Citrus Sinensis ID: 017318
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 373 | 2.2.26 [Sep-21-2011] | |||||||
| P43295 | 361 | Probable cysteine protein | yes | no | 0.943 | 0.975 | 0.754 | 1e-163 | |
| P43296 | 368 | Cysteine proteinase RD19a | no | no | 0.903 | 0.915 | 0.775 | 1e-163 | |
| P25804 | 363 | Cysteine proteinase 15A O | N/A | no | 0.922 | 0.947 | 0.715 | 1e-153 | |
| Q10716 | 371 | Cysteine proteinase 1 OS= | N/A | no | 0.898 | 0.902 | 0.704 | 1e-144 | |
| P04988 | 343 | Cysteine proteinase 1 OS= | yes | no | 0.825 | 0.897 | 0.467 | 1e-75 | |
| Q26534 | 319 | Cathepsin L OS=Schistosom | N/A | no | 0.785 | 0.918 | 0.425 | 1e-65 | |
| Q9VN93 | 614 | Putative cysteine protein | yes | no | 0.841 | 0.511 | 0.407 | 3e-65 | |
| P14658 | 450 | Cysteine proteinase OS=Tr | N/A | no | 0.772 | 0.64 | 0.433 | 4e-63 | |
| P25779 | 467 | Cruzipain OS=Trypanosoma | N/A | no | 0.785 | 0.627 | 0.420 | 3e-60 | |
| P04989 | 376 | Cysteine proteinase 2 OS= | no | no | 0.801 | 0.795 | 0.404 | 4e-60 |
| >sp|P43295|A494_ARATH Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 575 bits (1481), Expect = e-163, Method: Compositional matrix adjust.
Identities = 277/367 (75%), Positives = 314/367 (85%), Gaps = 15/367 (4%)
Query: 7 VLFLVSLV-VFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKK 65
VLF VSL+ VF +VS + D D LIRQV D T +L +E HF+LFKK
Sbjct: 7 VLFSVSLIFVFVSVS---VCGDEDVLIRQVVD----------ETEPKVLSSEDHFTLFKK 53
Query: 66 KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
KF K Y S EEH +RF++FKANL RA RHQK+DPSA HG+TQFSDLT +EFRR +LG++
Sbjct: 54 KFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVKG 113
Query: 126 KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLAT 185
+LPKDA+QAPILPT +LP +FDWR++GAV PVK+QGSCGSCWSFSTTGALEGA+FLAT
Sbjct: 114 GFKLPKDANQAPILPTQNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLAT 173
Query: 186 GKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 245
GKLVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEYTLK GGLMRE+DYPYTGTD
Sbjct: 174 GKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTD 233
Query: 246 RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYI 305
G +CK D+SKI ASV+NFSVVS++EDQIAANL+KNGPLAVAINA YMQTYIGGVSCPYI
Sbjct: 234 -GGSCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGGVSCPYI 292
Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 365
CSRRL+HGVLLVGYGSAG++ RLKEKPYWIIKNSWGESWGENG+YKIC+GRN+CGVDS+
Sbjct: 293 CSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSL 352
Query: 366 VSTVAAA 372
VSTVAA
Sbjct: 353 VSTVAAT 359
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Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: - |
| >sp|P43296|RD19A_ARATH Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1 | Back alignment and function description |
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| >sp|P25804|CYSP_PEA Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1 | Back alignment and function description |
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| >sp|Q10716|CYSP1_MAIZE Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1 | Back alignment and function description |
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| >sp|P04988|CYSP1_DICDI Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2 | Back alignment and function description |
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| >sp|Q26534|CATL_SCHMA Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9VN93|CPR1_DROME Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2 | Back alignment and function description |
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| >sp|P14658|CYSP_TRYBB Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1 | Back alignment and function description |
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| >sp|P25779|CYSP_TRYCR Cruzipain OS=Trypanosoma cruzi PE=1 SV=1 | Back alignment and function description |
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| >sp|P04989|CYSP2_DICDI Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 373 | ||||||
| 255543801 | 373 | cysteine protease, putative [Ricinus com | 0.957 | 0.957 | 0.841 | 1e-176 | |
| 118481169 | 368 | unknown [Populus trichocarpa] | 0.924 | 0.937 | 0.838 | 1e-176 | |
| 224105327 | 368 | predicted protein [Populus trichocarpa] | 0.924 | 0.937 | 0.836 | 1e-175 | |
| 60396844 | 374 | cysteine proteinase [Populus tomentosa] | 0.924 | 0.922 | 0.836 | 1e-175 | |
| 224077886 | 368 | predicted protein [Populus trichocarpa] | 0.930 | 0.942 | 0.825 | 1e-174 | |
| 57282617 | 373 | putative papain-like cysteine proteinase | 0.946 | 0.946 | 0.802 | 1e-173 | |
| 7381219 | 368 | papain-like cysteine proteinase isoform | 0.965 | 0.978 | 0.771 | 1e-170 | |
| 7211741 | 368 | papain-like cysteine proteinase isoform | 0.965 | 0.978 | 0.771 | 1e-170 | |
| 449464688 | 377 | PREDICTED: cysteine proteinase RD19a-lik | 0.965 | 0.954 | 0.786 | 1e-169 | |
| 7211745 | 366 | papain-like cysteine proteinase isoform | 0.898 | 0.915 | 0.812 | 1e-169 |
| >gi|255543801|ref|XP_002512963.1| cysteine protease, putative [Ricinus communis] gi|223547974|gb|EEF49466.1| cysteine protease, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 308/366 (84%), Positives = 335/366 (91%), Gaps = 9/366 (2%)
Query: 8 LFLVSLVVF-SAVSSGTLIDD-VDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKK 65
F++S ++F SAV++ TL D D LIRQVTDG DE S N +LLGAEHHFSLFKK
Sbjct: 9 FFVISSILFVSAVTAETLTTDGEDPLIRQVTDGQDE-----SSANPNLLGAEHHFSLFKK 63
Query: 66 KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
KF K YASQEEHD+RF IFK+NLRRA RHQKLDP+ATHG+TQFSDLT +EFRR +LGLRR
Sbjct: 64 KFKKTYASQEEHDYRFKIFKSNLRRAERHQKLDPTATHGVTQFSDLTHSEFRRQFLGLRR 123
Query: 126 KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLAT 185
LRLPKDA++AP+LPTNDLPADFDWREKGAV VK+QGSCGSCWSFSTTGALEGAN+LAT
Sbjct: 124 -LRLPKDANEAPMLPTNDLPADFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGANYLAT 182
Query: 186 GKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 245
GKLVSLSEQQLVDCDHECDP E G+CDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD
Sbjct: 183 GKLVSLSEQQLVDCDHECDPAEEGACDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 242
Query: 246 RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYI 305
RG AC+FDK+KIAA VANFSVVSLDEDQIAANLVKNGPLAVAINAV+MQTYIGGVSCPYI
Sbjct: 243 RG-ACQFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYI 301
Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 365
CS+RLDHGVLLVGYGSAGYAPIR+KEKPYWIIKNSWGE+WGE+GYYKICRGRN+CGVDSM
Sbjct: 302 CSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGENWGESGYYKICRGRNICGVDSM 361
Query: 366 VSTVAA 371
VSTVAA
Sbjct: 362 VSTVAA 367
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118481169|gb|ABK92536.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224105327|ref|XP_002313770.1| predicted protein [Populus trichocarpa] gi|222850178|gb|EEE87725.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|60396844|gb|AAX19661.1| cysteine proteinase [Populus tomentosa] | Back alignment and taxonomy information |
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| >gi|224077886|ref|XP_002305451.1| predicted protein [Populus trichocarpa] gi|222848415|gb|EEE85962.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|57282617|emb|CAE54306.1| putative papain-like cysteine proteinase [Gossypium hirsutum] | Back alignment and taxonomy information |
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| >gi|7381219|gb|AAF61440.1|AF138264_1 papain-like cysteine proteinase isoform I [Ipomoea batatas] | Back alignment and taxonomy information |
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| >gi|7211741|gb|AAF40414.1|AF216783_1 papain-like cysteine proteinase isoform I [Ipomoea batatas] | Back alignment and taxonomy information |
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| >gi|449464688|ref|XP_004150061.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus] gi|449519862|ref|XP_004166953.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|7211745|gb|AAF40416.1|AF216785_1 papain-like cysteine proteinase isoform III [Ipomoea batatas] gi|7381223|gb|AAF61442.1|AF138266_1 papain-like cysteine proteinase isoform III [Ipomoea batatas] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 373 | ||||||
| TAIR|locus:2120222 | 368 | RD19 "RESPONSIVE TO DEHYDRATIO | 0.906 | 0.918 | 0.785 | 6.2e-149 | |
| TAIR|locus:2050145 | 361 | AT2G21430 [Arabidopsis thalian | 0.895 | 0.925 | 0.773 | 8.1e-147 | |
| TAIR|locus:2130180 | 373 | AT4G16190 [Arabidopsis thalian | 0.903 | 0.903 | 0.745 | 6.3e-140 | |
| TAIR|locus:2082687 | 367 | AT3G54940 [Arabidopsis thalian | 0.906 | 0.920 | 0.586 | 1.6e-109 | |
| DICTYBASE|DDB_G0290957 | 343 | cprA "cysteine proteinase 1" [ | 0.820 | 0.892 | 0.474 | 3.2e-72 | |
| DICTYBASE|DDB_G0291191 | 352 | DDB_G0291191 "cysteine proteas | 0.815 | 0.863 | 0.448 | 8.2e-67 | |
| FB|FBgn0260462 | 614 | CG12163 [Drosophila melanogast | 0.839 | 0.509 | 0.411 | 3.8e-62 | |
| DICTYBASE|DDB_G0279799 | 376 | cprB "cysteine proteinase 2" [ | 0.726 | 0.720 | 0.424 | 1.6e-61 | |
| ZFIN|ZDB-GENE-030131-9831 | 473 | ctsf "cathepsin F" [Danio reri | 0.772 | 0.608 | 0.452 | 2.1e-61 | |
| UNIPROTKB|E2RR02 | 460 | CTSF "Uncharacterized protein" | 0.831 | 0.673 | 0.436 | 1.2e-60 |
| TAIR|locus:2120222 RD19 "RESPONSIVE TO DEHYDRATION 19" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1454 (516.9 bits), Expect = 6.2e-149, P = 6.2e-149
Identities = 267/340 (78%), Positives = 298/340 (87%)
Query: 35 VTDGGDEILSHHES-TNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAAR 93
V DG D ++ +L +E HFSLFK+KF K YAS EEHD+RF++FKANLRRA R
Sbjct: 25 VNDGDDLVIRQVVGGAEPQVLTSEDHFSLFKRKFGKVYASNEEHDYRFSVFKANLRRARR 84
Query: 94 HQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREK 153
HQKLDPSATHG+TQFSDLT +EFR+ +LG+R +LPKDA++APILPT +LP DFDWR+
Sbjct: 85 HQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSGFKLPKDANKAPILPTENLPEDFDWRDH 144
Query: 154 GAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDS 213
GAV PVK+QGSCGSCWSFS TGALEGANFLATGKLVSLSEQQLVDCDHECDPEE SCDS
Sbjct: 145 GAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDS 204
Query: 214 GCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQ 273
GCNGGLMNSAFEYTLK GGLM+EEDYPYTG D G CK DKSKI ASV+NFSV+S+DE+Q
Sbjct: 205 GCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKD-GKTCKLDKSKIVASVSNFSVISIDEEQ 263
Query: 274 IAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKP 333
IAANLVKNGPLAVAINA YMQTYIGGVSCPYIC+RRL+HGVLLVGYG+AGYAP R KEKP
Sbjct: 264 IAANLVKNGPLAVAINAGYMQTYIGGVSCPYICTRRLNHGVLLVGYGAAGYAPARFKEKP 323
Query: 334 YWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAAV 373
YWIIKNSWGE+WGENG+YKIC+GRN+CGVDSMVSTVAA V
Sbjct: 324 YWIIKNSWGETWGENGFYKICKGRNICGVDSMVSTVAATV 363
|
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| TAIR|locus:2050145 AT2G21430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2130180 AT4G16190 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2082687 AT3G54940 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0290957 cprA "cysteine proteinase 1" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0291191 DDB_G0291191 "cysteine protease" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| FB|FBgn0260462 CG12163 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0279799 cprB "cysteine proteinase 2" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-030131-9831 ctsf "cathepsin F" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RR02 CTSF "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P25804 | CYSP_PEA | 3, ., 4, ., 2, 2, ., - | 0.7158 | 0.9222 | 0.9476 | N/A | no |
| P43296 | RD19A_ARATH | 3, ., 4, ., 2, 2, ., - | 0.7758 | 0.9034 | 0.9157 | no | no |
| P43295 | A494_ARATH | 3, ., 4, ., 2, 2, ., - | 0.7547 | 0.9436 | 0.9750 | yes | no |
| Q10716 | CYSP1_MAIZE | 3, ., 4, ., 2, 2, ., - | 0.7042 | 0.8981 | 0.9029 | N/A | no |
| P04988 | CYSP1_DICDI | 3, ., 4, ., 2, 2, ., - | 0.4676 | 0.8257 | 0.8979 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.22.15 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.4.22 | 0.766 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 373 | |||
| pfam00112 | 213 | pfam00112, Peptidase_C1, Papain family cysteine pr | 1e-111 | |
| cd02248 | 210 | cd02248, Peptidase_C1A, Peptidase C1A subfamily (M | 1e-103 | |
| smart00645 | 175 | smart00645, Pept_C1, Papain family cysteine protea | 3e-83 | |
| PTZ00203 | 348 | PTZ00203, PTZ00203, cathepsin L protease; Provisio | 4e-76 | |
| PTZ00021 | 489 | PTZ00021, PTZ00021, falcipain-2; Provisional | 1e-64 | |
| PTZ00200 | 448 | PTZ00200, PTZ00200, cysteine proteinase; Provision | 1e-57 | |
| cd02619 | 223 | cd02619, Peptidase_C1, C1 Peptidase family (MEROPS | 9e-40 | |
| cd02620 | 236 | cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro | 2e-39 | |
| cd02621 | 243 | cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al | 5e-39 | |
| cd02698 | 239 | cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th | 2e-26 | |
| smart00848 | 57 | smart00848, Inhibitor_I29, Cathepsin propeptide in | 9e-21 | |
| pfam08246 | 58 | pfam08246, Inhibitor_I29, Cathepsin propeptide inh | 3e-19 | |
| COG4870 | 372 | COG4870, COG4870, Cysteine protease [Posttranslati | 5e-18 | |
| PTZ00049 | 693 | PTZ00049, PTZ00049, cathepsin C-like protein; Prov | 5e-16 | |
| PTZ00364 | 548 | PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs | 1e-12 | |
| PTZ00462 | 1004 | PTZ00462, PTZ00462, Serine-repeat antigen protein; | 2e-09 |
| >gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease | Back alignment and domain information |
|---|
Score = 324 bits (832), Expect = e-111
Identities = 122/230 (53%), Positives = 142/230 (61%), Gaps = 22/230 (9%)
Query: 144 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 203
LP FDWREKGAV PVKDQG CGSCW+FS GALEG + TGKLVSLSEQQLVDCD
Sbjct: 1 LPESFDWREKGAVTPVKDQGQCGSCWAFSAVGALEGRYCIKTGKLVSLSEQQLVDCDTGN 60
Query: 204 DPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI-AASVA 262
+ GCNGGL ++AFEY K GG++ E DYPYT D CKF KS A +
Sbjct: 61 N---------GCNGGLPDNAFEYIKKNGGIVTESDYPYTAHDG--TCKFKKSNSKYAKIK 109
Query: 263 NFSVVSL-DEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGVLLVGY 319
+ V DE+ + A L KNGP++VAI+A Q Y GV CS LDH VL+VGY
Sbjct: 110 GYGDVPYNDEEALQAALAKNGPVSVAIDAYEDDFQLYKSGVYKHTECSGELDHAVLIVGY 169
Query: 320 GSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTV 369
G+ PYWI+KNSWG WGENGY++I RG N CG+ S S
Sbjct: 170 GTEN-------GVPYWIVKNSWGTDWGENGYFRIARGVNECGIASEASYP 212
|
Length = 213 |
| >gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) | Back alignment and domain information |
|---|
| >gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease | Back alignment and domain information |
|---|
| >gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) | Back alignment and domain information |
|---|
| >gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) | Back alignment and domain information |
|---|
| >gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access | Back alignment and domain information |
|---|
| >gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity | Back alignment and domain information |
|---|
| >gnl|CDD|214853 smart00848, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) | Back alignment and domain information |
|---|
| >gnl|CDD|219764 pfam08246, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) | Back alignment and domain information |
|---|
| >gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185641 PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 373 | |||
| KOG1542 | 372 | consensus Cysteine proteinase Cathepsin F [Posttra | 100.0 | |
| PTZ00203 | 348 | cathepsin L protease; Provisional | 100.0 | |
| PTZ00021 | 489 | falcipain-2; Provisional | 100.0 | |
| PTZ00200 | 448 | cysteine proteinase; Provisional | 100.0 | |
| KOG1543 | 325 | consensus Cysteine proteinase Cathepsin L [Posttra | 100.0 | |
| cd02621 | 243 | Peptidase_C1A_CathepsinC Cathepsin C; also known a | 100.0 | |
| cd02698 | 239 | Peptidase_C1A_CathepsinX Cathepsin X; the only pap | 100.0 | |
| cd02620 | 236 | Peptidase_C1A_CathepsinB Cathepsin B group; compos | 100.0 | |
| cd02248 | 210 | Peptidase_C1A Peptidase C1A subfamily (MEROPS data | 100.0 | |
| PTZ00364 | 548 | dipeptidyl-peptidase I precursor; Provisional | 100.0 | |
| PTZ00049 | 693 | cathepsin C-like protein; Provisional | 100.0 | |
| PF00112 | 219 | Peptidase_C1: Papain family cysteine protease This | 100.0 | |
| smart00645 | 174 | Pept_C1 Papain family cysteine protease. | 100.0 | |
| cd02619 | 223 | Peptidase_C1 C1 Peptidase family (MEROPS database | 100.0 | |
| PTZ00462 | 1004 | Serine-repeat antigen protein; Provisional | 100.0 | |
| KOG1544 | 470 | consensus Predicted cysteine proteinase TIN-ag [Ge | 100.0 | |
| COG4870 | 372 | Cysteine protease [Posttranslational modification, | 99.97 | |
| cd00585 | 437 | Peptidase_C1B Peptidase C1B subfamily (MEROPS data | 99.91 | |
| PF03051 | 438 | Peptidase_C1_2: Peptidase C1-like family This fami | 99.71 | |
| PF08246 | 58 | Inhibitor_I29: Cathepsin propeptide inhibitor doma | 99.64 | |
| smart00848 | 57 | Inhibitor_I29 Cathepsin propeptide inhibitor domai | 99.46 | |
| COG3579 | 444 | PepC Aminopeptidase C [Amino acid transport and me | 98.97 | |
| KOG4128 | 457 | consensus Bleomycin hydrolases and aminopeptidases | 97.64 | |
| PF05543 | 175 | Peptidase_C47: Staphopain peptidase C47; InterPro: | 96.85 | |
| PF13529 | 144 | Peptidase_C39_2: Peptidase_C39 like family; PDB: 3 | 96.4 | |
| PF08127 | 41 | Propeptide_C1: Peptidase family C1 propeptide; Int | 90.59 | |
| PF09778 | 212 | Guanylate_cyc_2: Guanylylate cyclase; InterPro: IP | 89.61 | |
| PF14399 | 317 | Transpep_BrtH: NlpC/p60-like transpeptidase | 89.22 | |
| PF07172 | 95 | GRP: Glycine rich protein family; InterPro: IPR010 | 88.8 | |
| PF10731 | 65 | Anophelin: Thrombin inhibitor from mosquito; Inter | 87.66 | |
| PF05984 | 100 | Cytomega_UL20A: Cytomegalovirus UL20A protein; Int | 87.42 | |
| COG4990 | 195 | Uncharacterized protein conserved in bacteria [Fun | 84.33 |
| >KOG1542 consensus Cysteine proteinase Cathepsin F [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-97 Score=681.98 Aligned_cols=327 Identities=63% Similarity=1.080 Sum_probs=298.6
Q ss_pred CCcCCCcccceeeeecCCCccccccccccCCccchHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHHHHHhcCCCC-C
Q 017318 22 GTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-S 100 (373)
Q Consensus 22 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~F~~f~~~~~K~Y~~~eE~~~R~~iF~~Nl~~i~~~n~~~~-s 100 (373)
......++..||+|+...+ +.+..++.+++|..|+.+|+|+|.+.||+.+|+.||+.|+.++++++..++ +
T Consensus 41 ~~v~~~~~~~i~~v~~~~~--------~~~~~l~~~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~~d~gs 112 (372)
T KOG1542|consen 41 SVVPLGDDLTIRQVVRLQD--------LNPRGLGLEDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQENDPGS 112 (372)
T ss_pred cccccchhhhhhhhhhhcc--------cCCcccchHHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhhcCccc
Confidence 4455567888999986321 135567779999999999999999999999999999999999999999998 9
Q ss_pred eeeecccCCCCChHHHhhhhcccccc-cCCCCCCCCCCCCCCCCCCCeeecCcCCCCCccccCCCCcchHHHHHHHHHHH
Q 017318 101 ATHGITQFSDLTPAEFRRTYLGLRRK-LRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179 (373)
Q Consensus 101 ~~~g~n~FaDlt~~Ef~~~~~g~~~~-~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~vtpVkdQg~cGsCwAfA~~~alE~ 179 (373)
.++|+|+|+|||++||++++++.+.. .+.+.+....+..+...||++||||++|+||||||||+||||||||+++++|+
T Consensus 113 A~yGvtqFSDlT~eEFkk~~l~~~~~~~~~~~~~~~~~~~~~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEg 192 (372)
T KOG1542|consen 113 AEYGVTQFSDLTEEEFKKIYLGVKRRGSKLPGDAAEAPIEPGESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEG 192 (372)
T ss_pred cccCccchhhcCHHHHHHHhhccccccccCccccccCcCCCCCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhh
Confidence 99999999999999999999987653 34445556666677889999999999999999999999999999999999999
Q ss_pred HHHHhcCCccccCHhHhhhcCCCCCCCCCCCCCCCCCCCchHHHHHHHHHcCCCCCCCCcCCCCCCCCCCCcCCCCCceE
Q 017318 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAA 259 (373)
Q Consensus 180 ~~~~~~g~~~~LS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~~C~~~~~~~~~ 259 (373)
+++|++|++++||||||+||+. +++||+||++.+||+|+++.+|+..|++|||++... ..|.++..+..+
T Consensus 193 a~~i~~g~LvsLSEQeLvDCD~---------~d~gC~GGl~~nA~~~~~~~gGL~~E~dYPY~g~~~-~~C~~~~~~~~v 262 (372)
T KOG1542|consen 193 AWAIATGKLVSLSEQELVDCDS---------CDNGCNGGLMDNAFKYIKKAGGLEKEKDYPYTGKKG-NQCHFDKSKIVV 262 (372)
T ss_pred HHHhhcCcccccchhhhhcccC---------cCCcCCCCChhHHHHHHHHhCCccccccCCccccCC-CccccchhhceE
Confidence 9999999999999999999996 499999999999999999999999999999999982 399999999999
Q ss_pred EEeeeeeeCchHHHHHHHHHhCCCeEEEEEccccccccCceecC--CCCCCC-CCeEEEEEEEeccCCCCCCCCCCCEEE
Q 017318 260 SVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCP--YICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWI 336 (373)
Q Consensus 260 ~i~~~~~i~~~~~~ik~~l~~~gPV~v~i~~~~f~~y~~Gi~~~--~~c~~~-~~HaV~iVGyg~~~~~~~~~~g~~ywi 336 (373)
.|.+|..++.||++|.++|+++|||+|+|++..||+|.+||++| ..|++. ++|||+|||||.++ -.++|||
T Consensus 263 ~I~~f~~l~~nE~~ia~wLv~~GPi~vgiNa~~mQ~YrgGV~~P~~~~Cs~~~~~HaVLlvGyG~~g------~~~PYWI 336 (372)
T KOG1542|consen 263 SIKDFSMLSNNEDQIAAWLVTFGPLSVGINAKPMQFYRGGVSCPSKYICSPKLLNHAVLLVGYGSSG------YEKPYWI 336 (372)
T ss_pred EEeccEecCCCHHHHHHHHHhcCCeEEEEchHHHHHhcccccCCCcccCCccccCceEEEEeecCCC------CCCceEE
Confidence 99999999999999999999999999999988899999999998 889988 99999999999983 2799999
Q ss_pred EEcCCCCCCCCCcEEEEEcCCCeecccCceeeEEec
Q 017318 337 IKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372 (373)
Q Consensus 337 ikNSWG~~WGe~GY~~i~r~~n~CGi~~~~~~~~~~ 372 (373)
||||||++|||+|||||.||.|.|||++|+++++++
T Consensus 337 VKNSWG~~WGE~GY~~l~RG~N~CGi~~mvss~~v~ 372 (372)
T KOG1542|consen 337 VKNSWGTSWGEKGYYKLCRGSNACGIADMVSSAAVN 372 (372)
T ss_pred EECCccccccccceEEEeccccccccccchhhhhcC
Confidence 999999999999999999999999999999988763
|
|
| >PTZ00203 cathepsin L protease; Provisional | Back alignment and domain information |
|---|
| >PTZ00021 falcipain-2; Provisional | Back alignment and domain information |
|---|
| >PTZ00200 cysteine proteinase; Provisional | Back alignment and domain information |
|---|
| >KOG1543 consensus Cysteine proteinase Cathepsin L [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access | Back alignment and domain information |
|---|
| >cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity | Back alignment and domain information |
|---|
| >cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) | Back alignment and domain information |
|---|
| >cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) | Back alignment and domain information |
|---|
| >PTZ00364 dipeptidyl-peptidase I precursor; Provisional | Back alignment and domain information |
|---|
| >PTZ00049 cathepsin C-like protein; Provisional | Back alignment and domain information |
|---|
| >PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification | Back alignment and domain information |
|---|
| >smart00645 Pept_C1 Papain family cysteine protease | Back alignment and domain information |
|---|
| >cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) | Back alignment and domain information |
|---|
| >PTZ00462 Serine-repeat antigen protein; Provisional | Back alignment and domain information |
|---|
| >KOG1544 consensus Predicted cysteine proteinase TIN-ag [General function prediction only] | Back alignment and domain information |
|---|
| >COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) | Back alignment and domain information |
|---|
| >PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively | Back alignment and domain information |
|---|
| >smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) | Back alignment and domain information |
|---|
| >COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG4128 consensus Bleomycin hydrolases and aminopeptidases of cysteine protease family [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A | Back alignment and domain information |
|---|
| >PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A | Back alignment and domain information |
|---|
| >PF09778 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IPR018616 Members of this family of proteins catalyse the conversion of guanosine triphosphate (GTP) to 3',5'-cyclic guanosine monophosphate (cGMP) and pyrophosphate | Back alignment and domain information |
|---|
| >PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase | Back alignment and domain information |
|---|
| >PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins | Back alignment and domain information |
|---|
| >PF10731 Anophelin: Thrombin inhibitor from mosquito; InterPro: IPR018932 Members of this family are all inhibitors of thrombin, the peptidase that is at the end of the blood coagulation cascade and which creates the clot by cleaving fibrinogen | Back alignment and domain information |
|---|
| >PF05984 Cytomega_UL20A: Cytomegalovirus UL20A protein; InterPro: IPR009245 This family consists of several Cytomegalovirus UL20A proteins | Back alignment and domain information |
|---|
| >COG4990 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 373 | ||||
| 1cjl_A | 312 | Crystal Structure Of A Cysteine Protease Proform Le | 2e-52 | ||
| 1cs8_A | 316 | Crystal Structure Of Procathepsin L Length = 316 | 8e-52 | ||
| 3hwn_A | 258 | Cathepsin L With Az13010160 Length = 258 | 6e-50 | ||
| 2p7u_A | 215 | The Crystal Structure Of Rhodesain, The Major Cyste | 1e-49 | ||
| 3qt4_A | 329 | Structure Of Digestive Procathepsin L 3 Of Tenebrio | 2e-49 | ||
| 2c0y_A | 315 | The Crystal Structure Of A Cys25ala Mutant Of Human | 6e-49 | ||
| 3qj3_A | 331 | Structure Of Digestive Procathepsin L2 Proteinase F | 2e-47 | ||
| 1ewp_A | 215 | Cruzain Bound To Mor-Leu-Hpq Length = 215 | 2e-46 | ||
| 1aim_A | 215 | Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor | 3e-46 | ||
| 2o6x_A | 310 | Crystal Structure Of Procathepsin L1 From Fasciola | 4e-46 | ||
| 1fh0_A | 221 | Crystal Structure Of Human Cathepsin V Complexed Wi | 5e-46 | ||
| 3iut_A | 221 | The Crystal Structure Of Cruzain In Complex With A | 6e-46 | ||
| 3hd3_A | 215 | High Resolution Crystal Structure Of Cruzain Bound | 6e-46 | ||
| 3hha_A | 220 | Crystal Structure Of Cathepsin L In Complex With Az | 9e-46 | ||
| 3of8_A | 221 | Structural Basis For Reversible And Irreversible In | 2e-45 | ||
| 3h89_A | 220 | A Combined Crystallographic And Molecular Dynamics | 3e-45 | ||
| 3h6s_A | 221 | Strucure Of Clitocypin - Cathepsin V Complex Length | 6e-45 | ||
| 3kse_A | 220 | Unreduced Cathepsin L In Complex With Stefin A Leng | 8e-45 | ||
| 2nqd_B | 221 | Crystal Structure Of Cysteine Protease Inhibitor, C | 2e-44 | ||
| 3iv2_A | 220 | Crystal Structure Of Mature Apo-Cathepsin L C25a Mu | 2e-44 | ||
| 3bc3_A | 220 | Exploring Inhibitor Binding At The S Subsites Of Ca | 4e-44 | ||
| 1m6d_A | 214 | Crystal Structure Of Human Cathepsin F Length = 214 | 8e-44 | ||
| 7pck_A | 314 | Crystal Structure Of Wild Type Human Procathepsin K | 1e-43 | ||
| 8pch_A | 220 | Crystal Structure Of Porcine Cathepsin H Determined | 2e-43 | ||
| 1s4v_A | 229 | The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst | 5e-42 | ||
| 3f75_A | 224 | Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In | 8e-42 | ||
| 1ms6_A | 222 | Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L | 1e-41 | ||
| 2f1g_A | 220 | Cathepsin S In Complex With Non-Covalent 2-(Benzoxa | 3e-41 | ||
| 3n3g_A | 217 | 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri | 4e-41 | ||
| 3ovx_A | 218 | Cathepsin S In Complex With A Covalent Inhibitor Wi | 4e-41 | ||
| 2fq9_A | 225 | Cathepsin S With Nitrile Inhibitor Length = 225 | 4e-41 | ||
| 2g6d_A | 217 | Human Cathepsin S Mutant With Vinyl Sulfone Inhibit | 6e-41 | ||
| 1npz_A | 217 | Crystal Structures Of Cathepsin S Inhibitor Complex | 6e-41 | ||
| 2fye_A | 217 | Mutant Human Cathepsin S With Irreversible Inhibito | 1e-40 | ||
| 1cqd_A | 221 | The 2.1 Angstrom Structure Of A Cysteine Protease W | 2e-40 | ||
| 2fo5_A | 262 | Crystal Structure Of Recombinant Barley Cysteine En | 2e-40 | ||
| 3mpe_A | 220 | Crystal Structure Of Human Cathepsin-S C25s Mutant | 4e-40 | ||
| 3iej_A | 222 | Pyrazole-Based Cathepsin S Inhibitors With Arylalky | 4e-40 | ||
| 3kwn_A | 219 | Cathepsin S In Complex With Thioether Acetamide P3 | 5e-40 | ||
| 2vhs_A | 217 | Cathsilicatein, A Chimera Length = 217 | 5e-40 | ||
| 1glo_A | 217 | Crystal Structure Of Cys25ser Mutant Of Human Cathe | 9e-40 | ||
| 3tnx_A | 363 | Structure Of The Precursor Of A Thermostable Varian | 2e-39 | ||
| 3h7d_A | 215 | The Crystal Structure Of The Cathepsin K Variant M5 | 3e-39 | ||
| 2f7d_A | 215 | A Mutant Rabbit Cathepsin K With A Nitrile Inhibito | 2e-38 | ||
| 1iwd_A | 215 | Proposed Amino Acid Sequence And The 1.63 Angstrom | 6e-38 | ||
| 1u9v_A | 217 | Crystal Structure Of The Cysteine Protease Human Ca | 1e-37 | ||
| 1snk_A | 214 | Cathepsin K Complexed With Carbamate Derivatized No | 1e-37 | ||
| 1mem_A | 215 | Crystal Structure Of Cathepsin K Complexed With A P | 1e-37 | ||
| 3p5w_A | 220 | Actinidin From Actinidia Arguta Planch (Sarusashi) | 2e-37 | ||
| 1vsn_A | 215 | Crystal Structure Of A Potent Small Molecule Inhibi | 3e-37 | ||
| 3ovz_A | 213 | Cathepsin K In Complex With A Covalent Inhibitor Wi | 4e-37 | ||
| 1pci_A | 322 | Procaricain Length = 322 | 1e-36 | ||
| 3u8e_A | 222 | Crystal Structure Of Cysteine Protease From Bulbs O | 1e-36 | ||
| 3p5u_A | 220 | Actinidin From Actinidia Arguta Planch (Sarusashi) | 3e-36 | ||
| 3bcn_A | 209 | Crystal Structure Of A Papain-Like Cysteine Proteas | 3e-36 | ||
| 1aec_A | 218 | Crystal Structure Of Actinidin-E-64 Complex+ Length | 3e-36 | ||
| 1o0e_A | 208 | 1.9 Angstrom Crystal Structure Of A Plant Cysteine | 8e-36 | ||
| 2pns_A | 208 | 1.9 Angstrom Resolution Crystal Structure Of A Plan | 2e-35 | ||
| 1icf_A | 175 | Crystal Structure Of Mhc Class Ii Associated P41 Ii | 4e-35 | ||
| 2b1m_A | 246 | Crystal Structure Of A Papain-Fold Protein Without | 8e-35 | ||
| 1mhw_A | 175 | Design Of Non-covalent Inhibitors Of Human Cathepsi | 5e-34 | ||
| 2act_A | 220 | Crystallographic Refinement Of The Structure Of Act | 9e-34 | ||
| 1yvb_A | 241 | The Plasmodium Falciparum Cysteine Protease Falcipa | 4e-33 | ||
| 2bdz_A | 214 | Mexicain From Jacaratia Mexicana Length = 214 | 1e-32 | ||
| 3pnr_A | 240 | Structure Of Pbicp-C In Complex With Falcipain-2 Le | 5e-32 | ||
| 1yal_A | 218 | Carica Papaya Chymopapain At 1.7 Angstroms Resoluti | 5e-31 | ||
| 1khp_A | 212 | Monoclinic Form Of Papain/zlfg-dam Covalent Complex | 5e-30 | ||
| 1pip_A | 212 | Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al | 6e-30 | ||
| 3pdf_A | 441 | Discovery Of Novel Cyanamide-Based Inhibitors Of Ca | 1e-29 | ||
| 1ppp_A | 212 | Crystal Structure Of Papain-E64-C Complex. Binding | 1e-29 | ||
| 2cio_A | 212 | The High Resolution X-Ray Structure Of Papain Compl | 6e-29 | ||
| 3ima_A | 212 | Complex Strcuture Of Tarocystatin And Papain Length | 7e-29 | ||
| 1stf_E | 212 | The Refined 2.4 Angstroms X-Ray Crystal Structure O | 8e-29 | ||
| 3bpm_A | 243 | Crystal Structure Of Falcipain-3 With Its Inhibitor | 2e-28 | ||
| 1ppo_A | 216 | Determination Of The Structure Of Papaya Protease O | 3e-28 | ||
| 1meg_A | 216 | Crystal Structure Of A Caricain D158e Mutant In Com | 9e-28 | ||
| 1gec_E | 216 | Glycyl Endopeptidase-complex With Benzyloxycarbonyl | 2e-27 | ||
| 3ioq_A | 213 | Crystal Structure Of The Carica Candamarcensis Cyst | 3e-27 | ||
| 1jqp_A | 438 | Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric | 5e-25 | ||
| 1xkg_A | 312 | Crystal Structure Of The Major House Dust Mite Alle | 2e-20 | ||
| 3qsd_A | 254 | Structure Of Cathepsin B1 From Schistosoma Mansoni | 3e-20 | ||
| 3d6s_A | 223 | Crystal Structure Of Mite Allergen Der F 1 Length = | 1e-19 | ||
| 1cpj_A | 260 | Crystal Structures Of Recombinant Rat Cathepsin B A | 6e-18 | ||
| 1pbh_A | 317 | Crystal Structure Of Human Recombinant Procathepsin | 7e-18 | ||
| 1cte_A | 254 | Crystal Structures Of Recombinant Rat Cathepsin B A | 1e-17 | ||
| 1mir_A | 322 | Rat Procathepsin B Length = 322 | 3e-17 | ||
| 1gmy_A | 261 | Cathepsin B Complexed With Dipeptidyl Nitrile Inhib | 3e-17 | ||
| 3k9m_A | 254 | Cathepsin B In Complex With Stefin A Length = 254 | 3e-17 | ||
| 3ai8_B | 256 | Cathepsin B In Complex With The Nitroxoline Length | 3e-17 | ||
| 3cbj_A | 266 | Chagasin-cathepsin B Complex Length = 266 | 3e-16 | ||
| 3rvw_A | 222 | Crystal Structure Of Der P 1 Complexed With Fab 4c1 | 4e-16 | ||
| 2as8_A | 222 | Crystal Structure Of Mature And Fully Active Der P | 4e-16 | ||
| 3f5v_A | 222 | C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 | 6e-15 | ||
| 3hhi_A | 325 | Crystal Structure Of Cathepsin B From T. Brucei In | 1e-14 | ||
| 3mor_A | 317 | Crystal Structure Of Cathepsin B From Trypanosoma B | 3e-14 | ||
| 4hwy_A | 340 | Trypanosoma Brucei Procathepsin B Solved From 40 Fs | 3e-14 | ||
| 1deu_A | 277 | Crystal Structure Of Human Procathepsin X: A Cystei | 2e-13 | ||
| 1ef7_A | 242 | Crystal Structure Of Human Cathepsin X Length = 242 | 1e-12 | ||
| 1qdq_A | 253 | X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 | 5e-12 | ||
| 1ito_A | 256 | Crystal Structure Analysis Of Bovine Spleen Catheps | 5e-12 | ||
| 1k3b_B | 164 | Crystal Structure Of Human Dipeptidyl Peptidase I ( | 2e-11 | ||
| 1k3b_C | 69 | Crystal Structure Of Human Dipeptidyl Peptidase I ( | 9e-11 | ||
| 1huc_B | 205 | The Refined 2.15 Angstroms X-Ray Crystal Structure | 3e-09 | ||
| 2wbf_X | 265 | Crystal Structure Analysis Of Sera5e From Plasmodiu | 3e-09 | ||
| 3ch2_X | 265 | Crystal Structure Analysis Of Sera5e From Plasmodiu | 4e-09 | ||
| 1sp4_B | 205 | Crystal Structure Of Ns-134 In Complex With Bovine | 6e-09 | ||
| 3f75_P | 106 | Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In | 5e-08 | ||
| 1icf_B | 42 | Crystal Structure Of Mhc Class Ii Associated P41 Ii | 3e-04 | ||
| 1huc_A | 47 | The Refined 2.15 Angstroms X-Ray Crystal Structure | 5e-04 |
| >pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 | Back alignment and structure |
|
| >pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 | Back alignment and structure |
| >pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 | Back alignment and structure |
| >pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 | Back alignment and structure |
| >pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 | Back alignment and structure |
| >pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 | Back alignment and structure |
| >pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 | Back alignment and structure |
| >pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 | Back alignment and structure |
| >pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 | Back alignment and structure |
| >pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 | Back alignment and structure |
| >pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 | Back alignment and structure |
| >pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 | Back alignment and structure |
| >pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 | Back alignment and structure |
| >pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 | Back alignment and structure |
| >pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 | Back alignment and structure |
| >pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 | Back alignment and structure |
| >pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 | Back alignment and structure |
| >pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 | Back alignment and structure |
| >pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 | Back alignment and structure |
| >pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 | Back alignment and structure |
| >pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 | Back alignment and structure |
| >pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 | Back alignment and structure |
| >pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 | Back alignment and structure |
| >pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 | Back alignment and structure |
| >pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 | Back alignment and structure |
| >pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 | Back alignment and structure |
| >pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 | Back alignment and structure |
| >pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 | Back alignment and structure |
| >pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 | Back alignment and structure |
| >pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 | Back alignment and structure |
| >pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 | Back alignment and structure |
| >pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 | Back alignment and structure |
| >pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 | Back alignment and structure |
| >pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 | Back alignment and structure |
| >pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 | Back alignment and structure |
| >pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 | Back alignment and structure |
| >pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 | Back alignment and structure |
| >pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 | Back alignment and structure |
| >pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 | Back alignment and structure |
| >pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 | Back alignment and structure |
| >pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 | Back alignment and structure |
| >pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 | Back alignment and structure |
| >pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 | Back alignment and structure |
| >pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 | Back alignment and structure |
| >pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 | Back alignment and structure |
| >pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 | Back alignment and structure |
| >pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 | Back alignment and structure |
| >pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 | Back alignment and structure |
| >pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 | Back alignment and structure |
| >pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 | Back alignment and structure |
| >pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 | Back alignment and structure |
| >pdb|1PCI|A Chain A, Procaricain Length = 322 | Back alignment and structure |
| >pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 | Back alignment and structure |
| >pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 | Back alignment and structure |
| >pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 | Back alignment and structure |
| >pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 | Back alignment and structure |
| >pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 | Back alignment and structure |
| >pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 | Back alignment and structure |
| >pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 | Back alignment and structure |
| >pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 | Back alignment and structure |
| >pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 | Back alignment and structure |
| >pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 | Back alignment and structure |
| >pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 | Back alignment and structure |
| >pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 | Back alignment and structure |
| >pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 | Back alignment and structure |
| >pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 | Back alignment and structure |
| >pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 | Back alignment and structure |
| >pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 | Back alignment and structure |
| >pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 | Back alignment and structure |
| >pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 | Back alignment and structure |
| >pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 | Back alignment and structure |
| >pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 | Back alignment and structure |
| >pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 | Back alignment and structure |
| >pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 | Back alignment and structure |
| >pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 | Back alignment and structure |
| >pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 | Back alignment and structure |
| >pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 | Back alignment and structure |
| >pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 | Back alignment and structure |
| >pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 | Back alignment and structure |
| >pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 | Back alignment and structure |
| >pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 | Back alignment and structure |
| >pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 | Back alignment and structure |
| >pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 | Back alignment and structure |
| >pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 | Back alignment and structure |
| >pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 | Back alignment and structure |
| >pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 | Back alignment and structure |
| >pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 | Back alignment and structure |
| >pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 | Back alignment and structure |
| >pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 | Back alignment and structure |
| >pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 | Back alignment and structure |
| >pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 | Back alignment and structure |
| >pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 | Back alignment and structure |
| >pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 | Back alignment and structure |
| >pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 | Back alignment and structure |
| >pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 | Back alignment and structure |
| >pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 | Back alignment and structure |
| >pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 | Back alignment and structure |
| >pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 | Back alignment and structure |
| >pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 | Back alignment and structure |
| >pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 | Back alignment and structure |
| >pdb|1K3B|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 164 | Back alignment and structure |
| >pdb|1K3B|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 69 | Back alignment and structure |
| >pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 205 | Back alignment and structure |
| >pdb|2WBF|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum With Loop 690-700 Ordered Length = 265 | Back alignment and structure |
| >pdb|3CH2|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum Length = 265 | Back alignment and structure |
| >pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 | Back alignment and structure |
| >pdb|3F75|P Chain P, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 106 | Back alignment and structure |
| >pdb|1ICF|B Chain B, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 42 | Back alignment and structure |
| >pdb|1HUC|A Chain A, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 47 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 | Back alignment and structure |
|---|
Score = 420 bits (1082), Expect = e-148
Identities = 113/327 (34%), Positives = 164/327 (50%), Gaps = 34/327 (10%)
Query: 57 EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
+ FK + ++Y + +E R IF+ L H + G+ F+D+T
Sbjct: 19 AEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMT 78
Query: 113 PAEFRRTYLGLRRKLRLPKDADQAP------ILPTNDLPADFDWREKGAVGPVKDQGSCG 166
P E + GL L K+ + + PA FDWR++G V PVK+QGSCG
Sbjct: 79 PEEMKAYTHGLIMPADLHKNGIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCG 138
Query: 167 SCWSFSTTGALEGANFLATGKLV--SLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAF 224
S W+FS+TGA+E +A G S+SEQQLVDC GC+GG MN AF
Sbjct: 139 SSWAFSSTGAIESQMKIANGAGYDSSVSEQQLVDCVPN---------ALGCSGGWMNDAF 189
Query: 225 EYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVV-SLDEDQIAANLVKNGP 283
Y + GG+ E YPY D C +D +++AA ++ + + DE+ +A + GP
Sbjct: 190 TYVAQNGGIDSEGAYPYEMADG--NCHYDPNQVAARLSGYVYLSGPDENMLADMVATKGP 247
Query: 284 LAVAINAV-YMQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSW 341
+AVA +A +Y GGV C + H VL+VGYG+ + YW++KNSW
Sbjct: 248 VAVAFDADDPFGSYSGGVYYNPTCETNKFTHAVLIVGYGNE-------NGQDYWLVKNSW 300
Query: 342 GESWGENGYYKICRGR-NVCGVDSMVS 367
G+ WG +GY+KI R N CG+ + S
Sbjct: 301 GDGWGLDGYFKIARNANNHCGIAGVAS 327
|
| >1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 | Back alignment and structure |
|---|
| >2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
| >1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 | Back alignment and structure |
|---|
| >2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 | Back alignment and structure |
|---|
| >1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 | Back alignment and structure |
|---|
| >1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 | Back alignment and structure |
|---|
| >3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 | Back alignment and structure |
|---|
| >3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 | Back alignment and structure |
|---|
| >1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 | Back alignment and structure |
|---|
| >2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 | Back alignment and structure |
|---|
| >3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 | Back alignment and structure |
|---|
| >3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 | Back alignment and structure |
|---|
| >2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 | Back alignment and structure |
|---|
| >8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 | Back alignment and structure |
|---|
| >2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 | Back alignment and structure |
|---|
| >3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 | Back alignment and structure |
|---|
| >1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 | Back alignment and structure |
|---|
| >3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 | Back alignment and structure |
|---|
| >2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 | Back alignment and structure |
|---|
| >2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 | Back alignment and structure |
|---|
| >1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 | Back alignment and structure |
|---|
| >1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 | Back alignment and structure |
|---|
| >2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 | Back alignment and structure |
|---|
| >3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 | Back alignment and structure |
|---|
| >3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 | Back alignment and structure |
|---|
| >1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 | Back alignment and structure |
|---|
| >2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 | Back alignment and structure |
|---|
| >1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 | Back alignment and structure |
|---|
| >1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 | Back alignment and structure |
|---|
| >3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 | Back alignment and structure |
|---|
| >3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 | Back alignment and structure |
|---|
| >1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 | Back alignment and structure |
|---|
| >3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 | Back alignment and structure |
|---|
| >3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 | Back alignment and structure |
|---|
| >3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 | Back alignment and structure |
|---|
| >3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 | Back alignment and structure |
|---|
| >3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 106 | Back alignment and structure |
|---|
| >2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Length = 80 | Back alignment and structure |
|---|
| >3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 | Back alignment and structure |
|---|
| >3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 373 | |||
| 3qj3_A | 331 | Cathepsin L-like protein; hydrolase, proteinase, l | 100.0 | |
| 3qt4_A | 329 | Cathepsin-L-like midgut cysteine proteinase; hydro | 100.0 | |
| 1by8_A | 314 | Protein (procathepsin K); hydrolase(sulfhydryl pro | 100.0 | |
| 2c0y_A | 315 | Procathepsin S; proenzyme, proteinase, hydrolase, | 100.0 | |
| 2o6x_A | 310 | Procathepsin L1, secreted cathepsin L 1; hydrolase | 100.0 | |
| 1cs8_A | 316 | Human procathepsin L; prosegment, propeptide, inhi | 100.0 | |
| 3tnx_A | 363 | Papain; hydrolase, cytoplasm for recombinant expre | 100.0 | |
| 1pci_A | 322 | Procaricain; zymogen, hydrolase, thiol protease; 3 | 100.0 | |
| 1xkg_A | 312 | DER P I, major mite fecal allergen DER P 1; major | 100.0 | |
| 3pdf_A | 441 | Cathepsin C, dipeptidyl peptidase 1; two domains, | 100.0 | |
| 3hhi_A | 325 | Cathepsin B-like cysteine protease; occluding loop | 100.0 | |
| 3pbh_A | 317 | Procathepsin B; thiol protease, cysteine protease, | 100.0 | |
| 1m6d_A | 214 | Cathepsin F, catsf; papain family cysteine proteas | 100.0 | |
| 3i06_A | 215 | Cruzipain; autocatalytic cleavage, glycoprotein, p | 100.0 | |
| 3kwz_A | 215 | Cathepsin K; enzyme inhibitor, covalent reversible | 100.0 | |
| 8pch_A | 220 | Cathepsin H; hydrolase, protease, cysteine protein | 100.0 | |
| 2xu3_A | 220 | Cathepsin L1; hydrolase, drug design, thiol protea | 100.0 | |
| 3ovx_A | 218 | Cathepsin S; hydrolase, covalent inhibitor, aldehy | 100.0 | |
| 1cqd_A | 221 | Protein (protease II); cysteine protease, glycopro | 100.0 | |
| 2b1m_A | 246 | SPE31; papain-like, sugar binding protein; HET: NA | 100.0 | |
| 1iwd_A | 215 | Ervatamin B; cysteine protease, alpha-beta protein | 100.0 | |
| 3u8e_A | 222 | Papain-like cysteine protease; papain-like cystein | 100.0 | |
| 3p5u_A | 220 | Actinidin; SAD, cysteine proteinases, hydrolase; 1 | 100.0 | |
| 3f5v_A | 222 | DER P 1 allergen; allergy, asthma, DUST mites, gly | 100.0 | |
| 1ppo_A | 216 | Protease omega; hydrolase(thiol protease); 1.80A { | 100.0 | |
| 1yal_A | 218 | Chymopapain; hydrolase, thiol protease; 1.70A {Car | 100.0 | |
| 2oul_A | 241 | Falcipain 2; cysteine protease, inhibitor, macromo | 100.0 | |
| 3bwk_A | 243 | Cysteine protease falcipain-3; malaria, hydrolase; | 100.0 | |
| 1o0e_A | 208 | Ervatamin C; plant cysteine protease, two domain, | 100.0 | |
| 1s4v_A | 229 | Cysteine endopeptidase; KDEL ER retention signal, | 100.0 | |
| 3ioq_A | 213 | CMS1MS2; caricaceae, cysteine protease, papain fam | 100.0 | |
| 3f75_A | 224 | Toxopain-2, cathepsin L protease; medical structur | 100.0 | |
| 2cio_A | 212 | Papain; hydrolase/inhibitor, complex hydrolase/inh | 100.0 | |
| 2fo5_A | 262 | Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst | 100.0 | |
| 2bdz_A | 214 | Mexicain; cysteine protease, peptidase_C1, papain- | 100.0 | |
| 3qsd_A | 254 | Cathepsin B-like peptidase (C01 family); cysteine | 100.0 | |
| 3cbj_A | 266 | Cathepsin B; cathepsin B, occluding loop, chagas d | 100.0 | |
| 1deu_A | 277 | Procathepsin X; cysteine protease, proregion, pros | 100.0 | |
| 2wbf_X | 265 | Serine-repeat antigen protein; SERA, malaria, vacu | 100.0 | |
| 3ois_A | 291 | Cysteine protease; alpha and beta, hydrolase; HET: | 100.0 | |
| 2cb5_A | 453 | Protein (bleomycin hydrolase); aminopeptidase, cys | 100.0 | |
| 2e01_A | 457 | Cysteine proteinase 1; bleomycin hydrolase, thiol | 100.0 | |
| 3pw3_A | 383 | Aminopeptidase C; bleomycin, cysteine proteinase f | 100.0 | |
| 3f75_P | 106 | Toxopain-2, cathepsin L propeptide; medical struct | 99.74 | |
| 2l95_A | 80 | Crammer, LP06209P; cysteine proteinase inhibitor, | 99.71 | |
| 1pxv_A | 183 | Cysteine protease; hydrolase; 1.80A {Staphylococcu | 97.34 | |
| 1cv8_A | 174 | Staphopain; cysteine protease, thiol protease, pap | 97.27 | |
| 1x9y_A | 367 | Cysteine proteinase; half-barrel, barrel-sandwich- | 97.07 | |
| 3erv_A | 236 | Putative C39-like peptidase; structural genomics, | 81.07 |
| >3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-84 Score=624.79 Aligned_cols=297 Identities=39% Similarity=0.741 Sum_probs=266.0
Q ss_pred hHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHHHHHhcCC----CCCeeeecccCCCCChHHHhhhhcccccccCCCC
Q 017318 56 AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPK 131 (373)
Q Consensus 56 ~~~~F~~f~~~~~K~Y~~~eE~~~R~~iF~~Nl~~i~~~n~~----~~s~~~g~n~FaDlt~~Ef~~~~~g~~~~~~~~~ 131 (373)
.+..|++|+++|+|.|.+.+|+.+|+.||++|+++|++||+. +.+|++|+|+|+|||.+||++++++...+.....
T Consensus 18 l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~~~~~~ 97 (331)
T 3qj3_A 18 VAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMPADLHK 97 (331)
T ss_dssp HHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCCSSTTT
T ss_pred HHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhccccccccccc
Confidence 468899999999999999999999999999999999999975 6799999999999999999998887654211100
Q ss_pred CCCC-CCC-----CCCCCCCCeeecCcCCCCCccccCCCCcchHHHHHHHHHHHHHHHhcCC--ccccCHhHhhhcCCCC
Q 017318 132 DADQ-API-----LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK--LVSLSEQQLVDCDHEC 203 (373)
Q Consensus 132 ~~~~-~~~-----~~~~~lP~~~Dwr~~g~vtpVkdQg~cGsCwAfA~~~alE~~~~~~~g~--~~~LS~q~l~dc~~~~ 203 (373)
.... ... ....+||++||||++|+||||||||.||||||||++++||+++++++|+ .++||||+|+||+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~LvdC~~~- 176 (331)
T 3qj3_A 98 NGIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLVDCVPN- 176 (331)
T ss_dssp TCEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHHHHHCTT-
T ss_pred cCcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHHhhhccC-
Confidence 0000 000 0224799999999999999999999999999999999999999999998 899999999999975
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHcCCCCCCCCcCCCCCCCCCCCcCCCCCceEEEeeeeeeCc-hHHHHHHHHHhCC
Q 017318 204 DPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNG 282 (373)
Q Consensus 204 ~~~~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~~C~~~~~~~~~~i~~~~~i~~-~~~~ik~~l~~~g 282 (373)
+.||+||++..|++|+.+++||++|++|||.+.+ +.|+.......+++.+|..++. ++++||++|+++|
T Consensus 177 --------~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~--~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~G 246 (331)
T 3qj3_A 177 --------ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMAD--GNCHYDPNQVAARLSGYVYLSGPDENMLADMVATKG 246 (331)
T ss_dssp --------SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSC--CCCCCCTTSEEECCSEEEEESSCCHHHHHHHHHHHC
T ss_pred --------CCCCCCCCHHHHHHHHHHcCCcCcccccCccCCC--CCCCCCcccceeEeeEEEEeCCCCHHHHHHHHHhCC
Confidence 7899999999999999998899999999999988 8999888888889999999986 8999999999999
Q ss_pred CeEEEEEccc-cccccCceecCCCCCC-CCCeEEEEEEEeccCCCCCCCCCCCEEEEEcCCCCCCCCCcEEEEEcCC-Ce
Q 017318 283 PLAVAINAVY-MQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR-NV 359 (373)
Q Consensus 283 PV~v~i~~~~-f~~y~~Gi~~~~~c~~-~~~HaV~iVGyg~~~~~~~~~~g~~ywiikNSWG~~WGe~GY~~i~r~~-n~ 359 (373)
||+|+|++.. |++|++|||..+.|.. .++|||+|||||++ +|++|||||||||++|||+|||||+||. |.
T Consensus 247 PV~v~i~a~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~ 319 (331)
T 3qj3_A 247 PVAVAFDADDPFGSYSGGVYYNPTCETNKFTHAVLIVGYGNE-------NGQDYWLVKNSWGDGWGLDGYFKIARNANNH 319 (331)
T ss_dssp CEEEEECCCTTGGGEEEEEECCTTCCSSCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEECSSSSG
T ss_pred CEEEEEEcccccccccCceEeCCCCCCCcCCEEEEEEEEecc-------CCceEEEEEcCCCCCcCCCCEEEEEcCCCCc
Confidence 9999999876 9999999999988974 49999999999987 6899999999999999999999999998 99
Q ss_pred ecccCceeeEE
Q 017318 360 CGVDSMVSTVA 370 (373)
Q Consensus 360 CGi~~~~~~~~ 370 (373)
|||+++++++.
T Consensus 320 CgI~~~~~~p~ 330 (331)
T 3qj3_A 320 CGIAGVASVPT 330 (331)
T ss_dssp GGTTTSCEEEE
T ss_pred cCcCCceeeee
Confidence 99999999875
|
| >3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} | Back alignment and structure |
|---|
| >1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A | Back alignment and structure |
|---|
| >2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
| >2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} | Back alignment and structure |
|---|
| >1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* | Back alignment and structure |
|---|
| >3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} | Back alignment and structure |
|---|
| >1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 | Back alignment and structure |
|---|
| >1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 | Back alignment and structure |
|---|
| >3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* | Back alignment and structure |
|---|
| >3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* | Back alignment and structure |
|---|
| >3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A | Back alignment and structure |
|---|
| >1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 | Back alignment and structure |
|---|
| >3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... | Back alignment and structure |
|---|
| >3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... | Back alignment and structure |
|---|
| >8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* | Back alignment and structure |
|---|
| >2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... | Back alignment and structure |
|---|
| >3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... | Back alignment and structure |
|---|
| >1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 | Back alignment and structure |
|---|
| >2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* | Back alignment and structure |
|---|
| >1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 | Back alignment and structure |
|---|
| >3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 | Back alignment and structure |
|---|
| >1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* | Back alignment and structure |
|---|
| >1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* | Back alignment and structure |
|---|
| >2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A | Back alignment and structure |
|---|
| >3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* | Back alignment and structure |
|---|
| >1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* | Back alignment and structure |
|---|
| >1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 | Back alignment and structure |
|---|
| >3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 | Back alignment and structure |
|---|
| >3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 | Back alignment and structure |
|---|
| >2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... | Back alignment and structure |
|---|
| >2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} | Back alignment and structure |
|---|
| >2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} | Back alignment and structure |
|---|
| >3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* | Back alignment and structure |
|---|
| >3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... | Back alignment and structure |
|---|
| >1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A | Back alignment and structure |
|---|
| >2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X | Back alignment and structure |
|---|
| >3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} | Back alignment and structure |
|---|
| >2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A | Back alignment and structure |
|---|
| >2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A | Back alignment and structure |
|---|
| >3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} | Back alignment and structure |
|---|
| >3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} | Back alignment and structure |
|---|
| >2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} | Back alignment and structure |
|---|
| >1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A | Back alignment and structure |
|---|
| >1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 | Back alignment and structure |
|---|
| >1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 | Back alignment and structure |
|---|
| >3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 373 | ||||
| d1cs8a_ | 316 | d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens | 1e-77 | |
| d1xkga1 | 302 | d.3.1.1 (A:4-305) Major mite fecal allergen der p | 3e-68 | |
| d1m6da_ | 214 | d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta | 1e-64 | |
| d2h7ja1 | 217 | d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa | 2e-63 | |
| d1fh0a_ | 221 | d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens | 7e-62 | |
| g8pch.1 | 228 | d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax | 6e-61 | |
| d1cqda_ | 216 | d.3.1.1 (A:) Proline-specific cysteine protease {G | 1e-60 | |
| d2oula1 | 241 | d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip | 2e-60 | |
| d1gmya_ | 254 | d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens | 2e-59 | |
| d1o0ea_ | 208 | d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv | 3e-58 | |
| d1yala_ | 218 | d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ | 5e-58 | |
| d2r6na1 | 215 | d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa | 2e-57 | |
| d1aeca_ | 218 | d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi | 4e-57 | |
| d1me4a_ | 215 | d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 | 4e-56 | |
| d1s4va_ | 224 | d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor | 8e-56 | |
| d1ppoa_ | 216 | d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca | 2e-55 | |
| d1iwda_ | 215 | d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia | 6e-55 | |
| d1khqa_ | 212 | d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId | 2e-54 | |
| g1k3b.1 | 233 | d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase | 2e-54 | |
| d1deua_ | 275 | d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens | 1e-50 | |
| d3gcba_ | 458 | d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S | 5e-07 | |
| d3gcba_ | 458 | d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S | 1e-04 | |
| d2cb5a_ | 453 | d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapi | 3e-05 |
| >d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Papain-like domain: (Pro)cathepsin L species: Human (Homo sapiens) [TaxId: 9606]
Score = 239 bits (610), Expect = 1e-77
Identities = 121/319 (37%), Positives = 166/319 (52%), Gaps = 23/319 (7%)
Query: 57 EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
E ++ +K N+ Y EE R +++ N++ H + H + F D+T
Sbjct: 9 EAQWTKWKAMHNRLYGMNEEG-WRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMT 67
Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
EFR+ G + + Q P+ + P DWREKG V PVK+QG CGSCW+FS
Sbjct: 68 SEEFRQVMNGFQNRKPRKGKVFQEPL--FYEAPRSVDWREKGYVTPVKNQGQCGSCWAFS 125
Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
TGALEG F TG+L+SLSEQ LVDC + GCNGGLM+ AF+Y GG
Sbjct: 126 ATGALEGQMFRKTGRLISLSEQNLVDCSGPQ-------GNEGCNGGLMDYAFQYVQDNGG 178
Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
L EE YPY T+ +CK++ A+ A F + E + + GP++VAI+A +
Sbjct: 179 LDSEESYPYEATE--ESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGH 236
Query: 293 --MQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
Y G+ CS +DHGVL+VGYG + YW++KNSWGE WG G
Sbjct: 237 ESFLFYKEGIYFEPDCSSEDMDHGVLVVGYG---FESTESDNNKYWLVKNSWGEEWGMGG 293
Query: 350 YYKICRGR-NVCGVDSMVS 367
Y K+ + R N CG+ S S
Sbjct: 294 YVKMAKDRRNHCGIASAAS 312
|
| >d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 | Back information, alignment and structure |
|---|
| >d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 | Back information, alignment and structure |
|---|
| >d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
| >d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 | Back information, alignment and structure |
|---|
| >d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 | Back information, alignment and structure |
|---|
| >d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 | Back information, alignment and structure |
|---|
| >d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
| >d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 | Back information, alignment and structure |
|---|
| >d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 | Back information, alignment and structure |
|---|
| >d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 | Back information, alignment and structure |
|---|
| >d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 | Back information, alignment and structure |
|---|
| >d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 | Back information, alignment and structure |
|---|
| >d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 | Back information, alignment and structure |
|---|
| >d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 | Back information, alignment and structure |
|---|
| >d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 | Back information, alignment and structure |
|---|
| >d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 | Back information, alignment and structure |
|---|
| >d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
| >d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 | Back information, alignment and structure |
|---|
| >d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 | Back information, alignment and structure |
|---|
| >d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 453 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 373 | |||
| d1cs8a_ | 316 | (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| d1xkga1 | 302 | Major mite fecal allergen der p 1 {House-dust mite | 100.0 | |
| d1m6da_ | 214 | Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| g8pch.1 | 228 | Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} | 100.0 | |
| d2h7ja1 | 217 | (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| d2r6na1 | 215 | (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| g1k3b.1 | 233 | Cathepsin C (dipeptidyl peptidase I), catalytic do | 100.0 | |
| d1yala_ | 218 | Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} | 100.0 | |
| d1fh0a_ | 221 | (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| d1cqda_ | 216 | Proline-specific cysteine protease {Ginger rhizome | 100.0 | |
| d2oula1 | 241 | Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} | 100.0 | |
| d1me4a_ | 215 | Cruzain {Trypanosoma cruzi [TaxId: 5693]} | 100.0 | |
| d1ppoa_ | 216 | Caricain (protease omega) {Papaya (Carica papaya) | 100.0 | |
| d1deua_ | 275 | (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| d1aeca_ | 218 | Actinidin {Chinese gooseberry or kiwifruit (Actini | 100.0 | |
| d1khqa_ | 212 | Papain {Papaya (Carica papaya) [TaxId: 3649]} | 100.0 | |
| d1o0ea_ | 208 | Ervatamin C {East indian rosebay (Ervatamia corona | 100.0 | |
| d1iwda_ | 215 | Ervatamin B {Adam's apple (Ervatamia coronaria) [T | 100.0 | |
| d1gmya_ | 254 | (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| d1s4va_ | 224 | Vignain (bean endopeptidase) {Castor bean (Ricinus | 100.0 | |
| d3gcba_ | 458 | Bleomycin hydrolase {Baker's yeast (Saccharomyces | 99.75 | |
| d2cb5a_ | 453 | Bleomycin hydrolase {Human (Homo sapiens) [TaxId: | 99.68 | |
| d1pxva_ | 183 | Staphopain SspB {Staphylococcus aureus [TaxId: 128 | 96.17 | |
| d1cv8a_ | 173 | Staphopain StpA {Staphylococcus aureus [TaxId: 128 | 95.79 |
| >d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Papain-like domain: (Pro)cathepsin L species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-78 Score=575.81 Aligned_cols=300 Identities=40% Similarity=0.729 Sum_probs=258.6
Q ss_pred hHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHHHHHhcCC----CCCeeeecccCCCCChHHHhhhhcccccccCCCC
Q 017318 56 AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPK 131 (373)
Q Consensus 56 ~~~~F~~f~~~~~K~Y~~~eE~~~R~~iF~~Nl~~i~~~n~~----~~s~~~g~n~FaDlt~~Ef~~~~~g~~~~~~~~~ 131 (373)
.+.+|++||++|+|+|.+ +|+.+|+.||.+|+++|++||++ ..+|++|+|+|+|||++||.+.+++.........
T Consensus 8 l~~~F~~f~~~~~K~Y~~-~ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~~~~~~~~ 86 (316)
T d1cs8a_ 8 LEAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKG 86 (316)
T ss_dssp GHHHHHHHHHHTTCCCCT-THHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCSCC
T ss_pred HHHHHHHHHHHhCCcCCC-HHHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhccccccccccC
Confidence 478999999999999987 56689999999999999999974 4689999999999999999998876644321111
Q ss_pred CCCCCCCCCCCCCCCeeecCcCCCCCccccCCCCcchHHHHHHHHHHHHHHHhcCCccccCHhHhhhcCCCCCCCCCCCC
Q 017318 132 DADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSC 211 (373)
Q Consensus 132 ~~~~~~~~~~~~lP~~~Dwr~~g~vtpVkdQg~cGsCwAfA~~~alE~~~~~~~g~~~~LS~q~l~dc~~~~~~~~~~~~ 211 (373)
.........+||++||||++|+|+||||||.||||||||+++++|++++++++..+.||+|+|+||+.. .+
T Consensus 87 --~~~~~~~~~~lP~s~Dwr~~g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~lvdC~~~-------~~ 157 (316)
T d1cs8a_ 87 --KVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGP-------QG 157 (316)
T ss_dssp --EECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGG-------GT
T ss_pred --ccccCcccccCCCceECCcCCcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhhhhcccc-------cc
Confidence 111112345899999999999999999999999999999999999999999999999999999999864 24
Q ss_pred CCCCCCCchHHHHHHHHHcCCCCCCCCcCCCCCCCCCCCcCCCCCceEEEeeeeeeCchHHHHHHHHHhCCCeEEEEEcc
Q 017318 212 DSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291 (373)
Q Consensus 212 ~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~~C~~~~~~~~~~i~~~~~i~~~~~~ik~~l~~~gPV~v~i~~~ 291 (373)
+.+|.||.+..|+.|+...+++.+|..|||.+.. ..|..........+..+.....+++.|+++|+.+|||++++++.
T Consensus 158 ~~~c~gg~~~~a~~y~~~~g~~~~e~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gpv~v~i~~~ 235 (316)
T d1cs8a_ 158 NEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATE--ESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAG 235 (316)
T ss_dssp CCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSC--CCCCCCGGGEEECCCCEEECCSCHHHHHHHHHHHCCEEEEECCC
T ss_pred CCCCCCCchHHHHHHHHhcCcccccccccccccc--cccccccccccccccccccccCcHHHHHHHHHHhCCeEEEEEec
Confidence 7899999999999999999788999999999887 77876666666666677777778999999999999999999886
Q ss_pred c--cccccCceecCCCCCCC-CCeEEEEEEEeccCCCCCCCCCCCEEEEEcCCCCCCCCCcEEEEEcCC-CeecccCcee
Q 017318 292 Y--MQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367 (373)
Q Consensus 292 ~--f~~y~~Gi~~~~~c~~~-~~HaV~iVGyg~~~~~~~~~~g~~ywiikNSWG~~WGe~GY~~i~r~~-n~CGi~~~~~ 367 (373)
. |++|.+|||....|+.. ++|||+|||||.+.. ..++++|||||||||++|||+|||||+||. |+|||++.++
T Consensus 236 ~~~f~~y~~Gi~~~~~c~~~~~nHaV~iVGyG~d~~---~~~g~~YWIikNSWG~~WGe~GY~ri~r~~~n~CGI~~~~~ 312 (316)
T d1cs8a_ 236 HESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFEST---ESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAAS 312 (316)
T ss_dssp SHHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECC---SSCCEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCE
T ss_pred cchhccccCCcccCCCCCCCcCCEEEEEEEEccccc---CCCCCeEEEEEeCCCCCcccCCEEEEeeCCCCcCccCCeee
Confidence 4 89999999998889765 899999999997621 236789999999999999999999999986 8999999998
Q ss_pred eEE
Q 017318 368 TVA 370 (373)
Q Consensus 368 ~~~ 370 (373)
++.
T Consensus 313 yP~ 315 (316)
T d1cs8a_ 313 YPT 315 (316)
T ss_dssp EEC
T ss_pred eee
Confidence 764
|
| >d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} | Back information, alignment and structure |
|---|
| >d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} | Back information, alignment and structure |
|---|
| >d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} | Back information, alignment and structure |
|---|
| >d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
| >d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} | Back information, alignment and structure |
|---|
| >d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} | Back information, alignment and structure |
|---|
| >d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} | Back information, alignment and structure |
|---|
| >d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} | Back information, alignment and structure |
|---|
| >d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} | Back information, alignment and structure |
|---|
| >d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} | Back information, alignment and structure |
|---|
| >d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|