 999999999999999999999999999988643221 11 1223445677999999999999999999999999999
Q ss_pred HHHhhh
Q 017290 333 IKEQIE 338 (374)
Q Consensus 333 ~~~~~~ 338 (374)
+.+...
T Consensus 314 ~l~~~~ 319 (321)
T d1rpna_ 314 DLRRVS 319 (321)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 887654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1e-43 Score=327.17 Aligned_cols=308 Identities=19% Similarity=0.254 Sum_probs=244.1
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccc-cccccceeEEecccchhhHhh-hccCCCEEEEcccccCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMT-EDMFCHEFHLVDLRVMDNCLK-VTKGVDHVFNLAADMGG 103 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-~~~~~i~~~~~dl~~~~~~~~-~~~~~d~vi~~a~~~~~ 103 (374)
|||||||||||||++|+++|+++|+ +|+++++....... ....+++++.+|+++.+.+.+ +.+++|+|||+|+....
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~ 80 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP 80 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccccc
Confidence 6899999999999999999999984 89999886543222 234568999999988766655 66789999999997542
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccC---CCCCCCCCCCCCCchHHhHHHHH
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVS---LKESDAWPAEPQDAYGLEKLASE 180 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~---~~e~~~~~~~~~~~y~~sK~~~E 180 (374)
. ....++...+..|+.++.+++++|.+.++ +++|.||..+|+........+. ..++. ...|...|+.+|..+|
T Consensus 81 ~-~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~Y~~sK~~~E 156 (342)
T d2blla1 81 I-EYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGP--VNKPRWIYSVSKQLLD 156 (342)
T ss_dssp H-HHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCC--TTCGGGHHHHHHHHHH
T ss_pred c-ccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccc--cCCCcchhhhcccchh
Confidence 2 23345567789999999999999999997 6789999999987654322111 11111 3456789999999999
Q ss_pred HHHHHHHhhhCCcEEEEeeCcccCCCCCCCC-----CCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhh
Q 017290 181 ELCKHYTKDFGIECRVGRFHNIYGPFGTWKG-----MEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255 (374)
Q Consensus 181 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~ 255 (374)
++++.+.+.++++++++|++.+||+...... ....+..++.+.+. ++++.+++++++.++|+|++|+|+++..+
T Consensus 157 ~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~g~~~r~~i~v~D~~~a~~~~ 235 (342)
T d2blla1 157 RVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE-GSPIKLIDGGKQKRCFTDIRDGIEALYRI 235 (342)
T ss_dssp HHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHH-TCCEEEGGGSCCEEECEEHHHHHHHHHHH
T ss_pred hhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHh-CCCccccCCCCeeeeecccccccceeeee
Confidence 9999999999999999999999998644332 22345666666665 67888889999999999999999999999
Q ss_pred hccC----CCCcEEecCCC-ccCHHHHHHHHHHhcCCCCCcccCCCCC----------------CCcccccchHHHHHhc
Q 017290 256 TKSD----FREPVNIGSDE-MVSMNEMAEIVLSFEDKKLPIHHIPGPE----------------GVRGRNSDNTLIKEKL 314 (374)
Q Consensus 256 ~~~~----~~~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~----------------~~~~~~~d~~k~~~~l 314 (374)
++++ .+++||+++++ .+|+.|+++.+.+.++.+......+... .......|++|++++|
T Consensus 236 ~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l 315 (342)
T d2blla1 236 IENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCL 315 (342)
T ss_dssp HHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHHHHH
T ss_pred hhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccccccccccCHHHHHHHH
Confidence 9874 36799998765 5899999999999998876655554321 1233456999999999
Q ss_pred CCCcCCCHHHHHHHHHHHHHHhhhh
Q 017290 315 GWAPSMKLKDGLRITYFWIKEQIEK 339 (374)
Q Consensus 315 g~~p~~~~~~~l~~~~~~~~~~~~~ 339 (374)
||+|+++++++|+++++||+++.+.
T Consensus 316 gw~P~~sleegl~~ti~~y~~~~~~ 340 (342)
T d2blla1 316 DWEPKIDMQETIDETLDFFLRTVDL 340 (342)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHSCT
T ss_pred CCCcCCCHHHHHHHHHHHHHhCcCC
Confidence 9999999999999999999987653
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-43 Score=326.17 Aligned_cols=303 Identities=19% Similarity=0.196 Sum_probs=242.0
Q ss_pred CeE-EEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc------------cccccceeEEecccchhhHhhhcc--CC
Q 017290 27 LRI-SVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT------------EDMFCHEFHLVDLRVMDNCLKVTK--GV 91 (374)
Q Consensus 27 ~~i-lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------------~~~~~i~~~~~dl~~~~~~~~~~~--~~ 91 (374)
||| |||||+||||++|+++|+++||+|++++|.++.... ....+++++.+|++|.+.+..++. ++
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence 578 999999999999999999999999999997642111 112357899999999999999886 78
Q ss_pred CEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCC---CeEEEeecccccCCCcccccccCCCCCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV---KRFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~---~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~ 168 (374)
++++|+++... ......+....+++|+.++.+++++|++.++ ++|||+||.+|||.... .+++|++ +..|
T Consensus 81 ~~v~~~~a~~~-~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~----~~~~E~~--~~~P 153 (347)
T d1t2aa_ 81 TEIYNLGAQSH-VKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQE----IPQKETT--PFYP 153 (347)
T ss_dssp SEEEECCSCCC-HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSS----SSBCTTS--CCCC
T ss_pred ceeeeeeeccc-cchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCC----CCCCCCC--CCCC
Confidence 89999998643 2233345566688999999999999999875 38999999999986433 2688887 7789
Q ss_pred CCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHH
Q 017290 169 QDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 248 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 248 (374)
.+.|+.+|.++|++++.|.+..+++++++||+.+|||..............+.....+..+...++++.+.++++|++|+
T Consensus 154 ~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~ 233 (347)
T d1t2aa_ 154 RSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 233 (347)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHH
Confidence 99999999999999999999999999999999999986443222222333334444456677788999999999999999
Q ss_pred HHHHHhhhccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCC----------------------CCCCcccccc
Q 017290 249 VEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG----------------------PEGVRGRNSD 306 (374)
Q Consensus 249 a~~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~----------------------~~~~~~~~~d 306 (374)
++++..++++...+.|+++.....++.+....+...++........+. +.......+|
T Consensus 234 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d 313 (347)
T d1t2aa_ 234 VEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGD 313 (347)
T ss_dssp HHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBC
T ss_pred HHHHHHHhhcCCCccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCEeeEC
Confidence 999999999988889999999999999999999988887543221110 1122345679
Q ss_pred hHHHHHhcCCCcCCCHHHHHHHHHHHHHHh
Q 017290 307 NTLIKEKLGWAPSMKLKDGLRITYFWIKEQ 336 (374)
Q Consensus 307 ~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 336 (374)
++|++++|||+|+++++++|+++++|..+.
T Consensus 314 ~skak~~Lgw~P~~sl~e~i~~~I~~~~~~ 343 (347)
T d1t2aa_ 314 CTKAKQKLNWKPRVAFDELVREMVHADVEL 343 (347)
T ss_dssp CHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCcCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999876553
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.1e-43 Score=325.82 Aligned_cols=308 Identities=20% Similarity=0.244 Sum_probs=242.5
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc--CCCEEEEc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNL 97 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~ 97 (374)
|.|||||||||||++|+++|+++||+|+++++....... ....+++++.+|++|.+.+..+++ ++|+|||+
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 81 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence 569999999999999999999999999999865433211 122367899999999999998886 89999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHH
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL 177 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~ 177 (374)
|+.... .....++.....+|+.++.+++++|++.+++|||++||.++|+.....+...+++|+. +..|.+.|+.+|.
T Consensus 82 Aa~~~~-~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~--~~~p~~~Y~~sK~ 158 (347)
T d1z45a2 82 AGLKAV-GESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEEC--PLGPTNPYGHTKY 158 (347)
T ss_dssp CSCCCH-HHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTS--CCCCCSHHHHHHH
T ss_pred cccccc-cccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCcccccc--CCCCCChhHhHHH
Confidence 997542 2334456778889999999999999999999999999999999877655555778776 7788999999999
Q ss_pred HHHHHHHHHHhh--hCCcEEEEeeCcccCCCCCCCC-------CCCcHHHHHHHHhccCCceEeeCCC------cccccc
Q 017290 178 ASEELCKHYTKD--FGIECRVGRFHNIYGPFGTWKG-------MEKAPAAFCRKALTSTDKFEMWGDG------LQTRSF 242 (374)
Q Consensus 178 ~~E~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 242 (374)
.+|.+++.+.+. .+++++++|++.+||+.+.... ...++..++......++++.+++++ ...+++
T Consensus 159 ~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~ 238 (347)
T d1z45a2 159 AIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDY 238 (347)
T ss_dssp HHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECE
T ss_pred HHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeee
Confidence 999999998754 5799999999999998643221 1234444444444445667676654 345678
Q ss_pred eeHHHHHHHHHhhhccC--------CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCC-CCCcccccchHHHHHh
Q 017290 243 TFIDECVEGVLRLTKSD--------FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP-EGVRGRNSDNTLIKEK 313 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~~--------~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-~~~~~~~~d~~k~~~~ 313 (374)
+++.|.+.+++.+++.. .+++||+++++++++.|+++.+.+.+|.+.++...+.. ........|++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~sk~~~~ 318 (347)
T d1z45a2 239 IHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTAKPDRAKRE 318 (347)
T ss_dssp EEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------CCCCCBCCHHHHHH
T ss_pred eeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCCCCCCCEeeECHHHHHHH
Confidence 88999999888877531 35789999999999999999999999998877655543 3345567899999999
Q ss_pred cCCCcCCCHHHHHHHHHHHHHHhh
Q 017290 314 LGWAPSMKLKDGLRITYFWIKEQI 337 (374)
Q Consensus 314 lg~~p~~~~~~~l~~~~~~~~~~~ 337 (374)
|||+|+++++++|+++++|++++.
T Consensus 319 lGw~p~~~lee~i~~ti~w~~~np 342 (347)
T d1z45a2 319 LKWQTELQVEDSCKDLWKWTTENP 342 (347)
T ss_dssp TCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred HCCCCCCCHHHHHHHHHHHHHhCh
Confidence 999999999999999999999873
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-43 Score=322.08 Aligned_cols=309 Identities=20% Similarity=0.242 Sum_probs=246.0
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc-------------ccccccceeEEecccchhhHhhhcc--C
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-------------TEDMFCHEFHLVDLRVMDNCLKVTK--G 90 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------------~~~~~~i~~~~~dl~~~~~~~~~~~--~ 90 (374)
.+||||||||||||++|+++|+++||+|+++++...... ......+.++.+|++|.+.+.+++. +
T Consensus 2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 81 (346)
T d1ek6a_ 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS 81 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence 479999999999999999999999999999986332211 0122357899999999999998886 6
Q ss_pred CCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~ 170 (374)
+++++|+|+..+ ......++...++.|+.++.++++++++.++++|||+||..+|+..... ..+.+.....+.+
T Consensus 82 ~~~i~h~Aa~~~-~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~-----~~~~~~~~~~~~~ 155 (346)
T d1ek6a_ 82 FMAVIHFAGLKA-VGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYL-----PLDEAHPTGGCTN 155 (346)
T ss_dssp EEEEEECCSCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSS-----SBCTTSCCCCCSS
T ss_pred cccccccccccC-cHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccc-----cccccccccccCC
Confidence 778999999654 2344456777899999999999999999999999999999999876532 1222111345778
Q ss_pred chHHhHHHHHHHHHHHHhh-hCCcEEEEeeCcccCCCCCCC------C-CCCcHHHHHHHHhccCCceEeeC------CC
Q 017290 171 AYGLEKLASEELCKHYTKD-FGIECRVGRFHNIYGPFGTWK------G-MEKAPAAFCRKALTSTDKFEMWG------DG 236 (374)
Q Consensus 171 ~y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~v~g~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~------~~ 236 (374)
+|+.+|..+|+.+..+.+. .+++++++|++.+||+..... . ....+..++......+.++.+++ ++
T Consensus 156 ~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g 235 (346)
T d1ek6a_ 156 PYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDG 235 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSS
T ss_pred hHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCC
Confidence 9999999999999998765 589999999999999865321 1 23345555565665667777655 35
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCC-CCcccccchHHHH
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE-GVRGRNSDNTLIK 311 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~d~~k~~ 311 (374)
.+.++|+|++|+|.++..++... .+++||+++++.+++.|+++.+.+.+|.+.++...+... +......|++|++
T Consensus 236 ~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~~~~e~~~~~~d~~k~~ 315 (346)
T d1ek6a_ 236 TGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQ 315 (346)
T ss_dssp SCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHHH
T ss_pred CeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCCCCCCCCEeeECHHHHH
Confidence 66789999999999988876542 457899999999999999999999999988877766543 3556678999999
Q ss_pred HhcCCCcCCCHHHHHHHHHHHHHHhhhhh
Q 017290 312 EKLGWAPSMKLKDGLRITYFWIKEQIEKE 340 (374)
Q Consensus 312 ~~lg~~p~~~~~~~l~~~~~~~~~~~~~~ 340 (374)
++|||+|+++++++|+++++||+++...+
T Consensus 316 ~~lgw~p~~slee~I~~~i~w~~~n~~~~ 344 (346)
T d1ek6a_ 316 EELGWTAALGLDRMCEDLWRWQKQNPSGF 344 (346)
T ss_dssp HTTCCCCCCCHHHHHHHHHHHHHHCTTCS
T ss_pred HHHCCCcCCCHHHHHHHHHHHHHhCHhhc
Confidence 99999999999999999999999876544
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=8.1e-43 Score=320.64 Aligned_cols=308 Identities=17% Similarity=0.176 Sum_probs=245.1
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc------------ccccccceeEEecccchhhHhhhcc--CC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM------------TEDMFCHEFHLVDLRVMDNCLKVTK--GV 91 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------~~~~~~i~~~~~dl~~~~~~~~~~~--~~ 91 (374)
.|++||||||||||++|++.|+++||+|++++|..+... ......++++.+|+.+.+.+...++ ++
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 80 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 80 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence 378999999999999999999999999999999654211 0112246788999999999988875 78
Q ss_pred CEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhC-----CCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 92 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRIS-----GVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-----~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
|+|||+|+..+. .....++...+..|+.++.++++++++. ...++++.||..+|+.... +++|++ +.
T Consensus 81 D~Vih~Aa~~~~-~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~-----~~~E~~--~~ 152 (339)
T d1n7ha_ 81 DEVYNLAAQSHV-AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-----PQSETT--PF 152 (339)
T ss_dssp SEEEECCSCCCH-HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-----SBCTTS--CC
T ss_pred chhhhccccccc-cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCC-----CCCCCC--CC
Confidence 999999997542 1233466778889999999999998753 3447889999988876543 578877 77
Q ss_pred CCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHH
Q 017290 167 EPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFID 246 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 246 (374)
.|.+.|+.+|..+|.++..|.+.++++++++||+++|||..........+...+.....+.....+.+++.+.++++|++
T Consensus 153 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~ 232 (339)
T d1n7ha_ 153 HPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAG 232 (339)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHH
T ss_pred CCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeee
Confidence 89999999999999999999999999999999999999975422212233333344444455666778899999999999
Q ss_pred HHHHHHHhhhccCCCCcEEecCCCccCHHHHHHHHHHhcCCCCCccc----C-CCCCCCcccccchHHHHHhcCCCcCCC
Q 017290 247 ECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHH----I-PGPEGVRGRNSDNTLIKEKLGWAPSMK 321 (374)
Q Consensus 247 Dva~~i~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~----~-~~~~~~~~~~~d~~k~~~~lg~~p~~~ 321 (374)
|+|+++..+++++....+++..+...++.++++++.+.++...+... . ..+........|++|++++|||+|+++
T Consensus 233 D~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~~Kak~~LGw~P~~~ 312 (339)
T d1n7ha_ 233 DYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVG 312 (339)
T ss_dssp HHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSC
T ss_pred hHHHHHHHHHhcCCCCccccccccccccchhhhhhhhhhhcccCceeeeccCCCCCCCCCeeeECHHHHHHHHCCCcCCC
Confidence 99999999999998888888889999999999999999987643211 1 123334556779999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhh
Q 017290 322 LKDGLRITYFWIKEQIEKEK 341 (374)
Q Consensus 322 ~~~~l~~~~~~~~~~~~~~~ 341 (374)
++++|+++++|+.+...+.+
T Consensus 313 le~gi~~ti~~~~~~~~~~~ 332 (339)
T d1n7ha_ 313 FEKLVKMMVDEDLELAKREK 332 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhh
Confidence 99999999999988766654
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.3e-42 Score=316.20 Aligned_cols=292 Identities=23% Similarity=0.460 Sum_probs=235.4
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMGG 103 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~~ 103 (374)
.|||||||||||||++|+++|+++||.|+++++..+ .|+.+.+.+..+++ ++|.|||+|+..+.
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~--------------~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~ 67 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------LNLLDSRAVHDFFASERIDQVYLAAAKVGG 67 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh--------------ccccCHHHHHHHHhhcCCCEEEEcchhccc
Confidence 579999999999999999999999999988765432 46778888888775 79999999987654
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCC---CCCCCCchHHhHHHHH
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW---PAEPQDAYGLEKLASE 180 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~---~~~~~~~y~~sK~~~E 180 (374)
......+....+..|+.++.+++++|.+.+++||||+||.+||+..... +++|+.+. +..+.+.|+.+|..+|
T Consensus 68 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~----~~~E~~~~~~~~~~~~~~Y~~sK~~~E 143 (315)
T d1e6ua_ 68 IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQ----PMAESELLQGTLEPTNEPYAIAKIAGI 143 (315)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCS----SBCGGGTTSSCCCGGGHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCC----CccCCccccCCCCCCCCHHHHHHHHHH
Confidence 3333445566788999999999999999999999999999999976543 34554322 2234467999999999
Q ss_pred HHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCc-H----HHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhh
Q 017290 181 ELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKA-P----AAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255 (374)
Q Consensus 181 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~ 255 (374)
++++.|.++.+++++++||+.+|||++........ . ..........+..+.+.+++.+.++++|+.|++.++..+
T Consensus 144 ~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~ 223 (315)
T d1e6ua_ 144 KLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHV 223 (315)
T ss_dssp HHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHh
Confidence 99999999999999999999999998764432222 1 222233344467888889999999999999999999998
Q ss_pred hccC----------CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCC-CCCCcccccchHHHHHhcCCCcCCCHHH
Q 017290 256 TKSD----------FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPSMKLKD 324 (374)
Q Consensus 256 ~~~~----------~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~d~~k~~~~lg~~p~~~~~~ 324 (374)
+++. ....++++.+.+.++.++++.+.+.+|.+..+...+. +.......+|++|++ +|||.|++++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~d~sk~k-~Lg~~p~~~l~e 302 (315)
T d1e6ua_ 224 MELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLH-QLGWYHEISLEA 302 (315)
T ss_dssp HHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBCCHHHH-HTTCCCCCCHHH
T ss_pred hhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECCCCCCCCceeccCHHHHH-HcCCCCCCCHHH
Confidence 8653 3578999999999999999999999999877665543 344555678999997 599999999999
Q ss_pred HHHHHHHHHHHh
Q 017290 325 GLRITYFWIKEQ 336 (374)
Q Consensus 325 ~l~~~~~~~~~~ 336 (374)
+|+++++||++.
T Consensus 303 ~i~~ti~w~~~N 314 (315)
T d1e6ua_ 303 GLASTYQWFLEN 314 (315)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 999999999974
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=5.3e-41 Score=313.70 Aligned_cols=308 Identities=18% Similarity=0.268 Sum_probs=240.0
Q ss_pred CCeEEEEcCcchhHHHHHHHHHh-CCCEEEEEeCCCCcc-----------------------cccccccceeEEecccch
Q 017290 26 KLRISVTGAGGFIASHIARRLKS-EGHYIIASDWKKNEH-----------------------MTEDMFCHEFHLVDLRVM 81 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~-----------------------~~~~~~~i~~~~~dl~~~ 81 (374)
.||||||||+||||++|+++|++ .||+|+++++-.... .......+.++.+|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 47999999999999999999997 689999997422110 001112467889999999
Q ss_pred hhHhhhcc---CCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccc---cc
Q 017290 82 DNCLKVTK---GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLE---TN 155 (374)
Q Consensus 82 ~~~~~~~~---~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~---~~ 155 (374)
+.+.++++ ++|+|||+|+.... ......+...+..|+.++.++++++++.++++++++||..+|+...... ..
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~-~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 160 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAV-GESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA 160 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHhhhhhhccceeehhhcccccccc-cccccccccccccccccccccchhhhccCCcccccccccccccccccccccccc
Confidence 99888875 67999999997542 2334456667889999999999999999999999999999998755422 12
Q ss_pred cCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCC------CCCcHHHHHHHHh-----
Q 017290 156 VSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG------MEKAPAAFCRKAL----- 224 (374)
Q Consensus 156 ~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~------~~~~~~~~~~~~~----- 224 (374)
.++.|+. +..|.+.|+.+|...|.+++.|.+.++++++++|++.+|||...... ....++.++.+.+
T Consensus 161 ~~~~e~~--~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~ 238 (383)
T d1gy8a_ 161 EPIDINA--KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAP 238 (383)
T ss_dssp CCBCTTS--CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSC
T ss_pred ccccccc--CCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccc
Confidence 2466665 67889999999999999999999999999999999999999865332 1122333333222
Q ss_pred ----------ccCCceEeeC------CCcccccceeHHHHHHHHHhhhccC----------CCCcEEecCCCccCHHHHH
Q 017290 225 ----------TSTDKFEMWG------DGLQTRSFTFIDECVEGVLRLTKSD----------FREPVNIGSDEMVSMNEMA 278 (374)
Q Consensus 225 ----------~~~~~~~~~~------~~~~~~~~i~~~Dva~~i~~~~~~~----------~~~~~~i~~~~~~s~~e~~ 278 (374)
..+.++.+++ +|.+.++|+|++|+|++++.+++.. ..++||+++++++++.|++
T Consensus 239 ~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~ 318 (383)
T d1gy8a_ 239 DQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVI 318 (383)
T ss_dssp C-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHH
T ss_pred cccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHH
Confidence 1234455554 3677899999999999999988641 2478999999999999999
Q ss_pred HHHHHhcCCCCCcccCCCCC-CCcccccchHHHHHhcCCCcCCCHHHHHHHH-HHHHHHh
Q 017290 279 EIVLSFEDKKLPIHHIPGPE-GVRGRNSDNTLIKEKLGWAPSMKLKDGLRIT-YFWIKEQ 336 (374)
Q Consensus 279 ~~i~~~~g~~~~~~~~~~~~-~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~-~~~~~~~ 336 (374)
+++.+.+|.+.++...+... +......|++|++++|||+|+++++++|+++ +.|++++
T Consensus 319 ~~i~~~~~~~~~~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~ 378 (383)
T d1gy8a_ 319 EVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH 378 (383)
T ss_dssp HHHHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCCCceEECCCCCCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhC
Confidence 99999999988777665443 3455677999999999999999999999887 5888775
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.7e-40 Score=311.30 Aligned_cols=317 Identities=18% Similarity=0.166 Sum_probs=236.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCC-----------CC--cccc----------cccccceeEEecccchh
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWK-----------KN--EHMT----------EDMFCHEFHLVDLRVMD 82 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~-----------~~--~~~~----------~~~~~i~~~~~dl~~~~ 82 (374)
+|||||||||||||++|+++|++.||+|++++.. .+ .... ....+++++.+|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 5899999999999999999999999999999621 00 0000 01235789999999999
Q ss_pred hHhhhcc--CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeecccccCCCcccccc-
Q 017290 83 NCLKVTK--GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRISGVK-RFFYASSACIYPEFKQLETN- 155 (374)
Q Consensus 83 ~~~~~~~--~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss~~vy~~~~~~~~~- 155 (374)
.+.++++ ++|+|||+|+..... .+. ..+...+..|+.++.+++++|++.+++ ++++.||..+|+........
T Consensus 81 ~l~~~~~~~~~d~ViHlAa~~~~~-~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~ 159 (393)
T d1i24a_ 81 FLAESFKSFEPDSVVHFGEQRSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEG 159 (393)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSS
T ss_pred HHHHHHHhhcchheeccccccccc-cccccccccccccccccccccHHHHHHHHhccccceeeccccccccccccccccc
Confidence 9999987 679999999864321 111 223456789999999999999998865 67888888888754321000
Q ss_pred ------cCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCC--------------CCCc
Q 017290 156 ------VSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG--------------MEKA 215 (374)
Q Consensus 156 ------~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~--------------~~~~ 215 (374)
....++.+.+..|.+.|+.+|..+|.+++.|.++.+++++++||+.+||+...... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (393)
T d1i24a_ 160 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 239 (393)
T ss_dssp EEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCH
T ss_pred cccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccc
Confidence 01112222356788999999999999999999999999999999999999754321 1223
Q ss_pred HHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC-CCCcEEe--cCCCccCHHHHHHHHHHhc---CCCC
Q 017290 216 PAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-FREPVNI--GSDEMVSMNEMAEIVLSFE---DKKL 289 (374)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~-~~~~~~i--~~~~~~s~~e~~~~i~~~~---g~~~ 289 (374)
+..++.+... ++++.++|++.+.++|+|++|++++++.++++. ..+.|++ ++++.+++.|+++++.++. +.+.
T Consensus 240 i~~~~~~~~~-~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~ 318 (393)
T d1i24a_ 240 LNRFCVQAAV-GHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDV 318 (393)
T ss_dssp HHHHHHHHHH-TCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCC
T ss_pred hhhhhHHhhc-CCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCc
Confidence 4555555544 788999999999999999999999999999876 4555544 4557899999999998764 4444
Q ss_pred CcccCCCC---CCCcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHHHhhhhhhhcCc
Q 017290 290 PIHHIPGP---EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGI 345 (374)
Q Consensus 290 ~~~~~~~~---~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (374)
+....+.+ ........|++|+++ |||+|+++++++++++++|+++...+.+...+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~d~~k~~~-LGw~P~~~~~~~i~~~~~~~~~~k~~~~~~~~ 376 (393)
T d1i24a_ 319 KKMTVPNPRVEAEEHYYNAKHTKLME-LGLEPHYLSDSLLDSLLNFAVQFKDRVDTKQI 376 (393)
T ss_dssp CEEEECCSSCSCSSCCCCBCCCHHHH-TTCCCCCCCHHHHHHHHHHHHHTGGGCCGGGS
T ss_pred ceeeccCCCCCCCccEecCCHHHHHH-cCCccccCHHHHHHHHHHHHHHHHHhhhHhhc
Confidence 44444332 223345678889875 99999999999999999999998887654443
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=100.00 E-value=7.1e-40 Score=300.42 Aligned_cols=307 Identities=21% Similarity=0.269 Sum_probs=240.1
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc------cccccceeEEecccchhhHhhhcc--CCCEEEEccc
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT------EDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAA 99 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~ 99 (374)
||||||||||||++|+++|+++||+|+++++-...... ....+++++.+|+++.+.+.++++ ++|+|||+|+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa 81 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence 79999999999999999999999999999754322111 123467899999999999999987 5799999999
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccccc-CCCccccccc----------CCCCCCCCCCCC
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY-PEFKQLETNV----------SLKESDAWPAEP 168 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy-~~~~~~~~~~----------~~~e~~~~~~~~ 168 (374)
.... .....++...+++|+.++.+|+++|.+.+++++|++||..++ +.....+... +.......+..|
T Consensus 82 ~~~~-~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T d1orra_ 82 QVAM-TTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF 160 (338)
T ss_dssp CCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred cccc-cccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcccc
Confidence 7642 223346678889999999999999999998766666665544 4332211100 111111125568
Q ss_pred CCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHh----ccCCceEeeCCCccccccee
Q 017290 169 QDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKAL----TSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 169 ~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~ 244 (374)
.+.|+.+|...|.++..+...++...+++|++.+|++..........+..++...+ ..++++.+++++.+.++|+|
T Consensus 161 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~ 240 (338)
T d1orra_ 161 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH 240 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred ccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeec
Confidence 89999999999999999999999999999999999876544444455555554433 24678889999999999999
Q ss_pred HHHHHHHHHhhhccC---CCCcEEec--CCCccCHHHHHHHHHHhcCCCCCcccCCCC-CCCcccccchHHHHHhcCCCc
Q 017290 245 IDECVEGVLRLTKSD---FREPVNIG--SDEMVSMNEMAEIVLSFEDKKLPIHHIPGP-EGVRGRNSDNTLIKEKLGWAP 318 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~---~~~~~~i~--~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-~~~~~~~~d~~k~~~~lg~~p 318 (374)
++|++++++.++++. .+++|++. .+..+++.|+++.+.+..+.+.++...+.. ........|++|++++|||+|
T Consensus 241 v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p 320 (338)
T d1orra_ 241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSP 320 (338)
T ss_dssp HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSCCSEECBCCHHHHHHHCCCC
T ss_pred ccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCCCCCcCeeeECHHHHHHHHCCCc
Confidence 999999999998764 47889984 456799999999999999988776666543 334556779999999999999
Q ss_pred CCCHHHHHHHHHHHHHH
Q 017290 319 SMKLKDGLRITYFWIKE 335 (374)
Q Consensus 319 ~~~~~~~l~~~~~~~~~ 335 (374)
+++++++|+++++|+++
T Consensus 321 ~~sl~e~i~~ti~W~k~ 337 (338)
T d1orra_ 321 KVSAKDGVQKMYDWTSS 337 (338)
T ss_dssp CSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHc
Confidence 99999999999999986
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=100.00 E-value=2.9e-37 Score=285.25 Aligned_cols=307 Identities=18% Similarity=0.182 Sum_probs=233.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc--CCCEEEEc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNL 97 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~ 97 (374)
..|||||||||||||++|++.|+++||+|++++|+....... ...+++++.+|++|.+.+.++++ .+|+|+|+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~ 86 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 86 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence 459999999999999999999999999999999987654321 12368999999999999988886 78999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhH
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEK 176 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK 176 (374)
|+.... ..+...+...+.+|+.++.++++++++.+.+ .+++.||..+|...... .+..|++ +..|.+.|+.+|
T Consensus 87 aa~~~~-~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~---~~~~~~~--~~~p~~~y~~~k 160 (356)
T d1rkxa_ 87 AAQPLV-RLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWI---WGYRENE--AMGGYDPYSNSK 160 (356)
T ss_dssp CSCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSS---SCBCTTS--CBCCSSHHHHHH
T ss_pred hccccc-cccccCCccccccccccchhhhhhhhccccccccccccccccccccccc---ccccccc--ccCCCCcccccc
Confidence 986532 1233466778899999999999999987644 56666555555443321 1344554 667889999999
Q ss_pred HHHHHHHHHHHh---------hhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHH
Q 017290 177 LASEELCKHYTK---------DFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247 (374)
Q Consensus 177 ~~~E~~~~~~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 247 (374)
...|..+..+.. ..++.++++||+.+|||++.. ...++..++... .++.+ .+++.+.+.++++|+.|
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~--~~~~i~~~~~~~-~~~~~-~~~~~~~~~~~~~~v~D 236 (356)
T d1rkxa_ 161 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA--LDRIVPDILRAF-EQSQP-VIIRNPHAIRPWQHVLE 236 (356)
T ss_dssp HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC--SSCHHHHHHHHH-HTTCC-EECSCTTCEECCEETHH
T ss_pred ccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcch--hhHHHHHHHHHH-hCCCc-eEEeecccccccccccc
Confidence 999999988765 346889999999999997532 234555555544 43444 45688889999999999
Q ss_pred HHHHHHhhhccCC------CCcE--EecCCCccCHHHHHHHHHHhcCCCCCcccCCC--CCCCcccccchHHHHHhcCCC
Q 017290 248 CVEGVLRLTKSDF------REPV--NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG--PEGVRGRNSDNTLIKEKLGWA 317 (374)
Q Consensus 248 va~~i~~~~~~~~------~~~~--~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~--~~~~~~~~~d~~k~~~~lg~~ 317 (374)
++.++..++.+.. +... +......+++.++++.+.+.++.+..+..... +.+......|++|++++|||+
T Consensus 237 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~skak~~LGw~ 316 (356)
T d1rkxa_ 237 PLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWH 316 (356)
T ss_dssp HHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHCCC
T ss_pred ccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCCCCCCcCeeeEcHHHHHHHHCCC
Confidence 9999998887631 2233 33445789999999999999998766544322 233455678999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHhhhhhh
Q 017290 318 PSMKLKDGLRITYFWIKEQIEKEK 341 (374)
Q Consensus 318 p~~~~~~~l~~~~~~~~~~~~~~~ 341 (374)
|+++++++|+++++||++.....+
T Consensus 317 P~~~l~egi~~ti~wyk~~~~~~~ 340 (356)
T d1rkxa_ 317 PRWNLNTTLEYIVGWHKNWLSGTD 340 (356)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999998766544
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=100.00 E-value=3.5e-37 Score=275.23 Aligned_cols=271 Identities=18% Similarity=0.176 Sum_probs=223.9
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccCCc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMGGM 104 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~~~ 104 (374)
|||||||||||||++|+++|.++||+|++++|+. .|+.|.+.+.++++ ++|+|||+|+....
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~~- 65 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVINCAAHTAV- 65 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCH-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------ccCCCHHHHHHHHHHcCCCEEEeecccccc-
Confidence 7899999999999999999999999999999863 47888888888886 78999999986542
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
......+......|+.....+.+.+...+. +++++||..+|+..... +.+|.+ +..|...|+.+|...|.+++
T Consensus 66 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~ss~~v~~~~~~~----~~~e~~--~~~~~~~~~~~k~~~e~~~~ 138 (281)
T d1vl0a_ 66 DKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKE----PITEFD--EVNPQSAYGKTKLEGENFVK 138 (281)
T ss_dssp HHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSS----CBCTTS--CCCCCSHHHHHHHHHHHHHH
T ss_pred ccccccchhhcccccccccccccccccccc-cccccccceeeeccccc----cccccc--cccchhhhhhhhhHHHHHHH
Confidence 233345566677888888899888888775 88999999999876543 467776 66888999999999999887
Q ss_pred HHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCCCCcE
Q 017290 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPV 264 (374)
Q Consensus 185 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~~~~~ 264 (374)
. .+.+++++||+.+||++.+ ....++..... +..+.+.+ ++.++++|++|+++++..++++...++|
T Consensus 139 ~----~~~~~~i~R~~~vyG~~~~------~~~~~~~~~~~-~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~~g~~ 205 (281)
T d1vl0a_ 139 A----LNPKYYIVRTAWLYGDGNN------FVKTMINLGKT-HDELKVVH--DQVGTPTSTVDLARVVLKVIDEKNYGTF 205 (281)
T ss_dssp H----HCSSEEEEEECSEESSSSC------HHHHHHHHHHH-CSEEEEES--SCEECCEEHHHHHHHHHHHHHHTCCEEE
T ss_pred H----hCCCccccceeEEeCCCcc------cccchhhhhcc-CCceeecC--CceeccchhhhhhhhhhhhhhhcccCce
Confidence 7 5789999999999999653 55556655544 55666654 5789999999999999999999988999
Q ss_pred EecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCC------CcccccchHHHHHhcCCCcCCCHHHHHHHHHHHHH
Q 017290 265 NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG------VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIK 334 (374)
Q Consensus 265 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~------~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~ 334 (374)
|+++++.+|+.|+++.+.+.+|.+.++..++.... ....++|++|+++.|||+|. +++++|++++++++
T Consensus 206 ~~~~~~~~s~~e~~~~i~~~~g~~~~i~~i~~~~~~~~a~rp~~~~ld~~k~~~~~g~~~~-~~~~~l~~~l~~l~ 280 (281)
T d1vl0a_ 206 HCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ 280 (281)
T ss_dssp ECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred eEeCCCccchHHHHHHHHHHhCCCceEEeccHHHcCCcCCCccccccCHHHHHHHhCCCCC-CHHHHHHHHHHHhc
Confidence 99999999999999999999999877765543221 12345799999999999997 99999999999985
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=100.00 E-value=5.8e-37 Score=281.78 Aligned_cols=298 Identities=15% Similarity=0.093 Sum_probs=218.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhccCCCEEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
.+++||||||+||||++|+++|+++||+|+++.|+.++.... .......+.+|+.+.+.+.+++.++|+|+|
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~ 89 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH 89 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhh
Confidence 578999999999999999999999999999999976432111 111234577899999999999999999999
Q ss_pred cccccCCcccccCCcceehhhhHHHHHHHHHHHHhC-CCCeEEEeecccccCCCcccccccCC----------------C
Q 017290 97 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRIS-GVKRFFYASSACIYPEFKQLETNVSL----------------K 159 (374)
Q Consensus 97 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~i~~Ss~~vy~~~~~~~~~~~~----------------~ 159 (374)
+++... ...+....+..|+.++.+++++|.+. ++++|||+||..++........+... .
T Consensus 90 ~a~~~~----~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 165 (342)
T d1y1pa1 90 IASVVS----FSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLP 165 (342)
T ss_dssp CCCCCS----CCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSC
T ss_pred hccccc----ccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccccccc
Confidence 999653 23455667788999999999999887 58999999997665432221111111 2
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhhhC--CcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKDFG--IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
|+. +..|.+.|+.+|..+|.+++.|.+.++ ++++++||+.+|||...+.........++...+.+ ..... ..+.
T Consensus 166 e~~--~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g-~~~~~-~~~~ 241 (342)
T d1y1pa1 166 ESD--PQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNG-EVSPA-LALM 241 (342)
T ss_dssp TTS--TTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTT-CCCHH-HHTC
T ss_pred ccC--CCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcC-CcCcc-cCCc
Confidence 222 445667899999999999999988765 67888999999998644433445566676666653 33333 2345
Q ss_pred ccccceeHHHHHHHHHhhhccC-CCCcEEecCCCccCHHHHHHHHHHhcCC-CCCcccCCCCCCC--cccccchHHHHHh
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIVLSFEDK-KLPIHHIPGPEGV--RGRNSDNTLIKEK 313 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~--~~~~~d~~k~~~~ 313 (374)
+.++|+|+.|+|++++.+++++ .++.|++++++.+++.|+++++.+.++. +++. ..+..... ......+.+..+.
T Consensus 242 ~~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~-~~~~~~~~~~~~~~~~s~~~~k~ 320 (342)
T d1y1pa1 242 PPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPA-DFPDQGQDLSKFDTAPSLEILKS 320 (342)
T ss_dssp CSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCC-CCCCCCCCCCEECCHHHHHHHHH
T ss_pred cceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCc-cCCccCcccccccchHHHHHHHH
Confidence 6689999999999999999886 5777889999999999999999998743 2222 12211111 1111123444456
Q ss_pred cCCCcCCCHHHHHHHHHH
Q 017290 314 LGWAPSMKLKDGLRITYF 331 (374)
Q Consensus 314 lg~~p~~~~~~~l~~~~~ 331 (374)
|||.|.++++++|+++++
T Consensus 321 lg~~~~~~lee~i~d~I~ 338 (342)
T d1y1pa1 321 LGRPGWRSIEESIKDLVG 338 (342)
T ss_dssp TTCCSCCCHHHHHHHHHC
T ss_pred cCCCCCcCHHHHHHHHHH
Confidence 999999999999999986
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.3e-35 Score=267.85 Aligned_cols=292 Identities=21% Similarity=0.273 Sum_probs=200.3
Q ss_pred EEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccccccceeEEecccchhhH------hhhccCCCEEEEccccc
Q 017290 29 ISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNC------LKVTKGVDHVFNLAADM 101 (374)
Q Consensus 29 ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~------~~~~~~~d~vi~~a~~~ 101 (374)
||||||+||||++|++.|+++|+ +|+++++-......... .+....|..+.+.+ ...+..+++|+|+|+..
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~ 79 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL--VDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS 79 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH--HTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcc--cccchhhhccchHHHHHHhhhhcccchhhhhhhcccc
Confidence 89999999999999999999995 79998744332111110 11222222222221 12234789999999854
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHH
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEE 181 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~ 181 (374)
. ....+.......|+.++.+++++++..++ ++|+.||..+|...... ...+++ +..|.+.|+.+|..+|.
T Consensus 80 ~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~i-~~v~~ss~~~~~~~~~~----~~~~~~--~~~~~~~Y~~~K~~~e~ 149 (307)
T d1eq2a_ 80 S---TTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSD----FIESRE--YEKPLNVYGYSKFLFDE 149 (307)
T ss_dssp C---TTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSC----BCSSGG--GCCCSSHHHHHHHHHHH
T ss_pred c---ccccccccccccccccccccccccccccc-ccccccccccccccccc----cccccc--ccccccccccccchhhh
Confidence 3 33445566778889999999999999998 47777777776654321 233333 55788999999999999
Q ss_pred HHHHHHhhhCCcEEEEeeCcccCCCCCCCCCC-CcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC
Q 017290 182 LCKHYTKDFGIECRVGRFHNIYGPFGTWKGME-KAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 182 ~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~ 260 (374)
+++.+...++++++++||+.+|||........ ..+..++.....+.......+++...++++|+.|++.++..+++++.
T Consensus 150 ~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~ 229 (307)
T d1eq2a_ 150 YVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV 229 (307)
T ss_dssp HHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC
T ss_pred hccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc
Confidence 99999999999999999999999976544333 33444444444433344455788889999999999999999999999
Q ss_pred CCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCCCCC-----CcccccchHHHHHhcCCCcCCCHHHHHHHHHHHH
Q 017290 261 REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-----VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWI 333 (374)
Q Consensus 261 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-----~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~ 333 (374)
.+.||++++...++.|+++++.+..+. ..+...|.+.. ......|++|+++.+||+|+++++++|+++++|+
T Consensus 230 ~~~~~~~~~~~~si~~i~~~i~~~~~~-~~i~~~~~~~~~~~~~~~~~~~d~~k~~~~~~~~p~~sl~egi~~~i~w~ 306 (307)
T d1eq2a_ 230 SGIFNLGTGRAESFQAVADATLAYHKK-GQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWL 306 (307)
T ss_dssp CEEEEESCSCCBCHHHHHHHC----------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHT
T ss_pred ccccccccccchhHHHHHHHHHHhcCC-CCeeEeeCCccCCCCCceeeecCHHHHHHHHCCCCCCCHHHHHHHHHHhC
Confidence 999999999999999999999887653 22333332211 2233458999999999999999999999999996
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=100.00 E-value=1.5e-32 Score=246.68 Aligned_cols=276 Identities=15% Similarity=0.158 Sum_probs=206.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEcccccCCc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAADMGGM 104 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~~~~~~ 104 (374)
||||||||+||||++|++.|.+.|+.|.+ ++.... +.+|++|.+.+.++++ ++|+|||||+... .
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~~-----------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~-~ 67 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSKE-----------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTA-V 67 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCSS-----------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCC-H
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCcc-----------ccCcCCCHHHHHHHHHHcCCCEEEEeccccc-c
Confidence 78999999999999999999988875544 444321 3478999999998886 6899999999653 2
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHH
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~ 184 (374)
..+..++...+..|+.++.+++++|++.++ +++++||+.+|...... +++|++ +..|.+.|+.+|..+|.++.
T Consensus 68 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~----~~~E~~--~~~p~~~y~~~k~~~e~~~~ 140 (298)
T d1n2sa_ 68 DKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDI----PWQETD--ATSPLNVYGKTKLAGEKALQ 140 (298)
T ss_dssp HHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTC----CBCTTS--CCCCSSHHHHHHHHHHHHHH
T ss_pred cccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCC----CCcccc--ccCCCchHhhhhhhhhhhHH
Confidence 344566777889999999999999999986 79999999998765432 577777 77899999999999999988
Q ss_pred HHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhcc-----C
Q 017290 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS-----D 259 (374)
Q Consensus 185 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~-----~ 259 (374)
.+. ....++|++..++.... .....+...+.....+.+. +....+++|+.|+++++..+++. .
T Consensus 141 ~~~----~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~i~~~~~~~~ 208 (298)
T d1n2sa_ 141 DNC----PKHLIFRTSWVYAGKGN------NFAKTMLRLAKERQTLSVI--NDQYGAPTGAELLADCTAHAIRVALNKPE 208 (298)
T ss_dssp HHC----SSEEEEEECSEECSSSC------CHHHHHHHHHHHCSEEEEE--CSCEECCEEHHHHHHHHHHHHHHHHHCGG
T ss_pred hhh----cccccccccceeeccCC------ccchhhhhhhcccceeecc--cceeecccccchHHHHHHHHHhhhhcccc
Confidence 743 45666776666644321 2223334444445556554 35678999999999999887753 2
Q ss_pred CCCcEEecCCCccCHHHHHHHHHHhcCC---CCCccc---CCCCCC------CcccccchHHHHHhcCCCcCCCHHHHHH
Q 017290 260 FREPVNIGSDEMVSMNEMAEIVLSFEDK---KLPIHH---IPGPEG------VRGRNSDNTLIKEKLGWAPSMKLKDGLR 327 (374)
Q Consensus 260 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~---~~~~~~---~~~~~~------~~~~~~d~~k~~~~lg~~p~~~~~~~l~ 327 (374)
..++||+++++.+++.++++.+.+..+. ...... ++.... ....++|++|+++.|||+|. +++++|+
T Consensus 209 ~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~ld~~K~~~~~~~~~~-~~~~gl~ 287 (298)
T d1n2sa_ 209 VAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILP-QWELGVK 287 (298)
T ss_dssp GCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCC-BHHHHHH
T ss_pred ccccccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCCCccccccCHHHHHHHHCCCCC-cHHHHHH
Confidence 5799999999999999999988765532 222111 111110 12346899999999999996 9999999
Q ss_pred HHHHHHHH
Q 017290 328 ITYFWIKE 335 (374)
Q Consensus 328 ~~~~~~~~ 335 (374)
++++++..
T Consensus 288 ~~i~~~~~ 295 (298)
T d1n2sa_ 288 RMLTEMFT 295 (298)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHh
Confidence 99998764
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.5e-29 Score=214.93 Aligned_cols=200 Identities=14% Similarity=0.024 Sum_probs=161.6
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGG 103 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~ 103 (374)
|.|+||+|+||||+||++++++|+++||+|++++|++++.......+++++.+|++|.+.+.++++++|+|||+++...
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~- 79 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN- 79 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTT-
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccCC-
Confidence 4689999999999999999999999999999999998876666667789999999999999999999999999998532
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHH
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELC 183 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~ 183 (374)
.......+..++.++++++++++++|||++||..+|..... .......|...|..+|+.+
T Consensus 80 -------~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~-------------~~~~~~~~~~~~~~~e~~l 139 (205)
T d1hdoa_ 80 -------DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK-------------VPPRLQAVTDDHIRMHKVL 139 (205)
T ss_dssp -------CCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTC-------------SCGGGHHHHHHHHHHHHHH
T ss_pred -------chhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcc-------------ccccccccchHHHHHHHHH
Confidence 12234567889999999999999999999999988765331 1122346778888888877
Q ss_pred HHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC--C
Q 017290 184 KHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF--R 261 (374)
Q Consensus 184 ~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~--~ 261 (374)
++ .+++++++||+.+++... .....+..++.....+|+.+|+|++++.+++++. +
T Consensus 140 ~~----~~~~~tiirp~~~~~~~~-------------------~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g 196 (205)
T d1hdoa_ 140 RE----SGLKYVAVMPPHIGDQPL-------------------TGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDG 196 (205)
T ss_dssp HH----TCSEEEEECCSEEECCCC-------------------CSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTT
T ss_pred Hh----cCCceEEEecceecCCCC-------------------cccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCC
Confidence 65 789999999999986532 1123344566677889999999999999998873 6
Q ss_pred CcEEec
Q 017290 262 EPVNIG 267 (374)
Q Consensus 262 ~~~~i~ 267 (374)
+.+.++
T Consensus 197 ~~~~~s 202 (205)
T d1hdoa_ 197 HSTYPS 202 (205)
T ss_dssp CEEEEE
T ss_pred EEEecC
Confidence 666554
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=6e-29 Score=215.19 Aligned_cols=208 Identities=13% Similarity=0.059 Sum_probs=161.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
|++|+|||||||||||++|+++|+++|+ +|++++|++..........++...+|+.+.+.+.++++++|+||||++..
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~ 91 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 91 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeeccccccccccccccccccccccccc
Confidence 4568999999999999999999999984 89999998876555555677888899999999999999999999999854
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHH
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEE 181 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~ 181 (374)
....+......+|+.++.+++++|.+.++++|||+||..++. .+.+.|+.+|..+|+
T Consensus 92 ----~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~-------------------~~~~~Y~~~K~~~E~ 148 (232)
T d2bkaa1 92 ----RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK-------------------SSNFLYLQVKGEVEA 148 (232)
T ss_dssp ----HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-------------------TCSSHHHHHHHHHHH
T ss_pred ----ccccchhhhhhhcccccceeeecccccCccccccCCcccccc-------------------CccchhHHHHHHhhh
Confidence 222344566788999999999999999999999999987753 234679999999999
Q ss_pred HHHHHHhhhCCc-EEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCC
Q 017290 182 LCKHYTKDFGIE-CRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 182 ~~~~~~~~~~~~-~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~ 260 (374)
.+.+ .+++ ++|+||+.+||+... ......++...+. .+..+......||++|+|++++.++.++.
T Consensus 149 ~l~~----~~~~~~~IlRP~~i~G~~~~----~~~~~~~~~~~~~------~~~~~~~~~~~I~~~dvA~a~i~~~~~~~ 214 (232)
T d2bkaa1 149 KVEE----LKFDRYSVFRPGVLLCDRQE----SRPGEWLVRKFFG------SLPDSWASGHSVPVVTVVRAMLNNVVRPR 214 (232)
T ss_dssp HHHT----TCCSEEEEEECCEEECTTGG----GSHHHHHHHHHHC------SCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred cccc----ccccceEEecCceeecCCCc----CcHHHHHHHHHhh------ccCCcccCCCeEEHHHHHHHHHHHHhcCc
Confidence 8877 4654 899999999998642 1222222233322 12234445567999999999998887764
Q ss_pred -CCcEEecC
Q 017290 261 -REPVNIGS 268 (374)
Q Consensus 261 -~~~~~i~~ 268 (374)
++.+.+.+
T Consensus 215 ~~~~~i~~~ 223 (232)
T d2bkaa1 215 DKQMELLEN 223 (232)
T ss_dssp CSSEEEEEH
T ss_pred cCCeEEEcH
Confidence 56666654
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.96 E-value=2e-29 Score=227.52 Aligned_cols=238 Identities=16% Similarity=0.144 Sum_probs=181.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhccCCCEEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTKGVDHVFN 96 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~ 96 (374)
+++||||||||||||++|+++|+++||+|++++|++...... ...+++++.+|+.+.+.+...+++++++|+
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~ 81 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS 81 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence 467899999999999999999999999999999986543211 234688999999999999999999999999
Q ss_pred cccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhH
Q 017290 97 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEK 176 (374)
Q Consensus 97 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK 176 (374)
+++... ...|..++.+++++|.+.+..++++.||.+++.... .. +..+...|...|
T Consensus 82 ~~~~~~------------~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~----------~~--~~~~~~~~~~~~ 137 (312)
T d1qyda_ 82 ALAGGV------------LSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIM----------EH--ALQPGSITFIDK 137 (312)
T ss_dssp CCCCSS------------SSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSC----------CC--CCSSTTHHHHHH
T ss_pred hhhhcc------------cccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCc----------cc--ccchhhhhhHHH
Confidence 997432 123667778899999998877888888876654321 11 334555666666
Q ss_pred HHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhh
Q 017290 177 LASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT 256 (374)
Q Consensus 177 ~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~ 256 (374)
..++... ...+++++++|++.+||+...... .+..........+.+++++++.++++|++|+|++++.++
T Consensus 138 ~~~~~~~----~~~~~~~~i~r~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l 207 (312)
T d1qyda_ 138 RKVRRAI----EAASIPYTYVSSNMFAGYFAGSLA------QLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSI 207 (312)
T ss_dssp HHHHHHH----HHTTCCBCEEECCEEHHHHTTTSS------CTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHT
T ss_pred HHHHHhh----cccccceEEeccceeecCCccchh------hHHHHhhhcccccccccccccccceeeHHHHHHHHHHHh
Confidence 6665544 447899999999999997543211 111111223566777899999999999999999999999
Q ss_pred ccC--CCC-cEEecCCCccCHHHHHHHHHHhcCCCCCcccCCC
Q 017290 257 KSD--FRE-PVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG 296 (374)
Q Consensus 257 ~~~--~~~-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~ 296 (374)
+++ .++ .|++++++.+|+.|+++.+.+++|.+.+...+|.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~i~~ 250 (312)
T d1qyda_ 208 DDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISS 250 (312)
T ss_dssp TCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBCS
T ss_pred cCccccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCeEEECCH
Confidence 876 344 4667777889999999999999999887766653
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.95 E-value=2e-28 Score=219.84 Aligned_cols=231 Identities=17% Similarity=0.143 Sum_probs=175.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---------ccccceeEEecccchhhHhhhccCCCEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---------DMFCHEFHLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~i~~~~~dl~~~~~~~~~~~~~d~vi 95 (374)
++|||||||||||||++++++|+++||+|++++|++...... ...+++++.+|+.+...+...+++++.||
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi 81 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI 81 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence 468999999999999999999999999999999987653321 12367889999999999999999999999
Q ss_pred EcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHh
Q 017290 96 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLE 175 (374)
Q Consensus 96 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~s 175 (374)
|+++.. +..++.++++++...+++++++.|+...+.. +.. ...+...+...
T Consensus 82 ~~~~~~----------------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~-----------~~~--~~~~~~~~~~~ 132 (307)
T d1qyca_ 82 STVGSL----------------QIESQVNIIKAIKEVGTVKRFFPSEFGNDVD-----------NVH--AVEPAKSVFEV 132 (307)
T ss_dssp ECCCGG----------------GSGGGHHHHHHHHHHCCCSEEECSCCSSCTT-----------SCC--CCTTHHHHHHH
T ss_pred eccccc----------------ccchhhHHHHHHHHhccccceeeeccccccc-----------ccc--ccccccccccc
Confidence 998742 4445678889999999888998888644321 111 22233345555
Q ss_pred HHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhh
Q 017290 176 KLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255 (374)
Q Consensus 176 K~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~ 255 (374)
+...+.+++ ..+++++++||+.+||+.... +..++.. ...+....+++.+++.++++|++|+|++++.+
T Consensus 133 ~~~~~~~~~----~~~~~~~i~r~~~v~g~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 201 (307)
T d1qyca_ 133 KAKVRRAIE----AEGIPYTYVSSNCFAGYFLRS------LAQAGLT-APPRDKVVILGDGNARVVFVKEEDIGTFTIKA 201 (307)
T ss_dssp HHHHHHHHH----HHTCCBEEEECCEEHHHHTTT------TTCTTCS-SCCSSEEEEETTSCCEEEEECHHHHHHHHHTT
T ss_pred cccccchhh----ccCCCceecccceecCCCccc------hhhhhhh-hhhcccceeeecccccccCCcHHHHHHHHHHH
Confidence 555555544 478999999999999975432 1111111 22345677788999999999999999999999
Q ss_pred hccC--CCC-cEEecCCCccCHHHHHHHHHHhcCCCCCcccCC
Q 017290 256 TKSD--FRE-PVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP 295 (374)
Q Consensus 256 ~~~~--~~~-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~ 295 (374)
++++ .++ +|++++++.+|+.|+++.+.+++|.+.++..+|
T Consensus 202 l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~~~~~~ 244 (307)
T d1qyca_ 202 VDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVP 244 (307)
T ss_dssp SSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEEC
T ss_pred hcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCcEEECC
Confidence 9876 344 466678899999999999999999987766555
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.93 E-value=1.2e-25 Score=191.50 Aligned_cols=197 Identities=14% Similarity=0.086 Sum_probs=141.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccccccccceeEEecccchhhHhhhc-cCCCEEEEcccccC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT-KGVDHVFNLAADMG 102 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~-~~~d~vi~~a~~~~ 102 (374)
+|||||||||||||++|+++|+++|+ +|++++|++.... ..+. .+..|..++...+ ..+|+||||++...
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~----~~~~---~~~~d~~~~~~~~~~~~d~vi~~~g~~~ 74 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH----PRLD---NPVGPLAELLPQLDGSIDTAFCCLGTTI 74 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC----TTEE---CCBSCHHHHGGGCCSCCSEEEECCCCCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc----cccc---ccccchhhhhhccccchheeeeeeeeec
Confidence 48999999999999999999999998 6777777654321 1222 3333334444444 47899999998542
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHH
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL 182 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~ 182 (374)
............|+.++.+++++|++.++++++++||.++++. +.+.|+.+|..+|+.
T Consensus 75 ---~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~-------------------~~~~y~~~K~~~E~~ 132 (212)
T d2a35a1 75 ---KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------------SSIFYNRVKGELEQA 132 (212)
T ss_dssp ---HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------------CSSHHHHHHHHHHHH
T ss_pred ---cccccccccccchhhhhhhcccccccccccccccccccccccc-------------------cccchhHHHHHHhhh
Confidence 2233445678889999999999999999999999999887542 346899999999998
Q ss_pred HHHHHhhhCC-cEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccCCC
Q 017290 183 CKHYTKDFGI-ECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR 261 (374)
Q Consensus 183 ~~~~~~~~~~-~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~~~ 261 (374)
+++ .++ +++|+||+.+||+.... ....++ . .....+ .. ..+++||++|+|++++.+++++..
T Consensus 133 l~~----~~~~~~~I~Rp~~v~G~~~~~-----~~~~~~----~-~~~~~~-~~--~~~~~i~v~DvA~ai~~~~~~~~~ 195 (212)
T d2a35a1 133 LQE----QGWPQLTIARPSLLFGPREEF-----RLAEIL----A-APIARI-LP--GKYHGIEACDLARALWRLALEEGK 195 (212)
T ss_dssp HTT----SCCSEEEEEECCSEESTTSCE-----EGGGGT----T-CCCC-------CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred ccc----cccccceeeCCcceeCCcccc-----cHHHHH----H-HHHhhc-cC--CCCcEEEHHHHHHHHHHHHcCCCC
Confidence 765 455 59999999999986532 111111 1 111111 11 346779999999999999999887
Q ss_pred CcEEecC
Q 017290 262 EPVNIGS 268 (374)
Q Consensus 262 ~~~~i~~ 268 (374)
+.+++.+
T Consensus 196 g~~~~~~ 202 (212)
T d2a35a1 196 GVRFVES 202 (212)
T ss_dssp EEEEEEH
T ss_pred CCEEEEH
Confidence 7766653
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.92 E-value=7.4e-25 Score=190.17 Aligned_cols=230 Identities=15% Similarity=0.093 Sum_probs=162.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCE--EEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHY--IIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
+|++|||||||||||+++++.|+++||+ |+.+.|+++.... ...+++++.+|+.+.+.+.++++++|+|||+++...
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~ 80 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-IGGEADVFIGDITDADSINPAFQGIDALVILTSAVP 80 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-TTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-ccCCcEEEEeeeccccccccccccceeeEEEEeecc
Confidence 5799999999999999999999999975 6667787654322 234678999999999999999999999999998653
Q ss_pred Ccc------------cccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCC
Q 017290 103 GMG------------FIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170 (374)
Q Consensus 103 ~~~------------~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~ 170 (374)
... ...........+|+.++.+++..+.....+++.+.|+...+...... ...+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~------------~~~~~~ 148 (252)
T d2q46a1 81 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPL------------NKLGNG 148 (252)
T ss_dssp EECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGG------------GGGGGC
T ss_pred ccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCccc------------cccccc
Confidence 111 11122334566788999999999999998899999987665432110 111223
Q ss_pred chHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHH
Q 017290 171 AYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE 250 (374)
Q Consensus 171 ~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 250 (374)
.|...+...+ .+....+++++++||+.+||+...... . +. +....+ .....+++|++|+|+
T Consensus 149 ~~~~~~~~~~----~~~~~~~~~~~ilRp~~v~g~~~~~~~---~--------~~-~~~~~~---~~~~~~~i~~~Dva~ 209 (252)
T d2q46a1 149 NILVWKRKAE----QYLADSGTPYTIIRAGGLLDKEGGVRE---L--------LV-GKDDEL---LQTDTKTVPRADVAE 209 (252)
T ss_dssp CHHHHHHHHH----HHHHHSSSCEEEEEECEEECSCTTSSC---E--------EE-ESTTGG---GGSSCCEEEHHHHHH
T ss_pred chhhhhhhhh----hhhhcccccceeecceEEECCCcchhh---h--------hh-ccCccc---ccCCCCeEEHHHHHH
Confidence 4444444444 444457899999999999999753211 0 00 000001 123457999999999
Q ss_pred HHHhhhccC--CCCcEEecCCC---ccCHHHHHHHHHHhcC
Q 017290 251 GVLRLTKSD--FREPVNIGSDE---MVSMNEMAEIVLSFED 286 (374)
Q Consensus 251 ~i~~~~~~~--~~~~~~i~~~~---~~s~~e~~~~i~~~~g 286 (374)
+++.+++++ .+++||++++. ..++.|+.+++.++.+
T Consensus 210 a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~ 250 (252)
T d2q46a1 210 VCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTS 250 (252)
T ss_dssp HHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred HHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence 999999876 47799998643 4667788877776654
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.91 E-value=3.7e-24 Score=196.28 Aligned_cols=235 Identities=13% Similarity=0.051 Sum_probs=172.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc---cccccceeEEecccchh-hHhhhccCCCEEEEcccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT---EDMFCHEFHLVDLRVMD-NCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~i~~~~~dl~~~~-~~~~~~~~~d~vi~~a~~ 100 (374)
+.|+|||||||||||++|++.|+++||+|++++|+++.... ....+++++.+|+.|.. .+..++++++.+++....
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~ 81 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 81 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeeccc
Confidence 56899999999999999999999999999999998765322 12346899999998854 466778899998887653
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHH
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASE 180 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E 180 (374)
. ...++..+.+++++|.+.|+++++++||....... ...+...|..+|...|
T Consensus 82 ~-------------~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~---------------~~~~~~~~~~~k~~~~ 133 (350)
T d1xgka_ 82 Q-------------AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY---------------GPWPAVPMWAPKFTVE 133 (350)
T ss_dssp T-------------TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGT---------------SSCCCCTTTHHHHHHH
T ss_pred c-------------cchhhhhhhHHHHHHHHhCCCceEEEeeccccccC---------------CcccchhhhhhHHHHH
Confidence 2 12377888999999999998888888886543221 2234456778888887
Q ss_pred HHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeH-HHHHHHHHhhhccC
Q 017290 181 ELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI-DECVEGVLRLTKSD 259 (374)
Q Consensus 181 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~Dva~~i~~~~~~~ 259 (374)
..+.+ .+++++++|++.+++............ ............+..++..++++++ +|+++++..++...
T Consensus 134 ~~~~~----~~~~~~~vr~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~ 205 (350)
T d1xgka_ 134 NYVRQ----LGLPSTFVYAGIYNNNFTSLPYPLFQM----ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG 205 (350)
T ss_dssp HHHHT----SSSCEEEEEECEEGGGCBSSSCSSCBE----EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHC
T ss_pred HHHHh----hccCceeeeeceeeccccccccccccc----cccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCC
Confidence 77665 679999999999887542211100000 0001111223445567778888886 79999999998654
Q ss_pred ----CCCcEEecCCCccCHHHHHHHHHHhcCCCCCcccCCC
Q 017290 260 ----FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG 296 (374)
Q Consensus 260 ----~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~ 296 (374)
.++.|++++ +.+|+.|+++.+.+++|++.++..+|.
T Consensus 206 ~~~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~v~~~~vp~ 245 (350)
T d1xgka_ 206 PQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVPK 245 (350)
T ss_dssp HHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEECSS
T ss_pred hhhcCCeEEEEeC-CcCCHHHHHHHHHHHHCCcceEEECCH
Confidence 477888886 679999999999999999887776664
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.80 E-value=4.2e-19 Score=153.59 Aligned_cols=222 Identities=16% Similarity=0.103 Sum_probs=154.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEEEEc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHVFNL 97 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi~~ 97 (374)
++|++|||||++-||+++++.|+++|++|++.+|+++........+..++.+|+++.+++.++++ ++|++||+
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnn 83 (248)
T d2d1ya1 4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNN 83 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEe
Confidence 67999999999999999999999999999999998764332333356788999999888777654 79999999
Q ss_pred ccccCCcccc---cCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCC
Q 017290 98 AADMGGMGFI---QSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170 (374)
Q Consensus 98 a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~ 170 (374)
||........ .++.+..+++|+.++..+.+++. +.+-.++|++||...+.. .....
T Consensus 84 AG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~-----------------~~~~~ 146 (248)
T d2d1ya1 84 AAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA-----------------EQENA 146 (248)
T ss_dssp CCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB-----------------CTTBH
T ss_pred CcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccc-----------------ccccc
Confidence 9976432232 23345578899999888887764 344448999999766431 22346
Q ss_pred chHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHH
Q 017290 171 AYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247 (374)
Q Consensus 171 ~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 247 (374)
.|+.+|...+.+.+.++.+ .++++..+.||.+-.+. ....+............+.+..+...+...+|
T Consensus 147 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~---------~~~~~~~~~~~~~~~~~~~~~~pl~R~~~ped 217 (248)
T d2d1ya1 147 AYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA---------VLEAIALSPDPERTRRDWEDLHALRRLGKPEE 217 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH---------HHHHHC--------CHHHHTTSTTSSCBCHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCch---------HHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHH
Confidence 8999999999999888765 47999999999886431 11110000000000000111122345778999
Q ss_pred HHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 248 CVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 248 va~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
+|.++..++... .+.++.+.+|-.-
T Consensus 218 ia~~v~fL~S~~s~~itG~~i~vDGG~ta 246 (248)
T d2d1ya1 218 VAEAVLFLASEKASFITGAILPVDGGMTA 246 (248)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHhCchhcCCCCcEEEcCcCccc
Confidence 999999988543 3677888776543
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.78 E-value=6.9e-18 Score=145.40 Aligned_cols=217 Identities=14% Similarity=0.069 Sum_probs=155.1
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-ccccceeEEecccchhhHhhhcc-------CCCE
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-DMFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
|...+|++|||||++-||+++++.|+++|++|++++|+..+.... ...+.+.+.+|++|.+++.++++ ++|+
T Consensus 1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 80 (242)
T d1ulsa_ 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDG 80 (242)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence 345679999999999999999999999999999999986543322 22356789999999998887764 6899
Q ss_pred EEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 94 VFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 94 vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
+||+||........+ .+.+..+++|+.++..+.+++.. .+..+++++||.... +.
T Consensus 81 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~------------------~~ 142 (242)
T d1ulsa_ 81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYL------------------GN 142 (242)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGG------------------CC
T ss_pred EEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccccc------------------CC
Confidence 999999764332222 34556788999998888876643 333367777765332 12
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
.....|+.+|...+.+.+.++.+ .|+++..+.||.+-.+... ............ .. +...+.
T Consensus 143 ~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~-----~~~~~~~~~~~~-~~---------pl~R~~ 207 (242)
T d1ulsa_ 143 LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA-----KVPEKVREKAIA-AT---------PLGRAG 207 (242)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS-----SSCHHHHHHHHH-TC---------TTCSCB
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhh-----cCCHHHHHHHHh-cC---------CCCCCC
Confidence 23468999999999999988765 4699999999999765421 222233333222 11 123467
Q ss_pred eHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 244 FIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
..+|+|++++.++... .+.++.+.+|..
T Consensus 208 ~pedia~~v~fL~S~~s~~itG~~i~vDGG~t 239 (242)
T d1ulsa_ 208 KPLEVAYAALFLLSDESSFITGQVLFVDGGRT 239 (242)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CHHHHHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence 8899999999988543 367788877654
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.77 E-value=2.4e-18 Score=148.31 Aligned_cols=218 Identities=20% Similarity=0.117 Sum_probs=153.4
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--ccccceeEEecccchhhHhhhcc---CCCEEEEc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--DMFCHEFHLVDLRVMDNCLKVTK---GVDHVFNL 97 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~i~~~~~dl~~~~~~~~~~~---~~d~vi~~ 97 (374)
+.++|++|||||++-||+++++.|+++|++|++++|+.++.... ...++..+.+|++|.+.++++++ ++|++||+
T Consensus 2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnn 81 (242)
T d1cyda_ 2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN 81 (242)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEEC
Confidence 45789999999999999999999999999999999986543221 22357888999999999888886 78999999
Q ss_pred ccccCCccccc---CCcceehhhhHHHHHHHHHHHHh-----CCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 98 AADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRI-----SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 98 a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~-----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
|+......+.+ .+.+..+++|+.++..+.+++.. ....++|++||...+.. ....
T Consensus 82 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~-----------------~~~~ 144 (242)
T d1cyda_ 82 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT-----------------FPNL 144 (242)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------------CTTB
T ss_pred CccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcccc-----------------CCcc
Confidence 99765333323 23455688999998888775532 22348999999765421 1223
Q ss_pred CchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHH
Q 017290 170 DAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFID 246 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 246 (374)
..|+.+|...+.+.+.++.+ .|+++..+.||.+..+..... ..-......... . .+...+...+
T Consensus 145 ~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~-~---------~pl~R~~~pe 211 (242)
T d1cyda_ 145 ITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV---SADPEFARKLKE-R---------HPLRKFAEVE 211 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH---TCCHHHHHHHHH-H---------STTSSCBCHH
T ss_pred ccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhh---cCCHHHHHHHHh-c---------CCCCCCcCHH
Confidence 57999999999999998765 469999999998865421000 000111111111 0 1223567899
Q ss_pred HHHHHHHhhhccC----CCCcEEecCCC
Q 017290 247 ECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 247 Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
|+|.++..++... .+.++.+.+|-
T Consensus 212 eva~~v~fL~S~~s~~itG~~i~vDGG~ 239 (242)
T d1cyda_ 212 DVVNSILFLLSDRSASTSGGGILVDAGY 239 (242)
T ss_dssp HHHHHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred HHHHHHHHHhCchhcCcCCceEEeCcch
Confidence 9999999988653 36778877653
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.76 E-value=8.6e-18 Score=144.26 Aligned_cols=209 Identities=13% Similarity=0.071 Sum_probs=148.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEEEEc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHVFNL 97 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi~~ 97 (374)
++|++|||||++-||+++++.|++.|++|++++|+..... ++..+.+|++|.+++.++++ ++|++||+
T Consensus 6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn 80 (237)
T d1uzma1 6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-----GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN 80 (237)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc-----CceEEEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence 6799999999999999999999999999999999865432 35678899999888877664 78999999
Q ss_pred ccccCCccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCC
Q 017290 98 AADMGGMGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170 (374)
Q Consensus 98 a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~ 170 (374)
||....... ..++.+..+++|+.++..+.+++ ++.+..++|++||..... +.....
T Consensus 81 AG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~-----------------~~~~~~ 143 (237)
T d1uzma1 81 AGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW-----------------GIGNQA 143 (237)
T ss_dssp CSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------------CCH
T ss_pred ecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhcc-----------------CCcccH
Confidence 997643222 22344567889999887776544 455555999999976542 112346
Q ss_pred chHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHH
Q 017290 171 AYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247 (374)
Q Consensus 171 ~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 247 (374)
.|+.+|...+.+.+.++.+ .|+++..+.||.+..+.. .......... .... .+...+...+|
T Consensus 144 ~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~-----~~~~~~~~~~-~~~~---------~pl~R~~~ped 208 (237)
T d1uzma1 144 NYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMT-----RALDERIQQG-ALQF---------IPAKRVGTPAE 208 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-----HHSCHHHHHH-HGGG---------CTTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhh-----hccCHHHHHH-HHhc---------CCCCCCcCHHH
Confidence 8999999999999988765 479999999999865421 0011111111 1111 12235678999
Q ss_pred HHHHHHhhhccC----CCCcEEecCCC
Q 017290 248 CVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 248 va~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
+|++++.++... .+.++.+.+|-
T Consensus 209 vA~~v~fL~S~~s~~itG~~i~vdGG~ 235 (237)
T d1uzma1 209 VAGVVSFLASEDASYISGAVIPVDGGM 235 (237)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHhCchhcCCcCCeEEECCCC
Confidence 999999988653 36778887663
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.76 E-value=8.2e-18 Score=144.86 Aligned_cols=211 Identities=15% Similarity=0.074 Sum_probs=153.2
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
.++|+++||||++-||+++++.|+++|++|++.+|++.+.... ......++.+|++|.++++++++ ++|+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi 83 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 83 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence 4679999999999999999999999999999999987543221 12346788999999998877764 7899
Q ss_pred EEEcccccCCccccc---CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 94 VFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 94 vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
+||+|+......+.+ .+.+..+++|+.++..+.+++ ++.+-.++|++||...+.. .
T Consensus 84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~-----------------~ 146 (244)
T d1nffa_ 84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG-----------------T 146 (244)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------------C
T ss_pred EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccc-----------------c
Confidence 999999765332322 334567889999988887755 3333348999999766421 1
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
.....|+.+|...+.+.+.++.+ .|+++..+.||.+..+.... +.. . . ...+...+.
T Consensus 147 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~--------------~~~-~-~----~~~pl~R~~ 206 (244)
T d1nffa_ 147 VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW--------------VPE-D-I----FQTALGRAA 206 (244)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT--------------SCT-T-C----SCCSSSSCB
T ss_pred ccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhh--------------hhH-H-H----HhccccCCC
Confidence 23468999999999999998865 47999999999887543110 000 0 0 111233578
Q ss_pred eHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 244 FIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
..+|+|.+++.++... .+.++.+.+|..
T Consensus 207 ~p~diA~~v~fL~s~~s~~itG~~i~vDGG~~ 238 (244)
T d1nffa_ 207 EPVEVSNLVVYLASDESSYSTGAEFVVDGGTV 238 (244)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CHHHHHHHHHHHhChhhCCCcCCEEEECCCee
Confidence 9999999999988543 367788876643
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=5.4e-18 Score=146.34 Aligned_cols=217 Identities=17% Similarity=0.097 Sum_probs=153.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--ccccceeEEecccchhhHhhhcc---CCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--DMFCHEFHLVDLRVMDNCLKVTK---GVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~i~~~~~dl~~~~~~~~~~~---~~d~vi~~a 98 (374)
..+|++|||||++-||+++++.|+++|++|++++|+..+.... ...++..+.+|++|.+.++++++ ++|++||+|
T Consensus 5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnA 84 (244)
T d1pr9a_ 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA 84 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecc
Confidence 4779999999999999999999999999999999986543221 12356788999999998888875 789999999
Q ss_pred cccCCccccc---CCcceehhhhHHHHHHHHHHHHh-----CCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCC
Q 017290 99 ADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRI-----SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170 (374)
Q Consensus 99 ~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~-----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~ 170 (374)
+........+ .+.+..+++|+.++..+.+++.. .+..++|++||...... .....
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~-----------------~~~~~ 147 (244)
T d1pr9a_ 85 AVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-----------------VTNHS 147 (244)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------------CTTBH
T ss_pred ccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccc-----------------ccchh
Confidence 9765332222 33455688999988877765432 23348999999765421 12345
Q ss_pred chHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHH
Q 017290 171 AYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247 (374)
Q Consensus 171 ~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 247 (374)
.|+.+|...+.+.+.++.+ .++++..+.||.+..+..... .. -......... . .+.-++...+|
T Consensus 148 ~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~--~~-~~~~~~~~~~-~---------~pl~R~~~pee 214 (244)
T d1pr9a_ 148 VYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT--WS-DPHKAKTMLN-R---------IPLGKFAEVEH 214 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTT--SC-SHHHHHHHHT-T---------CTTCSCBCHHH
T ss_pred hhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhh--cc-ChHHHHHHHh-c---------CCCCCCcCHHH
Confidence 7999999999999988765 479999999999875421100 00 0112222211 1 12235778999
Q ss_pred HHHHHHhhhccC----CCCcEEecCCC
Q 017290 248 CVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 248 va~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
+|.++..++... .+.++.+.+|-
T Consensus 215 vA~~v~fL~S~~a~~itG~~i~vDGG~ 241 (244)
T d1pr9a_ 215 VVNAILFLLSDRSGMTTGSTLPVEGGF 241 (244)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHhCchhCCcCCcEEEECccH
Confidence 999999888653 36777777653
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.76 E-value=1.3e-17 Score=144.12 Aligned_cols=216 Identities=16% Similarity=0.034 Sum_probs=148.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc----ccccceeEEecccchhhHhhhcc-------CCCE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE----DMFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
++|.++||||++-||+++++.|+++|++|++.+|++.+.... ....+..+.+|++|.+++..+++ ++|+
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi 83 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI 83 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999999999999987532211 12256788999999998887754 7999
Q ss_pred EEEcccccCCccccc---CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 94 VFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 94 vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
+||+||......+.+ .+.+..+++|+.++..+.+++ ++.+-.++|++||..... +.
T Consensus 84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~-----------------~~ 146 (247)
T d2ew8a1 84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL-----------------KI 146 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS-----------------CC
T ss_pred EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcc-----------------cC
Confidence 999999865433333 345567889999988887765 334444899999976532 22
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
.....|+.+|...+.+.+.++.+ .++++..+.||.+-.+.... ......... ......+...+.
T Consensus 147 ~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~----~~~~~~~~~---------~~~~~~~l~r~~ 213 (247)
T d2ew8a1 147 EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA----SALSAMFDV---------LPNMLQAIPRLQ 213 (247)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------------------CTTSSSCSCC
T ss_pred cccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccc----cccchhHHH---------HHHHhccCCCCC
Confidence 23468999999999999888765 46999999999987553110 000000000 001111223466
Q ss_pred eHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 244 FIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
..+|+|.+++.++... .+.++.+.+|-
T Consensus 214 ~pedvA~~v~fL~S~~s~~itG~~i~vDGG~ 244 (247)
T d2ew8a1 214 VPLDLTGAAAFLASDDASFITGQTLAVDGGM 244 (247)
T ss_dssp CTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred CHHHHHHHHHHHhCchhcCCcCCeEEECCCE
Confidence 7899999999988643 36777877653
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.75 E-value=3.7e-18 Score=147.92 Aligned_cols=217 Identities=13% Similarity=0.011 Sum_probs=152.7
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+.++|++|||||++-||+++++.|++.|++|++++|+.++.... ....+..+.+|+++.+++.++++
T Consensus 2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (251)
T d1vl8a_ 2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF 81 (251)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999986542211 11245678999999988877764
Q ss_pred -CCCEEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 -GVDHVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|++||+||........ ..+.+..+++|+.++..+.+++. +.+-.++|++||......
T Consensus 82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~------------- 148 (251)
T d1vl8a_ 82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV------------- 148 (251)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccc-------------
Confidence 799999999976433332 23445568899999888887654 344459999998644210
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcH--HHHHHHHhccCCceEeeCCC
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAP--AAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 236 (374)
+......|+.+|...+.+.+.++.+ .|+++..+.||.+-.+... ... ......... ..
T Consensus 149 ---~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~-----~~~~~~~~~~~~~~-~~-------- 211 (251)
T d1vl8a_ 149 ---TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE-----AVFSDPEKLDYMLK-RI-------- 211 (251)
T ss_dssp ---CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH-----HHHTCHHHHHHHHH-TC--------
T ss_pred ---cCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHH-----hccCCHHHHHHHHh-cC--------
Confidence 1122357999999999999988765 4799999999999765311 000 112222221 11
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
+...+...+|+|++++.++... .+.++.+.+|-
T Consensus 212 -pl~R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG~ 248 (251)
T d1vl8a_ 212 -PLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW 248 (251)
T ss_dssp -TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred -CCCCCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcCe
Confidence 1234667899999999888643 36778877653
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.75 E-value=1.4e-17 Score=144.40 Aligned_cols=216 Identities=16% Similarity=0.073 Sum_probs=154.2
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc------cccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT------EDMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+..+.|.+|||||++-||+++++.|+++|++|++++|+...... .....+..+.+|+++.+++.++++
T Consensus 6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 85 (251)
T d2c07a1 6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH 85 (251)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 44578999999999999999999999999999999997653221 112246788999999988877664
Q ss_pred -CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 -GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|++||+|+........+ .+.+..+++|+.++..+.+++ ++.+-.++|++||...+.
T Consensus 86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~-------------- 151 (251)
T d2c07a1 86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT-------------- 151 (251)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--------------
T ss_pred CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcC--------------
Confidence 7899999999765433322 345567889999888777755 334445999999976542
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
+......|+.+|...+.+.+.++.+ .|+++..+.||.+-.+.. ............. . .+
T Consensus 152 ---~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~-----~~~~~~~~~~~~~-~---------~p 213 (251)
T d2c07a1 152 ---GNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMT-----DKISEQIKKNIIS-N---------IP 213 (251)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------CCHHHHHHHHT-T---------CT
T ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccc-----cccCHHHHHHHHh-c---------CC
Confidence 1223468999999999999998765 479999999999976542 1222233333222 1 12
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
...+...+|+|.+++.++... .+.++.+.+|
T Consensus 214 l~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG 248 (251)
T d2c07a1 214 AGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG 248 (251)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence 234778999999999888653 3677777765
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.75 E-value=7.8e-18 Score=146.44 Aligned_cols=229 Identities=14% Similarity=0.058 Sum_probs=155.7
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCC
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
..++|+++||||++-||+++++.|+++|++|++.+|+.+..... ....+..+.+|+++.+++.++++ ++|
T Consensus 2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iD 81 (256)
T d1k2wa_ 2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSID 81 (256)
T ss_dssp TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence 34679999999999999999999999999999999986542221 12246788999999998887764 789
Q ss_pred EEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHH----hCC-CCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASR----ISG-VKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~----~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
++||+|+........+ .+.+..+++|+.++..+.+++. +.+ ..++|++||...+.
T Consensus 82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----------------- 144 (256)
T d1k2wa_ 82 ILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR----------------- 144 (256)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------------
T ss_pred EEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc-----------------
Confidence 9999999765322222 3345568899999888877542 222 34899999976542
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCC-ceEeeCCCcccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTD-KFEMWGDGLQTR 240 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 240 (374)
+......|..+|...+.+.+.++.+ .|+++..+.||.+-.+.- ......+......... ....+....+..
T Consensus 145 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~Plg 219 (256)
T d1k2wa_ 145 GEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHW-----DGVDAKFADYENLPRGEKKRQVGAAVPFG 219 (256)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTH-----HHHHHHHHHHHTCCTTHHHHHHHHHSTTS
T ss_pred ccccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhh-----hhhhhhhhhhccCChHHHHHHHHhcCCCC
Confidence 2223468999999999999888765 479999999998876521 0011111100000000 000000111233
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
.+...+|+|.+++.++... .+..+.+.+|..+|
T Consensus 220 R~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms 256 (256)
T d1k2wa_ 220 RMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS 256 (256)
T ss_dssp SCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred CCcCHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence 5778999999999988543 37788888877654
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=7.7e-18 Score=145.17 Aligned_cols=216 Identities=17% Similarity=0.067 Sum_probs=154.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhcc-------CCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
.++|+++||||++-||+++++.|+++|++|++++|+++...... ......+.+|+++.+++.++++ ++|+
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI 81 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence 36799999999999999999999999999999999865432211 2246778999999888877764 7999
Q ss_pred EEEcccccCCccccc---CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCC
Q 017290 94 VFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPA 166 (374)
Q Consensus 94 vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~ 166 (374)
+||+|+........+ .+.+..+++|+.++..+.+++ ++.+-.++|++||...+. +.
T Consensus 82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~-----------------~~ 144 (243)
T d1q7ba_ 82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM-----------------GN 144 (243)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------------CC
T ss_pred ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcC-----------------CC
Confidence 999999765433333 334556889999988887766 334434899999976542 12
Q ss_pred CCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 167 EPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 167 ~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
.....|..+|...+.+.+.++.+ .++++..+.||.+-.+.. ............. . .+...+.
T Consensus 145 ~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~-----~~~~~~~~~~~~~-~---------~pl~R~~ 209 (243)
T d1q7ba_ 145 GGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMT-----RALSDDQRAGILA-Q---------VPAGRLG 209 (243)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-----HTSCHHHHHHHHT-T---------CTTSSCB
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhh-----hhhhhhHHHHHHh-c---------CCCCCCC
Confidence 23468999999999999998765 479999999998864321 1111222222211 1 1223567
Q ss_pred eHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 244 FIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
..+|+|.++..++... .++++.+.+|-.
T Consensus 210 ~pedvA~~v~fL~S~~s~~itGq~i~vdGG~~ 241 (243)
T d1q7ba_ 210 GAQEIANAVAFLASDEAAYITGETLHVNGGMY 241 (243)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred CHHHHHHHHHHHhCchhcCCcCCeEEECCCeE
Confidence 8999999999988653 367788877643
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.74 E-value=3.8e-17 Score=141.54 Aligned_cols=214 Identities=15% Similarity=0.078 Sum_probs=151.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
++|++|||||++-||++++++|+++|++|++.+|+.++.... ....+.++.+|+++.+++.++++ ++|++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 83 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence 679999999999999999999999999999999986543221 12346789999999998877764 78999
Q ss_pred EEcccccCCccccc---CCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 95 FNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 95 i~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
||+|+........+ ++.+..+++|+.++..+.+++. +.+-.++|++||...+. +..
T Consensus 84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~-----------------~~~ 146 (254)
T d1hdca_ 84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM-----------------GLA 146 (254)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------------CCT
T ss_pred EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcc-----------------ccc
Confidence 99999765433333 2345578899999888877653 34445999999976542 122
Q ss_pred CCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccc-e
Q 017290 168 PQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF-T 243 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i 243 (374)
....|+.+|...+.+.+.++.+ .++++..+.||.+..+ +........ ..-.....+...+ .
T Consensus 147 ~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~-------------~~~~~~~~~--~~~~~~~~pl~R~g~ 211 (254)
T d1hdca_ 147 LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP-------------MTAETGIRQ--GEGNYPNTPMGRVGN 211 (254)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH-------------HHHHHTCCC--STTSCTTSTTSSCB-
T ss_pred chhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc-------------cchhcCHHH--HHHHHhCCCCCCCCC
Confidence 3468999999999999999865 4699999999988643 122221111 0000111112233 3
Q ss_pred eHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 244 FIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
..+|+|.+++.++... .+.++.+.+|-
T Consensus 212 ~PedvA~~v~fL~S~~a~~itG~~i~vDGG~ 242 (254)
T d1hdca_ 212 EPGEIAGAVVKLLSDTSSYVTGAELAVDGGW 242 (254)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CHHHHHHHHHHHhchhhCCCCCceEEeCCCc
Confidence 5799999999988653 37788887764
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.73 E-value=2.1e-17 Score=143.96 Aligned_cols=218 Identities=14% Similarity=0.034 Sum_probs=153.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
.++|+++||||++-||+++++.|+++|++|++.+|+.....+ .....+..+.+|+++.+++.++++
T Consensus 5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 84 (261)
T d1geea_ 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 467999999999999999999999999999999998643211 111246788999999988877764
Q ss_pred CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHH----HhCCC-CeEEEeecccccCCCcccccccCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAS----RISGV-KRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~----~~~~~-~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|++||+|+........+ .+.+..+++|+.++..+.+++ ++.+. .++|++||.....
T Consensus 85 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~-------------- 150 (261)
T d1geea_ 85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI-------------- 150 (261)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--------------
T ss_pred CCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc--------------
Confidence 7899999999765333322 334556889999888877665 34443 3688999975532
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcH-HHHHHHHhccCCceEeeCCCc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAP-AAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+......|+.+|...+.+.+.++.+ .++++..+.||.+..+... .... ...... +.. ..
T Consensus 151 ---~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~----~~~~~~~~~~~-~~~---------~~ 213 (261)
T d1geea_ 151 ---PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA----EKFADPEQRAD-VES---------MI 213 (261)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH----HHHHSHHHHHH-HHT---------TC
T ss_pred ---cCccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHh----hhcCCHHHHHH-HHh---------cC
Confidence 1123468999999999999888765 4799999999998754210 0000 111111 111 11
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
+...+...+|+|++++.++... .+..+.+.+|..+
T Consensus 214 pl~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~sl 252 (261)
T d1geea_ 214 PMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTL 252 (261)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeeC
Confidence 2335678899999999988543 3778888877544
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.73 E-value=2.1e-17 Score=144.11 Aligned_cols=224 Identities=16% Similarity=0.104 Sum_probs=149.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhcc------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
.++|++|||||++-||+++++.|+++|++|++.+|+.....+. ....+.++.+|++|.+++.++++
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 3679999999999999999999999999999999986432111 11246778899999998887764
Q ss_pred -CCCEEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 -GVDHVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|++||+||......+. ..+.+..+++|+.++..+.+++ ++.+-.++|++||.....
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~-------------- 147 (260)
T d1x1ta1 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV-------------- 147 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------
T ss_pred CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccccee--------------
Confidence 789999999976533222 2344567889998887777655 344444999999976642
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHH-hccCCc-eEeeCCC
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKA-LTSTDK-FEMWGDG 236 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~ 236 (374)
+......|+.+|...+.+.+.++.+ .|+++..+.||.+-.+.-. .......... ...... ...+...
T Consensus 148 ---~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (260)
T d1x1ta1 148 ---ASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVE-----KQISALAEKNGVDQETAARELLSEK 219 (260)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------------CHHHH
T ss_pred ---ccCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhh-----hhhhhhhhhcCCChHHHHHHHHHhc
Confidence 1223467999999999999998765 4699999999998655311 1111110000 000000 0000111
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
.+...+...+|+|++++.++... .+.++.+.+|
T Consensus 220 ~Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG 256 (260)
T d1x1ta1 220 QPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp CTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence 12335788999999999888643 3677787765
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.73 E-value=6.6e-18 Score=146.68 Aligned_cols=218 Identities=15% Similarity=0.057 Sum_probs=154.0
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
|..++|++|||||++-||+++++.|+++|++|++++|+....... ....+.++.+|+++.+++.++++
T Consensus 7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~ 86 (255)
T d1fmca_ 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 344679999999999999999999999999999999986532211 12246788999999888877653
Q ss_pred -CCCEEEEcccccCCc--ccccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 -GVDHVFNLAADMGGM--GFIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|++||+||..... +....+.+..+++|+.++..+.+++. +.+-.++|++||...+.
T Consensus 87 g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~--------------- 151 (255)
T d1fmca_ 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN--------------- 151 (255)
T ss_dssp SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC---------------
T ss_pred CCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhc---------------
Confidence 799999999975432 22233455678899999888876553 34444899999976542
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+......|+.+|...+.+.+.++.+ +|+++..+.||.+..+.-. ............. .. +.
T Consensus 152 --~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~----~~~~~e~~~~~~~-~~---------pl 215 (255)
T d1fmca_ 152 --KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK----SVITPEIEQKMLQ-HT---------PI 215 (255)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH----TTCCHHHHHHHHH-TC---------SS
T ss_pred --cccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhh----ccCCHHHHHHHHh-cC---------CC
Confidence 2223468999999999999998865 4799999999998654210 0011222222222 11 12
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
..+...+|+|.+++.++... .+.++.+.+|.
T Consensus 216 ~R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~ 250 (255)
T d1fmca_ 216 RRLGQPQDIANAALFLCSPAASWVSGQILTVSGGG 250 (255)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence 34678899999999988653 36778887764
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.73 E-value=1.1e-17 Score=145.54 Aligned_cols=222 Identities=14% Similarity=0.034 Sum_probs=152.4
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
|+.++|++|||||++-||+++++.|+++|++|++++|++.+..+. ....+.++.+|+++.++++++++
T Consensus 2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~ 81 (258)
T d1ae1a_ 2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF 81 (258)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence 455789999999999999999999999999999999987542211 12245678899999988766543
Q ss_pred --CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 --GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
.+|++||+|+....... ..++....+++|+.++..+.+++. +.+..++|++||.....
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~------------- 148 (258)
T d1ae1a_ 82 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS------------- 148 (258)
T ss_dssp TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS-------------
T ss_pred CCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccc-------------
Confidence 47999999997654322 333455678899999888877653 34445999999977643
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCC-CCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
+......|..+|...+.+.+.++.+ .++++.++.||.+..+.-... .........+......
T Consensus 149 ----~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~---------- 214 (258)
T d1ae1a_ 149 ----ALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVK---------- 214 (258)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHH----------
T ss_pred ----ccccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhc----------
Confidence 2223468999999999999998765 469999999999976532110 0011112222222210
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.+...+...+|+|.+++.++... .+..+.+.+|-
T Consensus 215 ~plgR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~ 252 (258)
T d1ae1a_ 215 TPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGF 252 (258)
T ss_dssp STTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCe
Confidence 11234789999999999988543 35667777653
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.72 E-value=1.9e-17 Score=144.04 Aligned_cols=219 Identities=16% Similarity=0.116 Sum_probs=140.8
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
++.++|++|||||++-||+++++.|++.|++|++++|+..+.... ....+..+.+|+++.+++..+++
T Consensus 4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (259)
T d1xq1a_ 4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF 83 (259)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence 455789999999999999999999999999999999986542221 12256788999999887766542
Q ss_pred --CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 --GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
.+|++||+|+...... ....+.+..+++|+.++..+.+++. +.+-.++|++||.....
T Consensus 84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~------------- 150 (259)
T d1xq1a_ 84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV------------- 150 (259)
T ss_dssp TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------------
T ss_pred CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccc-------------
Confidence 4899999999764322 2233456678899999888877653 34445999999976532
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+......|..+|...+.+.+.++.+ .++++..+.||.+-.+.-. ..........+ ....
T Consensus 151 ----~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~-----~~~~~~~~~~~---------~~~~ 212 (259)
T d1xq1a_ 151 ----SASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAE-----AVYDDEFKKVV---------ISRK 212 (259)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------
T ss_pred ----cccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhh-----hhchHHHHHHH---------HhCC
Confidence 1223468999999999999888765 4799999999998655311 11111111111 1111
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+...+...+|+|.+++.++... .+..+.+.+|-.
T Consensus 213 pl~R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~s 250 (259)
T d1xq1a_ 213 PLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT 250 (259)
T ss_dssp -----CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred CCCCCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCEE
Confidence 2334667899999999888543 366777766643
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.72 E-value=4.9e-17 Score=141.50 Aligned_cols=222 Identities=16% Similarity=0.054 Sum_probs=153.4
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc------
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
++.++|++|||||++-||+++++.|+++|++|++.+|+..+.... ....+.++.+|+++.+++.++++
T Consensus 4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (259)
T d2ae2a_ 4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 83 (259)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence 456789999999999999999999999999999999986543211 12245778899999887776542
Q ss_pred --CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 --GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 --~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+|+........+ ++.+..+++|+.++..+.+++. +.+-.++|++||.....
T Consensus 84 ~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~------------- 150 (259)
T d2ae2a_ 84 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL------------- 150 (259)
T ss_dssp TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS-------------
T ss_pred CCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc-------------
Confidence 4899999999765333322 3345578899999888777653 34444899999976532
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+......|..+|...+.+.+.++.+ .++++..+.||.+-.+..............+..... . .
T Consensus 151 ----~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~-~---------~ 216 (259)
T d2ae2a_ 151 ----AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLID-R---------C 216 (259)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHH-T---------S
T ss_pred ----ccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHh-c---------C
Confidence 1223468999999999999998865 469999999998864321000000011112222221 1 1
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
+...+...+|+|.+++.++... .+..+.+.+|-
T Consensus 217 pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~ 253 (259)
T d2ae2a_ 217 ALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGL 253 (259)
T ss_dssp TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCe
Confidence 2234678899999999888643 36777777653
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.72 E-value=1.9e-17 Score=143.50 Aligned_cols=214 Identities=14% Similarity=0.044 Sum_probs=150.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc-------CCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
++|++|||||++-||+++++.|+++|++|++.+|+.+..... ...++.++.+|++|.+++.++++ ++|
T Consensus 5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 84 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS 84 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence 679999999999999999999999999999999986432211 12256789999999988877664 789
Q ss_pred EEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHH----hCCCC-eEEEeecccccCCCcccccccCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASR----ISGVK-RFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~----~~~~~-~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
++||+|+......+.+ .+.+..+++|+.++..+.+++. +.+.. ++|++||...+-
T Consensus 85 iLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~----------------- 147 (251)
T d1zk4a1 85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV----------------- 147 (251)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS-----------------
T ss_pred EEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec-----------------
Confidence 9999999865433333 3345578899999888887653 34433 789999976532
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh-----hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD-----FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+......|+.+|...+.+.+.++.+ +++++..+.||.+..+.-. ....... ..... ...+.
T Consensus 148 ~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~-----~~~~~~~--~~~~~-------~~~pl 213 (251)
T d1zk4a1 148 GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVD-----DLPGAEE--AMSQR-------TKTPM 213 (251)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHH-----TSTTHHH--HHTST-------TTCTT
T ss_pred cCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHH-----hcCCHHH--HHHHH-------hCCCC
Confidence 1123468999999999998877643 4799999999998654210 0110000 01000 11123
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
..+...+|+|.+++.++... .+..+.+.+|
T Consensus 214 ~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG 247 (251)
T d1zk4a1 214 GHIGEPNDIAYICVYLASNESKFATGSEFVVDGG 247 (251)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCchhCCCcCcEEEECcc
Confidence 35788999999999888643 3667887765
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=6.8e-18 Score=146.02 Aligned_cols=220 Identities=16% Similarity=0.106 Sum_probs=152.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--ccccceeEEecccchhhHhhhcc-------CCCEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--DMFCHEFHLVDLRVMDNCLKVTK-------GVDHVF 95 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi 95 (374)
++|++|||||++-||+++++.|+++|++|++++|+.+..... ...+..++.+|++|.+++.++++ ++|++|
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV 84 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV 84 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 579999999999999999999999999999999986543222 12356788999999998887764 789999
Q ss_pred EcccccCCcc-c---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 96 NLAADMGGMG-F---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 96 ~~a~~~~~~~-~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
|+|+...... . ...+.+..+++|+.++..+.+++. +.+ .++|++||..... +..
T Consensus 85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~-----------------~~~ 146 (250)
T d1ydea1 85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAI-----------------GQA 146 (250)
T ss_dssp ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHH-----------------CCT
T ss_pred ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccc-----------------ccc
Confidence 9999653221 2 223355678899999888877653 333 4899999976532 222
Q ss_pred CCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCC-CCCCcHHHHHHHHhccCCceEeeCCCcccccce
Q 017290 168 PQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWK-GMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (374)
....|+.+|...+.+.+.++.+ .++++..+.||.+-.+.-... .........+..... ..+...+.
T Consensus 147 ~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~----------~~pl~R~g 216 (250)
T d1ydea1 147 QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGML----------AQPLGRMG 216 (250)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHH----------TSTTSSCB
T ss_pred CcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHh----------cCCCCCCC
Confidence 3468999999999999988765 479999999998854310000 000011122222221 11233578
Q ss_pred eHHHHHHHHHhhhccC---CCCcEEecCCCcc
Q 017290 244 FIDECVEGVLRLTKSD---FREPVNIGSDEMV 272 (374)
Q Consensus 244 ~~~Dva~~i~~~~~~~---~~~~~~i~~~~~~ 272 (374)
..+|+|.+++.++... .+.++.+.+|..+
T Consensus 217 ~p~eva~~v~fL~Sda~~itG~~i~vDGG~~l 248 (250)
T d1ydea1 217 QPAEVGAAAVFLASEANFCTGIELLVTGGAEL 248 (250)
T ss_dssp CHHHHHHHHHHHHHHCTTCCSCEEEESTTTTS
T ss_pred CHHHHHHHHHHHhCccCCCcCCeEEECCCccc
Confidence 8999999999887532 3667788776543
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.72 E-value=2.8e-17 Score=142.93 Aligned_cols=220 Identities=16% Similarity=0.076 Sum_probs=153.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhcc-------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
.+|+++||||++-||+++++.|+++|++|.+.+|+....... ....+..+.+|++|.+++..+++
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 82 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 82 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999999999999986542211 11246778899999998877763
Q ss_pred CCCEEEEcccccCCc-cc---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 GVDHVFNLAADMGGM-GF---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~-~~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|++||+||..... .. ...+.+..+++|+.++..+.+++. +.+-.++|++||...+-
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~-------------- 148 (258)
T d1iy8a_ 83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR-------------- 148 (258)
T ss_dssp CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--------------
T ss_pred CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhcc--------------
Confidence 799999999965321 12 333456678999999888887653 33445899999976532
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCc---eEeeCC
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDK---FEMWGD 235 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 235 (374)
+......|+.+|...+.+.+.++.+ .++++..+.||.+..+. ....+..... ... ..-+..
T Consensus 149 ---~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~---------~~~~~~~~~~-~~~~~~~~~~~~ 215 (258)
T d1iy8a_ 149 ---GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM---------VENSMKQLDP-ENPRKAAEEFIQ 215 (258)
T ss_dssp ---BCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH---------HHHHHHHHCT-TCHHHHHHHHHT
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHH---------HHHHHhhcCc-ccHHHHHHHHHh
Confidence 1123468999999999999888765 47999999999986541 1111111100 000 000011
Q ss_pred CcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
..+...+...+|+|.+++.++... .+.++.+.+|..
T Consensus 216 ~~pl~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s 255 (258)
T d1iy8a_ 216 VNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS 255 (258)
T ss_dssp TCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred cCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence 122345778999999999988653 367788887654
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.71 E-value=1.5e-16 Score=139.32 Aligned_cols=223 Identities=12% Similarity=0.077 Sum_probs=153.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc-------CCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
++|++|||||++-||+++++.|+++|++|++++|+....... ....+.++.+|+++.+++..+++ ++|
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 84 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD 84 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence 679999999999999999999999999999999986532211 11245678899999988877764 789
Q ss_pred EEEEcccccCCcc--c---ccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 93 HVFNLAADMGGMG--F---IQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 93 ~vi~~a~~~~~~~--~---~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
++||+||...... . ..++.+..+++|+.++..+.+++. +.+-.++|++||...+...
T Consensus 85 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~-------------- 150 (268)
T d2bgka1 85 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG-------------- 150 (268)
T ss_dssp EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC--------------
T ss_pred eeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccc--------------
Confidence 9999999754221 1 122345568899999888877653 3344489999987654211
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR 240 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (374)
......|+.+|...+.+.+.++.+ .++++..+.||.+-.+.-... ................ ...-
T Consensus 151 --~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~~~~~~~~~~--------~~~g 218 (268)
T d2bgka1 151 --EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDV--FGVDSSRVEELAHQAA--------NLKG 218 (268)
T ss_dssp --TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTS--SSCCHHHHHHHHHHTC--------SSCS
T ss_pred --cccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhh--hcCCHHHHHHHHHhcc--------ccCC
Confidence 111237999999999999988765 479999999999977642211 1111111221111110 0122
Q ss_pred cceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 241 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 241 ~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
.+...+|+|.+++.++... .+.++.+.+|-..+
T Consensus 219 r~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t~~ 255 (268)
T d2bgka1 219 TLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRT 255 (268)
T ss_dssp CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred CCcCHHHHHHHHHHHhChhhCCccCceEEECcCcccC
Confidence 4678999999999988643 37788888775443
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.71 E-value=1e-16 Score=139.41 Aligned_cols=217 Identities=18% Similarity=0.090 Sum_probs=151.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
+|.+|||||++-||+++++.|+++|++|++.+|+....... ....+..+.+|+++.+++..+++ ++|
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD 81 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 81 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 57889999999999999999999999999999986432211 12246788999999998877764 689
Q ss_pred EEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHh------CCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 93 HVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRI------SGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 93 ~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~------~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
++||+||....... ...+.+..+++|+.++..+.+++.. .+..++|++||...+.
T Consensus 82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~---------------- 145 (257)
T d2rhca1 82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ---------------- 145 (257)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTS----------------
T ss_pred EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccc----------------
Confidence 99999997653322 2234556789999999999987753 2334899999876542
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCC------CCCCcHHHHHHHHhccCCceEeeC
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWK------GMEKAPAAFCRKALTSTDKFEMWG 234 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 234 (374)
+......|+.+|...+.+.+.++.+. ++++..+.||.+-.+.-... .........+....
T Consensus 146 -~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~---------- 214 (257)
T d2rhca1 146 -GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRIT---------- 214 (257)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHH----------
T ss_pred -ccccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHH----------
Confidence 12234679999999999999998764 58999999998854310000 00000111111111
Q ss_pred CCcccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
...+.-.+...+|+|.+++.++... .+..+.+.+|
T Consensus 215 ~~~PlgR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG 253 (257)
T d2rhca1 215 ARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 253 (257)
T ss_dssp TTSTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred hcCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence 1112335788999999999988543 3677777765
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.71 E-value=1.1e-16 Score=139.08 Aligned_cols=219 Identities=17% Similarity=0.106 Sum_probs=149.7
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CCCE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GVDH 93 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~d~ 93 (374)
|.+|||||++-||+++++.|+++|++|++.+|++...... ....+..+.+|+++.+++.++++ ++|+
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 81 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 4469999999999999999999999999999986542211 11246778999999998877754 7999
Q ss_pred EEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHH----hCC-CCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 94 VFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASR----ISG-VKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 94 vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~----~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
+||+||........+ .+.+..+++|+.++..+++++. +.+ ..++|++||...+. +
T Consensus 82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-----------------~ 144 (255)
T d1gega_ 82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV-----------------G 144 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------------C
T ss_pred EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc-----------------c
Confidence 999999765333322 3345678899999988877653 333 34799999876532 2
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhcc-CCce----EeeCCCc
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTS-TDKF----EMWGDGL 237 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~ 237 (374)
......|+.+|...+.+.+.++.+ .|+++..+.||.+-.+. ...+....... +... .-+....
T Consensus 145 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (255)
T d1gega_ 145 NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM---------WAEIDRQVSEAAGKPLGYGTAEFAKRI 215 (255)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH---------HHHHHHHHHHHHTCCTTHHHHHHHTTC
T ss_pred CcccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChH---------HhhhhhhhHhhhcccchhHHHHHHhcC
Confidence 223467999999999999988755 47999999999886431 11111111000 0000 0001112
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+..++...+|+|++++.++... .+..+.+.+|-.
T Consensus 216 pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~ 253 (255)
T d1gega_ 216 TLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV 253 (255)
T ss_dssp TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred CCCCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCEE
Confidence 2345788999999999888643 367788877654
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=6.4e-17 Score=139.56 Aligned_cols=222 Identities=18% Similarity=0.123 Sum_probs=152.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-ccccceeEEecccchhhHhhhc---cCCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-DMFCHEFHLVDLRVMDNCLKVT---KGVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~i~~~~~dl~~~~~~~~~~---~~~d~vi~~a~ 99 (374)
..+|++|||||++-||+++++.|+++|++|++++|++.+..+. ...++.....|+.+.+.+.... .++|++||+++
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag 83 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence 3679999999999999999999999999999999987544332 2335677888888766665554 38999999999
Q ss_pred ccCCccccc---CCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCch
Q 017290 100 DMGGMGFIQ---SNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAY 172 (374)
Q Consensus 100 ~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y 172 (374)
........+ .+.+..+++|+.++..+.+++. +.+..++|++||...- +. +......|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~-----------~~-----~~~~~~~Y 147 (245)
T d2ag5a1 84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS-----------VK-----GVVNRCVY 147 (245)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT-----------TB-----CCTTBHHH
T ss_pred ccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc-----------cC-----CccchhHH
Confidence 865432322 2345568899999888877654 3333489999885431 00 22344689
Q ss_pred HHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCC-CCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHH
Q 017290 173 GLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 248 (374)
Q Consensus 173 ~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 248 (374)
+.+|...+.+++.++.+ .|+++..+.||.+-.+...... .............. ..+...+...+|+
T Consensus 148 ~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~----------~~pl~R~~~pedv 217 (245)
T d2ag5a1 148 STTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLK----------RQKTGRFATAEEI 217 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHH----------TCTTSSCEEHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHh----------cCCCCCCcCHHHH
Confidence 99999999999999865 4699999999998754210000 00001111111111 1123357889999
Q ss_pred HHHHHhhhccC----CCCcEEecCCCc
Q 017290 249 VEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 249 a~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
|+++..++..+ .+..+.+.+|..
T Consensus 218 a~~v~fL~s~~s~~iTG~~i~VDGG~s 244 (245)
T d2ag5a1 218 AMLCVYLASDESAYVTGNPVIIDGGWS 244 (245)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred HHHHHHHhChhhCCCcCceEEeCCCcC
Confidence 99999998654 367788877654
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=2.6e-17 Score=142.98 Aligned_cols=220 Identities=13% Similarity=0.046 Sum_probs=149.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc--------cccccceeEEecccchhhHhhhcc-------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT--------EDMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
++|++|||||++-||+++++.|+++|++|++++|+.++... .....+.++.+|+++.++++++++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 57999999999999999999999999999999998653211 112356788999999988877764
Q ss_pred CCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHh----CC---CCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRI----SG---VKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~----~~---~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|++||+|+... ..+.+..+++|+.++..+..++.. .+ ..++|++||...+-
T Consensus 82 ~iDilVnnAg~~~-----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~--------------- 141 (254)
T d2gdza1 82 RLDILVNNAGVNN-----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM--------------- 141 (254)
T ss_dssp CCCEEEECCCCCC-----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS---------------
T ss_pred CcCeecccccccc-----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc---------------
Confidence 7899999999743 345677888999887777665532 22 13699999976542
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHH--H---hhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHH-HhccC-CceEeeCC
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHY--T---KDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRK-ALTST-DKFEMWGD 235 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~--~---~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~ 235 (374)
+......|..+|...+.+.+.+ + ...++++..+.||.+-.+. ...+... ..... +....+.+
T Consensus 142 --~~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~---------~~~~~~~~~~~~~~~~~~~~~~ 210 (254)
T d2gdza1 142 --PVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI---------LESIEKEENMGQYIEYKDHIKD 210 (254)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH---------HHGGGCHHHHGGGGGGHHHHHH
T ss_pred --CCCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChh---------hhhccccccccccHHHHHHHHh
Confidence 2223457999999999988752 2 2357999999999885431 0000000 00000 00000000
Q ss_pred CcccccceeHHHHHHHHHhhhccC--CCCcEEecCCCccCHH
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSD--FREPVNIGSDEMVSMN 275 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~--~~~~~~i~~~~~~s~~ 275 (374)
..+...+...+|+|++++.++.++ .+.++.+.+|..+.++
T Consensus 211 ~~p~~r~~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~~ 252 (254)
T d2gdza1 211 MIKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQ 252 (254)
T ss_dssp HHHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEEC
T ss_pred cCCCCCCcCHHHHHHHHHHHHcCCCCCCCEEEECCCCeeecc
Confidence 011224677899999999999876 3777888877765443
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.70 E-value=3.5e-16 Score=134.04 Aligned_cols=212 Identities=15% Similarity=0.090 Sum_probs=147.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccc-hhhHhhhccCCCEEEEcccccCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRV-MDNCLKVTKGVDHVFNLAADMGG 103 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~-~~~~~~~~~~~d~vi~~a~~~~~ 103 (374)
++|++|||||++-||+++++.|+++|++|++.+|+.+... ..+.+++.+|+++ .+.+.+.+.++|++||+|+....
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~---~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~~ 79 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK---RSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPKA 79 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---hcCCcEEEcchHHHHHHHHHHhCCCcEEEecccccCC
Confidence 5799999999999999999999999999999999864322 2244678889875 34555556689999999996543
Q ss_pred ccc---ccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhH
Q 017290 104 MGF---IQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEK 176 (374)
Q Consensus 104 ~~~---~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK 176 (374)
... ...+.+..+++|+.++..+.+++ ++.+..++|++||..... +......|..+|
T Consensus 80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~-----------------~~~~~~~Y~asK 142 (234)
T d1o5ia_ 80 GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS-----------------PIENLYTSNSAR 142 (234)
T ss_dssp BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------------CCTTBHHHHHHH
T ss_pred cchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccc-----------------cccccccchhHH
Confidence 222 22334556788998877777655 344444899999975542 223345799999
Q ss_pred HHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHH
Q 017290 177 LASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVL 253 (374)
Q Consensus 177 ~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~ 253 (374)
...+.+.+.++.+ .++++..+.||.+-.+.. ...........+. ...+..++...+|+|.+++
T Consensus 143 aal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~-----~~~~~~~~~~~~~---------~~~pl~R~~~pediA~~v~ 208 (234)
T d1o5ia_ 143 MALTGFLKTLSFEVAPYGITVNCVAPGWTETERV-----KELLSEEKKKQVE---------SQIPMRRMAKPEEIASVVA 208 (234)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTH-----HHHSCHHHHHHHH---------TTSTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCeEEeecccCccchhhh-----hhhcCHHHHHHHH---------hcCCCCCCcCHHHHHHHHH
Confidence 9999998888765 479999999998875531 1111111112221 1122345788999999999
Q ss_pred hhhccC----CCCcEEecCCC
Q 017290 254 RLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 254 ~~~~~~----~~~~~~i~~~~ 270 (374)
.++... .++++.+.+|-
T Consensus 209 fL~S~~s~~itG~~i~vDGG~ 229 (234)
T d1o5ia_ 209 FLCSEKASYLTGQTIVVDGGL 229 (234)
T ss_dssp HHHSGGGTTCCSCEEEESTTC
T ss_pred HHhChhhcCCcCcEEEECccc
Confidence 888543 36778887653
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.69 E-value=6e-17 Score=140.46 Aligned_cols=213 Identities=12% Similarity=-0.024 Sum_probs=147.9
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEeccc-chhhHhhhc-----
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLR-VMDNCLKVT----- 88 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~-~~~~~~~~~----- 88 (374)
|+.++|+||||||++-||.+++++|+++|++|+++.|+..+.... ...++.++.+|++ +.+++.+++
T Consensus 1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (254)
T d1sbya1 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 345789999999999999999999999999999998876543211 1235778889997 545555544
Q ss_pred --cCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHh----C---CCCeEEEeecccccCCCcccccccCCC
Q 017290 89 --KGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRI----S---GVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 89 --~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~----~---~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
.++|++|++||.. .....+..+++|+.++..+..++.. . ...++|++||...+.
T Consensus 81 ~~g~iDilvnnAG~~-----~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~------------ 143 (254)
T d1sbya1 81 QLKTVDILINGAGIL-----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN------------ 143 (254)
T ss_dssp HHSCCCEEEECCCCC-----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS------------
T ss_pred HcCCCCEEEeCCCCC-----CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc------------
Confidence 3799999999963 3456778899999998888876643 1 123799999976642
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
+......|+.+|.....+.+.++.+ .++++..+.||.+..+..............+....
T Consensus 144 -----~~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~------------ 206 (254)
T d1sbya1 144 -----AIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL------------ 206 (254)
T ss_dssp -----CCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH------------
T ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhcc------------
Confidence 2223458999999999999888765 47999999999997541000000000000000000
Q ss_pred cccccceeHHHHHHHHHhhhccC-CCCcEEecCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD-FREPVNIGSD 269 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~-~~~~~~i~~~ 269 (374)
..++....+++|++++.+++.. .+.++.+.+|
T Consensus 207 -~~~~~~~~e~va~~~~~~~~~~~tG~vi~vdgG 239 (254)
T d1sbya1 207 -LSHPTQTSEQCGQNFVKAIEANKNGAIWKLDLG 239 (254)
T ss_dssp -TTSCCEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred -ccCCCCCHHHHHHHHHHhhhCCCCCCEEEECCC
Confidence 1123457899999999888765 4667777765
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.69 E-value=1.2e-16 Score=138.36 Aligned_cols=214 Identities=16% Similarity=0.095 Sum_probs=147.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
++|+++||||++-||+++++.|+++|++|++.+|+....... ......++.+|+++.+++.++++ ++|++
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil 84 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence 679999999999999999999999999999999986532211 12245678899999888777664 78999
Q ss_pred EEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 95 FNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 95 i~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
||+|+....... ...+.+..+++|+.++..+.+++.. .+ .++|++||...+. +..
T Consensus 85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~-----------------~~~ 146 (253)
T d1hxha_ 85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWL-----------------PIE 146 (253)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTS-----------------CCT
T ss_pred EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-Cceecccchhhhc-----------------Ccc
Confidence 999997643222 2233566788999988887776543 33 4899999976532 222
Q ss_pred CCCchHHhHHHHHHHHHHHHhh-----hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEee---CCCccc
Q 017290 168 PQDAYGLEKLASEELCKHYTKD-----FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMW---GDGLQT 239 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 239 (374)
....|+.+|...+.+.+.++.+ +++++..+.||.+..+. ..........-... ......
T Consensus 147 ~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~-------------~~~~~~~~~~~~~~~~~~~~~~~ 213 (253)
T d1hxha_ 147 QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM-------------MQASLPKGVSKEMVLHDPKLNRA 213 (253)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH-------------HHHHSCTTCCHHHHBCBTTTBTT
T ss_pred ccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHh-------------HHhhCcchhhHHHHHhCcccccc
Confidence 3458999999999998887754 24889999999886431 11111111000000 001112
Q ss_pred ccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 240 RSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
-.+...+|+|++++.++... .+.++.+.+|
T Consensus 214 gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG 247 (253)
T d1hxha_ 214 GRAYMPERIAQLVLFLASDESSVMSGSELHADNS 247 (253)
T ss_dssp CCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred CCCCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence 25678899999999988643 3677887765
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.69 E-value=1.7e-16 Score=136.65 Aligned_cols=212 Identities=18% Similarity=0.030 Sum_probs=148.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc-------CCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
+.||||||++-||+++++.|+++|++|++.+++.....+. ...++.++.+|++|.+++.++++ ++|
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5799999999999999999999999998876554321111 11246788999999988877654 789
Q ss_pred EEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCC
Q 017290 93 HVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWP 165 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~ 165 (374)
++||+|+......+. ..+.+..+++|+.++..+.+++ ++.+-.++|++||...+- +
T Consensus 82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~-----------------~ 144 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI-----------------G 144 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------------C
T ss_pred ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcC-----------------C
Confidence 999999976543332 2345567889999988887765 334444999999976542 1
Q ss_pred CCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccc
Q 017290 166 AEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSF 242 (374)
Q Consensus 166 ~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (374)
......|+.+|...+.+.+.++.+ .|+++..+.||.+-.+.. ......+...... . .+...+
T Consensus 145 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~-----~~~~~~~~~~~~~-~---------~pl~R~ 209 (244)
T d1edoa_ 145 NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT-----AKLGEDMEKKILG-T---------IPLGRT 209 (244)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHH-----HTTCHHHHHHHHT-S---------CTTCSC
T ss_pred CCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHH-----HHhhHHHHHHHHh-c---------CCCCCC
Confidence 223468999999999999999876 479999999998864321 1111222222221 1 122357
Q ss_pred eeHHHHHHHHHhhhcc-C----CCCcEEecCCC
Q 017290 243 TFIDECVEGVLRLTKS-D----FREPVNIGSDE 270 (374)
Q Consensus 243 i~~~Dva~~i~~~~~~-~----~~~~~~i~~~~ 270 (374)
...+|+|.++..+... . .+.++.+.+|-
T Consensus 210 ~~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG~ 242 (244)
T d1edoa_ 210 GQPENVAGLVEFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp BCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred cCHHHHHHHHHHHHCCchhcCCcCCeEEeCCCe
Confidence 7899999999987533 2 36778887664
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.69 E-value=1.2e-16 Score=137.45 Aligned_cols=214 Identities=14% Similarity=0.035 Sum_probs=149.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCCEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVDHV 94 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d~v 94 (374)
.+|++|||||++-||+++++.|+++|++|++.+|+..+.... ...++.++.+|+++.+.+.++++ ++|++
T Consensus 4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL 83 (241)
T d2a4ka1 4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV 83 (241)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence 579999999999999999999999999999999987543211 12246778999999998877664 69999
Q ss_pred EEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 95 FNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 95 i~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
||+|+......+.+ .+....+++|+.+...+.+++...- -+.++++||.+... ....
T Consensus 84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~------------------~~~~ 145 (241)
T d2a4ka1 84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG------------------AFGL 145 (241)
T ss_dssp EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC------------------HHHH
T ss_pred ccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccc------------------ccCc
Confidence 99999764333323 2345568899999999988765533 22455554443211 1123
Q ss_pred CchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHH
Q 017290 170 DAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFID 246 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 246 (374)
..|+.+|...|.+.+.++.+. ++++.++.||.+-.+.- ............. .. +...+...+
T Consensus 146 ~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~-----~~~~~~~~~~~~~-~~---------p~~r~~~p~ 210 (241)
T d2a4ka1 146 AHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMT-----AGLPPWAWEQEVG-AS---------PLGRAGRPE 210 (241)
T ss_dssp HHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGG-----TTSCHHHHHHHHH-TS---------TTCSCBCHH
T ss_pred cccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHH-----HhhhHhHHHHHHh-CC---------CCCCCcCHH
Confidence 579999999999999998764 59999999999854421 1223333333322 11 123467899
Q ss_pred HHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 247 ECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 247 Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
|+|++++.++... .+.++.+.+|..
T Consensus 211 dva~~v~fL~S~~s~~itG~~i~vDGG~s 239 (241)
T d2a4ka1 211 EVAQAALFLLSEESAYITGQALYVDGGRS 239 (241)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHhcchhCCCcCceEEeCCCcc
Confidence 9999999988653 367788877654
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.68 E-value=1.8e-16 Score=139.23 Aligned_cols=221 Identities=11% Similarity=0.034 Sum_probs=147.4
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc-------CCC
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK-------GVD 92 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~-------~~d 92 (374)
..++|++|||||++-||+++++.|+++|++|++++|+.++..+. ....+..+.+|+++.+++.++++ ++|
T Consensus 2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 81 (276)
T d1bdba_ 2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKID 81 (276)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcc
Confidence 35679999999999999999999999999999999986543222 12356788999999888877653 789
Q ss_pred EEEEcccccCCcccc----cC----CcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCC
Q 017290 93 HVFNLAADMGGMGFI----QS----NHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~----~~----~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++||+|+........ .. ..+..+++|+.++..+.+++ ++.+ .++|++||...+-
T Consensus 82 ilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~------------- 147 (276)
T d1bdba_ 82 TLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFY------------- 147 (276)
T ss_dssp EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTS-------------
T ss_pred cccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhcc-------------
Confidence 999999965321111 11 24566889998887777665 3333 3788888865432
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhhhC--CcEEEEeeCcccCCCCCCCC----CCCcHHHHHHHHhccCCceEeeC
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDFG--IECRVGRFHNIYGPFGTWKG----MEKAPAAFCRKALTSTDKFEMWG 234 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 234 (374)
+......|+.+|...+.+.+.++.+.+ +++..+.||.+-.+.-.... ........+...+.
T Consensus 148 ----~~~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~--------- 214 (276)
T d1bdba_ 148 ----PNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLK--------- 214 (276)
T ss_dssp ----TTSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHT---------
T ss_pred ----CCCCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHH---------
Confidence 112235799999999999988886643 88999999998654211100 00000011111111
Q ss_pred CCcccccceeHHHHHHHHHhhhcc---C--CCCcEEecCCC
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKS---D--FREPVNIGSDE 270 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~---~--~~~~~~i~~~~ 270 (374)
...+.-.+...+|+|.+++.++.. . .+..+++.+|-
T Consensus 215 ~~~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~ 255 (276)
T d1bdba_ 215 SVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGL 255 (276)
T ss_dssp TTCTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred hcCCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcCh
Confidence 111233466789999998887642 2 37788887763
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.68 E-value=3.2e-16 Score=136.38 Aligned_cols=219 Identities=11% Similarity=-0.046 Sum_probs=146.6
Q ss_pred CCCCCeEEEEcCcc--hhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc------
Q 017290 23 PSEKLRISVTGAGG--FIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 23 ~~~~~~ilItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
+.++|++|||||+| -||++++++|+++|++|++.+|++...... .......+.+|+++.++++.+++
T Consensus 5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (256)
T d1ulua_ 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF 84 (256)
T ss_dssp CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence 35789999999998 699999999999999999888875432111 11245678999999988877764
Q ss_pred -CCCEEEEcccccCCc-------ccccCCcceehhhhHHHHHHHHHHHHhCCC--CeEEEeecccccCCCcccccccCCC
Q 017290 90 -GVDHVFNLAADMGGM-------GFIQSNHSVIMYNNTMISFNMLEASRISGV--KRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~--~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|++||+|+..... +....+....+++|+.++..+.+++...-. .++|++||.....
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~------------ 152 (256)
T d1ulua_ 85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK------------ 152 (256)
T ss_dssp SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS------------
T ss_pred CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcC------------
Confidence 789999999864321 111122334677888888888877654321 2799999976542
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
+......|+.+|...+.+.+.++.+ +|+++..+.||.+..+..... ............ ..
T Consensus 153 -----~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~---~~~~~~~~~~~~-~~-------- 215 (256)
T d1ulua_ 153 -----VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI---PGFTKMYDRVAQ-TA-------- 215 (256)
T ss_dssp -----BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------CHHHHHHHHH-HS--------
T ss_pred -----CCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccch---hhhHHHHHHHHh-cC--------
Confidence 1223468999999999999988865 479999999999876542211 011122222211 11
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+...+...+|+|.+++.++... .+.++.+.+|..
T Consensus 216 -pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~ 253 (256)
T d1ulua_ 216 -PLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH 253 (256)
T ss_dssp -TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred -CCCCCcCHHHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence 1234678899999999988653 367788877654
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.68 E-value=3.2e-16 Score=136.56 Aligned_cols=223 Identities=13% Similarity=0.016 Sum_probs=152.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
-++|++|||||++-||+++++.|+++|++|++++|+..+..+. ...++..+.+|+++.+++.++++
T Consensus 7 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (260)
T d1h5qa_ 7 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG 86 (260)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4679999999999999999999999999999999987653321 12246788999999998877764
Q ss_pred CCCEEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHHH----h-CCCCeEEEeecccccCCCcccccccCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASR----I-SGVKRFFYASSACIYPEFKQLETNVSLKES 161 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~----~-~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~ 161 (374)
++|++||+|+........ ..+.+..+++|+.++..+.+++. + .+..+++..||...+...... +.
T Consensus 87 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~-----~~-- 159 (260)
T d1h5qa_ 87 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS-----LN-- 159 (260)
T ss_dssp SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-----TT--
T ss_pred CCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc-----cc--
Confidence 789999999975432222 23345578899988877776543 2 233366666665544322110 00
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ 238 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (374)
.......|+.+|...+.+.+.++.+ .|+++..+.||.+-.+.. ............. .. +
T Consensus 160 ---~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~-----~~~~~~~~~~~~~-~~---------p 221 (260)
T d1h5qa_ 160 ---GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQT-----AHMDKKIRDHQAS-NI---------P 221 (260)
T ss_dssp ---EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG-----GGSCHHHHHHHHH-TC---------T
T ss_pred ---cCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcch-----hccCHHHHHHHHh-cC---------C
Confidence 1123467999999999999888765 479999999999865431 1122223232221 11 1
Q ss_pred cccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 239 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 239 ~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
...+...+|+|.+++.++... .+.++.+.+|..
T Consensus 222 l~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~ 258 (260)
T d1h5qa_ 222 LNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL 258 (260)
T ss_dssp TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred CCCCcCHHHHHHHHHHHhcchhCCCcCceEEECCCee
Confidence 234677899999999888553 367788877653
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.68 E-value=1.5e-16 Score=138.53 Aligned_cols=218 Identities=20% Similarity=0.174 Sum_probs=149.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------CC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------GV 91 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~~ 91 (374)
++|++|||||++-||+++++.|++.|++|++++|+....... ....+..+.+|+++.+++.++++ ++
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 579999999999999999999999999999999986532211 12246788999999888877764 79
Q ss_pred CEEEEcccccCCc-c---cccCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCCC
Q 017290 92 DHVFNLAADMGGM-G---FIQSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESDA 163 (374)
Q Consensus 92 d~vi~~a~~~~~~-~---~~~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~ 163 (374)
|++||+||..... . ....+.+..+++|+.++..+.+++. +.+-.++|++||...+..
T Consensus 84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~--------------- 148 (260)
T d1zema1 84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG--------------- 148 (260)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC---------------
T ss_pred CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccC---------------
Confidence 9999999975321 1 2233455678899999888877653 333349999999765432
Q ss_pred CCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCC-----------CCCCCCcHHHHHHHHhccCCc
Q 017290 164 WPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGT-----------WKGMEKAPAAFCRKALTSTDK 229 (374)
Q Consensus 164 ~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 229 (374)
......|+.+|...+.+.+.++.+ .|+++..+.||.+-.+.-. ..........+...... .
T Consensus 149 --~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 223 (260)
T d1zema1 149 --PPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIG-S-- 223 (260)
T ss_dssp --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHH-T--
T ss_pred --CcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHh-c--
Confidence 122358999999999999988765 4699999999998754100 00000111111111111 1
Q ss_pred eEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 230 FEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 230 ~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
.+...+...+|+|.+++.++... .+..+.+.+|
T Consensus 224 -------~Pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 224 -------VPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp -------STTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred -------CCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence 12234677899999999988653 3566776653
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.67 E-value=3.1e-16 Score=137.57 Aligned_cols=224 Identities=10% Similarity=0.012 Sum_probs=150.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---------ccccceeEEecccchhhHhhhcc------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
++|+++||||++-||+++++.|++.|++|++++|+.++.... ...++..+.+|+++.+++.++++
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 82 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 579999999999999999999999999999999986532211 12346789999999988877664
Q ss_pred -CCCEEEEcccccCCc--ccc---cCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCC
Q 017290 90 -GVDHVFNLAADMGGM--GFI---QSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~--~~~---~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|++||+|+..... ... ..+.+..+++|+.++..+.+++. +.+-.+++++||.....
T Consensus 83 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~------------ 150 (274)
T d1xhla_ 83 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ------------ 150 (274)
T ss_dssp SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS------------
T ss_pred CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc------------
Confidence 789999999864321 111 12345678899999888877653 34444777777754322
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
+......|+.+|...+.+.+.++.+ .|+++..+.||.+-.+..............+...+.... ..
T Consensus 151 -----~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~------~~ 219 (274)
T d1xhla_ 151 -----AHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRK------EC 219 (274)
T ss_dssp -----CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT------TT
T ss_pred -----cCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHH------cC
Confidence 1123457999999999999888755 479999999999965421000000011111111111110 11
Q ss_pred cccccceeHHHHHHHHHhhhcc---C--CCCcEEecCCCc
Q 017290 237 LQTRSFTFIDECVEGVLRLTKS---D--FREPVNIGSDEM 271 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~---~--~~~~~~i~~~~~ 271 (374)
.+...+...+|+|.+++.++.. . .+..+.+.+|..
T Consensus 220 iPlgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~ 259 (274)
T d1xhla_ 220 IPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST 259 (274)
T ss_dssp CTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred CCCCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence 1233577899999999988852 2 367888887754
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.67 E-value=2.8e-16 Score=137.17 Aligned_cols=219 Identities=11% Similarity=0.022 Sum_probs=143.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---------ccccceeEEecccchhhHhhhcc------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
++|.+|||||++-||++++++|+++|++|++++|+....... ...++.++.+|+++.+++.++++
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 83 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 578999999999999999999999999999999986542211 12347889999999988877764
Q ss_pred -CCCEEEEcccccCCcc-------cccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccc-cCCCccccccc
Q 017290 90 -GVDHVFNLAADMGGMG-------FIQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACI-YPEFKQLETNV 156 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~-------~~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~v-y~~~~~~~~~~ 156 (374)
++|++||+|+...... .+.++++..+++|+.++..+.+++.. .+ .++|+++|... +.
T Consensus 84 g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~--------- 153 (264)
T d1spxa_ 84 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLH--------- 153 (264)
T ss_dssp SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSS---------
T ss_pred CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Ccceeeeeeccccc---------
Confidence 7999999999642111 11223455788899998888776542 33 25666655432 21
Q ss_pred CCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCC----CCCcHHHHHHHHhccCCc
Q 017290 157 SLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKG----MEKAPAAFCRKALTSTDK 229 (374)
Q Consensus 157 ~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~ 229 (374)
+......|+.+|...+.+.+.++.+ .|+++..+.||.+-.+...... ..............
T Consensus 154 --------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---- 221 (264)
T d1spxa_ 154 --------ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKE---- 221 (264)
T ss_dssp --------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHH----
T ss_pred --------cCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHh----
Confidence 1122357999999999999888765 4799999999998654321100 00001111111111
Q ss_pred eEeeCCCcccccceeHHHHHHHHHhhhccC-----CCCcEEecCCCc
Q 017290 230 FEMWGDGLQTRSFTFIDECVEGVLRLTKSD-----FREPVNIGSDEM 271 (374)
Q Consensus 230 ~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~-----~~~~~~i~~~~~ 271 (374)
..+...+...+|+|++++.++..+ .+..+.+.+|..
T Consensus 222 ------~~Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s 262 (264)
T d1spxa_ 222 ------CVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS 262 (264)
T ss_dssp ------HCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred ------cCCCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence 011234678899999999888532 367788877654
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=1.5e-16 Score=136.76 Aligned_cols=200 Identities=15% Similarity=0.017 Sum_probs=144.1
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
...+|.++||||++-||++++++|+++|++|++++|+..+.... ...++..+.+|++|.+.+..+++
T Consensus 4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g 83 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG 83 (244)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 35779999999999999999999999999999999987542211 12246788999999988877664
Q ss_pred CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
++|++||+|+........+ ...+..+++|+.++..+.+++ ++.+-.++|++||...+...
T Consensus 84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~------------- 150 (244)
T d1yb1a_ 84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV------------- 150 (244)
T ss_dssp CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH-------------
T ss_pred CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCC-------------
Confidence 7999999999865322222 234567889999988777654 44555589999998764321
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh------hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD------FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
.....|..+|...+.+.+.++.+ .|+.+..+.||.+--+... .. .
T Consensus 151 ----~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~-----~~--------------------~ 201 (244)
T d1yb1a_ 151 ----PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK-----NP--------------------S 201 (244)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT-----CT--------------------H
T ss_pred ----CCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhh-----Cc--------------------C
Confidence 12357999999999999988764 3689999999988543210 00 0
Q ss_pred cccccceeHHHHHHHHHhhhccCCCCcE
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSDFREPV 264 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~~~~~~ 264 (374)
......+..+|+|+.++..+..+...++
T Consensus 202 ~~~~~~~~pe~va~~i~~~~~~~~~~i~ 229 (244)
T d1yb1a_ 202 TSLGPTLEPEEVVNRLMHGILTEQKMIF 229 (244)
T ss_dssp HHHCCCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred ccccCCCCHHHHHHHHHHHHhcCCcEEE
Confidence 0112345678999999888776654433
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=3.5e-16 Score=138.61 Aligned_cols=220 Identities=12% Similarity=0.037 Sum_probs=151.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-----------cccccceeEEecccchhhHhhhcc---
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-----------EDMFCHEFHLVDLRVMDNCLKVTK--- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~~i~~~~~dl~~~~~~~~~~~--- 89 (374)
.++|++|||||++-||+++++.|+++|++|++.+|+..+... .....+..+.+|+++.+++.++++
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~ 89 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 89 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence 478999999999999999999999999999999998653211 112256788999999998877664
Q ss_pred ----CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHh----CCCCeEEEeecccccCCCcccccccCC
Q 017290 90 ----GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRI----SGVKRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 90 ----~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
++|++||+|+....... ...+.+..+++|+.++..+.+++.. .+..++|++|+....
T Consensus 90 ~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~------------ 157 (297)
T d1yxma1 90 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA------------ 157 (297)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT------------
T ss_pred HHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccc------------
Confidence 78999999997543222 2234555788999999888877643 333467877664322
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCC
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
.......|+.+|...+.+.+.++.+ .|+++..+.||.+..+..... .......+..... .
T Consensus 158 ------~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~----------~ 220 (297)
T d1yxma1 158 ------GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVEN-YGSWGQSFFEGSF----------Q 220 (297)
T ss_dssp ------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTT-SGGGGGGGGTTGG----------G
T ss_pred ------cccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhh-ccccCHHHHHHHH----------h
Confidence 1123467999999999999998865 479999999999976531100 0000001111100 1
Q ss_pred CcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
..+...+...+|+|.+++.++... .+.++.+.+|..+
T Consensus 221 ~~plgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~sl 261 (297)
T d1yxma1 221 KIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSL 261 (297)
T ss_dssp GSTTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred cCCCCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcChhh
Confidence 112235678899999999988653 3778888876543
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.66 E-value=1.1e-15 Score=131.15 Aligned_cols=193 Identities=14% Similarity=0.096 Sum_probs=140.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCE-------EEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc----
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHY-------IIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK---- 89 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~---- 89 (374)
+.||||||++-||+++++.|+++|++ |++.+|+....... ....+..+.+|++|.+++.++++
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 34899999999999999999999986 88888886542211 12245778999999998877664
Q ss_pred ---CCCEEEEcccccCCcccc---cCCcceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCC
Q 017290 90 ---GVDHVFNLAADMGGMGFI---QSNHSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 ---~~d~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
++|++||+|+........ ..+.+..+++|+.++..+.+++. +.+-.++|++||...+..
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~----------- 150 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA----------- 150 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCC-----------
Confidence 789999999976533332 23445678899999888777653 444448999999766431
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
......|+.+|...+.+.+.++.+ .|+++..+.||.+-.+.-.. + ..
T Consensus 151 ------~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~----------------------~--~~ 200 (240)
T d2bd0a1 151 ------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK----------------------V--DD 200 (240)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC----------------------C--CS
T ss_pred ------CCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh----------------------c--CH
Confidence 223468999999999999888765 47999999999986542110 0 01
Q ss_pred cccccceeHHHHHHHHHhhhccCC
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~~ 260 (374)
.....+...+|+|++++.++..+.
T Consensus 201 ~~~~~~~~PedvA~~v~~l~s~~~ 224 (240)
T d2bd0a1 201 EMQALMMMPEDIAAPVVQAYLQPS 224 (240)
T ss_dssp TTGGGSBCHHHHHHHHHHHHTSCT
T ss_pred hhHhcCCCHHHHHHHHHHHHcCCc
Confidence 112345678999999999988764
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=6.5e-16 Score=134.12 Aligned_cols=206 Identities=16% Similarity=0.046 Sum_probs=140.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhcc-------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
+.|.+|||||++-||+++++.|+++|++|++.+|+..+.... ....+.++.+|+++.+++.++++
T Consensus 9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g 88 (257)
T d1xg5a_ 9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 88 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999999999986542211 11246778999999988877654
Q ss_pred CCCEEEEcccccCCcc---cccCCcceehhhhHHHHHHHHHHH----HhCC--CCeEEEeecccccCCCcccccccCCCC
Q 017290 90 GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMLEAS----RISG--VKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~a~----~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+|+...... ....+.+..+++|+.+...+.+++ ++.+ -.++|++||.+.+...
T Consensus 89 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~----------- 157 (257)
T d1xg5a_ 89 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL----------- 157 (257)
T ss_dssp CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC-----------
T ss_pred CCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC-----------
Confidence 7999999999764322 223344556888988887776654 3333 2499999997654221
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh-----hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCC
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD-----FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGD 235 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
|......|+.+|...+.+.+.++.+ .++++..+.||.+-.+..... .......+..
T Consensus 158 ----p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~-~~~~~~~~~~-------------- 218 (257)
T d1xg5a_ 158 ----PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKL-HDKDPEKAAA-------------- 218 (257)
T ss_dssp ----SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHH-TTTCHHHHHH--------------
T ss_pred ----CCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhc-ChhhHHHHHh--------------
Confidence 1122356999999999999888754 468999999987754310000 0001111100
Q ss_pred CcccccceeHHHHHHHHHhhhccCC
Q 017290 236 GLQTRSFTFIDECVEGVLRLTKSDF 260 (374)
Q Consensus 236 ~~~~~~~i~~~Dva~~i~~~~~~~~ 260 (374)
......++..+|+|++++.++..+.
T Consensus 219 ~~~~~r~~~pedvA~~v~fL~s~~a 243 (257)
T d1xg5a_ 219 TYEQMKCLKPEDVAEAVIYVLSTPA 243 (257)
T ss_dssp HHC---CBCHHHHHHHHHHHHHSCT
T ss_pred cCCCCCCcCHHHHHHHHHHHhCChh
Confidence 0122346789999999999987763
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.65 E-value=1.1e-15 Score=133.87 Aligned_cols=224 Identities=13% Similarity=0.055 Sum_probs=147.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc---------ccccceeEEecccchhhHhhhcc------
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE---------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
++|++|||||++-||+++++.|+++|++|++.+|+..+.... ....+..+.+|+++.+++..+++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 83 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 83 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 579999999999999999999999999999999986532211 12246789999999988877664
Q ss_pred -CCCEEEEcccccCCcccc----cC---CcceehhhhHHHHHHHHHHHHh----CCCCeEEEeec-ccccCCCccccccc
Q 017290 90 -GVDHVFNLAADMGGMGFI----QS---NHSVIMYNNTMISFNMLEASRI----SGVKRFFYASS-ACIYPEFKQLETNV 156 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~~----~~---~~~~~~~~n~~~~~~ll~a~~~----~~~~~~i~~Ss-~~vy~~~~~~~~~~ 156 (374)
++|++||+||......+. +. .....+++|+.++..+.+++.. .+- .+|+++| .+...
T Consensus 84 g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g-~iI~~~Ss~a~~~--------- 153 (272)
T d1xkqa_ 84 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKG-EIVNVSSIVAGPQ--------- 153 (272)
T ss_dssp SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEECCGGGSSS---------
T ss_pred CCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCC-ccccccchhcccc---------
Confidence 789999999975422111 11 1344577899988888776533 322 4555555 33221
Q ss_pred CCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEee
Q 017290 157 SLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMW 233 (374)
Q Consensus 157 ~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (374)
+......|+.+|...+.+.+.++.+ .++++..+.||.+-.+.-....................
T Consensus 154 --------~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~------ 219 (272)
T d1xkqa_ 154 --------AQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASH------ 219 (272)
T ss_dssp --------CCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC------
T ss_pred --------CCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHH------
Confidence 1122457999999999999988765 47999999999886542100000000111111111110
Q ss_pred CCCcccccceeHHHHHHHHHhhhcc---C--CCCcEEecCCCcc
Q 017290 234 GDGLQTRSFTFIDECVEGVLRLTKS---D--FREPVNIGSDEMV 272 (374)
Q Consensus 234 ~~~~~~~~~i~~~Dva~~i~~~~~~---~--~~~~~~i~~~~~~ 272 (374)
....+...+...+|+|++++.++.. . .+.++.+.+|..+
T Consensus 220 ~~~~PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l 263 (272)
T d1xkqa_ 220 KECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL 263 (272)
T ss_dssp TTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred hcCCCCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence 1112233577899999999988742 2 3677888877654
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.65 E-value=8.1e-16 Score=133.23 Aligned_cols=217 Identities=12% Similarity=0.036 Sum_probs=146.6
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-------CCCEEEEcccc
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-------GVDHVFNLAAD 100 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-------~~d~vi~~a~~ 100 (374)
++|||||++-||+.+++.|++.|++|.+.+|+.+...+.......+..+|+.+.+++.++++ ++|++||+|+.
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~ 81 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF 81 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence 58999999999999999999999999999988665433322233455677777766655543 79999999986
Q ss_pred cCCc-cccc---CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCch
Q 017290 101 MGGM-GFIQ---SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAY 172 (374)
Q Consensus 101 ~~~~-~~~~---~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y 172 (374)
.... ...+ ++.+..+++|+.++..+.+++ ++.+-.++|++||...+.. ......|
T Consensus 82 ~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~-----------------~~~~~~Y 144 (252)
T d1zmta1 82 APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP-----------------WKELSTY 144 (252)
T ss_dssp CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC-----------------CTTCHHH
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccc-----------------ccccccc
Confidence 5321 1222 234556788988887777665 3444458999999765431 1223579
Q ss_pred HHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCC---CCcHHHHHHHHhccCCceEeeCCCcccccceeHH
Q 017290 173 GLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGM---EKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFID 246 (374)
Q Consensus 173 ~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 246 (374)
..+|...+.+.+.++.+ .++++..+.||.+-.+....... ............. . .+...+...+
T Consensus 145 ~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~-~---------~pl~R~g~pe 214 (252)
T d1zmta1 145 TSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKK-V---------TALQRLGTQK 214 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHH-H---------SSSSSCBCHH
T ss_pred ccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHh-c---------CCCCCCcCHH
Confidence 99999999999988765 47999999999997653211100 0001112222211 0 1122467899
Q ss_pred HHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 247 ECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 247 Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
|+|.+++.++... .+..+.+.+|-.
T Consensus 215 dvA~~v~fL~S~~s~~iTG~~i~vdGG~~ 243 (252)
T d1zmta1 215 ELGELVAFLASGSCDYLTGQVFWLAGGFP 243 (252)
T ss_dssp HHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred HHHHHHHHHhCchhcCCcCCeEEECCCce
Confidence 9999999998654 367888877643
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.64 E-value=1.9e-15 Score=132.49 Aligned_cols=223 Identities=16% Similarity=0.039 Sum_probs=150.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-------cccccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-------EDMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
.++|++|||||++-||+++++.|+++|++|++++|+..+..+ .....+.++.+|+++.+++.++++
T Consensus 16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g 95 (272)
T d1g0oa_ 16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG 95 (272)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence 467999999999999999999999999999999887643211 112246788899999888877764
Q ss_pred CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKESDAW 164 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~ 164 (374)
++|++||+++......... .+....+++|+.++..+.+++...= -.++++++|......
T Consensus 96 ~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~---------------- 159 (272)
T d1g0oa_ 96 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK---------------- 159 (272)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS----------------
T ss_pred CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccc----------------
Confidence 7899999999765332222 2345567889999988888776422 237777776532110
Q ss_pred CCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCC------CCCCCCCc-HHHHHHHHhccCCceEeeC
Q 017290 165 PAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFG------TWKGMEKA-PAAFCRKALTSTDKFEMWG 234 (374)
Q Consensus 165 ~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 234 (374)
+......|+.+|...+.+++.++.+ .|+++..+.||.+-.+.- ........ ...........
T Consensus 160 ~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 231 (272)
T d1g0oa_ 160 AVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ-------- 231 (272)
T ss_dssp SCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH--------
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHc--------
Confidence 2233467999999999999888765 479999999999864310 00000000 11111111110
Q ss_pred CCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 235 DGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 235 ~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
..+.-.+...+|+|.++..++... .+.+..+.+|..
T Consensus 232 -~~PlgR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~~ 271 (272)
T d1g0oa_ 232 -WSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGAC 271 (272)
T ss_dssp -SCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred -cCCCCCCcCHHHHHHHHHHHhCchhcCccCceEeECCCCC
Confidence 111235788999999999988653 366778777643
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.64 E-value=2.5e-15 Score=130.68 Aligned_cols=221 Identities=15% Similarity=0.100 Sum_probs=148.1
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
|..+|++|||||++-||.++++.|+++|++|++..++..+..+. ....+..+.+|++|.+++..+++
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 82 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999877665432111 11246789999999888877664
Q ss_pred -CCCEEEEcccccCCccc---ccCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecc-cccCCCcccccccCCCCCC
Q 017290 90 -GVDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSA-CIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~-~vy~~~~~~~~~~~~~e~~ 162 (374)
++|++||+|+....... ...+.+..+++|+.+...+++++...= -.++++++|. +.+.
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~--------------- 147 (259)
T d1ja9a_ 83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT--------------- 147 (259)
T ss_dssp SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC---------------
T ss_pred CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccccc---------------
Confidence 78999999997643322 222345568899999888888775421 1256556553 3221
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCC-------CCCCCCCCcHHHHHHHHhccCCceEe
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPF-------GTWKGMEKAPAAFCRKALTSTDKFEM 232 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (374)
+......|+.+|...+.+++.++.+ .++++..+.||.+-.+. .............+...+...
T Consensus 148 --~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 220 (259)
T d1ja9a_ 148 --GIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM----- 220 (259)
T ss_dssp --SCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHT-----
T ss_pred --CCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhC-----
Confidence 1122357999999999999888765 47999999999985321 000001111122222222211
Q ss_pred eCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 233 WGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 233 ~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
.+...+...+|+|++++.++... .+.++.+.+|
T Consensus 221 ----~pl~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG 257 (259)
T d1ja9a_ 221 ----NPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 257 (259)
T ss_dssp ----STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ----CCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCC
Confidence 12345788999999999988764 3667777665
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.63 E-value=3.9e-15 Score=128.67 Aligned_cols=166 Identities=16% Similarity=0.075 Sum_probs=120.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHh---CCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc--------
Q 017290 26 KLRISVTGAGGFIASHIARRLKS---EGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK-------- 89 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~-------- 89 (374)
||+||||||++-||+++++.|++ +|++|++.+|+.++.... ...++.++.+|++|.+.+..+++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 68899999999999999999974 689999999998764322 12367889999999887765532
Q ss_pred -CCCEEEEcccccCCcc-cccCC---cceehhhhHHHHHHHHHHHH----h-----------CCCCeEEEeecccccCCC
Q 017290 90 -GVDHVFNLAADMGGMG-FIQSN---HSVIMYNNTMISFNMLEASR----I-----------SGVKRFFYASSACIYPEF 149 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~-~~~~~---~~~~~~~n~~~~~~ll~a~~----~-----------~~~~~~i~~Ss~~vy~~~ 149 (374)
++|++||+|+...... ..+.+ .+..+++|+.++..+++++. + .+..++|++||....-..
T Consensus 82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~ 161 (248)
T d1snya_ 82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG 161 (248)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence 6899999999754321 22222 44578899999888877653 2 123489999996432110
Q ss_pred cccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCC
Q 017290 150 KQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGP 205 (374)
Q Consensus 150 ~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~ 205 (374)
. +......|+.+|.....+.+.++.+ .++.+..+.||.+--+
T Consensus 162 ~--------------~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~ 206 (248)
T d1snya_ 162 N--------------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 206 (248)
T ss_dssp C--------------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred C--------------CCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence 0 2223457999999999998888654 4799999999988644
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.63 E-value=4.8e-15 Score=129.01 Aligned_cols=201 Identities=13% Similarity=0.028 Sum_probs=142.0
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc---------ccccceeEEecccchhhHhhhcc------C
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE---------DMFCHEFHLVDLRVMDNCLKVTK------G 90 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~---------~~~~i~~~~~dl~~~~~~~~~~~------~ 90 (374)
..+|||||+|-||.++++.|+++|+ +|+++.|+....... ....+.++.+|++|.+.+..+++ +
T Consensus 10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~ 89 (259)
T d2fr1a1 10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP 89 (259)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccccc
Confidence 5899999999999999999999998 578888864321111 11257889999999998887764 4
Q ss_pred CCEEEEcccccCCcccccCC---cceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCCCcccccccCCCCCCCCCCC
Q 017290 91 VDHVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE 167 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~~~---~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~ 167 (374)
+|.|||+++........+.+ ....+..|+.+..++.+++...+..++|++||....-. ..
T Consensus 90 i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g-----------------~~ 152 (259)
T d2fr1a1 90 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFG-----------------AP 152 (259)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTC-----------------CT
T ss_pred ccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccC-----------------Cc
Confidence 78999999976543333322 33457889999999999888887779999999765421 22
Q ss_pred CCCchHHhHHHHHHHHHHHHhhhCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHH
Q 017290 168 PQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDE 247 (374)
Q Consensus 168 ~~~~y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 247 (374)
....|+.+|...+.+.+.+.. .|++++.+.||.+.+++- ....+...+. .. -...+..++
T Consensus 153 ~~~~YaAaka~l~~la~~~~~-~Gi~v~~I~pg~~~~~g~--------~~~~~~~~~~--------~~---G~~~~~~~~ 212 (259)
T d2fr1a1 153 GLGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGM--------AEGPVADRFR--------RH---GVIEMPPET 212 (259)
T ss_dssp TCTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC--------------------CT--------TT---TEECBCHHH
T ss_pred ccHHHHHHHHhHHHHHHHHHh-CCCCEEECCCCcccCCcc--------ccchHHHHHH--------hc---CCCCCCHHH
Confidence 346799999999999887765 489999999999876531 1111111111 01 123567899
Q ss_pred HHHHHHhhhccCCCCcE
Q 017290 248 CVEGVLRLTKSDFREPV 264 (374)
Q Consensus 248 va~~i~~~~~~~~~~~~ 264 (374)
+++++..++.++.....
T Consensus 213 ~~~~l~~~l~~~~~~~~ 229 (259)
T d2fr1a1 213 ACRALQNALDRAEVCPI 229 (259)
T ss_dssp HHHHHHHHHHTTCSSCE
T ss_pred HHHHHHHHHhCCCceEE
Confidence 99999999988754433
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.63 E-value=2.5e-15 Score=133.24 Aligned_cols=204 Identities=17% Similarity=0.092 Sum_probs=139.8
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc------------cccceeEEecccchhhHhhhcc-
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED------------MFCHEFHLVDLRVMDNCLKVTK- 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------~~~i~~~~~dl~~~~~~~~~~~- 89 (374)
..++|++|||||++-||+++++.|+++|++|++.+|+........ ........+|+.+.+.++++++
T Consensus 4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 83 (302)
T d1gz6a_ 4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT 83 (302)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHH
Confidence 346799999999999999999999999999999988754321110 0123456677777666555443
Q ss_pred ------CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCccccccc
Q 017290 90 ------GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNV 156 (374)
Q Consensus 90 ------~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~ 156 (374)
++|++||+||......+.+ .+.+..+++|+.++..+.+++ ++.+-.++|++||...+-
T Consensus 84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~--------- 154 (302)
T d1gz6a_ 84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY--------- 154 (302)
T ss_dssp HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH---------
T ss_pred HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcC---------
Confidence 7999999999865433333 334567889999988887765 344445999999976532
Q ss_pred CCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEee
Q 017290 157 SLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMW 233 (374)
Q Consensus 157 ~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (374)
+......|+.+|...+.+.+.++.+ +|+++..+.|+.+--... ....
T Consensus 155 --------~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~------~~~~---------------- 204 (302)
T d1gz6a_ 155 --------GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTE------TVMP---------------- 204 (302)
T ss_dssp --------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTG------GGSC----------------
T ss_pred --------CCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchh------hcCc----------------
Confidence 1123468999999999999998765 479999999987633211 1111
Q ss_pred CCCcccccceeHHHHHHHHHhhhccC---CCCcEEecC
Q 017290 234 GDGLQTRSFTFIDECVEGVLRLTKSD---FREPVNIGS 268 (374)
Q Consensus 234 ~~~~~~~~~i~~~Dva~~i~~~~~~~---~~~~~~i~~ 268 (374)
......+..+|+|.+++.++... .++++.+.+
T Consensus 205 ---~~~~~~~~PedvA~~v~fL~S~~a~itG~~i~vdG 239 (302)
T d1gz6a_ 205 ---EDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGA 239 (302)
T ss_dssp ---HHHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEET
T ss_pred ---HhhHhcCCHHHHHHHHHHHcCCCcCCCCcEEEeCC
Confidence 11223344689999998887532 255555544
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=4.2e-15 Score=130.96 Aligned_cols=220 Identities=16% Similarity=0.070 Sum_probs=143.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEE---eCCCCcccc---------cccccceeEEecccchhhHhhhcc-----
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIAS---DWKKNEHMT---------EDMFCHEFHLVDLRVMDNCLKVTK----- 89 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~---~r~~~~~~~---------~~~~~i~~~~~dl~~~~~~~~~~~----- 89 (374)
|.||||||++-||+++++.|++.|.+|+.+ .|+...... .....+..+.+|++|.+++..+++
T Consensus 3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g 82 (285)
T d1jtva_ 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG 82 (285)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence 567899999999999999999999875544 444322111 112356789999999998887764
Q ss_pred CCCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
.+|++|++++........+ .+.+..+++|+.++..+.+++ ++.+-.++|++||....-
T Consensus 83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~--------------- 147 (285)
T d1jtva_ 83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM--------------- 147 (285)
T ss_dssp CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS---------------
T ss_pred chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcC---------------
Confidence 6899999999765433322 334556889999888877765 445545999999976542
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHH--------HHHhccCCceE
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFC--------RKALTSTDKFE 231 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 231 (374)
+......|+.+|...+.+.+.++.+ .|+++.++.||.+--+.-.. ......... ....+ .+.
T Consensus 148 --~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~ 220 (285)
T d1jtva_ 148 --GLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEK--VLGSPEEVLDRTDIHTFHRFYQ---YLA 220 (285)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---------CCHHHHHHTSCHHHHHHHHH---HHH
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHH--hccCHHHHhhccchhHHHHHHH---HHH
Confidence 2223467999999999999988765 47999999999986442110 000000000 00000 000
Q ss_pred eeCCCcccccceeHHHHHHHHHhhhccCCCCcEEecCC
Q 017290 232 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSD 269 (374)
Q Consensus 232 ~~~~~~~~~~~i~~~Dva~~i~~~~~~~~~~~~~i~~~ 269 (374)
. ............+|+|++++.++..+....+++.+.
T Consensus 221 ~-~~~~~~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g~ 257 (285)
T d1jtva_ 221 H-SKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTE 257 (285)
T ss_dssp H-HHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESCS
T ss_pred H-HhhhhcccCCCHHHHHHHHHHHHhCCCCCeEEecHH
Confidence 0 000011235678999999999999887777666643
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.60 E-value=2.6e-15 Score=133.24 Aligned_cols=221 Identities=12% Similarity=-0.028 Sum_probs=144.1
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhcc------
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVTK------ 89 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~~------ 89 (374)
.-++|++|||||+|-||+++++.|++.|++|++++|+..+.... ....+..+.+|+++.+.+..+++
T Consensus 22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 101 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA 101 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhc
Confidence 34679999999999999999999999999999999987542211 12245788899999888776553
Q ss_pred -CCCEEEEcccccCCcccccC---CcceehhhhHHHHHHHHHHH----HhC-CCCeEEEeecccccCCCcccccccCCCC
Q 017290 90 -GVDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEAS----RIS-GVKRFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 -~~d~vi~~a~~~~~~~~~~~---~~~~~~~~n~~~~~~ll~a~----~~~-~~~~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+|+.......... +....+.+|......+...+ ... ....++.+||.....
T Consensus 102 g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~------------- 168 (294)
T d1w6ua_ 102 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET------------- 168 (294)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH-------------
T ss_pred cccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhh-------------
Confidence 79999999997643222222 23334556666655554432 222 233566666643321
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+......|+.+|...+.+.+.++.+ .|+++.++.||.+-.+...... ............ . .
T Consensus 169 ----~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~--~~~~~~~~~~~~-~---------~ 232 (294)
T d1w6ua_ 169 ----GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL--DPTGTFEKEMIG-R---------I 232 (294)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------C--CTTSHHHHHHHT-T---------C
T ss_pred ----cccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhcc--CCcHHHHHHHhh-c---------C
Confidence 1122357999999999999988865 4799999999999765421110 001112222221 1 1
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
+...+...+|+|+++..++... .|.++.+.+|..+
T Consensus 233 pl~R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~~l 271 (294)
T d1w6ua_ 233 PCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEV 271 (294)
T ss_dssp TTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred CCCCCCCHHHHHHHHHHHhCchhcCCCCcEEEECCChhh
Confidence 2235678899999999988653 3778888877543
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.59 E-value=1.2e-14 Score=124.60 Aligned_cols=198 Identities=16% Similarity=0.142 Sum_probs=133.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHh-------hhcc--CCCEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL-------KVTK--GVDHVF 95 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~-------~~~~--~~d~vi 95 (374)
++|+||||||+|-||+++++.|+++|++|.++++......... .....+..+.+... +.+. ++|++|
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lI 76 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASAS----VIVKMTDSFTEQADQVTAEVGKLLGDQKVDAIL 76 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEE----EECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccc----ceeecccCcHHHHHHHHHHHHHHhCCCCceEEE
Confidence 4689999999999999999999999999999998765433211 22333333333222 2222 589999
Q ss_pred EcccccCCcc-cc---cCCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCCCCCCCCCCC
Q 017290 96 NLAADMGGMG-FI---QSNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ 169 (374)
Q Consensus 96 ~~a~~~~~~~-~~---~~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~ 169 (374)
|+||...... .. ..+.+..+++|+.+...+..++...- -.++|++||...+.. ....
T Consensus 77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~-----------------~~~~ 139 (236)
T d1dhra_ 77 CVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG-----------------TPGM 139 (236)
T ss_dssp ECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------------CTTB
T ss_pred ECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCC-----------------ccCC
Confidence 9998533211 11 12344568899998888887765421 138999999765421 1223
Q ss_pred CchHHhHHHHHHHHHHHHhh-----hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccccccee
Q 017290 170 DAYGLEKLASEELCKHYTKD-----FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244 (374)
Q Consensus 170 ~~y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (374)
..|+.+|...+.+.+.++.+ .++++..+.||.+.-+ +...... ....-.++.
T Consensus 140 ~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~-------------~~~~~~~----------~~~~~~~~~ 196 (236)
T d1dhra_ 140 IGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP-------------MNRKSMP----------EADFSSWTP 196 (236)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH-------------HHHHHST----------TSCGGGSEE
T ss_pred cccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCC-------------cchhhCc----------cchhhcCCC
Confidence 58999999999999999865 3699999999988743 2222211 111235788
Q ss_pred HHHHHHHHHhhhccC----CCCcEEe
Q 017290 245 IDECVEGVLRLTKSD----FREPVNI 266 (374)
Q Consensus 245 ~~Dva~~i~~~~~~~----~~~~~~i 266 (374)
.+|+|+.+..++... .++.+.+
T Consensus 197 pe~va~~~~~l~s~~~~~i~G~~i~v 222 (236)
T d1dhra_ 197 LEFLVETFHDWITGNKRPNSGSLIQV 222 (236)
T ss_dssp HHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred HHHHHHHHHHHhCCCccCCCCCeEEE
Confidence 999999999988654 2455544
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.57 E-value=2.6e-14 Score=122.33 Aligned_cols=189 Identities=17% Similarity=0.134 Sum_probs=126.4
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhH-------hhhc--cCCCEEEE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNC-------LKVT--KGVDHVFN 96 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~-------~~~~--~~~d~vi~ 96 (374)
..|||||||+|-||+++++.|+++|++|++++|++...... .....+|..+.+.. ...+ .++|++||
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~lin 77 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADS----NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC 77 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSE----EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcccc----cceeccccCchhHHHHHHHHHHHHhcCCCeeEEEE
Confidence 46899999999999999999999999999999987643322 12333444433322 2222 26899999
Q ss_pred cccccCCcc-ccc---CCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCCCCCCCCCCCCC
Q 017290 97 LAADMGGMG-FIQ---SNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170 (374)
Q Consensus 97 ~a~~~~~~~-~~~---~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~ 170 (374)
+||...... ... ...+..+++|+.++..+.+++...- -.++|++||...+. +.....
T Consensus 78 nAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~-----------------~~~~~~ 140 (235)
T d1ooea_ 78 VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG-----------------PTPSMI 140 (235)
T ss_dssp CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------------CCTTBH
T ss_pred CCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcC-----------------Cccccc
Confidence 999643211 111 1234457888888888877765421 13899999976543 222346
Q ss_pred chHHhHHHHHHHHHHHHhhh-----CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeH
Q 017290 171 AYGLEKLASEELCKHYTKDF-----GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI 245 (374)
Q Consensus 171 ~y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 245 (374)
.|+.+|...+.+.+.++.+. ++++..+.|+.+--+ +....+. ....-.++..
T Consensus 141 ~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~-------------~~~~~~~----------~~~~~~~~~~ 197 (235)
T d1ooea_ 141 GYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP-------------MNRKWMP----------NADHSSWTPL 197 (235)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH-------------HHHHHST----------TCCGGGCBCH
T ss_pred chHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc-------------chhhhCc----------CCccccCCCH
Confidence 89999999999999997653 567888899887532 2232221 1123357789
Q ss_pred HHHHHHHHhhhcc
Q 017290 246 DECVEGVLRLTKS 258 (374)
Q Consensus 246 ~Dva~~i~~~~~~ 258 (374)
+|+++.++.++..
T Consensus 198 ~~va~~~~~~l~~ 210 (235)
T d1ooea_ 198 SFISEHLLKWTTE 210 (235)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC
Confidence 9999998765543
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.55 E-value=4.7e-15 Score=129.01 Aligned_cols=209 Identities=13% Similarity=0.051 Sum_probs=139.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHh---CCCEEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhcc---
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKS---EGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTK--- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~--- 89 (374)
..+|.++||||++-||++++++|.+ +|++|++++|+....... ...++..+.+|+++.+++.++++
T Consensus 4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~ 83 (259)
T d1oaaa_ 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR 83 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 3568899999999999999999975 699999999987543221 12246788999999888776652
Q ss_pred --------CCCEEEEcccccCCcc---ccc---CCcceehhhhHHHHHHHHHHHHhC----C--CCeEEEeecccccCCC
Q 017290 90 --------GVDHVFNLAADMGGMG---FIQ---SNHSVIMYNNTMISFNMLEASRIS----G--VKRFFYASSACIYPEF 149 (374)
Q Consensus 90 --------~~d~vi~~a~~~~~~~---~~~---~~~~~~~~~n~~~~~~ll~a~~~~----~--~~~~i~~Ss~~vy~~~ 149 (374)
..|++|++|+...... ..+ .+.+..+++|+.++..+.+++... + ..++|++||...+.
T Consensus 84 ~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~-- 161 (259)
T d1oaaa_ 84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ-- 161 (259)
T ss_dssp HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS--
T ss_pred HhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC--
Confidence 4579999998643211 122 224456889999999999887542 2 23899999976542
Q ss_pred cccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh-hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCC
Q 017290 150 KQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD-FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTD 228 (374)
Q Consensus 150 ~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~ 228 (374)
+......|+.+|...+.+.+.++.+ .++++..+.||.+-.+....................
T Consensus 162 ---------------~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~--- 223 (259)
T d1oaaa_ 162 ---------------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQK--- 223 (259)
T ss_dssp ---------------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHH---
T ss_pred ---------------CCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHh---
Confidence 2223468999999999999999765 468999999998875410000000000001111000
Q ss_pred ceEeeCCCcccccceeHHHHHHHHHhhhccC
Q 017290 229 KFEMWGDGLQTRSFTFIDECVEGVLRLTKSD 259 (374)
Q Consensus 229 ~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~ 259 (374)
. ...-.+...+|+|++++.++...
T Consensus 224 ---~----~~~~r~~~p~evA~~i~~ll~~~ 247 (259)
T d1oaaa_ 224 ---L----KSDGALVDCGTSAQKLLGLLQKD 247 (259)
T ss_dssp ---H----HHTTCSBCHHHHHHHHHHHHHHC
T ss_pred ---c----CCCCCCCCHHHHHHHHHHHhhhc
Confidence 0 01123578899999999888654
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=8.2e-14 Score=120.26 Aligned_cols=205 Identities=16% Similarity=0.089 Sum_probs=136.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc---cccceeEEecccchhhHhhhc-------cCCCE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED---MFCHEFHLVDLRVMDNCLKVT-------KGVDH 93 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~i~~~~~dl~~~~~~~~~~-------~~~d~ 93 (374)
.++|.+|||||++-||.+++++|+++|++|++++|+.+...... .........|+.+.+.+.+.. ...|.
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV 82 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccccc
Confidence 46899999999999999999999999999999999876533221 123456677777766554433 26788
Q ss_pred EEEcccccCCccc---------ccCCcceehhhhHHHHHHHHHHHHhC----------CCCeEEEeecccccCCCccccc
Q 017290 94 VFNLAADMGGMGF---------IQSNHSVIMYNNTMISFNMLEASRIS----------GVKRFFYASSACIYPEFKQLET 154 (374)
Q Consensus 94 vi~~a~~~~~~~~---------~~~~~~~~~~~n~~~~~~ll~a~~~~----------~~~~~i~~Ss~~vy~~~~~~~~ 154 (374)
++++++....... ..+..+..+++|+.++..+.+++... +..++|++||...+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~------- 155 (248)
T d2o23a1 83 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE------- 155 (248)
T ss_dssp EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-------
T ss_pred cccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc-------
Confidence 8888765432111 11233456788999998888877431 122799999986642
Q ss_pred ccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceE
Q 017290 155 NVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFE 231 (374)
Q Consensus 155 ~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (374)
+......|+.+|...+.+.+.++.+ .++++..+.||.+..+... ............ . ++
T Consensus 156 ----------~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~-----~~~~~~~~~~~~-~--~p 217 (248)
T d2o23a1 156 ----------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT-----SLPEKVCNFLAS-Q--VP 217 (248)
T ss_dssp ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------CHHHH-T--CS
T ss_pred ----------CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhh-----cCCHHHHHHHHh-c--CC
Confidence 2223468999999999999999866 4699999999998755321 111111111111 0 11
Q ss_pred eeCCCcccccceeHHHHHHHHHhhhccC
Q 017290 232 MWGDGLQTRSFTFIDECVEGVLRLTKSD 259 (374)
Q Consensus 232 ~~~~~~~~~~~i~~~Dva~~i~~~~~~~ 259 (374)
+ .-++...+|+|++++.+++.+
T Consensus 218 l------~~R~g~peevA~~v~fL~s~~ 239 (248)
T d2o23a1 218 F------PSRLGDPAEYAHLVQAIIENP 239 (248)
T ss_dssp S------SCSCBCHHHHHHHHHHHHHCT
T ss_pred C------CCCCcCHHHHHHHHHHHHhCC
Confidence 1 124678899999999888754
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.53 E-value=4.9e-14 Score=121.81 Aligned_cols=170 Identities=14% Similarity=-0.030 Sum_probs=119.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCccccc---ccccceeEEecccchhhHhhhcc---------
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTE---DMFCHEFHLVDLRVMDNCLKVTK--------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~---~~~~i~~~~~dl~~~~~~~~~~~--------- 89 (374)
|++|+||||||++-||.+++++|+++|+ .|++..|+..+..+. ...++.++.+|+++.+.+..+++
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~ 80 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence 3568999999999999999999999985 688888887654322 22357889999999887766543
Q ss_pred CCCEEEEcccccCCcc-ccc---CCcceehhhhHHHHHHHHHHHH----hC-----------CCCeEEEeecccccCCCc
Q 017290 90 GVDHVFNLAADMGGMG-FIQ---SNHSVIMYNNTMISFNMLEASR----IS-----------GVKRFFYASSACIYPEFK 150 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~-~~~---~~~~~~~~~n~~~~~~ll~a~~----~~-----------~~~~~i~~Ss~~vy~~~~ 150 (374)
++|++||+||...... ..+ .+.+..+++|+.++..+.+++. +. ...+++.+|+...+....
T Consensus 81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 160 (250)
T d1yo6a1 81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN 160 (250)
T ss_dssp CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence 3899999999754221 112 2245578899999888877653 11 113677777754432211
Q ss_pred ccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCccc
Q 017290 151 QLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIY 203 (374)
Q Consensus 151 ~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~ 203 (374)
... .+..+...|+.||.....+.+.++.+ .++.+..+.||.|-
T Consensus 161 -------~~~---~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~ 206 (250)
T d1yo6a1 161 -------TSG---SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQ 206 (250)
T ss_dssp -------CST---TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-
T ss_pred -------ccc---ccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCC
Confidence 000 02234456999999999999888765 47999999999875
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=2.3e-13 Score=118.77 Aligned_cols=201 Identities=15% Similarity=0.094 Sum_probs=138.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-------ccccceeEEecccchhhHhhhc-------c
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-------DMFCHEFHLVDLRVMDNCLKVT-------K 89 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~i~~~~~dl~~~~~~~~~~-------~ 89 (374)
.++|++|||||++-||+++++.|+++|++|++++|+.+..... .......+.+|+.+.+...... .
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 91 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 91 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence 4679999999999999999999999999999999987543221 1124566778888766655443 3
Q ss_pred CCCEEEEcccccCCcccccCC---cceehhhhHHHHHHHHHHHH----hCCCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNMLEASR----ISGVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~~~---~~~~~~~n~~~~~~ll~a~~----~~~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
..|+++++|+........+.+ ....+++|+.++..+.+++. +.+ .++|++||...+-
T Consensus 92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~-G~ii~isS~~~~~--------------- 155 (269)
T d1xu9a_ 92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKV--------------- 155 (269)
T ss_dssp SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGTS---------------
T ss_pred CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC-CcceEeccchhcC---------------
Confidence 789999999876433333323 34467889888777766553 323 3899999976532
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh-----hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD-----FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+......|+.+|...+.+.+.++.+ .++.+..+.||.+--+ +...... +.
T Consensus 156 --~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~-------------~~~~~~~----------~~ 210 (269)
T d1xu9a_ 156 --AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE-------------TAMKAVS----------GI 210 (269)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH-------------HHHHHSC----------GG
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc-------------HHHHhcc----------CC
Confidence 2223468999999999999988765 2588888999988532 2222211 11
Q ss_pred ccccceeHHHHHHHHHhhhccCCCCcEE
Q 017290 238 QTRSFTFIDECVEGVLRLTKSDFREPVN 265 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~~~~~~~ 265 (374)
........+++|+.++..+......+|.
T Consensus 211 ~~~~~~~~e~~a~~i~~~~~~~~~~i~~ 238 (269)
T d1xu9a_ 211 VHMQAAPKEECALEIIKGGALRQEEVYY 238 (269)
T ss_dssp GGGGCBCHHHHHHHHHHHHHTTCSEEEE
T ss_pred ccccCCCHHHHHHHHHHHhhcCCCEEEc
Confidence 2233456789999988877665554443
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.50 E-value=2.3e-13 Score=118.08 Aligned_cols=218 Identities=14% Similarity=-0.003 Sum_probs=140.5
Q ss_pred CCCCeEEEEcCcc--hhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGG--FIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
..+|++|||||+| -||+++++.|+++|++|++.+|+++..... ..........|+.+.......++
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 82 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence 3679999999998 799999999999999999999986532211 11234667778877665555442
Q ss_pred CCCEEEEcccccCCcccccCCc--------ceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccccCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQSNH--------SVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETNVSLK 159 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~~~~--------~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~~~~~ 159 (374)
..|++||+++............ ......|+.+...+..++...- -+.+|++||.....
T Consensus 83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~------------ 150 (258)
T d1qsga_ 83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER------------ 150 (258)
T ss_dssp SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS------------
T ss_pred ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhcc------------
Confidence 6799999998754322111111 1123445555555555554321 23688888865421
Q ss_pred CCCCCCCCCCCchHHhHHHHHHHHHHHHhhh---CCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCC
Q 017290 160 ESDAWPAEPQDAYGLEKLASEELCKHYTKDF---GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDG 236 (374)
Q Consensus 160 e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
+......|..+|...+.+++.++.+. ++++..++||.+..+..... ............ ..
T Consensus 151 -----~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~---~~~~~~~~~~~~-~~-------- 213 (258)
T d1qsga_ 151 -----AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI---KDFRKMLAHCEA-VT-------- 213 (258)
T ss_dssp -----BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS---TTHHHHHHHHHH-HS--------
T ss_pred -----CCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccccccc---chhhhHHHHHHh-CC--------
Confidence 11234679999999999999988764 59999999999986643211 111222222221 11
Q ss_pred cccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 237 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 237 ~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+...+...+|+|.++..++... .+.++.+.+|..
T Consensus 214 -pl~R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~ 251 (258)
T d1qsga_ 214 -PIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 251 (258)
T ss_dssp -TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred -CCCCCcCHHHHHHHHHHHhCchhcCccCceEEECcCHH
Confidence 1224678999999999988653 367788877754
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=7.4e-14 Score=122.41 Aligned_cols=180 Identities=16% Similarity=0.090 Sum_probs=121.0
Q ss_pred CCeE-EEEcCcchhHHHHHHHHHhC-CCEEEEEeCCCCccccc------ccccceeEEecccchhhHhhhcc-------C
Q 017290 26 KLRI-SVTGAGGFIASHIARRLKSE-GHYIIASDWKKNEHMTE------DMFCHEFHLVDLRVMDNCLKVTK-------G 90 (374)
Q Consensus 26 ~~~i-lItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~------~~~~i~~~~~dl~~~~~~~~~~~-------~ 90 (374)
+|+| |||||++-||.++++.|++. |+.|++.+|+.++.... ....+.++.+|+++.+.++++++ +
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~ 81 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 81 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 4555 89999999999999999986 89999999987643211 12356889999999888776653 7
Q ss_pred CCEEEEcccccCCccccc---CCcceehhhhHHHHHHHHHHHHhCC--CCeEEEeecccccCCCcccccc-------cCC
Q 017290 91 VDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEASRISG--VKRFFYASSACIYPEFKQLETN-------VSL 158 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~i~~Ss~~vy~~~~~~~~~-------~~~ 158 (374)
+|++||+||........+ .+.+..+++|+.++..+.+++...= -.++|++||...........+. ...
T Consensus 82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~ 161 (275)
T d1wmaa1 82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI 161 (275)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhccccc
Confidence 899999999764322211 2234568899999999988875421 1289999996543111000000 000
Q ss_pred -----------------CCCCCCCCCCCCchHHhHHHHHHHHHHHHhh-------hCCcEEEEeeCcccCC
Q 017290 159 -----------------KESDAWPAEPQDAYGLEKLASEELCKHYTKD-------FGIECRVGRFHNIYGP 205 (374)
Q Consensus 159 -----------------~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~-------~~~~~~ilR~~~v~g~ 205 (374)
.-....+..+...|+.+|.....+.+.++.+ .++.+..+.||.|--+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~ 232 (275)
T d1wmaa1 162 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD 232 (275)
T ss_dssp CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCST
T ss_pred chhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCC
Confidence 0000012345678999999988877665543 3799999999988643
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.46 E-value=3e-12 Score=112.52 Aligned_cols=215 Identities=14% Similarity=0.102 Sum_probs=137.0
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------c-----------------cccceeEEecccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------D-----------------MFCHEFHLVDLRV 80 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~-----------------~~~i~~~~~dl~~ 80 (374)
++.++||||++-||+++++.|+++|++|++.+++....... . ........+|+++
T Consensus 2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~ 81 (284)
T d1e7wa_ 2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL 81 (284)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence 46789999999999999999999999999988765321110 0 0012234567888
Q ss_pred hhhHhhhcc-------CCCEEEEcccccCCcccccCCc---c--------------eehhhhHHHHHHHHHHHHh-----
Q 017290 81 MDNCLKVTK-------GVDHVFNLAADMGGMGFIQSNH---S--------------VIMYNNTMISFNMLEASRI----- 131 (374)
Q Consensus 81 ~~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~---~--------------~~~~~n~~~~~~ll~a~~~----- 131 (374)
.+++.++++ ++|++||+||........+.+. + ..+.+|+.+...+.+++.+
T Consensus 82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 161 (284)
T d1e7wa_ 82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 161 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence 777776653 7999999999764322211111 1 1356677777777766432
Q ss_pred ----CC-CCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCccc
Q 017290 132 ----SG-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIY 203 (374)
Q Consensus 132 ----~~-~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~ 203 (374)
.+ ..++|+++|..... +......|+.+|...+.+.+.++.+ .|+++..+.||..-
T Consensus 162 ~~~~~~~~~~ii~~~s~~~~~-----------------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~ 224 (284)
T d1e7wa_ 162 PAKHRGTNYSIINMVDAMTNQ-----------------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSV 224 (284)
T ss_dssp CGGGSCSCEEEEEECCTTTTS-----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred HHHhcCCCCcccccccccccC-----------------CccceeeeccccccchhhhHHHHHHhCCcccccccccccccc
Confidence 11 22577676654321 2233468999999999999998765 47999999999642
Q ss_pred CCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCccC
Q 017290 204 GPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 273 (374)
Q Consensus 204 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~s 273 (374)
-. ............. . +++ ...+...+|+|.+++.++... .+..+.+.+|..++
T Consensus 225 ~~-------~~~~~~~~~~~~~-~--~pl------~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~ 282 (284)
T d1e7wa_ 225 LV-------DDMPPAVWEGHRS-K--VPL------YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 282 (284)
T ss_dssp CG-------GGSCHHHHHHHHT-T--CTT------TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred cc-------ccCCHHHHHHHHh-c--CCC------CCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence 21 1223334443332 1 111 124678999999999988653 36778888876654
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.45 E-value=1.2e-12 Score=112.22 Aligned_cols=210 Identities=14% Similarity=0.076 Sum_probs=138.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc------CCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK------GVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~------~~d~vi~~a~ 99 (374)
.|++|||||++-||+++++.|+++|++|++++|+.+.. ......+|+.+......+.. ..+.+++.++
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE------DLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG 74 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS------SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc------cceEeeccccchhhhHHHHHhhhccccccchhhhhh
Confidence 37899999999999999999999999999999986532 23566788877655544432 4455555555
Q ss_pred ccCCcc-------cccCCcceehhhhHHHHHHHHHHHHhC----------CCCeEEEeecccccCCCcccccccCCCCCC
Q 017290 100 DMGGMG-------FIQSNHSVIMYNNTMISFNMLEASRIS----------GVKRFFYASSACIYPEFKQLETNVSLKESD 162 (374)
Q Consensus 100 ~~~~~~-------~~~~~~~~~~~~n~~~~~~ll~a~~~~----------~~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~ 162 (374)
...... ......+..++.|+.+...+...+... +..++|++||...+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~--------------- 139 (241)
T d1uaya_ 75 VGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE--------------- 139 (241)
T ss_dssp CCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH---------------
T ss_pred ccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc---------------
Confidence 332111 111123345778888777776655321 123899999976542
Q ss_pred CCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCccc
Q 017290 163 AWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239 (374)
Q Consensus 163 ~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (374)
+......|+.+|...+.+.+.++.+ +|+++..+.||.+..+.. ............. . .++ .
T Consensus 140 --~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~-----~~~~~~~~~~~~~-~--~~~------~ 203 (241)
T d1uaya_ 140 --GQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLL-----QGLPEKAKASLAA-Q--VPF------P 203 (241)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHH-----HTSCHHHHHHHHT-T--CCS------S
T ss_pred --CCCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCccccccc-----chhhhhHHHHHHh-c--CCC------C
Confidence 2223468999999999999999865 479999999999865421 1111222222221 1 111 1
Q ss_pred ccceeHHHHHHHHHhhhccC--CCCcEEecCCCcc
Q 017290 240 RSFTFIDECVEGVLRLTKSD--FREPVNIGSDEMV 272 (374)
Q Consensus 240 ~~~i~~~Dva~~i~~~~~~~--~~~~~~i~~~~~~ 272 (374)
..+...+|+|.+++.++... .+.++.+.+|-.+
T Consensus 204 ~R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG~~m 238 (241)
T d1uaya_ 204 PRLGRPEEYAALVLHILENPMLNGEVVRLDGALRM 238 (241)
T ss_dssp CSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred CCCcCHHHHHHHHHHHHhCCCCCCCEEEECCcccC
Confidence 24667899999999988765 3677888776543
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.44 E-value=2.6e-12 Score=112.29 Aligned_cols=218 Identities=12% Similarity=-0.033 Sum_probs=134.8
Q ss_pred CCCCeEEEEcCcc--hhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhcc-------
Q 017290 24 SEKLRISVTGAGG--FIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTK------- 89 (374)
Q Consensus 24 ~~~~~ilItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~------- 89 (374)
.++|++|||||+| -||.++++.|+++|++|++++|+++..... ......+...|+++.+.+.++++
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 82 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 82 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence 3679999999987 699999999999999999999986421111 12245677889998777666653
Q ss_pred CCCEEEEcccccCCcccccCCcce---ehhhhHH----HHHHHHHHHHhC-CCC-eEEEeecccccCCCcccccccCCCC
Q 017290 90 GVDHVFNLAADMGGMGFIQSNHSV---IMYNNTM----ISFNMLEASRIS-GVK-RFFYASSACIYPEFKQLETNVSLKE 160 (374)
Q Consensus 90 ~~d~vi~~a~~~~~~~~~~~~~~~---~~~~n~~----~~~~ll~a~~~~-~~~-~~i~~Ss~~vy~~~~~~~~~~~~~e 160 (374)
++|++||+++.............. .+..+.. ....+.....+. +.. .++++|+.....
T Consensus 83 ~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~------------- 149 (274)
T d2pd4a1 83 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK------------- 149 (274)
T ss_dssp CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-------------
T ss_pred CCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccc-------------
Confidence 789999999976432211111111 1111111 122222222222 112 455555544332
Q ss_pred CCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCc
Q 017290 161 SDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGL 237 (374)
Q Consensus 161 ~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (374)
+......|+.+|...+.+++..+.+ .|+++.++.||.+.-+..... .-........... .
T Consensus 150 ----~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~----~~~~~~~~~~~~~---------~ 212 (274)
T d2pd4a1 150 ----YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI----ADFRMILKWNEIN---------A 212 (274)
T ss_dssp ----BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS----TTHHHHHHHHHHH---------S
T ss_pred ----ccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCcccccc----CchHHHHHHHhhh---------h
Confidence 2223457999999999998887765 469999999999876543211 1111111111111 1
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCCCc
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM 271 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~ 271 (374)
+...+...+|+|.++..++... .+.++.+.+|..
T Consensus 213 p~~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~~ 250 (274)
T d2pd4a1 213 PLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYH 250 (274)
T ss_dssp TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred hccCCcCHHHHHHHHHHHhChhhCCCcCceEEECCChh
Confidence 1235678999999999988754 367788887653
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.33 E-value=4.4e-11 Score=105.56 Aligned_cols=220 Identities=8% Similarity=-0.063 Sum_probs=133.9
Q ss_pred CCCCCCeEEEEcCcc--hhHHHHHHHHHhCCCEEEEEeCCCCc-------------cccc----ccccc-eeEEec----
Q 017290 22 WPSEKLRISVTGAGG--FIASHIARRLKSEGHYIIASDWKKNE-------------HMTE----DMFCH-EFHLVD---- 77 (374)
Q Consensus 22 ~~~~~~~ilItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~-------------~~~~----~~~~i-~~~~~d---- 77 (374)
++.++|++|||||+| -||+++++.|+++|.+|++..|++.. .... ....+ .....|
T Consensus 4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (297)
T d1d7oa_ 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD 83 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence 345789999999987 79999999999999999998875310 0000 00000 111111
Q ss_pred -------------------ccchhhH----hhhccCCCEEEEcccccCC--c---ccccCCcceehhhhHHHHHHHHHHH
Q 017290 78 -------------------LRVMDNC----LKVTKGVDHVFNLAADMGG--M---GFIQSNHSVIMYNNTMISFNMLEAS 129 (374)
Q Consensus 78 -------------------l~~~~~~----~~~~~~~d~vi~~a~~~~~--~---~~~~~~~~~~~~~n~~~~~~ll~a~ 129 (374)
..+.+.+ .+.+.++|++||+|+.... . +....+....+++|+.+...+..++
T Consensus 84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~ 163 (297)
T d1d7oa_ 84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF 163 (297)
T ss_dssp SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence 1111212 2223489999999986431 1 1222234556788999988888877
Q ss_pred HhCCCC--eEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHh----hhCCcEEEEeeCccc
Q 017290 130 RISGVK--RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTK----DFGIECRVGRFHNIY 203 (374)
Q Consensus 130 ~~~~~~--~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~----~~~~~~~ilR~~~v~ 203 (374)
.....+ +.+.+++.+.... .......|..+|...+.+.+.++. ..++++..+.||.+.
T Consensus 164 ~~~~~~~g~~~~~~~~~~~~~----------------~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~ 227 (297)
T d1d7oa_ 164 LPIMNPGGASISLTYIASERI----------------IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLG 227 (297)
T ss_dssp GGGEEEEEEEEEEECGGGTSC----------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCB
T ss_pred HHHhhcCCcceeeeehhhccc----------------ccccccceecccccccccccccchhccccceEEeccccccccc
Confidence 654322 4555555433211 112345799999888887766543 357999999999998
Q ss_pred CCCCCCCCCCCcHHHHHHHHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCC
Q 017290 204 GPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDE 270 (374)
Q Consensus 204 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~ 270 (374)
.+.... ......+...... .. +..++...+|+|.+++.++... .+.++.+.+|.
T Consensus 228 T~~~~~---~~~~~~~~~~~~~-~~---------PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~ 285 (297)
T d1d7oa_ 228 SRAAKA---IGFIDTMIEYSYN-NA---------PIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp CCCSSC---CSHHHHHHHHHHH-HS---------SSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred chhhhh---ccCCHHHHHHHHh-CC---------CCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence 765321 1122233333222 11 1224678999999999998653 36777887664
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.31 E-value=1.3e-11 Score=107.31 Aligned_cols=224 Identities=12% Similarity=0.007 Sum_probs=131.5
Q ss_pred CCCCeEEEEcCcc--hhHHHHHHHHHhCCCEEEEEeCCCCccc----ccccccceeEEecccchhhHhhhc---------
Q 017290 24 SEKLRISVTGAGG--FIASHIARRLKSEGHYIIASDWKKNEHM----TEDMFCHEFHLVDLRVMDNCLKVT--------- 88 (374)
Q Consensus 24 ~~~~~ilItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~i~~~~~dl~~~~~~~~~~--------- 88 (374)
+.+|++|||||+| -||.++++.|+++|++|++..|+..+.. +........+.+|+.+.+.+..++
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~ 83 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA 83 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence 4679999999765 4999999999999999999998865421 112234677889999876554442
Q ss_pred -cCCCEEEEcccccCCcccccCC-----cce---ehhhhHHHHHHHHHHHHhCC-CCeEEEeecccccCCCcccccccCC
Q 017290 89 -KGVDHVFNLAADMGGMGFIQSN-----HSV---IMYNNTMISFNMLEASRISG-VKRFFYASSACIYPEFKQLETNVSL 158 (374)
Q Consensus 89 -~~~d~vi~~a~~~~~~~~~~~~-----~~~---~~~~n~~~~~~ll~a~~~~~-~~~~i~~Ss~~vy~~~~~~~~~~~~ 158 (374)
...|+++|+++..........+ ... .+..|+.........+.... ....++++|.....
T Consensus 84 ~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~----------- 152 (268)
T d2h7ma1 84 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR----------- 152 (268)
T ss_dssp TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS-----------
T ss_pred CCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccc-----------
Confidence 2579999999965321111111 111 12233333333333333322 12444444433221
Q ss_pred CCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCC-----CCCC-CCCcHHHHHHHHhccCCc
Q 017290 159 KESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFG-----TWKG-MEKAPAAFCRKALTSTDK 229 (374)
Q Consensus 159 ~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~-----~~~~-~~~~~~~~~~~~~~~~~~ 229 (374)
.......|+.+|...+.+++.++.+ .++++..+.||.+-.+.- .... ........+........
T Consensus 153 ------~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 225 (268)
T d2h7ma1 153 ------AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRA- 225 (268)
T ss_dssp ------CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHC-
T ss_pred ------cCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcC-
Confidence 1122357999999999999988765 469999999998864310 0000 00000011111111000
Q ss_pred eEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 230 FEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 230 ~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
+ ..+.+...+|+|+++..++... .+.++.+.+|...
T Consensus 226 -p------l~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~ 265 (268)
T d2h7ma1 226 -P------IGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 265 (268)
T ss_dssp -T------TCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred -C------CCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence 0 0133667899999999988653 3667888877544
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.28 E-value=1.1e-10 Score=100.68 Aligned_cols=215 Identities=14% Similarity=0.013 Sum_probs=121.2
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHh--------hhccCCCEEEEc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL--------KVTKGVDHVFNL 97 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~--------~~~~~~d~vi~~ 97 (374)
||.||||||++-||+++++.|++.|++|++++|+..+. ..|+.+.+... +....+|+++++
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~-----------~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~ 69 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------IADLSTAEGRKQAIADVLAKCSKGMDGLVLC 69 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE-----------ECCTTSHHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH-----------HHHhcCHHHHHHHHHHHHHHhCCCCcEEEEc
Confidence 68899999999999999999999999999999876432 22333332222 112368999999
Q ss_pred ccccCCcccccCCcceehhhhHHHHHHHHHHH----HhCCCCeEEEeecccccCCCc-cccc------ccC-----CCCC
Q 017290 98 AADMGGMGFIQSNHSVIMYNNTMISFNMLEAS----RISGVKRFFYASSACIYPEFK-QLET------NVS-----LKES 161 (374)
Q Consensus 98 a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~i~~Ss~~vy~~~~-~~~~------~~~-----~~e~ 161 (374)
|+... ..........+|..+...+.+.. .+........+++........ ..+. +.. +...
T Consensus 70 Ag~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~ 145 (257)
T d1fjha_ 70 AGLGP----QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEH 145 (257)
T ss_dssp CCCCT----TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHT
T ss_pred CCCCC----cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhc
Confidence 98543 12223344555666655555443 334444555555533221111 0000 000 0000
Q ss_pred CCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHHHHhccCCce-EeeCCCc
Q 017290 162 DAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKF-EMWGDGL 237 (374)
Q Consensus 162 ~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 237 (374)
. ........|+.+|...+.+.+.++.+ .|+++..+.||.+-.+.-. ..+.. .... .+.....
T Consensus 146 ~-~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~---------~~~~~----~~~~~~~~~~~~ 211 (257)
T d1fjha_ 146 A-GEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQ---------AGLQD----PRYGESIAKFVP 211 (257)
T ss_dssp C-CTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------------------CCC
T ss_pred c-CCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHH---------hhcCC----HHHHHHHHhcCC
Confidence 0 00011235999999999999888754 4799999999998654311 00000 0000 0001111
Q ss_pred ccccceeHHHHHHHHHhhhccC----CCCcEEecCC
Q 017290 238 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSD 269 (374)
Q Consensus 238 ~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~ 269 (374)
+.-.+...+|+|.++..++... .+..+.+.+|
T Consensus 212 PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG 247 (257)
T d1fjha_ 212 PMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp STTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence 2335778899999999998653 3667777765
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.27 E-value=1e-10 Score=101.45 Aligned_cols=213 Identities=15% Similarity=0.093 Sum_probs=126.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--------ccccceeEEecccc----hhhHhh-------h
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--------DMFCHEFHLVDLRV----MDNCLK-------V 87 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~----~~~~~~-------~ 87 (374)
+..|||||++-||+++++.|+++|++|++++|+..+..+. ..........|..+ .+.+.+ .
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 4679999999999999999999999999999986542211 11123334444433 222322 2
Q ss_pred ccCCCEEEEcccccCCcccccC---Ccc-----------eehhhhHHHHHHHHHHHHhC---------CCCeEEEeeccc
Q 017290 88 TKGVDHVFNLAADMGGMGFIQS---NHS-----------VIMYNNTMISFNMLEASRIS---------GVKRFFYASSAC 144 (374)
Q Consensus 88 ~~~~d~vi~~a~~~~~~~~~~~---~~~-----------~~~~~n~~~~~~ll~a~~~~---------~~~~~i~~Ss~~ 144 (374)
+.++|++||+|+.......... ... ..+..|.............. ....++.+|+..
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (266)
T d1mxha_ 82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM 161 (266)
T ss_dssp HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence 3379999999997542211110 111 11222333333333222221 112455555544
Q ss_pred ccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh---hCCcEEEEeeCcccCCCCCCCCCCCcHHHHHH
Q 017290 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD---FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCR 221 (374)
Q Consensus 145 vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~ 221 (374)
... +......|+.+|...+.+.+.++.+ .|+++..+.||.+.-+.. .......
T Consensus 162 ~~~-----------------~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~-------~~~~~~~ 217 (266)
T d1mxha_ 162 TDL-----------------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPA-------MPQETQE 217 (266)
T ss_dssp GGS-----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSS-------SCHHHHH
T ss_pred ccc-----------------cCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEecccc-------CCHHHHH
Confidence 321 2223468999999999999888765 479999999999875432 1222333
Q ss_pred HHhccCCceEeeCCCcccccceeHHHHHHHHHhhhccC----CCCcEEecCCCcc
Q 017290 222 KALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV 272 (374)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~i~~~~~~~----~~~~~~i~~~~~~ 272 (374)
.... .. ++ + +.+...+|+|.+++.++... .+.++.+.+|-.+
T Consensus 218 ~~~~-~~--pl-~-----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l 263 (266)
T d1mxha_ 218 EYRR-KV--PL-G-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL 263 (266)
T ss_dssp HHHT-TC--TT-T-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHh-cC--CC-C-----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence 3222 11 11 1 23467899999999998654 3677888877554
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.20 E-value=2.2e-10 Score=102.45 Aligned_cols=162 Identities=8% Similarity=-0.056 Sum_probs=104.9
Q ss_pred CCeEEEEc--CcchhHHHHHHHHHhCCCEEEEEeCCCCccc---------------cccc---ccceeE-----------
Q 017290 26 KLRISVTG--AGGFIASHIARRLKSEGHYIIASDWKKNEHM---------------TEDM---FCHEFH----------- 74 (374)
Q Consensus 26 ~~~ilItG--atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------~~~~---~~i~~~----------- 74 (374)
.|.+|||| ++.-||+.+++.|.++|.+|++..+...... .... ......
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence 57899999 5568999999999999999999876542100 0000 000111
Q ss_pred ---------EecccchhhHhhh-------ccCCCEEEEcccccCCc-----ccccCCcceehhhhHHHHHHHHHHHHhCC
Q 017290 75 ---------LVDLRVMDNCLKV-------TKGVDHVFNLAADMGGM-----GFIQSNHSVIMYNNTMISFNMLEASRISG 133 (374)
Q Consensus 75 ---------~~dl~~~~~~~~~-------~~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~a~~~~~ 133 (374)
..|+.+.+.+..+ +.++|++||+++..... +....+....+++|+.+...+.+++...=
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m 161 (329)
T d1uh5a_ 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence 1234443333333 34899999999865321 12223345567788888887877765531
Q ss_pred --CCeEEEeecccccCCCcccccccCCCCCCCCCCCCCCchHHhHHHHHHHHHHHHhh----hCCcEEEEeeCccc
Q 017290 134 --VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD----FGIECRVGRFHNIY 203 (374)
Q Consensus 134 --~~~~i~~Ss~~vy~~~~~~~~~~~~~e~~~~~~~~~~~y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~ 203 (374)
-.++|.+||...... -+.....|+.+|...+.+++.++.+ +|+++..+.||.+-
T Consensus 162 ~~~GsIv~iss~~~~~~----------------~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~ 221 (329)
T d1uh5a_ 162 KPQSSIISLTYHASQKV----------------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK 221 (329)
T ss_dssp EEEEEEEEEECGGGTSC----------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred ccccccccceeehhccc----------------ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence 127899988655321 1122457999999999998888743 58999999999874
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.99 E-value=1.8e-10 Score=94.65 Aligned_cols=84 Identities=15% Similarity=0.111 Sum_probs=70.1
Q ss_pred ccCCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc-----ccccceeEEecccchhhHhhhccCC
Q 017290 17 EREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE-----DMFCHEFHLVDLRVMDNCLKVTKGV 91 (374)
Q Consensus 17 ~~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~i~~~~~dl~~~~~~~~~~~~~ 91 (374)
++.......+|+|+||||+|.||+.+++.|++.|.+|++++|+..+.... ....+.+..+|+.+.+.+.+.+.++
T Consensus 14 ~~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i 93 (191)
T d1luaa1 14 VKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGA 93 (191)
T ss_dssp HHHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTC
T ss_pred HHHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCc
Confidence 34444566889999999999999999999999999999999997653222 1224567889999999999999999
Q ss_pred CEEEEcccc
Q 017290 92 DHVFNLAAD 100 (374)
Q Consensus 92 d~vi~~a~~ 100 (374)
|+|||+|+.
T Consensus 94 Dilin~Ag~ 102 (191)
T d1luaa1 94 HFVFTAGAI 102 (191)
T ss_dssp SEEEECCCT
T ss_pred CeeeecCcc
Confidence 999999985
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.73 E-value=2e-08 Score=76.81 Aligned_cols=93 Identities=15% Similarity=0.145 Sum_probs=71.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc-ccceeEEecccchhhHhhh-ccCCCEEEEcccccCCc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM-FCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAADMGGM 104 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~~~~~~ 104 (374)
|+|+|+|+ |.+|+.+++.|.+.|++|++++.++........ .+..++.+|.++.+.+.++ +++++.++-+....
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d--- 76 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE--- 76 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH---
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcH---
Confidence 89999996 999999999999999999999998765443322 3678999999999999887 47899888876410
Q ss_pred ccccCCcceehhhhHHHHHHHHHHHHhCCCCeEE
Q 017290 105 GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138 (374)
Q Consensus 105 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i 138 (374)
..|+ .+...+++.+.+++|
T Consensus 77 -----------~~N~----~~~~~~k~~~~~~iI 95 (132)
T d1lssa_ 77 -----------EVNL----MSSLLAKSYGINKTI 95 (132)
T ss_dssp -----------HHHH----HHHHHHHHTTCCCEE
T ss_pred -----------HHHH----HHHHHHHHcCCceEE
Confidence 1233 233456778877766
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.42 E-value=1.3e-06 Score=67.24 Aligned_cols=97 Identities=13% Similarity=0.096 Sum_probs=59.0
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCC----CEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEG----HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
|+||.|+||||++|+.+++.|+++. .+++.+.++.+.........-.....++.+.+ .++++|++|.+++.
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~----~~~~~DivF~a~~~- 75 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLE----ALKALDIIVTCQGG- 75 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHH----HHHTCSEEEECSCH-
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchh----hhhcCcEEEEecCc-
Confidence 6799999999999999999888763 26776766554332222111122222232222 35689999999862
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccccc
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy 146 (374)
.....+...+.+.|.+ .+.++.++.|
T Consensus 76 ------------------~~s~~~~~~~~~~g~~-~~VID~Ss~f 101 (146)
T d1t4ba1 76 ------------------DYTNEIYPKLRESGWQ-GYWIDAASSL 101 (146)
T ss_dssp ------------------HHHHHHHHHHHHTTCC-CEEEECSSTT
T ss_pred ------------------hHHHHhhHHHHhcCCC-eecccCCccc
Confidence 1235556666777763 3444444444
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.32 E-value=1.1e-06 Score=66.84 Aligned_cols=72 Identities=15% Similarity=0.233 Sum_probs=61.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhh-ccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV-TKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~-~~~~d~vi~~a~ 99 (374)
|++.|.| .|.+|+++++.|.+.|++|++++.++.........+..++.+|.++++.+.++ ++++|.||-+.+
T Consensus 1 k~~iIiG-~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~ 73 (134)
T d2hmva1 1 KQFAVIG-LGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIG 73 (134)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCC
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcC
Confidence 5688897 59999999999999999999999988765555556678899999999998887 578998887765
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.25 E-value=3.5e-06 Score=64.67 Aligned_cols=112 Identities=15% Similarity=0.062 Sum_probs=75.7
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCccccc--ccccceeEEecccchhhHhhhccCCCEEEEcccccCC
Q 017290 28 RISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTE--DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGG 103 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~--~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~ 103 (374)
||.|+||+|.+|++++-.|..++. ++..++.++.+.... ................+..+.++++|+||..|+...
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~~- 80 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR- 80 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC-
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcCC-
Confidence 799999999999999999988874 788888765321111 000000001111223455667889999999999643
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
....+..+.+..|....+.+++.+.+++.+-+|.+-|
T Consensus 81 --~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt 117 (144)
T d1mlda1 81 --KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (144)
T ss_dssp --CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred --CCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 2233556778899999999999999998764444433
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.16 E-value=8.5e-06 Score=62.47 Aligned_cols=107 Identities=12% Similarity=0.031 Sum_probs=72.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCccc------cc------ccccceeEEecccchhhHhhhccCCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHM------TE------DMFCHEFHLVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~------~~------~~~~i~~~~~dl~~~~~~~~~~~~~d 92 (374)
|||.|+||+|.+|+.++-.|+.++ .++..+++++.... +. .....++....-.+ .+.++++|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d----~~~l~~aD 76 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDEN----LRIIDESD 76 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTC----GGGGTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcch----HHHhccce
Confidence 789999999999999999998888 48999998753210 00 00112221111112 23577999
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEe
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYA 140 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~ 140 (374)
+||-+||... -...+..+.+..|....+.+++...+++.+.++.+
T Consensus 77 vVVitAG~~~---~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV 121 (145)
T d1hyea1 77 VVIITSGVPR---KEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI 121 (145)
T ss_dssp EEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred EEEEeccccc---CCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence 9999999643 22234566788899999999999988876555433
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=98.15 E-value=7.8e-06 Score=62.81 Aligned_cols=107 Identities=15% Similarity=0.112 Sum_probs=70.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCcccc---------cccccceeEEecccchhhHhhhccCCCE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMT---------EDMFCHEFHLVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~---------~~~~~i~~~~~dl~~~~~~~~~~~~~d~ 93 (374)
..|||.|+|+ |++|..++-.|+.+| .+|..+++++..... ..........+|+ +.++++|+
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------~~~~~adi 75 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-------SDCKDADL 75 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-------GGGTTCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-------HHhccccE
Confidence 4689999995 999999999999987 589999987642110 0011123333343 23578999
Q ss_pred EEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 94 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 94 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
||.+++... ....+..+....|....+.+++.+.+++.+-++.+-|
T Consensus 76 vvitag~~~---~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt 121 (146)
T d1ez4a1 76 VVITAGAPQ---KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (146)
T ss_dssp EEECCCC-------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEeccccc---CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 999998643 2233456678889999999999999988765554433
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.14 E-value=9.7e-06 Score=62.17 Aligned_cols=94 Identities=18% Similarity=0.140 Sum_probs=56.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC---EEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH---YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
++|+|.|+||||++|+.+++.|.+++| ++..+..+.+.........-....-++. ...+.++|++|.+++..
T Consensus 1 q~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~-----~~~~~~~d~vf~a~p~~ 75 (144)
T d2hjsa1 1 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVD-----SFDFSSVGLAFFAAAAE 75 (144)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGG-----GCCGGGCSEEEECSCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccch-----hhhhccceEEEecCCcc
Confidence 358999999999999999999976654 6766655443322211111111111211 22345789998887521
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecc
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~ 143 (374)
....+...+.+.|+ ++|=.|+.
T Consensus 76 -------------------~s~~~~~~~~~~g~-~VID~Ss~ 97 (144)
T d2hjsa1 76 -------------------VSRAHAERARAAGC-SVIDLSGA 97 (144)
T ss_dssp -------------------HHHHHHHHHHHTTC-EEEETTCT
T ss_pred -------------------hhhhhccccccCCc-eEEeechh
Confidence 13444555666775 67766664
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=98.09 E-value=2.3e-05 Score=59.91 Aligned_cols=94 Identities=18% Similarity=0.144 Sum_probs=55.0
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC-C---EEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG-H---YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g-~---~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
|||.|+||||++|+.+++.|+++. | ++..++.+..........+-.....+..+ ...++++|+||.|.+.-
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~~~~~~~~----~~~~~~~DvvF~alp~~- 75 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFD----IESLKQLDAVITCQGGS- 75 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCCBCEETTC----HHHHTTCSEEEECSCHH-
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcceeeecccc----hhhhccccEEEEecCch-
Confidence 789999999999999999988753 3 55555544322111111111111112222 23357899999998621
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEeecc
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYASSA 143 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~Ss~ 143 (374)
-+..+...+.+.|.+ .+|=.|+.
T Consensus 76 ------------------~s~~~~~~l~~~g~~~~VIDlSsd 99 (147)
T d1mb4a1 76 ------------------YTEKVYPALRQAGWKGYWIDAAST 99 (147)
T ss_dssp ------------------HHHHHHHHHHHTTCCSEEEESSST
T ss_pred ------------------HHHHHhHHHHHcCCceEEEeCCcc
Confidence 134566667777864 45555553
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.09 E-value=4.1e-06 Score=66.87 Aligned_cols=73 Identities=12% Similarity=0.043 Sum_probs=54.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc--ccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM--FCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
.|+|+|.|| |.+|+++++.|.++||+|++++|+..+...... ........+..+.......+...|.++.+..
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~ 76 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP 76 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeecc
Confidence 589999985 999999999999999999999999865433211 1223344555566666777778888887664
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=98.08 E-value=7.4e-06 Score=63.62 Aligned_cols=122 Identities=14% Similarity=0.080 Sum_probs=78.3
Q ss_pred CCCCCCCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccccc--c-cee--EEecccchhhHhhhccCCCE
Q 017290 20 PYWPSEKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDMF--C-HEF--HLVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 20 ~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~--~-i~~--~~~dl~~~~~~~~~~~~~d~ 93 (374)
|+++.+.+||.|+|+ |.+|+.++-.|...+. ++.+++.++......... . ... ...........+..++++|+
T Consensus 1 ~~~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adi 79 (154)
T d1pzga1 1 PALVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADC 79 (154)
T ss_dssp CCCCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSE
T ss_pred CccccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCe
Confidence 456667899999996 9999999988877774 899998876532111000 0 000 00011111233556789999
Q ss_pred EEEcccccCCccc--ccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 94 VFNLAADMGGMGF--IQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 94 vi~~a~~~~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
||.+++.....+. ...........|....+.+++.+.+.+.+-++.+-|
T Consensus 80 Vvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs 130 (154)
T d1pzga1 80 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT 130 (154)
T ss_dssp EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred EEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 9999986532221 112445677789999999999999988765554433
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.97 E-value=2.4e-05 Score=59.83 Aligned_cols=111 Identities=18% Similarity=0.097 Sum_probs=71.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHh-C--CCEEEEEeCCCCcccc---cccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 27 LRISVTGAGGFIASHIARRLKS-E--GHYIIASDWKKNEHMT---EDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~~---~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
|||.|+|++|.+|++++-.|.. . ..++..++..+..... ...........-+...+. .+.++++|+||.+||.
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~-~~~~~~aDvvvitaG~ 79 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDA-TPALEGADVVLISAGV 79 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCC-HHHHTTCSEEEECCSC
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCC-ccccCCCCEEEECCCc
Confidence 7999999999999999987753 3 4689999875432100 000000000111111222 2357799999999996
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCe-EEEee
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKR-FFYAS 141 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~-~i~~S 141 (374)
... ...+..+....|....+.+.+.+.+.+.+. +|.+|
T Consensus 80 ~~k---~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt 118 (145)
T d2cmda1 80 RRK---PGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT 118 (145)
T ss_dssp CCC---TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred cCC---CCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence 432 233556778889999999999999888664 44443
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.94 E-value=4.6e-06 Score=65.77 Aligned_cols=71 Identities=14% Similarity=0.092 Sum_probs=47.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccccc--ceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFC--HEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
|||+|+|+ |.+|+.++..|.+.||+|++++|.+.......... .......+ .......+..+|+||.+.-.
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~iii~vka 73 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESL--TANDPDFLATSDLLLVTLKA 73 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEE--EESCHHHHHTCSEEEECSCG
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCcccccccc--ccchhhhhcccceEEEeecc
Confidence 89999996 99999999999999999999999876533221111 01100000 11122344589999998763
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.93 E-value=4.9e-05 Score=58.42 Aligned_cols=106 Identities=20% Similarity=0.189 Sum_probs=73.2
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCccccc----------ccccceeEEecccchhhHhhhccCC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTE----------DMFCHEFHLVDLRVMDNCLKVTKGV 91 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----------~~~~i~~~~~dl~~~~~~~~~~~~~ 91 (374)
+..+||.|+|+ |.+|++++-.|+..+. ++..+++.+...... ....+.+...|. +.++++
T Consensus 4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~da 75 (148)
T d1ldna1 4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDA 75 (148)
T ss_dssp TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTC
T ss_pred CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccc
Confidence 45679999996 9999999999999875 899999876531100 011122222222 357789
Q ss_pred CEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC-eEEEe
Q 017290 92 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYA 140 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~ 140 (374)
|+||.+++... .......+....|....+.+++.+.+++.+ .+|.+
T Consensus 76 Dvvvitag~~~---~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivv 122 (148)
T d1ldna1 76 DLVVICAGANQ---KPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVA 122 (148)
T ss_dssp SEEEECCSCCC---CTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred eeEEEeccccc---ccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEe
Confidence 99999998643 223345667788999999999998888766 44433
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.87 E-value=4.3e-05 Score=59.09 Aligned_cols=43 Identities=23% Similarity=0.224 Sum_probs=38.4
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM 64 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 64 (374)
+...++||.|+||.|.+|+.+++.|.++||+|++++|+.....
T Consensus 5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~ 47 (152)
T d2pv7a2 5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA 47 (152)
T ss_dssp SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH
T ss_pred cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccccc
Confidence 5567899999999999999999999999999999999876543
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.87 E-value=1.8e-05 Score=62.24 Aligned_cols=66 Identities=20% Similarity=0.260 Sum_probs=45.8
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|||.|.| .|.+|+.+++.|.++||+|++++|+++........++.-...+ ..+.++++|+||-+..
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~------~~~~~~~~DiIilavp 66 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQ------DLSLLQTAKIIFLCTP 66 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEES------CGGGGTTCSEEEECSC
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeee------ecccccccccccccCc
Confidence 7899998 6999999999999999999999998654322222221111111 1235678999987653
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=97.81 E-value=3.2e-05 Score=61.63 Aligned_cols=100 Identities=18% Similarity=0.164 Sum_probs=56.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCCC-Cccc-cc-c--cccce-eEEecccchhhHhhhccCCCEEEEcc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSE-GHYIIASDWKK-NEHM-TE-D--MFCHE-FHLVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~-~~~~-~~-~--~~~i~-~~~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
|+||.|.|||||+|+.+++.|.++ .++|..+.... .... .. . ..... .........+.......++|++|.+.
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvf~al 80 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDVRDFSADVDVVFLAT 80 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCGGGTCTTCCEEEECS
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhhhhhhcccceeeccc
Confidence 789999999999999999999997 56776654322 1111 00 0 00000 00000111122233446889999987
Q ss_pred cccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccc
Q 017290 99 ADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~v 145 (374)
+.. ....+.....+.++ ++|=.|+..=
T Consensus 81 p~~-------------------~s~~~~~~~~~~~~-~vIDlSadfR 107 (179)
T d2g17a1 81 AHE-------------------VSHDLAPQFLQAGC-VVFDLSGAFR 107 (179)
T ss_dssp CHH-------------------HHHHHHHHHHHTTC-EEEECSSTTS
T ss_pred cch-------------------hHHHHhhhhhhcCc-eeeccccccc
Confidence 621 12334455566665 7887777543
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.77 E-value=2.9e-05 Score=61.36 Aligned_cols=114 Identities=17% Similarity=0.125 Sum_probs=71.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhC---CC----EEEEEeCCCCccccc--c---cccceeEEecccchhhHhhhccCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSE---GH----YIIASDWKKNEHMTE--D---MFCHEFHLVDLRVMDNCLKVTKGVD 92 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~---g~----~V~~~~r~~~~~~~~--~---~~~i~~~~~dl~~~~~~~~~~~~~d 92 (374)
+..||.|+||+|.||++++-.|++. |. .++.++......... . ...............+..+.++++|
T Consensus 23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aD 102 (175)
T d7mdha1 23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVD 102 (175)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCCc
Confidence 4468999999999999999999874 22 456666554321100 0 0000000001111223456788999
Q ss_pred EEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCC-C-eEEEee
Q 017290 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV-K-RFFYAS 141 (374)
Q Consensus 93 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-~-~~i~~S 141 (374)
+||-.++... -......+.+..|....+.+.+++.++.. . +++.+|
T Consensus 103 vVvi~ag~~r---kpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 103 WALLIGAKPR---GPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp EEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred eEEEeeccCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 9999998653 23345567788899999999999988643 2 455554
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.76 E-value=8.6e-05 Score=53.78 Aligned_cols=69 Identities=17% Similarity=0.217 Sum_probs=55.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFN 96 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~ 96 (374)
...||.|.| +|++|+.++....+-|++|++++.+++.....- .-.++.+|+.|.+.+.++.+ ++|+|-.
T Consensus 10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v--a~~~i~~~~~d~~~l~~~~~~~~~DviT~ 80 (111)
T d1kjqa2 10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHV--AHRSHVINMLDGDALRRVVELEKPHYIVP 80 (111)
T ss_dssp TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG--SSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc--CCeEEECCCCCHHHHHHHHHhhCCceEEE
Confidence 457899999 799999999999999999999998876433321 22678899999999988775 6788853
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=97.75 E-value=5.5e-05 Score=56.41 Aligned_cols=72 Identities=10% Similarity=0.205 Sum_probs=53.5
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEe-CCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCcc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASD-WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMG 105 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~ 105 (374)
|||.|.|++|.+|+.|++.+.+.++++.+.. ++ . ...+.++|+||++..+.
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~--------------------~----~~~~~~~DVvIDFS~p~---- 52 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVN--------------------G----VEELDSPDVVIDFSSPE---- 52 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETT--------------------E----EEECSCCSEEEECSCGG----
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCC--------------------c----HHHhccCCEEEEecCHH----
Confidence 7899999999999999999988899876532 11 0 12245789999998642
Q ss_pred cccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 106 FIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 106 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
++...++.|.++++ .+|.-+|
T Consensus 53 ---------------~~~~~l~~~~~~~~-p~ViGTT 73 (128)
T d1vm6a3 53 ---------------ALPKTVDLCKKYRA-GLVLGTT 73 (128)
T ss_dssp ---------------GHHHHHHHHHHHTC-EEEECCC
T ss_pred ---------------HHHHHHHHHHhcCC-CEEEEcC
Confidence 35778899999997 5554444
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.71 E-value=2.7e-05 Score=63.43 Aligned_cols=73 Identities=21% Similarity=0.165 Sum_probs=48.7
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEE-------------ecccchhhHhhhccCCCE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHL-------------VDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~-------------~dl~~~~~~~~~~~~~d~ 93 (374)
|||.|.| .|++|..++..|++.||+|++++.++............+.. ..+.-..++.++++.+|+
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~ 79 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV 79 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCE
Confidence 7899997 89999999999999999999999875432211111001111 111122344556778999
Q ss_pred EEEcccc
Q 017290 94 VFNLAAD 100 (374)
Q Consensus 94 vi~~a~~ 100 (374)
+|.|.+.
T Consensus 80 i~i~VpT 86 (202)
T d1mv8a2 80 SFICVGT 86 (202)
T ss_dssp EEECCCC
T ss_pred EEEecCc
Confidence 9999874
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.70 E-value=4.4e-05 Score=59.18 Aligned_cols=111 Identities=14% Similarity=0.019 Sum_probs=68.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-------EEEEEeCCCCcccc---------cccccceeEEecccchhhHhhhc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-------YIIASDWKKNEHMT---------EDMFCHEFHLVDLRVMDNCLKVT 88 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~---------~~~~~i~~~~~dl~~~~~~~~~~ 88 (374)
++|||.|+||+|++|++++-.|+..+. ....+.-....... ........+.. .+...+.+
T Consensus 3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 78 (154)
T d1y7ta1 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEA----TDDPKVAF 78 (154)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE----ESCHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccccccccccc----CCchhhhc
Confidence 467999999999999999999987642 12222222111000 00001111111 22334678
Q ss_pred cCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCC-C-eEEEeec
Q 017290 89 KGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV-K-RFFYASS 142 (374)
Q Consensus 89 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-~-~~i~~Ss 142 (374)
+++|+||-++|... -...+..+.+..|....+.+.+.+.+... . .++.+|.
T Consensus 79 ~~advViitaG~~~---~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvsN 131 (154)
T d1y7ta1 79 KDADYALLVGAAPR---KAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGN 131 (154)
T ss_dssp TTCSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred ccccEEEeecCcCC---CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecC
Confidence 89999999999653 22334566788899999999999888543 2 4444443
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=97.69 E-value=5.4e-05 Score=58.98 Aligned_cols=99 Identities=15% Similarity=0.180 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhC-CCEEE-EEeCCCCcccccccccc-eeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSE-GHYII-ASDWKKNEHMTEDMFCH-EFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~-g~~V~-~~~r~~~~~~~~~~~~i-~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
.+.+||+|.|++|.+|+.+++.+.+. +.++. +++|............+ .....++.-.+.+..+++.+|+||.+..
T Consensus 2 ~s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~DViIDFs~- 80 (162)
T d1diha1 2 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTR- 80 (162)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSC-
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccceEEEecc-
Confidence 35689999999999999999999886 66765 44555433221110000 0000111222334456678999999975
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
-..+...++.|.+.++ .+|.=+|
T Consensus 81 ------------------p~~~~~~~~~a~~~~~-~~ViGTT 103 (162)
T d1diha1 81 ------------------PEGTLNHLAFCRQHGK-GMVIGTT 103 (162)
T ss_dssp ------------------HHHHHHHHHHHHHTTC-EEEECCC
T ss_pred ------------------HHHHHHHHHHHHhccc-eeEEecC
Confidence 3446778899999997 5554444
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.69 E-value=1.1e-05 Score=65.19 Aligned_cols=36 Identities=25% Similarity=0.520 Sum_probs=33.7
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
|||.|+||+|.+|++|++.|+++||+|++.+|++++
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~ 36 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEK 36 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 789999999999999999999999999999998754
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.68 E-value=0.00011 Score=55.78 Aligned_cols=101 Identities=14% Similarity=0.040 Sum_probs=69.6
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCccc------ccc-----cccceeEEecccchhhHhhhccCCCEE
Q 017290 28 RISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHM------TED-----MFCHEFHLVDLRVMDNCLKVTKGVDHV 94 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~------~~~-----~~~i~~~~~dl~~~~~~~~~~~~~d~v 94 (374)
||.|+||+|.+|++++-.|+.++. ++..++....... +.. .....+..+|. + .++++|+|
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~----~~~~aDiV 74 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---E----DTAGSDVV 74 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---G----GGTTCSEE
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---H----HhhhcCEE
Confidence 799999999999999999999875 7888886432111 000 11122333332 2 35799999
Q ss_pred EEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEE
Q 017290 95 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i 138 (374)
|-.|+... ....+..+.+..|....+.+.+...+.+.+-++
T Consensus 75 vitaG~~~---~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ 115 (142)
T d1o6za1 75 VITAGIPR---QPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYIS 115 (142)
T ss_dssp EECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEE
T ss_pred EEeccccc---ccCCchhhHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 99998543 222345667888999999999999998866443
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.67 E-value=0.00015 Score=55.22 Aligned_cols=103 Identities=16% Similarity=0.093 Sum_probs=70.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCcccccc----------cccceeEEecccchhhHhhhccCCCEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMTED----------MFCHEFHLVDLRVMDNCLKVTKGVDHV 94 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~----------~~~i~~~~~dl~~~~~~~~~~~~~d~v 94 (374)
|||.|+|+ |.+|++++..|+..+ .++..++.++....... .....+... .+ .+.++++|+|
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~----~~~~~dadvv 73 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--ND----YADTANSDIV 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CC----HHHhcCCeEE
Confidence 78999996 999999999999987 58999998876422110 001122211 11 2356799999
Q ss_pred EEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEE
Q 017290 95 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFY 139 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~ 139 (374)
|-+++.... ...+.......|....+.+++.+.+.+.+-++.
T Consensus 74 vitag~~~~---~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivi 115 (142)
T d1guza1 74 IITAGLPRK---PGMTREDLLMKNAGIVKEVTDNIMKHSKNPIII 115 (142)
T ss_dssp EECCSCCCC---TTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEE
T ss_pred EEEEecCCC---CCCchHHHHHHHHHHHHHHHHHhhccCCCeEEE
Confidence 999986432 223345667789988999999988887654443
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=97.65 E-value=0.001 Score=49.36 Aligned_cols=88 Identities=15% Similarity=0.177 Sum_probs=63.2
Q ss_pred CCCeEEEEcCc---chhHHHHHHHHHhCC-CEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 25 EKLRISVTGAG---GFIASHIARRLKSEG-HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 25 ~~~~ilItGat---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
++++|.|+|++ +..|..+++.|++.| ++|+.+..+..... .......+.++-..+|.++-+...
T Consensus 7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~------------G~~~y~sl~dlp~~vDlvvi~vp~ 74 (129)
T d2csua1 7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQ------------GVKAYKSVKDIPDEIDLAIIVVPK 74 (129)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEET------------TEECBSSTTSCSSCCSEEEECSCH
T ss_pred CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccC------------CeEeecchhhcCCCCceEEEecCh
Confidence 55899999998 999999999998766 79998875533211 112223344444578998887752
Q ss_pred cCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecc
Q 017290 101 MGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~ 143 (374)
..+..+++.|.+.|++.++.+|+.
T Consensus 75 -------------------~~~~~~~~~~~~~g~~~~vi~s~G 98 (129)
T d2csua1 75 -------------------RFVKDTLIQCGEKGVKGVVIITAG 98 (129)
T ss_dssp -------------------HHHHHHHHHHHHHTCCEEEECCCS
T ss_pred -------------------HHhHHHHHHHHHcCCCEEEEeccc
Confidence 335678889999999988888874
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=97.65 E-value=2.2e-05 Score=62.12 Aligned_cols=72 Identities=19% Similarity=0.177 Sum_probs=42.8
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcccccc--cccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTED--MFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~--~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|+||.|+||||++|+.+++.|.++. .++..+..+.+...... .... .-..++.. .....+.+++|+||.+..
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~-~~~~~~~~-~~~~~~~~~~dvvf~a~p 75 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPST-LENSILSE-FDPEKVSKNCDVLFTALP 75 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGG-CCCCBCBC-CCHHHHHHHCSEEEECCS
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchh-hccccccc-cCHhHhccccceEEEccc
Confidence 6899999999999999999998864 57776654433222111 0000 00011111 112233457899998876
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.65 E-value=7.6e-05 Score=56.69 Aligned_cols=103 Identities=16% Similarity=0.085 Sum_probs=70.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCccccc---------ccccceeEEecccchhhHhhhccCCCEEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMTE---------DMFCHEFHLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~---------~~~~i~~~~~dl~~~~~~~~~~~~~d~vi 95 (374)
|||.|+|+ |.+|+.++-.|+.++ .++..+++++...... .........+| .+.++++|+||
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~-------~~~~~~adivv 72 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-------YADLKGSDVVI 72 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-------GGGGTTCSEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc-------HHHhcCCCEEE
Confidence 78999996 999999999888876 4899999876431110 00011222222 23467999999
Q ss_pred EcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEe
Q 017290 96 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYA 140 (374)
Q Consensus 96 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~ 140 (374)
-+|+.... ......+.+..|....+.+.+...+.+.+-++.+
T Consensus 73 itag~~~~---~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aiviv 114 (140)
T d1a5za1 73 VAAGVPQK---PGETRLQLLGRNARVMKEIARNVSKYAPDSIVIV 114 (140)
T ss_dssp ECCCCCCC---SSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EecccccC---CCcchhhhhccccchHHHHHHHHHhcCCCcEEEE
Confidence 99986432 2234456677899999999999999886655544
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.61 E-value=9.7e-05 Score=56.21 Aligned_cols=101 Identities=16% Similarity=0.102 Sum_probs=65.8
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCccccc----c-----cccceeEEecccchhhHhhhccCCCEEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTE----D-----MFCHEFHLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~-----~~~i~~~~~dl~~~~~~~~~~~~~d~vi 95 (374)
+||.|+|+ |.+|+.++-.|+.++. ++..+++++...... . ........+| .+.++++|+||
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-------~~~~~~adivv 73 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-------YSDVKDCDVIV 73 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-------GGGGTTCSEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc-------HHHhCCCceEE
Confidence 58999996 9999999999999874 899999887642211 0 0011111111 23567899999
Q ss_pred EcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEE
Q 017290 96 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138 (374)
Q Consensus 96 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i 138 (374)
-+|+... ....+..+....|....+.+++.+.+++.+-++
T Consensus 74 itag~~~---~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ 113 (142)
T d1y6ja1 74 VTAGANR---KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVI 113 (142)
T ss_dssp ECCCC---------CHHHHHHHHHHHHHHHHHHHHHHCCSCEE
T ss_pred Eeccccc---CcCcchhHHhhHHHHHHHHHHHHhhccCCCceE
Confidence 9998543 222345566788999999999999998765433
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.58 E-value=0.00012 Score=57.20 Aligned_cols=36 Identities=19% Similarity=0.258 Sum_probs=33.2
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
|++|.+.| .|.+|+.+++.|+++||+|++.+|++..
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~ 36 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSA 36 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhh
Confidence 68899998 8999999999999999999999998654
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.56 E-value=5.6e-05 Score=59.68 Aligned_cols=75 Identities=13% Similarity=0.133 Sum_probs=53.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
....+|||+||+|-+|...++.+...|.+|+++++++++.......+...+ .|..+...-....+++|+||++.|
T Consensus 26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~g~D~v~d~~G 100 (171)
T d1iz0a2 26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEA-ATYAEVPERAKAWGGLDLVLEVRG 100 (171)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEE-EEGGGHHHHHHHTTSEEEEEECSC
T ss_pred CCCCEEEEEeccccchhhhhhhhccccccccccccccccccccccccccee-eehhhhhhhhhccccccccccccc
Confidence 356889999999999999999998899999999988765444333344332 233333222233458999999876
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.53 E-value=0.0001 Score=56.83 Aligned_cols=65 Identities=20% Similarity=0.199 Sum_probs=47.9
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|||.|+| .|.+|+.+++.|+++||+|++.++.+.........++.+. +...++++++|+||-|..
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------~~~~e~~~~~diIi~~v~ 65 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT-------ETSEEDVYSCPVVISAVT 65 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE-------ECCHHHHHTSSEEEECSC
T ss_pred CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhccccc-------ccHHHHHhhcCeEEEEec
Confidence 7899997 8999999999999999999999877665433222222221 123456778999998875
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.50 E-value=4.2e-05 Score=61.10 Aligned_cols=75 Identities=25% Similarity=0.216 Sum_probs=53.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchh---hHhhhc--cCCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD---NCLKVT--KGVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~---~~~~~~--~~~d~vi~~a 98 (374)
..+.+|||+||+|-+|...++.+...|.+|+++++++++.......+...+ .|..+.+ .+.+.. +++|++|++.
T Consensus 24 ~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~d~~ 102 (183)
T d1pqwa_ 24 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYV-GDSRSVDFADEILELTDGYGVDVVLNSL 102 (183)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEE-EETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred CCCCEEEEECCCCCcccccchhhccccccceeeeccccccccccccccccc-ccCCccCHHHHHHHHhCCCCEEEEEecc
Confidence 456899999999999999999998889999999987654333333343332 3444433 333333 3799999998
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
+
T Consensus 103 g 103 (183)
T d1pqwa_ 103 A 103 (183)
T ss_dssp C
T ss_pred c
Confidence 7
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.47 E-value=0.00095 Score=51.44 Aligned_cols=108 Identities=11% Similarity=-0.007 Sum_probs=72.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccc----c---c-cccceeEEecccchhhHhhhccCCCEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMT----E---D-MFCHEFHLVDLRVMDNCLKVTKGVDHV 94 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~---~-~~~i~~~~~dl~~~~~~~~~~~~~d~v 94 (374)
..+||.|+|+ |.+|+.++-.|...|. ++..+++++..... . . ......+.. ..+ .+.++++|+|
T Consensus 19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~-~~d----~~~~~~adiV 92 (160)
T d1i0za1 19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVA-DKD----YSVTANSKIV 92 (160)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEE-CSS----GGGGTTCSEE
T ss_pred CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEe-ccc----hhhcccccEE
Confidence 4579999995 9999999999999986 89999987543110 0 0 001111111 112 2246789999
Q ss_pred EEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCe-EEEee
Q 017290 95 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKR-FFYAS 141 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~-~i~~S 141 (374)
|..|+.... ...+..+....|....+.++....+.+.+- +|.+|
T Consensus 93 VitAg~~~~---~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt 137 (160)
T d1i0za1 93 VVTAGVRQQ---EGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS 137 (160)
T ss_dssp EECCSCCCC---TTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred EEecCCccc---cCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 999996532 233456677889999999999998888664 44443
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=97.45 E-value=0.00011 Score=57.34 Aligned_cols=65 Identities=12% Similarity=0.218 Sum_probs=48.8
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|||.|.| .|.+|+.+++.|+++||+|++.+|+++........+... .+...++.+++|+||-|..
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~-------~~~~~e~~~~~d~ii~~v~ 65 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET-------ASTAKAIAEQCDVIITMLP 65 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhh-------cccHHHHHhCCCeEEEEcC
Confidence 7899998 899999999999999999999999876543333222221 1234556678999999875
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.45 E-value=0.00037 Score=52.80 Aligned_cols=106 Identities=12% Similarity=-0.006 Sum_probs=71.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCccccc----c------cccceeEEecccchhhHhhhccCCCEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMTE----D------MFCHEFHLVDLRVMDNCLKVTKGVDHV 94 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~----~------~~~i~~~~~dl~~~~~~~~~~~~~d~v 94 (374)
|||.|+|+ |.+|.+++-.|+.+| .++..++++++..... . .....+... .++ +.++++|+|
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~-----~d~-~~~~~adiV 73 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG-----ADY-SLLKGSEII 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE-----SCG-GGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC-----CCH-HHhccccEE
Confidence 79999996 999999999998887 4799999876532110 0 001111111 111 357799999
Q ss_pred EEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 95 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 95 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
|-.|+... ....+..+....|......+.+.+.+.+.+-++.+-|
T Consensus 74 vitag~~~---~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt 118 (142)
T d1ojua1 74 VVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (142)
T ss_dssp EECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred EEeccccC---CCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence 99998543 2233456677789999999999999988664444433
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.41 E-value=7.7e-05 Score=57.73 Aligned_cols=110 Identities=15% Similarity=0.046 Sum_probs=67.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC---C----EEEEEeCCCCccccc---------ccccceeEEecccchhhHhhhc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG---H----YIIASDWKKNEHMTE---------DMFCHEFHLVDLRVMDNCLKVT 88 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g---~----~V~~~~r~~~~~~~~---------~~~~i~~~~~dl~~~~~~~~~~ 88 (374)
.+|||.|+||+|.+|++++-.|...+ . +++.++.+....... .......+. -.....+.+
T Consensus 2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~ 77 (154)
T d5mdha1 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVI----ATDKEEIAF 77 (154)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEE----EESCHHHHT
T ss_pred CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccc----cCccccccc
Confidence 45899999999999999999887653 1 355555443321100 000111111 112234577
Q ss_pred cCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhC-CCC-eEEEee
Q 017290 89 KGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRIS-GVK-RFFYAS 141 (374)
Q Consensus 89 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~~-~~i~~S 141 (374)
+++|+||-+++.... ...+..+.+..|....+.+.+...++ +-. .+|.+|
T Consensus 78 ~~~dvVVitag~~~~---~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs 129 (154)
T d5mdha1 78 KDLDVAILVGSMPRR---DGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG 129 (154)
T ss_dssp TTCSEEEECCSCCCC---TTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred CCceEEEEecccCCC---CCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence 899999999986542 22345567888999999999888764 433 344444
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.40 E-value=0.00054 Score=47.78 Aligned_cols=85 Identities=13% Similarity=0.013 Sum_probs=58.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-cccccceeEEecccchhhHhhhccCCCEEEEcccccCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-EDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGG 103 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~ 103 (374)
++++|+|.|. |-.|.++++.|.+.|++|++.+.+...... .....+.+..+... . ..+.++|.||-.-|...
T Consensus 4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~d~vi~SPGi~~- 76 (93)
T d2jfga1 4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLN-D----EWLMAADLIVASPGIAL- 76 (93)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESBCC-H----HHHHHCSEEEECTTSCT-
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhhccceeecccc-h----hhhccCCEEEECCCCCC-
Confidence 5789999995 889999999999999999999987654322 22223444444422 1 23457799998877432
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCC
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGV 134 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~ 134 (374)
. ..++..+++.++
T Consensus 77 -----~-------------~~~~~~a~~~gi 89 (93)
T d2jfga1 77 -----A-------------HPSLSAAADAGI 89 (93)
T ss_dssp -----T-------------SHHHHHHHHTTC
T ss_pred -----C-------------CHHHHHHHHcCC
Confidence 1 246778888887
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.39 E-value=0.00076 Score=51.05 Aligned_cols=103 Identities=15% Similarity=0.111 Sum_probs=70.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccc----cc----c-ccceeEEecccchhhHhhhccCCCEEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMT----ED----M-FCHEFHLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~----~-~~i~~~~~dl~~~~~~~~~~~~~d~vi 95 (374)
.||.|+|+ |.+|++++-.|+.++. ++..+++++..... .. . ....+... +++ +.++++|+||
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~-----~~~-~~~~daDvVV 74 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS-----DDP-EICRDADMVV 74 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE-----SCG-GGGTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC-----CCH-HHhhCCcEEE
Confidence 58999996 9999999999998875 89999987643211 00 0 01122111 112 2467899999
Q ss_pred EcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEE
Q 017290 96 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFY 139 (374)
Q Consensus 96 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~ 139 (374)
-+|+.... ...+..+....|....+.++..+.+++.+-++.
T Consensus 75 itaG~~~~---~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~i 115 (143)
T d1llda1 75 ITAGPRQK---PGQSRLELVGATVNILKAIMPNLVKVAPNAIYM 115 (143)
T ss_dssp ECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EecccccC---CCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEE
Confidence 99996432 233445678889999999999999888654443
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.38 E-value=0.00063 Score=51.74 Aligned_cols=106 Identities=11% Similarity=0.072 Sum_probs=67.7
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCccccc----------ccccceeEEecccchhhHhhhccCCCEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMTE----------DMFCHEFHLVDLRVMDNCLKVTKGVDHV 94 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~----------~~~~i~~~~~dl~~~~~~~~~~~~~d~v 94 (374)
|||.|+| .|.+|+.++-.|+.+| .++..+++++...... ......+...| . +.++++|+|
T Consensus 2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~----~~l~~adiV 73 (146)
T d1hyha1 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALADADVV 73 (146)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGTTCSEE
T ss_pred CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---H----HHhccccEE
Confidence 7999999 5999999999999887 4899999876531110 00111222222 2 246789999
Q ss_pred EEcccccCCcc-cccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEe
Q 017290 95 FNLAADMGGMG-FIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYA 140 (374)
Q Consensus 95 i~~a~~~~~~~-~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~ 140 (374)
|-+||...... ....+..+....|....+.+.+.+++.+.+-++.+
T Consensus 74 VitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aiviv 120 (146)
T d1hyha1 74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVV 120 (146)
T ss_dssp EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred EEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence 99998532100 11112344567799999999999999886644444
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.37 E-value=0.00097 Score=48.27 Aligned_cols=95 Identities=12% Similarity=0.065 Sum_probs=64.6
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccc--ccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE--DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
+..++++|||+| +|.+|..-++.|++.|.+|++++......... ...++++....+.. ..+.+++.|+.+.+
T Consensus 8 l~l~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~dl~~~~lv~~at~ 81 (113)
T d1pjqa1 8 CQLRDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDE-----TLLDSCWLAIAATD 81 (113)
T ss_dssp ECCBTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCG-----GGGTTCSEEEECCS
T ss_pred EEeCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCH-----HHhCCCcEEeecCC
Confidence 356789999999 79999999999999999999998765432221 12245555555443 23557788776654
Q ss_pred ccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 100 DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
+-.....+...|++.++ .|++..
T Consensus 82 ------------------d~~~n~~i~~~a~~~~i--lVNv~D 104 (113)
T d1pjqa1 82 ------------------DDTVNQRVSDAAESRRI--FCNVVD 104 (113)
T ss_dssp ------------------CHHHHHHHHHHHHHTTC--EEEETT
T ss_pred ------------------CHHHHHHHHHHHHHcCC--EEEeCC
Confidence 12223467788888885 566544
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.37 E-value=5e-05 Score=60.66 Aligned_cols=75 Identities=15% Similarity=0.216 Sum_probs=52.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccch---hhHhhhc--cCCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVM---DNCLKVT--KGVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~---~~~~~~~--~~~d~vi~~a 98 (374)
....+|||+||+|-+|...++.....|.+|+++++++++.......+...+ .|..+. +.+.+.. +++|+||++.
T Consensus 28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~v-i~~~~~~~~~~~~~~~~~~Gvd~v~D~v 106 (182)
T d1v3va2 28 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAA-FNYKTVNSLEEALKKASPDGYDCYFDNV 106 (182)
T ss_dssp CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE-EETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhh-cccccccHHHHHHHHhhcCCCceeEEec
Confidence 457899999999999999999999999999999988765333333333322 222333 2333332 3799999998
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
+
T Consensus 107 G 107 (182)
T d1v3va2 107 G 107 (182)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.36 E-value=0.00021 Score=56.13 Aligned_cols=75 Identities=11% Similarity=0.066 Sum_probs=50.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccce-eEEeccc--chhhHhhhc-----cCCCEEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHE-FHLVDLR--VMDNCLKVT-----KGVDHVF 95 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~-~~~~dl~--~~~~~~~~~-----~~~d~vi 95 (374)
....+|+|+| +|-+|...++.+...|.+|+++++++.+.......+.. .+..|.. +.....+.+ +++|+||
T Consensus 25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vi 103 (170)
T d1e3ja2 25 QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTI 103 (170)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred CCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceee
Confidence 3457899997 78999999999988999999999987654333222322 2222222 222222222 3799999
Q ss_pred Eccc
Q 017290 96 NLAA 99 (374)
Q Consensus 96 ~~a~ 99 (374)
.+++
T Consensus 104 d~~g 107 (170)
T d1e3ja2 104 DCSG 107 (170)
T ss_dssp ECSC
T ss_pred ecCC
Confidence 9998
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.36 E-value=0.00079 Score=50.94 Aligned_cols=105 Identities=15% Similarity=0.077 Sum_probs=66.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccc----------cccceeEEecccchhhHhhhccCCCEEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTED----------MFCHEFHLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~----------~~~i~~~~~dl~~~~~~~~~~~~~d~vi 95 (374)
+||.|+|+ |.+|.+++-.|..++. ++..++.++....... .....+... .| . +.++++|+||
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d---~-~~~~~advvv 74 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NN---Y-ADTANSDVIV 74 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC---G-GGGTTCSEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--Cc---H-HHhcCCCEEE
Confidence 68999995 9999999988887764 8889988765321100 001111111 11 1 2357899999
Q ss_pred EcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEee
Q 017290 96 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141 (374)
Q Consensus 96 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~S 141 (374)
-+|+.... ...+..+....|....+.+++...+++.+-++.+.
T Consensus 75 itag~~~~---~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivv 117 (142)
T d1uxja1 75 VTSGAPRK---PGMSREDLIKVNADITRACISQAAPLSPNAVIIMV 117 (142)
T ss_dssp ECCSCC------------CHHHHHHHHHHHHHHHGGGCTTCEEEEC
T ss_pred EeeeccCC---cCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEe
Confidence 99996432 23344566788999999999999998866555443
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.36 E-value=8.3e-05 Score=58.82 Aligned_cols=75 Identities=16% Similarity=0.156 Sum_probs=52.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhh---c--cCCCEEEEcc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV---T--KGVDHVFNLA 98 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~---~--~~~d~vi~~a 98 (374)
....+|||+||+|-+|...++.+...|.+|+++++++++.......+... ..|..+.+..+++ . +++|+||++.
T Consensus 27 ~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~-vi~~~~~~~~~~i~~~t~~~g~d~v~d~~ 105 (174)
T d1yb5a2 27 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHE-VFNHREVNYIDKIKKYVGEKGIDIIIEML 105 (174)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-EEETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred CCCCEEEEEeccccccccccccccccCcccccccccccccccccccCccc-ccccccccHHHHhhhhhccCCceEEeecc
Confidence 45679999999999999999999889999999998765433222333332 2355544433332 2 2689999998
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
+
T Consensus 106 g 106 (174)
T d1yb5a2 106 A 106 (174)
T ss_dssp H
T ss_pred c
Confidence 7
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.34 E-value=0.0011 Score=50.99 Aligned_cols=24 Identities=21% Similarity=0.429 Sum_probs=21.8
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCC
Q 017290 28 RISVTGAGGFIASHIARRLKSEGH 51 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~ 51 (374)
||.|+|||||+|.++++.|.++.+
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~f 26 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTL 26 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred EEEEECCCcHHHHHHHHHHHcCCC
Confidence 799999999999999998888764
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.33 E-value=0.00022 Score=58.54 Aligned_cols=74 Identities=14% Similarity=-0.012 Sum_probs=51.8
Q ss_pred CCCCeEEEEcC----------------cchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchh----h
Q 017290 24 SEKLRISVTGA----------------GGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD----N 83 (374)
Q Consensus 24 ~~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~----~ 83 (374)
..+|+||||+| ||..|.+|++++..+|++|+++....+..... .+.++.. ...+ .
T Consensus 4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p~---~~~~~~~--~t~~~m~~~ 78 (223)
T d1u7za_ 4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPP---FVKRVDV--MTALEMEAA 78 (223)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCT---TEEEEEC--CSHHHHHHH
T ss_pred cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCccc---cccccee--hhhHHHHHH
Confidence 35678888776 69999999999999999999998766533221 2333322 2222 3
Q ss_pred HhhhccCCCEEEEcccccC
Q 017290 84 CLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 84 ~~~~~~~~d~vi~~a~~~~ 102 (374)
+.+.+..+|++|++|+...
T Consensus 79 ~~~~~~~~D~~i~aAAvsD 97 (223)
T d1u7za_ 79 VNASVQQQNIFIGCAAVAD 97 (223)
T ss_dssp HHHHGGGCSEEEECCBCCS
T ss_pred HHhhhccceeEeeeechhh
Confidence 3344568999999999754
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=97.32 E-value=0.00011 Score=58.52 Aligned_cols=76 Identities=21% Similarity=0.155 Sum_probs=44.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcccccccc-cceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDMF-CHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
.++.||.|+|||||+|+.+++.|.++. .++..+..+.+........ .......+..........+.++|+||.+..
T Consensus 3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~alp 80 (183)
T d2cvoa1 3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVKDADFSNVDAVFCCLP 80 (183)
T ss_dssp SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBCGGGCCGGGCSEEEECCS
T ss_pred CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccchhhhhhhhcccceeeeccc
Confidence 356789999999999999999998874 5777665433321111100 000001111112222334468999998876
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.30 E-value=5.9e-05 Score=58.67 Aligned_cols=72 Identities=17% Similarity=0.182 Sum_probs=53.5
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccc-cccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
..++++|||+|+ |-+|+.+++.|.+.|. +|++..|+..+..... ..+.. ..+.+++.+.+..+|+||.+.+.
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-----~~~~~~~~~~l~~~Divi~atss 94 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-----AVRFDELVDHLARSDVVVSATAA 94 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-----ECCGGGHHHHHHTCSEEEECCSS
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-----cccchhHHHHhccCCEEEEecCC
Confidence 457899999996 9999999999999997 6999998865432221 11222 22345677788899999999874
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=97.28 E-value=0.00044 Score=54.18 Aligned_cols=68 Identities=15% Similarity=0.137 Sum_probs=43.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCcccccccccc-eeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHMTEDMFCH-EFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~i-~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|++|+|+| .|.+|..+++.|.+.|+ +|+++++++.........+. .....+. + ......+|.||.+..
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~---~--~~~~~~~dlIila~p 71 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSI---A--KVEDFSPDFVMLSSP 71 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCG---G--GGGGTCCSEEEECSC
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhh---h--hhhccccccccccCC
Confidence 57899998 79999999999999985 78888887654322221111 1111111 1 122247898888875
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.27 E-value=0.00051 Score=54.35 Aligned_cols=73 Identities=14% Similarity=-0.018 Sum_probs=49.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccc--------cceeEEecccchhhHhhhccCCCEEEEc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMF--------CHEFHLVDLRVMDNCLKVTKGVDHVFNL 97 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--------~i~~~~~dl~~~~~~~~~~~~~d~vi~~ 97 (374)
.|||.|+| +|.+|..++..|.++||+|.+++|++......... .............++.+.++++|+||.+
T Consensus 1 sk~iaIiG-aG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~ 79 (184)
T d1bg6a2 1 SKTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 79 (184)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence 48999999 59999999999999999999999986532211110 1111111111123456778899999998
Q ss_pred cc
Q 017290 98 AA 99 (374)
Q Consensus 98 a~ 99 (374)
..
T Consensus 80 v~ 81 (184)
T d1bg6a2 80 VP 81 (184)
T ss_dssp SC
T ss_pred Ec
Confidence 64
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.26 E-value=0.00061 Score=52.31 Aligned_cols=71 Identities=11% Similarity=0.047 Sum_probs=57.4
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc----ccccccceeEEecccchhhHhhhc-cCCCEEEEccc
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM----TEDMFCHEFHLVDLRVMDNCLKVT-KGVDHVFNLAA 99 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~i~~~~~dl~~~~~~~~~~-~~~d~vi~~a~ 99 (374)
+|+|+| .|-+|..+++.|.+.|++|++++..+.... .....++.++.||.++++.+.++- ++++.||-+..
T Consensus 5 HiII~G-~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~ 80 (153)
T d1id1a_ 5 HFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred EEEEEC-CCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence 589998 599999999999999999999998764321 222346889999999999887764 68999998875
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.24 E-value=0.001 Score=51.20 Aligned_cols=104 Identities=12% Similarity=0.054 Sum_probs=69.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCCccc----ccc----ccc-ceeEEecccchhhHhhhccCCCE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKNEHM----TED----MFC-HEFHLVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~----~~~----~~~-i~~~~~dl~~~~~~~~~~~~~d~ 93 (374)
...||.|+|+ |.+|.+++-.|...|. ++..+++++.... +.. ... ...+.. .+. +.++++|+
T Consensus 18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~--~d~----~~~~~adi 90 (159)
T d2ldxa1 18 SRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFG--KDY----NVSANSKL 90 (159)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEE--SSG----GGGTTEEE
T ss_pred CCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEec--cch----hhhccccE
Confidence 4468999995 9999999999998875 8999998754211 000 001 111111 122 24578999
Q ss_pred EEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEE
Q 017290 94 VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138 (374)
Q Consensus 94 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i 138 (374)
||..|+.... ...+..+.+..|....+.++....+.+.+-++
T Consensus 91 vvitag~~~~---~~~~R~dll~~N~~i~~~i~~~i~~~~p~~iv 132 (159)
T d2ldxa1 91 VIITAGARMV---SGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKI 132 (159)
T ss_dssp EEECCSCCCC---TTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEE
T ss_pred EEEecccccC---CCCCHHHHHHHHHHHHHHHHHHHhccCCCeEE
Confidence 9999986432 23345566888999999999888887765333
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.22 E-value=0.0002 Score=57.52 Aligned_cols=104 Identities=15% Similarity=0.195 Sum_probs=66.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc-----------cc-----------ceeEEecccchh
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM-----------FC-----------HEFHLVDLRVMD 82 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~-----------i~~~~~dl~~~~ 82 (374)
+-++|.|+|+ |.+|+.++..++..||+|+++++++........ .+ ..-....+....
T Consensus 3 ~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~ 81 (192)
T d1f0ya2 3 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATST 81 (192)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEES
T ss_pred eeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhccccc
Confidence 4589999995 999999999999999999999998753111000 00 000001122233
Q ss_pred hHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccccc
Q 017290 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146 (374)
Q Consensus 83 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy 146 (374)
++.++++++|.||-+..- |+..=+.++....+.-.+..|+.|+++..
T Consensus 82 d~~~a~~~ad~ViEav~E-----------------~l~~K~~v~~~l~~~~~~~~ilasnTS~l 128 (192)
T d1f0ya2 82 DAASVVHSTDLVVEAIVE-----------------NLKVKNELFKRLDKFAAEHTIFASNTSSL 128 (192)
T ss_dssp CHHHHTTSCSEEEECCCS-----------------CHHHHHHHHHHHTTTSCTTCEEEECCSSS
T ss_pred hhHhhhcccceehhhccc-----------------chhHHHHHHHHHhhhcccCceeeccCccc
Confidence 455677899999999752 44445666666666544566777776543
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.19 E-value=0.0023 Score=48.72 Aligned_cols=108 Identities=17% Similarity=0.118 Sum_probs=70.9
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCccccc----c------cccceeEEecccchhhHhhhccCCCEE
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTE----D------MFCHEFHLVDLRVMDNCLKVTKGVDHV 94 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~----~------~~~i~~~~~dl~~~~~~~~~~~~~d~v 94 (374)
.+||.|+|+ |.+|++++-.|...+ .++..+++++...... . .....+...+ + .+.++++|+|
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~----~~~~~~advv 75 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--T----YDDLAGADVV 75 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--C----GGGGTTCSEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--c----ccccCCCcEE
Confidence 368999995 999999998777766 4888999877532111 0 0011222111 1 2356789999
Q ss_pred EEcccccCCcccc--cCCcceehhhhHHHHHHHHHHHHhCCCCeEEEe
Q 017290 95 FNLAADMGGMGFI--QSNHSVIMYNNTMISFNMLEASRISGVKRFFYA 140 (374)
Q Consensus 95 i~~a~~~~~~~~~--~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~ 140 (374)
|-+++.....+.+ ..+.......|....+.+.+.+++.+.+-++.+
T Consensus 76 vitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aiviv 123 (150)
T d1t2da1 76 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIV 123 (150)
T ss_dssp EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred EEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 9999965432221 123556688899999999999999886654444
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.19 E-value=0.00029 Score=55.23 Aligned_cols=76 Identities=14% Similarity=0.037 Sum_probs=54.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
..+.+|+|.|+ |-+|...++.+...|.+|+++++++.+.......+...+.....+.+..+...+++|++|.+.+.
T Consensus 26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~d~vi~~~~~ 101 (168)
T d1piwa2 26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASS 101 (168)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEeeccchHHHHHhhhcccceEEEEecC
Confidence 35688999986 99999999888888999999999887655444444443322222334445555689999999774
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.17 E-value=0.001 Score=52.62 Aligned_cols=72 Identities=13% Similarity=0.134 Sum_probs=49.9
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccc--------ccccccceeEEecccchhhHhhhccCCCEEEEcc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM--------TEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
|+|.|.| +|..|.+++..|.++|++|++..|..+... .....+......++.-.+++.++++++|+||.+.
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av 79 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV 79 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence 8999999 699999999999999999999998543210 0000111111222334556778889999998877
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
.
T Consensus 80 p 80 (180)
T d1txga2 80 S 80 (180)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.14 E-value=0.00011 Score=58.23 Aligned_cols=74 Identities=15% Similarity=0.073 Sum_probs=53.9
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchh---hHhhhc--cCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD---NCLKVT--KGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~---~~~~~~--~~~d~vi~~a~ 99 (374)
...+|||+||+|-+|..+++.+...|.+|+++++++.+.......+...+ .|..+.+ .+.++- +++|+||++.+
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~v-i~~~~~d~~~~v~~~t~g~g~d~v~d~~g 106 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQV-INYREEDLVERLKEITGGKKVRVVYDSVG 106 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEE-EECCCCCHHHHHHHHhCCCCeEEEEeCcc
Confidence 45799999999999999999998899999999999876544333344332 3554443 333333 26899999987
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=97.11 E-value=0.0005 Score=51.16 Aligned_cols=70 Identities=14% Similarity=0.053 Sum_probs=56.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhc-cCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT-KGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~-~~~d~vi~~a~ 99 (374)
|.|+|+| .|-+|+.+++.|. +++|.+++.++.........++.++.+|.++++.+.++- ++++.+|-+..
T Consensus 1 kHivI~G-~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~ 71 (129)
T d2fy8a1 1 RHVVICG-WSESTLECLRELR--GSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNLE 71 (129)
T ss_dssp CCEEEES-CCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCS
T ss_pred CEEEEEC-CCHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEecc
Confidence 4688998 6899999999984 667888888877655555567899999999999888764 68899987764
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.11 E-value=0.00067 Score=53.15 Aligned_cols=74 Identities=11% Similarity=0.072 Sum_probs=51.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccccccccee-EEecccchhhHhhhc-----cCCCEEEEc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDMFCHEF-HLVDLRVMDNCLKVT-----KGVDHVFNL 97 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~i~~-~~~dl~~~~~~~~~~-----~~~d~vi~~ 97 (374)
...+|+|.|+ |.+|...++.+...|. +|+++++++.+.......+... +..+-.+..+..+.+ .++|+||.+
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~ 104 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIEC 104 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccccccccccccccccccCCCCceEEEec
Confidence 4568999985 9999999999988998 7999998876644333334432 333333433333333 278999999
Q ss_pred cc
Q 017290 98 AA 99 (374)
Q Consensus 98 a~ 99 (374)
.+
T Consensus 105 ~G 106 (171)
T d1pl8a2 105 TG 106 (171)
T ss_dssp SC
T ss_pred cC
Confidence 98
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=97.08 E-value=0.00065 Score=53.56 Aligned_cols=72 Identities=10% Similarity=0.061 Sum_probs=52.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccc--eeEEecccchhhHhhhccCCCEEEEccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCH--EFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i--~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
+.+|.|+| .|.+|..+++.|+++||+|++.+|++++.......+. .... .....+.+.+.+..+|.+|-+..
T Consensus 2 ~~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~-~a~~~~~~~~~~~~~~~ii~~~~ 75 (176)
T d2pgda2 2 QADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVL-GAHSLEEMVSKLKKPRRIILLVK 75 (176)
T ss_dssp CBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCE-ECSSHHHHHHHBCSSCEEEECSC
T ss_pred CCcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcccccccc-chhhhhhhhhhhcccceEEEecC
Confidence 46799999 7999999999999999999999999865433221111 1111 12355667778889999998875
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.04 E-value=0.00029 Score=55.56 Aligned_cols=75 Identities=20% Similarity=0.116 Sum_probs=50.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccch-hhHhhhc--cCCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVM-DNCLKVT--KGVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~-~~~~~~~--~~~d~vi~~a~ 99 (374)
....+|||+||+|-+|...++.+...|.+|+++++++++.......+...+. |..+. ++..... +++|+||++.+
T Consensus 30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~vi-~~~~~~~~~~~~~~~~gvD~vid~vg 107 (176)
T d1xa0a2 30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVL-AREDVMAERIRPLDKQRWAAAVDPVG 107 (176)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEE-ECC---------CCSCCEEEEEECST
T ss_pred CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccceee-ecchhHHHHHHHhhccCcCEEEEcCC
Confidence 3567899999999999999999989999999999987764443333333221 22211 1222222 37999999987
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.01 E-value=0.00036 Score=46.56 Aligned_cols=40 Identities=25% Similarity=0.275 Sum_probs=35.3
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
..+.++|||+||+|-+|...++.+...|++|+++++++++
T Consensus 29 ~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k 68 (77)
T d1o8ca2 29 RPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST 68 (77)
T ss_dssp CGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred ccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence 3466889999999999999999888899999999988654
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.95 E-value=0.00019 Score=55.34 Aligned_cols=65 Identities=22% Similarity=0.209 Sum_probs=47.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-cccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|||.+.| +|-+|+++++.|++.|++|++.+|++++..... ..++.+. .+..++++++|+||-+.-
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~-------~~~~~~~~~~dvIilavk 66 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYA-------MSHQDLIDQVDLVILGIK 66 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBC-------SSHHHHHHTCSEEEECSC
T ss_pred CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeee-------chhhhhhhccceeeeecc
Confidence 7899998 899999999999999999999999865433321 1122221 234556678999997764
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=96.95 E-value=0.00024 Score=56.84 Aligned_cols=74 Identities=11% Similarity=0.086 Sum_probs=50.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc--------cccceeEEecccchhhHhhhccCCCEEE
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED--------MFCHEFHLVDLRVMDNCLKVTKGVDHVF 95 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~i~~~~~dl~~~~~~~~~~~~~d~vi 95 (374)
+.|+||.|.| +|..|.+++..|.++||+|++.+|++....... .+++. ..-++.-..++.++++++|+||
T Consensus 5 ~~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~-l~~~i~~t~~l~~a~~~ad~ii 82 (189)
T d1n1ea2 5 LYLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQ-LASNITFTSDVEKAYNGAEIIL 82 (189)
T ss_dssp CCEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCB-CCTTEEEESCHHHHHTTCSCEE
T ss_pred ceeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccc-cccccccchhhhhccCCCCEEE
Confidence 3567899999 799999999999999999999998764211110 00111 1122333345777888999998
Q ss_pred Eccc
Q 017290 96 NLAA 99 (374)
Q Consensus 96 ~~a~ 99 (374)
.+..
T Consensus 83 iavP 86 (189)
T d1n1ea2 83 FVIP 86 (189)
T ss_dssp ECSC
T ss_pred EcCc
Confidence 8764
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.90 E-value=0.0042 Score=46.52 Aligned_cols=87 Identities=15% Similarity=0.197 Sum_probs=60.7
Q ss_pred CCCeEEEEcCc---chhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 25 EKLRISVTGAG---GFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 25 ~~~~ilItGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
+.++|.|+|++ +..|..+++.|++.||+|+.+..+..... + ..-...+.++-..+|.++-+..
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~-----G-------~~~~~sl~dlp~~iD~v~i~vp-- 83 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVL-----G-------RKCYPSVLDIPDKIEVVDLFVK-- 83 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEET-----T-------EECBSSGGGCSSCCSEEEECSC--
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccC-----C-------CcccccccccCccceEEEEEeC--
Confidence 45889999998 89999999999999999988875432111 1 1122334445557898888764
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
......+++.|.+.|++.+++.++
T Consensus 84 -----------------~~~~~~~~~e~~~~g~k~v~~~~G 107 (139)
T d2d59a1 84 -----------------PKLTMEYVEQAIKKGAKVVWFQYN 107 (139)
T ss_dssp -----------------HHHHHHHHHHHHHHTCSEEEECTT
T ss_pred -----------------HHHHHHHHHHHHHhCCCEEEEecc
Confidence 234567888888889976665433
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=96.86 E-value=0.00044 Score=54.88 Aligned_cols=74 Identities=16% Similarity=0.258 Sum_probs=49.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccccccceeEEecccc--hhh----Hhhhc--cCCCEEE
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDMFCHEFHLVDLRV--MDN----CLKVT--KGVDHVF 95 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~i~~~~~dl~~--~~~----~~~~~--~~~d~vi 95 (374)
.+.+|||+|+ |-+|...++.+...|. +|+++++++.+.......+...+ .|..+ ..+ +.+.. +++|+||
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~~i~~~~~~~g~Dvvi 105 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLT-LNRRETSVEERRKAIMDITHGRGADFIL 105 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHHHHTTTSCEEEEE
T ss_pred CCCEEEEECC-CccchhheecccccccccccccccccccccccccccceEE-EeccccchHHHHHHHHHhhCCCCceEEe
Confidence 4688999996 8999999999988997 89999998775433333333222 22222 111 22322 2689999
Q ss_pred Ecccc
Q 017290 96 NLAAD 100 (374)
Q Consensus 96 ~~a~~ 100 (374)
.+.+.
T Consensus 106 d~vG~ 110 (182)
T d1vj0a2 106 EATGD 110 (182)
T ss_dssp ECSSC
T ss_pred ecCCc
Confidence 99973
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.85 E-value=0.0064 Score=43.92 Aligned_cols=82 Identities=17% Similarity=0.313 Sum_probs=57.7
Q ss_pred CeEEEEcCc---chhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCC
Q 017290 27 LRISVTGAG---GFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGG 103 (374)
Q Consensus 27 ~~ilItGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~ 103 (374)
|+|.|+|++ +..|..+++.|++.||+|+.+..+.... ..+.-...+.++-..+|.++-+..
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i------------~G~~~y~sl~~lp~~~D~vvi~vp---- 65 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI------------EGLKCYRSVRELPKDVDVIVFVVP---- 65 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------------TTEECBSSGGGSCTTCCEEEECSC----
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccc------------cCccccccchhccccceEEEEEeC----
Confidence 689999988 8899999999999999998886443221 112222334445557898887764
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEE
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFY 139 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~ 139 (374)
-..+..+++.|.+.|++.+++
T Consensus 66 ---------------~~~~~~~l~~~~~~g~k~v~~ 86 (116)
T d1y81a1 66 ---------------PKVGLQVAKEAVEAGFKKLWF 86 (116)
T ss_dssp ---------------HHHHHHHHHHHHHTTCCEEEE
T ss_pred ---------------HHHHHHHHHHHHhcCCceEEe
Confidence 233567788888999976654
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=96.85 E-value=0.0029 Score=49.34 Aligned_cols=83 Identities=8% Similarity=0.095 Sum_probs=52.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhC-CCEEEEE-eCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSE-GHYIIAS-DWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
+.+||.|.| +|.+|+.+++.|.+. +.+++++ ++++...... ... ...++....+++|+|+.+.....
T Consensus 2 ~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~~~-----~~~-----~~~~~~~~~~~~D~Vvi~tp~~~ 70 (170)
T d1f06a1 2 TNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTKT-----PVF-----DVADVDKHADDVDVLFLCMGSAT 70 (170)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSSS-----CEE-----EGGGGGGTTTTCSEEEECSCTTT
T ss_pred CcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccccccc-----ccc-----cchhhhhhccccceEEEeCCCcc
Confidence 457899998 799999999999886 6777655 4443322111 111 12234445678999998876421
Q ss_pred CcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEE
Q 017290 103 GMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i 138 (374)
...++..+.++|+ ++|
T Consensus 71 -------------------h~~~a~~aL~aG~-~vv 86 (170)
T d1f06a1 71 -------------------DIPEQAPKFAQFA-CTV 86 (170)
T ss_dssp -------------------HHHHHHHHHTTTS-EEE
T ss_pred -------------------cHHHHHHHHHCCC-cEE
Confidence 2345666777775 555
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=96.84 E-value=0.00087 Score=52.30 Aligned_cols=75 Identities=16% Similarity=0.176 Sum_probs=55.4
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
....+|+|.|+ |-+|...++.+...|.+++++++++++.......+... ..|..+.+......+++|++|.+.+.
T Consensus 29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~-~i~~~~~~~~~~~~~~~D~vid~~g~ 103 (168)
T d1uufa2 29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADE-VVNSRNADEMAAHLKSFDFILNTVAA 103 (168)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSE-EEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCCcE-EEECchhhHHHHhcCCCceeeeeeec
Confidence 35688999985 88999999999889999999998876543333334333 24555666666666789999999873
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=96.83 E-value=0.00098 Score=44.32 Aligned_cols=52 Identities=8% Similarity=0.063 Sum_probs=39.4
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRV 80 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~ 80 (374)
||+|.|.| +|++|+.++....+-|++|++++-.++...... ...++..+..+
T Consensus 1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~pa~~~--a~dvIT~e~E~ 52 (78)
T d3etja2 1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPF--QQSVITAEIER 52 (78)
T ss_dssp CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCGGGSCG--GGSEEEESSSC
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCCccccc--ccceEEEeecc
Confidence 57899999 799999999999999999999997765433222 23555555554
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.78 E-value=0.00045 Score=54.52 Aligned_cols=74 Identities=16% Similarity=0.101 Sum_probs=50.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-CCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-GVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-~~d~vi~~a~ 99 (374)
....|||+||+|-+|+..++.+...|.+|+++++++.+.......+...+ .|..+.+..+.+.+ ..|.+|++.+
T Consensus 31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~v-i~~~~~~~~~~l~~~~~~~vvD~Vg 105 (177)
T d1o89a2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRV-LPRDEFAESRPLEKQVWAGAIDTVG 105 (177)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEE-EEGGGSSSCCSSCCCCEEEEEESSC
T ss_pred CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhccccc-cccccHHHHHHHHhhcCCeeEEEcc
Confidence 34589999999999999999998899999999998776544433343332 23333332222222 4688888876
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.78 E-value=0.0054 Score=45.54 Aligned_cols=71 Identities=17% Similarity=0.213 Sum_probs=49.5
Q ss_pred eEEEEcCcchhHHHHHHHHHhC-CCEEEEE-eCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccCCcc
Q 017290 28 RISVTGAGGFIASHIARRLKSE-GHYIIAS-DWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMG 105 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~~~ 105 (374)
||.|+|++|.+|+.+++.+.+. ++++.+. ++... ...+ ...++|+||.+..+.
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-------------------~~~~--~~~~~DvvIDFS~p~---- 55 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-------------------LSLL--TDGNTEVVIDFTHPD---- 55 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-------------------THHH--HTTTCSEEEECCCTT----
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-------------------hhhh--ccccCCEEEEcccHH----
Confidence 7999999999999999998775 6776653 32210 0111 124789999998642
Q ss_pred cccCCcceehhhhHHHHHHHHHHHHhCCCCeEEE
Q 017290 106 FIQSNHSVIMYNNTMISFNMLEASRISGVKRFFY 139 (374)
Q Consensus 106 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~ 139 (374)
.+...++.|.+.++ .+|.
T Consensus 56 ---------------~~~~~~~~~~~~~~-~~Vi 73 (135)
T d1yl7a1 56 ---------------VVMGNLEFLIDNGI-HAVV 73 (135)
T ss_dssp ---------------THHHHHHHHHHTTC-EEEE
T ss_pred ---------------HHHHHHHHHHhcCC-CEEE
Confidence 24678889999997 4543
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=96.78 E-value=0.00054 Score=52.62 Aligned_cols=64 Identities=16% Similarity=0.149 Sum_probs=45.0
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcccccccc-cceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDMF-CHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|||.+.| +|.+|+++++.|++.| ++|++.+|++++....... ++.+. .| .+ .++++|+||.+.-
T Consensus 1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~---~~----~v~~~Div~lavk 66 (152)
T d1yqga2 1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-AT---LP----ELHSDDVLILAVK 66 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SS---CC----CCCTTSEEEECSC
T ss_pred CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-cc---cc----cccccceEEEecC
Confidence 7899998 6999999999999887 9999999997654333221 23221 11 11 2457899997753
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.77 E-value=0.0003 Score=54.97 Aligned_cols=74 Identities=15% Similarity=0.064 Sum_probs=50.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccc--hhhHhhhc-cCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRV--MDNCLKVT-KGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~--~~~~~~~~-~~~d~vi~~a~ 99 (374)
....|||+||+|-+|...++.....|.+|+++++++++.......+...+. |..+ .+.+...- +++|+||++.+
T Consensus 23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi-~~~~~~~~~~~~~~~~gvd~vid~vg 99 (167)
T d1tt7a2 23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVI-SREDVYDGTLKALSKQQWQGAVDPVG 99 (167)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEE-EHHHHCSSCCCSSCCCCEEEEEESCC
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccceE-eccchhchhhhcccCCCceEEEecCc
Confidence 345699999999999999998888899999999988765544444444332 2221 11111111 37899999987
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=96.72 E-value=0.0007 Score=53.87 Aligned_cols=99 Identities=17% Similarity=0.086 Sum_probs=63.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc-----------------c----cceeEEecccchhh
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM-----------------F----CHEFHLVDLRVMDN 83 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------------~----~i~~~~~dl~~~~~ 83 (374)
+-++|.|+|+ |.+|+.++..++..|++|++++++++....... . -..-+... ++
T Consensus 3 ~I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~-~~--- 77 (186)
T d1wdka3 3 DVKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPT-LS--- 77 (186)
T ss_dssp CCSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEE-SS---
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeecc-cc---
Confidence 3478999995 999999999999999999999998653111000 0 00000010 00
Q ss_pred HhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeeccccc
Q 017290 84 CLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146 (374)
Q Consensus 84 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy 146 (374)
.+.+.++|.||-+..- |+..-+.++....+.-.+..|+.|+++.+
T Consensus 78 -~~~~~~adlViEav~E-----------------~l~~K~~lf~~l~~~~~~~~IiaSnTS~l 122 (186)
T d1wdka3 78 -YGDFGNVDLVVEAVVE-----------------NPKVKQAVLAEVENHVREDAILASNTSTI 122 (186)
T ss_dssp -STTGGGCSEEEECCCS-----------------CHHHHHHHHHHHHTTSCTTCEEEECCSSS
T ss_pred -cccccccceeeeeecc-----------------hHHHHHHHHHHHHhhcCCCeeEEeccccc
Confidence 1234578999987752 55556677777777665566777776554
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=96.72 E-value=0.002 Score=50.89 Aligned_cols=77 Identities=14% Similarity=0.020 Sum_probs=58.7
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc--------ccccceeEEecccchhhHhhhccCCCE
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE--------DMFCHEFHLVDLRVMDNCLKVTKGVDH 93 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--------~~~~i~~~~~dl~~~~~~~~~~~~~d~ 93 (374)
+.+.++|+|.|+ |-.|++++..|.+.|. +++++.|++++.... ..........++.+.+.+...+..+|+
T Consensus 15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di 93 (182)
T d1vi2a1 15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI 93 (182)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccce
Confidence 457799999995 7889999999999985 889999987643211 111234556788888888888889999
Q ss_pred EEEcccc
Q 017290 94 VFNLAAD 100 (374)
Q Consensus 94 vi~~a~~ 100 (374)
||++...
T Consensus 94 iIN~Tp~ 100 (182)
T d1vi2a1 94 LTNGTKV 100 (182)
T ss_dssp EEECSST
T ss_pred eccccCC
Confidence 9999864
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.65 E-value=0.0005 Score=54.15 Aligned_cols=74 Identities=19% Similarity=0.197 Sum_probs=50.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccccccceeEEecccc---hhhHhhhcc--CCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDMFCHEFHLVDLRV---MDNCLKVTK--GVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~i~~~~~dl~~---~~~~~~~~~--~~d~vi~~a 98 (374)
...+|+|.|+ |-+|...++.+...|. +|+++++++.+.......+... ..|..+ .+.+.+... ++|+||.++
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~-~i~~~~~~~~~~v~~~t~g~G~D~vid~~ 104 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATD-ILNYKNGHIEDQVMKLTNGKGVDRVIMAG 104 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSE-EECGGGSCHHHHHHHHTTTSCEEEEEECS
T ss_pred CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCccc-cccccchhHHHHHHHHhhccCcceEEEcc
Confidence 4578999985 9999999999988896 7999998876544333333322 233333 233444443 699999999
Q ss_pred cc
Q 017290 99 AD 100 (374)
Q Consensus 99 ~~ 100 (374)
+.
T Consensus 105 g~ 106 (174)
T d1jqba2 105 GG 106 (174)
T ss_dssp SC
T ss_pred CC
Confidence 84
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=96.59 E-value=0.0067 Score=41.43 Aligned_cols=68 Identities=21% Similarity=0.189 Sum_probs=47.7
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-cccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-EDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
|||.++|-.|-==+.|++.|+++|+.|.+.++..+.... +...++++..+. +.+ .++++|.||...+.
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh--~~~----~i~~~d~vV~SsAI 70 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPH--SAD----NWYDPDLVIKTPAV 70 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSC--CTT----SCCCCSEEEECTTC
T ss_pred cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeee--ccc----ccCCCCEEEEecCc
Confidence 789998865554457899999999999999988654322 334466665542 222 24678999998885
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=96.46 E-value=0.0029 Score=49.70 Aligned_cols=71 Identities=11% Similarity=0.098 Sum_probs=47.1
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccccc-----ceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFC-----HEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-----i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|||.|+| .|.+|..+++.|+++||+|++.+|++++.......+ ...... ..+.+.+...+..++.++-+..
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 77 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKA-FETMEAFAASLKKPRKALILVQ 77 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEE-CSCHHHHHHHBCSSCEEEECCC
T ss_pred CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhh-hhhhhHHHHhcccceEEEEeec
Confidence 7899998 999999999999999999999999876533221110 011111 2234455555666676666654
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.41 E-value=0.0013 Score=51.41 Aligned_cols=76 Identities=21% Similarity=0.298 Sum_probs=51.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcccccccccceeEEecccchhhHhhhc-----cCCCEEEEc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT-----KGVDHVFNL 97 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~-----~~~d~vi~~ 97 (374)
....+|+|+|++|-+|...++.+...| .+|+++++++.+.......+...+ .|..+.+..++.. +++|+||.|
T Consensus 26 ~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~-i~~~~~~~~~~~~~~~~~~~~d~vid~ 104 (170)
T d1jvba2 26 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYV-INASMQDPLAEIRRITESKGVDAVIDL 104 (170)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCcee-eccCCcCHHHHHHHHhhcccchhhhcc
Confidence 355789999999999999999998888 489999988765443333343322 2333333333332 268999999
Q ss_pred ccc
Q 017290 98 AAD 100 (374)
Q Consensus 98 a~~ 100 (374)
++.
T Consensus 105 ~g~ 107 (170)
T d1jvba2 105 NNS 107 (170)
T ss_dssp CCC
T ss_pred ccc
Confidence 973
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=96.37 E-value=0.013 Score=40.58 Aligned_cols=70 Identities=23% Similarity=0.130 Sum_probs=48.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-cccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-EDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
..++|.+.|-.|--=+.|++.|.++||+|.+.++..+.... ....++.+..++-. + .++++|.||...+.
T Consensus 7 ~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~--~----~i~~~d~vV~S~AI 77 (96)
T d1p3da1 7 RVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAE--E----HIEGASVVVVSSAI 77 (96)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCG--G----GGTTCSEEEECTTS
T ss_pred hCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCcc--c----cCCCCCEEEECCCc
Confidence 56889998844433377899999999999999988654322 23346666554432 2 24578999888875
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=96.31 E-value=0.0056 Score=48.10 Aligned_cols=63 Identities=11% Similarity=0.067 Sum_probs=49.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
..+++|.|.| .|-||+.+++.|..-|.+|++.+|.+..... . -.+.+.++++.+|+|+.+...
T Consensus 40 l~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~------~-------~~~~l~ell~~sDiv~~~~pl 102 (181)
T d1qp8a1 40 IQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEGPW------R-------FTNSLEEALREARAAVCALPL 102 (181)
T ss_dssp CTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCSSS------C-------CBSCSHHHHTTCSEEEECCCC
T ss_pred ccCceEEEec-cccccccceeeeeccccccccccccccccce------e-------eeechhhhhhccchhhccccc
Confidence 4679999999 8999999999999999999999987653221 1 112467788999999987764
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.31 E-value=0.0013 Score=51.59 Aligned_cols=75 Identities=17% Similarity=0.188 Sum_probs=47.7
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCE-EEEEeCCCCcccccccccceeEEecccchhhHh---hhcc-CCCEEEEc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL---KVTK-GVDHVFNL 97 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~---~~~~-~~d~vi~~ 97 (374)
.....+|+|.|+ |.+|...++.+...|.. |+++++++.+.......+... ..|..+.+..+ ++.. ++|+||.|
T Consensus 26 ~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~-~i~~~~~~~~~~i~~~t~gg~D~vid~ 103 (174)
T d1f8fa2 26 VTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATH-VINSKTQDPVAAIKEITDGGVNFALES 103 (174)
T ss_dssp CCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTSCEEEEEEC
T ss_pred CCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeE-EEeCCCcCHHHHHHHHcCCCCcEEEEc
Confidence 345678999986 99999999988888875 556666665433333333322 23343433222 3322 69999999
Q ss_pred cc
Q 017290 98 AA 99 (374)
Q Consensus 98 a~ 99 (374)
.+
T Consensus 104 ~G 105 (174)
T d1f8fa2 104 TG 105 (174)
T ss_dssp SC
T ss_pred CC
Confidence 98
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.29 E-value=0.0052 Score=48.02 Aligned_cols=76 Identities=18% Similarity=0.124 Sum_probs=50.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccccccceeEEecccch---hhHhhhc--cCCCEEEEc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDMFCHEFHLVDLRVM---DNCLKVT--KGVDHVFNL 97 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~---~~~~~~~--~~~d~vi~~ 97 (374)
..+.+|+|+| .|-||...++.+...|. .|++.++++.+.......+...+.-..... ..+.... .++|++|.|
T Consensus 27 ~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~ 105 (174)
T d1e3ia2 27 TPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDC 105 (174)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred CCCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEe
Confidence 3567899997 69999999999999997 688888887664433334443332211111 1222222 389999999
Q ss_pred ccc
Q 017290 98 AAD 100 (374)
Q Consensus 98 a~~ 100 (374)
++.
T Consensus 106 ~G~ 108 (174)
T d1e3ia2 106 AGT 108 (174)
T ss_dssp SCC
T ss_pred ccc
Confidence 983
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.24 E-value=0.00091 Score=53.22 Aligned_cols=74 Identities=15% Similarity=0.143 Sum_probs=45.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCE-EEEEeCCCCcccccc-cccceeEEecccchh---hHhhhc-cCCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHMTED-MFCHEFHLVDLRVMD---NCLKVT-KGVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~-~~~i~~~~~dl~~~~---~~~~~~-~~~d~vi~~a 98 (374)
....|||+||+|-+|+..++.+...|.+ |+++++++++..... ..+.. ...|..+.+ .+.++. +++|+||++.
T Consensus 30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad-~vi~~~~~~~~~~~~~~~~~GvDvv~D~v 108 (187)
T d1vj1a2 30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD-AAVNYKTGNVAEQLREACPGGVDVYFDNV 108 (187)
T ss_dssp SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS-EEEETTSSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce-EEeeccchhHHHHHHHHhccCceEEEecC
Confidence 3478999999999999999998888975 444555543322111 11222 233443322 233322 3799999999
Q ss_pred c
Q 017290 99 A 99 (374)
Q Consensus 99 ~ 99 (374)
+
T Consensus 109 G 109 (187)
T d1vj1a2 109 G 109 (187)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.20 E-value=0.0019 Score=51.59 Aligned_cols=34 Identities=21% Similarity=0.370 Sum_probs=29.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
|||.|.| .||+|..++..| +.||+|++++-+++.
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~ 34 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSK 34 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHH
T ss_pred CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHH
Confidence 7899997 899999999755 679999999987653
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=96.14 E-value=0.015 Score=42.48 Aligned_cols=95 Identities=11% Similarity=0.027 Sum_probs=59.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHh-CCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-CCCEEEEcccccCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKS-EGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-GVDHVFNLAADMGG 103 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-~~d~vi~~a~~~~~ 103 (374)
..+|+|.| +|.+|+.+++.+.. .+|++.++.-.........-.++.++. .+.+.+..+ .+++.+-+..
T Consensus 3 ~~~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~I~Gi~V~~-----~~~l~~~~~~~i~iai~~i~---- 72 (126)
T d2dt5a2 3 KWGLCIVG-MGRLGSALADYPGFGESFELRGFFDVDPEKVGRPVRGGVIEH-----VDLLPQRVPGRIEIALLTVP---- 72 (126)
T ss_dssp CEEEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEETTEEEEE-----GGGHHHHSTTTCCEEEECSC----
T ss_pred CceEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCEECCEEEec-----HHHHHHHHhhcccEEEEeCC----
Confidence 35899999 79999999998764 478877664433332223333555542 234555443 5565555543
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccc
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~v 145 (374)
-...+.+++.|.+.|++.+..++....
T Consensus 73 ---------------~~~~~~I~d~l~~~gIk~I~~f~~~~l 99 (126)
T d2dt5a2 73 ---------------REAAQKAADLLVAAGIKGILNFAPVVL 99 (126)
T ss_dssp ---------------HHHHHHHHHHHHHHTCCEEEECSSSCC
T ss_pred ---------------HHHHHHHHHHHHHcCCCEEeecCceee
Confidence 123467888899999987887766443
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.06 E-value=0.0056 Score=47.88 Aligned_cols=32 Identities=16% Similarity=0.277 Sum_probs=27.2
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSE-GHYIIASDW 58 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r 58 (374)
|-||.|.| .|.||+.+++.|.++ +.+|.++..
T Consensus 1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd 33 (178)
T d1b7go1 1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAK 33 (178)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEC
T ss_pred CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEEC
Confidence 56899998 899999999999987 468887754
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.04 E-value=0.0028 Score=48.70 Aligned_cols=77 Identities=10% Similarity=0.052 Sum_probs=58.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
.+-+|+|.| .|..|..-++.+..-|.+|++++.+..............+..-..+.+.+.+.++++|+||-++-..+
T Consensus 31 ~pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG 107 (168)
T d1pjca1 31 KPGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPG 107 (168)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTT
T ss_pred CCcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCC
Confidence 568999999 79999999999999999999999987654332221112223334566788888999999999998543
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=96.00 E-value=0.0073 Score=48.21 Aligned_cols=67 Identities=16% Similarity=0.012 Sum_probs=50.0
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
.....++|.|.| .|-||+.+++.|..-|.+|++.++........ .+ ....+.++++.+|+|+.+...
T Consensus 41 ~~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~---~~--------~~~~l~~l~~~~D~v~~~~pl 107 (199)
T d1dxya1 41 KELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDHP---DF--------DYVSLEDLFKQSDVIDLHVPG 107 (199)
T ss_dssp CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCCT---TC--------EECCHHHHHHHCSEEEECCCC
T ss_pred ccccceeeeeee-cccccccccccccccceeeeccCCccchhhhc---ch--------hHHHHHHHHHhcccceeeecc
Confidence 445679999999 89999999999998999999999875542211 11 122466677889988887764
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=95.96 E-value=0.0074 Score=46.16 Aligned_cols=71 Identities=15% Similarity=0.269 Sum_probs=40.5
Q ss_pred CCCeEEEEcCcchhHHHH-HHHHHhC-CCEEEEE-eCCCCccc--ccccccceeEEecccchhhHhhhc--cCCCEEEEc
Q 017290 25 EKLRISVTGAGGFIASHI-ARRLKSE-GHYIIAS-DWKKNEHM--TEDMFCHEFHLVDLRVMDNCLKVT--KGVDHVFNL 97 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l-~~~L~~~-g~~V~~~-~r~~~~~~--~~~~~~i~~~~~dl~~~~~~~~~~--~~~d~vi~~ 97 (374)
+++||.|+| +|.+|+.+ .+.|... ..++.++ +|++.... .....++.+...+ .+.+.+.. .++|+||.+
T Consensus 3 kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~~---~d~l~~~~~~~~iDiVf~A 78 (157)
T d1nvmb1 3 QKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAG---VEGLIKLPEFADIDFVFDA 78 (157)
T ss_dssp SCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSH---HHHHHHSGGGGGEEEEEEC
T ss_pred CCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccccc---eeeeeecccccccCEEEEc
Confidence 457999999 99999865 4555444 3577666 45543211 1122234443332 23343332 478999887
Q ss_pred cc
Q 017290 98 AA 99 (374)
Q Consensus 98 a~ 99 (374)
..
T Consensus 79 Tp 80 (157)
T d1nvmb1 79 TS 80 (157)
T ss_dssp SC
T ss_pred CC
Confidence 54
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.91 E-value=0.0076 Score=43.52 Aligned_cols=37 Identities=16% Similarity=0.237 Sum_probs=33.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
.+++++|.| .|++|-+++..|.+.|.+|+++.|.+.-
T Consensus 21 ~p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~i 57 (117)
T d1ebda2 21 VPKSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGEI 57 (117)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred cCCeEEEEC-CCccceeeeeeecccccEEEEEEeccee
Confidence 458999999 7999999999999999999999988653
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=95.87 E-value=0.0075 Score=43.90 Aligned_cols=37 Identities=19% Similarity=0.331 Sum_probs=33.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
..++|+|.| +|++|-+++..|.+.|.+|+++.+.+..
T Consensus 29 ~~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~~ 65 (121)
T d1d7ya2 29 PQSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPRL 65 (121)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred cCCeEEEEC-cchhHHHHHHHhhcccceEEEEeecccc
Confidence 358999998 7999999999999999999999988653
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=95.81 E-value=0.0041 Score=48.37 Aligned_cols=73 Identities=12% Similarity=0.124 Sum_probs=48.1
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccc---cceeEEecccchhhHhhhccCCCEEEEcc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMF---CHEFHLVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~i~~~~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
....+++|||.| +|-.+++++-.|.+.|.+|+++.|+.++....... ...+...+..+. ....+|+||++.
T Consensus 14 ~~~~~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~-----~~~~~dliIN~T 87 (170)
T d1nyta1 14 FIRPGLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDEL-----EGHEFDLIINAT 87 (170)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGG-----TTCCCSEEEECC
T ss_pred CCCCCCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccc-----cccccceeeccc
Confidence 345679999999 57789999999999999999999987643221110 011112222211 124789999997
Q ss_pred cc
Q 017290 99 AD 100 (374)
Q Consensus 99 ~~ 100 (374)
..
T Consensus 88 p~ 89 (170)
T d1nyta1 88 SS 89 (170)
T ss_dssp SC
T ss_pred cc
Confidence 64
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.76 E-value=0.0056 Score=47.27 Aligned_cols=74 Identities=14% Similarity=0.089 Sum_probs=49.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccc--hhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRV--MDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~--~~~~~~~~~~~d~vi~~a~ 99 (374)
...+|+|.| +|-+|...++.+...|++|+++++++++.......+...+.....+ .+.+.+..++.+.+|.+++
T Consensus 27 ~g~~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 102 (168)
T d1rjwa2 27 PGEWVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAV 102 (168)
T ss_dssp TTCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CCCEEEEee-cccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceecccccchhhhhcccccCCCceEEeecC
Confidence 457899987 5889999999998899999999988776544444444444332211 2234444456777777765
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=95.76 E-value=0.0097 Score=46.37 Aligned_cols=77 Identities=17% Similarity=0.140 Sum_probs=50.1
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcccccccccceeEEecccchhhHh---hhc--cCCCEEEE
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL---KVT--KGVDHVFN 96 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~---~~~--~~~d~vi~ 96 (374)
.....+|+|.|+ |-+|...+..+...| ..|+++++++++.......+.......-+..+.+. +.. .++|++|.
T Consensus 26 vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid 104 (176)
T d2jhfa2 26 VTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFE 104 (176)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEe
Confidence 345678999998 558999998898887 58999999887655443333333222212112222 222 37999999
Q ss_pred cccc
Q 017290 97 LAAD 100 (374)
Q Consensus 97 ~a~~ 100 (374)
+.+.
T Consensus 105 ~~G~ 108 (176)
T d2jhfa2 105 VIGR 108 (176)
T ss_dssp CSCC
T ss_pred cCCc
Confidence 9983
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.76 E-value=0.0092 Score=43.47 Aligned_cols=37 Identities=16% Similarity=0.350 Sum_probs=33.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
.+++++|+| +|+||-+++..|.+.|.+|+++.+.+.-
T Consensus 22 ~p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~~ 58 (122)
T d1v59a2 22 IPKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQI 58 (122)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEEC-CCchHHHHHHHHHhhCcceeEEEecccc
Confidence 458999999 7999999999999999999999988754
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=95.75 E-value=0.004 Score=49.64 Aligned_cols=67 Identities=18% Similarity=0.188 Sum_probs=50.0
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
...+++|.|.| .|.||+.+++.|..-|.+|++.++..+...... ....+.+.++++.+|+|+.+...
T Consensus 40 el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~----------~~~~~~l~~~l~~sDii~~~~pl 106 (197)
T d1j4aa1 40 EVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEKK----------GYYVDSLDDLYKQADVISLHVPD 106 (197)
T ss_dssp CGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHT----------TCBCSCHHHHHHHCSEEEECSCC
T ss_pred cccCCeEEEec-ccccchhHHHhHhhhcccccccCcccccccccc----------eeeeccccccccccccccccCCc
Confidence 34679999999 999999999999888999999987654321111 11234567788889988888764
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.74 E-value=0.012 Score=45.94 Aligned_cols=76 Identities=17% Similarity=0.114 Sum_probs=52.2
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcccccccccceeEEecccch----hhHhhhc--cCCCEEE
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDMFCHEFHLVDLRVM----DNCLKVT--KGVDHVF 95 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~----~~~~~~~--~~~d~vi 95 (374)
......|+|+| .|-+|...++.+...| .+|+++++++++.......+...+. |..+. +.+.+.. .++|++|
T Consensus 27 ~~~g~tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~i-n~~~~~~~~~~~~~~~~g~G~d~vi 104 (176)
T d1d1ta2 27 VKPGSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECI-SPKDSTKPISEVLSEMTGNNVGYTF 104 (176)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEE-CGGGCSSCHHHHHHHHHTSCCCEEE
T ss_pred CCCCCEEEEEC-CCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEE-CccccchHHHHHHHHhccccceEEE
Confidence 34567899998 5999999999999998 5899999998765544444443332 22222 2222322 3899999
Q ss_pred Ecccc
Q 017290 96 NLAAD 100 (374)
Q Consensus 96 ~~a~~ 100 (374)
.+.+.
T Consensus 105 ~~~g~ 109 (176)
T d1d1ta2 105 EVIGH 109 (176)
T ss_dssp ECSCC
T ss_pred EeCCc
Confidence 99984
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=95.73 E-value=0.0092 Score=47.32 Aligned_cols=71 Identities=14% Similarity=0.060 Sum_probs=51.5
Q ss_pred CCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 21 YWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 21 ~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
.....+++|.|+| .|-||+.+++.|..-|.+|++.++......... .++...+.+.++++.+|+|+.+...
T Consensus 44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~--------~~~~~~~~l~~ll~~sD~i~~~~pl 114 (193)
T d1mx3a1 44 AARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERA--------LGLQRVSTLQDLLFHSDCVTLHCGL 114 (193)
T ss_dssp CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH--------HTCEECSSHHHHHHHCSEEEECCCC
T ss_pred ceeeeCceEEEec-cccccccceeeeeccccceeeccCcccccchhh--------hccccccchhhccccCCEEEEeecc
Confidence 3445789999998 899999999999888999999998755322111 1122234567778889988877764
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=95.71 E-value=0.01 Score=43.32 Aligned_cols=37 Identities=22% Similarity=0.334 Sum_probs=32.9
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
...++|+|.| .|++|.+++..|.+.|.+|+++.+.+.
T Consensus 28 ~~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~ 64 (123)
T d1nhpa2 28 PEVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDR 64 (123)
T ss_dssp TTCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cCCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCc
Confidence 3568999998 799999999999999999999988764
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=95.67 E-value=0.016 Score=44.96 Aligned_cols=76 Identities=17% Similarity=0.100 Sum_probs=50.8
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccccccceeEEecccchh----hHhhhc--cCCCEEE
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDMFCHEFHLVDLRVMD----NCLKVT--KGVDHVF 95 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~----~~~~~~--~~~d~vi 95 (374)
.....+|+|.|+ |-+|...++.+...|. +|+++++++++.......+.+.+ .|..+.+ ...... .+.|++|
T Consensus 25 ~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~-i~~~~~d~~~~~~~~~~~~~G~d~vi 102 (174)
T d1p0fa2 25 VTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATEC-LNPKDYDKPIYEVICEKTNGGVDYAV 102 (174)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEE-EcCCCchhHHHHHHHHhcCCCCcEEE
Confidence 345678999985 9999999999988885 79999988776544443443332 2222212 222222 3799999
Q ss_pred Ecccc
Q 017290 96 NLAAD 100 (374)
Q Consensus 96 ~~a~~ 100 (374)
.+.+.
T Consensus 103 d~~g~ 107 (174)
T d1p0fa2 103 ECAGR 107 (174)
T ss_dssp ECSCC
T ss_pred EcCCC
Confidence 99983
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=95.66 E-value=0.021 Score=41.39 Aligned_cols=74 Identities=18% Similarity=0.254 Sum_probs=56.4
Q ss_pred CCCeEEEEcCc----------chhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCC
Q 017290 25 EKLRISVTGAG----------GFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVD 92 (374)
Q Consensus 25 ~~~~ilItGat----------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d 92 (374)
..+||||.|+. -|.+.+.++.|.+.|++++.+.-++......... ..-++.+..+.+.+.++++ ++|
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~-aD~lYfePlt~e~v~~Ii~~E~pd 84 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM-ADATYIEPIHWEVVRKIIEKERPD 84 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG-SSEEECSCCCHHHHHHHHHHHCCS
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh-cceeeeecCCHHHHHHHHHHhCcC
Confidence 56899999974 3889999999999999999999998875543221 1334566667778888885 899
Q ss_pred EEEEccc
Q 017290 93 HVFNLAA 99 (374)
Q Consensus 93 ~vi~~a~ 99 (374)
.|+-..|
T Consensus 85 ~il~~~G 91 (127)
T d1a9xa3 85 AVLPTMG 91 (127)
T ss_dssp EEECSSS
T ss_pred CeEEEee
Confidence 8886655
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=95.64 E-value=0.033 Score=39.84 Aligned_cols=74 Identities=15% Similarity=0.217 Sum_probs=54.7
Q ss_pred CCCeEEEEcCcc----------hhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCC
Q 017290 25 EKLRISVTGAGG----------FIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVD 92 (374)
Q Consensus 25 ~~~~ilItGatG----------~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d 92 (374)
..++|||.|+.. |.+.+.++.|.+.|++++.+.-++......... ..-++.+....+.+.++++ ++|
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~-aD~lYfeplt~e~v~~Ii~~E~p~ 81 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDT-SDRLYFEPVTLEDVLEIVRIEKPK 81 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTS-SSEEECCCCSHHHHHHHHHHHCCS
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhh-cCceEEccCCHHHHHHHHHHhCCC
Confidence 458999999743 889999999999999999999998876543222 1334555556777777774 888
Q ss_pred EEEEccc
Q 017290 93 HVFNLAA 99 (374)
Q Consensus 93 ~vi~~a~ 99 (374)
.||-..|
T Consensus 82 ~ii~~~G 88 (121)
T d1a9xa4 82 GVIVQYG 88 (121)
T ss_dssp EEECSSS
T ss_pred EEEeehh
Confidence 7766554
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=95.63 E-value=0.0089 Score=49.28 Aligned_cols=38 Identities=21% Similarity=0.163 Sum_probs=33.9
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK 60 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 60 (374)
|+.+.+||+|+| .|..|...+..|.++|++|+++.|..
T Consensus 2 ~~~~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 2 MMHSQKRVVVLG-SGVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CCCCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 445678999999 79999999999999999999999864
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=95.62 E-value=0.011 Score=42.50 Aligned_cols=37 Identities=16% Similarity=0.230 Sum_probs=33.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
-+++|+|.| .|++|-+++..|.+.|++|+++.|.+..
T Consensus 20 ~p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~~ 56 (116)
T d1gesa2 20 LPERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDAP 56 (116)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCEEEEEC-CChhhHHHHHHhhccccEEEEEeecchh
Confidence 358899999 7999999999999999999999988653
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=95.56 E-value=0.0095 Score=43.05 Aligned_cols=36 Identities=22% Similarity=0.309 Sum_probs=32.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
.+++|+|.| .|++|-+++..|...|.+|+++.|.+.
T Consensus 21 ~p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~ 56 (117)
T d1onfa2 21 ESKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGNR 56 (117)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CCCEEEEEC-CchHHHHHHHHHHhccccceeeehhcc
Confidence 368999999 799999999999999999999998865
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.51 E-value=0.014 Score=45.33 Aligned_cols=97 Identities=13% Similarity=0.111 Sum_probs=56.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEe-CCCCccc-ccccccceeEEeccc-----------chhhHhhhccC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG-HYIIASD-WKKNEHM-TEDMFCHEFHLVDLR-----------VMDNCLKVTKG 90 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~-r~~~~~~-~~~~~~i~~~~~dl~-----------~~~~~~~~~~~ 90 (374)
|.+||.|-| -|.||+.+++.|++++ .+|..+. ..+.... .....+...+..+-. ....+..+..+
T Consensus 1 M~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (172)
T d2czca2 1 MKVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEK 79 (172)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTT
T ss_pred CcEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhcc
Confidence 457999999 7999999999998864 6776665 3322110 001111222222111 11234444568
Q ss_pred CCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 91 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 91 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
+|+||.|.|.+. +..-++...++|+ +.|++|+
T Consensus 80 vDvViEcTG~f~-------------------~~~~~~~hl~~G~-k~Vi~s~ 111 (172)
T d2czca2 80 VDIIVDATPGGI-------------------GAKNKPLYEKAGV-KAIFQGG 111 (172)
T ss_dssp CSEEEECCSTTH-------------------HHHHHHHHHHHTC-EEEECTT
T ss_pred CCEEEECCCCCC-------------------CHHHHHHHHHcCC-CEEEECC
Confidence 999999999542 1233455667887 5666665
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.51 E-value=0.056 Score=44.31 Aligned_cols=103 Identities=12% Similarity=0.052 Sum_probs=63.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccc-------------------------cccceeEEecc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTED-------------------------MFCHEFHLVDL 78 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-------------------------~~~i~~~~~dl 78 (374)
+..+|+|.| .|-+|++++..|...|. ++++++...-...... .+.+.+...+.
T Consensus 29 ~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~ 107 (247)
T d1jw9b_ 29 KDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA 107 (247)
T ss_dssp HHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred hCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhh
Confidence 457999999 78899999999999996 7888875432111100 01222222222
Q ss_pred -cchhhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccC
Q 017290 79 -RVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147 (374)
Q Consensus 79 -~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~ 147 (374)
.+.......+...|+||.+.. |......+-++|.+.++ .+|+.+....++
T Consensus 108 ~~~~~~~~~~~~~~divid~~d------------------~~~~~~~in~~~~~~~i-p~i~g~~~~~~g 158 (247)
T d1jw9b_ 108 LLDDAELAALIAEHDLVLDCTD------------------NVAVRNQLNAGCFAAKV-PLVSGAAIRMEG 158 (247)
T ss_dssp CCCHHHHHHHHHTSSEEEECCS------------------SHHHHHHHHHHHHHHTC-CEEEEEEEBTEE
T ss_pred hhhhccccccccccceeeeccc------------------hhhhhhhHHHHHHHhCC-Cccccccccccc
Confidence 123344555567888887764 44445566778888887 477665554444
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.51 E-value=0.009 Score=46.46 Aligned_cols=76 Identities=20% Similarity=0.166 Sum_probs=48.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccccccceeEEecccchhhHhhhc-----cCCCEEEEc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT-----KGVDHVFNL 97 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~-----~~~d~vi~~ 97 (374)
....+|||.|+ |-+|...++.+...|. .|+++++++.+.......+...+.-...+.+.+.+.+ .++|+||.+
T Consensus 27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~vid~ 105 (176)
T d2fzwa2 27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFEC 105 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCCchhhHHHHHHHHHcCCCCcEeeec
Confidence 35678999997 5689999999988885 6777777766543333334333322212222222222 379999999
Q ss_pred ccc
Q 017290 98 AAD 100 (374)
Q Consensus 98 a~~ 100 (374)
.+.
T Consensus 106 ~G~ 108 (176)
T d2fzwa2 106 IGN 108 (176)
T ss_dssp SCC
T ss_pred CCC
Confidence 983
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.50 E-value=0.011 Score=42.47 Aligned_cols=39 Identities=15% Similarity=0.296 Sum_probs=33.5
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
+..+++++|.| +|++|-+++..|.+.|++|+++.+.+.-
T Consensus 18 ~~~p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~i 56 (115)
T d1lvla2 18 KALPQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARERI 56 (115)
T ss_dssp SSCCSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred ccCCCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeeccc
Confidence 33458899998 7999999999999999999999887653
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.50 E-value=0.037 Score=49.38 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=29.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKK 60 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 60 (374)
+..||||+|+ |-+|.++++.|...|. ++++++...
T Consensus 36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~ 71 (426)
T d1yovb1 36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT 71 (426)
T ss_dssp HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 3568999996 5599999999999996 788888653
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=95.50 E-value=0.014 Score=42.25 Aligned_cols=39 Identities=13% Similarity=0.129 Sum_probs=34.2
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
...+++++|+| +|+||-+++..|.+.|.+|+++.+.+.-
T Consensus 19 ~~~p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~l 57 (119)
T d3lada2 19 QNVPGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDKF 57 (119)
T ss_dssp SSCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred ccCCCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeeccc
Confidence 33558999999 7999999999999999999999988653
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.47 E-value=0.0077 Score=46.44 Aligned_cols=74 Identities=15% Similarity=0.142 Sum_probs=48.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhh---HhhhccCCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDN---CLKVTKGVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~---~~~~~~~~d~vi~~a~ 99 (374)
....+|+|.|+ |-+|...++.+...|.+|+++++++.+.......+...+ .|..+.+. +.+...+.+.+|.+++
T Consensus 26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~-i~~~~~~~~~~~~~~~~g~~~~i~~~~ 102 (166)
T d1llua2 26 RPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLT-VNARQEDPVEAIQRDIGGAHGVLVTAV 102 (166)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHHSSEEEEEECCS
T ss_pred CCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCcccc-ccccchhHHHHHHHhhcCCcccccccc
Confidence 35678999885 999999999888889999999998765443333333222 23333333 3333346677776665
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.34 E-value=0.024 Score=44.66 Aligned_cols=67 Identities=13% Similarity=0.146 Sum_probs=50.0
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
....++|+|.| .|.||+.+++.|..-|.+|++.++........ . ...+.+.++++.+|+|+.++...
T Consensus 41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~------~-----~~~~~l~ell~~sDii~i~~plt 107 (188)
T d1sc6a1 41 EARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLGN------A-----TQVQHLSDLLNMSDVVSLHVPEN 107 (188)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCTT------C-----EECSCHHHHHHHCSEEEECCCSS
T ss_pred cccceEEEEee-cccchhhhhhhcccccceEeeccccccchhhh------h-----hhhhhHHHHHhhccceeecccCC
Confidence 45678999998 99999999999988999999999865432211 1 11235667788899888877643
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.32 E-value=0.013 Score=42.79 Aligned_cols=37 Identities=22% Similarity=0.179 Sum_probs=33.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
-+++++|+| .|++|-+++..|.+.|.+|+++.|.+.-
T Consensus 21 ~pk~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~~~ 57 (125)
T d3grsa2 21 LPGRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHDKV 57 (125)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCEEEEEc-CCccHHHHHHHHhcCCcEEEEEeecccc
Confidence 358999999 6999999999999999999999998653
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.31 E-value=0.01 Score=45.29 Aligned_cols=70 Identities=13% Similarity=0.038 Sum_probs=52.7
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
....+|++.|.| .|.||+.+++.|...|.+|++....|.+..+....+.. ...+.+++...|+||-+.+.
T Consensus 20 ~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~--------v~~~~~a~~~adivvtaTGn 89 (163)
T d1li4a1 20 VMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYE--------VTTMDEACQEGNIFVTTTGC 89 (163)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE--------ECCHHHHTTTCSEEEECSSC
T ss_pred ceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceE--------eeehhhhhhhccEEEecCCC
Confidence 445779999998 99999999999999999999999887543333222222 22356677788999888874
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=95.29 E-value=0.031 Score=41.34 Aligned_cols=86 Identities=14% Similarity=0.095 Sum_probs=56.5
Q ss_pred CCCeEEEEcCc---chhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 25 EKLRISVTGAG---GFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 25 ~~~~ilItGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
..++|.|+|+| +..|..+++.|++.||++..+.-++.... + ........+.++-..+|.++-+...
T Consensus 12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~---------i-~g~~~~~~l~~i~~~iD~v~v~~p~- 80 (136)
T d1iuka_ 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEE---------L-FGEEAVASLLDLKEPVDILDVFRPP- 80 (136)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSE---------E-TTEECBSSGGGCCSCCSEEEECSCH-
T ss_pred CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccce---------e-eceecccchhhccCCCceEEEeccH-
Confidence 35789999998 78999999999999999988765432110 0 1111222334444578988888742
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEE
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFY 139 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~ 139 (374)
.....+++.|.+.|++.+++
T Consensus 81 ------------------~~v~~~v~~~~~~g~k~i~~ 100 (136)
T d1iuka_ 81 ------------------SALMDHLPEVLALRPGLVWL 100 (136)
T ss_dssp ------------------HHHTTTHHHHHHHCCSCEEE
T ss_pred ------------------HHHHHHHHHHHhhCCCeEEE
Confidence 22345677777888865544
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.28 E-value=0.013 Score=42.56 Aligned_cols=34 Identities=18% Similarity=0.090 Sum_probs=30.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWK 59 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~ 59 (374)
.+++++|+| .|+||-+++..|.+.|.+|+++.|+
T Consensus 19 ~P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 19 CPGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CCCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence 457899999 7999999999999999999999875
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=95.26 E-value=0.015 Score=43.05 Aligned_cols=37 Identities=22% Similarity=0.280 Sum_probs=33.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
..++|+|+| +|++|-+++..|.+.|.+|+++.+.+..
T Consensus 34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~~ 70 (133)
T d1q1ra2 34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAARV 70 (133)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecccc
Confidence 458999998 7999999999999999999999988753
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=95.25 E-value=0.012 Score=42.75 Aligned_cols=35 Identities=23% Similarity=0.280 Sum_probs=31.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
.++++|.| .|++|-+++..|.+.|++|+++.|.+.
T Consensus 32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CCcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence 47899998 799999999999999999999988754
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=95.22 E-value=0.022 Score=43.46 Aligned_cols=59 Identities=15% Similarity=0.140 Sum_probs=46.9
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccccC
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~ 102 (374)
+..+++|+|.|-+..+|+.++..|.++|..|+++.+... .+.+..+++|+||.++|...
T Consensus 34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~---------------------~l~~~~~~ADivI~a~G~p~ 92 (166)
T d1b0aa1 34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK---------------------NLRHHVENADLLIVAVGKPG 92 (166)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS---------------------CHHHHHHHCSEEEECSCCTT
T ss_pred ccccceEEEEeccccccHHHHHHHHHhhccccccccccc---------------------hhHHHHhhhhHhhhhccCcc
Confidence 457899999999999999999999999999988865532 13344567899999888543
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=95.20 E-value=0.012 Score=46.97 Aligned_cols=68 Identities=16% Similarity=0.127 Sum_probs=47.8
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc-CCCEEEEccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK-GVDHVFNLAA 99 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~-~~d~vi~~a~ 99 (374)
...+++|.|-| -|.+|+++++.|.+.|.+|++.+.++.........+.+.+ + ..+++. .||+++-||.
T Consensus 24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~-----~---~~~~~~~~~DI~iPcA~ 92 (201)
T d1c1da1 24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-----A---LEDVLSTPCDVFAPCAM 92 (201)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-----C---GGGGGGCCCSEEEECSC
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhccccc-----C---ccccccccceeeecccc
Confidence 45789999998 8999999999999999999998876543222221122211 1 123444 8999999985
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=95.08 E-value=0.034 Score=43.24 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=33.7
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
..+++|+|+| +|..|-+.+..|.++||+|+++.+.+.
T Consensus 41 ~~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 41 VQKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp SSCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccCc
Confidence 4679999999 799999999999999999999998764
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=95.07 E-value=0.006 Score=47.47 Aligned_cols=75 Identities=15% Similarity=0.193 Sum_probs=47.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccccccc-eeEEecccchhhHhhhc--cCCCEEEEcccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDMFCH-EFHLVDLRVMDNCLKVT--KGVDHVFNLAAD 100 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~i-~~~~~dl~~~~~~~~~~--~~~d~vi~~a~~ 100 (374)
...+|+|.|+ |.+|...++.+...|. .|+++++++.+.......+. +++..+-.+.+...+.. +++|+||.+++.
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g~ 110 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGS 110 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCC
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCcccHHHHHHHhhCCCCceEEEEecCc
Confidence 4578999885 9999999998887774 67777877654333332232 23322212223333333 269999999983
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=95.02 E-value=0.021 Score=44.97 Aligned_cols=70 Identities=16% Similarity=0.054 Sum_probs=50.6
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
....++|.|.| .|.||+.+++.|..-|.+|.+.++...........+ +....++.++++.+|+|+.+...
T Consensus 41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~-------~~~~~~l~~~l~~sD~v~~~~pl 110 (188)
T d2naca1 41 DLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELN-------LTWHATREDMYPVCDVVTLNCPL 110 (188)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHT-------CEECSSHHHHGGGCSEEEECSCC
T ss_pred eccccceeecc-ccccchhhhhhhhccCceEEEEeecccccccccccc-------ccccCCHHHHHHhccchhhcccc
Confidence 34678999998 899999999999988999999998754322211111 12234566778889988777664
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=95.00 E-value=0.011 Score=45.76 Aligned_cols=66 Identities=12% Similarity=0.210 Sum_probs=44.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccccc-ccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDM-FCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
..++|+|.| +|-.|++++..|.+.|. +|+++.|+.++...... .+... .+ .. ....+|+||++...
T Consensus 16 ~~~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~--~~--~~-----~~~~~DliINaTpi 83 (167)
T d1npya1 16 KNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY--IN--SL-----ENQQADILVNVTSI 83 (167)
T ss_dssp TTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE--ES--CC-----TTCCCSEEEECSST
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh--hh--cc-----cccchhhheecccc
Confidence 458899999 58899999999999996 79999998764332211 11111 11 10 12368999998653
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.98 E-value=0.046 Score=41.94 Aligned_cols=59 Identities=10% Similarity=0.019 Sum_probs=47.0
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
.+..+++|.|+|-+.-+|+.++..|+++|..|+.+...... +.+..++.|++|.+++..
T Consensus 35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~---------------------l~~~~~~aDivi~a~G~~ 93 (170)
T d1a4ia1 35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH---------------------LDEEVNKGDILVVATGQP 93 (170)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS---------------------HHHHHTTCSEEEECCCCT
T ss_pred cccccceEEEEecCCccchHHHHHHHhccCceEEEeccccc---------------------HHHHHhhccchhhccccc
Confidence 45688999999999999999999999999999988765432 233456778888877753
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=94.95 E-value=0.026 Score=43.61 Aligned_cols=96 Identities=9% Similarity=0.120 Sum_probs=54.9
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeC-CCCccc-ccccccceeEEec-----------ccchhhHhhhccCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEG-HYIIASDW-KKNEHM-TEDMFCHEFHLVD-----------LRVMDNCLKVTKGV 91 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r-~~~~~~-~~~~~~i~~~~~d-----------l~~~~~~~~~~~~~ 91 (374)
|++|.|-| -|.||+.+++.|++++ .+|.++.- .+.... .....+....... +.-...+..+++++
T Consensus 1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~v 79 (171)
T d1cf2o1 1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA 79 (171)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCC
Confidence 67999998 8999999999998875 57766653 222100 0000011111111 11111334455689
Q ss_pred CEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeec
Q 017290 92 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss 142 (374)
|+||.|.|.+. +..-++...++|+ ++|+.|+
T Consensus 80 DvViEcTG~f~-------------------~~~~~~~hl~~G~-K~vi~~~ 110 (171)
T d1cf2o1 80 DIVIDCTPEGI-------------------GAKNLKMYKEKGI-KAIFQGG 110 (171)
T ss_dssp SEEEECCSTTH-------------------HHHHHHHHHHTTC-EEEECTT
T ss_pred CEEEEccCCCC-------------------CHHHHHHHHHcCC-CEEEECC
Confidence 99999998531 1223445556786 6776655
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.92 E-value=0.038 Score=42.51 Aligned_cols=80 Identities=16% Similarity=0.104 Sum_probs=54.8
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccc--cceeEEecc--cchhhHhhhccCCCEEEEc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMF--CHEFHLVDL--RVMDNCLKVTKGVDHVFNL 97 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~i~~~~~dl--~~~~~~~~~~~~~d~vi~~ 97 (374)
.+..+|+|+|.|-+.-+|+.++..|+++|..|+.+............. -......++ ...+.+.+....+|+||..
T Consensus 25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsa 104 (171)
T d1edza1 25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITG 104 (171)
T ss_dssp CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEEc
Confidence 366889999999999999999999999999999887654321111000 001112222 2345577777789999999
Q ss_pred cccc
Q 017290 98 AADM 101 (374)
Q Consensus 98 a~~~ 101 (374)
++..
T Consensus 105 vG~p 108 (171)
T d1edza1 105 VPSE 108 (171)
T ss_dssp CCCT
T ss_pred cCCC
Confidence 8854
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=94.90 E-value=0.0052 Score=47.82 Aligned_cols=73 Identities=12% Similarity=0.120 Sum_probs=47.9
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCccccccc---ccceeEEecccchhhHhhhccCCCEEEEcc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM---FCHEFHLVDLRVMDNCLKVTKGVDHVFNLA 98 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a 98 (374)
.....++|+|.| +|-.+++++..|.+.+.+|+++.|+.++...... ....+...+.. ...+..+|+||++.
T Consensus 14 ~~~~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~-----~~~~~~~diiIN~t 87 (171)
T d1p77a1 14 WLRPNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMD-----SIPLQTYDLVINAT 87 (171)
T ss_dssp CCCTTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG-----GCCCSCCSEEEECC
T ss_pred CCCCCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhc-----cccccccceeeecc
Confidence 345778999999 5777999999999888899999999754322210 00111111111 11246899999997
Q ss_pred cc
Q 017290 99 AD 100 (374)
Q Consensus 99 ~~ 100 (374)
..
T Consensus 88 p~ 89 (171)
T d1p77a1 88 SA 89 (171)
T ss_dssp CC
T ss_pred cc
Confidence 64
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=94.84 E-value=0.022 Score=45.19 Aligned_cols=75 Identities=15% Similarity=0.040 Sum_probs=50.1
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCcccccccccceeEEecccchh---hHhhhcc--CCCEEEEc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTEDMFCHEFHLVDLRVMD---NCLKVTK--GVDHVFNL 97 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~---~~~~~~~--~~d~vi~~ 97 (374)
....+|||.|+ |-+|...+..+...|. .|+++++++++.......+...+. +..+.+ .+.++.. ++|++|.+
T Consensus 24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~vid~ 101 (195)
T d1kola2 24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIAD-LSLDTPLHEQIAALLGEPEVDCAVDA 101 (195)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEE-TTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEE-eCCCcCHHHHHHHHhCCCCcEEEEEC
Confidence 35679999984 9999888888877775 788888887654444444444332 222222 3334333 79999999
Q ss_pred ccc
Q 017290 98 AAD 100 (374)
Q Consensus 98 a~~ 100 (374)
.+.
T Consensus 102 vG~ 104 (195)
T d1kola2 102 VGF 104 (195)
T ss_dssp CCT
T ss_pred ccc
Confidence 984
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=94.82 E-value=0.027 Score=44.27 Aligned_cols=38 Identities=8% Similarity=-0.059 Sum_probs=31.6
Q ss_pred CCCeEEE-EcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 25 EKLRISV-TGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 25 ~~~~ilI-tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
.+.+++| +||+|-+|...++.....|.+|++++|++..
T Consensus 28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~ 66 (189)
T d1gu7a2 28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN 66 (189)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccc
Confidence 3456676 5899999999999988889999999987654
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=94.74 E-value=0.014 Score=43.95 Aligned_cols=36 Identities=17% Similarity=0.211 Sum_probs=30.2
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhC--CCEEEEEeCCCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSE--GHYIIASDWKKN 61 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~ 61 (374)
|++|.|.|+||.||...++-+.+. .++|.+++-..+
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N 38 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKN 38 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSC
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence 678999999999999999999886 478888775443
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=94.72 E-value=0.019 Score=41.76 Aligned_cols=40 Identities=13% Similarity=0.233 Sum_probs=34.7
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH 63 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 63 (374)
...+++++|.| +|+||-+++..|.+.|.+|+++.|.+...
T Consensus 22 ~~~p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~~l 61 (123)
T d1dxla2 22 SEIPKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASEIV 61 (123)
T ss_dssp SSCCSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred cccCCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccccC
Confidence 33458999999 79999999999999999999999987643
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=94.71 E-value=0.018 Score=45.43 Aligned_cols=70 Identities=14% Similarity=0.062 Sum_probs=49.8
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
....++|.|.| .|.||+.+++.|..-|.+|.+.++........... .....+.+.++++.+|+|+.+...
T Consensus 44 ~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~-------~~~~~~~l~~ll~~sD~v~l~~pl 113 (191)
T d1gdha1 44 KLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASY-------QATFHDSLDSLLSVSQFFSLNAPS 113 (191)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHH-------TCEECSSHHHHHHHCSEEEECCCC
T ss_pred eecccceEEee-cccchHHHHHHHHhhccccccccccccccchhhcc-------cccccCCHHHHHhhCCeEEecCCC
Confidence 44679999998 89999999999988899999998765432211110 011224567788889988777664
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.65 E-value=0.022 Score=44.64 Aligned_cols=70 Identities=16% Similarity=0.091 Sum_probs=49.9
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
.....+++.|+| .|.||+.+++.|..-|.+|++.++...+..... ..+ ....+.++++.+|+|+.+....
T Consensus 40 ~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~-~~~--------~~~~l~ell~~sDiv~~~~Plt 109 (184)
T d1ygya1 40 TEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ-LGI--------ELLSLDDLLARADFISVHLPKT 109 (184)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH-HTC--------EECCHHHHHHHCSEEEECCCCS
T ss_pred ccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhh-cCc--------eeccHHHHHhhCCEEEEcCCCC
Confidence 345678999998 899999999999888999999998754322111 011 1234567788899888877643
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=94.58 E-value=0.03 Score=40.79 Aligned_cols=39 Identities=13% Similarity=0.198 Sum_probs=34.0
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
...+++++|.| .|+||-+++..|.+.|.+|+++.+.+.-
T Consensus 23 ~~~p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~~i 61 (125)
T d1ojta2 23 KEVPGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMDGL 61 (125)
T ss_dssp CCCCSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cccCCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence 33468999999 7999999999999999999999988653
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=94.57 E-value=0.029 Score=39.54 Aligned_cols=36 Identities=19% Similarity=0.162 Sum_probs=29.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
.+|+|+|+| +|.-|.-++..|.+...+|+.+.|++.
T Consensus 31 ~gK~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~~ 66 (107)
T d2gv8a2 31 VGESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLGG 66 (107)
T ss_dssp TTCCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCCeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecCc
Confidence 579999999 789999999999887766666666554
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=94.47 E-value=0.017 Score=43.46 Aligned_cols=36 Identities=19% Similarity=0.224 Sum_probs=30.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhC--CCEEEEEeCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSE--GHYIIASDWKK 60 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~ 60 (374)
++++|.|.|+||.||....+-+.+. .++|.+++-..
T Consensus 1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~ 38 (150)
T d1r0ka2 1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR 38 (150)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence 4689999999999999999999875 57888877554
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=94.46 E-value=0.036 Score=42.93 Aligned_cols=77 Identities=21% Similarity=0.184 Sum_probs=54.3
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecc----------------------cchh
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDL----------------------RVMD 82 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl----------------------~~~~ 82 (374)
.+-+|+|.| .|-.|..-++....-|..|.+++.+...........-.++..+. ...+
T Consensus 28 ~pa~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~ 106 (183)
T d1l7da1 28 PPARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 106 (183)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred CCcEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence 456899999 69999999999999999999999988754433322222222111 1234
Q ss_pred hHhhhccCCCEEEEcccccC
Q 017290 83 NCLKVTKGVDHVFNLAADMG 102 (374)
Q Consensus 83 ~~~~~~~~~d~vi~~a~~~~ 102 (374)
.+.+.++++|+||-.+-..+
T Consensus 107 ~l~~~l~~aDlVI~talipG 126 (183)
T d1l7da1 107 AVLKELVKTDIAITTALIPG 126 (183)
T ss_dssp HHHHHHTTCSEEEECCCCTT
T ss_pred HHHHHHHhhhhheeeeecCC
Confidence 56666789999999987654
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=94.39 E-value=0.059 Score=42.81 Aligned_cols=72 Identities=10% Similarity=-0.086 Sum_probs=44.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccc-c---------ccccceeEE-ecccchhhHhhhcc-CCCEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-E---------DMFCHEFHL-VDLRVMDNCLKVTK-GVDHV 94 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~---------~~~~i~~~~-~dl~~~~~~~~~~~-~~d~v 94 (374)
|||++.| ++-.|..+++.|++.|++|.++...+.+... . ...++.++. .++.+.+.++.+-+ ++|++
T Consensus 1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~~~Dli 79 (203)
T d2blna2 1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVI 79 (203)
T ss_dssp CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEE
T ss_pred CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhhhcccce
Confidence 7888897 5668999999999999999765533221110 0 122455544 34444443333322 89988
Q ss_pred EEccc
Q 017290 95 FNLAA 99 (374)
Q Consensus 95 i~~a~ 99 (374)
|.+..
T Consensus 80 i~~g~ 84 (203)
T d2blna2 80 FSFYY 84 (203)
T ss_dssp EEESC
T ss_pred eeeec
Confidence 88764
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=94.31 E-value=0.13 Score=38.78 Aligned_cols=32 Identities=13% Similarity=0.116 Sum_probs=26.7
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
||.+.| .|.+|..+++.|++.|+.| +..|..+
T Consensus 2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~ 33 (156)
T d2cvza2 2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFE 33 (156)
T ss_dssp CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTH
T ss_pred eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHH
Confidence 688898 7999999999999999876 4566654
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=94.16 E-value=0.03 Score=47.93 Aligned_cols=36 Identities=28% Similarity=0.526 Sum_probs=32.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
++|||+|+| +|.-|..+|..|.+.|++|.++.+++.
T Consensus 1 k~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 1 KSKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 368999999 799999999999999999999987765
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=94.16 E-value=0.042 Score=39.52 Aligned_cols=37 Identities=14% Similarity=0.088 Sum_probs=32.8
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
..++|+|+| +|++|-.++..|...|.+|+++.|.+.-
T Consensus 21 ~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~~ 57 (121)
T d1mo9a2 21 PGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEPL 57 (121)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccchh
Confidence 358999998 7999999999999999999999988643
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=93.93 E-value=0.22 Score=37.95 Aligned_cols=94 Identities=15% Similarity=0.129 Sum_probs=57.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc------------cccc------ccc-----cceeEEecccchhh
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE------------HMTE------DMF-----CHEFHLVDLRVMDN 83 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~~~~------~~~-----~i~~~~~dl~~~~~ 83 (374)
|||.|-| =|.||+.+.+.|.+++.+|.++.-.... .... ... +-.+....-.++++
T Consensus 1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~ 79 (168)
T d2g82a1 1 MKVGING-FGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE 79 (168)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCChHH
Confidence 6899998 8999999999999999998887643210 0000 000 11111222234444
Q ss_pred HhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEe
Q 017290 84 CLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYA 140 (374)
Q Consensus 84 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~ 140 (374)
+.-.-.++|+||-|.|.+.. ...++...+.|++|+|..
T Consensus 80 i~W~~~gvdiViEcTG~f~~-------------------~~~~~~hl~~gakkViiS 117 (168)
T d2g82a1 80 IPWAEAGVGVVIESTGVFTD-------------------ADKAKAHLEGGAKKVIIT 117 (168)
T ss_dssp CCTGGGTEEEEEECSSSCCB-------------------HHHHTHHHHTTCSEEEES
T ss_pred CcccccCCceeEeccccccc-------------------hHHhhhhhccccceeeec
Confidence 44433489999999996531 223344556788888874
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.86 E-value=0.052 Score=49.92 Aligned_cols=104 Identities=12% Similarity=-0.003 Sum_probs=65.7
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCCccccc-------------------------ccc--cceeEEe
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKNEHMTE-------------------------DMF--CHEFHLV 76 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-------------------------~~~--~i~~~~~ 76 (374)
+..+|+|+|+ |-+|.++++.|.-.|. .+++++...-..... ..+ .++++..
T Consensus 24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~ 102 (529)
T d1yova1 24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEE 102 (529)
T ss_dssp HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESS
T ss_pred hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcC
Confidence 3468999995 7799999999999995 788887543110000 001 2233333
Q ss_pred cccch-hhHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEEEeecccccCC
Q 017290 77 DLRVM-DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPE 148 (374)
Q Consensus 77 dl~~~-~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i~~Ss~~vy~~ 148 (374)
++.+. +.-...++++|+||.+.. +......+-++|++.++ .+|..++.+.||.
T Consensus 103 ~~~~~~~~~~~~~~~~dvVv~~~~------------------~~~~~~~l~~~c~~~~i-p~i~~~~~G~~G~ 156 (529)
T d1yova1 103 SPENLLDNDPSFFCRFTVVVATQL------------------PESTSLRLADVLWNSQI-PLLICRTYGLVGY 156 (529)
T ss_dssp CHHHHHHSCGGGGGGCSEEEEESC------------------CHHHHHHHHHHHHHHTC-CEEEEEEETTEEE
T ss_pred CchhhhhhHHHHhcCCCEEEECCC------------------CHHHHHHHHHHHHHcCC-CEEEEeccCCEEE
Confidence 32221 111244567888887653 44445667889999998 5888888777764
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.86 E-value=0.026 Score=42.52 Aligned_cols=36 Identities=17% Similarity=0.134 Sum_probs=32.5
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeC
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDW 58 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r 58 (374)
+..++++|||+|| |.+|..-++.|++.|.+|++++-
T Consensus 9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap 44 (150)
T d1kyqa1 9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP 44 (150)
T ss_dssp ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence 5568899999995 99999999999999999999964
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=93.79 E-value=0.02 Score=44.37 Aligned_cols=112 Identities=17% Similarity=0.122 Sum_probs=63.3
Q ss_pred CCeEEEEcCcchhHHH--HHHHHHhC----CCEEEEEeCCCCcccccc--------cccceeEEecccchhhHhhhccCC
Q 017290 26 KLRISVTGAGGFIASH--IARRLKSE----GHYIIASDWKKNEHMTED--------MFCHEFHLVDLRVMDNCLKVTKGV 91 (374)
Q Consensus 26 ~~~ilItGatG~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~~~--------~~~i~~~~~dl~~~~~~~~~~~~~ 91 (374)
.|||.|.|| |.+|.. ++..|+.. +.++..++.++.+..... ..+.. ..+....+..++++++
T Consensus 2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~---~~i~~~td~~eaL~da 77 (171)
T d1obba1 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGAD---LKFEKTMNLDDVIIDA 77 (171)
T ss_dssp CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCC---CEEEEESCHHHHHTTC
T ss_pred CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCC---eEEEEeCChhhcccCC
Confidence 489999995 888764 34444433 459999999865422100 00111 1122223456688999
Q ss_pred CEEEEcccccCCccc------------------ccCCc-----ceehhhhHHHHHHHHHHHHhCCCC-eEEEee
Q 017290 92 DHVFNLAADMGGMGF------------------IQSNH-----SVIMYNNTMISFNMLEASRISGVK-RFFYAS 141 (374)
Q Consensus 92 d~vi~~a~~~~~~~~------------------~~~~~-----~~~~~~n~~~~~~ll~a~~~~~~~-~~i~~S 141 (374)
|+||..++..+..++ .+.+. -.....|+...+.+++.+++...+ .+|.+|
T Consensus 78 d~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T 151 (171)
T d1obba1 78 DFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA 151 (171)
T ss_dssp SEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence 999999874321100 00000 001224888888899988888765 444443
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=93.72 E-value=0.044 Score=41.45 Aligned_cols=71 Identities=10% Similarity=0.061 Sum_probs=54.0
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
....+|+++|.| -|++|+-+++.|...|..|+++...|-...+....+.++ ..+.++++..|+||-+.+..
T Consensus 19 ~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~v--------~~~~~a~~~aDi~vTaTGn~ 89 (163)
T d1v8ba1 19 FLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNV--------VTLDEIVDKGDFFITCTGNV 89 (163)
T ss_dssp CCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEE--------CCHHHHTTTCSEEEECCSSS
T ss_pred ceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCcc--------CchhHccccCcEEEEcCCCC
Confidence 445679999998 999999999999999999999998875543333233332 34566788889999988843
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=93.69 E-value=0.0089 Score=46.72 Aligned_cols=75 Identities=16% Similarity=0.071 Sum_probs=45.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccc---cceeEEecccchhhHhhhccCCCEEEEcccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMF---CHEFHLVDLRVMDNCLKVTKGVDHVFNLAAD 100 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~ 100 (374)
.+.++|+|.| +|..+++++-.|.+.| +|+++.|+.++....... ..........+...+...+..+|++|++...
T Consensus 16 ~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~tp~ 93 (177)
T d1nvta1 16 VKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPI 93 (177)
T ss_dssp CCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCT
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccCCcc
Confidence 5779999999 5778999999997766 999999986653221100 0000000001112233345578999999764
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=93.66 E-value=0.049 Score=44.71 Aligned_cols=37 Identities=22% Similarity=0.228 Sum_probs=33.1
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
..+||+|+| .|..|..++..|.++|++|+++.|++..
T Consensus 3 ~~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~~~ 39 (265)
T d2voua1 3 TTDRIAVVG-GSISGLTAALMLRDAGVDVDVYERSPQP 39 (265)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 568999999 6999999999999999999999987643
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.59 E-value=0.035 Score=43.48 Aligned_cols=36 Identities=19% Similarity=0.123 Sum_probs=32.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKN 61 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~ 61 (374)
.++||+|+| +|..|-..+..|.+.|+ +|+++.+++.
T Consensus 3 ~~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 3 YSAKIALLG-AGPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GGCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 358999999 79999999999999998 5999998764
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=93.50 E-value=0.084 Score=40.58 Aligned_cols=77 Identities=18% Similarity=0.175 Sum_probs=48.5
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCcccccccccceeEEecccch----hhHhhhc--cCCCEE
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNEHMTEDMFCHEFHLVDLRVM----DNCLKVT--KGVDHV 94 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~----~~~~~~~--~~~d~v 94 (374)
......+|+|.|+. -+|...+..+...| .+|+++++++++.......+...+. |..+. +.+.... .++|++
T Consensus 25 ~~k~g~~VlI~G~G-g~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~i-n~~~~~~~~~~~~~~~~~~G~d~v 102 (175)
T d1cdoa2 25 KVEPGSTCAVFGLG-AVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFV-NPNDHSEPISQVLSKMTNGGVDFS 102 (175)
T ss_dssp CCCTTCEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEE-CGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred CCCCCCEEEEEecC-CccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEE-cCCCcchhHHHHHHhhccCCccee
Confidence 34456789999964 47777777777765 5899999988765544444443322 22222 2233322 379999
Q ss_pred EEcccc
Q 017290 95 FNLAAD 100 (374)
Q Consensus 95 i~~a~~ 100 (374)
|.+.+.
T Consensus 103 id~~G~ 108 (175)
T d1cdoa2 103 LECVGN 108 (175)
T ss_dssp EECSCC
T ss_pred eeecCC
Confidence 999983
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=93.20 E-value=0.039 Score=46.09 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=31.0
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
|+|+|+| +|.-|...+..|.++|++|+++-+++.
T Consensus 1 m~V~IIG-aG~aGL~aA~~L~~~G~~V~vlE~~~~ 34 (347)
T d2ivda1 1 MNVAVVG-GGISGLAVAHHLRSRGTDAVLLESSAR 34 (347)
T ss_dssp CCEEEEC-CBHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred CeEEEEC-CCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 7899999 599999999999999999999987754
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.18 E-value=0.14 Score=40.41 Aligned_cols=31 Identities=23% Similarity=0.440 Sum_probs=26.9
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDW 58 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r 58 (374)
|||++.| ++..|..+++.|+++||+|.++..
T Consensus 1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t 31 (203)
T d2bw0a2 1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFT 31 (203)
T ss_dssp CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEc
Confidence 7899998 678899999999999999986653
|
| >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Methionyl-tRNAfmet formyltransferase species: Escherichia coli [TaxId: 562]
Probab=93.02 E-value=0.18 Score=39.84 Aligned_cols=74 Identities=16% Similarity=0.033 Sum_probs=46.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC-Cccccc------------ccccceeEEecccchhhHhhhcc--
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK-NEHMTE------------DMFCHEFHLVDLRVMDNCLKVTK-- 89 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~------------~~~~i~~~~~dl~~~~~~~~~~~-- 89 (374)
.+|||+++| ++..+..+.+.|.+.|++|.++...+ ...... ...++.+......+.+...+.++
T Consensus 2 ~~mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (206)
T d1fmta2 2 ESLRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAEL 80 (206)
T ss_dssp CCCEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHHT
T ss_pred CCcEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhhh
Confidence 468999998 67889999999999999976654332 211100 11244555555545555555554
Q ss_pred CCCEEEEccc
Q 017290 90 GVDHVFNLAA 99 (374)
Q Consensus 90 ~~d~vi~~a~ 99 (374)
++|++|-+..
T Consensus 81 ~~d~~v~~~~ 90 (206)
T d1fmta2 81 QADVMVVVAY 90 (206)
T ss_dssp TCSEEEEESC
T ss_pred cceEEEeecc
Confidence 7887777664
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=92.78 E-value=0.062 Score=44.90 Aligned_cols=35 Identities=23% Similarity=0.289 Sum_probs=31.6
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
.|||+|+| +|.-|...+.+|.+.|++|+++.+++.
T Consensus 1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~~ 35 (373)
T d1seza1 1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEGK 35 (373)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 48999999 799999999999999999999987654
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=92.76 E-value=0.053 Score=44.91 Aligned_cols=32 Identities=31% Similarity=0.322 Sum_probs=29.5
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKK 60 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 60 (374)
.|+|+| +|.+|..++.+|.++|++|+++.+..
T Consensus 6 DvvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIG-GGIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 399999 79999999999999999999999864
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=92.73 E-value=0.069 Score=40.85 Aligned_cols=35 Identities=17% Similarity=0.214 Sum_probs=30.3
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCC--EEEEEeCCCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGH--YIIASDWKKN 61 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~ 61 (374)
.|||+|+| .|++|-.++..|.+.++ +|+++.+.+.
T Consensus 2 gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~~ 38 (186)
T d1fcda1 2 GRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNTD 38 (186)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCSC
T ss_pred CCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCCc
Confidence 58999999 79999999999999874 7888887763
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=92.30 E-value=0.075 Score=45.06 Aligned_cols=37 Identities=19% Similarity=0.297 Sum_probs=33.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
..+++|+|+| +|..|-..+..|.++|++|+++.+.+.
T Consensus 28 ~~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~~ 64 (370)
T d2iida1 28 SNPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASER 64 (370)
T ss_dssp SSCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4668999999 799999999999999999999987654
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=92.18 E-value=0.14 Score=41.25 Aligned_cols=37 Identities=24% Similarity=0.264 Sum_probs=33.3
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
...++|+|+| +|..|-..+..|.+.|++|+++.+.+.
T Consensus 47 ~~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 47 KNKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp SSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEEc-ccHHHHHHHHHHHHhccceeeEeeccc
Confidence 3678999999 799999999999999999999987764
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=92.07 E-value=0.097 Score=44.83 Aligned_cols=37 Identities=16% Similarity=0.191 Sum_probs=32.2
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKN 61 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~ 61 (374)
..+|+|+|+| +|.-|-.++..|+++| ++|+++-|++.
T Consensus 2 ~~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 2 PTIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CSCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 3678999999 7999999999998876 69999998865
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=92.03 E-value=0.35 Score=39.20 Aligned_cols=37 Identities=22% Similarity=0.150 Sum_probs=32.2
Q ss_pred CCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCC
Q 017290 22 WPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWK 59 (374)
Q Consensus 22 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~ 59 (374)
...++++|+|-| -|-+|+++++.|.+.|.+|++++-.
T Consensus 27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~ 63 (242)
T d1v9la1 27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI 63 (242)
T ss_dssp SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence 356789999998 8999999999999999999877643
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=91.91 E-value=0.069 Score=45.15 Aligned_cols=35 Identities=14% Similarity=0.274 Sum_probs=31.6
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
|.+|+|+| +|.-|..++..|.+.|++|.++.+++.
T Consensus 1 M~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~~ 35 (298)
T d1i8ta1 1 MYDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRNH 35 (298)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred CccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 56799999 799999999999999999999988764
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=91.69 E-value=0.12 Score=39.79 Aligned_cols=35 Identities=14% Similarity=0.120 Sum_probs=29.4
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK 60 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 60 (374)
..++|+|+| +|++|-+++..|.+.|.+|+++.+.+
T Consensus 2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~~ 36 (185)
T d1q1ra1 2 ANDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVGD 36 (185)
T ss_dssp CSCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEecC
Confidence 467899999 79999999999999998877665444
|
| >d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Escherichia coli [TaxId: 562]
Probab=91.44 E-value=0.84 Score=34.37 Aligned_cols=31 Identities=19% Similarity=0.272 Sum_probs=26.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeC
Q 017290 27 LRISVTGAGGFIASHIARRLKSE-GHYIIASDW 58 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r 58 (374)
+||.|-| =|.||+.+.+.++++ ..+|.++.-
T Consensus 2 ikigING-FGRIGR~v~R~~~~~~~i~ivaINd 33 (166)
T d1gado1 2 IKVGING-FGRIGRIVFRAAQKRSDIEIVAIND 33 (166)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred eEEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeC
Confidence 5789998 899999999999987 467777764
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.38 E-value=0.2 Score=41.93 Aligned_cols=30 Identities=10% Similarity=0.010 Sum_probs=25.8
Q ss_pred cCcchhHHHHHHHHHhCCCEEEEEeCCCCc
Q 017290 33 GAGGFIASHIARRLKSEGHYIIASDWKKNE 62 (374)
Q Consensus 33 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 62 (374)
-+||..|.+|+++|+.+|++|+.+.+..+-
T Consensus 43 ~SSGk~G~alA~~~~~~Ga~V~li~g~~s~ 72 (290)
T d1p9oa_ 43 FSSGRRGATSAEAFLAAGYGVLFLYRARSA 72 (290)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEETTSC
T ss_pred CCchHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 346899999999999999999999877543
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=91.13 E-value=0.11 Score=40.61 Aligned_cols=34 Identities=12% Similarity=-0.002 Sum_probs=29.1
Q ss_pred CeEEEEcCcchhHHHHHHHHHhC--CCEEEEEeCCCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSE--GHYIIASDWKKN 61 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~ 61 (374)
|||+|+| +|++|-+++..|.+. +.+|+++.|.+.
T Consensus 1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~~~ 36 (198)
T d1nhpa1 1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKGDF 36 (198)
T ss_dssp CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESSSS
T ss_pred CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCCCc
Confidence 7899999 689999999999886 568999887653
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=91.02 E-value=0.16 Score=38.02 Aligned_cols=36 Identities=19% Similarity=0.270 Sum_probs=29.8
Q ss_pred CCeEEEE-cCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 26 KLRISVT-GAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 26 ~~~ilIt-GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
.+.++|. .+.||+|.++++.|.+.|++|+++.+.+.
T Consensus 39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 3556665 35799999999999999999999998753
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=90.90 E-value=0.088 Score=42.50 Aligned_cols=69 Identities=20% Similarity=0.199 Sum_probs=46.9
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-cccceeEEecccchhhHhhhcc-CCCEEEEcccc
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVTK-GVDHVFNLAAD 100 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~~~-~~d~vi~~a~~ 100 (374)
....++|+|-| -|-+|+++++.|.+.|.+|++.+.+........ ..+... .+.+ +++. .||+++-||..
T Consensus 36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~-----~~~~---~~~~~~cDIl~PcA~~ 106 (230)
T d1leha1 36 SLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADA-----VAPN---AIYGVTCDIFAPCALG 106 (230)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEE-----CCGG---GTTTCCCSEEEECSCS
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcc-----cCCc---ccccccccEecccccc
Confidence 35779999998 899999999999999999998876543221110 111111 1222 2333 89999999973
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=90.88 E-value=0.29 Score=40.77 Aligned_cols=36 Identities=22% Similarity=0.139 Sum_probs=31.2
Q ss_pred CCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCC
Q 017290 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWK 59 (374)
Q Consensus 23 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~ 59 (374)
....++|+|-| -|-+|+++++.|.+.|.+|++++-+
T Consensus 33 ~L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~ 68 (293)
T d1hwxa1 33 GFGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES 68 (293)
T ss_dssp SSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence 34678999998 7999999999999999999887643
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=90.65 E-value=0.37 Score=36.28 Aligned_cols=85 Identities=20% Similarity=0.209 Sum_probs=48.7
Q ss_pred CCeEEEEcCcchhHHH-HHHHHHhC-CCEEEEE-eCCCCcccccc-cccceeEEecccchhhHhhhccCCCEEEEccccc
Q 017290 26 KLRISVTGAGGFIASH-IARRLKSE-GHYIIAS-DWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADM 101 (374)
Q Consensus 26 ~~~ilItGatG~iG~~-l~~~L~~~-g~~V~~~-~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~ 101 (374)
.+||.|+| +|.+|+. .+..|.+. +.+|+++ ++++....... ..++. . .+.+..+.+++|+|+-+....
T Consensus 1 Kiri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~-----~--~~~~~~l~~~~D~V~I~tp~~ 72 (164)
T d1tlta1 1 KLRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIP-----Y--ADSLSSLAASCDAVFVHSSTA 72 (164)
T ss_dssp CEEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCC-----B--CSSHHHHHTTCSEEEECSCTT
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhccccc-----c--cccchhhhhhcccccccccch
Confidence 36899999 7999975 45666554 6777654 55554322211 11222 1 222344457899988765421
Q ss_pred CCcccccCCcceehhhhHHHHHHHHHHHHhCCCCeEE
Q 017290 102 GGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~i 138 (374)
....++..+.++|. +++
T Consensus 73 -------------------~h~~~~~~al~~gk-~V~ 89 (164)
T d1tlta1 73 -------------------SHFDVVSTLLNAGV-HVC 89 (164)
T ss_dssp -------------------HHHHHHHHHHHTTC-EEE
T ss_pred -------------------hccccccccccccc-eee
Confidence 13456667778884 544
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=90.55 E-value=0.22 Score=35.36 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=28.6
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHh---CCCEEEEEeCCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKS---EGHYIIASDWKKN 61 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~ 61 (374)
.+++++|.| +|++|-+++..|.+ +|.+|+++.|.+.
T Consensus 19 ~p~~v~ivG-gG~ig~E~A~~l~~l~~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 19 PPRRVLTVG-GGFISVEFAGIFNAYKPKDGQVTLCYRGEM 57 (117)
T ss_dssp CCSEEEEEC-SSHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred cCCeEEEEC-CcHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence 458999999 59999999976554 4678999988754
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=90.09 E-value=0.26 Score=34.83 Aligned_cols=38 Identities=18% Similarity=0.221 Sum_probs=30.5
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHh---CCCEEEEEeCCCCc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKS---EGHYIIASDWKKNE 62 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~ 62 (374)
..+++++|+| .|++|-+++..|.+ .|.+|+++.|.+.-
T Consensus 16 ~~p~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~~i 56 (117)
T d1feca2 16 EAPKRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGDMI 56 (117)
T ss_dssp SCCSEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred ccCCeEEEEC-CChHHHHHHHHhHhhcccccccceecccccc
Confidence 3458999999 79999999976554 48899999987653
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.86 E-value=0.21 Score=40.90 Aligned_cols=36 Identities=17% Similarity=0.181 Sum_probs=31.5
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCC-CEEEEEeCCCCc
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEG-HYIIASDWKKNE 62 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~ 62 (374)
+++|+|+| .|..|..++..|.+.| ++|.++.+++..
T Consensus 1 ~~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~~~ 37 (288)
T d3c96a1 1 PIDILIAG-AGIGGLSCALALHQAGIGKVTLLESSSEI 37 (288)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCCCC
Confidence 47899999 6999999999999999 599999987653
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.73 E-value=0.13 Score=42.81 Aligned_cols=34 Identities=12% Similarity=0.194 Sum_probs=30.7
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
.+|+|+| .|..|..++..|.+.|++|.++.+.+.
T Consensus 3 ~~V~IvG-aGp~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 3 TQVAIIG-AGPSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CCEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3799999 589999999999999999999998764
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.59 E-value=0.16 Score=40.65 Aligned_cols=33 Identities=18% Similarity=0.333 Sum_probs=30.2
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
.|+|+| +|.-|...+..|.++|++|.++.+++.
T Consensus 7 DviViG-aG~~Gl~~A~~La~~G~~V~vlE~~~~ 39 (297)
T d2bcgg1 7 DVIVLG-TGITECILSGLLSVDGKKVLHIDKQDH 39 (297)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 489999 899999999999999999999998864
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=89.32 E-value=0.029 Score=45.49 Aligned_cols=27 Identities=26% Similarity=0.443 Sum_probs=24.2
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEE
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYII 54 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~ 54 (374)
|||+|+| +|.+|..++.+|+++|++|+
T Consensus 1 mkV~VIG-aGi~GlstA~~L~~~G~~v~ 27 (246)
T d1kifa1 1 MRVVVIG-AGVIGLSTALCIHERYHSVL 27 (246)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHHTTTS
T ss_pred CEEEEEC-chHHHHHHHHHHHHCCCCce
Confidence 7899999 79999999999999998643
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=89.15 E-value=0.49 Score=35.88 Aligned_cols=30 Identities=23% Similarity=0.307 Sum_probs=26.4
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEEEEeC
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYIIASDW 58 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r 58 (374)
||.|-| =|.||+.+.+.+++++.+|.++.-
T Consensus 2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd 31 (169)
T d1dssg1 2 KIGING-FGRIGRLVLRAALEMGAQVVAVND 31 (169)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred eEEEEC-CcHHHHHHHHHHHhCCCcEEEECC
Confidence 688888 899999999999999988887764
|
| >d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Achromobacter xylosoxidans [TaxId: 85698]
Probab=88.97 E-value=1.7 Score=32.92 Aligned_cols=31 Identities=29% Similarity=0.383 Sum_probs=24.5
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC----CEEEEEeC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG----HYIIASDW 58 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g----~~V~~~~r 58 (374)
|||.|-| =|.||+.+.+.+++++ .+|.++.-
T Consensus 2 ikigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd 36 (173)
T d1obfo1 2 IRVAING-YGRIGRNILRAHYEGGKSHDIEIVAIND 36 (173)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEEC
T ss_pred eEEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcC
Confidence 6899998 8999999999998753 45665553
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=88.80 E-value=0.096 Score=40.05 Aligned_cols=70 Identities=17% Similarity=0.085 Sum_probs=41.2
Q ss_pred CCeEEEEcCcchhHH-HHHHHHHhC--C---CEEEEEeCCCCcccccc----------cccceeEEecccchhhHhhhcc
Q 017290 26 KLRISVTGAGGFIAS-HIARRLKSE--G---HYIIASDWKKNEHMTED----------MFCHEFHLVDLRVMDNCLKVTK 89 (374)
Q Consensus 26 ~~~ilItGatG~iG~-~l~~~L~~~--g---~~V~~~~r~~~~~~~~~----------~~~i~~~~~dl~~~~~~~~~~~ 89 (374)
..||.|.||++ +|. .++..|+.. . -+|..++.++.+..... ....++. ...+..++++
T Consensus 3 ~~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~d~~eal~ 76 (167)
T d1u8xx1 3 SFSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFA-----ATTDPEEAFT 76 (167)
T ss_dssp CEEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEE-----EESCHHHHHS
T ss_pred CceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceE-----ecCChhhccC
Confidence 46899999754 444 344555543 2 38999998765422100 0011111 1223566788
Q ss_pred CCCEEEEccccc
Q 017290 90 GVDHVFNLAADM 101 (374)
Q Consensus 90 ~~d~vi~~a~~~ 101 (374)
++|+||..++..
T Consensus 77 ~AD~Vvitag~~ 88 (167)
T d1u8xx1 77 DVDFVMAHIRVG 88 (167)
T ss_dssp SCSEEEECCCTT
T ss_pred CCCEEEECCCcC
Confidence 999999999864
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=88.76 E-value=0.21 Score=41.81 Aligned_cols=33 Identities=27% Similarity=0.451 Sum_probs=29.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH-YIIASDWKK 60 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 60 (374)
.+|+|+| +|.+|..++.+|.++|. +|+++.++.
T Consensus 2 ~dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 2 PRIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CCEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 3699999 69999999999999995 799999874
|
| >d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=88.55 E-value=2.1 Score=32.31 Aligned_cols=30 Identities=17% Similarity=0.320 Sum_probs=24.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCC---CEEEEEe
Q 017290 27 LRISVTGAGGFIASHIARRLKSEG---HYIIASD 57 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g---~~V~~~~ 57 (374)
|||.|-| =|.||+.+.+.++++. .+|.++.
T Consensus 1 ikIgING-fGRIGR~v~R~~~~~~~~~i~ivaIN 33 (172)
T d1rm4a1 1 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVIN 33 (172)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHCSSCSEEEEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEEc
Confidence 5899998 8999999999998753 4666654
|
| >d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Trypanosoma cruzi [TaxId: 5693]
Probab=88.35 E-value=2.1 Score=32.85 Aligned_cols=25 Identities=20% Similarity=0.404 Sum_probs=22.0
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG 50 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g 50 (374)
|+|||.|-| =|.||+.+.+.+++++
T Consensus 1 M~ikigING-FGRIGR~vlR~~~~~~ 25 (190)
T d1k3ta1 1 MPIKVGING-FGRIGRMVFQALCEDG 25 (190)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHHTT
T ss_pred CCeEEEEEC-CChHHHHHHHHHHHcC
Confidence 357999999 8999999999998864
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=88.34 E-value=0.24 Score=39.99 Aligned_cols=34 Identities=24% Similarity=0.370 Sum_probs=29.9
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC-EEEEEeCCCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH-YIIASDWKKN 61 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~ 61 (374)
++|+|+| +|.-|...+..|.++|+ +|+++.+++.
T Consensus 1 P~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~~ 35 (347)
T d1b5qa1 1 PRVIVVG-AGMSGISAAKRLSEAGITDLLILEATDH 35 (347)
T ss_dssp CCEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred CCEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence 4799999 79999999999999996 7999988754
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=88.26 E-value=0.24 Score=40.78 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=29.7
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
.|+|+| +|..|..++.+|.++|++|+++.+...
T Consensus 5 DvvIIG-aGi~Gls~A~~La~~G~~V~viE~~~~ 37 (281)
T d2gf3a1 5 DVIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (281)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 489998 799999999999999999999998643
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.15 E-value=0.32 Score=40.96 Aligned_cols=36 Identities=19% Similarity=0.268 Sum_probs=31.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
+..||+|+| +|.-|-..+.+|.++|++|+++-.+..
T Consensus 4 ~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~~r 39 (449)
T d2dw4a2 4 KTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEARDR 39 (449)
T ss_dssp CCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 457899999 799999999999999999999976543
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.09 E-value=0.33 Score=35.43 Aligned_cols=36 Identities=31% Similarity=0.405 Sum_probs=29.7
Q ss_pred CCeEEEEcCcchhHHHHHHHHHh----CCCEEEEEeCCCCc
Q 017290 26 KLRISVTGAGGFIASHIARRLKS----EGHYIIASDWKKNE 62 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~ 62 (374)
.++|+|.| .|++|-+++..|.. .|.+|+++.+.+..
T Consensus 37 ~k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~ 76 (137)
T d1m6ia2 37 VKSITIIG-GGFLGSELACALGRKARALGTEVIQLFPEKGN 76 (137)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSSST
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEecccccC
Confidence 47899998 69999999998853 48999999887653
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=88.06 E-value=0.16 Score=39.13 Aligned_cols=32 Identities=19% Similarity=0.253 Sum_probs=26.1
Q ss_pred CCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeC
Q 017290 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDW 58 (374)
Q Consensus 26 ~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r 58 (374)
..+|+|+| +|++|-+++..|.+.|++|.++.+
T Consensus 3 ~a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~ 34 (183)
T d1d7ya1 3 KAPVVVLG-AGLASVSFVAELRQAGYQGLITVV 34 (183)
T ss_dssp CSSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEE
T ss_pred CCCEEEEC-ccHHHHHHHHHHHhcCCceEEEEE
Confidence 35699999 799999999999999877655443
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=87.98 E-value=0.27 Score=36.91 Aligned_cols=32 Identities=16% Similarity=0.220 Sum_probs=27.2
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
||+|+| .|++|-+++..|. ++.+|+++.+.+.
T Consensus 2 rVvIIG-gG~~G~e~A~~l~-~~~~Vtvv~~~~~ 33 (167)
T d1xhca1 2 KVVIVG-NGPGGFELAKQLS-QTYEVTVIDKEPV 33 (167)
T ss_dssp EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSSSS
T ss_pred eEEEEC-CcHHHHHHHHHHH-cCCCEEEEecccc
Confidence 789999 6999999999985 5789999987653
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=87.56 E-value=0.36 Score=36.47 Aligned_cols=83 Identities=19% Similarity=0.100 Sum_probs=46.1
Q ss_pred CeEEEEcCcchhHHH-HHHHHHhC-CCEEEEEeCCCCcccccc-cccceeEEecccchhhHhhhccCCCEEEEcccccCC
Q 017290 27 LRISVTGAGGFIASH-IARRLKSE-GHYIIASDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGG 103 (374)
Q Consensus 27 ~~ilItGatG~iG~~-l~~~L~~~-g~~V~~~~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~~~~~ 103 (374)
+||.|+| +|.+|+. .+..|.+. +.++.++++++....... ..++..... |.+++.+ .++|+|+-+....
T Consensus 2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~---~~~~ll~--~~iD~V~I~tp~~-- 73 (167)
T d1xeaa1 2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCT---DYRDVLQ--YGVDAVMIHAATD-- 73 (167)
T ss_dssp EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCS---STTGGGG--GCCSEEEECSCGG--
T ss_pred eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccc---cHHHhcc--cccceeccccccc--
Confidence 6899999 6888865 56666555 567777776654322211 111221222 2222222 3789988765421
Q ss_pred cccccCCcceehhhhHHHHHHHHHHHHhCCC
Q 017290 104 MGFIQSNHSVIMYNNTMISFNMLEASRISGV 134 (374)
Q Consensus 104 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~ 134 (374)
....++..|.+.|.
T Consensus 74 -----------------~H~~~~~~al~~gk 87 (167)
T d1xeaa1 74 -----------------VHSTLAAFFLHLGI 87 (167)
T ss_dssp -----------------GHHHHHHHHHHTTC
T ss_pred -----------------cccccccccccccc
Confidence 13456667777785
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=87.43 E-value=0.27 Score=37.38 Aligned_cols=66 Identities=14% Similarity=0.137 Sum_probs=51.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccc-cccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
+.++|.|+| -|..|++-+..|...|.+|++--|..+..+... ..++++ -.+.++.+..|+|..+..
T Consensus 15 k~k~IaViG-YGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v--------~~~~eA~~~aDiim~L~P 81 (182)
T d1np3a2 15 QGKKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKV--------ADVKTAVAAADVVMILTP 81 (182)
T ss_dssp HTSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEE--------ECHHHHHHTCSEEEECSC
T ss_pred CCCEEEEEe-eCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhcccc--------ccHHHHhhhcCeeeeecc
Confidence 568999999 999999999999999999999888876544332 223333 345667789999999985
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=87.31 E-value=0.18 Score=44.26 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=24.9
Q ss_pred CeEEEE---------cCcchhHHHHHHHHHhCCCEEEEEeCC
Q 017290 27 LRISVT---------GAGGFIASHIARRLKSEGHYIIASDWK 59 (374)
Q Consensus 27 ~~ilIt---------GatG~iG~~l~~~L~~~g~~V~~~~r~ 59 (374)
||||++ ||-|-.-..|+++|.+.||+|++++..
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~ 42 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS 42 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 677774 444555577899999999999998743
|
| >d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]
Probab=87.20 E-value=2.3 Score=32.07 Aligned_cols=30 Identities=17% Similarity=0.252 Sum_probs=25.3
Q ss_pred eEEEEcCcchhHHHHHHHHHhC-CCEEEEEeC
Q 017290 28 RISVTGAGGFIASHIARRLKSE-GHYIIASDW 58 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r 58 (374)
||.|-| =|.||+.+.+.++++ ..+|.++.-
T Consensus 3 kIgING-fGRIGR~v~R~~l~~~~~~ivaINd 33 (171)
T d3cmco1 3 KVGING-FGRIGRNVFRAALKNPDIEVVAVND 33 (171)
T ss_dssp EEEEES-CSHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred EEEEEC-CCHHHHHHHHHHhhCCCcEEEEEcC
Confidence 688888 899999999999987 467777764
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=87.19 E-value=0.19 Score=38.44 Aligned_cols=111 Identities=10% Similarity=0.047 Sum_probs=59.3
Q ss_pred CeEEEEcCc-chhHHHHHHHHHhCC----CEEEEEeCCCCccccc--c--------cccceeEEecccchhhHhhhccCC
Q 017290 27 LRISVTGAG-GFIASHIARRLKSEG----HYIIASDWKKNEHMTE--D--------MFCHEFHLVDLRVMDNCLKVTKGV 91 (374)
Q Consensus 27 ~~ilItGat-G~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~--~--------~~~i~~~~~dl~~~~~~~~~~~~~ 91 (374)
|||.|.||. .+.+..++..++... -++..++.++...... . ..+..+.... ..+..+.++++
T Consensus 2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~---~td~~~al~ga 78 (169)
T d1s6ya1 2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHL---TLDRRRALDGA 78 (169)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEE---ESCHHHHHTTC
T ss_pred cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeee---cCCchhhcCCC
Confidence 789999963 344455555444432 3888888876431100 0 0011121122 22345567899
Q ss_pred CEEEEcccccCCcccccCCc-----------------ceehhhhHHHHHHHHHHHHhCCCCeEEEe
Q 017290 92 DHVFNLAADMGGMGFIQSNH-----------------SVIMYNNTMISFNMLEASRISGVKRFFYA 140 (374)
Q Consensus 92 d~vi~~a~~~~~~~~~~~~~-----------------~~~~~~n~~~~~~ll~a~~~~~~~~~i~~ 140 (374)
|+||..++......+...+. -.....|+...+.+++.+++...+-+++.
T Consensus 79 DvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~ 144 (169)
T d1s6ya1 79 DFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLIN 144 (169)
T ss_dssp SEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEE
Confidence 99999998543211111100 00122477777888888888876644444
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=86.98 E-value=0.58 Score=35.81 Aligned_cols=68 Identities=21% Similarity=0.162 Sum_probs=37.8
Q ss_pred CCCeEEEEcCcchhHHH-HHHHHHhCC--CEEEEE-eCCCCcccccc-cccceeEEecccchhhHhhhcc--CCCEEEEc
Q 017290 25 EKLRISVTGAGGFIASH-IARRLKSEG--HYIIAS-DWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVTK--GVDHVFNL 97 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~-l~~~L~~~g--~~V~~~-~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~ 97 (374)
+++||.|+| +|.+|+. .+..+.+.+ .+|.++ ++++++..... ..+...+. ++++++++ ++|+|+-+
T Consensus 2 kkirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~------~~~~ell~~~~id~v~I~ 74 (181)
T d1zh8a1 2 RKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF------DSYEELLESGLVDAVDLT 74 (181)
T ss_dssp CCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE------SCHHHHHHSSCCSEEEEC
T ss_pred CCcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee------eeeeccccccccceeecc
Confidence 456899999 7999986 466666543 477654 55443221111 11222222 23444553 68988876
Q ss_pred cc
Q 017290 98 AA 99 (374)
Q Consensus 98 a~ 99 (374)
..
T Consensus 75 tp 76 (181)
T d1zh8a1 75 LP 76 (181)
T ss_dssp CC
T ss_pred cc
Confidence 64
|
| >d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermotoga maritima [TaxId: 2336]
Probab=86.96 E-value=2.4 Score=31.82 Aligned_cols=29 Identities=21% Similarity=0.328 Sum_probs=23.9
Q ss_pred eEEEEcCcchhHHHHHHHHHhC---CCEEEEEe
Q 017290 28 RISVTGAGGFIASHIARRLKSE---GHYIIASD 57 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~---g~~V~~~~ 57 (374)
||.|-| =|.||+.+.+.++++ +.+|..+.
T Consensus 2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaIN 33 (169)
T d1hdgo1 2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAIN 33 (169)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred EEEEEC-CChHHHHHHHHHHhccCCCEEEEEec
Confidence 688888 899999999999974 36777765
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=86.61 E-value=0.43 Score=38.00 Aligned_cols=108 Identities=15% Similarity=0.130 Sum_probs=56.3
Q ss_pred CCCeEEEEcCcchhHH-HHHHHHHhC-CCEEEE-EeCCCCcccccc-cccceeEEecccchhhHhhhcc--CCCEEEEcc
Q 017290 25 EKLRISVTGAGGFIAS-HIARRLKSE-GHYIIA-SDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLA 98 (374)
Q Consensus 25 ~~~~ilItGatG~iG~-~l~~~L~~~-g~~V~~-~~r~~~~~~~~~-~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a 98 (374)
+.-+|.|+| +|.+|+ +++..+... +.+|++ +++++.+..... ..++... .+...+++.++++ ++|+|+-+.
T Consensus 32 ~~iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~--~~~~~~d~~ell~~~~iD~V~I~t 108 (221)
T d1h6da1 32 RRFGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPR--KIYDYSNFDKIAKDPKIDAVYIIL 108 (221)
T ss_dssp CCEEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGG--GEECSSSGGGGGGCTTCCEEEECS
T ss_pred CCEEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccc--cccccCchhhhcccccceeeeecc
Confidence 345899999 699996 566666664 667774 455543321110 0011100 0011123444554 688888776
Q ss_pred cccCCccc----ccCC----cceehhhhHHHHHHHHHHHHhCCCC
Q 017290 99 ADMGGMGF----IQSN----HSVIMYNNTMISFNMLEASRISGVK 135 (374)
Q Consensus 99 ~~~~~~~~----~~~~----~~~~~~~n~~~~~~ll~a~~~~~~~ 135 (374)
......+. .+.. -+.-...|..-...|++++++.++.
T Consensus 109 p~~~H~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~~~ 153 (221)
T d1h6da1 109 PNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKK 153 (221)
T ss_dssp CGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCC
T ss_pred chhhhhhHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcCCc
Confidence 54321110 0000 0112335777788888888888863
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=86.61 E-value=0.03 Score=42.23 Aligned_cols=63 Identities=11% Similarity=0.010 Sum_probs=34.2
Q ss_pred EEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCCcccccccccceeEEecccchhhHhhhccCCCEEEEccc
Q 017290 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAA 99 (374)
Q Consensus 29 ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~~~d~vi~~a~ 99 (374)
|-++| +|.+|+++++.|.+.++.+.+.+|++++.......... ... ...++++.+|+||-|..
T Consensus 2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~-~~~------~~~~~~~~~DiVil~v~ 64 (153)
T d2i76a2 2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGG-KAA------TLEKHPELNGVVFVIVP 64 (153)
T ss_dssp CEEES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCC-CCC------SSCCCCC---CEEECSC
T ss_pred EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccc-ccc------chhhhhccCcEEEEecc
Confidence 34566 89999999998755444446888876654333221111 111 23346678899998864
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=85.78 E-value=0.37 Score=40.38 Aligned_cols=37 Identities=22% Similarity=0.322 Sum_probs=32.6
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
++.-+|+|+| .|+.|-.++..|++.|.+|.++.+.+.
T Consensus 5 ~~~~dV~IIG-AG~sGl~~a~~L~~~G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 5 PEEVDVLVVG-AGFSGLYALYRLRELGRSVHVIETAGD 41 (298)
T ss_dssp CSEEEEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCEEEEC-ccHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 3456799999 699999999999999999999998765
|
| >d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain species: Thermotoga maritima [TaxId: 2336]
Probab=84.83 E-value=0.9 Score=30.28 Aligned_cols=32 Identities=16% Similarity=0.173 Sum_probs=26.8
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWK 59 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~ 59 (374)
|||||+| +|-=-.+|+..|.+..++|++.--+
T Consensus 1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pGN 32 (90)
T d1vkza2 1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPGN 32 (90)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecCC
Confidence 8999999 6777889999998888999987543
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=84.58 E-value=0.52 Score=37.42 Aligned_cols=35 Identities=17% Similarity=0.060 Sum_probs=30.4
Q ss_pred CeEEEEcCcchhHHHHHHHHHhC--CCEEEEEeCCCCc
Q 017290 27 LRISVTGAGGFIASHIARRLKSE--GHYIIASDWKKNE 62 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~ 62 (374)
+||+|+| +|.-|...+..|+++ |++|+++.+.+..
T Consensus 2 ~kv~iIG-aGpaGl~aA~~L~~~~~~~~V~v~e~~~~~ 38 (230)
T d1cjca2 2 PQICVVG-SGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 38 (230)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CeEEEEC-ccHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 5899999 799999999999875 7999999887653
|
| >d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=84.32 E-value=2.8 Score=31.35 Aligned_cols=30 Identities=17% Similarity=0.190 Sum_probs=24.8
Q ss_pred eEEEEcCcchhHHHHHHHHHhC-CCEEEEEeC
Q 017290 28 RISVTGAGGFIASHIARRLKSE-GHYIIASDW 58 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r 58 (374)
||.|-| =|.||+.+.+.++++ ..+|.++.-
T Consensus 2 kigING-fGRIGR~v~R~~~~~~~~~iv~INd 32 (166)
T d2b4ro1 2 KLGING-FGRIGRLVFRAAFGRKDIEVVAIND 32 (166)
T ss_dssp EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred eEEEEC-CCHHHHHHHHHHhhCCCcEEEEECC
Confidence 678887 899999999999987 567777753
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=83.98 E-value=0.55 Score=36.00 Aligned_cols=33 Identities=24% Similarity=0.285 Sum_probs=26.3
Q ss_pred CeEEEEcCcchhHHHHHHHHHhC-CCEEEEE-eCCC
Q 017290 27 LRISVTGAGGFIASHIARRLKSE-GHYIIAS-DWKK 60 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~ 60 (374)
+||.|+| +|.+|+..++.|... +.+|+++ ++++
T Consensus 2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~ 36 (184)
T d1ydwa1 2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSL 36 (184)
T ss_dssp EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSH
T ss_pred eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCc
Confidence 6899999 689999999999876 6788755 5554
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=83.77 E-value=0.46 Score=36.05 Aligned_cols=102 Identities=14% Similarity=0.117 Sum_probs=53.8
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCC--CEEEEEeCCCCcccccccccceeEEecccchhhHhhhcc--CCCEEEEccc
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK--GVDHVFNLAA 99 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~i~~~~~dl~~~~~~~~~~~--~~d~vi~~a~ 99 (374)
...++|+|+| +|.+|+..++.|.+.. ..+.+++....+... ...... .. + +.++++ ++|+|+-+..
T Consensus 5 ~~k~kv~iIG-~G~~g~~h~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~---~---~~e~l~~~~iD~V~I~tp 74 (172)
T d1lc0a1 5 SGKFGVVVVG-VGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELG-SLDEVR--QI---S---LEDALRSQEIDVAYICSE 74 (172)
T ss_dssp CCSEEEEEEC-CSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCC-EETTEE--BC---C---HHHHHHCSSEEEEEECSC
T ss_pred CCCcEEEEEc-CCHHHHHHHHHHHhCCCCcEEEEEeccchHHHH-HhhccC--cC---C---HHHHHhCCCcchhhhccc
Confidence 3557899998 6999999988887642 223333322221111 111111 11 2 344443 6788877765
Q ss_pred ccCCccc----ccCC----cceehhhhHHHHHHHHHHHHhCCCC
Q 017290 100 DMGGMGF----IQSN----HSVIMYNNTMISFNMLEASRISGVK 135 (374)
Q Consensus 100 ~~~~~~~----~~~~----~~~~~~~n~~~~~~ll~a~~~~~~~ 135 (374)
.....+. .+.. -+.-...|+.-...+++++++.++.
T Consensus 75 ~~~H~~~~~~al~~gk~V~~EKP~a~~~~e~~~l~~~a~~~~~~ 118 (172)
T d1lc0a1 75 SSSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRV 118 (172)
T ss_dssp GGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCC
T ss_pred ccccccccccccccchhhhcCCCccccHHHHHHHHHHHHHcCCe
Confidence 3321110 0000 0112345777788899999998853
|
| >d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Thermotoga maritima [TaxId: 2336]
Probab=83.59 E-value=2.6 Score=32.42 Aligned_cols=94 Identities=19% Similarity=0.147 Sum_probs=60.1
Q ss_pred CeEEEEcCcchhHHHHHHHHHhCCC---EEEEEeCCCCcccccccccceeEEec-------------------ccchhhH
Q 017290 27 LRISVTGAGGFIASHIARRLKSEGH---YIIASDWKKNEHMTEDMFCHEFHLVD-------------------LRVMDNC 84 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~i~~~~~d-------------------l~~~~~~ 84 (374)
+||.|+| -|.-|..++..|.+.+. +.++++......... .....+..+. ..+.+.+
T Consensus 1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~-~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~~~I 78 (194)
T d1w5fa1 1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEAS-NADVKIQIGENITRGLGAGGRPEIGEQAALESEEKI 78 (194)
T ss_dssp CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHTC-CCSEEEECCTTTTTTSCCTTCHHHHHHHHHHTHHHH
T ss_pred CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCCHHHHhcC-CcceEEecccccCCCcccccCchhhHhHHHHHHHHH
Confidence 5789998 78899999999988763 455665443221110 0111222221 1235677
Q ss_pred hhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC
Q 017290 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135 (374)
Q Consensus 85 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~ 135 (374)
.+.++++|.||-+|+.-++. -.-++-.+.+.+++.++.
T Consensus 79 ~~~l~~~d~vfi~AGlGGgT-------------GtgaapviA~~ake~g~l 116 (194)
T d1w5fa1 79 REVLQDTHMVFITAGFGGGT-------------GTGASPVIAKIAKEMGIL 116 (194)
T ss_dssp HHHTTTCSEEEEEEETTSSH-------------HHHHHHHHHHHHHHTTCE
T ss_pred HHHhcCCCeEEEEEecCCCc-------------ccchHHHHHHHHHHcCCc
Confidence 88888999999999975532 234456678899999863
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=83.45 E-value=1.3 Score=35.45 Aligned_cols=37 Identities=19% Similarity=0.162 Sum_probs=30.6
Q ss_pred CCCCCCCeEEEEcCcchhHHHHHHHHHh-CCCEEEEEeC
Q 017290 21 YWPSEKLRISVTGAGGFIASHIARRLKS-EGHYIIASDW 58 (374)
Q Consensus 21 ~~~~~~~~ilItGatG~iG~~l~~~L~~-~g~~V~~~~r 58 (374)
....+.++|.|-| .|-+|+++++.|.+ .|..|++++-
T Consensus 26 ~~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd 63 (234)
T d1b26a1 26 GIDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD 63 (234)
T ss_dssp TCCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred CCCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence 3456789999998 99999999999965 5999887763
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=83.43 E-value=0.64 Score=39.16 Aligned_cols=33 Identities=18% Similarity=0.217 Sum_probs=23.7
Q ss_pred CeEEEEcC-cc-hh--HHHHHHHHHhCCCEEEEEeCC
Q 017290 27 LRISVTGA-GG-FI--ASHIARRLKSEGHYIIASDWK 59 (374)
Q Consensus 27 ~~ilItGa-tG-~i--G~~l~~~L~~~g~~V~~~~r~ 59 (374)
|||||++| || -+ +.+|+++|.++||+|..++..
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 67887764 43 22 335889999999999887754
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.89 E-value=0.61 Score=39.30 Aligned_cols=33 Identities=21% Similarity=0.405 Sum_probs=29.4
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
.|+|+| +|.-|-..+..|.++|++|+++.+++.
T Consensus 1 DViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~~ 33 (383)
T d2v5za1 1 DVVVVG-GGISGMAAAKLLHDSGLNVVVLEARDR 33 (383)
T ss_dssp SEEEEC-CBHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CEEEEC-CCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 378998 799999999999999999999987653
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=82.88 E-value=2.8 Score=33.48 Aligned_cols=35 Identities=17% Similarity=0.222 Sum_probs=29.2
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeCC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSE-GHYIIASDWK 59 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~ 59 (374)
.+.++|+|-| -|-+|+++++.|.+. |..|+++.-.
T Consensus 30 l~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD~ 65 (239)
T d1gtma1 30 LKGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSDS 65 (239)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHhcCcceeecccc
Confidence 5789999998 699999999999864 8888877543
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=82.66 E-value=0.55 Score=38.23 Aligned_cols=41 Identities=15% Similarity=0.067 Sum_probs=33.6
Q ss_pred ccCCCCCCCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeC
Q 017290 17 EREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDW 58 (374)
Q Consensus 17 ~~~~~~~~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r 58 (374)
.+......+.++|.|-| .|-+|+++++.|.+.|.+|++++-
T Consensus 27 ~~~~~~~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD 67 (255)
T d1bgva1 27 MKHENDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG 67 (255)
T ss_dssp HHHTTCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHhCCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence 33334456789999999 799999999999999999987753
|
| >d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Human(Homo sapiens), liver isoform [TaxId: 9606]
Probab=82.33 E-value=2.9 Score=31.37 Aligned_cols=31 Identities=23% Similarity=0.242 Sum_probs=26.1
Q ss_pred CeEEEEcCcchhHHHHHHHHHhC-CCEEEEEeC
Q 017290 27 LRISVTGAGGFIASHIARRLKSE-GHYIIASDW 58 (374)
Q Consensus 27 ~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r 58 (374)
.||.|-| =|.||+.+.+.++++ ..+|.++.-
T Consensus 2 ikIgING-FGRIGR~v~R~~~~~~~~~ivaINd 33 (169)
T d1u8fo1 2 VKVGVNG-FGRIGRLVTRAAFNSGKVDIVAIND 33 (169)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred cEEEEEC-CcHHHHHHHHHHHHCCCcEEEEecC
Confidence 5799998 899999999999986 578877754
|
| >d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=82.32 E-value=3.2 Score=32.32 Aligned_cols=96 Identities=21% Similarity=0.178 Sum_probs=60.5
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCCC---EEEEEeCCCCcccccccccceeEEec-------------------ccchh
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEGH---YIIASDWKKNEHMTEDMFCHEFHLVD-------------------LRVMD 82 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~i~~~~~d-------------------l~~~~ 82 (374)
...||.|+| -|.-|..++..|.+.+. +.++++.......... ....+..+. ..+.+
T Consensus 14 ~~~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~-~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~~~ 91 (209)
T d2vapa1 14 TKAKITVVG-CGGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTK-ADKKILIGKKLTRGLGAGGNPKIGEEAAKESAE 91 (209)
T ss_dssp TCCCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSC-CSEEEECCTTTTTTBCCTTCHHHHHHHHHHTHH
T ss_pred cCCcEEEEE-eCChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcCC-cchhcccccccccccccccchHHHHHHHHHHHH
Confidence 347899998 78899999999998864 4455554322111110 011122221 12345
Q ss_pred hHhhhccCCCEEEEcccccCCcccccCCcceehhhhHHHHHHHHHHHHhCCCC
Q 017290 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135 (374)
Q Consensus 83 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~ 135 (374)
.+.+.++++|.||-+|+.-++. -..++-.+.+.+++.++.
T Consensus 92 ~I~~~l~~~d~vfi~AGlGGGT-------------Gsgaapvia~~ake~g~l 131 (209)
T d2vapa1 92 EIKAAIQDSDMVFITCGLGGGT-------------GTGSAPVVAEISKKIGAL 131 (209)
T ss_dssp HHHHHHTTCSEEEEEEETTSSH-------------HHHHHHHHHHHHHHTTCE
T ss_pred HHHHhccCCCEEEEEEeCCCCc-------------cccHHHHHHHHHHHcCCc
Confidence 7778888999999999975532 233455678899999863
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=82.13 E-value=0.6 Score=39.97 Aligned_cols=31 Identities=26% Similarity=0.253 Sum_probs=28.4
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEEEEeCC
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWK 59 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~ 59 (374)
.|+|+| +|+-|..++.+|.++|++|.++-+-
T Consensus 4 ~VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG 34 (367)
T d1n4wa1 4 PAVVIG-TGYGAAVSALRLGEAGVQTLMLEMG 34 (367)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence 478998 8999999999999999999999874
|
| >d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Homoserine dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=82.07 E-value=2.7 Score=31.47 Aligned_cols=33 Identities=15% Similarity=0.231 Sum_probs=25.2
Q ss_pred CCCeEEEEcCcchhHHHHHHHHHhCC--C--EEEEEeC
Q 017290 25 EKLRISVTGAGGFIASHIARRLKSEG--H--YIIASDW 58 (374)
Q Consensus 25 ~~~~ilItGatG~iG~~l~~~L~~~g--~--~V~~~~r 58 (374)
++.+|+|+| .|-+|+.+++.|+++. . +|.++..
T Consensus 3 k~i~I~l~G-~G~VG~~l~~~l~~~~~~l~~~v~~i~~ 39 (168)
T d1ebfa1 3 KVVNVAVIG-AGVVGSAFLDQLLAMKSTITYNLVLLAE 39 (168)
T ss_dssp SEEEEEEEC-CSHHHHHHHHHHHHCCCSSEEEEEEEEC
T ss_pred CEEEEEEEe-CCHHHHHHHHHHHHhHHHhhhheEEEEE
Confidence 456899997 9999999999999864 2 4545443
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=80.40 E-value=1 Score=35.98 Aligned_cols=33 Identities=24% Similarity=0.246 Sum_probs=30.0
Q ss_pred eEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 28 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
.|+|+| +|..|...+..|.++|++|.++.+.+.
T Consensus 4 DViIIG-aG~aGl~aA~~la~~G~~V~liEk~~~ 36 (251)
T d2i0za1 4 DVIVIG-GGPSGLMAAIGAAEEGANVLLLDKGNK 36 (251)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 589999 699999999999999999999998764
|
| >d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Escherichia coli [TaxId: 562]
Probab=80.05 E-value=7.3 Score=27.00 Aligned_cols=38 Identities=8% Similarity=0.103 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCcchhHHHHHHHHHhCCCEEEEEeCCCC
Q 017290 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKN 61 (374)
Q Consensus 24 ~~~~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 61 (374)
++..||+|-|-||..|+.-++..++-|-+|.+-....+
T Consensus 4 ~k~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgk 41 (119)
T d2nu7a1 4 DKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGK 41 (119)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTC
T ss_pred cCCCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCC
Confidence 45678999999999999999999999998876665443
|