Citrus Sinensis ID: 017338

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370---
Protein Sequence
MASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETSS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccEEccccccccccccccccccccHHHHHcccccccccccccccccccccHHHHHHHccccccEEEEEEEEcccccccHHHHHHHccccccEEEccccccccccccccccccHHHHHHHHHHcccccccEEEEEcccccccHHHHHHHHHHHccccEEEccccHHHHHHccccccccccccHHHHHHHHHHHHHHHHcccccccccEEEEccccccccHHHHHHHHHccccEEEccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccEEEEcccHHHHHHHHHHHHHcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHccccEEEcccccccHHcccccccccccccHHHHcccccccccccccccccccccccccccccccccccHHHHHHHcccccEEEEEcccccccccccHHHHHHHcEcccEEEcccccccccccccccccccHHHHHHHHHccccccccEEEEEcccccccHHHHHHHHHHcccccEEEEEcHHHHHHHcccccEcccccccccccHHHHHHHHHHHccccccccEEEEEccHHHHccHHHHHHHHHccccEEEEcccccccccccccccccccccEccccEEccHHHHEEHHHccEEcccHHHHHHccccccccEEEEEcccccHHHHHHHHHHHcccccEEEcccHHHHHccccccccEccc
Coil and Loop (DISEMBL)
MASSLFTRRLVHSSFSISYKPQVFTSLLNkklfysrpkhthttlktsssqspcvmsslaagrradystlsvspkepvvsVDWLhanlrepdlkvldaswympdeqrnpfqeyqvahipgalffdvdgvadrttnlphmlpsEEAFAAAVSALGlenkdglvvydgKGIFSAARVWWMFRVFGHDrvwvldgglprwrasgydvessasGDAILKASAASEAIEKVYqgqvvgpttfqtkfqphLIWTLEQVKRNIEEGTYQLVDarskarfdgdapeprkgirsghvpgskcipfpqmldasqtllpaDELKKRFEQegislekpvvtaCGTGVTACILALGLnrlgkhdvavydgswtewgaqpdtpvetss
Flexible Loop (DISEMBL)
masslftrrlvhssfsisykpqVFTSLLNKKLFYSRPKHThttlktsssqspCVMSSLAAGRRADystlsvspkepvVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQlvdarskarfdgdapeprkgirsghvpGSKCIPFPQMLDASQTLLPADELKKRFEQEGislekpvvtacGTGVTACILALGLNRLGKHDVAVYDGSwtewgaqpdtpvetss
Low Complexity Region (SEG)
MASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPkhthttlktsssqsPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETSS
Disordered region (IsUnstruct)
******TRRLVHSSFSISYKPQVFTSLLNKKLFYS****************************************PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE*****DAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVD****************************************************QEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWG***********
Disordered Region (DISOPRED)
*************************SLLNKK********************************************PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPV****
Disordered Region (DISEMBL)
********RLVHSSFSISYKPQVFTSLLNKKLFYSRP*******************SLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG*********DAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ*********
Disordered Region (DISPRO)
**SSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTS***************************EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPV****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	373	2.2.26 [Sep-21-2011]
O64530	379	Thiosulfate/3-mercaptopyr	yes	no	0.991	0.976	0.714	1e-161
Q24JL3	342	Thiosulfate/3-mercaptopyr	no	no	0.852	0.929	0.734	1e-143
P25325	297	3-mercaptopyruvate sulfur	yes	no	0.707	0.888	0.412	1e-59
P97532	297	3-mercaptopyruvate sulfur	yes	no	0.721	0.905	0.412	6e-59
Q99J99	297	3-mercaptopyruvate sulfur	yes	no	0.721	0.905	0.406	2e-58
P58388	281	3-mercaptopyruvate sulfur	N/A	no	0.726	0.964	0.391	2e-56
P31142	281	3-mercaptopyruvate sulfur	N/A	no	0.726	0.964	0.391	2e-56
P46635	297	Thiosulfate sulfurtransfe	no	no	0.726	0.912	0.413	5e-54
P24329	297	Thiosulfate sulfurtransfe	no	no	0.726	0.912	0.410	1e-53
P00586	297	Thiosulfate sulfurtransfe	no	no	0.705	0.885	0.414	7e-53

>sp|O64530|STR1_ARATH Thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial OS=Arabidopsis thaliana GN=STR1 PE=1 SV=1

 Score =  568 bits (1465), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 268/375 (71%), Positives = 312/375 (83%), Gaps = 5/375 (1%)

Query: 1   MASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTH----TTLKTSSSQSPCVMS 56
           MAS+LF+R  + +S  +   P +   + N   F SR  H+     +T   S++ +   M+
Sbjct: 1   MASTLFSRTFLAASHRL-ITPSLPQKIFNPATFLSRSLHSQLGSASTAYKSTTWARRAMA 59

Query: 57  SLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAH 116
           S     +A YST SVS  EPVVSVDWLHANLREPDLK+LDASWYMPDEQRNP QEYQVAH
Sbjct: 60  STGVETKAGYSTSSVSTSEPVVSVDWLHANLREPDLKILDASWYMPDEQRNPIQEYQVAH 119

Query: 117 IPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWW 176
           IP ALFFD+DG++DR T+LPHMLP+EEAFAA  SALG++NKD +VVYDGKGIFSAARVWW
Sbjct: 120 IPRALFFDLDGISDRKTSLPHMLPTEEAFAAGCSALGIDNKDEVVVYDGKGIFSAARVWW 179

Query: 177 MFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTF 236
           MFRVFGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEK+YQGQ V P TF
Sbjct: 180 MFRVFGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKIYQGQTVSPITF 239

Query: 237 QTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFP 296
           QTKFQPHL+WTL+QVK N+E+ TYQ +DARSKARFDG APEPRKGIRSGH+PGSKCIPFP
Sbjct: 240 QTKFQPHLVWTLDQVKNNMEDPTYQHIDARSKARFDGTAPEPRKGIRSGHIPGSKCIPFP 299

Query: 297 QMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDG 356
           QM D+  TLLPA+ELKKRF+QE ISL+KP++ +CGTGVTACILA+GL+RLGK DV +YDG
Sbjct: 300 QMFDSCNTLLPAEELKKRFDQEDISLDKPIMASCGTGVTACILAMGLHRLGKTDVPIYDG 359

Query: 357 SWTEWGAQPDTPVET 371
           SWTEW  QPD P+E+
Sbjct: 360 SWTEWATQPDLPIES 374

Catalyzes the transfer of a sulfur ion from a donor to cyanide or to other thiol compounds. Substrate preference is 3-mercaptopyruvate > thiosulfate. Involved in embryo and seed development.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 8EC: .EC: 1EC: .EC: 2

>sp|Q24JL3|STR2_ARATH Thiosulfate/3-mercaptopyruvate sulfurtransferase 2 OS=Arabidopsis thaliana GN=STR2 PE=1 SV=1

 Score =  506 bits (1304), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 235/320 (73%), Positives = 274/320 (85%), Gaps = 2/320 (0%)

Query: 54  VMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ 113
           VM+S  +  +A+Y+ +S +  EPVVSVDWLH+NL + D+KVLDASWYM  EQRNP QEYQ
Sbjct: 24  VMASSGSEAKANYAPISTN--EPVVSVDWLHSNLGDADIKVLDASWYMAHEQRNPIQEYQ 81

Query: 114 VAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAAR 173
           VAHIPGALFFD++G+ADR TNL HMLPSEEAFAA  SALG+EN DG+VVYDG G+FSAAR
Sbjct: 82  VAHIPGALFFDLNGIADRKTNLRHMLPSEEAFAAGCSALGIENNDGVVVYDGMGLFSAAR 141

Query: 174 VWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP 233
           VWWMFRVFGHD+VWVLDGGLP+WRASGYDVESS S DAILKASAA+EAIEK+YQGQ + P
Sbjct: 142 VWWMFRVFGHDKVWVLDGGLPKWRASGYDVESSVSNDAILKASAATEAIEKIYQGQTISP 201

Query: 234 TTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCI 293
            TFQTKF+PHL+  L+QVK NIE+ TYQ +DARSKARFDG APEP KG+ SGH+PGSKC+
Sbjct: 202 ITFQTKFRPHLVLALDQVKENIEDKTYQHIDARSKARFDGIAPEPWKGLPSGHIPGSKCV 261

Query: 294 PFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAV 353
           PFP M D+SQTLLPA+ELKK+FEQE ISL+ P+  +CGTGVTACILALGL RLGK +VA+
Sbjct: 262 PFPLMFDSSQTLLPAEELKKQFEQEDISLDSPIAASCGTGVTACILALGLYRLGKTNVAI 321

Query: 354 YDGSWTEWGAQPDTPVETSS 373
           YDGSWTEW   P+ P+  SS
Sbjct: 322 YDGSWTEWATAPNLPIVGSS 341

Catalyzes the transfer of a sulfur ion from a donor to cyanide or to other thiol compounds. Substrate preference is 3-mercaptopyruvate > thiosulfate. Involved in embryo and seed development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|P25325|THTM_HUMAN 3-mercaptopyruvate sulfurtransferase OS=Homo sapiens GN=MPST PE=1 SV=3

 Score =  230 bits (587), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 120/291 (41%), Positives = 161/291 (55%), Gaps = 27/291 (9%)

Query: 77  VVSVDWLHANLREPD----LKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  W+   LR P     L++LDASWY+P   R+  +E++  HIPGA FFD+D  +DRT
Sbjct: 10  LVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRT 69

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
           +   HMLP  E FA     LG+     +V+YD   +G++SA RVWWMFR FGH  V +LD
Sbjct: 70  SPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLD 129

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GGL  W      + S  S  A                     P  F+ +  P  I T E 
Sbjct: 130 GGLRHWLRQNLPLSSGKSQPA---------------------PAEFRAQLDPAFIKTYED 168

Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 310
           +K N+E   +Q+VD+R+  RF G  PEPR GI  GH+PG+  IPF   L         +E
Sbjct: 169 IKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEE 228

Query: 311 LKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 361
           ++  F+++ + L KP+V  CG+GVTAC +ALG    GK DV +YDGSW EW
Sbjct: 229 IRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEW 279

Transfer of a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. May have a role in cyanide degradation or in thiosulfate biosynthesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|P97532|THTM_RAT 3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus GN=Mpst PE=1 SV=3

 Score =  228 bits (581), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 123/298 (41%), Positives = 167/298 (56%), Gaps = 29/298 (9%)

Query: 77  VVSVDWLHANLREPD----LKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  W+   L+ P     LK+LDASWY+P   R+  +E++  HIPGA FFD+D  +D T
Sbjct: 10  LVSAQWVAEALKSPRASQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSDHT 69

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
           +   HMLPS   FA    +LG+     +V+YDG  +G++SA RVWWMFR FGH  V +LD
Sbjct: 70  SPYDHMLPSATHFADYAGSLGVSAATHVVIYDGSDQGLYSAPRVWWMFRAFGHHSVSLLD 129

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W +    + S  S          SE            P  F  +  P  I T E 
Sbjct: 130 GGFRYWLSQNLPISSGKS---------PSE------------PAEFCAQLDPSFIKTHED 168

Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 310
           +  N++   +Q+VDAR+  RF G  PEPR GI  GH+PGS  IPF + L +       +E
Sbjct: 169 ILENLDARRFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTSEGLEKSPEE 228

Query: 311 LKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW--GAQPD 366
           +++ F+++ + L KP+V  CG+GVTAC + LG    GK DV VYDGSW EW   AQP+
Sbjct: 229 IQRLFQEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKPDVPVYDGSWVEWYMRAQPE 286

Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. May have a role in cyanide degradation or in thiosulfate biosynthesis.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|Q99J99|THTM_MOUSE 3-mercaptopyruvate sulfurtransferase OS=Mus musculus GN=Mpst PE=1 SV=3

 Score =  226 bits (575), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 121/298 (40%), Positives = 162/298 (54%), Gaps = 29/298 (9%)

Query: 77  VVSVDWLHANLREPD----LKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  W+   L+ P     LK+LDASWY+P   R+  +E++  HIPGA FFD+D  +D T
Sbjct: 10  LVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSDHT 69

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
           +   HMLP+   FA    +LG+     +V+YDG  +G +SA RVWWMFR FGH  V +LD
Sbjct: 70  SPYDHMLPNATHFADYAGSLGVSAATHVVIYDGSDQGPYSAPRVWWMFRAFGHHSVSLLD 129

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W      + S  S                        P  F  +  P  I T E 
Sbjct: 130 GGFRHWLNQNLPISSGKSHSE---------------------PAEFSAQLDPSFIKTHED 168

Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 310
           +  N++   +Q+VDAR+  RF G  PEPR GI  GH+PGS  IPF + L         +E
Sbjct: 169 ILENLDARRFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEE 228

Query: 311 LKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW--GAQPD 366
           +K+ F+++ + L KP+V  CG+GVTAC + LG    GK DV VYDGSW EW   AQP+
Sbjct: 229 IKRLFKEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKSDVPVYDGSWVEWYMRAQPE 286

Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. May have a role in cyanide degradation or in thiosulfate biosynthesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|P58388|THTM_ECO57 3-mercaptopyruvate sulfurtransferase OS=Escherichia coli O157:H7 GN=sseA PE=3 SV=2

 Score =  219 bits (559), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 115/294 (39%), Positives = 166/294 (56%), Gaps = 23/294 (7%)

Query: 78  VSVDWLHANLREPDLKVLDASWYMP-DEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           V  DWL  ++ +P+++++DA    P  E RN  QEY   HIPGA+FFD++ ++D T+ LP
Sbjct: 7   VGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLP 66

Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
           HMLP  E FA A+  LG+     L+VYD   +FSA R WWM R FG ++V +L GGL  W
Sbjct: 67  HMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGW 126

Query: 197 RASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIE 256
           +            D +L    A E  E            F   F P  +  +  V     
Sbjct: 127 QR-----------DDLLLEEGAVELPEG----------EFNAAFNPEAVVKVTDVLLASH 165

Query: 257 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE 316
           E T Q++DAR  ARF+ +  EPR G+R GH+PG+  +P+ +++   + L   DEL   F 
Sbjct: 166 ENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGE-LKTTDELDAIFF 224

Query: 317 QEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE 370
             G+S +KP++ +CG+GVTA ++ L L  L   +V +YDG+W+EWGA+ D PVE
Sbjct: 225 GRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVE 278

Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity.

Escherichia coli O157:H7 (taxid: 83334)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|P31142|THTM_ECOLI 3-mercaptopyruvate sulfurtransferase OS=Escherichia coli (strain K12) GN=sseA PE=1 SV=3

 Score =  219 bits (558), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 115/294 (39%), Positives = 166/294 (56%), Gaps = 23/294 (7%)

Query: 78  VSVDWLHANLREPDLKVLDASWYMP-DEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           V  DWL  ++ +P+++++DA    P  E RN  QEY   HIPGA+FFD++ ++D T+ LP
Sbjct: 7   VGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLP 66

Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
           HMLP  E FA A+  LG+     L+VYD   +FSA R WWM R FG ++V +L GGL  W
Sbjct: 67  HMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGW 126

Query: 197 RASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIE 256
           +            D +L    A E  E            F   F P  +  +  V     
Sbjct: 127 QR-----------DDLLLEEGAVELPEG----------EFNAAFNPEAVVKVTDVLLASH 165

Query: 257 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE 316
           E T Q++DAR  ARF+ +  EPR G+R GH+PG+  +P+ +++   + L   DEL   F 
Sbjct: 166 ENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGE-LKTTDELDAIFF 224

Query: 317 QEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE 370
             G+S +KP++ +CG+GVTA ++ L L  L   +V +YDG+W+EWGA+ D PVE
Sbjct: 225 GRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVE 278

Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity (130-fold lower). Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity.

Escherichia coli (strain K12) (taxid: 83333)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|P46635|THTR_CRIGR Thiosulfate sulfurtransferase OS=Cricetulus griseus GN=TST PE=2 SV=2

 Score =  211 bits (538), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 125/302 (41%), Positives = 162/302 (53%), Gaps = 31/302 (10%)

Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EYQ  H+PGA FFD++   D T
Sbjct: 10  LVSTKWLAESIRSGSLGPGLRVLDASWYSPG-TRQARKEYQERHVPGASFFDIEECRDTT 68

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 69  SPYEMMLPSEAHFADYVGSLGISNDTHVVVYDGDNLGSFYAPRVWWMFRVFGHRTVSVLN 128

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 129 GGFRNWLKEGHPVTSEPSRPE---------------------PAVFKATLDRSLLKTYEQ 167

Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPR-KGIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           V  N++   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 168 VLENLQSKRFQLVDSRAQGRYLGTEPEPDIVGLDSGHIRGSANMPFMNFLTEDGFEKSPE 227

Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ--PDT 367
           EL+  F+ + + L +P++  C  GVTAC +AL     GK DVAVYDGSW+EW  Q  P+T
Sbjct: 228 ELRAIFQDKKVDLSQPLIATCRKGVTACHIALAAYLCGKPDVAVYDGSWSEWFHQAPPET 287

Query: 368 PV 369
            V
Sbjct: 288 RV 289

Together with MRPL18, acts as a mitochondrial import factor for the cytosolic 5S rRNA. Only the nascent unfolded cytoplasmic form is able to bind to the 5S rRNA (By similarity). Formation of iron-sulfur complexes and cyanide detoxification. Binds molecular oxygen and sulfur.

Cricetulus griseus (taxid: 10029)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

>sp|P24329|THTR_RAT Thiosulfate sulfurtransferase OS=Rattus norvegicus GN=Tst PE=1 SV=3

 Score =  210 bits (534), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/302 (41%), Positives = 160/302 (52%), Gaps = 31/302 (10%)

Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EYQ  H+PGA FFD++   D T
Sbjct: 10  LVSTKWLAESIRSGKVGPSLRVLDASWYSPG-TRQARKEYQERHVPGASFFDIEECRDTT 68

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  F   V  LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 69  SPYEMMLPSEAHFGDYVGNLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 128

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 129 GGFRNWLKEGHPVTSEPSRPE---------------------PAVFKATLNRSLLKTYEQ 167

Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           V  N++   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 168 VLENLQSKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNVPFMNFLTEDGFEKSPE 227

Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW--GAQPDT 367
           EL+  F+ + + L +P++  C  GVTAC +AL     GK DVAVYDGSW+EW   A P+T
Sbjct: 228 ELRAIFQDKKVDLSQPLIATCRKGVTACHIALAAYLCGKPDVAVYDGSWSEWFRRAPPET 287

Query: 368 PV 369
            V
Sbjct: 288 RV 289

Together with MRPL18, acts as a mitochondrial import factor for the cytosolic 5S rRNA. Only the nascent unfolded cytoplasmic form is able to bind to the 5S rRNA (By similarity). Involved in the formation of iron-sulfur complexes, cyanide detoxification or modification of sulfur-containing enzymes. Other thiol compounds, besides cyanide, can act as sulfur ion acceptors. Also has weak mercaptopyruvate sulfurtransferase (MST) activity.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

>sp|P00586|THTR_BOVIN Thiosulfate sulfurtransferase OS=Bos taurus GN=TST PE=1 SV=3

 Score =  208 bits (529), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 121/292 (41%), Positives = 155/292 (53%), Gaps = 29/292 (9%)

Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 10  LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 68

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 69  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 128

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 129 GGFRNWLKEGHPVTSEPSRPE---------------------PAIFKATLNRSLLKTYEQ 167

Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           V  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 168 VLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPE 227

Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 361
           EL+  FE + + L KP++  C  GVTAC +AL     GK DVA+YDGSW EW
Sbjct: 228 ELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEW 279

Together with MRPL18, acts as a mitochondrial import factor for the cytosolic 5S rRNA. Only the nascent unfolded cytoplasmic form is able to bind to the 5S rRNA (By similarity). Formation of iron-sulfur complexes and cyanide detoxification. Binds molecular oxygen and sulfur.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	373
225465012	380	PREDICTED: 3-mercaptopyruvate sulfurtran	0.997	0.978	0.790	1e-176
255544614	376	thiosulfate sulfertansferase, putative [	0.994	0.986	0.798	1e-175
118484746	372	unknown [Populus trichocarpa]	0.981	0.983	0.801	1e-174
388492146	384	unknown [Lotus japonicus]	0.997	0.968	0.782	1e-174
224096608	372	predicted protein [Populus trichocarpa]	0.981	0.983	0.798	1e-173
4406372	375	thiosulfate sulfurtransferase [Datisca g	0.991	0.986	0.784	1e-172
356525750	379	PREDICTED: 3-mercaptopyruvate sulfurtran	0.991	0.976	0.766	1e-169
358347396	381	Mercaptopyruvate sulfurtransferase-like	0.994	0.973	0.772	1e-168
449497667	377	PREDICTED: thiosulfate/3-mercaptopyruvat	0.997	0.986	0.743	1e-164
449464498	377	PREDICTED: thiosulfate/3-mercaptopyruvat	0.997	0.986	0.740	1e-164

>gi|225465012|ref|XP_002264748.1| PREDICTED: 3-mercaptopyruvate sulfurtransferase [Vitis vinifera] gi|147820684|emb|CAN69823.1| hypothetical protein VITISV_030676 [Vitis vinifera] gi|297736153|emb|CBI24191.3| unnamed protein product [Vitis vinifera]

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 295/373 (79%), Positives = 327/373 (87%), Gaps = 1/373 (0%)

Query: 1   MASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVMSSLAA 60
            A +LF  RL+ SS ++  KPQ+FTS  NK+ FYSRP   +   + SS  S C M+S  +
Sbjct: 6   FARTLFGNRLIRSSLALYQKPQIFTSFFNKRPFYSRPNAVYLVYR-SSGFSTCAMASSTS 64

Query: 61  GRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGA 120
           G R+ +ST SVSP EPVVSVDWLHAN+REPDLKVLDASWYMPDEQRNP QEYQVAHIPGA
Sbjct: 65  GTRSSFSTQSVSPNEPVVSVDWLHANIREPDLKVLDASWYMPDEQRNPLQEYQVAHIPGA 124

Query: 121 LFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRV 180
           LFFDVDG++D+TTNLPHMLPSEEAFAAAVSALG+ENKDG+VVYDGKGIFSAARVWWMFRV
Sbjct: 125 LFFDVDGISDQTTNLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRV 184

Query: 181 FGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKF 240
           FGH+R+WVLDGGLP WRASG+DVESSASGDAILKASAASEAIEKVY+ Q VGP TFQT+F
Sbjct: 185 FGHERIWVLDGGLPTWRASGFDVESSASGDAILKASAASEAIEKVYRRQAVGPITFQTRF 244

Query: 241 QPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLD 300
           QPHL+WTLEQV +NIE  T+Q +DARSKARFDG APEPRKGIRSGHVP SKCIPF QMLD
Sbjct: 245 QPHLVWTLEQVNQNIENKTHQHIDARSKARFDGIAPEPRKGIRSGHVPSSKCIPFSQMLD 304

Query: 301 ASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTE 360
           +SQ LLPADELKKRF+QEGISL+ PVVT+CGTGVTACILALGL+RLGK DV VYDGSWTE
Sbjct: 305 SSQKLLPADELKKRFDQEGISLDSPVVTSCGTGVTACILALGLHRLGKSDVTVYDGSWTE 364

Query: 361 WGAQPDTPVETSS 373
           WGA PDTPV TSS
Sbjct: 365 WGAHPDTPVATSS 377

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544614|ref|XP_002513368.1| thiosulfate sulfertansferase, putative [Ricinus communis] gi|223547276|gb|EEF48771.1| thiosulfate sulfertansferase, putative [Ricinus communis]

 Score =  620 bits (1598), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 301/377 (79%), Positives = 329/377 (87%), Gaps = 6/377 (1%)

Query: 1   MASSLFTR-----RLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVM 55
           MA++ FTR     R +H S S+S K Q F SL NK+ FY R    HT+ +TS    P V+
Sbjct: 1   MAAAAFTRTLLGHRFIHCSQSLSLKIQTFPSLFNKRPFYIRADPVHTSHRTSG-WVPRVI 59

Query: 56  SSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVA 115
           +S   G +A YST S+   EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNP QEYQVA
Sbjct: 60  ASTMVGTKASYSTQSLPANEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPIQEYQVA 119

Query: 116 HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVW 175
           HIPGALFFDVDG++DR+TNLPHMLPSEEAF+AAVSALG+ENKDGLVVYDGKGIFSAARVW
Sbjct: 120 HIPGALFFDVDGISDRSTNLPHMLPSEEAFSAAVSALGIENKDGLVVYDGKGIFSAARVW 179

Query: 176 WMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTT 235
           WMFRVFGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVY GQ VGP T
Sbjct: 180 WMFRVFGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYHGQAVGPIT 239

Query: 236 FQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPF 295
           FQTKFQ HL+WTLEQVK+NIE+ T+Q +DARSKARFDG APEPRKGIRSGHVPGSKCIPF
Sbjct: 240 FQTKFQLHLVWTLEQVKKNIEDRTHQHIDARSKARFDGAAPEPRKGIRSGHVPGSKCIPF 299

Query: 296 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYD 355
           PQMLDASQTLLPADELKKRF+QEGISLE PV T+CGTGVTACILALG++RLGK DV VYD
Sbjct: 300 PQMLDASQTLLPADELKKRFDQEGISLESPVFTSCGTGVTACILALGMHRLGKQDVPVYD 359

Query: 356 GSWTEWGAQPDTPVETS 372
           GSWTEWGA PDTPV+TS
Sbjct: 360 GSWTEWGAHPDTPVDTS 376

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118484746|gb|ABK94242.1| unknown [Populus trichocarpa]

 Score =  617 bits (1590), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 299/373 (80%), Positives = 330/373 (88%), Gaps = 7/373 (1%)

Query: 1   MASSLFTRRLVHSSFSISYK-PQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVMSSLA 59
           +  SL   RL+HSSFS+S+K PQ+FTSL   + F  R    HT+ K  S    CV+    
Sbjct: 6   LTKSLLGHRLIHSSFSLSHKTPQIFTSLFPGRTFQKRADPIHTSYK-PSQWVRCVV---- 60

Query: 60  AGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPG 119
            G RA++ST S+S  EPVVSVDWLHANLREPD+KVLDASWYMPDEQRNP QEYQVAHIPG
Sbjct: 61  -GTRANFSTQSLSLNEPVVSVDWLHANLREPDMKVLDASWYMPDEQRNPIQEYQVAHIPG 119

Query: 120 ALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFR 179
           ALFFDVDG+AD+TTNLPHMLPSEEAFAAAVSALG+ENKDGLVVYDGKGIFSAARVWWMFR
Sbjct: 120 ALFFDVDGIADQTTNLPHMLPSEEAFAAAVSALGIENKDGLVVYDGKGIFSAARVWWMFR 179

Query: 180 VFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTK 239
           VFGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ VGP T+QTK
Sbjct: 180 VFGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQTVGPITYQTK 239

Query: 240 FQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQML 299
           FQPHL+WTLEQVK NIE+ T+Q VDARSKARFDG APEPRKGI+SGHVPGSKCIPF Q+L
Sbjct: 240 FQPHLVWTLEQVKSNIEDRTHQHVDARSKARFDGAAPEPRKGIKSGHVPGSKCIPFAQLL 299

Query: 300 DASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWT 359
           D+SQTLLPADELKKRF+QEGISL+ PVVT+CGTGVTACILALGL+RLGK DVAVYDGSWT
Sbjct: 300 DSSQTLLPADELKKRFDQEGISLKSPVVTSCGTGVTACILALGLHRLGKSDVAVYDGSWT 359

Query: 360 EWGAQPDTPVETS 372
           EWGA P+TPV++S
Sbjct: 360 EWGANPETPVDSS 372

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388492146|gb|AFK34139.1| unknown [Lotus japonicus]

 Score =  617 bits (1590), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 295/377 (78%), Positives = 330/377 (87%), Gaps = 5/377 (1%)

Query: 1   MASSLFTR-----RLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVM 55
           MAS+L ++     RLVHSS  ++++P+V +SL  K+++  R    +TT  + +++    M
Sbjct: 3   MASTLLSKMLLGPRLVHSSSFLTHQPRVLSSLFTKRVYCVRAVPAYTTQNSKTTRWASCM 62

Query: 56  SSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVA 115
           +S   GRRA YST SVS  EPVVSVDWL+ NL+EPD+KVLDASWYMPDEQRNP QEYQVA
Sbjct: 63  ASSIVGRRATYSTQSVSTNEPVVSVDWLYDNLKEPDMKVLDASWYMPDEQRNPIQEYQVA 122

Query: 116 HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVW 175
           HIPGALFFDVDG+ADRTTNLPHMLPSEEAFAAAVSALG++NKD +VVYDGKG+FSAARVW
Sbjct: 123 HIPGALFFDVDGIADRTTNLPHMLPSEEAFAAAVSALGIQNKDDVVVYDGKGLFSAARVW 182

Query: 176 WMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTT 235
           WMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS DAILKASAASEAIEKVYQGQ VGP T
Sbjct: 183 WMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYQGQAVGPIT 242

Query: 236 FQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPF 295
           FQTKFQPHL+WTL+QVK+NIEE T+Q +DARSK RFDG APEPRKGIRSGHVPGSKCIPF
Sbjct: 243 FQTKFQPHLVWTLDQVKKNIEEKTHQQLDARSKPRFDGAAPEPRKGIRSGHVPGSKCIPF 302

Query: 296 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYD 355
            Q+LD SQTLLPA ELKKRFEQEGISLE PVVT+CGTGVTACILALGL+RLGK DVAVYD
Sbjct: 303 SQLLDGSQTLLPAAELKKRFEQEGISLESPVVTSCGTGVTACILALGLHRLGKSDVAVYD 362

Query: 356 GSWTEWGAQPDTPVETS 372
           GSWTEWGAQ DTPVET+
Sbjct: 363 GSWTEWGAQSDTPVETT 379

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096608|ref|XP_002310670.1| predicted protein [Populus trichocarpa] gi|222853573|gb|EEE91120.1| predicted protein [Populus trichocarpa]

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 298/373 (79%), Positives = 329/373 (88%), Gaps = 7/373 (1%)

Query: 1   MASSLFTRRLVHSSFSISYK-PQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVMSSLA 59
           +  SL   RL+HSSFS+S+K PQ+FTSL   + F  R    HT+ K  S    CV+    
Sbjct: 6   LTKSLLGHRLIHSSFSLSHKTPQIFTSLFPGRTFQKRADPIHTSYK-PSQWVRCVV---- 60

Query: 60  AGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPG 119
            G RA++ST S+S  EPVV VDWLHANLREPD+KVLDASWYMPDEQRNP QEYQVAHIPG
Sbjct: 61  -GTRANFSTQSLSLNEPVVFVDWLHANLREPDMKVLDASWYMPDEQRNPIQEYQVAHIPG 119

Query: 120 ALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFR 179
           ALFFDVDG+AD+TTNLPHMLPSEEAFAAAVSALG+ENKDGLVVYDGKGIFSAARVWWMFR
Sbjct: 120 ALFFDVDGIADQTTNLPHMLPSEEAFAAAVSALGIENKDGLVVYDGKGIFSAARVWWMFR 179

Query: 180 VFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTK 239
           VFGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ VGP T+QTK
Sbjct: 180 VFGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQTVGPITYQTK 239

Query: 240 FQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQML 299
           FQPHL+WTLEQVK NIE+ T+Q VDARSKARFDG APEPRKGI+SGHVPGSKCIPF Q+L
Sbjct: 240 FQPHLVWTLEQVKSNIEDRTHQHVDARSKARFDGAAPEPRKGIKSGHVPGSKCIPFAQLL 299

Query: 300 DASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWT 359
           D+SQTLLPADELKKRF+QEGISL+ PVVT+CGTGVTACILALGL+RLGK DVAVYDGSWT
Sbjct: 300 DSSQTLLPADELKKRFDQEGISLKSPVVTSCGTGVTACILALGLHRLGKSDVAVYDGSWT 359

Query: 360 EWGAQPDTPVETS 372
           EWGA P+TPV++S
Sbjct: 360 EWGANPETPVDSS 372

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4406372|gb|AAD19957.1| thiosulfate sulfurtransferase [Datisca glomerata]

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 295/376 (78%), Positives = 324/376 (86%), Gaps = 6/376 (1%)

Query: 1   MASSLFTR-----RLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVM 55
           MAS+LF++     RL+  SF ++  PQ FTSL NK+ F+ R    +T  KTS   S  VM
Sbjct: 1   MASTLFSKALSGSRLIRPSFYLTNYPQSFTSLFNKRQFHLRSNPAYTAYKTSDRIS-SVM 59

Query: 56  SSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVA 115
           +S  AG R ++ST S+   EPVVS DWLH+NL+EPDL+VLDASWYMPDEQRNP QEYQVA
Sbjct: 60  ASSVAGTRLEFSTQSLPTNEPVVSADWLHSNLKEPDLRVLDASWYMPDEQRNPLQEYQVA 119

Query: 116 HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVW 175
           HIPGALFFDVDG++DRTT LPHMLPSEEAFAAAVSALG++NKDGLVVYDGKGIFSAARVW
Sbjct: 120 HIPGALFFDVDGISDRTTKLPHMLPSEEAFAAAVSALGIQNKDGLVVYDGKGIFSAARVW 179

Query: 176 WMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTT 235
           WMFRVFGHDRVWVLDGGLPRWRA+GYDVESSAS DAILKASAASE IEK+YQGQ  GP T
Sbjct: 180 WMFRVFGHDRVWVLDGGLPRWRAAGYDVESSASSDAILKASAASEVIEKIYQGQAAGPIT 239

Query: 236 FQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPF 295
           FQTKFQP+LIW LEQVK+NIEE TYQ VDARSK RFDG  PEPRKGIRSGHVPGSKCIPF
Sbjct: 240 FQTKFQPNLIWGLEQVKKNIEEKTYQHVDARSKPRFDGAVPEPRKGIRSGHVPGSKCIPF 299

Query: 296 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYD 355
           PQ+LDASQ LLPADELKKRF+QEGISLE P+VT+CGTGVTACILALGL+RLGK DVAVYD
Sbjct: 300 PQILDASQALLPADELKKRFDQEGISLESPIVTSCGTGVTACILALGLHRLGKSDVAVYD 359

Query: 356 GSWTEWGAQPDTPVET 371
           GSWTEWGA  DTPVET
Sbjct: 360 GSWTEWGAHSDTPVET 375

Source: Datisca glomerata

Species: Datisca glomerata

Genus: Datisca

Family: Datiscaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525750|ref|XP_003531486.1| PREDICTED: 3-mercaptopyruvate sulfurtransferase-like [Glycine max]

 Score =  600 bits (1546), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 292/381 (76%), Positives = 329/381 (86%), Gaps = 11/381 (2%)

Query: 1   MASSLFTR-----RLVHSSFSISYKPQVFTSLLNKKLFYSRP----KHTHTTLKTSSSQS 51
           MAS+LFT+     RL+H    ++++PQ+ +SL +K+LF  R      +T   +KT+   +
Sbjct: 1   MASTLFTKMLLGQRLIHPYSFLTHQPQILSSLFSKRLFCIRAVPVSAYTSQNIKTTG-WA 59

Query: 52  PCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQE 111
           PC M+S + GRRA YST SVS  EPVVSVDWL+ NL+EPD+KVLDASWYMPDEQRNP QE
Sbjct: 60  PC-MASSSVGRRATYSTQSVSTNEPVVSVDWLYDNLKEPDIKVLDASWYMPDEQRNPIQE 118

Query: 112 YQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSA 171
           YQVAHIPGALFFDVDG+ADRTT LPHMLPSEEAFAAAVSALG+ENKD LVVYDGKG+FSA
Sbjct: 119 YQVAHIPGALFFDVDGIADRTTKLPHMLPSEEAFAAAVSALGIENKDDLVVYDGKGLFSA 178

Query: 172 ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVV 231
           ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS DAILKASAASEAIEKVY+GQ V
Sbjct: 179 ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYKGQTV 238

Query: 232 GPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSK 291
           GP TFQTKFQPHL+W ++QVK+NIE+ T+Q +DARSK RFDG   EPRKGIRSGHVPGSK
Sbjct: 239 GPLTFQTKFQPHLVWNIDQVKKNIEDKTHQHIDARSKPRFDGAVQEPRKGIRSGHVPGSK 298

Query: 292 CIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDV 351
           CIPF Q+LD+SQTLLPADELKKRFEQEGIS+E P VT+CGTGVTACILALGL+RLGK DV
Sbjct: 299 CIPFAQLLDSSQTLLPADELKKRFEQEGISVESPAVTSCGTGVTACILALGLHRLGKSDV 358

Query: 352 AVYDGSWTEWGAQPDTPVETS 372
           AVYDGSWTEWGAQ DT V+TS
Sbjct: 359 AVYDGSWTEWGAQSDTLVDTS 379

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358347396|ref|XP_003637743.1| Mercaptopyruvate sulfurtransferase-like protein [Medicago truncatula] gi|355503678|gb|AES84881.1| Mercaptopyruvate sulfurtransferase-like protein [Medicago truncatula]

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 292/378 (77%), Positives = 322/378 (85%), Gaps = 7/378 (1%)

Query: 1   MASSLFTR-----RLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQ-SPCV 54
           MASSLFT+     R +H+S   S+ P + +S  NK+LF  R   T T + T S+  SPC+
Sbjct: 1   MASSLFTKILLRPRSIHTSSFFSHNPPILSSFFNKRLFSIRAVPTSTAVNTKSTGWSPCM 60

Query: 55  MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 114
            SS+ + R A YST S    EPVVSVDWL+ NL+EP +KV+DASWYMPDEQRNP QEYQV
Sbjct: 61  ASSIVS-RTATYSTRSAPSNEPVVSVDWLYDNLKEPAIKVVDASWYMPDEQRNPIQEYQV 119

Query: 115 AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARV 174
           AHIPGALFFDVDG+ADRTTNLPHMLPSEEAFAAAVSALG++NKD LVVYDGKGIFSAARV
Sbjct: 120 AHIPGALFFDVDGIADRTTNLPHMLPSEEAFAAAVSALGIQNKDDLVVYDGKGIFSAARV 179

Query: 175 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT 234
           WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS DAILKASAASEAIEKVYQGQ VGP 
Sbjct: 180 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYQGQAVGPI 239

Query: 235 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIP 294
           TF+TKFQP L+W LEQV +NIEE ++Q VDAR K RFDG APEPRKGIRSGHVPGSKCIP
Sbjct: 240 TFETKFQPQLVWNLEQVTKNIEEKSHQHVDARGKPRFDGIAPEPRKGIRSGHVPGSKCIP 299

Query: 295 FPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVY 354
           F QMLD SQTLLPAD+LKKRF+QEGISLE PVVT+CGTGVTACILALGL+RLGK DV VY
Sbjct: 300 FSQMLDGSQTLLPADDLKKRFDQEGISLESPVVTSCGTGVTACILALGLHRLGKTDVPVY 359

Query: 355 DGSWTEWGAQPDTPVETS 372
           DGSWTEWGA PDTPV+T+
Sbjct: 360 DGSWTEWGAHPDTPVDTA 377

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449497667|ref|XP_004160468.1| PREDICTED: thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial-like [Cucumis sativus]

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 281/378 (74%), Positives = 321/378 (84%), Gaps = 6/378 (1%)

Query: 1   MASSLFTRRLVHSSF--SISY---KPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVM 55
           MAS+L +R L+ + F  SIS+   K Q+  S+ +KKLF  RP         +   S   M
Sbjct: 1   MASTLLSRTLLVNRFAHSISFPSGKTQILPSVFSKKLFQFRPNSASVAYNPTRRFS-SFM 59

Query: 56  SSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVA 115
           +S  AG +A +S+ S+S  +P+VS DWLH+NL+EPDLKVLDASWYMPDEQRNP QEYQVA
Sbjct: 60  ASSVAGAKAHFSSKSLSTDDPIVSPDWLHSNLKEPDLKVLDASWYMPDEQRNPIQEYQVA 119

Query: 116 HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVW 175
           HIPGALFFDVDGV+DRT+ LPHMLPSEEAFAA VSALG+ NKDG+VVYDGKG+FSAARVW
Sbjct: 120 HIPGALFFDVDGVSDRTSKLPHMLPSEEAFAAVVSALGISNKDGVVVYDGKGLFSAARVW 179

Query: 176 WMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTT 235
           WMFRVFGHDR+WVLDGGLP+WR  GYDVESSASGDAILKA+AASEAIEK+YQGQ VGP T
Sbjct: 180 WMFRVFGHDRIWVLDGGLPKWRTLGYDVESSASGDAILKATAASEAIEKIYQGQAVGPIT 239

Query: 236 FQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPF 295
           FQTKFQPHL+W LE+V+ NI E T+QL+DARSKARFDG   EPRKGIRSGHVPGSKCIPF
Sbjct: 240 FQTKFQPHLVWDLEKVQENITERTHQLIDARSKARFDGAVLEPRKGIRSGHVPGSKCIPF 299

Query: 296 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYD 355
           PQMLD+SQ+LLPAD+LKKRFEQEGISLE P+VT+CGTGVTACILALGL+RLGKHDV VYD
Sbjct: 300 PQMLDSSQSLLPADQLKKRFEQEGISLENPIVTSCGTGVTACILALGLHRLGKHDVPVYD 359

Query: 356 GSWTEWGAQPDTPVETSS 373
           GSWTEWGA  DTPV+T+S
Sbjct: 360 GSWTEWGAHSDTPVDTAS 377

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464498|ref|XP_004149966.1| PREDICTED: thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial-like [Cucumis sativus]

 Score =  582 bits (1501), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 280/378 (74%), Positives = 320/378 (84%), Gaps = 6/378 (1%)

Query: 1   MASSLFTRRLVHSSF--SISY---KPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVM 55
           MAS+L +R L+ + F  SIS+   K Q+  S+ +KKLF  RP         +   S   M
Sbjct: 1   MASTLLSRTLLVNRFAHSISFPSGKTQILPSVFSKKLFQFRPNSASVAYNPTRRFS-SFM 59

Query: 56  SSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVA 115
           +S  AG +A +S+ S+S  +P+VS DWLH+NL+EPDLKVLDASWYMPDEQRNP QEYQVA
Sbjct: 60  ASSVAGAKAHFSSKSLSTDDPIVSPDWLHSNLKEPDLKVLDASWYMPDEQRNPIQEYQVA 119

Query: 116 HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVW 175
           HIPGALFFDVDGV+DRT+ LPHMLPSEEAFAA VSALG+ NKDG+VVYDGKG+FSAARVW
Sbjct: 120 HIPGALFFDVDGVSDRTSKLPHMLPSEEAFAAVVSALGISNKDGVVVYDGKGLFSAARVW 179

Query: 176 WMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTT 235
           WMFRVFGHDR+WVLDGGLP+WR  GYDVESSASGDAILKA+AASEAIEK+YQGQ VGP T
Sbjct: 180 WMFRVFGHDRIWVLDGGLPKWRTLGYDVESSASGDAILKATAASEAIEKIYQGQAVGPIT 239

Query: 236 FQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPF 295
           FQTKFQ HL+W LE+V+ NI E T+QL+DARSKARFDG   EPRKGIRSGHVPGSKCIPF
Sbjct: 240 FQTKFQSHLVWDLEKVQENITERTHQLIDARSKARFDGAVLEPRKGIRSGHVPGSKCIPF 299

Query: 296 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYD 355
           PQMLD+SQ+LLPAD+LKKRFEQEGISLE P+VT+CGTGVTACILALGL+RLGKHDV VYD
Sbjct: 300 PQMLDSSQSLLPADQLKKRFEQEGISLENPIVTSCGTGVTACILALGLHRLGKHDVPVYD 359

Query: 356 GSWTEWGAQPDTPVETSS 373
           GSWTEWGA  DTPV+T+S
Sbjct: 360 GSWTEWGAHSDTPVDTAS 377

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	373
TAIR|locus:2207345	379	MST1 "mercaptopyruvate sulfurt	0.991	0.976	0.706	1.9e-145
TAIR|locus:2032800	342	RDH2 "rhodanese homologue 2" [	0.852	0.929	0.734	1e-130
UNIPROTKB|Q608D7	316	sseA "Sulfurtransferase" [Meth	0.364	0.430	0.518	1.1e-70
UNIPROTKB|E1C8D8	293	MPST "Sulfurtransferase" [Gall	0.345	0.440	0.496	1.8e-62
UNIPROTKB|H9L016	267	H9L016 "Sulfurtransferase" [Ga	0.300	0.419	0.535	5.4e-61
ZFIN|ZDB-GENE-030131-9020	302	zgc:162544 "zgc:162544" [Danio	0.439	0.543	0.421	1.1e-60
UNIPROTKB|J3KPV7	317	MPST "Sulfurtransferase" [Homo	0.359	0.422	0.433	4.2e-59
UNIPROTKB|P25325	297	MPST "3-mercaptopyruvate sulfu	0.359	0.451	0.433	4.2e-59
UNIPROTKB|E2RJF7	298	MPST "Sulfurtransferase" [Cani	0.404	0.506	0.433	1.1e-58
RGD|620065	297	Mpst "mercaptopyruvate sulfurt	0.359	0.451	0.441	1.4e-58

TAIR|locus:2207345 MST1 "mercaptopyruvate sulfurtransferase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1421 (505.3 bits), Expect = 1.9e-145, P = 1.9e-145
 Identities = 265/375 (70%), Positives = 304/375 (81%)

Query:     1 MASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPXXXXXXXXXXXXXXPC----VMS 56
             MAS+LF+R  + +S  +   P +   + N   F SR                      M+
Sbjct:     1 MASTLFSRTFLAASHRL-ITPSLPQKIFNPATFLSRSLHSQLGSASTAYKSTTWARRAMA 59

Query:    57 SLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAH 116
             S     +A YST SVS  EPVVSVDWLHANLREPDLK+LDASWYMPDEQRNP QEYQVAH
Sbjct:    60 STGVETKAGYSTSSVSTSEPVVSVDWLHANLREPDLKILDASWYMPDEQRNPIQEYQVAH 119

Query:   117 IPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWW 176
             IP ALFFD+DG++DR T+LPHMLP+EEAFAA  SALG++NKD +VVYDGKGIFSAARVWW
Sbjct:   120 IPRALFFDLDGISDRKTSLPHMLPTEEAFAAGCSALGIDNKDEVVVYDGKGIFSAARVWW 179

Query:   177 MFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTF 236
             MFRVFGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEK+YQGQ V P TF
Sbjct:   180 MFRVFGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKIYQGQTVSPITF 239

Query:   237 QTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFP 296
             QTKFQPHL+WTL+QVK N+E+ TYQ +DARSKARFDG APEPRKGIRSGH+PGSKCIPFP
Sbjct:   240 QTKFQPHLVWTLDQVKNNMEDPTYQHIDARSKARFDGTAPEPRKGIRSGHIPGSKCIPFP 299

Query:   297 QMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDG 356
             QM D+  TLLPA+ELKKRF+QE ISL+KP++ +CGTGVTACILA+GL+RLGK DV +YDG
Sbjct:   300 QMFDSCNTLLPAEELKKRFDQEDISLDKPIMASCGTGVTACILAMGLHRLGKTDVPIYDG 359

Query:   357 SWTEWGAQPDTPVET 371
             SWTEW  QPD P+E+
Sbjct:   360 SWTEWATQPDLPIES 374

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA;ISS;IDA

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0007568 "aging" evidence=ISS

GO:0016784 "3-mercaptopyruvate sulfurtransferase activity" evidence=IDA

GO:0016783 "sulfurtransferase activity" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2032800 RDH2 "rhodanese homologue 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1282 (456.3 bits), Expect = 1.0e-130, P = 1.0e-130
 Identities = 235/320 (73%), Positives = 274/320 (85%)

Query:    54 VMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ 113
             VM+S  +  +A+Y+ +S +  EPVVSVDWLH+NL + D+KVLDASWYM  EQRNP QEYQ
Sbjct:    24 VMASSGSEAKANYAPISTN--EPVVSVDWLHSNLGDADIKVLDASWYMAHEQRNPIQEYQ 81

Query:   114 VAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAAR 173
             VAHIPGALFFD++G+ADR TNL HMLPSEEAFAA  SALG+EN DG+VVYDG G+FSAAR
Sbjct:    82 VAHIPGALFFDLNGIADRKTNLRHMLPSEEAFAAGCSALGIENNDGVVVYDGMGLFSAAR 141

Query:   174 VWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP 233
             VWWMFRVFGHD+VWVLDGGLP+WRASGYDVESS S DAILKASAA+EAIEK+YQGQ + P
Sbjct:   142 VWWMFRVFGHDKVWVLDGGLPKWRASGYDVESSVSNDAILKASAATEAIEKIYQGQTISP 201

Query:   234 TTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCI 293
              TFQTKF+PHL+  L+QVK NIE+ TYQ +DARSKARFDG APEP KG+ SGH+PGSKC+
Sbjct:   202 ITFQTKFRPHLVLALDQVKENIEDKTYQHIDARSKARFDGIAPEPWKGLPSGHIPGSKCV 261

Query:   294 PFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAV 353
             PFP M D+SQTLLPA+ELKK+FEQE ISL+ P+  +CGTGVTACILALGL RLGK +VA+
Sbjct:   262 PFPLMFDSSQTLLPAEELKKQFEQEDISLDSPIAASCGTGVTACILALGLYRLGKTNVAI 321

Query:   354 YDGSWTEWGAQPDTPVETSS 373
             YDGSWTEW   P+ P+  SS
Sbjct:   322 YDGSWTEWATAPNLPIVGSS 341

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA;ISS;IDA

GO:0005739 "mitochondrion" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0016784 "3-mercaptopyruvate sulfurtransferase activity" evidence=IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=IGI

UNIPROTKB|Q608D7 sseA "Sulfurtransferase" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 371 (135.7 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
 Identities = 71/137 (51%), Positives = 92/137 (67%)

Query:   236 FQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPF 295
             FQ +F+P L+  LE +++   E + Q++DARS  RF G  PEPR G+RSGH+PGS+ + F
Sbjct:   179 FQARFRPELVSNLEDLRKAAAERSIQILDARSPGRFAGTEPEPRPGLRSGHIPGSRNLFF 238

Query:   296 PQMLD-ASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVY 354
              +++D  S        L   +   GI L++PV T CGTGVTA ILALGL  LG+ D AVY
Sbjct:   239 QRLIDETSHCFKSVAALAALYRDAGIDLDRPVTTTCGTGVTASILALGLYLLGRTDTAVY 298

Query:   355 DGSWTEWGAQPDTPVET 371
             DGSWTEWG + DTPVET
Sbjct:   299 DGSWTEWGGRTDTPVET 315

GO:0006790 "sulfur compound metabolic process" evidence=ISS

GO:0016784 "3-mercaptopyruvate sulfurtransferase activity" evidence=ISS

UNIPROTKB|E1C8D8 MPST "Sulfurtransferase" [Gallus gallus (taxid:9031)]

 Score = 351 (128.6 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
 Identities = 67/135 (49%), Positives = 89/135 (65%)

Query:    77 VVSVDWLHANLREPD----LKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
             +VS  WL   ++       LKV+DASWY+P  +R+P QE++  HIPGA+FFD+D  +DRT
Sbjct:    10 LVSAKWLSEAIKSKQTGQALKVVDASWYLPKMKRDPKQEFEERHIPGAVFFDIDQCSDRT 69

Query:   133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
             +   HM+P    FA  V  LG+ N   +VVYDG  +G+FSA RVWWMFRVFGH+ V +LD
Sbjct:    70 SPYDHMMPKANEFAEYVGKLGVGNDSHVVVYDGSDQGLFSAPRVWWMFRVFGHEAVSLLD 129

Query:   191 GGLPRWRASGYDVES 205
             GGL  W   G+ + S
Sbjct:   130 GGLKNWLREGFPLSS 144

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

UNIPROTKB|H9L016 H9L016 "Sulfurtransferase" [Gallus gallus (taxid:9031)]

 Score = 337 (123.7 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
 Identities = 61/114 (53%), Positives = 81/114 (71%)

Query:    94 VLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG 153
             V+DASWY+P  +R+P QE++  HIPGA+FFD+D  +DRT+   HM+P  + FA  V  LG
Sbjct:     1 VVDASWYLPKMKRDPKQEFEERHIPGAVFFDIDQCSDRTSPYDHMMPKADEFAEYVGKLG 60

Query:   154 LENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES 205
             + N   +VVYDG  +G+FSA RVWWMFRVFGH+ V +LDGGL  W   G+ + S
Sbjct:    61 VGNDSHVVVYDGSDQGLFSAPRVWWMFRVFGHEAVSLLDGGLKNWLREGFPLSS 114

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

ZFIN|ZDB-GENE-030131-9020 zgc:162544 "zgc:162544" [Danio rerio (taxid:7955)]

 Score = 343 (125.8 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
 Identities = 72/171 (42%), Positives = 100/171 (58%)

Query:    64 ADYSTLSVSPKEPVVSVDWL----HANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPG 119
             A + ++  +    +V+  WL     +N   P+L++LDASWY+P  +RNP  E++  HIPG
Sbjct:     1 AYWMSVMAAQTRALVAARWLADAVKSNRVGPNLRILDASWYLPKMKRNPRAEFEQTHIPG 60

Query:   120 ALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWM 177
             A FFD+D   D+++   HMLP++  FA  V  LG+ N   +VVYD    G FSA RVWWM
Sbjct:    61 ASFFDIDECCDKSSEFDHMLPTKGEFADYVGNLGIGNNTHVVVYDASDFGSFSAPRVWWM 120

Query:   178 FRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAA-SEAIEKVYQ 227
             FRVFGH  V VLDGG   W   G+ V    S  A +  +A+  E+  K Y+
Sbjct:   121 FRVFGHSSVSVLDGGFKNWLKEGHPVSQQYSKPAPVDFNASFKESWVKTYE 171

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|J3KPV7 MPST "Sulfurtransferase" [Homo sapiens (taxid:9606)]

 Score = 315 (115.9 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
 Identities = 59/136 (43%), Positives = 82/136 (60%)

Query:   233 PTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKC 292
             P  F+ +  P  I T E +K N+E   +Q+VD+R+  RF G  PEPR GI  GH+PG+  
Sbjct:   171 PAEFRAQLDPAFIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVN 230

Query:   293 IPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVA 352
             IPF   L         +E++  F+++ + L KP+V  CG+GVTAC +ALG    GK DV 
Sbjct:   231 IPFTDFLSQEGLEKSPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVP 290

Query:   353 VYDGSWTEW--GAQPD 366
             +YDGSW EW   A+P+
Sbjct:   291 IYDGSWVEWYMRARPE 306

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

UNIPROTKB|P25325 MPST "3-mercaptopyruvate sulfurtransferase" [Homo sapiens (taxid:9606)]

 Score = 315 (115.9 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
 Identities = 59/136 (43%), Positives = 82/136 (60%)

Query:   233 PTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKC 292
             P  F+ +  P  I T E +K N+E   +Q+VD+R+  RF G  PEPR GI  GH+PG+  
Sbjct:   151 PAEFRAQLDPAFIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVN 210

Query:   293 IPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVA 352
             IPF   L         +E++  F+++ + L KP+V  CG+GVTAC +ALG    GK DV 
Sbjct:   211 IPFTDFLSQEGLEKSPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVP 270

Query:   353 VYDGSWTEW--GAQPD 366
             +YDGSW EW   A+P+
Sbjct:   271 IYDGSWVEWYMRARPE 286

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

GO:0016784 "3-mercaptopyruvate sulfurtransferase activity" evidence=IEA

GO:0070814 "hydrogen sulfide biosynthetic process" evidence=ISS

GO:0043005 "neuron projection" evidence=ISS

GO:0009636 "response to toxic substance" evidence=TAS

GO:0009440 "cyanate catabolic process" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|E2RJF7 MPST "Sulfurtransferase" [Canis lupus familiaris (taxid:9615)]

 Score = 313 (115.2 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
 Identities = 69/159 (43%), Positives = 91/159 (57%)

Query:    77 VVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
             +VS  W+   LR P     L++LDASWY+P   R+  +E++  HIPGA FFD+D  +DRT
Sbjct:    10 LVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRT 69

Query:   133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
             +   HMLPS E FA     LG+     +VVYD   +G+++A RVWWMFR FGH  V +LD
Sbjct:    70 SPYDHMLPSAEHFAEYAGRLGVGAATHVVVYDASDQGLYAAPRVWWMFRAFGHRTVSLLD 129

Query:   191 GGLPRWRASGYDVESSASGDAILK--ASAASEAIEKVYQ 227
             GGL  W   G  + S  S  A      +A   A  K Y+
Sbjct:   130 GGLRHWLRLGLPLSSGKSRPAPAADFRAALDPAFVKTYE 168

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

RGD|620065 Mpst "mercaptopyruvate sulfurtransferase" [Rattus norvegicus (taxid:10116)]

 Score = 312 (114.9 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
 Identities = 60/136 (44%), Positives = 82/136 (60%)

Query:   233 PTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKC 292
             P  F  +  P  I T E +  N++   +Q+VDAR+  RF G  PEPR GI  GH+PGS  
Sbjct:   151 PAEFCAQLDPSFIKTHEDILENLDARRFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVN 210

Query:   293 IPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVA 352
             IPF + L +       +E+++ F+++ + L KP+V  CG+GVTAC + LG    GK DV 
Sbjct:   211 IPFTEFLTSEGLEKSPEEIQRLFQEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKPDVP 270

Query:   353 VYDGSWTEW--GAQPD 366
             VYDGSW EW   AQP+
Sbjct:   271 VYDGSWVEWYMRAQPE 286

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO

GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO

GO:0016784 "3-mercaptopyruvate sulfurtransferase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O64530	STR1_ARATH	2, ., 8, ., 1, ., 2	0.7146	0.9919	0.9762	yes	no
Q24JL3	STR2_ARATH	2, ., 8, ., 1, ., 2	0.7343	0.8525	0.9298	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.8.1	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	373
PLN02723	320	PLN02723, PLN02723, 3-mercaptopyruvate sulfurtrans	0.0
COG2897	285	COG2897, SseA, Rhodanese-related sulfurtransferase	1e-105
PRK11493	281	PRK11493, sseA, 3-mercaptopyruvate sulfurtransfera	3e-86
cd01448	122	cd01448, TST_Repeat_1, Thiosulfate sulfurtransfera	9e-55
cd01449	118	cd01449, TST_Repeat_2, Thiosulfate sulfurtransfera	4e-54
cd01445	138	cd01445, TST_Repeats, Thiosulfate sulfurtransferas	7e-22
smart00450	100	smart00450, RHOD, Rhodanese Homology Domain	2e-19
PRK09629	610	PRK09629, PRK09629, bifunctional thiosulfate sulfu	5e-19
smart00450	100	smart00450, RHOD, Rhodanese Homology Domain	1e-18
pfam00581	106	pfam00581, Rhodanese, Rhodanese-like domain	2e-18
pfam00581	106	pfam00581, Rhodanese, Rhodanese-like domain	3e-18
cd01445	138	cd01445, TST_Repeats, Thiosulfate sulfurtransferas	2e-15
cd00158	89	cd00158, RHOD, Rhodanese Homology Domain (RHOD); a	1e-12
cd01519	106	cd01519, RHOD_HSP67B2, Member of the Rhodanese Hom	1e-09
cd00158	89	cd00158, RHOD, Rhodanese Homology Domain (RHOD); a	7e-07
cd01449	118	cd01449, TST_Repeat_2, Thiosulfate sulfurtransfera	8e-07
cd01448	122	cd01448, TST_Repeat_1, Thiosulfate sulfurtransfera	1e-06
COG0607	110	COG0607, PspE, Rhodanese-related sulfurtransferase	3e-04
cd01524	90	cd01524, RHOD_Pyr_redox, Member of the Rhodanese H	9e-04
cd01444	96	cd01444, GlpE_ST, GlpE sulfurtransferase (ST) and	0.004

>gnl|CDD|178324 PLN02723, PLN02723, 3-mercaptopyruvate sulfurtransferase

 Score =  647 bits (1670), Expect = 0.0
 Identities = 271/319 (84%), Positives = 299/319 (93%)

Query: 55  MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 114
           M+S  +  +A+YST S+S  EPVVSVDWLHANLREPD+KVLDASWYMPDEQRNP QEYQV
Sbjct: 1   MASSGSETKANYSTQSISTNEPVVSVDWLHANLREPDVKVLDASWYMPDEQRNPIQEYQV 60

Query: 115 AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARV 174
           AHIPGALFFD+DG++DRTT+LPHMLPSEEAFAAAVSALG+ENKDG+VVYDGKGIFSAARV
Sbjct: 61  AHIPGALFFDLDGISDRTTDLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARV 120

Query: 175 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT 234
           WWMFRVFGH++VWVLDGGLP+WRASGYDVESSASGDAILKASAASEAIEKVYQGQ V P 
Sbjct: 121 WWMFRVFGHEKVWVLDGGLPKWRASGYDVESSASGDAILKASAASEAIEKVYQGQTVSPI 180

Query: 235 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIP 294
           TFQTKFQPHL+WTLEQVK+NIE+ TYQ +DARSKARFDG APEPRKGIRSGH+PGSKC+P
Sbjct: 181 TFQTKFQPHLVWTLEQVKKNIEDKTYQHIDARSKARFDGAAPEPRKGIRSGHIPGSKCVP 240

Query: 295 FPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVY 354
           FPQMLD+SQTLLPA+ELKKRFEQEGISL+ P+V +CGTGVTACILALGL+RLGK DV VY
Sbjct: 241 FPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTDVPVY 300

Query: 355 DGSWTEWGAQPDTPVETSS 373
           DGSWTEWGA PDTPV TS+
Sbjct: 301 DGSWTEWGALPDTPVATST 319

Length = 320

>gnl|CDD|225450 COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

 Score =  310 bits (795), Expect = e-105
 Identities = 117/299 (39%), Positives = 158/299 (52%), Gaps = 24/299 (8%)

Query: 73  PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
             E +VS DWL  NL +P + ++DA   +PD      +EY   HIPGA+FFD +      
Sbjct: 8   SSEFLVSPDWLAENLDDPAVVIVDARIILPDPDDA--EEYLEGHIPGAVFFDWEADLSDP 65

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGG 192
             LPHMLPS E FA  +  LG+ N D +VVYD  G F AAR WW+ R  GH+ V +LDGG
Sbjct: 66  VPLPHMLPSPEQFAKLLGELGIRNDDTVVVYDDGGGFFAARAWWLLRYLGHENVRILDGG 125

Query: 193 LPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVK 252
           LP W+A+G  +E+                           PTTF  K+    +     V 
Sbjct: 126 LPAWKAAGLPLETEPP---------------------EPPPTTFSAKYNVKAVVDATLVA 164

Query: 253 RNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELK 312
             +E     L+DARS  RF G  PEPR G  +GH+PG+  IP+  ++D        +E+ 
Sbjct: 165 DALEVPAVLLIDARSPERFRGKEPEPRDGK-AGHIPGAINIPWTDLVDDGGLFKSPEEIA 223

Query: 313 KRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET 371
           + +   GI  +K V+  CG+GV A +  L L  LG  +  +YDGSW+EWG+ PD PVET
Sbjct: 224 RLYADAGIDPDKEVIVYCGSGVRASVTWLALAELGGPNNRLYDGSWSEWGSDPDRPVET 282

Length = 285

>gnl|CDD|236917 PRK11493, sseA, 3-mercaptopyruvate sulfurtransferase; Provisional

 Score =  262 bits (671), Expect = 3e-86
 Identities = 113/295 (38%), Positives = 163/295 (55%), Gaps = 23/295 (7%)

Query: 78  VSVDWLHANLREPDLKVLDASWYMP-DEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           V+ DWL  ++ +P+++++DA    P  E R+   EY+  HIPGA+FFD++ ++D T+ LP
Sbjct: 7   VAADWLAEHIDDPEIQIIDARMAPPGQEDRDVAAEYRAGHIPGAVFFDIEALSDHTSPLP 66

Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
           HM+P  E FA A+  LG+     LVVYD   +FSA R WWM R FG ++V +L GGL  W
Sbjct: 67  HMMPRPETFAVAMRELGVNQDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSILAGGLAGW 126

Query: 197 RASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIE 256
           +     +E    G   L                      F   F P  +  L  V     
Sbjct: 127 QRDDLLLE---EGAVELP------------------EGEFNAAFNPEAVVRLTDVLLASH 165

Query: 257 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE 316
           E T Q+VDAR  ARF+ +  EPR G+R GH+PG+  +P+ + L     L   DEL   F 
Sbjct: 166 EKTAQIVDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTE-LVREGELKTTDELDAIFF 224

Query: 317 QEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET 371
             G+S ++P++ +CG+GVTA ++ L L  L   +V +YDG+W+EWGA+ D PVE 
Sbjct: 225 GRGVSFDRPIIASCGSGVTAAVVVLALATLDVPNVKLYDGAWSEWGARADLPVEP 279

Length = 281

>gnl|CDD|238725 cd01448, TST_Repeat_1, Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain

 Score =  175 bits (447), Expect = 9e-55
 Identities = 66/124 (53%), Positives = 84/124 (67%), Gaps = 2/124 (1%)

Query: 77  VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           +VS DWL  +L +PD+++LDA WY+PD  R+  +EY   HIPGA+FFD+D   D  +  P
Sbjct: 1   LVSPDWLAEHLDDPDVRILDARWYLPD--RDGRKEYLEGHIPGAVFFDLDEDLDDKSPGP 58

Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
           HMLPS E FA  + +LG+ N D +VVYD  G F AAR WW  R FGH+ V VLDGGL  W
Sbjct: 59  HMLPSPEEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHENVRVLDGGLQAW 118

Query: 197 RASG 200
           +A G
Sbjct: 119 KAEG 122

TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction. Length = 122

>gnl|CDD|238726 cd01449, TST_Repeat_2, Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain

 Score =  173 bits (442), Expect = 4e-54
 Identities = 60/117 (51%), Positives = 80/117 (68%)

Query: 247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 306
           T E+V  N++ G  QLVDARS  RF G+ PEPR G+RSGH+PG+  IP+  +LD   T  
Sbjct: 2   TAEEVLANLDSGDVQLVDARSPERFRGEVPEPRPGLRSGHIPGAVNIPWTSLLDEDGTFK 61

Query: 307 PADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA 363
             +EL+  F   GI+ +KPV+  CG+GVTAC+L L L  LG  +V +YDGSW+EWG+
Sbjct: 62  SPEELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYKNVRLYDGSWSEWGS 118

TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue. Length = 118

>gnl|CDD|238722 cd01445, TST_Repeats, Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain

 Score = 90.2 bits (223), Expect = 7e-22
 Identities = 45/136 (33%), Positives = 57/136 (41%), Gaps = 17/136 (12%)

Query: 78  VSVDWLHANLRE----PDLKVLDASWYMPD--EQRNPFQEYQVA---------HIPGALF 122
            S + L  NL         ++LDA    P   E R  + E Q           HIPGA F
Sbjct: 1   KSTEQLAENLEAGKVGKGFQLLDARAQSPGTREARGEYLETQPEPDAVGLDSGHIPGASF 60

Query: 123 FDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRV 180
           FD +   D       M PSE  FAA   A G++    L+  DG   G F+A  +    R+
Sbjct: 61  FDFEECLDEAGFEESMEPSEAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARL 120

Query: 181 FGHDRVWVLDGGLPRW 196
            GH  V +LDGG   W
Sbjct: 121 CGHPDVAILDGGFFEW 136

Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats. Length = 138

>gnl|CDD|197731 smart00450, RHOD, Rhodanese Homology Domain

 Score = 81.7 bits (202), Expect = 2e-19
 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 12/111 (10%)

Query: 256 EEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRF 315
            +    L+D RS   ++G           GH+PG+  IP  ++LD     L   E ++  
Sbjct: 1   NDEKVVLLDVRSPEEYEG-----------GHIPGAVNIPLSELLDRR-GELDILEFEELL 48

Query: 316 EQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPD 366
           ++ G+  +KPVV  C +G  +   A  L  LG  +V + DG + EW A   
Sbjct: 49  KRLGLDKDKPVVVYCRSGNRSAKAAWLLRELGFKNVYLLDGGYKEWSAAGP 99

An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions. Length = 100

>gnl|CDD|104071 PRK09629, PRK09629, bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional

 Score = 88.3 bits (218), Expect = 5e-19
 Identities = 72/259 (27%), Positives = 100/259 (38%), Gaps = 24/259 (9%)

Query: 112 YQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSA 171
           Y+  HI GA F D           P +LP           LG       VVYD +G   A
Sbjct: 36  YEAGHIRGARFVDPKRTQLGKPPAPGLLPDTADLEQLFGELGHNPDAVYVVYDDEGGGWA 95

Query: 172 ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVV 231
            R  W+  V GH     LDGG+  W A    + +     A                    
Sbjct: 96  GRFIWLLDVIGHSGYHYLDGGVLAWEAQALPLSTDVPPVA-------------------G 136

Query: 232 GPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSK 291
           GP T     +P    T E ++  +      + DAR+   + G+     KG   GH+PG+ 
Sbjct: 137 GPVTLTLHDEPTA--TREYLQSRLGAADLAIWDARAPTEYSGEKVVAAKG---GHIPGAV 191

Query: 292 CIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDV 351
              +   +D ++ L    ++ +     GI+ +K V+T C T   +    L    LG   V
Sbjct: 192 NFEWTAGMDKARNLRIRQDMPEILRDLGITPDKEVITHCQTHHRSGFTYLVAKALGYPRV 251

Query: 352 AVYDGSWTEWGAQPDTPVE 370
             Y GSW EWG  PDTPVE
Sbjct: 252 KAYAGSWGEWGNHPDTPVE 270

Length = 610

>gnl|CDD|197731 smart00450, RHOD, Rhodanese Homology Domain

 Score = 79.8 bits (197), Expect = 1e-18
 Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 15/114 (13%)

Query: 89  EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA 148
           +  + +LD         R+P +EY+  HIPGA+   +  + DR   L  +      F   
Sbjct: 2   DEKVVLLDV--------RSP-EEYEGGHIPGAVNIPLSELLDRRGELDIL-----EFEEL 47

Query: 149 VSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD 202
           +  LGL+    +VVY   G  SA +  W+ R  G   V++LDGG   W A+G  
Sbjct: 48  LKRLGLDKDKPVVVYCRSGNRSA-KAAWLLRELGFKNVYLLDGGYKEWSAAGPP 100

An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions. Length = 100

>gnl|CDD|216005 pfam00581, Rhodanese, Rhodanese-like domain

 Score = 79.5 bits (196), Expect = 2e-18
 Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 27/126 (21%)

Query: 79  SVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHM 138
           + + L A L   D+ ++D             +EY   HIPGA+            N+P  
Sbjct: 1   TAEELKALLEADDVVLIDVR---------SPEEYAKGHIPGAV------------NIPLS 39

Query: 139 LPSEEAFAAAVSALG--LENKDGLVVYDGKGIFS----AARVWWMFRVFGHDRVWVLDGG 192
           LPS +   + +  LG  L+    +VVY   G  S    A  +  + +  G+  V+VLDGG
Sbjct: 40  LPSLDKLESELEELGKKLDKDKTIVVYCASGNRSGQAAALLLALILKALGYKNVYVLDGG 99

Query: 193 LPRWRA 198
              W+A
Sbjct: 100 FEAWKA 105

Rhodanese has an internal duplication. This Pfam represents a single copy of this duplicated domain. The domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases. Length = 106

>gnl|CDD|216005 pfam00581, Rhodanese, Rhodanese-like domain

 Score = 79.1 bits (195), Expect = 3e-18
 Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 26/122 (21%)

Query: 247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 306
           T E++K  +E     L+D RS   +             GH+PG+  IP            
Sbjct: 1   TAEELKALLEADDVVLIDVRSPEEYAK-----------GHIPGAVNIPLSLP-------- 41

Query: 307 PADELKKRFEQEGISL--EKPVVTACGTG-----VTACILALGLNRLGKHDVAVYDGSWT 359
             D+L+   E+ G  L  +K +V  C +G       A +LAL L  LG  +V V DG + 
Sbjct: 42  SLDKLESELEELGKKLDKDKTIVVYCASGNRSGQAAALLLALILKALGYKNVYVLDGGFE 101

Query: 360 EW 361
            W
Sbjct: 102 AW 103

Rhodanese has an internal duplication. This Pfam represents a single copy of this duplicated domain. The domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases. Length = 106

>gnl|CDD|238722 cd01445, TST_Repeats, Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain

 Score = 72.5 bits (177), Expect = 2e-15
 Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 16/132 (12%)

Query: 246 WTLEQVKRNIEEGTYQLVDAR--------SKARFDGDAPEPRK-GIRSGHVPGSKCIPFP 296
              E ++       +QL+DAR        ++  +    PEP   G+ SGH+PG+    F 
Sbjct: 5   QLAENLEAGKVGKGFQLLDARAQSPGTREARGEYLETQPEPDAVGLDSGHIPGASFFDFE 64

Query: 297 QMLDAS---QTLLPAD-ELKKRFEQEGISLEKPVVTACG---TGVTACILALGLNRLGKH 349
           + LD +   +++ P++ E    FE +GI L+K ++   G    G TAC +AL     G  
Sbjct: 65  ECLDEAGFEESMEPSEAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124

Query: 350 DVAVYDGSWTEW 361
           DVA+ DG + EW
Sbjct: 125 DVAILDGGFFEW 136

Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats. Length = 138

>gnl|CDD|238089 cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein

 Score = 62.7 bits (153), Expect = 1e-12
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 24/112 (21%)

Query: 250 QVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           ++K  +++    L+D R    +            +GH+PG+  IP               
Sbjct: 1   ELKELLDDEDAVLLDVREPEEYA-----------AGHIPGAINIPL-------------S 36

Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 361
           EL++R     +  +KP+V  C +G  +   A  L + G  +V   +G    W
Sbjct: 37  ELEERAALLELDKDKPIVVYCRSGNRSARAAKLLRKAGGTNVYNLEGGMLAW 88

The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins. Length = 89

>gnl|CDD|238777 cd01519, RHOD_HSP67B2, Member of the Rhodanese Homology Domain superfamily

 Score = 55.0 bits (133), Expect = 1e-09
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 22/123 (17%)

Query: 246 WTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ 303
           ++ E+VK           L+D R          EP + +++G +PG+  IP   + DA  
Sbjct: 1   YSFEEVKNLPNPHPNKV-LIDVR----------EPEE-LKTGKIPGAINIPLSSLPDALA 48

Query: 304 TLLPADELKKRFEQEGISLEKPVVTACGTGV---TACILALGLNRLGKHDVAVYDGSWTE 360
             L  +E +K++     S +K ++  C  GV    A  LA     LG  +V  Y GSW +
Sbjct: 49  --LSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELA---RSLGYENVGNYPGSWLD 103

Query: 361 WGA 363
           W A
Sbjct: 104 WAA 106

This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized. Length = 106

>gnl|CDD|238089 cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein

 Score = 46.5 bits (111), Expect = 7e-07
 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 29/117 (24%)

Query: 82  WLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPS 141
            L   L + D  +LD         R P  EY   HIPGA+   +  + +R          
Sbjct: 1   ELKELLDDEDAVLLDV--------REPE-EYAAGHIPGAINIPLSELEER---------- 41

Query: 142 EEAFAAAVSALGLENKDG-LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR 197
                   +AL   +KD  +VVY   G   +AR   + R  G   V+ L+GG+  W+
Sbjct: 42  --------AALLELDKDKPIVVYCRSGN-RSARAAKLLRKAGGTNVYNLEGGMLAWK 89

The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins. Length = 89

>gnl|CDD|238726 cd01449, TST_Repeat_2, Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain

 Score = 47.2 bits (113), Expect = 8e-07
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 29/128 (22%)

Query: 78  VSVDWLHANLREPDLKVLDA-SWYMPDE---QRNPFQEYQVA-HIPGALFFDVDGVADRT 132
           V+ + + ANL   D++++DA S   P+    +    +    + HIPGA+           
Sbjct: 1   VTAEEVLANLDSGDVQLVDARS---PERFRGEVPEPRPGLRSGHIPGAV----------- 46

Query: 133 TNLPH--------MLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHD 184
            N+P            S E   A  +ALG+     ++VY G G+ +A  +     + G+ 
Sbjct: 47  -NIPWTSLLDEDGTFKSPEELRALFAALGITPDKPVIVYCGSGV-TACVLLLALELLGYK 104

Query: 185 RVWVLDGG 192
            V + DG 
Sbjct: 105 NVRLYDGS 112

TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue. Length = 118

>gnl|CDD|238725 cd01448, TST_Repeat_1, Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain

 Score = 46.8 bits (112), Expect = 1e-06
 Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 9/120 (7%)

Query: 247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQT-- 304
           + + +  ++++   +++DAR    +     + RK    GH+PG+      + LD      
Sbjct: 3   SPDWLAEHLDDPDVRILDAR----WYLPDRDGRKEYLEGHIPGAVFFDLDEDLDDKSPGP 58

Query: 305 --LLPADELKKRFEQEGISLEKPVV-TACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 361
             L   +E  +     GIS +  VV    G G  A      L   G  +V V DG    W
Sbjct: 59  HMLPSPEEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHENVRVLDGGLQAW 118

TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction. Length = 122

>gnl|CDD|223680 COG0607, PspE, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

 Score = 39.9 bits (93), Expect = 3e-04
 Identities = 23/115 (20%), Positives = 39/115 (33%), Gaps = 23/115 (20%)

Query: 247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 306
           + ++    +      L+D R    ++            GH+PG+               +
Sbjct: 8   SEDEAALLLAGEDAVLLDVREPEEYE-----------RGHIPGA------------AINI 44

Query: 307 PADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 361
           P  ELK       +  + P+V  C +GV +   A  L   G  +V   DG    W
Sbjct: 45  PLSELKAAENLLELPDDDPIVVYCASGVRSAAAAAALKLAGFTNVYNLDGGIDAW 99

Length = 110

>gnl|CDD|238782 cd01524, RHOD_Pyr_redox, Member of the Rhodanese Homology Domain superfamily

 Score = 37.6 bits (88), Expect = 9e-04
 Identities = 17/83 (20%), Positives = 28/83 (33%), Gaps = 26/83 (31%)

Query: 253 RNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELK 312
            N       L+D R+   F             GH+ G+  IP              DEL+
Sbjct: 7   DNYRADGVTLIDVRTPQEF-----------EKGHIKGAINIPL-------------DELR 42

Query: 313 KRFEQEGISLEKPVVTACGTGVT 335
            R  +  +  +K ++  C  G+ 
Sbjct: 43  DRLNE--LPKDKEIIVYCAVGLR 63

Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain. Length = 90

>gnl|CDD|238721 cd01444, GlpE_ST, GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily

 Score = 36.1 bits (84), Expect = 0.004
 Identities = 23/83 (27%), Positives = 29/83 (34%), Gaps = 20/83 (24%)

Query: 116 HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVW 175
           HIPGA+  D D + D           +      V           VVY   G  S+A++ 
Sbjct: 34  HIPGAIHLDEDSLDD--------WLGDLDRDRPV-----------VVYCYHGN-SSAQLA 73

Query: 176 WMFRVFGHDRVWVLDGGLPRWRA 198
              R  G   V  L GG   WR 
Sbjct: 74  QALREAGFTDVRSLAGGFEAWRR 96

Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine. Length = 96

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	373
PLN02723	320	3-mercaptopyruvate sulfurtransferase	100.0
COG2897	285	SseA Rhodanese-related sulfurtransferase [Inorgani	100.0
PRK11493	281	sseA 3-mercaptopyruvate sulfurtransferase; Provisi	100.0
PRK09629	610	bifunctional thiosulfate sulfurtransferase/phospha	100.0
KOG1529	286	consensus Mercaptopyruvate sulfurtransferase/thios	100.0
cd01445	138	TST_Repeats Thiosulfate sulfurtransferases (TST) c	99.92
cd01445	138	TST_Repeats Thiosulfate sulfurtransferases (TST) c	99.9
cd01449	118	TST_Repeat_2 Thiosulfate sulfurtransferase (TST),	99.9
cd01448	122	TST_Repeat_1 Thiosulfate sulfurtransferase (TST),	99.88
PRK00142	314	putative rhodanese-related sulfurtransferase; Prov	99.87
cd01519	106	RHOD_HSP67B2 Member of the Rhodanese Homology Doma	99.86
cd01448	122	TST_Repeat_1 Thiosulfate sulfurtransferase (TST),	99.86
PLN02160	136	thiosulfate sulfurtransferase	99.86
KOG1530	136	consensus Rhodanese-related sulfurtransferase [Ino	99.86
PRK11493	281	sseA 3-mercaptopyruvate sulfurtransferase; Provisi	99.85
cd01519	106	RHOD_HSP67B2 Member of the Rhodanese Homology Doma	99.84
TIGR03865	162	PQQ_CXXCW PQQ-dependent catabolism-associated CXXC	99.84
cd01518	101	RHOD_YceA Member of the Rhodanese Homology Domain	99.84
cd01449	118	TST_Repeat_2 Thiosulfate sulfurtransferase (TST),	99.84
TIGR03865	162	PQQ_CXXCW PQQ-dependent catabolism-associated CXXC	99.84
cd01533	109	4RHOD_Repeat_2 Member of the Rhodanese Homology Do	99.83
cd01533	109	4RHOD_Repeat_2 Member of the Rhodanese Homology Do	99.83
PLN02723	320	3-mercaptopyruvate sulfurtransferase	99.83
cd01527	99	RHOD_YgaP Member of the Rhodanese Homology Domain	99.82
cd01520	128	RHOD_YbbB Member of the Rhodanese Homology Domain	99.82
PRK09629	610	bifunctional thiosulfate sulfurtransferase/phospha	99.82
cd01518	101	RHOD_YceA Member of the Rhodanese Homology Domain	99.82
cd01520	128	RHOD_YbbB Member of the Rhodanese Homology Domain	99.81
PRK00162	108	glpE thiosulfate sulfurtransferase; Validated	99.81
cd01525	105	RHOD_Kc Member of the Rhodanese Homology Domain su	99.8
smart00450	100	RHOD Rhodanese Homology Domain. An alpha beta fold	99.8
cd01526	122	RHOD_ThiF Member of the Rhodanese Homology Domain	99.8
TIGR03167	311	tRNA_sel_U_synt tRNA 2-selenouridine synthase. The	99.8
cd01527	99	RHOD_YgaP Member of the Rhodanese Homology Domain	99.79
COG2897	285	SseA Rhodanese-related sulfurtransferase [Inorgani	99.79
cd01525	105	RHOD_Kc Member of the Rhodanese Homology Domain su	99.79
cd01534	95	4RHOD_Repeat_3 Member of the Rhodanese Homology Do	99.79
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	99.79
cd01447	103	Polysulfide_ST Polysulfide-sulfurtransferase - Rho	99.79
PRK11784	345	tRNA 2-selenouridine synthase; Provisional	99.78
PF00581	113	Rhodanese: Rhodanese-like domain This Prosite entr	99.78
cd01523	100	RHOD_Lact_B Member of the Rhodanese Homology Domai	99.78
PRK00162	108	glpE thiosulfate sulfurtransferase; Validated	99.78
cd01528	101	RHOD_2 Member of the Rhodanese Homology Domain sup	99.78
cd01522	117	RHOD_1 Member of the Rhodanese Homology Domain sup	99.78
cd01534	95	4RHOD_Repeat_3 Member of the Rhodanese Homology Do	99.78
cd01521	110	RHOD_PspE2 Member of the Rhodanese Homology Domain	99.77
cd01521	110	RHOD_PspE2 Member of the Rhodanese Homology Domain	99.77
cd01447	103	Polysulfide_ST Polysulfide-sulfurtransferase - Rho	99.77
cd01444	96	GlpE_ST GlpE sulfurtransferase (ST) and homologs a	99.77
smart00450	100	RHOD Rhodanese Homology Domain. An alpha beta fold	99.77
PLN02160	136	thiosulfate sulfurtransferase	99.76
cd01524	90	RHOD_Pyr_redox Member of the Rhodanese Homology Do	99.76
cd01528	101	RHOD_2 Member of the Rhodanese Homology Domain sup	99.75
cd01529	96	4RHOD_Repeats Member of the Rhodanese Homology Dom	99.75
PF00581	113	Rhodanese: Rhodanese-like domain This Prosite entr	99.75
cd01526	122	RHOD_ThiF Member of the Rhodanese Homology Domain	99.75
cd01530	121	Cdc25 Cdc25 phosphatases are members of the Rhodan	99.75
cd01530	121	Cdc25 Cdc25 phosphatases are members of the Rhodan	99.74
KOG1530	136	consensus Rhodanese-related sulfurtransferase [Ino	99.74
cd01523	100	RHOD_Lact_B Member of the Rhodanese Homology Domai	99.73
cd01535	145	4RHOD_Repeat_4 Member of the Rhodanese Homology Do	99.73
cd01529	96	4RHOD_Repeats Member of the Rhodanese Homology Dom	99.73
cd01524	90	RHOD_Pyr_redox Member of the Rhodanese Homology Do	99.72
cd01444	96	GlpE_ST GlpE sulfurtransferase (ST) and homologs a	99.72
cd01522	117	RHOD_1 Member of the Rhodanese Homology Domain sup	99.71
cd01531	113	Acr2p Eukaryotic arsenate resistance proteins are	99.71
cd01535	145	4RHOD_Repeat_4 Member of the Rhodanese Homology Do	99.71
cd01532	92	4RHOD_Repeat_1 Member of the Rhodanese Homology Do	99.7
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	99.7
cd01531	113	Acr2p Eukaryotic arsenate resistance proteins are	99.7
cd00158	89	RHOD Rhodanese Homology Domain (RHOD); an alpha be	99.7
cd01532	92	4RHOD_Repeat_1 Member of the Rhodanese Homology Do	99.7
TIGR02981	101	phageshock_pspE phage shock operon rhodanese PspE.	99.68
COG0607	110	PspE Rhodanese-related sulfurtransferase [Inorgani	99.68
PRK01415	247	hypothetical protein; Validated	99.67
PRK10287	104	thiosulfate:cyanide sulfurtransferase; Provisional	99.67
cd01443	113	Cdc25_Acr2p Cdc25 enzymes are members of the Rhoda	99.67
cd00158	89	RHOD Rhodanese Homology Domain (RHOD); an alpha be	99.66
cd01443	113	Cdc25_Acr2p Cdc25 enzymes are members of the Rhoda	99.66
cd01446	132	DSP_MapKP N-terminal regulatory rhodanese domain o	99.65
PRK00142	314	putative rhodanese-related sulfurtransferase; Prov	99.63
PRK01415	247	hypothetical protein; Validated	99.63
TIGR02981	101	phageshock_pspE phage shock operon rhodanese PspE.	99.6
PRK05320	257	rhodanese superfamily protein; Provisional	99.6
PRK10287	104	thiosulfate:cyanide sulfurtransferase; Provisional	99.59
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	99.59
COG0607	110	PspE Rhodanese-related sulfurtransferase [Inorgani	99.57
PRK05320	257	rhodanese superfamily protein; Provisional	99.57
cd01446	132	DSP_MapKP N-terminal regulatory rhodanese domain o	99.57
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	99.56
PRK07411	390	hypothetical protein; Validated	99.55
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	99.52
PRK11784	345	tRNA 2-selenouridine synthase; Provisional	99.52
TIGR03167	311	tRNA_sel_U_synt tRNA 2-selenouridine synthase. The	99.48
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	99.47
KOG1529	286	consensus Mercaptopyruvate sulfurtransferase/thios	99.45
PRK07411	390	hypothetical protein; Validated	99.43
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	99.42
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	99.28
COG1054	308	Predicted sulfurtransferase [General function pred	99.17
PRK01269	482	tRNA s(4)U8 sulfurtransferase; Provisional	99.11
COG1054	308	Predicted sulfurtransferase [General function pred	99.07
KOG3772	325	consensus M-phase inducer phosphatase [Cell cycle	98.93
KOG2017	427	consensus Molybdopterin synthase sulfurylase [Coen	98.9
KOG3772	325	consensus M-phase inducer phosphatase [Cell cycle	98.83
PRK01269	482	tRNA s(4)U8 sulfurtransferase; Provisional	98.79
KOG2017	427	consensus Molybdopterin synthase sulfurylase [Coen	98.44
COG5105	427	MIH1 Mitotic inducer, protein phosphatase [Cell di	98.22
COG5105	427	MIH1 Mitotic inducer, protein phosphatase [Cell di	97.73
KOG1717	343	consensus Dual specificity phosphatase [Defense me	96.44
PF04273	110	DUF442: Putative phosphatase (DUF442); InterPro: I	96.29
COG2603	334	Predicted ATPase [General function prediction only	96.28
TIGR01244	135	conserved hypothetical protein TIGR01244. No membe	95.95
COG2603	334	Predicted ATPase [General function prediction only	93.55
KOG3636	669	consensus Uncharacterized conserved protein, conta	91.2
COG3453	130	Uncharacterized protein conserved in bacteria [Fun	90.98
KOG0814	237	consensus Glyoxylase [General function prediction	89.5
KOG1093	725	consensus Predicted protein kinase (contains TBC a	89.42
TIGR01244	135	conserved hypothetical protein TIGR01244. No membe	87.67
PF04273	110	DUF442: Putative phosphatase (DUF442); InterPro: I	86.35
KOG1093	725	consensus Predicted protein kinase (contains TBC a	84.53
smart00195	138	DSPc Dual specificity phosphatase, catalytic domai	83.42
PLN02727	986	NAD kinase	80.36

>PLN02723 3-mercaptopyruvate sulfurtransferase

Probab=100.00  E-value=1.2e-62  Score=472.17  Aligned_cols=314  Identities=86%  Similarity=1.407  Sum_probs=283.9

Q ss_pred             hcccccCCCCCCCCCCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCC
Q 017338           59 AAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHM  138 (373)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~  138 (373)
                      .+.+.+.+++.+.++...+||++||++++++++++|||+||+++.+.|++.++|..||||||+|+|+..+.+.....+++
T Consensus         5 ~~~~~~~~~~~~~~~~~~lvs~~~L~~~l~~~~~~IiDvr~~~~~~~r~~~~~y~~gHIPgAi~i~~~~~~~~~~~~~~~   84 (320)
T PLN02723          5 GSETKANYSTQSISTNEPVVSVDWLHANLREPDVKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDLDGISDRTTDLPHM   84 (320)
T ss_pred             chhhcccCcccccccCCceecHHHHHHHhcCCCeEEEEeeccccCCCCchHHHHHhccCCCCeecCHHHhcCCCCCcCCC
Confidence            56777888888888888999999999999988899999999888877876678999999999999998887766778899


Q ss_pred             CCCHHHHHHHHHHcCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhh
Q 017338          139 LPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAA  218 (373)
Q Consensus       139 l~~~e~~~~~l~~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~  218 (373)
                      +|+++.|++.|+.+||+++++|||||+.|.+.++|++|+|+++||++|++||||+.+|+++|+|+++..+.+++++..++
T Consensus        85 lp~~~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~~V~~LdGG~~~W~~~G~pv~~~~~~~~~~~~~~~  164 (320)
T PLN02723         85 LPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHEKVWVLDGGLPKWRASGYDVESSASGDAILKASAA  164 (320)
T ss_pred             CCCHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHcCCCceEEcCCCHHHHHHcCCCcccCCCcccccccccc
Confidence            99999999999999999999999999988888899999999999999999999999999999999987654555555555


Q ss_pred             HHHHHHhhcCcccCCcceeeccCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccc
Q 017338          219 SEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQM  298 (373)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l  298 (373)
                      .+.+++.+.++.+.+.+|...+++.++++.+++.+++.+++.+|||+|++.||.|...++....+.||||||+|+|+.++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~iiD~R~~~ef~G~~~~~~~~~~~GHIPgAvnip~~~~  244 (320)
T PLN02723        165 SEAIEKVYQGQTVSPITFQTKFQPHLVWTLEQVKKNIEDKTYQHIDARSKARFDGAAPEPRKGIRSGHIPGSKCVPFPQM  244 (320)
T ss_pred             ccccccccccCCCCCCcccccCCccceecHHHHHHhhcCCCeEEEECCCcccccCCCCCCCCCCcCCcCCCCcccCHHHh
Confidence            56677777666677788988899999999999999998778899999999999998777666678999999999999998


Q ss_pred             cccCCCCCCHHHHHHHHHHcCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          299 LDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       299 ~~~~~~~~~~~~l~~~~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      .+.++.|++.++|++++.+.|++++++||+||++|.+|+.++++|+.+||+||++|+|||.+|...+++|++++
T Consensus       245 ~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~~v~~YdGs~~eW~~~~~~Pv~~~  318 (320)
T PLN02723        245 LDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTDVPVYDGSWTEWGALPDTPVATS  318 (320)
T ss_pred             cCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCeeEeCCCHHHHhcCCCCCccCC
Confidence            88888999999999999999999999999999999999999999999999999999999999999989999976

>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=7.2e-61  Score=444.97  Aligned_cols=277  Identities=42%  Similarity=0.807  Sum_probs=257.0

Q ss_pred             CCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHc
Q 017338           73 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (373)
Q Consensus        73 ~~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~  152 (373)
                      +...+||++||.+++++++++++|+|+..++..+  .++|..||||||++++++...+....+++|+|++++|+++|+.+
T Consensus         8 ~~~~lVs~~wl~~~l~~~~~~~~d~~~~~~~~~~--~~~Y~~~HIPGAv~~d~~~~~~~~~~~~~~lp~~e~fa~~~~~~   85 (285)
T COG2897           8 SSEFLVSPDWLAENLDDPAVVIVDARIILPDPDD--AEEYLEGHIPGAVFFDWEADLSDPVPLPHMLPSPEQFAKLLGEL   85 (285)
T ss_pred             CcceEEcHHHHHhhccccccccCceEEEeCCcch--HHHHHhccCCCCEecCHHHhhcCCCCCCCCCCCHHHHHHHHHHc
Confidence            4567999999999999988999999988887654  58999999999999999987777777899999999999999999


Q ss_pred             CCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcCcccC
Q 017338          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVG  232 (373)
Q Consensus       153 gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (373)
                      ||+++++||+|++.+...|+|+||+|+++||+||++||||+.+|+++|+|+++.++                     .+.
T Consensus        86 GI~~d~tVVvYdd~~~~~A~ra~W~l~~~Gh~~V~iLdGG~~~W~~~g~p~~~~~~---------------------~~~  144 (285)
T COG2897          86 GIRNDDTVVVYDDGGGFFAARAWWLLRYLGHENVRILDGGLPAWKAAGLPLETEPP---------------------EPP  144 (285)
T ss_pred             CCCCCCEEEEECCCCCeehHHHHHHHHHcCCCceEEecCCHHHHHHcCCCccCCCC---------------------CCC
Confidence            99999999999999999999999999999999999999999999999999998653                     345


Q ss_pred             CcceeeccCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHH
Q 017338          233 PTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELK  312 (373)
Q Consensus       233 ~~~~~~~~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~  312 (373)
                      +..|..+++...+++.++++..++.+..+|||+|++++|.|+..+|.... .||||||+|+||.++.++...|++.++++
T Consensus       145 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~liDaR~~~rf~G~~~ep~~~~-~GHIPGAiNipw~~~~~~~~~~~~~~~~~  223 (285)
T COG2897         145 PTTFSAKYNVKAVVDATLVADALEVPAVLLIDARSPERFRGKEPEPRDGK-AGHIPGAINIPWTDLVDDGGLFKSPEEIA  223 (285)
T ss_pred             CccccccCCccccCCHHHHHHHhcCCCeEEEecCCHHHhCCCCCCCCCCC-CCCCCCCcCcCHHHHhcCCCccCcHHHHH
Confidence            67888899999999999999999988899999999999999999987664 89999999999999999778899999999


Q ss_pred             HHHHHcCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCCC
Q 017338          313 KRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETSS  373 (373)
Q Consensus       313 ~~~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~~  373 (373)
                      .+++..|++++++||+||++|.+|+..+++|+.+|++++++|||||.||.+..+.||++|+
T Consensus       224 ~l~~~~gi~~~~~vI~yCgsG~~As~~~~al~~lg~~~~~lYdGSWsEWg~~~~~PV~~g~  284 (285)
T COG2897         224 RLYADAGIDPDKEVIVYCGSGVRASVTWLALAELGGPNNRLYDGSWSEWGSDPDRPVETGE  284 (285)
T ss_pred             HHHHhcCCCCCCCEEEEcCCchHHHHHHHHHHHhCCCCcccccChHHHhhcCCCCccccCC
Confidence            9998999999999999999999999999999999999999999999999999999999985

>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional

Probab=100.00  E-value=2.7e-54  Score=407.93  Aligned_cols=277  Identities=40%  Similarity=0.811  Sum_probs=242.7

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCC-CCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQ-RNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~-r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      ..+|+++||++++++++++|||+|+...... ++...+|..||||||+|+|+..+.......++++|+++.|+++++.+|
T Consensus         4 ~~lvs~~~l~~~l~~~~~~iiD~R~~~~~~~~~~~~~~y~~GHIpGA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G   83 (281)
T PRK11493          4 TWFVAADWLAEHIDDPEIQIIDARMAPPGQEDRDVAAEYRAGHIPGAVFFDIEALSDHTSPLPHMMPRPETFAVAMRELG   83 (281)
T ss_pred             CcccCHHHHHHhcCCCCeEEEEeeCCCCCccccchHHHHHhCcCCCCEEcCHHHhcCCCCCCCCCCCCHHHHHHHHHHcC
Confidence            4689999999999998999999985332221 122478999999999999998876666667789999999999999999


Q ss_pred             CCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcCcccCC
Q 017338          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP  233 (373)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (373)
                      ++++++||+||..+.+.+++++|+|+.+||++|++|+||+.+|+++|+|+++..+                     .+.+
T Consensus        84 i~~d~~VVvyc~~~~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~---------------------~~~~  142 (281)
T PRK11493         84 VNQDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSILAGGLAGWQRDDLLLEEGAV---------------------ELPE  142 (281)
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHhcCCcEEEcCCCHHHHHHcCCCccCCCC---------------------CCCC
Confidence            9999999999997776789999999999999999999999999999999988753                     2345


Q ss_pred             cceeeccCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHH
Q 017338          234 TTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKK  313 (373)
Q Consensus       234 ~~~~~~~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~  313 (373)
                      .+|....++..+++.+++...+.+++.+|||+|+++||.|...++....+.||||||+|+|+.++.+ .+.|+++++|++
T Consensus       143 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~llD~R~~~e~~G~~~~~~~~~~~GhIpgA~~i~~~~~~~-~~~~~~~~~l~~  221 (281)
T PRK11493        143 GEFNAAFNPEAVVRLTDVLLASHEKTAQIVDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR-EGELKTTDELDA  221 (281)
T ss_pred             CcccccCCccceecHHHHHHhhcCCCcEEEeCCCccceeeeccCCCCCcccccCCCcCCCCHHHhcC-CCCcCCHHHHHH
Confidence            6777777788889999999888777789999999999999776665556789999999999999875 457899999999


Q ss_pred             HHHHcCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCCC
Q 017338          314 RFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETSS  373 (373)
Q Consensus       314 ~~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~~  373 (373)
                      .|.+.|++++++||+||++|.+|+.++++|+.+||+||++|+|||.+|....++|++++.
T Consensus       222 ~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~~v~~y~Gs~~eW~~~~~~P~~~~~  281 (281)
T PRK11493        222 IFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVPNVKLYDGAWSEWGARADLPVEPAK  281 (281)
T ss_pred             HHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCCHHHHccCCCCCcCCCC
Confidence            999999999999999999999999999999999999999999999999986599999874

>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional

Probab=100.00  E-value=1e-52  Score=431.41  Aligned_cols=266  Identities=27%  Similarity=0.463  Sum_probs=238.1

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      ..++||++||++++++++++|||+|         +.++|..||||||+|+|++.+........+++|+.++|++.++++|
T Consensus         7 ~~~lIs~~eL~~~l~~~~vvIIDvR---------~~~eY~~GHIPGAv~i~~~~~~~~~~~~~~~lp~~~~l~~~l~~lG   77 (610)
T PRK09629          7 LSLVIEPNDLLERLDAPELILVDLT---------SSARYEAGHIRGARFVDPKRTQLGKPPAPGLLPDTADLEQLFGELG   77 (610)
T ss_pred             CCceecHHHHHHHhcCCCEEEEECC---------ChHHHHhCCCCCcEEcChhHhhccCCCCCCCCCCHHHHHHHHHHcC
Confidence            4578999999999998899999996         3589999999999999987654444456789999999999999999


Q ss_pred             CCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcCcccCC
Q 017338          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP  233 (373)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (373)
                      ++++++||+||..+...++|+||+|+++||++|++||||+.+|+++|+|+++..+                     ...+
T Consensus        78 I~~d~~VVvYd~~g~~~A~R~~w~L~~~G~~~V~iLdGG~~aW~~ag~p~~~~~~---------------------~~~~  136 (610)
T PRK09629         78 HNPDAVYVVYDDEGGGWAGRFIWLLDVIGHSGYHYLDGGVLAWEAQALPLSTDVP---------------------PVAG  136 (610)
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHcCCCCEEEcCCCHHHHHHcCCccccCCC---------------------CCCC
Confidence            9999999999998877799999999999999999999999999999999988653                     1234


Q ss_pred             cceeeccCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHH
Q 017338          234 TTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKK  313 (373)
Q Consensus       234 ~~~~~~~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~  313 (373)
                      .+|....++..+++.+++.+++++++++|||+|+++||.|+...   ..+.||||||+|+||..+.+..+.+++++++++
T Consensus       137 ~~~~~~~~~~~~v~~e~v~~~l~~~~~~iIDaR~~~ef~G~~~~---~~r~GHIPGAvnip~~~~~~~~~~lk~~~el~~  213 (610)
T PRK09629        137 GPVTLTLHDEPTATREYLQSRLGAADLAIWDARAPTEYSGEKVV---AAKGGHIPGAVNFEWTAGMDKARNLRIRQDMPE  213 (610)
T ss_pred             cceeeccCCcccccHHHHHHhhCCCCcEEEECCCccccCCcccc---cccCCCCCCCeecCHHHhcCCCCCCCCHHHHHH
Confidence            56666777788999999999998878899999999999987542   237899999999999988877788999999999


Q ss_pred             HHHHcCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          314 RFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       314 ~~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      ++.+.|++++++||+||++|.+|+.++++|+.+||+||++|||||.+|.+.+++|+++.
T Consensus       214 ~~~~~Gi~~~~~VVvYC~sG~rAa~~~~~L~~lG~~~V~~YdGsw~eW~~~~~lPv~~~  272 (610)
T PRK09629        214 ILRDLGITPDKEVITHCQTHHRSGFTYLVAKALGYPRVKAYAGSWGEWGNHPDTPVEVP  272 (610)
T ss_pred             HHHHcCCCCCCCEEEECCCChHHHHHHHHHHHcCCCCcEEeCCCHHHHhCCCCCccccC
Confidence            99999999999999999999999999999999999999999999999999888999864

>KOG1529 consensus Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase [Defense mechanisms]

Probab=100.00  E-value=1.3e-50  Score=367.77  Aligned_cols=278  Identities=45%  Similarity=0.855  Sum_probs=254.3

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      ...+|+++|+.+++++.+++|||+.|+++..+|+...||..-|||||++|+++.+.+..++.++|+|..+.|++.++.+|
T Consensus         3 ~~~iv~~~~v~~~~~~~~~~iLDaSw~~~~~~~~~~~e~~~~hipga~~fdld~~~~~s~~~~~~lp~~e~Fa~y~~~lG   82 (286)
T KOG1529|consen    3 VDSIVSVKWVMENLGNHGLRILDASWYFPPLRRIAEFEFLERHIPGASHFDLDIISYPSSPYRHMLPTAEHFAEYASRLG   82 (286)
T ss_pred             cccccChHHHHHhCcCCCeEEEeeeeecCchhhhhhhhhhhccCCCceeeeccccccCCCcccccCccHHHHHHHHHhcC
Confidence            35789999999999998999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCeEEEEcC--CCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcCccc
Q 017338          154 LENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVV  231 (373)
Q Consensus       154 i~~~~~VVvy~~--~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (373)
                      +++++.||||+.  .|+.+|+|+||+|+.+||++|.+||||+.+|+++|+|++++....                   ..
T Consensus        83 i~n~d~vViYd~~~~Gm~~Asrv~W~fr~fGh~~VslL~GG~~~Wk~~g~~~~s~~~~~-------------------p~  143 (286)
T KOG1529|consen   83 VDNGDHVVIYDRGDGGMFSASRVWWTFRVFGHTKVSLLNGGFRAWKAAGGPVDSSKVET-------------------PY  143 (286)
T ss_pred             CCCCCeEEEEcCCCcceeehhhHHHHHHHhCccEEEEecCcHHHHHHcCCccccccccC-------------------CC
Confidence            999999999998  888899999999999999999999999999999999999986310                   00


Q ss_pred             CCcceeeccCCccccCHHHHHHH-hhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHH
Q 017338          232 GPTTFQTKFQPHLIWTLEQVKRN-IEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE  310 (373)
Q Consensus       232 ~~~~~~~~~~~~~~is~~el~~~-~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~  310 (373)
                      .+..+...+++..+++.+++..+ ...+++++||+|+..+|.|+.++|+.+...||||||+|+|+.++.+.++..+++++
T Consensus       144 ~~~~~~~~~d~~il~~~edi~~n~~~~~~~~~~DaRs~grF~Gt~p~~~~~~~ggHIpGa~n~P~~~~~~~~g~~k~~ed  223 (286)
T KOG1529|consen  144 SPIVFVASLDNSILATLEDIPFNNLATKNFQYLDARSKGRFDGTEPEPRSGATGGHIPGAINFPFDEVLDPDGFIKPAED  223 (286)
T ss_pred             CCccchhhcchHHHHHHhhccccccccccceeeeccccccccccCCCCcccCcCccCCCcccCChHHhcccccccCCHHH
Confidence            34455567788888999998776 66778999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHh-cCCCCCCcC
Q 017338          311 LKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWG-AQPDTPVET  371 (373)
Q Consensus       311 l~~~~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~-~~~g~Pv~~  371 (373)
                      +++.+.+.|+..++|||+.|++|+.|+..+.+|.+.| .+|++|||||.+|. ..+.+++++
T Consensus       224 l~~~f~~~~l~~~~p~~~sC~~Gisa~~i~~al~r~g-~~~~lYdGS~~Ew~~~~Pe~~~~~  284 (286)
T KOG1529|consen  224 LKHLFAQKGLKLSKPVIVSCGTGISASIIALALERSG-PDAKLYDGSWTEWALRAPELLIEN  284 (286)
T ss_pred             HHHHHHhcCcccCCCEEEeeccchhHHHHHHHHHhcC-CCcceecccHHHHhhcCchhhhhc
Confidence            9999999999999999999999999999999999999 78999999999998 444455544

>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain

Probab=99.92  E-value=6.9e-25  Score=185.49  Aligned_cols=119  Identities=37%  Similarity=0.544  Sum_probs=104.9

Q ss_pred             ccHHHHHHhcC----CCCeEEEEeecCCCCCCCCChhhhhh------------CCCcCceecCcccccccCCCCCCCCCC
Q 017338           78 VSVDWLHANLR----EPDLKVLDASWYMPDEQRNPFQEYQV------------AHIPGALFFDVDGVADRTTNLPHMLPS  141 (373)
Q Consensus        78 is~~~l~~~l~----~~~~~iiDvR~~~~~~~r~~~~ey~~------------gHIpGAi~ip~~~l~~~~~~~~~~l~~  141 (373)
                      ||++||.++++    +++++|||+|+.+++. |+..++|..            ||||||+|+|+..+........+++|+
T Consensus         1 vs~e~l~~~l~~~~~~~~~~iiD~r~~~~~~-~~~~~~y~~~~~~~~~~~~~~GHIPgAv~~~~~~~~~~~~~~~~~~p~   79 (138)
T cd01445           1 KSTEQLAENLEAGKVGKGFQLLDARAQSPGT-REARGEYLETQPEPDAVGLDSGHIPGASFFDFEECLDEAGFEESMEPS   79 (138)
T ss_pred             CCHHHHHHHhhccccCCCeEEEEccCCCccC-cchhhhhcccCCCCCcCCCcCCcCCCCEeeCHHHhhCcCCCCCCCCCC
Confidence            68999999998    5689999999776654 555578988            999999999998776655566788999


Q ss_pred             HHHHHHHHHHcCCCCCCeEEEEcCC--CCchHHHHHHHHHHcCCCceEEecCCHHHHH
Q 017338          142 EEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (373)
Q Consensus       142 ~e~~~~~l~~~gi~~~~~VVvy~~~--g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~  197 (373)
                      .++|++.++.+||+++++||+||+.  ++..|+|+||+|+.+||++|++||||+.+|+
T Consensus        80 ~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~ildGG~~~W~  137 (138)
T cd01445          80 EAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAILDGGFFEWF  137 (138)
T ss_pred             HHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEEeCCCHHHhh
Confidence            9999999999999999999999975  4567999999999999999999999999996

Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.

>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain

Probab=99.90  E-value=4.1e-23  Score=174.63  Aligned_cols=117  Identities=37%  Similarity=0.647  Sum_probs=99.2

Q ss_pred             cCHHHHHHHhh----CCCcEEEEecCC--------CccCCCCCCCCC-CCCcccCCCCcccCcccccccCC----CCCCH
Q 017338          246 WTLEQVKRNIE----EGTYQLVDARSK--------ARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQ----TLLPA  308 (373)
Q Consensus       246 is~~el~~~~~----~~~~~iIDvR~~--------~e~~G~~~~~~~-~~~~GhIpGA~~ip~~~l~~~~~----~~~~~  308 (373)
                      +|.+||.++++    +++.+|||+|+.        ++|.|..+++.. +.+.||||||+|+|+.++.+..+    .+++.
T Consensus         1 vs~e~l~~~l~~~~~~~~~~iiD~r~~~~~~~~~~~~y~~~~~~~~~~~~~~GHIPgAv~~~~~~~~~~~~~~~~~~p~~   80 (138)
T cd01445           1 KSTEQLAENLEAGKVGKGFQLLDARAQSPGTREARGEYLETQPEPDAVGLDSGHIPGASFFDFEECLDEAGFEESMEPSE   80 (138)
T ss_pred             CCHHHHHHHhhccccCCCeEEEEccCCCccCcchhhhhcccCCCCCcCCCcCCcCCCCEeeCHHHhhCcCCCCCCCCCCH
Confidence            46789999987    467999999987        889876554421 23569999999999988765433    46677


Q ss_pred             HHHHHHHHHcCCCCCCcEEEEcCC---chHHHHHHHHHHHcCCCCceeecccHHHHh
Q 017338          309 DELKKRFEQEGISLEKPVVTACGT---GVTACILALGLNRLGKHDVAVYDGSWTEWG  362 (373)
Q Consensus       309 ~~l~~~~~~~gi~~~~~IvvyC~~---G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~  362 (373)
                      ++|++.|.+.||+++++||+||.+   |.+|++++|+|+.+|++||++|||||.+|.
T Consensus        81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~ildGG~~~W~  137 (138)
T cd01445          81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAILDGGFFEWF  137 (138)
T ss_pred             HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEEeCCCHHHhh
Confidence            899999999999999999999986   889999999999999999999999999996

Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.

>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain

Probab=99.90  E-value=4.1e-23  Score=169.82  Aligned_cols=118  Identities=51%  Similarity=0.959  Sum_probs=102.9

Q ss_pred             cCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCc
Q 017338          246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKP  325 (373)
Q Consensus       246 is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~  325 (373)
                      ++++++.+++++++.+|||+|+..+|.+....+...+..||||||+|+|+.++....+.+++.+++++.+...+++++++
T Consensus         1 ~s~~~l~~~l~~~~~~iiDvR~~~e~~~~~~~~~~~~~~ghIpgA~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (118)
T cd01449           1 VTAEEVLANLDSGDVQLVDARSPERFRGEVPEPRPGLRSGHIPGAVNIPWTSLLDEDGTFKSPEELRALFAALGITPDKP   80 (118)
T ss_pred             CCHHHHHHhcCCCCcEEEeCCCHHHcCCcCCCCCCCCcCCcCCCCcccChHHhcCCCCCcCCHHHHHHHHHHcCCCCCCC
Confidence            35788888887667899999999999765444433445699999999999988766667889999999999999999999


Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhc
Q 017338          326 VVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA  363 (373)
Q Consensus       326 IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~  363 (373)
                      ||+||.+|.+|..+++.|+.+||++|++|+||+.+|..
T Consensus        81 iv~yc~~g~~s~~~~~~l~~~G~~~v~~l~GG~~~W~~  118 (118)
T cd01449          81 VIVYCGSGVTACVLLLALELLGYKNVRLYDGSWSEWGS  118 (118)
T ss_pred             EEEECCcHHHHHHHHHHHHHcCCCCeeeeCChHHHhcC
Confidence            99999999999999999999999999999999999963

TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.

>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain

Probab=99.88  E-value=3.7e-22  Score=165.19  Aligned_cols=122  Identities=54%  Similarity=1.039  Sum_probs=102.4

Q ss_pred             cccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCC
Q 017338           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  156 (373)
Q Consensus        77 ~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~  156 (373)
                      +|++++|.+++.+++.+|||+|.....  .....+|..||||||+|+|+..+........+++++.+.|++.+..+++++
T Consensus         1 ~i~~~~l~~~l~~~~~~ivDvR~~~~~--~~~~~~~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (122)
T cd01448           1 LVSPDWLAEHLDDPDVRILDARWYLPD--RDGRKEYLEGHIPGAVFFDLDEDLDDKSPGPHMLPSPEEFAELLGSLGISN   78 (122)
T ss_pred             CcCHHHHHHHhCCCCeEEEEeecCCCC--CchhhHHhhCCCCCCEEcChhhccccCCCCCCCCCCHHHHHHHHHHcCCCC
Confidence            489999999998878999999821111  112278999999999999998875433345678999999999999999999


Q ss_pred             CCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCC
Q 017338          157 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  200 (373)
Q Consensus       157 ~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g  200 (373)
                      +++||+||+.|+.++++++++|+.+||++|++|+||+.+|.++|
T Consensus        79 ~~~vv~~c~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g  122 (122)
T cd01448          79 DDTVVVYDDGGGFFAARAWWTLRYFGHENVRVLDGGLQAWKAEG  122 (122)
T ss_pred             CCEEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHhCc
Confidence            99999999986566999999999999999999999999998765

TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.

>PRK00142 putative rhodanese-related sulfurtransferase; Provisional

Probab=99.87  E-value=7.9e-23  Score=195.07  Aligned_cols=194  Identities=13%  Similarity=0.119  Sum_probs=139.1

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 017338           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi  154 (373)
                      .++-+++++.+.+.+ ...++|+|         +...|..+||||++++|...+.              .|..+|.... 
T Consensus        13 ~~i~~~~~~~~~l~~-~~~~~d~r---------g~i~~a~egIngtis~~~~~~~--------------~~~~~l~~~~-   67 (314)
T PRK00142         13 TPIEDPEAFRDEHLA-LCKSLGLK---------GRILVAEEGINGTVSGTIEQTE--------------AYMAWLKADP-   67 (314)
T ss_pred             ccCCCHHHHHHHHHH-HHHHcCCe---------eEEEEcCCCceEEEEecHHHHH--------------HHHHHHhhCc-
Confidence            456678888887766 46789997         5578999999999999985432              3444443321 


Q ss_pred             CCCCeE-EEEcCCCCc----hHHHHHHHHHHcCCC-ceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcC
Q 017338          155 ENKDGL-VVYDGKGIF----SAARVWWMFRVFGHD-RVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQG  228 (373)
Q Consensus       155 ~~~~~V-Vvy~~~g~~----~a~ra~~~L~~~G~~-~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~  228 (373)
                       ...++ ++.+.....    ...++...|..+|++ ++.-+.             .                        
T Consensus        68 -~~~~i~l~~~~~~~~~f~~l~~~~~~eLv~~G~d~~v~~~~-------------~------------------------  109 (314)
T PRK00142         68 -RFADIRFKISEDDGHAFPRLSVKVRKEIVALGLDDDIDPLE-------------N------------------------  109 (314)
T ss_pred             -CCCCceEEeccccCCCcccceeeeeeeeeecCCCCCCCccc-------------c------------------------
Confidence             12333 333331111    125566677777775 433111             0                        


Q ss_pred             cccCCcceeeccCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCH
Q 017338          229 QVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPA  308 (373)
Q Consensus       229 ~~~~~~~~~~~~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~  308 (373)
                                   ....++++++.+++.+++.+|||+|++.||           ..||||||+|+|+..+.+.      .
T Consensus       110 -------------~~~~is~~el~~~l~~~~~vlIDVR~~~E~-----------~~GhI~GAi~ip~~~~~~~------~  159 (314)
T PRK00142        110 -------------VGTYLKPKEVNELLDDPDVVFIDMRNDYEY-----------EIGHFENAIEPDIETFREF------P  159 (314)
T ss_pred             -------------CCcccCHHHHHHHhcCCCeEEEECCCHHHH-----------hcCcCCCCEeCCHHHhhhh------H
Confidence                         012467889999888888999999999999           7899999999999876431      1


Q ss_pred             HHHHHHHHHcCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcC
Q 017338          309 DELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       309 ~~l~~~~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~  364 (373)
                      +.+++   ..++.++++||+||.+|.||..++..|+.+||++|++|+||+.+|...
T Consensus       160 ~~l~~---~~~~~kdk~IvvyC~~G~Rs~~aa~~L~~~Gf~~V~~L~GGi~~w~~~  212 (314)
T PRK00142        160 PWVEE---NLDPLKDKKVVMYCTGGIRCEKASAWMKHEGFKEVYQLEGGIITYGED  212 (314)
T ss_pred             HHHHH---hcCCCCcCeEEEECCCCcHHHHHHHHHHHcCCCcEEEecchHHHHHHh
Confidence            22222   235678999999999999999999999999999999999999999875

>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily

Probab=99.86  E-value=6.4e-22  Score=159.52  Aligned_cols=104  Identities=30%  Similarity=0.534  Sum_probs=92.3

Q ss_pred             CHHHHHHHhh-CCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCc
Q 017338          247 TLEQVKRNIE-EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKP  325 (373)
Q Consensus       247 s~~el~~~~~-~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~  325 (373)
                      |++++.++++ .++.+|||+|++.+|           ..||||||+|+|+.++.+.  ...+++++++.+...+++++++
T Consensus         2 ~~~~~~~~l~~~~~~~iiDvR~~~e~-----------~~ghIpgA~~ip~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   68 (106)
T cd01519           2 SFEEVKNLPNPHPNKVLIDVREPEEL-----------KTGKIPGAINIPLSSLPDA--LALSEEEFEKKYGFPKPSKDKE   68 (106)
T ss_pred             cHHHHHHhcCCCCCEEEEECCCHHHH-----------hcCcCCCcEEechHHhhhh--hCCCHHHHHHHhcccCCCCCCe
Confidence            4678888887 667999999999999           7899999999999886542  3456788999998888899999


Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhc
Q 017338          326 VVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA  363 (373)
Q Consensus       326 IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~  363 (373)
                      ||+||++|.+|..+++.|+.+||++|++|+||+.+|.+
T Consensus        69 ivv~c~~g~~s~~~~~~l~~~G~~~v~~~~Gg~~~W~~  106 (106)
T cd01519          69 LIFYCKAGVRSKAAAELARSLGYENVGNYPGSWLDWAA  106 (106)
T ss_pred             EEEECCCcHHHHHHHHHHHHcCCccceecCCcHHHHcC
Confidence            99999999999999999999999999999999999963

This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.

>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain

Probab=99.86  E-value=1.3e-21  Score=161.91  Aligned_cols=115  Identities=24%  Similarity=0.350  Sum_probs=97.1

Q ss_pred             cCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCccccccc----CCCCCCHHHHHHHHHHcCCC
Q 017338          246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA----SQTLLPADELKKRFEQEGIS  321 (373)
Q Consensus       246 is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~----~~~~~~~~~l~~~~~~~gi~  321 (373)
                      ++++++.+.+.+++.+|||+|++.+|.+    ....+..||||||+|+|+.++...    .+.+++.+++++.+.+.+++
T Consensus         2 i~~~~l~~~l~~~~~~ivDvR~~~~~~~----~~~~~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (122)
T cd01448           2 VSPDWLAEHLDDPDVRILDARWYLPDRD----GRKEYLEGHIPGAVFFDLDEDLDDKSPGPHMLPSPEEFAELLGSLGIS   77 (122)
T ss_pred             cCHHHHHHHhCCCCeEEEEeecCCCCCc----hhhHHhhCCCCCCEEcChhhccccCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            6789999998877789999999933311    000117899999999999887642    46788999999999999999


Q ss_pred             CCCcEEEEcCC-chHHHHHHHHHHHcCCCCceeecccHHHHhcC
Q 017338          322 LEKPVVTACGT-GVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       322 ~~~~IvvyC~~-G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~  364 (373)
                      ++++||+||++ |.+|..+++.|+.+||++|++|+|||.+|...
T Consensus        78 ~~~~vv~~c~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~  121 (122)
T cd01448          78 NDDTVVVYDDGGGFFAARAWWTLRYFGHENVRVLDGGLQAWKAE  121 (122)
T ss_pred             CCCEEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHhC
Confidence            99999999999 59999999999999999999999999999875

TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.

>PLN02160 thiosulfate sulfurtransferase

Probab=99.86  E-value=1.7e-21  Score=164.28  Aligned_cols=113  Identities=18%  Similarity=0.302  Sum_probs=94.8

Q ss_pred             cccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCC--cccCcccccccCCCCCCHHHHHHHHHHcCCC
Q 017338          244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGS--KCIPFPQMLDASQTLLPADELKKRFEQEGIS  321 (373)
Q Consensus       244 ~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA--~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~  321 (373)
                      ..++++++.+.+++ +.+|||||++.||           ..||||||  +|+|+..+. ....+++.+.+.++..  .++
T Consensus        15 ~~i~~~e~~~~~~~-~~~lIDVR~~~E~-----------~~ghIpgA~~iniP~~~~~-~~~~l~~~~~~~~~~~--~~~   79 (136)
T PLN02160         15 VSVDVSQAKTLLQS-GHQYLDVRTQDEF-----------RRGHCEAAKIVNIPYMLNT-PQGRVKNQEFLEQVSS--LLN   79 (136)
T ss_pred             eEeCHHHHHHHHhC-CCEEEECCCHHHH-----------hcCCCCCcceecccchhcC-cccccCCHHHHHHHHh--ccC
Confidence            35788999988875 4689999999999           78999999  899986653 3345666555554433  367


Q ss_pred             CCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          322 LEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       322 ~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      ++++||+||++|.||..++..|...||++|++|+|||.+|... |+|+++.
T Consensus        80 ~~~~IivyC~sG~RS~~Aa~~L~~~G~~~v~~l~GG~~~W~~~-g~p~~~~  129 (136)
T PLN02160         80 PADDILVGCQSGARSLKATTELVAAGYKKVRNKGGGYLAWVDH-SFPINQE  129 (136)
T ss_pred             CCCcEEEECCCcHHHHHHHHHHHHcCCCCeeecCCcHHHHhhC-CCCcccc
Confidence            8899999999999999999999999999999999999999999 9999865

>KOG1530 consensus Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.86  E-value=9.9e-22  Score=158.56  Aligned_cols=115  Identities=26%  Similarity=0.410  Sum_probs=98.4

Q ss_pred             CccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCC
Q 017338          242 PHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  321 (373)
Q Consensus       242 ~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~  321 (373)
                      ....++.++++++++.++.++||||+++||           ..||||.++|||+...... +. .+..+|.+.+.....+
T Consensus        21 ~~~sv~~~qvk~L~~~~~~~llDVRepeEf-----------k~gh~~~siNiPy~~~~~~-~~-l~~~eF~kqvg~~kp~   87 (136)
T KOG1530|consen   21 NPQSVSVEQVKNLLQHPDVVLLDVREPEEF-----------KQGHIPASINIPYMSRPGA-GA-LKNPEFLKQVGSSKPP   87 (136)
T ss_pred             CcEEEEHHHHHHHhcCCCEEEEeecCHHHh-----------hccCCcceEeccccccccc-cc-cCCHHHHHHhcccCCC
Confidence            345678999999999888999999999999           8999999999999654332 22 3456777777776677


Q ss_pred             CCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCc
Q 017338          322 LEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE  370 (373)
Q Consensus       322 ~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~  370 (373)
                      .|++|||||.+|.||..|...|..+||+||.+|.|||.+|.++ +.|..
T Consensus        88 ~d~eiIf~C~SG~Rs~~A~~~l~s~Gyknv~ny~Gs~~~W~~k-~~~~~  135 (136)
T KOG1530|consen   88 HDKEIIFGCASGVRSLKATKILVSAGYKNVGNYPGSYLAWVDK-GGPKK  135 (136)
T ss_pred             CCCcEEEEeccCcchhHHHHHHHHcCcccccccCccHHHHHHc-cCCCC
Confidence            7889999999999999999999999999999999999999999 66654

>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional

Probab=99.85  E-value=2.5e-21  Score=183.04  Aligned_cols=127  Identities=18%  Similarity=0.296  Sum_probs=105.7

Q ss_pred             cccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccC----CCCCCHHHHHHHHHHcC
Q 017338          244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLPADELKKRFEQEG  319 (373)
Q Consensus       244 ~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~----~~~~~~~~l~~~~~~~g  319 (373)
                      +++++++|.+++++++++|||+|+..++.|.... ...++.||||||+|+|+..+.+..    ..+++++++++.+.++|
T Consensus         5 ~lvs~~~l~~~l~~~~~~iiD~R~~~~~~~~~~~-~~~y~~GHIpGA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G   83 (281)
T PRK11493          5 WFVAADWLAEHIDDPEIQIIDARMAPPGQEDRDV-AAEYRAGHIPGAVFFDIEALSDHTSPLPHMMPRPETFAVAMRELG   83 (281)
T ss_pred             cccCHHHHHHhcCCCCeEEEEeeCCCCCccccch-HHHHHhCcCCCCEEcCHHHhcCCCCCCCCCCCCHHHHHHHHHHcC
Confidence            5789999999999888999999986555443111 122378999999999998765533    24567899999999999


Q ss_pred             CCCCCcEEEEcCCch-HHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          320 ISLEKPVVTACGTGV-TACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       320 i~~~~~IvvyC~~G~-ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      ++++++||+||.+|. .++.+++.|+.+||++|++|+|||.+|.++ |+|++++
T Consensus        84 i~~d~~VVvyc~~~~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~-g~p~~~~  136 (281)
T PRK11493         84 VNQDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSILAGGLAGWQRD-DLLLEEG  136 (281)
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHhcCCcEEEcCCCHHHHHHc-CCCccCC
Confidence            999999999999876 467889999999999999999999999998 9999875

>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily

Probab=99.84  E-value=5.6e-21  Score=153.97  Aligned_cols=104  Identities=21%  Similarity=0.298  Sum_probs=90.9

Q ss_pred             cHHHHHHhcC-CCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 017338           79 SVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENK  157 (373)
Q Consensus        79 s~~~l~~~l~-~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~~  157 (373)
                      |++++.++++ +++++|||+|         +..+|..||||||+|+|+..+.+      ...++++.|++.++..+++++
T Consensus         2 ~~~~~~~~l~~~~~~~iiDvR---------~~~e~~~ghIpgA~~ip~~~~~~------~~~~~~~~~~~~~~~~~~~~~   66 (106)
T cd01519           2 SFEEVKNLPNPHPNKVLIDVR---------EPEELKTGKIPGAINIPLSSLPD------ALALSEEEFEKKYGFPKPSKD   66 (106)
T ss_pred             cHHHHHHhcCCCCCEEEEECC---------CHHHHhcCcCCCcEEechHHhhh------hhCCCHHHHHHHhcccCCCCC
Confidence            6789999888 6679999996         45899999999999999987643      234567889999999999999


Q ss_pred             CeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHh
Q 017338          158 DGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (373)
Q Consensus       158 ~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~  198 (373)
                      ++||+||..|.+ +.+++++|+.+||++|++|+||+.+|.+
T Consensus        67 ~~ivv~c~~g~~-s~~~~~~l~~~G~~~v~~~~Gg~~~W~~  106 (106)
T cd01519          67 KELIFYCKAGVR-SKAAAELARSLGYENVGNYPGSWLDWAA  106 (106)
T ss_pred             CeEEEECCCcHH-HHHHHHHHHHcCCccceecCCcHHHHcC
Confidence            999999998764 8999999999999999999999999963

This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.

>TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein

Probab=99.84  E-value=1.4e-20  Score=163.37  Aligned_cols=115  Identities=17%  Similarity=0.220  Sum_probs=91.5

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCCh---hhhhh---------CCCcCceecCcccccccCCCCCCCCCCH
Q 017338           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPF---QEYQV---------AHIPGALFFDVDGVADRTTNLPHMLPSE  142 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~---~ey~~---------gHIpGAi~ip~~~l~~~~~~~~~~l~~~  142 (373)
                      ...|+++|+.+++++++++|||||        ++.   .+|..         +|||||+|+|+..+....      -+..
T Consensus        35 ~~~vs~~el~~~l~~~~~~lIDVR--------~~~~~~~e~~~G~~~~~~~~~HIPGAv~ip~~~~~~l~------~~~~  100 (162)
T TIGR03865        35 ARVLDTEAAQALLARGPVALIDVY--------PRPPKPKNLLEGTVWRDEPRLNIPGSLWLPNTGYGNLA------PAWQ  100 (162)
T ss_pred             ccccCHHHHHHHHhCCCcEEEECC--------CCccccccccccceeccccCCCCCCcEEecccCCCCCC------Cchh
Confidence            568999999999988889999997        221   13433         599999999965332211      1233


Q ss_pred             HHHHHHHHHcCC-CCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCc
Q 017338          143 EAFAAAVSALGL-ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  203 (373)
Q Consensus       143 e~~~~~l~~~gi-~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv  203 (373)
                      +.|.+.+..+++ +++++||+||..|+.++.+++|+|+.+||++|++|+||+.+|+++|+|+
T Consensus       101 ~~~~~~l~~~~~~~~d~~IVvYC~~G~~~S~~aa~~L~~~G~~~V~~l~GG~~aW~~aG~Pv  162 (162)
T TIGR03865       101 AYFRRGLERATGGDKDRPLVFYCLADCWMSWNAAKRALAYGYSNVYWYPDGTDGWQAAGLPL  162 (162)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEECCCCHHHHHHHHHHHhcCCcceEEecCCHHHHHHcCCCC
Confidence            457777777664 7899999999988767999999999999999999999999999999985

Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes.

>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily

Probab=99.84  E-value=4.1e-21  Score=153.70  Aligned_cols=99  Identities=16%  Similarity=0.188  Sum_probs=83.0

Q ss_pred             ccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCC
Q 017338          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (373)
Q Consensus       245 ~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~  324 (373)
                      .++++++.+.+.+++.+|||||++.||           ..||||||+|+|+.++.+.      .+.+.+.+   .+++++
T Consensus         3 ~is~~~l~~~~~~~~~~iiDvR~~~e~-----------~~ghi~gA~~ip~~~~~~~------~~~~~~~~---~~~~~~   62 (101)
T cd01518           3 YLSPAEWNELLEDPEVVLLDVRNDYEY-----------DIGHFKGAVNPDVDTFREF------PFWLDENL---DLLKGK   62 (101)
T ss_pred             cCCHHHHHHHHcCCCEEEEEcCChhhh-----------hcCEeccccCCCcccHhHh------HHHHHhhh---hhcCCC
Confidence            478899999888778999999999999           7899999999999775321      12232222   247899


Q ss_pred             cEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhc
Q 017338          325 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA  363 (373)
Q Consensus       325 ~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~  363 (373)
                      +|||||.+|.||..++..|+.+||++|++++||+.+|..
T Consensus        63 ~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~  101 (101)
T cd01518          63 KVLMYCTGGIRCEKASAYLKERGFKNVYQLKGGILKYLE  101 (101)
T ss_pred             EEEEECCCchhHHHHHHHHHHhCCcceeeechhHHHHhC
Confidence            999999999999999999999999999999999999963

This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.

>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain

Probab=99.84  E-value=8e-21  Score=156.16  Aligned_cols=107  Identities=27%  Similarity=0.490  Sum_probs=92.9

Q ss_pred             ccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhh-----------CCCcCceecCcccccccCCCCCCCCCCHHHHH
Q 017338           78 VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV-----------AHIPGALFFDVDGVADRTTNLPHMLPSEEAFA  146 (373)
Q Consensus        78 is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~-----------gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~  146 (373)
                      ||+++|.+++++++++|||+|         +..+|..           ||||||+|+|+..+....    +++++++.|.
T Consensus         1 ~s~~~l~~~l~~~~~~iiDvR---------~~~e~~~~~~~~~~~~~~ghIpgA~~~p~~~~~~~~----~~~~~~~~~~   67 (118)
T cd01449           1 VTAEEVLANLDSGDVQLVDAR---------SPERFRGEVPEPRPGLRSGHIPGAVNIPWTSLLDED----GTFKSPEELR   67 (118)
T ss_pred             CCHHHHHHhcCCCCcEEEeCC---------CHHHcCCcCCCCCCCCcCCcCCCCcccChHHhcCCC----CCcCCHHHHH
Confidence            578999999987679999997         3466665           999999999998765422    5688899999


Q ss_pred             HHHHHcCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHh
Q 017338          147 AAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (373)
Q Consensus       147 ~~l~~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~  198 (373)
                      +.+..++++++++||+||..|. ++.++++.|+.+||++|++|+||+.+|.+
T Consensus        68 ~~~~~~~~~~~~~iv~yc~~g~-~s~~~~~~l~~~G~~~v~~l~GG~~~W~~  118 (118)
T cd01449          68 ALFAALGITPDKPVIVYCGSGV-TACVLLLALELLGYKNVRLYDGSWSEWGS  118 (118)
T ss_pred             HHHHHcCCCCCCCEEEECCcHH-HHHHHHHHHHHcCCCCeeeeCChHHHhcC
Confidence            9999999999999999999754 59999999999999999999999999963

TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.

>TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein

Probab=99.84  E-value=1.6e-20  Score=163.02  Aligned_cols=122  Identities=18%  Similarity=0.273  Sum_probs=92.5

Q ss_pred             cCCccccCHHHHHHHhhCCCcEEEEecCCC----cc-CCCCCCCCCCCCcccCCCCcccCcccccccCCCCCC--HHHHH
Q 017338          240 FQPHLIWTLEQVKRNIEEGTYQLVDARSKA----RF-DGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLP--ADELK  312 (373)
Q Consensus       240 ~~~~~~is~~el~~~~~~~~~~iIDvR~~~----e~-~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~--~~~l~  312 (373)
                      ......|+++|+.+++++++.+|||+|++.    +| .|....   ....||||||+|+|+..+.    .+.+  .+.+.
T Consensus        32 ~~~~~~vs~~el~~~l~~~~~~lIDVR~~~~~~~e~~~G~~~~---~~~~~HIPGAv~ip~~~~~----~l~~~~~~~~~  104 (162)
T TIGR03865        32 LKGARVLDTEAAQALLARGPVALIDVYPRPPKPKNLLEGTVWR---DEPRLNIPGSLWLPNTGYG----NLAPAWQAYFR  104 (162)
T ss_pred             cCCccccCHHHHHHHHhCCCcEEEECCCCccccccccccceec---cccCCCCCCcEEecccCCC----CCCCchhHHHH
Confidence            344567999999999988889999999876    33 121000   0023699999999974321    1222  23466


Q ss_pred             HHHHHcCC-CCCCcEEEEcCCch-HHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCC
Q 017338          313 KRFEQEGI-SLEKPVVTACGTGV-TACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPV  369 (373)
Q Consensus       313 ~~~~~~gi-~~~~~IvvyC~~G~-ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv  369 (373)
                      +.+.+.+. +++++||+||++|. +|..+++.|+.+||++|++|+|||.+|..+ |+|+
T Consensus       105 ~~l~~~~~~~~d~~IVvYC~~G~~~S~~aa~~L~~~G~~~V~~l~GG~~aW~~a-G~Pv  162 (162)
T TIGR03865       105 RGLERATGGDKDRPLVFYCLADCWMSWNAAKRALAYGYSNVYWYPDGTDGWQAA-GLPL  162 (162)
T ss_pred             HHHHHhcCCCCCCEEEEEECCCCHHHHHHHHHHHhcCCcceEEecCCHHHHHHc-CCCC
Confidence            77766544 79999999999997 788899999999999999999999999999 9986

Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes.

>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2

Probab=99.83  E-value=1.7e-20  Score=152.26  Aligned_cols=96  Identities=20%  Similarity=0.297  Sum_probs=83.2

Q ss_pred             ccCHHHHHHHhhCC-CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCC
Q 017338          245 IWTLEQVKRNIEEG-TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (373)
Q Consensus       245 ~is~~el~~~~~~~-~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~  323 (373)
                      .++++++.+.++++ +.+|||+|++.||           ..||||||+|+|+.++.             ..+...+.+++
T Consensus        11 ~i~~~~l~~~~~~~~~~~liDvR~~~e~-----------~~ghIpgainip~~~l~-------------~~~~~l~~~~~   66 (109)
T cd01533          11 SVSADELAALQARGAPLVVLDGRRFDEY-----------RKMTIPGSVSCPGAELV-------------LRVGELAPDPR   66 (109)
T ss_pred             cCCHHHHHHHHhcCCCcEEEeCCCHHHH-----------hcCcCCCceeCCHHHHH-------------HHHHhcCCCCC
Confidence            57899999988755 5789999999999           78999999999986543             33444456778


Q ss_pred             CcEEEEcCCchHHHHHHHHHHHcCCCC-ceeecccHHHHhcC
Q 017338          324 KPVVTACGTGVTACILALGLNRLGKHD-VAVYDGSWTEWGAQ  364 (373)
Q Consensus       324 ~~IvvyC~~G~ra~~a~~~L~~~G~~~-v~~~~GG~~~W~~~  364 (373)
                      ++||+||.+|.||..++..|+.+||+| |++++||+.+|...
T Consensus        67 ~~ivv~C~~G~rs~~a~~~L~~~G~~~~v~~l~gG~~~W~~~  108 (109)
T cd01533          67 TPIVVNCAGRTRSIIGAQSLINAGLPNPVAALRNGTQGWTLA  108 (109)
T ss_pred             CeEEEECCCCchHHHHHHHHHHCCCCcceeEecCCHHHHHhc
Confidence            999999999999999999999999988 99999999999876

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.

>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2

Probab=99.83  E-value=2.6e-20  Score=151.18  Aligned_cols=99  Identities=26%  Similarity=0.267  Sum_probs=85.2

Q ss_pred             CCcccHHHHHHhcCCC-CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           75 EPVVSVDWLHANLREP-DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~-~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      .+.|++++|.++++++ +.+|||+|         +..+|..||||||+|+|+..+                 ...+..++
T Consensus         9 ~~~i~~~~l~~~~~~~~~~~liDvR---------~~~e~~~ghIpgainip~~~l-----------------~~~~~~l~   62 (109)
T cd01533           9 TPSVSADELAALQARGAPLVVLDGR---------RFDEYRKMTIPGSVSCPGAEL-----------------VLRVGELA   62 (109)
T ss_pred             CCcCCHHHHHHHHhcCCCcEEEeCC---------CHHHHhcCcCCCceeCCHHHH-----------------HHHHHhcC
Confidence            4579999999998765 57899996         458999999999999998653                 34667777


Q ss_pred             CCCCCeEEEEcCCCCchHHHHHHHHHHcCCCc-eEEecCCHHHHHhCC
Q 017338          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDR-VWVLDGGLPRWRASG  200 (373)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~-v~~L~GG~~~W~~~g  200 (373)
                      .+++++||+||..|.+ +.++++.|+.+||++ |++|+||+.+|.++|
T Consensus        63 ~~~~~~ivv~C~~G~r-s~~a~~~L~~~G~~~~v~~l~gG~~~W~~~g  109 (109)
T cd01533          63 PDPRTPIVVNCAGRTR-SIIGAQSLINAGLPNPVAALRNGTQGWTLAG  109 (109)
T ss_pred             CCCCCeEEEECCCCch-HHHHHHHHHHCCCCcceeEecCCHHHHHhcC
Confidence            7788999999998775 888999999999998 999999999999875

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.

>PLN02723 3-mercaptopyruvate sulfurtransferase

Probab=99.83  E-value=2.6e-20  Score=179.10  Aligned_cols=120  Identities=22%  Similarity=0.353  Sum_probs=104.1

Q ss_pred             CCccccCHHHHHHHhhCCCcEEEEecC---------CCccCCCCCCCCCCCCcccCCCCcccCcccccccC----CCCCC
Q 017338          241 QPHLIWTLEQVKRNIEEGTYQLVDARS---------KARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLP  307 (373)
Q Consensus       241 ~~~~~is~~el~~~~~~~~~~iIDvR~---------~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~----~~~~~  307 (373)
                      ++..+|++++|.+++++++.+|||+|.         ..+|           ..||||||+|+|+.++.+..    ..+++
T Consensus        19 ~~~~lvs~~~L~~~l~~~~~~IiDvr~~~~~~~r~~~~~y-----------~~gHIPgAi~i~~~~~~~~~~~~~~~lp~   87 (320)
T PLN02723         19 TNEPVVSVDWLHANLREPDVKVLDASWYMPDEQRNPIQEY-----------QVAHIPGALFFDLDGISDRTTDLPHMLPS   87 (320)
T ss_pred             cCCceecHHHHHHHhcCCCeEEEEeeccccCCCCchHHHH-----------HhccCCCCeecCHHHhcCCCCCcCCCCCC
Confidence            355789999999999888899999972         2466           78999999999998776542    35678


Q ss_pred             HHHHHHHHHHcCCCCCCcEEEEcCCch-HHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          308 ADELKKRFEQEGISLEKPVVTACGTGV-TACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       308 ~~~l~~~~~~~gi~~~~~IvvyC~~G~-ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      .++|++.+.++|++++++|||||..|. .+.+++|.|+.+||++|++|+||+.+|..+ |+|++++
T Consensus        88 ~~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~~V~~LdGG~~~W~~~-G~pv~~~  152 (320)
T PLN02723         88 EEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHEKVWVLDGGLPKWRAS-GYDVESS  152 (320)
T ss_pred             HHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHcCCCceEEcCCCHHHHHHc-CCCcccC
Confidence            899999999999999999999998875 567889999999999999999999999999 9999875

>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily

Probab=99.82  E-value=2.3e-20  Score=148.68  Aligned_cols=97  Identities=20%  Similarity=0.373  Sum_probs=85.1

Q ss_pred             ccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCC
Q 017338          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (373)
Q Consensus       245 ~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~  324 (373)
                      .++++|+.+.++++ .+|||+|++++|           ..||||||+|+|+..+.....               .+++++
T Consensus         3 ~i~~~el~~~~~~~-~~liDvR~~~e~-----------~~~hi~ga~~ip~~~~~~~~~---------------~~~~~~   55 (99)
T cd01527           3 TISPNDACELLAQG-AVLVDIREPDEY-----------LRERIPGARLVPLSQLESEGL---------------PLVGAN   55 (99)
T ss_pred             ccCHHHHHHHHHCC-CEEEECCCHHHH-----------HhCcCCCCEECChhHhccccc---------------CCCCCC
Confidence            36789999888765 899999999999           789999999999987643211               367889


Q ss_pred             cEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCC
Q 017338          325 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPV  369 (373)
Q Consensus       325 ~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv  369 (373)
                      +||+||.+|.+|+.++..|+++||.+|++|+||+.+|... ++|+
T Consensus        56 ~iv~~c~~g~~s~~~~~~L~~~g~~~v~~l~gG~~~W~~~-~~~~   99 (99)
T cd01527          56 AIIFHCRSGMRTQQNAERLAAISAGEAYVLEGGLDAWKAA-GLPV   99 (99)
T ss_pred             cEEEEeCCCchHHHHHHHHHHcCCccEEEeeCCHHHHHHC-cCCC
Confidence            9999999999999999999999999999999999999998 8885

This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.

>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily

Probab=99.82  E-value=2.8e-20  Score=155.50  Aligned_cols=105  Identities=24%  Similarity=0.399  Sum_probs=83.3

Q ss_pred             cCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccC--C-CC--------------CCH
Q 017338          246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS--Q-TL--------------LPA  308 (373)
Q Consensus       246 is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~--~-~~--------------~~~  308 (373)
                      ||++|+.++++ ++.+|||||++.||           ..||||||+|||+..+....  + .+              ...
T Consensus         1 ~s~~el~~~l~-~~~~iiDvR~~~e~-----------~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (128)
T cd01520           1 ITAEDLLALRK-ADGPLIDVRSPKEF-----------FEGHLPGAINLPLLDDEERALVGTLYKQQGREAAIELGLELVS   68 (128)
T ss_pred             CCHHHHHHHHh-cCCEEEECCCHHHh-----------ccCcCCCcEEccCCChhHHHHhhhheeccCHHHHHHHHHHHHh
Confidence            57789998887 57899999999999           78999999999997543211  0 00              111


Q ss_pred             HHHHHHHHH---cCCCCCCcEEEEcC-CchHHHHHHHHHHHcCCCCceeecccHHHHhc
Q 017338          309 DELKKRFEQ---EGISLEKPVVTACG-TGVTACILALGLNRLGKHDVAVYDGSWTEWGA  363 (373)
Q Consensus       309 ~~l~~~~~~---~gi~~~~~IvvyC~-~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~  363 (373)
                      .++++.+.+   .+++++++||+||. +|.||..+++.|+.+|| +|++++||+.+|..
T Consensus        69 ~~~~~~~~~~~~~~i~~~~~vvvyC~~~G~rs~~a~~~L~~~G~-~v~~L~GG~~aw~~  126 (128)
T cd01520          69 GKLKRILNEAWEARLERDPKLLIYCARGGMRSQSLAWLLESLGI-DVPLLEGGYKAYRK  126 (128)
T ss_pred             hhHHHHHHHHHHhccCCCCeEEEEeCCCCccHHHHHHHHHHcCC-ceeEeCCcHHHHHh
Confidence            334444443   48999999999996 68999999999999999 69999999999975

This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.

>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional

Probab=99.82  E-value=3.8e-20  Score=190.90  Aligned_cols=117  Identities=22%  Similarity=0.304  Sum_probs=105.4

Q ss_pred             cccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCccccccc----CCCCCCHHHHHHHHHHcC
Q 017338          244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA----SQTLLPADELKKRFEQEG  319 (373)
Q Consensus       244 ~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~----~~~~~~~~~l~~~~~~~g  319 (373)
                      .+|+++|+.+++++++.+|||+|++++|           ..||||||+|+|+..+...    .+.+++.+++++.+.++|
T Consensus         9 ~lIs~~eL~~~l~~~~vvIIDvR~~~eY-----------~~GHIPGAv~i~~~~~~~~~~~~~~~lp~~~~l~~~l~~lG   77 (610)
T PRK09629          9 LVIEPNDLLERLDAPELILVDLTSSARY-----------EAGHIRGARFVDPKRTQLGKPPAPGLLPDTADLEQLFGELG   77 (610)
T ss_pred             ceecHHHHHHHhcCCCEEEEECCChHHH-----------HhCCCCCcEEcChhHhhccCCCCCCCCCCHHHHHHHHHHcC
Confidence            5799999999999888999999999999           7899999999998764322    256778899999999999


Q ss_pred             CCCCCcEEEEcCCc-hHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          320 ISLEKPVVTACGTG-VTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       320 i~~~~~IvvyC~~G-~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      ++++++||+||++| .+|++++|.|+.+|+++|++|||||.+|..+ |+|++++
T Consensus        78 I~~d~~VVvYd~~g~~~A~R~~w~L~~~G~~~V~iLdGG~~aW~~a-g~p~~~~  130 (610)
T PRK09629         78 HNPDAVYVVYDDEGGGWAGRFIWLLDVIGHSGYHYLDGGVLAWEAQ-ALPLSTD  130 (610)
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHcCCCCEEEcCCCHHHHHHc-CCccccC
Confidence            99999999999976 5888999999999999999999999999999 9999765

>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily

Probab=99.82  E-value=5.8e-20  Score=147.01  Aligned_cols=99  Identities=23%  Similarity=0.326  Sum_probs=79.8

Q ss_pred             CcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 017338           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (373)
Q Consensus        76 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~  155 (373)
                      ..|++++|.+++.+++++|||||         +..||+.||||||+|+|+..+...          .+.+.+.   ...+
T Consensus         2 ~~is~~~l~~~~~~~~~~iiDvR---------~~~e~~~ghi~gA~~ip~~~~~~~----------~~~~~~~---~~~~   59 (101)
T cd01518           2 TYLSPAEWNELLEDPEVVLLDVR---------NDYEYDIGHFKGAVNPDVDTFREF----------PFWLDEN---LDLL   59 (101)
T ss_pred             CcCCHHHHHHHHcCCCEEEEEcC---------ChhhhhcCEeccccCCCcccHhHh----------HHHHHhh---hhhc
Confidence            56999999999988789999996         448999999999999999875321          1112211   1236


Q ss_pred             CCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHH
Q 017338          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (373)
Q Consensus       156 ~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~  197 (373)
                      ++++||+||..|.+ +..+++.|+.+||++|++|+||+.+|.
T Consensus        60 ~~~~ivvyC~~G~r-s~~a~~~L~~~G~~~v~~l~GG~~~W~  100 (101)
T cd01518          60 KGKKVLMYCTGGIR-CEKASAYLKERGFKNVYQLKGGILKYL  100 (101)
T ss_pred             CCCEEEEECCCchh-HHHHHHHHHHhCCcceeeechhHHHHh
Confidence            88999999998776 777788899999999999999999996

This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.

>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily

Probab=99.81  E-value=9.4e-20  Score=152.29  Aligned_cols=110  Identities=23%  Similarity=0.365  Sum_probs=81.8

Q ss_pred             ccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCC--------------CCCCCCCCH-
Q 017338           78 VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT--------------NLPHMLPSE-  142 (373)
Q Consensus        78 is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~--------------~~~~~l~~~-  142 (373)
                      ||++||.++++ ++++|||||        + .++|..||||||+|+|+..+.....              ..+.+++.. 
T Consensus         1 ~s~~el~~~l~-~~~~iiDvR--------~-~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (128)
T cd01520           1 ITAEDLLALRK-ADGPLIDVR--------S-PKEFFEGHLPGAINLPLLDDEERALVGTLYKQQGREAAIELGLELVSGK   70 (128)
T ss_pred             CCHHHHHHHHh-cCCEEEECC--------C-HHHhccCcCCCcEEccCCChhHHHHhhhheeccCHHHHHHHHHHHHhhh
Confidence            68999999998 578999996        4 5899999999999999965322100              001112211 


Q ss_pred             -HHHHHHHHHcCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHh
Q 017338          143 -EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (373)
Q Consensus       143 -e~~~~~l~~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~  198 (373)
                       +++.+.+...+++++++||+||..++.+|.+++|+|+.+|| +|++|+||+.+|++
T Consensus        71 ~~~~~~~~~~~~i~~~~~vvvyC~~~G~rs~~a~~~L~~~G~-~v~~L~GG~~aw~~  126 (128)
T cd01520          71 LKRILNEAWEARLERDPKLLIYCARGGMRSQSLAWLLESLGI-DVPLLEGGYKAYRK  126 (128)
T ss_pred             HHHHHHHHHHhccCCCCeEEEEeCCCCccHHHHHHHHHHcCC-ceeEeCCcHHHHHh
Confidence             22333333358999999999998555569999999999999 69999999999975

This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.

>PRK00162 glpE thiosulfate sulfurtransferase; Validated

Probab=99.81  E-value=1.1e-19  Score=147.34  Aligned_cols=101  Identities=26%  Similarity=0.357  Sum_probs=88.6

Q ss_pred             ccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCC
Q 017338          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (373)
Q Consensus       245 ~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~  324 (373)
                      .++++++.+.+++++.+|||+|++.+|           ..||||||+|+|+..+             .+.+..  +++++
T Consensus         6 ~is~~el~~~l~~~~~~ivDvR~~~e~-----------~~ghi~gA~~ip~~~l-------------~~~~~~--~~~~~   59 (108)
T PRK00162          6 CINVEQAHQKLQEGGAVLVDIRDPQSF-----------AMGHAPGAFHLTNDSL-------------GAFMRQ--ADFDT   59 (108)
T ss_pred             ccCHHHHHHHHHcCCCEEEEcCCHHHH-----------hcCCCCCCeECCHHHH-------------HHHHHh--cCCCC
Confidence            478899999887777899999999999           7899999999998543             334443  67889


Q ss_pred             cEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          325 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       325 ~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +|++||.+|.+|..++..|+..||+||++++|||.+|... ++|++.+
T Consensus        60 ~ivv~c~~g~~s~~a~~~L~~~G~~~v~~l~GG~~~w~~~-~~~~~~~  106 (108)
T PRK00162         60 PVMVMCYHGNSSQGAAQYLLQQGFDVVYSIDGGFEAWRRT-FPAEVAS  106 (108)
T ss_pred             CEEEEeCCCCCHHHHHHHHHHCCchheEEecCCHHHHHhc-CCCccCC
Confidence            9999999999999999999999999999999999999998 8999864

>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily

Probab=99.80  E-value=2.3e-19  Score=144.40  Aligned_cols=102  Identities=22%  Similarity=0.264  Sum_probs=80.2

Q ss_pred             ccHHHHHHhcCCC--CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 017338           78 VSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (373)
Q Consensus        78 is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~  155 (373)
                      ||++||+++++++  +++|||+|         +..+|..||||||+|+|+..+....... ..+|..+.|..       .
T Consensus         1 is~~~l~~~l~~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~~~~~~~~~-~~~~~~~~~~~-------~   63 (105)
T cd01525           1 ISVYDVIRLLDNSPAKLAAVDIR---------SSPDFRRGHIEGSINIPFSSVFLKEGEL-EQLPTVPRLEN-------Y   63 (105)
T ss_pred             CCHHHHHHHHhCCCCCeEEEECC---------CHHHHhCCccCCCEeCCHHHhccccccc-ccccchHHHHh-------h
Confidence            6899999999763  68999996         3489999999999999998754321111 33444444442       2


Q ss_pred             CCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHH
Q 017338          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (373)
Q Consensus       156 ~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~  197 (373)
                      .+++||+||..|.+ +.++++.|+.+||++|++|+||+.+|+
T Consensus        64 ~~~~vv~~c~~g~~-s~~~a~~L~~~G~~~v~~l~GG~~a~~  104 (105)
T cd01525          64 KGKIIVIVSHSHKH-AALFAAFLVKCGVPRVCILDGGINALK  104 (105)
T ss_pred             cCCeEEEEeCCCcc-HHHHHHHHHHcCCCCEEEEeCcHHHhc
Confidence            47889999998775 888999999999999999999999996

Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD.

>smart00450 RHOD Rhodanese Homology Domain

Probab=99.80  E-value=1.8e-19  Score=142.21  Aligned_cols=98  Identities=33%  Similarity=0.596  Sum_probs=85.1

Q ss_pred             CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCcEEEEcCCchHHH
Q 017338          258 GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTAC  337 (373)
Q Consensus       258 ~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~IvvyC~~G~ra~  337 (373)
                      ++++|||+|++.+|           ..||||||+|+|+..+......+. ..++++.+...+++++++||+||.+|.+|.
T Consensus         3 ~~~~ivDvR~~~e~-----------~~~hi~ga~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~iv~~c~~g~~a~   70 (100)
T smart00450        3 EKVVLLDVRSPEEY-----------EGGHIPGAVNIPLSELLDRRGELD-ILEFEELLKRLGLDKDKPVVVYCRSGNRSA   70 (100)
T ss_pred             CCEEEEECCCHHHh-----------ccCCCCCceeCCHHHhccCCCCcC-HHHHHHHHHHcCCCCCCeEEEEeCCCcHHH
Confidence            46899999999999           789999999999988765543332 236777777788999999999999999999


Q ss_pred             HHHHHHHHcCCCCceeecccHHHHhcCCCCC
Q 017338          338 ILALGLNRLGKHDVAVYDGSWTEWGAQPDTP  368 (373)
Q Consensus       338 ~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~P  368 (373)
                      .+++.|+.+||++|++|+||+.+|... +.|
T Consensus        71 ~~~~~l~~~G~~~v~~l~GG~~~w~~~-~~~  100 (100)
T smart00450       71 KAAWLLRELGFKNVYLLDGGYKEWSAA-GPP  100 (100)
T ss_pred             HHHHHHHHcCCCceEEecCCHHHHHhc-CCC
Confidence            999999999999999999999999988 554

An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.

>cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily

Probab=99.80  E-value=9.7e-20  Score=150.92  Aligned_cols=105  Identities=19%  Similarity=0.278  Sum_probs=87.0

Q ss_pred             cccCHHHHHHHhhC-CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCC
Q 017338          244 LIWTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  322 (373)
Q Consensus       244 ~~is~~el~~~~~~-~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~  322 (373)
                      ..++++++.+.+.+ .+.+|||+|++.||           ..||||||+|+|+..+.+....++..     .+...++++
T Consensus         8 ~~is~~el~~~~~~~~~~~ivDvR~~~e~-----------~~~hIpgai~ip~~~~~~~~~~~~~~-----~~~~~~~~~   71 (122)
T cd01526           8 ERVSVKDYKNILQAGKKHVLLDVRPKVHF-----------EICRLPEAINIPLSELLSKAAELKSL-----QELPLDNDK   71 (122)
T ss_pred             cccCHHHHHHHHhCCCCeEEEEcCCHHHh-----------hcccCCCCeEccHHHHhhhhhhhhhh-----hhcccccCC
Confidence            35789999998876 56889999999999           79999999999998875432221111     223346789


Q ss_pred             CCcEEEEcCCchHHHHHHHHHHHcCC-CCceeecccHHHHhcC
Q 017338          323 EKPVVTACGTGVTACILALGLNRLGK-HDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       323 ~~~IvvyC~~G~ra~~a~~~L~~~G~-~~v~~~~GG~~~W~~~  364 (373)
                      +++||+||++|.||..++..|+.+|| ++|+.|+||+.+|..+
T Consensus        72 ~~~ivv~C~~G~rs~~aa~~L~~~G~~~~v~~l~GG~~~W~~~  114 (122)
T cd01526          72 DSPIYVVCRRGNDSQTAVRKLKELGLERFVRDIIGGLKAWADK  114 (122)
T ss_pred             CCcEEEECCCCCcHHHHHHHHHHcCCccceeeecchHHHHHHH
Confidence            99999999999999999999999999 7999999999999877

This CD includes several putative molybdopterin synthase sulfurylases including the molybdenum cofactor biosynthetic protein (CnxF) of Aspergillus nidulans and the molybdenum cofactor synthesis protein 3 (MOCS3) of Homo sapiens. These rhodanese-like domains are found C-terminal of the ThiF and MoeZ_MoeB domains.

>TIGR03167 tRNA_sel_U_synt tRNA 2-selenouridine synthase

Probab=99.80  E-value=1.1e-18  Score=166.01  Aligned_cols=191  Identities=17%  Similarity=0.242  Sum_probs=124.1

Q ss_pred             CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCC--------------CCCCCCCC---HHHHHHHHHHcC
Q 017338           91 DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT--------------NLPHMLPS---EEAFAAAVSALG  153 (373)
Q Consensus        91 ~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~--------------~~~~~l~~---~e~~~~~l~~~g  153 (373)
                      +..|||||        +| .||..||||||+|+|+....+...              .++..+..   ++.+.+++... 
T Consensus         2 ~~~liDVR--------sp-~Ef~~ghipgAiniPl~~~~er~~vgt~ykq~g~~~A~~lg~~~v~~~l~~~i~~~~~~~-   71 (311)
T TIGR03167         2 FDPLIDVR--------SP-AEFAEGHLPGAINLPLLNDEERAEVGTLYKQVGPFAAIKLGLALVSPNLAAHVEQWRAFA-   71 (311)
T ss_pred             CCEEEECC--------CH-HHHhcCCCcCCEecccccchhhhhhhhhhhcccHHHHHHHhHhhhhHHHHHHHHHHHhhc-
Confidence            46899996        44 899999999999999954221100              00000110   11223332322 


Q ss_pred             CCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcCcccCC
Q 017338          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP  233 (373)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (373)
                       +++..||+||..++.+|.+++|.|+.+|| +|++|+||+.+|+..+.+.....+                       .+
T Consensus        72 -~~~~~vvvyC~~gG~RS~~aa~~L~~~G~-~v~~L~GG~~aw~~~~~~~~~~~~-----------------------~~  126 (311)
T TIGR03167        72 -DGPPQPLLYCWRGGMRSGSLAWLLAQIGF-RVPRLEGGYKAYRRFVIDQLEELP-----------------------QP  126 (311)
T ss_pred             -CCCCcEEEEECCCChHHHHHHHHHHHcCC-CEEEecChHHHHHHhhhhhhhccC-----------------------CC
Confidence             34445999997555669999999999999 699999999999998886655421                       11


Q ss_pred             cceeeccCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCC-CCcccCcccccccCCCCCCHHHHH
Q 017338          234 TTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVP-GSKCIPFPQMLDASQTLLPADELK  312 (373)
Q Consensus       234 ~~~~~~~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIp-GA~~ip~~~l~~~~~~~~~~~~l~  312 (373)
                      ..+.. +.....+...++.+.+.+.+.+|||+|+..+|.|.        ..|||| |..  |-...+        ...|.
T Consensus       127 ~~~~v-l~g~tg~gKt~Ll~~L~~~~~~VvDlr~~a~hrGs--------~fG~~~~~~q--psq~~f--------e~~L~  187 (311)
T TIGR03167       127 FPLIV-LGGMTGSGKTELLHALANAGAQVLDLEGLANHRGS--------SFGALGLGPQ--PSQKRF--------ENALA  187 (311)
T ss_pred             Cceec-cCCCCCcCHHHHHHHHhcCCCeEEECCchHHhcCc--------ccCCCCCCCC--CchHHH--------HHHHH
Confidence            12222 22345678899999998888899999999999664        458888 421  211111        12333


Q ss_pred             HHHHHcCCCCCCcEEEEcCCchHHH
Q 017338          313 KRFEQEGISLEKPVVTACGTGVTAC  337 (373)
Q Consensus       313 ~~~~~~gi~~~~~IvvyC~~G~ra~  337 (373)
                      ..+.  .++++++|++-|.+...+.
T Consensus       188 ~~l~--~~~~~~~i~~e~es~~ig~  210 (311)
T TIGR03167       188 EALR--RLDPGRPIFVEDESRRIGR  210 (311)
T ss_pred             HHHH--hCCCCceEEEEeCchhhcc
Confidence            3343  3677889999998755433

The Escherichia coli YbbB protein was shown to encode a selenophosphate-dependent tRNA 2-selenouridine synthase, essential for modification of some tRNAs to replace a sulfur atom with selenium. This enzyme works with SelD, the selenium donor protein, which also acts in selenocysteine incorporation. Although the members of this protein family show a fairly deep split, sequences from both sides of the split are supported by co-occurence with, and often proximity to, the selD gene.

>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily

Probab=99.79  E-value=4.3e-19  Score=141.31  Aligned_cols=97  Identities=22%  Similarity=0.337  Sum_probs=82.6

Q ss_pred             cccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCC
Q 017338           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  156 (373)
Q Consensus        77 ~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~  156 (373)
                      .|++++|.++++++ .+|||+|         +.++|..||||||+|+|+..+...                   ...+++
T Consensus         3 ~i~~~el~~~~~~~-~~liDvR---------~~~e~~~~hi~ga~~ip~~~~~~~-------------------~~~~~~   53 (99)
T cd01527           3 TISPNDACELLAQG-AVLVDIR---------EPDEYLRERIPGARLVPLSQLESE-------------------GLPLVG   53 (99)
T ss_pred             ccCHHHHHHHHHCC-CEEEECC---------CHHHHHhCcCCCCEECChhHhccc-------------------ccCCCC
Confidence            58999999998875 8999996         458999999999999998875431                   113567


Q ss_pred             CCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCc
Q 017338          157 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  203 (373)
Q Consensus       157 ~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv  203 (373)
                      +++||+||..|.+ ++.++..|+.+||++|++|+||+.+|+..|+|+
T Consensus        54 ~~~iv~~c~~g~~-s~~~~~~L~~~g~~~v~~l~gG~~~W~~~~~~~   99 (99)
T cd01527          54 ANAIIFHCRSGMR-TQQNAERLAAISAGEAYVLEGGLDAWKAAGLPV   99 (99)
T ss_pred             CCcEEEEeCCCch-HHHHHHHHHHcCCccEEEeeCCHHHHHHCcCCC
Confidence            8899999998765 888999999999999999999999999999875

This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.

>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.79  E-value=4.2e-19  Score=165.60  Aligned_cols=120  Identities=21%  Similarity=0.370  Sum_probs=103.9

Q ss_pred             CCccccCHHHHHHHhhCC-----CcEEEEecCC--CccCCCCCCCCCCCCcccCCCCcccCcccccccC----CCCCCHH
Q 017338          241 QPHLIWTLEQVKRNIEEG-----TYQLVDARSK--ARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLPAD  309 (373)
Q Consensus       241 ~~~~~is~~el~~~~~~~-----~~~iIDvR~~--~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~----~~~~~~~  309 (373)
                      ...++++++++.+++.++     +..+++++..  .+|           ..||||||++++++...+..    +++++++
T Consensus         8 ~~~~lVs~~wl~~~l~~~~~~~~d~~~~~~~~~~~~~Y-----------~~~HIPGAv~~d~~~~~~~~~~~~~~lp~~e   76 (285)
T COG2897           8 SSEFLVSPDWLAENLDDPAVVIVDARIILPDPDDAEEY-----------LEGHIPGAVFFDWEADLSDPVPLPHMLPSPE   76 (285)
T ss_pred             CcceEEcHHHHHhhccccccccCceEEEeCCcchHHHH-----------HhccCCCCEecCHHHhhcCCCCCCCCCCCHH
Confidence            456789999999999866     4555555555  666           89999999999999876543    5789999


Q ss_pred             HHHHHHHHcCCCCCCcEEEEcCC-chHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          310 ELKKRFEQEGISLEKPVVTACGT-GVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       310 ~l~~~~~~~gi~~~~~IvvyC~~-G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +|.++|.++||+.|++||+|... +..|++++|.|+.+|++||++||||+.+|.++ |+|++++
T Consensus        77 ~fa~~~~~~GI~~d~tVVvYdd~~~~~A~ra~W~l~~~Gh~~V~iLdGG~~~W~~~-g~p~~~~  139 (285)
T COG2897          77 QFAKLLGELGIRNDDTVVVYDDGGGFFAARAWWLLRYLGHENVRILDGGLPAWKAA-GLPLETE  139 (285)
T ss_pred             HHHHHHHHcCCCCCCEEEEECCCCCeehHHHHHHHHHcCCCceEEecCCHHHHHHc-CCCccCC
Confidence            99999999999999999999955 55788999999999999999999999999999 9999865

>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily

Probab=99.79  E-value=2.8e-19  Score=143.82  Aligned_cols=99  Identities=26%  Similarity=0.350  Sum_probs=79.8

Q ss_pred             cCHHHHHHHhhCC--CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCC---CCCCHHHHHHHHHHcCC
Q 017338          246 WTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ---TLLPADELKKRFEQEGI  320 (373)
Q Consensus       246 is~~el~~~~~~~--~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~---~~~~~~~l~~~~~~~gi  320 (373)
                      ||++|+.+++.++  +++|||+|++.||           ..||||||+|+|+..+.....   .+...+++.+       
T Consensus         1 is~~~l~~~l~~~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~-------   62 (105)
T cd01525           1 ISVYDVIRLLDNSPAKLAAVDIRSSPDF-----------RRGHIEGSINIPFSSVFLKEGELEQLPTVPRLEN-------   62 (105)
T ss_pred             CCHHHHHHHHhCCCCCeEEEECCCHHHH-----------hCCccCCCEeCCHHHhcccccccccccchHHHHh-------
Confidence            5778999988753  6899999999999           789999999999987653221   1222222221       


Q ss_pred             CCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHh
Q 017338          321 SLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWG  362 (373)
Q Consensus       321 ~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~  362 (373)
                      ..+++||+||.+|.+|..+++.|+.+||++|++|+||+.+|+
T Consensus        63 ~~~~~vv~~c~~g~~s~~~a~~L~~~G~~~v~~l~GG~~a~~  104 (105)
T cd01525          63 YKGKIIVIVSHSHKHAALFAAFLVKCGVPRVCILDGGINALK  104 (105)
T ss_pred             hcCCeEEEEeCCCccHHHHHHHHHHcCCCCEEEEeCcHHHhc
Confidence            247899999999999999999999999999999999999995

Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD.

>cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3

Probab=99.79  E-value=3.1e-19  Score=141.21  Aligned_cols=93  Identities=26%  Similarity=0.307  Sum_probs=76.2

Q ss_pred             cCHHHHHHHhhCC--CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCC
Q 017338          246 WTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (373)
Q Consensus       246 is~~el~~~~~~~--~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~  323 (373)
                      |+++|+.+.+.++  +++|||+|++.||           ..||||||+|+|+.++....             ......++
T Consensus         1 is~~~l~~~~~~~~~~~~liDvR~~~e~-----------~~ghipga~~ip~~~l~~~~-------------~~~~~~~~   56 (95)
T cd01534           1 IGAAELARWAAEGDRTVYRFDVRTPEEY-----------EAGHLPGFRHTPGGQLVQET-------------DHFAPVRG   56 (95)
T ss_pred             CCHHHHHHHHHcCCCCeEEEECCCHHHH-----------HhCCCCCcEeCCHHHHHHHH-------------HHhcccCC
Confidence            4678888888754  5789999999999           78999999999987654321             11112257


Q ss_pred             CcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhc
Q 017338          324 KPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA  363 (373)
Q Consensus       324 ~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~  363 (373)
                      ++||+||.+|.||..++..|+.+||+ |++|+||+.+|.+
T Consensus        57 ~~iv~~c~~G~rs~~aa~~L~~~G~~-v~~l~GG~~~W~~   95 (95)
T cd01534          57 ARIVLADDDGVRADMTASWLAQMGWE-VYVLEGGLAAALA   95 (95)
T ss_pred             CeEEEECCCCChHHHHHHHHHHcCCE-EEEecCcHHHhcC
Confidence            89999999999999999999999998 9999999999963

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative catalytic Cys residue.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=99.79  E-value=1.6e-18  Score=170.36  Aligned_cols=104  Identities=18%  Similarity=0.221  Sum_probs=88.8

Q ss_pred             CcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 017338           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (373)
Q Consensus        76 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~  155 (373)
                      ..|++++|.+++++ +.+|||+|         +.++|..||||||+|+|+..+                 .+.+..+.++
T Consensus         3 ~~is~~el~~~l~~-~~~ivDvR---------~~~e~~~ghIpgAi~ip~~~l-----------------~~~~~~~~~~   55 (376)
T PRK08762          3 REISPAEARARAAQ-GAVLIDVR---------EAHERASGQAEGALRIPRGFL-----------------ELRIETHLPD   55 (376)
T ss_pred             ceeCHHHHHHHHhC-CCEEEECC---------CHHHHhCCcCCCCEECCHHHH-----------------HHHHhhhcCC
Confidence            45899999999876 58999996         458999999999999998653                 3345555667


Q ss_pred             CCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCC
Q 017338          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (373)
Q Consensus       156 ~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~  207 (373)
                      ++++||+||..|.+ +.++++.|+.+||++|++|+||+.+|+++|+|++...
T Consensus        56 ~~~~IvvyC~~G~r-s~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  106 (376)
T PRK08762         56 RDREIVLICASGTR-SAHAAATLRELGYTRVASVAGGFSAWKDAGLPLERPR  106 (376)
T ss_pred             CCCeEEEEcCCCcH-HHHHHHHHHHcCCCceEeecCcHHHHHhcCCcccccc
Confidence            89999999997764 8899999999999999999999999999999988653

>cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain

Probab=99.79  E-value=1e-19  Score=145.68  Aligned_cols=102  Identities=21%  Similarity=0.394  Sum_probs=81.3

Q ss_pred             cCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCc
Q 017338          246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKP  325 (373)
Q Consensus       246 is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~  325 (373)
                      |+++++.+.+.+++.+|||+|++.+|.          ..||||||+|+|+..+......    +   ..+...+++++++
T Consensus         1 is~~el~~~~~~~~~~iiDvR~~~~~~----------~~ghIpga~~ip~~~~~~~~~~----~---~~~~~~~~~~~~~   63 (103)
T cd01447           1 LSPEDARALLGSPGVLLVDVRDPRELE----------RTGMIPGAFHAPRGMLEFWADP----D---SPYHKPAFAEDKP   63 (103)
T ss_pred             CCHHHHHHHHhCCCeEEEECCCHHHHH----------hcCCCCCcEEcccchhhhhcCc----c---ccccccCCCCCCe
Confidence            467888888877778999999998872          4799999999998665321100    0   0111225789999


Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcC
Q 017338          326 VVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       326 IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~  364 (373)
                      ||+||.+|.+|..+++.|+.+||++|++|+||+.+|...
T Consensus        64 ivv~c~~g~~s~~~~~~l~~~G~~~v~~l~Gg~~~w~~~  102 (103)
T cd01447          64 FVFYCASGWRSALAGKTLQDMGLKPVYNIEGGFKDWKEA  102 (103)
T ss_pred             EEEEcCCCCcHHHHHHHHHHcChHHhEeecCcHHHHhhc
Confidence            999999999999999999999999999999999999765

This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins.

>PRK11784 tRNA 2-selenouridine synthase; Provisional

Probab=99.78  E-value=2.6e-18  Score=165.68  Aligned_cols=168  Identities=20%  Similarity=0.218  Sum_probs=113.4

Q ss_pred             cHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccC---------C-----CCCCCCCCHHH
Q 017338           79 SVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT---------T-----NLPHMLPSEEA  144 (373)
Q Consensus        79 s~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~---------~-----~~~~~l~~~e~  144 (373)
                      ...++.+.+.+ +.+|||||        +| .||..||||||+|+|+....+..         +     ..++.+++++.
T Consensus         4 ~~~~~~~~~~~-~~~lIDVR--------sp-~Ef~~ghIpgAiniPl~~~~er~~vgt~Ykq~g~~~a~~lg~~lv~~~l   73 (345)
T PRK11784          4 DAQDFRALFLN-DTPLIDVR--------SP-IEFAEGHIPGAINLPLLNDEERAEVGTCYKQQGQFAAIALGHALVAGNI   73 (345)
T ss_pred             cHHHHHHHHhC-CCEEEECC--------CH-HHHhcCCCCCeeeCCCCChhHHHhhchhhcccCHHHHHHhhhhhcchhH
Confidence            35566666543 78999996        44 89999999999999996432110         0     13345555332


Q ss_pred             HHHHHHHcCC--CCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHH
Q 017338          145 FAAAVSALGL--ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAI  222 (373)
Q Consensus       145 ~~~~l~~~gi--~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~  222 (373)
                      ...+...++.  +++++||+||..|+.+|.+++|.|+.+|| +|++|+||+.+|++.+.+.....+              
T Consensus        74 ~~~~~~~~~~~~~~~~~ivvyC~rgG~RS~~aa~~L~~~G~-~v~~L~GG~~awr~~~~~~~~~~~--------------  138 (345)
T PRK11784         74 AAHREEAWADFPRANPRGLLYCWRGGLRSGSVQQWLKEAGI-DVPRLEGGYKAYRRFVIDTLEEAP--------------  138 (345)
T ss_pred             HHHHHHHHHhcccCCCeEEEEECCCChHHHHHHHHHHHcCC-CcEEEcCCHHHHHHhhHHHHhhhc--------------
Confidence            2222211121  47889999997565669999999999999 699999999999988775544321              


Q ss_pred             HHhhcCcccCCcceeeccCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCC
Q 017338          223 EKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPG  289 (373)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpG  289 (373)
                               .+..|.. +....-....++...+.+.+.++||.|+..+|.|.        ..|+|++
T Consensus       139 ---------~~~~~iv-l~G~TGsGKT~iL~~L~~~~~~vlDlE~~aehrGS--------~fG~~~~  187 (345)
T PRK11784        139 ---------AQFPLVV-LGGNTGSGKTELLQALANAGAQVLDLEGLANHRGS--------SFGRLGG  187 (345)
T ss_pred             ---------ccCceEe-cCCCCcccHHHHHHHHHhcCCeEEECCchhhhccc--------cccCCCC
Confidence                     0111211 22223456678888888778899999999999764        4666665

>PF00581 Rhodanese: Rhodanese-like domain This Prosite entry represents a subset of this family

Probab=99.78  E-value=2e-19  Score=145.83  Aligned_cols=105  Identities=31%  Similarity=0.603  Sum_probs=85.6

Q ss_pred             CHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHc--CCCCCC
Q 017338          247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQE--GISLEK  324 (373)
Q Consensus       247 s~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~--gi~~~~  324 (373)
                      |++|+++++++++++|||+|++.+|           ..||||||+|+|+..+ .........+.+...+...  ++++++
T Consensus         1 s~~el~~~l~~~~~~liD~R~~~~~-----------~~~hI~ga~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (113)
T PF00581_consen    1 SPEELKEMLENESVLLIDVRSPEEY-----------ERGHIPGAVNIPFPSL-DPDEPSLSEDKLDEFLKELGKKIDKDK   68 (113)
T ss_dssp             -HHHHHHHHTTTTEEEEEESSHHHH-----------HHSBETTEEEEEGGGG-SSSSSBCHHHHHHHHHHHHTHGSTTTS
T ss_pred             CHHHHHhhhhCCCeEEEEeCCHHHH-----------HcCCCCCCcccccccc-ccccccccccccccccccccccccccc
Confidence            5789999997778999999999999           8999999999999877 3333344555555555443  468889


Q ss_pred             cEEEEcCCchHHHHHHHH-----HHHcCCCCceeecccHHHHhc
Q 017338          325 PVVTACGTGVTACILALG-----LNRLGKHDVAVYDGSWTEWGA  363 (373)
Q Consensus       325 ~IvvyC~~G~ra~~a~~~-----L~~~G~~~v~~~~GG~~~W~~  363 (373)
                      +||+||.+|.++..++..     |+.+||++|++|+|||.+|.+
T Consensus        69 ~iv~yc~~~~~~~~~~~~~~~~~l~~~g~~~v~~l~GG~~~w~~  112 (113)
T PF00581_consen   69 DIVFYCSSGWRSGSAAAARVAWILKKLGFKNVYILDGGFEAWKA  112 (113)
T ss_dssp             EEEEEESSSCHHHHHHHHHHHHHHHHTTTSSEEEETTHHHHHHH
T ss_pred             cceeeeecccccchhHHHHHHHHHHHcCCCCEEEecChHHHHhc
Confidence            999999998888776665     888999999999999999975

; InterPro: IPR001763 Rhodanese, a sulphurtransferase involved in cyanide detoxification (see IPR001307 from INTERPRO) shares evolutionary relationship with a large family of proteins [], including Cdc25 phosphatase catalytic domain. non-catalytic domains of eukaryotic dual-specificity MAPK-phosphatases. non-catalytic domains of yeast PTP-type MAPK-phosphatases. non-catalytic domains of yeast Ubp4, Ubp5, Ubp7. non-catalytic domains of mammalian Ubp-Y. Drosophila heat shock protein HSP-67BB. several bacterial cold-shock and phage shock proteins. plant senescence associated proteins. catalytic and non-catalytic domains of rhodanese (see IPR001307 from INTERPRO). Rhodanese has an internal duplication. This domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases [].; PDB: 2J6P_D 2FSX_A 1UAR_A 1OKG_A 1GMX_A 1GN0_A 3NTD_B 3NTA_B 3NT6_A 1C25_A ....

>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily

Probab=99.78  E-value=6.6e-19  Score=140.56  Aligned_cols=98  Identities=14%  Similarity=0.236  Sum_probs=79.5

Q ss_pred             cCHHHHHHHhhC-CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCC
Q 017338          246 WTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (373)
Q Consensus       246 is~~el~~~~~~-~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~  324 (373)
                      ++++++.+.+++ .+.+|||+|++.||           ..||||||+|+|+..+....  +   +...+.+.  .+++++
T Consensus         1 is~~el~~~l~~~~~~~liDvR~~~e~-----------~~ghi~ga~~ip~~~~~~~~--~---~~~~~~~~--~~~~~~   62 (100)
T cd01523           1 LDPEDLYARLLAGQPLFILDVRNESDY-----------ERWKIDGENNTPYFDPYFDF--L---EIEEDILD--QLPDDQ   62 (100)
T ss_pred             CCHHHHHHHHHcCCCcEEEEeCCHHHH-----------hhcccCCCcccccccchHHH--H---HhhHHHHh--hCCCCC
Confidence            467888888876 35899999999999           78999999999998764320  0   01122233  367899


Q ss_pred             cEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHh
Q 017338          325 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWG  362 (373)
Q Consensus       325 ~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~  362 (373)
                      +||+||.+|.||..++..|+.+||+ ++.+.||+.+|.
T Consensus        63 ~ivv~C~~G~rs~~aa~~L~~~G~~-~~~l~GG~~~W~   99 (100)
T cd01523          63 EVTVICAKEGSSQFVAELLAERGYD-VDYLAGGMKAWS   99 (100)
T ss_pred             eEEEEcCCCCcHHHHHHHHHHcCce-eEEeCCcHHhhc
Confidence            9999999999999999999999998 999999999996

This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.

>PRK00162 glpE thiosulfate sulfurtransferase; Validated

Probab=99.78  E-value=1.5e-18  Score=140.60  Aligned_cols=103  Identities=22%  Similarity=0.305  Sum_probs=87.2

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 017338           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi  154 (373)
                      .+.+++++|.+++++++.+|||+|         +..+|..||||||+|+|+..                 |...+..+  
T Consensus         4 ~~~is~~el~~~l~~~~~~ivDvR---------~~~e~~~ghi~gA~~ip~~~-----------------l~~~~~~~--   55 (108)
T PRK00162          4 FECINVEQAHQKLQEGGAVLVDIR---------DPQSFAMGHAPGAFHLTNDS-----------------LGAFMRQA--   55 (108)
T ss_pred             ccccCHHHHHHHHHcCCCEEEEcC---------CHHHHhcCCCCCCeECCHHH-----------------HHHHHHhc--
Confidence            456999999999977678999996         45899999999999999754                 44455554  


Q ss_pred             CCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccC
Q 017338          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESS  206 (373)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~  206 (373)
                      ++++++|+||..|.+ +..++..|+..||++|++|+||+.+|++.++|++.+
T Consensus        56 ~~~~~ivv~c~~g~~-s~~a~~~L~~~G~~~v~~l~GG~~~w~~~~~~~~~~  106 (108)
T PRK00162         56 DFDTPVMVMCYHGNS-SQGAAQYLLQQGFDVVYSIDGGFEAWRRTFPAEVAS  106 (108)
T ss_pred             CCCCCEEEEeCCCCC-HHHHHHHHHHCCchheEEecCCHHHHHhcCCCccCC
Confidence            567889999997765 788888999999999999999999999999998764

>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2

Probab=99.78  E-value=7.6e-19  Score=140.51  Aligned_cols=96  Identities=19%  Similarity=0.345  Sum_probs=79.7

Q ss_pred             cCHHHHHHHhhCC--CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCC
Q 017338          246 WTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (373)
Q Consensus       246 is~~el~~~~~~~--~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~  323 (373)
                      |+++++.+.+..+  +.+|||+|++.||           ..+|||||+|+|+.++.+.          .+.+..  .+++
T Consensus         2 i~~~~l~~~~~~~~~~~~iiDvR~~~e~-----------~~~hI~ga~~ip~~~~~~~----------~~~~~~--~~~~   58 (101)
T cd01528           2 ISVAELAEWLADEREEPVLIDVREPEEL-----------EIAFLPGFLHLPMSEIPER----------SKELDS--DNPD   58 (101)
T ss_pred             CCHHHHHHHHhcCCCCCEEEECCCHHHH-----------hcCcCCCCEecCHHHHHHH----------HHHhcc--cCCC
Confidence            5678898888764  5789999999999           7899999999998765321          111221  2568


Q ss_pred             CcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcC
Q 017338          324 KPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       324 ~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~  364 (373)
                      ++||+||++|.+|..+++.|..+||++|++|+||+.+|...
T Consensus        59 ~~vv~~c~~g~rs~~~~~~l~~~G~~~v~~l~GG~~~w~~~   99 (101)
T cd01528          59 KDIVVLCHHGGRSMQVAQWLLRQGFENVYNLQGGIDAWSLE   99 (101)
T ss_pred             CeEEEEeCCCchHHHHHHHHHHcCCccEEEecCCHHHHhhh
Confidence            99999999999999999999999999999999999999764

Subgroup 2 includes uncharacterized putative rhodanese-related domains.

>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1

Probab=99.78  E-value=5e-19  Score=145.56  Aligned_cols=105  Identities=17%  Similarity=0.225  Sum_probs=85.6

Q ss_pred             cCHHHHHHHhhC-CCcEEEEecCCCccCCCCCCCCCCCC-cccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCC
Q 017338          246 WTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIR-SGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (373)
Q Consensus       246 is~~el~~~~~~-~~~~iIDvR~~~e~~G~~~~~~~~~~-~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~  323 (373)
                      +|++++.+++++ ++.+|||+|++.||           . .||||||+|+|+.++.....   . ..+...+... ++++
T Consensus         1 is~~el~~~l~~~~~~~vIDvR~~~e~-----------~~~ghIpgA~~ip~~~~~~~~~---~-~~~~~~l~~~-~~~~   64 (117)
T cd01522           1 LTPAEAWALLQADPQAVLVDVRTEAEW-----------KFVGGVPDAVHVAWQVYPDMEI---N-PNFLAELEEK-VGKD   64 (117)
T ss_pred             CCHHHHHHHHHhCCCeEEEECCCHHHH-----------hcccCCCCceecchhhcccccc---C-HHHHHHHHhh-CCCC
Confidence            467888888877 57899999999999           7 89999999999988764211   1 2333333333 3788


Q ss_pred             CcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCC
Q 017338          324 KPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPD  366 (373)
Q Consensus       324 ~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g  366 (373)
                      ++||+||.+|.+|..++..|+.+||++|+.|.||+.+|....|
T Consensus        65 ~~ivv~C~~G~rs~~aa~~L~~~G~~~v~~l~gG~~~~~~~~~  107 (117)
T cd01522          65 RPVLLLCRSGNRSIAAAEAAAQAGFTNVYNVLEGFEGDLDAAG  107 (117)
T ss_pred             CeEEEEcCCCccHHHHHHHHHHCCCCeEEECcCceecCCCCCC
Confidence            9999999999999999999999999999999999999977644

This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.

>cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3

Probab=99.78  E-value=8e-19  Score=138.81  Aligned_cols=93  Identities=22%  Similarity=0.272  Sum_probs=74.3

Q ss_pred             ccHHHHHHhcCCC--CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 017338           78 VSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (373)
Q Consensus        78 is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~  155 (373)
                      ||+++|.+++.+.  +++|||||         +.++|..||||||+|+|+..+..                 .+..+...
T Consensus         1 is~~~l~~~~~~~~~~~~liDvR---------~~~e~~~ghipga~~ip~~~l~~-----------------~~~~~~~~   54 (95)
T cd01534           1 IGAAELARWAAEGDRTVYRFDVR---------TPEEYEAGHLPGFRHTPGGQLVQ-----------------ETDHFAPV   54 (95)
T ss_pred             CCHHHHHHHHHcCCCCeEEEECC---------CHHHHHhCCCCCcEeCCHHHHHH-----------------HHHHhccc
Confidence            6889999988764  58899996         45899999999999999876432                 11222223


Q ss_pred             CCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHh
Q 017338          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (373)
Q Consensus       156 ~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~  198 (373)
                      ++++||+||..|.+ +..+++.|+.+||+ |++|+||+.+|.+
T Consensus        55 ~~~~iv~~c~~G~r-s~~aa~~L~~~G~~-v~~l~GG~~~W~~   95 (95)
T cd01534          55 RGARIVLADDDGVR-ADMTASWLAQMGWE-VYVLEGGLAAALA   95 (95)
T ss_pred             CCCeEEEECCCCCh-HHHHHHHHHHcCCE-EEEecCcHHHhcC
Confidence            56889999998876 77788889999998 9999999999964

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative catalytic Cys residue.

>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily

Probab=99.77  E-value=1.5e-18  Score=141.07  Aligned_cols=101  Identities=22%  Similarity=0.325  Sum_probs=83.5

Q ss_pred             CCcccHHHHHHhcCCC--CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHc
Q 017338           75 EPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~  152 (373)
                      ...|++++|.+++.+.  +++|||+|         +..+|..||||||+|+|...+..                ..  ..
T Consensus         7 ~~~~s~~el~~~l~~~~~~~~iiDvR---------~~~e~~~ghIpgA~~ip~~~l~~----------------~~--~~   59 (110)
T cd01521           7 AFETDCWDVAIALKNGKPDFVLVDVR---------SAEAYARGHVPGAINLPHREICE----------------NA--TA   59 (110)
T ss_pred             eeecCHHHHHHHHHcCCCCEEEEECC---------CHHHHhcCCCCCCEeCCHHHhhh----------------Hh--hh
Confidence            3569999999998763  58999996         44899999999999999876431                01  12


Q ss_pred             CCCCCCeEEEEcCCCC-chHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCc
Q 017338          153 GLENKDGLVVYDGKGI-FSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  203 (373)
Q Consensus       153 gi~~~~~VVvy~~~g~-~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv  203 (373)
                      +++++++||+||..|. ..+.++++.|+.+||+ +++|+||+.+|+.+|+|+
T Consensus        60 ~i~~~~~vvvyc~~g~~~~s~~~a~~l~~~G~~-v~~l~GG~~~W~~~g~~~  110 (110)
T cd01521          60 KLDKEKLFVVYCDGPGCNGATKAALKLAELGFP-VKEMIGGLDWWKREGYAT  110 (110)
T ss_pred             cCCCCCeEEEEECCCCCchHHHHHHHHHHcCCe-EEEecCCHHHHHHCCCCC
Confidence            5678999999998764 4589999999999994 999999999999999875

This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.

>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily

Probab=99.77  E-value=6.2e-19  Score=143.37  Aligned_cols=99  Identities=25%  Similarity=0.328  Sum_probs=83.6

Q ss_pred             cccCHHHHHHHhhC--CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCC
Q 017338          244 LIWTLEQVKRNIEE--GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  321 (373)
Q Consensus       244 ~~is~~el~~~~~~--~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~  321 (373)
                      ..++++++.+.+..  ++.+|||+|++.+|           ..||||||+|+|+..+...            .+  .+++
T Consensus         8 ~~~s~~el~~~l~~~~~~~~iiDvR~~~e~-----------~~ghIpgA~~ip~~~l~~~------------~~--~~i~   62 (110)
T cd01521           8 FETDCWDVAIALKNGKPDFVLVDVRSAEAY-----------ARGHVPGAINLPHREICEN------------AT--AKLD   62 (110)
T ss_pred             eecCHHHHHHHHHcCCCCEEEEECCCHHHH-----------hcCCCCCCEeCCHHHhhhH------------hh--hcCC
Confidence            35788999998875  35899999999999           7899999999998775321            11  2578


Q ss_pred             CCCcEEEEcCCc--hHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCC
Q 017338          322 LEKPVVTACGTG--VTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPV  369 (373)
Q Consensus       322 ~~~~IvvyC~~G--~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv  369 (373)
                      ++++||+||.+|  .+|..+++.|+.+||+ +++|+||+.+|... |+|+
T Consensus        63 ~~~~vvvyc~~g~~~~s~~~a~~l~~~G~~-v~~l~GG~~~W~~~-g~~~  110 (110)
T cd01521          63 KEKLFVVYCDGPGCNGATKAALKLAELGFP-VKEMIGGLDWWKRE-GYAT  110 (110)
T ss_pred             CCCeEEEEECCCCCchHHHHHHHHHHcCCe-EEEecCCHHHHHHC-CCCC
Confidence            999999999987  4899999999999995 99999999999998 8885

This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.

>cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain

Probab=99.77  E-value=1.3e-18  Score=139.30  Aligned_cols=102  Identities=20%  Similarity=0.292  Sum_probs=79.2

Q ss_pred             ccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhh-hhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCC
Q 017338           78 VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEY-QVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  156 (373)
Q Consensus        78 is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey-~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~  156 (373)
                      |++++|.+++.+++.+|||+|        + ..+| ..||||||+|+|+..+.......           ..+...++++
T Consensus         1 is~~el~~~~~~~~~~iiDvR--------~-~~~~~~~ghIpga~~ip~~~~~~~~~~~-----------~~~~~~~~~~   60 (103)
T cd01447           1 LSPEDARALLGSPGVLLVDVR--------D-PRELERTGMIPGAFHAPRGMLEFWADPD-----------SPYHKPAFAE   60 (103)
T ss_pred             CCHHHHHHHHhCCCeEEEECC--------C-HHHHHhcCCCCCcEEcccchhhhhcCcc-----------ccccccCCCC
Confidence            688999999887789999996        3 3666 67999999999986653210000           0111235778


Q ss_pred             CCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCC
Q 017338          157 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  200 (373)
Q Consensus       157 ~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g  200 (373)
                      +++||+||..|.+ +.+++++|+.+||++|++|+||+.+|..+|
T Consensus        61 ~~~ivv~c~~g~~-s~~~~~~l~~~G~~~v~~l~Gg~~~w~~~g  103 (103)
T cd01447          61 DKPFVFYCASGWR-SALAGKTLQDMGLKPVYNIEGGFKDWKEAG  103 (103)
T ss_pred             CCeEEEEcCCCCc-HHHHHHHHHHcChHHhEeecCcHHHHhhcC
Confidence            9999999987765 889999999999999999999999998664

This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins.

>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily

Probab=99.77  E-value=5.1e-19  Score=139.84  Aligned_cols=91  Identities=22%  Similarity=0.429  Sum_probs=79.0

Q ss_pred             cCHHHHHHHhhC-CCcEEEEecCCCccCCCCCCCCCCCCc--ccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCC
Q 017338          246 WTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRS--GHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  322 (373)
Q Consensus       246 is~~el~~~~~~-~~~~iIDvR~~~e~~G~~~~~~~~~~~--GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~  322 (373)
                      ++++++.+.+.+ .+.+|||+|++.+|           ..  ||||||+|+|+.++.             +.+.  .+++
T Consensus         2 i~~~~~~~~~~~~~~~~ivDvR~~~e~-----------~~~~~hi~ga~~ip~~~~~-------------~~~~--~~~~   55 (96)
T cd01444           2 ISVDELAELLAAGEAPVLLDVRDPASY-----------AALPDHIPGAIHLDEDSLD-------------DWLG--DLDR   55 (96)
T ss_pred             cCHHHHHHHHhcCCCcEEEECCCHHHH-----------hcccCCCCCCeeCCHHHHH-------------HHHh--hcCC
Confidence            567888888776 46899999999999           66  999999999997543             2233  3678


Q ss_pred             CCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHh
Q 017338          323 EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWG  362 (373)
Q Consensus       323 ~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~  362 (373)
                      +++||+||.+|.+|..++..|+.+||++|++++||+.+|.
T Consensus        56 ~~~ivv~c~~g~~s~~a~~~l~~~G~~~v~~l~gG~~~w~   95 (96)
T cd01444          56 DRPVVVYCYHGNSSAQLAQALREAGFTDVRSLAGGFEAWR   95 (96)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHcCCceEEEcCCCHHHhc
Confidence            9999999999999999999999999999999999999996

Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.

>smart00450 RHOD Rhodanese Homology Domain

Probab=99.77  E-value=2.7e-18  Score=135.37  Aligned_cols=99  Identities=32%  Similarity=0.613  Sum_probs=81.8

Q ss_pred             CCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEEcCCCC
Q 017338           89 EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGI  168 (373)
Q Consensus        89 ~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~~~~VVvy~~~g~  168 (373)
                      +++++|||+|         +..+|..||||||+|+|+..+........     ...+.+.+...++.++++||+||..+.
T Consensus         2 ~~~~~ivDvR---------~~~e~~~~hi~ga~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~iv~~c~~g~   67 (100)
T smart00450        2 DEKVVLLDVR---------SPEEYEGGHIPGAVNIPLSELLDRRGELD-----ILEFEELLKRLGLDKDKPVVVYCRSGN   67 (100)
T ss_pred             CCCEEEEECC---------CHHHhccCCCCCceeCCHHHhccCCCCcC-----HHHHHHHHHHcCCCCCCeEEEEeCCCc
Confidence            3578999997         45899999999999999987654322211     126777888889999999999997655


Q ss_pred             chHHHHHHHHHHcCCCceEEecCCHHHHHhCCCC
Q 017338          169 FSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD  202 (373)
Q Consensus       169 ~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~p  202 (373)
                       .+.++++.|+.+|+++|++|+||+.+|..++.|
T Consensus        68 -~a~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~~  100 (100)
T smart00450       68 -RSAKAAWLLRELGFKNVYLLDGGYKEWSAAGPP  100 (100)
T ss_pred             -HHHHHHHHHHHcCCCceEEecCCHHHHHhcCCC
Confidence             589999999999999999999999999988764

An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.

>PLN02160 thiosulfate sulfurtransferase

Probab=99.76  E-value=5.6e-18  Score=142.89  Aligned_cols=115  Identities=17%  Similarity=0.174  Sum_probs=89.9

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCc--eecCcccccccCCCCCCCCCCHHHHHHHHHHc
Q 017338           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGA--LFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGA--i~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~  152 (373)
                      ...|+++++.+++++ +.+|||||         +..+|..||||||  +|+|+..+...     ..+.+.+.... +.. 
T Consensus        14 ~~~i~~~e~~~~~~~-~~~lIDVR---------~~~E~~~ghIpgA~~iniP~~~~~~~-----~~l~~~~~~~~-~~~-   76 (136)
T PLN02160         14 VVSVDVSQAKTLLQS-GHQYLDVR---------TQDEFRRGHCEAAKIVNIPYMLNTPQ-----GRVKNQEFLEQ-VSS-   76 (136)
T ss_pred             eeEeCHHHHHHHHhC-CCEEEECC---------CHHHHhcCCCCCcceecccchhcCcc-----cccCCHHHHHH-HHh-
Confidence            456999999998876 46899996         4589999999999  89998544210     12223332232 222 


Q ss_pred             CCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCC
Q 017338          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (373)
Q Consensus       153 gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~  207 (373)
                      .++++++||+||..|.+ |..++..|...||++|++|+||+.+|.++|+|+.+..
T Consensus        77 ~~~~~~~IivyC~sG~R-S~~Aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  130 (136)
T PLN02160         77 LLNPADDILVGCQSGAR-SLKATTELVAAGYKKVRNKGGGYLAWVDHSFPINQEE  130 (136)
T ss_pred             ccCCCCcEEEECCCcHH-HHHHHHHHHHcCCCCeeecCCcHHHHhhCCCCccccc
Confidence            24678899999998775 8999999999999999999999999999999999865

>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily

Probab=99.76  E-value=2.4e-18  Score=134.71  Aligned_cols=88  Identities=23%  Similarity=0.462  Sum_probs=75.8

Q ss_pred             CHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCcE
Q 017338          247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPV  326 (373)
Q Consensus       247 s~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~I  326 (373)
                      +++|+.+++ .++.++||+|++++|           ..||||||+|+|+.++.             +.+.  .++++++|
T Consensus         2 ~~~e~~~~~-~~~~~iiD~R~~~~~-----------~~~hipgA~~ip~~~~~-------------~~~~--~~~~~~~v   54 (90)
T cd01524           2 QWHELDNYR-ADGVTLIDVRTPQEF-----------EKGHIKGAINIPLDELR-------------DRLN--ELPKDKEI   54 (90)
T ss_pred             CHHHHHHHh-cCCCEEEECCCHHHH-----------hcCCCCCCEeCCHHHHH-------------HHHH--hcCCCCcE
Confidence            467888887 457889999999999           78999999999986542             2233  36788999


Q ss_pred             EEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHh
Q 017338          327 VTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWG  362 (373)
Q Consensus       327 vvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~  362 (373)
                      |+||.+|.++..++..|+.+|| +|++|+||+.+|.
T Consensus        55 vl~c~~g~~a~~~a~~L~~~G~-~v~~l~GG~~~w~   89 (90)
T cd01524          55 IVYCAVGLRGYIAARILTQNGF-KVKNLDGGYKTYS   89 (90)
T ss_pred             EEEcCCChhHHHHHHHHHHCCC-CEEEecCCHHHhc
Confidence            9999999999999999999999 8999999999996

Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.

>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2

Probab=99.75  E-value=3.6e-18  Score=136.61  Aligned_cols=94  Identities=22%  Similarity=0.353  Sum_probs=77.7

Q ss_pred             ccHHHHHHhcCCC--CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC-
Q 017338           78 VSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL-  154 (373)
Q Consensus        78 is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi-  154 (373)
                      |++++|.+++..+  +++|||+|         +.++|..+|||||+|+|+..+.+                 .+..+.. 
T Consensus         2 i~~~~l~~~~~~~~~~~~iiDvR---------~~~e~~~~hI~ga~~ip~~~~~~-----------------~~~~~~~~   55 (101)
T cd01528           2 ISVAELAEWLADEREEPVLIDVR---------EPEELEIAFLPGFLHLPMSEIPE-----------------RSKELDSD   55 (101)
T ss_pred             CCHHHHHHHHhcCCCCCEEEECC---------CHHHHhcCcCCCCEecCHHHHHH-----------------HHHHhccc
Confidence            7899999998865  58999996         45899999999999999876532                 2233322 


Q ss_pred             CCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHh
Q 017338          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (373)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~  198 (373)
                      +++++||+||..|.+ |+++++.|...||++|++|+||+.+|..
T Consensus        56 ~~~~~vv~~c~~g~r-s~~~~~~l~~~G~~~v~~l~GG~~~w~~   98 (101)
T cd01528          56 NPDKDIVVLCHHGGR-SMQVAQWLLRQGFENVYNLQGGIDAWSL   98 (101)
T ss_pred             CCCCeEEEEeCCCch-HHHHHHHHHHcCCccEEEecCCHHHHhh
Confidence            568899999998765 8888999999999999999999999975

Subgroup 2 includes uncharacterized putative rhodanese-related domains.

>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily

Probab=99.75  E-value=2.5e-18  Score=136.21  Aligned_cols=87  Identities=30%  Similarity=0.479  Sum_probs=73.2

Q ss_pred             CCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCcEEEEcCCchHH
Q 017338          257 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTA  336 (373)
Q Consensus       257 ~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~IvvyC~~G~ra  336 (373)
                      +++.+|||+|++.+|           ..||||||+|+|+.++..      ..++++. +.  .++++++||+||.+|.+|
T Consensus        10 ~~~~~iiDvR~~~~~-----------~~~hIpgA~~ip~~~~~~------~~~~~~~-~~--~~~~~~~ivv~c~~g~~s   69 (96)
T cd01529          10 EPGTALLDVRAEDEY-----------AAGHLPGKRSIPGAALVL------RSQELQA-LE--APGRATRYVLTCDGSLLA   69 (96)
T ss_pred             CCCeEEEeCCCHHHH-----------cCCCCCCcEeCCHHHhcC------CHHHHHH-hh--cCCCCCCEEEEeCChHHH
Confidence            456899999999999           789999999999876532      2344443 44  257899999999999999


Q ss_pred             HHHHHHHHHcCCCCceeecccHHHHhc
Q 017338          337 CILALGLNRLGKHDVAVYDGSWTEWGA  363 (373)
Q Consensus       337 ~~a~~~L~~~G~~~v~~~~GG~~~W~~  363 (373)
                      ..+++.|+.+||++|++|+||+.+|.+
T Consensus        70 ~~~~~~l~~~G~~~v~~l~GG~~~W~~   96 (96)
T cd01529          70 RFAAQELLALGGKPVALLDGGTSAWVA   96 (96)
T ss_pred             HHHHHHHHHcCCCCEEEeCCCHHHhcC
Confidence            999999999999999999999999964

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.

>PF00581 Rhodanese: Rhodanese-like domain This Prosite entry represents a subset of this family

Probab=99.75  E-value=4.9e-18  Score=137.61  Aligned_cols=106  Identities=26%  Similarity=0.524  Sum_probs=80.7

Q ss_pred             cHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC--CCC
Q 017338           79 SVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG--LEN  156 (373)
Q Consensus        79 s~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g--i~~  156 (373)
                      ||+||++++++++++|||+|         +..+|..||||||+|+|+..+.     ........+.+...+...+  +++
T Consensus         1 s~~el~~~l~~~~~~liD~R---------~~~~~~~~hI~ga~~i~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~   66 (113)
T PF00581_consen    1 SPEELKEMLENESVLLIDVR---------SPEEYERGHIPGAVNIPFPSLD-----PDEPSLSEDKLDEFLKELGKKIDK   66 (113)
T ss_dssp             -HHHHHHHHTTTTEEEEEES---------SHHHHHHSBETTEEEEEGGGGS-----SSSSBCHHHHHHHHHHHHTHGSTT
T ss_pred             CHHHHHhhhhCCCeEEEEeC---------CHHHHHcCCCCCCccccccccc-----cccccccccccccccccccccccc
Confidence            68999999977789999997         6689999999999999997651     1223344455555445444  478


Q ss_pred             CCeEEEEcCCCCchHHH-----HHHHHHHcCCCceEEecCCHHHHHhC
Q 017338          157 KDGLVVYDGKGIFSAAR-----VWWMFRVFGHDRVWVLDGGLPRWRAS  199 (373)
Q Consensus       157 ~~~VVvy~~~g~~~a~r-----a~~~L~~~G~~~v~~L~GG~~~W~~~  199 (373)
                      ++.||+||..+.. +..     .+|+|..+||++|++|+||+.+|.++
T Consensus        67 ~~~iv~yc~~~~~-~~~~~~~~~~~~l~~~g~~~v~~l~GG~~~w~~~  113 (113)
T PF00581_consen   67 DKDIVFYCSSGWR-SGSAAAARVAWILKKLGFKNVYILDGGFEAWKAE  113 (113)
T ss_dssp             TSEEEEEESSSCH-HHHHHHHHHHHHHHHTTTSSEEEETTHHHHHHHH
T ss_pred             cccceeeeecccc-cchhHHHHHHHHHHHcCCCCEEEecChHHHHhcC
Confidence            8899999965543 333     34459999999999999999999863

; InterPro: IPR001763 Rhodanese, a sulphurtransferase involved in cyanide detoxification (see IPR001307 from INTERPRO) shares evolutionary relationship with a large family of proteins [], including Cdc25 phosphatase catalytic domain. non-catalytic domains of eukaryotic dual-specificity MAPK-phosphatases. non-catalytic domains of yeast PTP-type MAPK-phosphatases. non-catalytic domains of yeast Ubp4, Ubp5, Ubp7. non-catalytic domains of mammalian Ubp-Y. Drosophila heat shock protein HSP-67BB. several bacterial cold-shock and phage shock proteins. plant senescence associated proteins. catalytic and non-catalytic domains of rhodanese (see IPR001307 from INTERPRO). Rhodanese has an internal duplication. This domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases [].; PDB: 2J6P_D 2FSX_A 1UAR_A 1OKG_A 1GMX_A 1GN0_A 3NTD_B 3NTA_B 3NT6_A 1C25_A ....

>cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily

Probab=99.75  E-value=4.9e-18  Score=140.66  Aligned_cols=109  Identities=17%  Similarity=0.229  Sum_probs=86.9

Q ss_pred             CCCcccHHHHHHhcCC-CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHH-HHHH
Q 017338           74 KEPVVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA-AVSA  151 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~-~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~-~l~~  151 (373)
                      ....|++++|.+++.+ .+++|||+|         +..+|..||||||+|+|+..+.+....          +.. .+..
T Consensus         6 ~~~~is~~el~~~~~~~~~~~ivDvR---------~~~e~~~~hIpgai~ip~~~~~~~~~~----------~~~~~~~~   66 (122)
T cd01526           6 PEERVSVKDYKNILQAGKKHVLLDVR---------PKVHFEICRLPEAINIPLSELLSKAAE----------LKSLQELP   66 (122)
T ss_pred             cccccCHHHHHHHHhCCCCeEEEEcC---------CHHHhhcccCCCCeEccHHHHhhhhhh----------hhhhhhcc
Confidence            4557999999999876 578999996         568999999999999999876542111          111 2334


Q ss_pred             cCCCCCCeEEEEcCCCCchHHHHHHHHHHcCC-CceEEecCCHHHHHhCCCC
Q 017338          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGH-DRVWVLDGGLPRWRASGYD  202 (373)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~-~~v~~L~GG~~~W~~~g~p  202 (373)
                      .+++++++||+||..|.+ +..++..|+.+|| ++|++|+||+.+|.++..+
T Consensus        67 ~~~~~~~~ivv~C~~G~r-s~~aa~~L~~~G~~~~v~~l~GG~~~W~~~~~~  117 (122)
T cd01526          67 LDNDKDSPIYVVCRRGND-SQTAVRKLKELGLERFVRDIIGGLKAWADKVDP  117 (122)
T ss_pred             cccCCCCcEEEECCCCCc-HHHHHHHHHHcCCccceeeecchHHHHHHHhCc
Confidence            567889999999998765 8889999999999 6999999999999876543

This CD includes several putative molybdopterin synthase sulfurylases including the molybdenum cofactor biosynthetic protein (CnxF) of Aspergillus nidulans and the molybdenum cofactor synthesis protein 3 (MOCS3) of Homo sapiens. These rhodanese-like domains are found C-terminal of the ThiF and MoeZ_MoeB domains.

>cd01530 Cdc25 Cdc25 phosphatases are members of the Rhodanese Homology Domain superfamily

Probab=99.75  E-value=2.5e-18  Score=142.19  Aligned_cols=98  Identities=13%  Similarity=0.251  Sum_probs=78.7

Q ss_pred             ccCHHHHHHHhhC------CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcc-cccccCCCCCCHHHHHHHHHH
Q 017338          245 IWTLEQVKRNIEE------GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFP-QMLDASQTLLPADELKKRFEQ  317 (373)
Q Consensus       245 ~is~~el~~~~~~------~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~-~l~~~~~~~~~~~~l~~~~~~  317 (373)
                      .|+++++.+.+.+      ++++|||+|++.||           ..||||||+|+|+. .+.+         .+.+...+
T Consensus         3 ~Is~~el~~~l~~~~~~~~~~~~liDvR~~~e~-----------~~ghI~gA~~ip~~~~l~~---------~~~~~~~~   62 (121)
T cd01530           3 RISPETLARLLQGKYDNFFDKYIIIDCRFPYEY-----------NGGHIKGAVNLSTKDELEE---------FFLDKPGV   62 (121)
T ss_pred             ccCHHHHHHHHhcccccCCCCEEEEECCCHHHH-----------hCCcCCCCEeCCcHHHHHH---------HHHHhhcc
Confidence            3688999888865      36899999999999           78999999999985 2321         11111112


Q ss_pred             cCCCCCCcEEEEcC-CchHHHHHHHHHHHc------------CCCCceeecccHHHHh
Q 017338          318 EGISLEKPVVTACG-TGVTACILALGLNRL------------GKHDVAVYDGSWTEWG  362 (373)
Q Consensus       318 ~gi~~~~~IvvyC~-~G~ra~~a~~~L~~~------------G~~~v~~~~GG~~~W~  362 (373)
                      .+++++++||+||. +|.||..+++.|+.+            ||.+|++++||+.+|-
T Consensus        63 ~~~~~~~~vv~yC~~sg~rs~~aa~~L~~~~~~~~~~~~~~~g~~~v~~L~GG~~~f~  120 (121)
T cd01530          63 ASKKKRRVLIFHCEFSSKRGPRMARHLRNLDRELNSNRYPLLYYPEIYILEGGYKNFF  120 (121)
T ss_pred             cccCCCCEEEEECCCccccHHHHHHHHHHHhhhhccccCCCCCCCeEEEEcChhHhhc
Confidence            35789999999997 999999999999884            9999999999999984

They activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. Cdc25A phosphatase functions to regulate S phase entry and Cdc25B is required for G2/M phase transition of the cell cycle. The Cdc25 domain binds oxyanions at the catalytic site and has the signature motif (H/YCxxxxxR).

>cd01530 Cdc25 Cdc25 phosphatases are members of the Rhodanese Homology Domain superfamily

Probab=99.74  E-value=7.1e-18  Score=139.50  Aligned_cols=98  Identities=17%  Similarity=0.233  Sum_probs=77.6

Q ss_pred             cccHHHHHHhcCC------CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcc-cccccCCCCCCCCCCHHHHHHHH
Q 017338           77 VVSVDWLHANLRE------PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVD-GVADRTTNLPHMLPSEEAFAAAV  149 (373)
Q Consensus        77 ~is~~~l~~~l~~------~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~-~l~~~~~~~~~~l~~~e~~~~~l  149 (373)
                      .||++++.+++.+      ++++|||||        + ..+|..||||||+|+|+. .+..             .+....
T Consensus         3 ~Is~~el~~~l~~~~~~~~~~~~liDvR--------~-~~e~~~ghI~gA~~ip~~~~l~~-------------~~~~~~   60 (121)
T cd01530           3 RISPETLARLLQGKYDNFFDKYIIIDCR--------F-PYEYNGGHIKGAVNLSTKDELEE-------------FFLDKP   60 (121)
T ss_pred             ccCHHHHHHHHhcccccCCCCEEEEECC--------C-HHHHhCCcCCCCEeCCcHHHHHH-------------HHHHhh
Confidence            4899999999875      368999996        4 489999999999999986 3321             111111


Q ss_pred             HHcCCCCCCeEEEEcC-CCCchHHHHHHHHHHc------------CCCceEEecCCHHHHH
Q 017338          150 SALGLENKDGLVVYDG-KGIFSAARVWWMFRVF------------GHDRVWVLDGGLPRWR  197 (373)
Q Consensus       150 ~~~gi~~~~~VVvy~~-~g~~~a~ra~~~L~~~------------G~~~v~~L~GG~~~W~  197 (373)
                      ..++++++++||+||. .|. +++++++.|+.+            ||.+|++|+||+.+|.
T Consensus        61 ~~~~~~~~~~vv~yC~~sg~-rs~~aa~~L~~~~~~~~~~~~~~~g~~~v~~L~GG~~~f~  120 (121)
T cd01530          61 GVASKKKRRVLIFHCEFSSK-RGPRMARHLRNLDRELNSNRYPLLYYPEIYILEGGYKNFF  120 (121)
T ss_pred             cccccCCCCEEEEECCCccc-cHHHHHHHHHHHhhhhccccCCCCCCCeEEEEcChhHhhc
Confidence            2346789999999997 555 599999999985            9999999999999984

They activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. Cdc25A phosphatase functions to regulate S phase entry and Cdc25B is required for G2/M phase transition of the cell cycle. The Cdc25 domain binds oxyanions at the catalytic site and has the signature motif (H/YCxxxxxR).

>KOG1530 consensus Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.74  E-value=1.3e-17  Score=134.81  Aligned_cols=115  Identities=19%  Similarity=0.282  Sum_probs=98.0

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      ....++.++++++++.++.++||||        +| +||..||||.+||||+.....     ..+++++ .|.+-++..-
T Consensus        21 ~~~sv~~~qvk~L~~~~~~~llDVR--------ep-eEfk~gh~~~siNiPy~~~~~-----~~~l~~~-eF~kqvg~~k   85 (136)
T KOG1530|consen   21 NPQSVSVEQVKNLLQHPDVVLLDVR--------EP-EEFKQGHIPASINIPYMSRPG-----AGALKNP-EFLKQVGSSK   85 (136)
T ss_pred             CcEEEEHHHHHHHhcCCCEEEEeec--------CH-HHhhccCCcceEecccccccc-----ccccCCH-HHHHHhcccC
Confidence            4457999999999999889999995        55 999999999999999975433     3455544 4776777777


Q ss_pred             CCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcc
Q 017338          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE  204 (373)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~  204 (373)
                      ...++.|||||..|.+ +..|...|..+||+||..+.|||.+|.+.++|..
T Consensus        86 p~~d~eiIf~C~SG~R-s~~A~~~l~s~Gyknv~ny~Gs~~~W~~k~~~~~  135 (136)
T KOG1530|consen   86 PPHDKEIIFGCASGVR-SLKATKILVSAGYKNVGNYPGSYLAWVDKGGPKK  135 (136)
T ss_pred             CCCCCcEEEEeccCcc-hhHHHHHHHHcCcccccccCccHHHHHHccCCCC
Confidence            7788899999998886 8899999999999999999999999999988753

>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily

Probab=99.73  E-value=1.6e-17  Score=132.60  Aligned_cols=98  Identities=21%  Similarity=0.132  Sum_probs=76.8

Q ss_pred             ccHHHHHHhcCC-CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCC
Q 017338           78 VSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  156 (373)
Q Consensus        78 is~~~l~~~l~~-~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~  156 (373)
                      |++++|.+++++ ++++|||||         +.++|+.||||||+|+|+..+...       +  .+...+.+..  +++
T Consensus         1 is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghi~ga~~ip~~~~~~~-------~--~~~~~~~~~~--~~~   60 (100)
T cd01523           1 LDPEDLYARLLAGQPLFILDVR---------NESDYERWKIDGENNTPYFDPYFD-------F--LEIEEDILDQ--LPD   60 (100)
T ss_pred             CCHHHHHHHHHcCCCcEEEEeC---------CHHHHhhcccCCCcccccccchHH-------H--HHhhHHHHhh--CCC
Confidence            688999998876 468999996         458999999999999999875320       0  0001223333  357


Q ss_pred             CCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHH
Q 017338          157 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (373)
Q Consensus       157 ~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~  197 (373)
                      +++||+||..|.+ +..++..|+..||+ ++.|.||+.+|.
T Consensus        61 ~~~ivv~C~~G~r-s~~aa~~L~~~G~~-~~~l~GG~~~W~   99 (100)
T cd01523          61 DQEVTVICAKEGS-SQFVAELLAERGYD-VDYLAGGMKAWS   99 (100)
T ss_pred             CCeEEEEcCCCCc-HHHHHHHHHHcCce-eEEeCCcHHhhc
Confidence            8899999998775 88899999999998 999999999995

This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.

>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4

Probab=99.73  E-value=8.7e-18  Score=143.25  Aligned_cols=87  Identities=26%  Similarity=0.433  Sum_probs=77.0

Q ss_pred             CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCcEEEEcCCchHHHH
Q 017338          259 TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACI  338 (373)
Q Consensus       259 ~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~IvvyC~~G~ra~~  338 (373)
                      +.+|||+|++.+|           +.||||||+|+|.             ++|++.+.+  ++++++|||||.+|.+|..
T Consensus        11 ~~~ivDvR~~~e~-----------~~gHIpgAi~~~~-------------~~l~~~l~~--l~~~~~vVv~c~~g~~a~~   64 (145)
T cd01535          11 QTAVVDVTASANY-----------VKRHIPGAWWVLR-------------AQLAQALEK--LPAAERYVLTCGSSLLARF   64 (145)
T ss_pred             CeEEEECCCHHHH-----------HcCCCCCceeCCH-------------HHHHHHHHh--cCCCCCEEEEeCCChHHHH
Confidence            5899999999999           8999999999975             345555664  4568999999999999999


Q ss_pred             HHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          339 LALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       339 a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +++.|+..|+++|++|+||+.+|... |+|++++
T Consensus        65 aa~~L~~~G~~~v~~L~GG~~aW~~~-g~pl~~~   97 (145)
T cd01535          65 AAADLAALTVKPVFVLEGGTAAWIAA-GLPVESG   97 (145)
T ss_pred             HHHHHHHcCCcCeEEecCcHHHHHHC-CCCcccC
Confidence            99999999999999999999999999 9999864

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.

>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily

Probab=99.73  E-value=1.6e-17  Score=131.59  Aligned_cols=94  Identities=26%  Similarity=0.385  Sum_probs=72.5

Q ss_pred             HHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCe
Q 017338           80 VDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDG  159 (373)
Q Consensus        80 ~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~~~~  159 (373)
                      ++||.+.  +++++|||+|        + ..+|..||||||+|+|+..+..          ..+.++. +..  ++++++
T Consensus         3 ~~~l~~~--~~~~~iiDvR--------~-~~~~~~~hIpgA~~ip~~~~~~----------~~~~~~~-~~~--~~~~~~   58 (96)
T cd01529           3 ADWLGEH--EPGTALLDVR--------A-EDEYAAGHLPGKRSIPGAALVL----------RSQELQA-LEA--PGRATR   58 (96)
T ss_pred             hHHHhcC--CCCeEEEeCC--------C-HHHHcCCCCCCcEeCCHHHhcC----------CHHHHHH-hhc--CCCCCC
Confidence            4566653  4578999996        3 4899999999999999875422          2334443 332  467889


Q ss_pred             EEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHh
Q 017338          160 LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (373)
Q Consensus       160 VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~  198 (373)
                      ||+||..|.+ +.++++.|+.+||++|++|+||+.+|++
T Consensus        59 ivv~c~~g~~-s~~~~~~l~~~G~~~v~~l~GG~~~W~~   96 (96)
T cd01529          59 YVLTCDGSLL-ARFAAQELLALGGKPVALLDGGTSAWVA   96 (96)
T ss_pred             EEEEeCChHH-HHHHHHHHHHcCCCCEEEeCCCHHHhcC
Confidence            9999997665 7778888999999999999999999963

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.

>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily

Probab=99.72  E-value=1.5e-17  Score=130.08  Aligned_cols=89  Identities=22%  Similarity=0.333  Sum_probs=74.1

Q ss_pred             ccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 017338           78 VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENK  157 (373)
Q Consensus        78 is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~~  157 (373)
                      ++++++.++++ ++.+|||+|         +.++|..||||||+|+|+..+                 ...+..  ++++
T Consensus         1 ~~~~e~~~~~~-~~~~iiD~R---------~~~~~~~~hipgA~~ip~~~~-----------------~~~~~~--~~~~   51 (90)
T cd01524           1 VQWHELDNYRA-DGVTLIDVR---------TPQEFEKGHIKGAINIPLDEL-----------------RDRLNE--LPKD   51 (90)
T ss_pred             CCHHHHHHHhc-CCCEEEECC---------CHHHHhcCCCCCCEeCCHHHH-----------------HHHHHh--cCCC
Confidence            57899999884 477899996         568999999999999998653                 333333  4678


Q ss_pred             CeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHH
Q 017338          158 DGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (373)
Q Consensus       158 ~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~  197 (373)
                      ++||+||..|.+ +..++..|+.+|+ ++++|+||+.+|+
T Consensus        52 ~~vvl~c~~g~~-a~~~a~~L~~~G~-~v~~l~GG~~~w~   89 (90)
T cd01524          52 KEIIVYCAVGLR-GYIAARILTQNGF-KVKNLDGGYKTYS   89 (90)
T ss_pred             CcEEEEcCCChh-HHHHHHHHHHCCC-CEEEecCCHHHhc
Confidence            899999997654 8889999999999 9999999999996

Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.

>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily

Probab=99.72  E-value=1.9e-17  Score=130.73  Aligned_cols=91  Identities=33%  Similarity=0.467  Sum_probs=77.1

Q ss_pred             ccHHHHHHhcCC-CCeEEEEeecCCCCCCCCChhhhhh--CCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 017338           78 VSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQV--AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (373)
Q Consensus        78 is~~~l~~~l~~-~~~~iiDvR~~~~~~~r~~~~ey~~--gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi  154 (373)
                      |+++++.+++++ .+++|||+|         +..+|..  ||||||+|+|+..+.                 +.+..  +
T Consensus         2 i~~~~~~~~~~~~~~~~ivDvR---------~~~e~~~~~~hi~ga~~ip~~~~~-----------------~~~~~--~   53 (96)
T cd01444           2 ISVDELAELLAAGEAPVLLDVR---------DPASYAALPDHIPGAIHLDEDSLD-----------------DWLGD--L   53 (96)
T ss_pred             cCHHHHHHHHhcCCCcEEEECC---------CHHHHhcccCCCCCCeeCCHHHHH-----------------HHHhh--c
Confidence            788999998876 569999996         4579999  999999999987542                 23333  4


Q ss_pred             CCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHH
Q 017338          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (373)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~  197 (373)
                      +++++||+||..|. ++.++++.|+.+||++|++|+||+.+|+
T Consensus        54 ~~~~~ivv~c~~g~-~s~~a~~~l~~~G~~~v~~l~gG~~~w~   95 (96)
T cd01444          54 DRDRPVVVYCYHGN-SSAQLAQALREAGFTDVRSLAGGFEAWR   95 (96)
T ss_pred             CCCCCEEEEeCCCC-hHHHHHHHHHHcCCceEEEcCCCHHHhc
Confidence            68899999999665 4999999999999999999999999996

Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.

>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1

Probab=99.71  E-value=2.9e-17  Score=135.06  Aligned_cols=103  Identities=16%  Similarity=0.110  Sum_probs=83.2

Q ss_pred             ccHHHHHHhcCC-CCeEEEEeecCCCCCCCCChhhhh-hCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 017338           78 VSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQ-VAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (373)
Q Consensus        78 is~~~l~~~l~~-~~~~iiDvR~~~~~~~r~~~~ey~-~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~  155 (373)
                      ||++++.+++++ ++.+|||+|         +..+|+ .||||||+|+|+..+..       ..++ +.|...+..+. +
T Consensus         1 is~~el~~~l~~~~~~~vIDvR---------~~~e~~~~ghIpgA~~ip~~~~~~-------~~~~-~~~~~~l~~~~-~   62 (117)
T cd01522           1 LTPAEAWALLQADPQAVLVDVR---------TEAEWKFVGGVPDAVHVAWQVYPD-------MEIN-PNFLAELEEKV-G   62 (117)
T ss_pred             CCHHHHHHHHHhCCCeEEEECC---------CHHHHhcccCCCCceecchhhccc-------cccC-HHHHHHHHhhC-C
Confidence            688999999987 579999996         458999 99999999999987542       1122 23444555543 6


Q ss_pred             CCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhC
Q 017338          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS  199 (373)
Q Consensus       156 ~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~  199 (373)
                      ++++||+||..|.+ +.++++.|+.+||++++.|.||+.+|+..
T Consensus        63 ~~~~ivv~C~~G~r-s~~aa~~L~~~G~~~v~~l~gG~~~~~~~  105 (117)
T cd01522          63 KDRPVLLLCRSGNR-SIAAAEAAAQAGFTNVYNVLEGFEGDLDA  105 (117)
T ss_pred             CCCeEEEEcCCCcc-HHHHHHHHHHCCCCeEEECcCceecCCCC
Confidence            78999999997754 88999999999999999999999999764

This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.

>cd01531 Acr2p Eukaryotic arsenate resistance proteins are members of the Rhodanese Homology Domain superfamily

Probab=99.71  E-value=3e-17  Score=134.06  Aligned_cols=99  Identities=25%  Similarity=0.371  Sum_probs=78.0

Q ss_pred             ccCHHHHHHHhhC--CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCC
Q 017338          245 IWTLEQVKRNIEE--GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  322 (373)
Q Consensus       245 ~is~~el~~~~~~--~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~  322 (373)
                      .|+++++.+.+..  ++.+|||+|++ ||           ..||||||+|+|+..+..         .+.++....++++
T Consensus         3 ~is~~~l~~~~~~~~~~~~iiDvR~~-e~-----------~~~hi~gA~~ip~~~l~~---------~~~~~~~~~~~~~   61 (113)
T cd01531           3 YISPAQLKGWIRNGRPPFQVVDVRDE-DY-----------AGGHIKGSWHYPSTRFKA---------QLNQLVQLLSGSK   61 (113)
T ss_pred             cCCHHHHHHHHHcCCCCEEEEEcCCc-cc-----------CCCcCCCCEecCHHHHhh---------CHHHHHHHHhcCC
Confidence            4788999998876  45789999999 99           789999999999987642         2233333335678


Q ss_pred             CCcEEEEcC-CchHHHHHHHHHHH--------cCCCCceeecccHHHHhcC
Q 017338          323 EKPVVTACG-TGVTACILALGLNR--------LGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       323 ~~~IvvyC~-~G~ra~~a~~~L~~--------~G~~~v~~~~GG~~~W~~~  364 (373)
                      +++||+||. +|.|+..++..|.+        .|+.+|++++||+.+|.+.
T Consensus        62 ~~~iv~yC~~~~~r~~~aa~~l~~~~~~~~~~~G~~~v~~l~gG~~~w~~~  112 (113)
T cd01531          62 KDTVVFHCALSQVRGPSAARKFLRYLDEEDLETSKFEVYVLHGGFNAWESS  112 (113)
T ss_pred             CCeEEEEeecCCcchHHHHHHHHHHHHHhccccCCCeEEEEcChHHHHHhh
Confidence            899999998 67787777665533        4999999999999999864

Included in this CD is the Saccharomyces cerevisiae arsenate reductase protein, Acr2p, and other yeast and plant homologs.

>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4

Probab=99.71  E-value=5.3e-17  Score=138.42  Aligned_cols=96  Identities=30%  Similarity=0.382  Sum_probs=78.6

Q ss_pred             HHHhcCC-CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCeEE
Q 017338           83 LHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLV  161 (373)
Q Consensus        83 l~~~l~~-~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~~~~VV  161 (373)
                      |.+++.. .+++|||+|         +..+|..||||||+|+|...                 |.+.+..++  ++.+||
T Consensus         2 l~~~l~~~~~~~ivDvR---------~~~e~~~gHIpgAi~~~~~~-----------------l~~~l~~l~--~~~~vV   53 (145)
T cd01535           2 LAAWLGEGGQTAVVDVT---------ASANYVKRHIPGAWWVLRAQ-----------------LAQALEKLP--AAERYV   53 (145)
T ss_pred             hHHHHhCCCCeEEEECC---------CHHHHHcCCCCCceeCCHHH-----------------HHHHHHhcC--CCCCEE
Confidence            3444443 358999996         45899999999999997643                 555666664  568899


Q ss_pred             EEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCC
Q 017338          162 VYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (373)
Q Consensus       162 vy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~  207 (373)
                      +||..+. .|..+++.|+..|+++|++|+||+.+|+++|+|+++..
T Consensus        54 v~c~~g~-~a~~aa~~L~~~G~~~v~~L~GG~~aW~~~g~pl~~~~   98 (145)
T cd01535          54 LTCGSSL-LARFAAADLAALTVKPVFVLEGGTAAWIAAGLPVESGE   98 (145)
T ss_pred             EEeCCCh-HHHHHHHHHHHcCCcCeEEecCcHHHHHHCCCCcccCC
Confidence            9999764 58899999999999999999999999999999999764

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.

>cd01532 4RHOD_Repeat_1 Member of the Rhodanese Homology Domain superfamily, repeat 1

Probab=99.70  E-value=1.4e-17  Score=131.05  Aligned_cols=86  Identities=23%  Similarity=0.320  Sum_probs=69.6

Q ss_pred             HhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCcEEEEcCCc
Q 017338          254 NIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTG  333 (373)
Q Consensus       254 ~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~IvvyC~~G  333 (373)
                      ++++++.+|||+|++.||           ..||||||+|+|+..+....            ... -.+++++||+||.+|
T Consensus         5 ~~~~~~~~liDvR~~~e~-----------~~~hi~ga~~ip~~~~~~~~------------~~~-~~~~~~~ivl~c~~G   60 (92)
T cd01532           5 LLAREEIALIDVREEDPF-----------AQSHPLWAANLPLSRLELDA------------WVR-IPRRDTPIVVYGEGG   60 (92)
T ss_pred             hhcCCCeEEEECCCHHHH-----------hhCCcccCeeCCHHHHHhhh------------Hhh-CCCCCCeEEEEeCCC
Confidence            345567899999999999           78999999999987653210            111 123588999999999


Q ss_pred             hH--HHHHHHHHHHcCCCCceeecccHHHHhc
Q 017338          334 VT--ACILALGLNRLGKHDVAVYDGSWTEWGA  363 (373)
Q Consensus       334 ~r--a~~a~~~L~~~G~~~v~~~~GG~~~W~~  363 (373)
                      .+  |..+++.|+.+||++|++++||+.+|.+
T Consensus        61 ~~~~s~~aa~~L~~~G~~~v~~l~GG~~~W~~   92 (92)
T cd01532          61 GEDLAPRAARRLSELGYTDVALLEGGLQGWRA   92 (92)
T ss_pred             CchHHHHHHHHHHHcCccCEEEccCCHHHHcC
Confidence            86  6788999999999999999999999974

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 1st repeat which does not contain the putative catalytic Cys residue.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=99.70  E-value=3.6e-17  Score=160.85  Aligned_cols=102  Identities=23%  Similarity=0.353  Sum_probs=88.2

Q ss_pred             ccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCC
Q 017338          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (373)
Q Consensus       245 ~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~  324 (373)
                      .++++++.+.+++ +.+|||+|++.||           ..||||||+|+|+..+             ++.+....+++++
T Consensus         4 ~is~~el~~~l~~-~~~ivDvR~~~e~-----------~~ghIpgAi~ip~~~l-------------~~~~~~~~~~~~~   58 (376)
T PRK08762          4 EISPAEARARAAQ-GAVLIDVREAHER-----------ASGQAEGALRIPRGFL-------------ELRIETHLPDRDR   58 (376)
T ss_pred             eeCHHHHHHHHhC-CCEEEECCCHHHH-----------hCCcCCCCEECCHHHH-------------HHHHhhhcCCCCC
Confidence            3688999988865 4899999999999           7899999999998654             2333433457899


Q ss_pred             cEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          325 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       325 ~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +||+||.+|.+|..+++.|+.+||++|++|+|||.+|... |+|+++.
T Consensus        59 ~IvvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~-g~p~~~~  105 (376)
T PRK08762         59 EIVLICASGTRSAHAAATLRELGYTRVASVAGGFSAWKDA-GLPLERP  105 (376)
T ss_pred             eEEEEcCCCcHHHHHHHHHHHcCCCceEeecCcHHHHHhc-CCccccc
Confidence            9999999999999999999999999999999999999988 8999865

>cd01531 Acr2p Eukaryotic arsenate resistance proteins are members of the Rhodanese Homology Domain superfamily

Probab=99.70  E-value=5e-17  Score=132.74  Aligned_cols=101  Identities=23%  Similarity=0.320  Sum_probs=76.9

Q ss_pred             CcccHHHHHHhcCC--CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           76 PVVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        76 ~~is~~~l~~~l~~--~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      ..|++++|.+++.+  ++++|||+|         +. +|..||||||+|+|+..+..             .+..+....+
T Consensus         2 ~~is~~~l~~~~~~~~~~~~iiDvR---------~~-e~~~~hi~gA~~ip~~~l~~-------------~~~~~~~~~~   58 (113)
T cd01531           2 SYISPAQLKGWIRNGRPPFQVVDVR---------DE-DYAGGHIKGSWHYPSTRFKA-------------QLNQLVQLLS   58 (113)
T ss_pred             CcCCHHHHHHHHHcCCCCEEEEEcC---------Cc-ccCCCcCCCCEecCHHHHhh-------------CHHHHHHHHh
Confidence            46899999999876  468899996         45 89999999999999987643             2344444556


Q ss_pred             CCCCCeEEEEcCCCCchHHHHHHHHHH--------cCCCceEEecCCHHHHHhC
Q 017338          154 LENKDGLVVYDGKGIFSAARVWWMFRV--------FGHDRVWVLDGGLPRWRAS  199 (373)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~ra~~~L~~--------~G~~~v~~L~GG~~~W~~~  199 (373)
                      .+++++||+||..++.++..++..|..        .|+.+|++|+||+.+|++.
T Consensus        59 ~~~~~~iv~yC~~~~~r~~~aa~~l~~~~~~~~~~~G~~~v~~l~gG~~~w~~~  112 (113)
T cd01531          59 GSKKDTVVFHCALSQVRGPSAARKFLRYLDEEDLETSKFEVYVLHGGFNAWESS  112 (113)
T ss_pred             cCCCCeEEEEeecCCcchHHHHHHHHHHHHHhccccCCCeEEEEcChHHHHHhh
Confidence            678889999998443335555544432        4999999999999999863

Included in this CD is the Saccharomyces cerevisiae arsenate reductase protein, Acr2p, and other yeast and plant homologs.

>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein

Probab=99.70  E-value=1.4e-17  Score=128.98  Aligned_cols=87  Identities=24%  Similarity=0.491  Sum_probs=74.5

Q ss_pred             HHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCcEEEEcC
Q 017338          252 KRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACG  331 (373)
Q Consensus       252 ~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~IvvyC~  331 (373)
                      .+.+..++..|||+|++.+|           ..||||||+|+|+..+....             ...+++++++||+||.
T Consensus         3 ~~~~~~~~~~iiD~R~~~~~-----------~~~~i~ga~~~~~~~~~~~~-------------~~~~~~~~~~vv~~c~   58 (89)
T cd00158           3 KELLDDEDAVLLDVREPEEY-----------AAGHIPGAINIPLSELEERA-------------ALLELDKDKPIVVYCR   58 (89)
T ss_pred             HHHhcCCCeEEEECCCHHHH-----------hccccCCCEecchHHHhhHH-------------HhhccCCCCeEEEEeC
Confidence            34444567999999999999           78999999999997754321             2236789999999999


Q ss_pred             CchHHHHHHHHHHHcCCCCceeecccHHHHh
Q 017338          332 TGVTACILALGLNRLGKHDVAVYDGSWTEWG  362 (373)
Q Consensus       332 ~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~  362 (373)
                      .|.+|..++..|+.+||.++++|+||+.+|.
T Consensus        59 ~~~~a~~~~~~l~~~G~~~v~~l~gG~~~w~   89 (89)
T cd00158          59 SGNRSARAAKLLRKAGGTNVYNLEGGMLAWK   89 (89)
T ss_pred             CCchHHHHHHHHHHhCcccEEEecCChhhcC
Confidence            9999999999999999999999999999994

The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.

>cd01532 4RHOD_Repeat_1 Member of the Rhodanese Homology Domain superfamily, repeat 1

Probab=99.70  E-value=4.9e-17  Score=127.87  Aligned_cols=87  Identities=23%  Similarity=0.290  Sum_probs=68.7

Q ss_pred             hcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEEcC
Q 017338           86 NLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG  165 (373)
Q Consensus        86 ~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~~~~VVvy~~  165 (373)
                      ++.+++++|||+|         +..+|..||||||+|+|+..+..               . ....+ .+++++||+||.
T Consensus         5 ~~~~~~~~liDvR---------~~~e~~~~hi~ga~~ip~~~~~~---------------~-~~~~~-~~~~~~ivl~c~   58 (92)
T cd01532           5 LLAREEIALIDVR---------EEDPFAQSHPLWAANLPLSRLEL---------------D-AWVRI-PRRDTPIVVYGE   58 (92)
T ss_pred             hhcCCCeEEEECC---------CHHHHhhCCcccCeeCCHHHHHh---------------h-hHhhC-CCCCCeEEEEeC
Confidence            4556679999996         45899999999999999876421               0 11111 235889999999


Q ss_pred             CCCch-HHHHHHHHHHcCCCceEEecCCHHHHHh
Q 017338          166 KGIFS-AARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (373)
Q Consensus       166 ~g~~~-a~ra~~~L~~~G~~~v~~L~GG~~~W~~  198 (373)
                      .|.+. +.++++.|+..||++|++|+||+.+|.+
T Consensus        59 ~G~~~~s~~aa~~L~~~G~~~v~~l~GG~~~W~~   92 (92)
T cd01532          59 GGGEDLAPRAARRLSELGYTDVALLEGGLQGWRA   92 (92)
T ss_pred             CCCchHHHHHHHHHHHcCccCEEEccCCHHHHcC
Confidence            87654 6899999999999999999999999974

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 1st repeat which does not contain the putative catalytic Cys residue.

>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE

Probab=99.68  E-value=6.5e-17  Score=129.17  Aligned_cols=80  Identities=16%  Similarity=0.263  Sum_probs=68.8

Q ss_pred             CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCcEEEEcCCchHHHH
Q 017338          259 TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACI  338 (373)
Q Consensus       259 ~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~IvvyC~~G~ra~~  338 (373)
                      ...+||+|+++||           ..||||||+|+|+.++             +..+.+...+++++||+||.+|.+|..
T Consensus        18 ~~~lIDvR~~~ef-----------~~ghIpgAinip~~~l-------------~~~l~~~~~~~~~~vvlyC~~G~rS~~   73 (101)
T TIGR02981        18 AEHWIDVRIPEQY-----------QQEHIQGAINIPLKEI-------------KEHIATAVPDKNDTVKLYCNAGRQSGM   73 (101)
T ss_pred             CCEEEECCCHHHH-----------hcCCCCCCEECCHHHH-------------HHHHHHhCCCCCCeEEEEeCCCHHHHH
Confidence            5679999999999           7899999999998654             334444456778899999999999999


Q ss_pred             HHHHHHHcCCCCceeecccHHHHhc
Q 017338          339 LALGLNRLGKHDVAVYDGSWTEWGA  363 (373)
Q Consensus       339 a~~~L~~~G~~~v~~~~GG~~~W~~  363 (373)
                      ++..|+.+||++|+++ ||+.+|.-
T Consensus        74 aa~~L~~~G~~~v~~~-GG~~~~~~   97 (101)
T TIGR02981        74 AKDILLDMGYTHAENA-GGIKDIAM   97 (101)
T ss_pred             HHHHHHHcCCCeEEec-CCHHHhhh
Confidence            9999999999999986 99999964

Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.

>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.68  E-value=9.4e-17  Score=129.81  Aligned_cols=96  Identities=25%  Similarity=0.470  Sum_probs=82.0

Q ss_pred             HHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCC-CcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCcEEEEc
Q 017338          252 KRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPG-SKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTAC  330 (373)
Q Consensus       252 ~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpG-A~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~IvvyC  330 (373)
                      ......++.+|||+|++.||           ..+|||| ++|+|..++.......             .++++++|||||
T Consensus        13 ~~~~~~~~~~liDvR~~~e~-----------~~~~i~~~~~~ip~~~~~~~~~~~-------------~~~~~~~ivv~C   68 (110)
T COG0607          13 ALLLAGEDAVLLDVREPEEY-----------ERGHIPGAAINIPLSELKAAENLL-------------ELPDDDPIVVYC   68 (110)
T ss_pred             HHhhccCCCEEEeccChhHh-----------hhcCCCcceeeeecccchhhhccc-------------ccCCCCeEEEEe
Confidence            33344567999999999999           8999999 9999999886543211             046899999999


Q ss_pred             CCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          331 GTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       331 ~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      .+|.||..++..|+.+||.++++++||+.+|... ++|++.+
T Consensus        69 ~~G~rS~~aa~~L~~~G~~~~~~l~gG~~~w~~~-~~~~~~~  109 (110)
T COG0607          69 ASGVRSAAAAAALKLAGFTNVYNLDGGIDAWKGA-GLPLVRG  109 (110)
T ss_pred             CCCCChHHHHHHHHHcCCccccccCCcHHHHHhc-CCCcccC
Confidence            9999999999999999999888999999999999 8998764

>PRK01415 hypothetical protein; Validated

Probab=99.67  E-value=1.5e-16  Score=145.97  Aligned_cols=102  Identities=11%  Similarity=0.111  Sum_probs=86.5

Q ss_pred             CccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHH-HcCC
Q 017338          242 PHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE-QEGI  320 (373)
Q Consensus       242 ~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~-~~gi  320 (373)
                      ....|+++++.+++++++.+|||+|++.||           ..||||||+|+|...+.+          +.+.+. ...+
T Consensus       110 ~g~~i~p~e~~~ll~~~~~vvIDVRn~~E~-----------~~Ghi~gAinip~~~f~e----------~~~~~~~~~~~  168 (247)
T PRK01415        110 KGEYIEPKDWDEFITKQDVIVIDTRNDYEV-----------EVGTFKSAINPNTKTFKQ----------FPAWVQQNQEL  168 (247)
T ss_pred             CccccCHHHHHHHHhCCCcEEEECCCHHHH-----------hcCCcCCCCCCChHHHhh----------hHHHHhhhhhh
Confidence            445789999999999889999999999999           789999999999876532          111111 1236


Q ss_pred             CCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcC
Q 017338          321 SLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       321 ~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~  364 (373)
                      +++++|++||.+|.||..++..|+..||++|+.|.||+.+|...
T Consensus       169 ~k~k~Iv~yCtgGiRs~kAa~~L~~~Gf~~Vy~L~GGi~~w~~~  212 (247)
T PRK01415        169 LKGKKIAMVCTGGIRCEKSTSLLKSIGYDEVYHLKGGILQYLED  212 (247)
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHcCCCcEEEechHHHHHHHh
Confidence            78999999999999999999999999999999999999999875

>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional

Probab=99.67  E-value=1e-16  Score=128.64  Aligned_cols=80  Identities=19%  Similarity=0.305  Sum_probs=69.3

Q ss_pred             CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCcEEEEcCCchHHH
Q 017338          258 GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTAC  337 (373)
Q Consensus       258 ~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~IvvyC~~G~ra~  337 (373)
                      .+-+|||+|+++||           +.||||||+|+|+.+             +.+.+.+.+.+++++||+||.+|.+|.
T Consensus        19 ~~~~lIDvR~~~ef-----------~~ghIpGAiniP~~~-------------l~~~l~~l~~~~~~~IVlyC~~G~rS~   74 (104)
T PRK10287         19 AAEHWIDVRVPEQY-----------QQEHVQGAINIPLKE-------------VKERIATAVPDKNDTVKLYCNAGRQSG   74 (104)
T ss_pred             CCCEEEECCCHHHH-----------hcCCCCccEECCHHH-------------HHHHHHhcCCCCCCeEEEEeCCChHHH
Confidence            34579999999999           789999999999865             334455556677889999999999999


Q ss_pred             HHHHHHHHcCCCCceeecccHHHHh
Q 017338          338 ILALGLNRLGKHDVAVYDGSWTEWG  362 (373)
Q Consensus       338 ~a~~~L~~~G~~~v~~~~GG~~~W~  362 (373)
                      .++..|..+||++|++ .||+.+|.
T Consensus        75 ~aa~~L~~~G~~~v~~-~GG~~~~~   98 (104)
T PRK10287         75 QAKEILSEMGYTHAEN-AGGLKDIA   98 (104)
T ss_pred             HHHHHHHHcCCCeEEe-cCCHHHHh
Confidence            9999999999999987 69999996

>cd01443 Cdc25_Acr2p Cdc25 enzymes are members of the Rhodanese Homology Domain (RHOD) superfamily

Probab=99.67  E-value=2e-16  Score=129.13  Aligned_cols=99  Identities=21%  Similarity=0.348  Sum_probs=72.8

Q ss_pred             CcccHHHHHHhcCCC------CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHH
Q 017338           76 PVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV  149 (373)
Q Consensus        76 ~~is~~~l~~~l~~~------~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l  149 (373)
                      ..|++++|++++.++      +++|||||         +. +|..||||||+|+|+..+..             .+.+.+
T Consensus         2 ~~is~~el~~~l~~~~~~~~~~~~iiDvR---------~~-ef~~ghipgAi~ip~~~~~~-------------~~~~~~   58 (113)
T cd01443           2 KYISPEELVALLENSDSNAGKDFVVVDLR---------RD-DYEGGHIKGSINLPAQSCYQ-------------TLPQVY   58 (113)
T ss_pred             cccCHHHHHHHHhCCccccCCcEEEEECC---------ch-hcCCCcccCceecchhHHHH-------------HHHHHH
Confidence            358999999999874      58999996         44 89999999999999987543             233333


Q ss_pred             HHcCCCCCCeEEEEcCCCCchHHHHHHHHH----HcCC--CceEEecCCHHHHH
Q 017338          150 SALGLENKDGLVVYDGKGIFSAARVWWMFR----VFGH--DRVWVLDGGLPRWR  197 (373)
Q Consensus       150 ~~~gi~~~~~VVvy~~~g~~~a~ra~~~L~----~~G~--~~v~~L~GG~~~W~  197 (373)
                      ..+...+.++||+||..++.++++++..|.    ..|+  .++++|+||+.+|.
T Consensus        59 ~~~~~~~~~~iv~~C~~~g~rs~~a~~~l~~~l~~~G~~~~~v~~l~GG~~~w~  112 (113)
T cd01443          59 ALFSLAGVKLAIFYCGSSQGRGPRAARWFADYLRKVGESLPKSYILTGGIKAWY  112 (113)
T ss_pred             HHhhhcCCCEEEEECCCCCcccHHHHHHHHHHHhccCCCCCeEEEECChhhhhc
Confidence            433334567899999975444666653333    3465  78999999999995

Also included in this CD are eukaryotic arsenate resistance proteins such as Saccharomyces cerevisiae Acr2p and similar proteins. Cdc25 phosphatases activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. The Cdc25 and Acr2p RHOD domains have the signature motif (H/YCxxxxxR).

>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein

Probab=99.66  E-value=2.1e-16  Score=122.42  Aligned_cols=88  Identities=31%  Similarity=0.539  Sum_probs=72.8

Q ss_pred             HHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEE
Q 017338           83 LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVV  162 (373)
Q Consensus        83 l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~~~~VVv  162 (373)
                      +.+++.+++.+|||+|         +..+|..||||||+|+|+..+..                 .....+++++++||+
T Consensus         2 ~~~~~~~~~~~iiD~R---------~~~~~~~~~i~ga~~~~~~~~~~-----------------~~~~~~~~~~~~vv~   55 (89)
T cd00158           2 LKELLDDEDAVLLDVR---------EPEEYAAGHIPGAINIPLSELEE-----------------RAALLELDKDKPIVV   55 (89)
T ss_pred             hHHHhcCCCeEEEECC---------CHHHHhccccCCCEecchHHHhh-----------------HHHhhccCCCCeEEE
Confidence            4455556689999997         45889999999999999986532                 113457789999999


Q ss_pred             EcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHH
Q 017338          163 YDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (373)
Q Consensus       163 y~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~  197 (373)
                      ||..+. .+.++++.|+.+||+++++|+||+.+|.
T Consensus        56 ~c~~~~-~a~~~~~~l~~~G~~~v~~l~gG~~~w~   89 (89)
T cd00158          56 YCRSGN-RSARAAKLLRKAGGTNVYNLEGGMLAWK   89 (89)
T ss_pred             EeCCCc-hHHHHHHHHHHhCcccEEEecCChhhcC
Confidence            999765 4899999999999999999999999994

The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.

>cd01443 Cdc25_Acr2p Cdc25 enzymes are members of the Rhodanese Homology Domain (RHOD) superfamily

Probab=99.66  E-value=3.1e-16  Score=128.03  Aligned_cols=98  Identities=18%  Similarity=0.313  Sum_probs=72.9

Q ss_pred             ccCHHHHHHHhhCC------CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHc
Q 017338          245 IWTLEQVKRNIEEG------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQE  318 (373)
Q Consensus       245 ~is~~el~~~~~~~------~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~  318 (373)
                      .++++++++++.++      +.+|||+|++ ||           ..||||||+|+|+..+.+.         +...+...
T Consensus         3 ~is~~el~~~l~~~~~~~~~~~~iiDvR~~-ef-----------~~ghipgAi~ip~~~~~~~---------~~~~~~~~   61 (113)
T cd01443           3 YISPEELVALLENSDSNAGKDFVVVDLRRD-DY-----------EGGHIKGSINLPAQSCYQT---------LPQVYALF   61 (113)
T ss_pred             ccCHHHHHHHHhCCccccCCcEEEEECCch-hc-----------CCCcccCceecchhHHHHH---------HHHHHHHh
Confidence            46889999998764      5789999999 99           7899999999999775421         22233322


Q ss_pred             CCCCCCcEEEEcCC-chHHHHHHHHH----HHcCC--CCceeecccHHHHhc
Q 017338          319 GISLEKPVVTACGT-GVTACILALGL----NRLGK--HDVAVYDGSWTEWGA  363 (373)
Q Consensus       319 gi~~~~~IvvyC~~-G~ra~~a~~~L----~~~G~--~~v~~~~GG~~~W~~  363 (373)
                      ...+.++||+||.+ |.||..++..|    +..||  .++++++||+.+|.+
T Consensus        62 ~~~~~~~iv~~C~~~g~rs~~a~~~l~~~l~~~G~~~~~v~~l~GG~~~w~~  113 (113)
T cd01443          62 SLAGVKLAIFYCGSSQGRGPRAARWFADYLRKVGESLPKSYILTGGIKAWYH  113 (113)
T ss_pred             hhcCCCEEEEECCCCCcccHHHHHHHHHHHhccCCCCCeEEEECChhhhhcC
Confidence            23456789999986 67877766443    34575  689999999999963

Also included in this CD are eukaryotic arsenate resistance proteins such as Saccharomyces cerevisiae Acr2p and similar proteins. Cdc25 phosphatases activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. The Cdc25 and Acr2p RHOD domains have the signature motif (H/YCxxxxxR).

>cd01446 DSP_MapKP N-terminal regulatory rhodanese domain of dual specificity phosphatases (DSP), such as Mapk Phosphatase

Probab=99.65  E-value=2.1e-16  Score=132.64  Aligned_cols=109  Identities=27%  Similarity=0.392  Sum_probs=81.1

Q ss_pred             cccHHHHHHhcCC--CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCC---C--CCCCCCCHHHHHHHH
Q 017338           77 VVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT---N--LPHMLPSEEAFAAAV  149 (373)
Q Consensus        77 ~is~~~l~~~l~~--~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~---~--~~~~l~~~e~~~~~l  149 (373)
                      +|++++|.+++..  ++++|||+|         +..+|..||||||+|+|+..+.....   .  ...+++..+.++.+ 
T Consensus         1 ~is~~~l~~~l~~~~~~~~iiDvR---------~~~~~~~~hI~~ai~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-   70 (132)
T cd01446           1 TIDCAWLAALLREGGERLLLLDCR---------PFLEYSSSHIRGAVNVCCPTILRRRLQGGKILLQQLLSCPEDRDRL-   70 (132)
T ss_pred             CcCHHHHHHHHhcCCCCEEEEECC---------CHHHHhhCcccCcEecChHHHHHHhhcccchhhhhhcCCHHHHHHH-
Confidence            4899999999975  479999997         55899999999999999986432110   0  11245566655543 


Q ss_pred             HHcCCCCCCeEEEEcCCCC-----chHHHHHHHHHHcCC-----CceEEecCCHHHHHh
Q 017338          150 SALGLENKDGLVVYDGKGI-----FSAARVWWMFRVFGH-----DRVWVLDGGLPRWRA  198 (373)
Q Consensus       150 ~~~gi~~~~~VVvy~~~g~-----~~a~ra~~~L~~~G~-----~~v~~L~GG~~~W~~  198 (373)
                      ...   ++++|||||+.+.     ..+++++|+++.+++     .+|++|+||+.+|++
T Consensus        71 ~~~---~~~~VVvYd~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~L~GG~~~w~~  126 (132)
T cd01446          71 RRG---ESLAVVVYDESSSDRERLREDSTAESVLGKLLRKLQEGCSVYLLKGGFEQFSS  126 (132)
T ss_pred             hcC---CCCeEEEEeCCCcchhhccccchHHHHHHHHHHhcCCCceEEEEcchHHHHHh
Confidence            332   6789999998765     346777777777776     689999999999975

This domain is believed to determine substrate specificity by binding the substrate, such as ERK2, and activating the C-terminal catalytic domain by inducing a conformational change. This domain has homology to the Rhodanese Homology Domain.

>PRK00142 putative rhodanese-related sulfurtransferase; Provisional

Probab=99.63  E-value=1.2e-15  Score=145.70  Aligned_cols=102  Identities=22%  Similarity=0.333  Sum_probs=85.0

Q ss_pred             CCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHH-HH
Q 017338           73 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV-SA  151 (373)
Q Consensus        73 ~~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l-~~  151 (373)
                      .....|+++++.+++.+++++|||||        + ..||..||||||+|+|+..+.+              |...+ +.
T Consensus       109 ~~~~~is~~el~~~l~~~~~vlIDVR--------~-~~E~~~GhI~GAi~ip~~~~~~--------------~~~~l~~~  165 (314)
T PRK00142        109 NVGTYLKPKEVNELLDDPDVVFIDMR--------N-DYEYEIGHFENAIEPDIETFRE--------------FPPWVEEN  165 (314)
T ss_pred             cCCcccCHHHHHHHhcCCCeEEEECC--------C-HHHHhcCcCCCCEeCCHHHhhh--------------hHHHHHHh
Confidence            45678999999999998889999996        4 4899999999999999987643              11122 34


Q ss_pred             cCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHh
Q 017338          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (373)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~  198 (373)
                      +++.++++||+||..|.+ +..++..|+..||++|+.|+||+.+|..
T Consensus       166 ~~~~kdk~IvvyC~~G~R-s~~aa~~L~~~Gf~~V~~L~GGi~~w~~  211 (314)
T PRK00142        166 LDPLKDKKVVMYCTGGIR-CEKASAWMKHEGFKEVYQLEGGIITYGE  211 (314)
T ss_pred             cCCCCcCeEEEECCCCcH-HHHHHHHHHHcCCCcEEEecchHHHHHH
Confidence            566789999999998776 6777778899999999999999999975

>PRK01415 hypothetical protein; Validated

Probab=99.63  E-value=1.1e-15  Score=140.32  Aligned_cols=103  Identities=19%  Similarity=0.225  Sum_probs=85.3

Q ss_pred             CCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHH-H
Q 017338           73 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS-A  151 (373)
Q Consensus        73 ~~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~-~  151 (373)
                      .....|+++++.+++++++++|||||        + ..||..||||||+|+|+..+.+              |.+++. .
T Consensus       109 ~~g~~i~p~e~~~ll~~~~~vvIDVR--------n-~~E~~~Ghi~gAinip~~~f~e--------------~~~~~~~~  165 (247)
T PRK01415        109 FKGEYIEPKDWDEFITKQDVIVIDTR--------N-DYEVEVGTFKSAINPNTKTFKQ--------------FPAWVQQN  165 (247)
T ss_pred             cCccccCHHHHHHHHhCCCcEEEECC--------C-HHHHhcCCcCCCCCCChHHHhh--------------hHHHHhhh
Confidence            35778999999999998899999996        4 4899999999999999887643              222221 2


Q ss_pred             cCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhC
Q 017338          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS  199 (373)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~  199 (373)
                      ..+.++++|++||..|.+ +..++..|+..||++|+.|.||+.+|.+.
T Consensus       166 ~~~~k~k~Iv~yCtgGiR-s~kAa~~L~~~Gf~~Vy~L~GGi~~w~~~  212 (247)
T PRK01415        166 QELLKGKKIAMVCTGGIR-CEKSTSLLKSIGYDEVYHLKGGILQYLED  212 (247)
T ss_pred             hhhcCCCeEEEECCCChH-HHHHHHHHHHcCCCcEEEechHHHHHHHh
Confidence            335688999999997765 88888999999999999999999999864

>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE

Probab=99.60  E-value=1.9e-15  Score=120.68  Aligned_cols=80  Identities=16%  Similarity=0.199  Sum_probs=67.7

Q ss_pred             CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEEcCCCCc
Q 017338           90 PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIF  169 (373)
Q Consensus        90 ~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~~~~VVvy~~~g~~  169 (373)
                      .+..+||+|         +.++|..||||||+|+|+.++                 ...+..+..+++++||+||..|.+
T Consensus        17 ~~~~lIDvR---------~~~ef~~ghIpgAinip~~~l-----------------~~~l~~~~~~~~~~vvlyC~~G~r   70 (101)
T TIGR02981        17 AAEHWIDVR---------IPEQYQQEHIQGAINIPLKEI-----------------KEHIATAVPDKNDTVKLYCNAGRQ   70 (101)
T ss_pred             cCCEEEECC---------CHHHHhcCCCCCCEECCHHHH-----------------HHHHHHhCCCCCCeEEEEeCCCHH
Confidence            357799996         568999999999999998653                 345666667788899999998765


Q ss_pred             hHHHHHHHHHHcCCCceEEecCCHHHHH
Q 017338          170 SAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (373)
Q Consensus       170 ~a~ra~~~L~~~G~~~v~~L~GG~~~W~  197 (373)
                       |..++..|+.+||+++.++ ||+.+|.
T Consensus        71 -S~~aa~~L~~~G~~~v~~~-GG~~~~~   96 (101)
T TIGR02981        71 -SGMAKDILLDMGYTHAENA-GGIKDIA   96 (101)
T ss_pred             -HHHHHHHHHHcCCCeEEec-CCHHHhh
Confidence             8899999999999999985 9999996

Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.

>PRK05320 rhodanese superfamily protein; Provisional

Probab=99.60  E-value=1.8e-15  Score=140.58  Aligned_cols=101  Identities=17%  Similarity=0.272  Sum_probs=82.6

Q ss_pred             cccCHHHHHHHhhCC------CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHH
Q 017338          244 LIWTLEQVKRNIEEG------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  317 (373)
Q Consensus       244 ~~is~~el~~~~~~~------~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~  317 (373)
                      ..++++++.+.+++.      +.+|||||++.||           ..||||||+|+|+.++.+.      ++.+++... 
T Consensus       110 ~~is~~el~~~l~~~~~~~~~~~vlIDVR~~~E~-----------~~Ghi~GAiniPl~~f~~~------~~~l~~~~~-  171 (257)
T PRK05320        110 PSVDAATLKRWLDQGHDDAGRPVVMLDTRNAFEV-----------DVGTFDGALDYRIDKFTEF------PEALAAHRA-  171 (257)
T ss_pred             ceeCHHHHHHHHhccccccCCCeEEEECCCHHHH-----------ccCccCCCEeCChhHhhhh------HHHHHhhhh-
Confidence            458889998887652      4789999999999           7899999999999776431      122333322 


Q ss_pred             cCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcC
Q 017338          318 EGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       318 ~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~  364 (373)
                       .+ ++++||+||.+|.||..++..|+..||++|+.+.||+.+|.+.
T Consensus       172 -~~-kdk~IvvyC~~G~Rs~~Aa~~L~~~Gf~~V~~L~GGi~~w~~~  216 (257)
T PRK05320        172 -DL-AGKTVVSFCTGGIRCEKAAIHMQEVGIDNVYQLEGGILKYFEE  216 (257)
T ss_pred             -hc-CCCeEEEECCCCHHHHHHHHHHHHcCCcceEEeccCHHHHHHh
Confidence             13 7899999999999999999999999999999999999999865

>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional

Probab=99.59  E-value=4.6e-15  Score=119.05  Aligned_cols=81  Identities=16%  Similarity=0.231  Sum_probs=68.7

Q ss_pred             CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEEcCCCCc
Q 017338           90 PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIF  169 (373)
Q Consensus        90 ~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~~~~VVvy~~~g~~  169 (373)
                      .+-+|||+|         +.++|+.||||||+|+|+..                 |.+.++.++.+++++||+||..|. 
T Consensus        19 ~~~~lIDvR---------~~~ef~~ghIpGAiniP~~~-----------------l~~~l~~l~~~~~~~IVlyC~~G~-   71 (104)
T PRK10287         19 AAEHWIDVR---------VPEQYQQEHVQGAINIPLKE-----------------VKERIATAVPDKNDTVKLYCNAGR-   71 (104)
T ss_pred             CCCEEEECC---------CHHHHhcCCCCccEECCHHH-----------------HHHHHHhcCCCCCCeEEEEeCCCh-
Confidence            356799996         56999999999999999864                 444677788888899999999765 


Q ss_pred             hHHHHHHHHHHcCCCceEEecCCHHHHHh
Q 017338          170 SAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (373)
Q Consensus       170 ~a~ra~~~L~~~G~~~v~~L~GG~~~W~~  198 (373)
                      +|..+++.|..+||++|++ .||+.+|.-
T Consensus        72 rS~~aa~~L~~~G~~~v~~-~GG~~~~~~   99 (104)
T PRK10287         72 QSGQAKEILSEMGYTHAEN-AGGLKDIAM   99 (104)
T ss_pred             HHHHHHHHHHHcCCCeEEe-cCCHHHHhh
Confidence            4899999999999999987 699999963

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=99.59  E-value=1.8e-15  Score=149.33  Aligned_cols=99  Identities=23%  Similarity=0.452  Sum_probs=85.3

Q ss_pred             CccccCHHHHHHHhhCC-CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCC
Q 017338          242 PHLIWTLEQVKRNIEEG-TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI  320 (373)
Q Consensus       242 ~~~~is~~el~~~~~~~-~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi  320 (373)
                      ....++++|+.+.++++ +.+|||+|+++||           ..||||||+|+|+..+...       +.    +.  .+
T Consensus       285 ~~~~Is~~el~~~l~~~~~~~lIDvR~~~ef-----------~~ghIpGAinip~~~l~~~-------~~----~~--~l  340 (392)
T PRK07878        285 AGSTITPRELKEWLDSGKKIALIDVREPVEW-----------DIVHIPGAQLIPKSEILSG-------EA----LA--KL  340 (392)
T ss_pred             CCCccCHHHHHHHHhCCCCeEEEECCCHHHH-----------hcCCCCCCEEcChHHhcch-------hH----Hh--hC
Confidence            44578999999988754 5789999999999           7999999999999876531       11    12  36


Q ss_pred             CCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcC
Q 017338          321 SLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       321 ~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~  364 (373)
                      +++++||+||.+|.+|..+++.|+..||++|++|+||+.+|...
T Consensus       341 ~~d~~iVvyC~~G~rS~~aa~~L~~~G~~~V~~L~GG~~~W~~~  384 (392)
T PRK07878        341 PQDRTIVLYCKTGVRSAEALAALKKAGFSDAVHLQGGVVAWAKQ  384 (392)
T ss_pred             CCCCcEEEEcCCChHHHHHHHHHHHcCCCcEEEecCcHHHHHHh
Confidence            88999999999999999999999999999999999999999887

>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.57  E-value=1.5e-14  Score=116.82  Aligned_cols=98  Identities=30%  Similarity=0.515  Sum_probs=79.0

Q ss_pred             HHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcC-ceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCe
Q 017338           81 DWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPG-ALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDG  159 (373)
Q Consensus        81 ~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpG-Ai~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~~~~  159 (373)
                      .........++.+|||||        ++ .||+.+|||| ++|+|+..+....                 .....+++++
T Consensus        10 ~~~~~~~~~~~~~liDvR--------~~-~e~~~~~i~~~~~~ip~~~~~~~~-----------------~~~~~~~~~~   63 (110)
T COG0607          10 DEAALLLAGEDAVLLDVR--------EP-EEYERGHIPGAAINIPLSELKAAE-----------------NLLELPDDDP   63 (110)
T ss_pred             HHHHHhhccCCCEEEecc--------Ch-hHhhhcCCCcceeeeecccchhhh-----------------cccccCCCCe
Confidence            333344445579999995        55 8999999999 9999999875411                 0111568899


Q ss_pred             EEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCccc
Q 017338          160 LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (373)
Q Consensus       160 VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~  205 (373)
                      +|+||..|.+ +..++..|+..||++++.++||+.+|...++++..
T Consensus        64 ivv~C~~G~r-S~~aa~~L~~~G~~~~~~l~gG~~~w~~~~~~~~~  108 (110)
T COG0607          64 IVVYCASGVR-SAAAAAALKLAGFTNVYNLDGGIDAWKGAGLPLVR  108 (110)
T ss_pred             EEEEeCCCCC-hHHHHHHHHHcCCccccccCCcHHHHHhcCCCccc
Confidence            9999998876 88899999999999888999999999999998865

>PRK05320 rhodanese superfamily protein; Provisional

Probab=99.57  E-value=1e-14  Score=135.58  Aligned_cols=101  Identities=24%  Similarity=0.341  Sum_probs=80.4

Q ss_pred             CCCcccHHHHHHhcCC------CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHH
Q 017338           74 KEPVVSVDWLHANLRE------PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~------~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~  147 (373)
                      ....|+++++.+++.+      ++++|||||         +..||+.||||||+|+|+..+.+              |..
T Consensus       108 ~~~~is~~el~~~l~~~~~~~~~~~vlIDVR---------~~~E~~~Ghi~GAiniPl~~f~~--------------~~~  164 (257)
T PRK05320        108 RAPSVDAATLKRWLDQGHDDAGRPVVMLDTR---------NAFEVDVGTFDGALDYRIDKFTE--------------FPE  164 (257)
T ss_pred             cCceeCHHHHHHHHhccccccCCCeEEEECC---------CHHHHccCccCCCEeCChhHhhh--------------hHH
Confidence            4567999999998865      248999996         45899999999999999987643              222


Q ss_pred             HHHHc-CCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHh
Q 017338          148 AVSAL-GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (373)
Q Consensus       148 ~l~~~-gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~  198 (373)
                      ++... ...++++||+||..|.+ +..++..|+..||++|+.|.||+.+|.+
T Consensus       165 ~l~~~~~~~kdk~IvvyC~~G~R-s~~Aa~~L~~~Gf~~V~~L~GGi~~w~~  215 (257)
T PRK05320        165 ALAAHRADLAGKTVVSFCTGGIR-CEKAAIHMQEVGIDNVYQLEGGILKYFE  215 (257)
T ss_pred             HHHhhhhhcCCCeEEEECCCCHH-HHHHHHHHHHcCCcceEEeccCHHHHHH
Confidence            22221 11268899999998775 8888999999999999999999999975

>cd01446 DSP_MapKP N-terminal regulatory rhodanese domain of dual specificity phosphatases (DSP), such as Mapk Phosphatase

Probab=99.57  E-value=4.6e-15  Score=124.51  Aligned_cols=104  Identities=19%  Similarity=0.195  Sum_probs=76.0

Q ss_pred             cCHHHHHHHhhC--CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccC---------CCCCCHHHHHHH
Q 017338          246 WTLEQVKRNIEE--GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS---------QTLLPADELKKR  314 (373)
Q Consensus       246 is~~el~~~~~~--~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~---------~~~~~~~~l~~~  314 (373)
                      |+++++.+.+..  ++.+|||+|+..+|           ..||||||+|+|+..+....         ..+.+ ++.++.
T Consensus         2 is~~~l~~~l~~~~~~~~iiDvR~~~~~-----------~~~hI~~ai~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   69 (132)
T cd01446           2 IDCAWLAALLREGGERLLLLDCRPFLEY-----------SSSHIRGAVNVCCPTILRRRLQGGKILLQQLLSC-PEDRDR   69 (132)
T ss_pred             cCHHHHHHHHhcCCCCEEEEECCCHHHH-----------hhCcccCcEecChHHHHHHhhcccchhhhhhcCC-HHHHHH
Confidence            678999999875  46899999999999           78999999999998654211         01222 233344


Q ss_pred             HHHcCCCCCCcEEEEcCCchH---------HHHHHHHHHH--cCCCCceeecccHHHHhcC
Q 017338          315 FEQEGISLEKPVVTACGTGVT---------ACILALGLNR--LGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       315 ~~~~gi~~~~~IvvyC~~G~r---------a~~a~~~L~~--~G~~~v~~~~GG~~~W~~~  364 (373)
                      +..  . ++++|||||..|.+         +..++..|..  .|+.+|++++||+.+|...
T Consensus        70 l~~--~-~~~~VVvYd~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~L~GG~~~w~~~  127 (132)
T cd01446          70 LRR--G-ESLAVVVYDESSSDRERLREDSTAESVLGKLLRKLQEGCSVYLLKGGFEQFSSE  127 (132)
T ss_pred             Hhc--C-CCCeEEEEeCCCcchhhccccchHHHHHHHHHHhcCCCceEEEEcchHHHHHhh
Confidence            443  2 67899999988764         4444445555  3567899999999999775

This domain is believed to determine substrate specificity by binding the substrate, such as ERK2, and activating the C-terminal catalytic domain by inducing a conformational change. This domain has homology to the Rhodanese Homology Domain.

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=99.56  E-value=1.4e-14  Score=142.96  Aligned_cols=102  Identities=21%  Similarity=0.331  Sum_probs=83.7

Q ss_pred             CCCcccHHHHHHhcCCC-CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHc
Q 017338           74 KEPVVSVDWLHANLREP-DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~-~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~  152 (373)
                      ....|+++++.++++++ +++|||+|         +.++|..||||||+|+|+..+..           .+    .+.  
T Consensus       285 ~~~~Is~~el~~~l~~~~~~~lIDvR---------~~~ef~~ghIpGAinip~~~l~~-----------~~----~~~--  338 (392)
T PRK07878        285 AGSTITPRELKEWLDSGKKIALIDVR---------EPVEWDIVHIPGAQLIPKSEILS-----------GE----ALA--  338 (392)
T ss_pred             CCCccCHHHHHHHHhCCCCeEEEECC---------CHHHHhcCCCCCCEEcChHHhcc-----------hh----HHh--
Confidence            45679999999998764 58999996         46899999999999999987532           01    122  


Q ss_pred             CCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCC
Q 017338          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD  202 (373)
Q Consensus       153 gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~p  202 (373)
                      .++++++||+||..|.+ |.++++.|+..||++|++|+||+.+|.++..+
T Consensus       339 ~l~~d~~iVvyC~~G~r-S~~aa~~L~~~G~~~V~~L~GG~~~W~~~~~~  387 (392)
T PRK07878        339 KLPQDRTIVLYCKTGVR-SAEALAALKKAGFSDAVHLQGGVVAWAKQVDP  387 (392)
T ss_pred             hCCCCCcEEEEcCCChH-HHHHHHHHHHcCCCcEEEecCcHHHHHHhcCC
Confidence            34688999999997765 89999999999999999999999999876543

>PRK07411 hypothetical protein; Validated

Probab=99.55  E-value=6.7e-15  Score=145.05  Aligned_cols=99  Identities=19%  Similarity=0.400  Sum_probs=82.2

Q ss_pred             cccCHHHHHHHhhCC--CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCC
Q 017338          244 LIWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  321 (373)
Q Consensus       244 ~~is~~el~~~~~~~--~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~  321 (373)
                      ..++.+|+.++++++  +.+|||+|++.||           ..||||||+|+|+.++....    ..+++.      .+.
T Consensus       282 ~~Is~~el~~~l~~~~~~~vlIDVR~~~E~-----------~~ghIpGAiniP~~~l~~~~----~~~~l~------~l~  340 (390)
T PRK07411        282 PEMTVTELKALLDSGADDFVLIDVRNPNEY-----------EIARIPGSVLVPLPDIENGP----GVEKVK------ELL  340 (390)
T ss_pred             CccCHHHHHHHHhCCCCCeEEEECCCHHHh-----------ccCcCCCCEEccHHHhhccc----chHHHh------hcC
Confidence            468999999988654  4789999999999           78999999999998875421    112222      256


Q ss_pred             CCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcC
Q 017338          322 LEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       322 ~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~  364 (373)
                      ++++||+||.+|.||..++..|+.+||++ +.++||+.+|..+
T Consensus       341 ~d~~IVvyC~~G~RS~~aa~~L~~~G~~~-~~l~GG~~~W~~~  382 (390)
T PRK07411        341 NGHRLIAHCKMGGRSAKALGILKEAGIEG-TNVKGGITAWSRE  382 (390)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHHcCCCe-EEecchHHHHHHh
Confidence            78999999999999999999999999985 5799999999887

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=99.52  E-value=1.9e-14  Score=140.27  Aligned_cols=95  Identities=21%  Similarity=0.382  Sum_probs=80.0

Q ss_pred             ccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCC
Q 017338          243 HLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  322 (373)
Q Consensus       243 ~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~  322 (373)
                      ...++.+++.+..  .+.+|||+|+++||           ..||||||+|+|+.++.....             ...+++
T Consensus       260 ~~~i~~~~~~~~~--~~~~IIDVR~~~ef-----------~~ghIpgAinip~~~l~~~~~-------------~~~~~~  313 (355)
T PRK05597        260 GEVLDVPRVSALP--DGVTLIDVREPSEF-----------AAYSIPGAHNVPLSAIREGAN-------------PPSVSA  313 (355)
T ss_pred             ccccCHHHHHhcc--CCCEEEECCCHHHH-----------ccCcCCCCEEeCHHHhhhccc-------------cccCCC
Confidence            3467888888553  35789999999999           789999999999987654211             113678


Q ss_pred             CCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhc
Q 017338          323 EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA  363 (373)
Q Consensus       323 ~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~  363 (373)
                      +++||+||.+|.+|..+++.|+.+||++|++|+||+.+|.+
T Consensus       314 ~~~IvvyC~~G~rS~~Aa~~L~~~G~~nV~~L~GGi~~W~~  354 (355)
T PRK05597        314 GDEVVVYCAAGVRSAQAVAILERAGYTGMSSLDGGIEGWLD  354 (355)
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCCCCEEEecCcHHHHhh
Confidence            89999999999999999999999999999999999999965

>PRK11784 tRNA 2-selenouridine synthase; Provisional

Probab=99.52  E-value=1.9e-14  Score=139.02  Aligned_cols=105  Identities=18%  Similarity=0.315  Sum_probs=76.5

Q ss_pred             HHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccC---------C---------CCCCHH
Q 017338          248 LEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS---------Q---------TLLPAD  309 (373)
Q Consensus       248 ~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~---------~---------~~~~~~  309 (373)
                      .+++.+.+. ++.+|||||++.||           ..||||||+|+|+.+..+..         +         .+.+ .
T Consensus         5 ~~~~~~~~~-~~~~lIDVRsp~Ef-----------~~ghIpgAiniPl~~~~er~~vgt~Ykq~g~~~a~~lg~~lv~-~   71 (345)
T PRK11784          5 AQDFRALFL-NDTPLIDVRSPIEF-----------AEGHIPGAINLPLLNDEERAEVGTCYKQQGQFAAIALGHALVA-G   71 (345)
T ss_pred             HHHHHHHHh-CCCEEEECCCHHHH-----------hcCCCCCeeeCCCCChhHHHhhchhhcccCHHHHHHhhhhhcc-h
Confidence            455555543 46899999999999           78999999999996533210         1         1111 2


Q ss_pred             HHHHHHHHc-C-C-CCCCcEEEEc-CCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCC
Q 017338          310 ELKKRFEQE-G-I-SLEKPVVTAC-GTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDT  367 (373)
Q Consensus       310 ~l~~~~~~~-g-i-~~~~~IvvyC-~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~  367 (373)
                      ++.+.+.+. + + +++++||+|| .+|.||..+++.|+.+|| +|++++||+.+|... ++
T Consensus        72 ~l~~~~~~~~~~~~~~~~~ivvyC~rgG~RS~~aa~~L~~~G~-~v~~L~GG~~awr~~-~~  131 (345)
T PRK11784         72 NIAAHREEAWADFPRANPRGLLYCWRGGLRSGSVQQWLKEAGI-DVPRLEGGYKAYRRF-VI  131 (345)
T ss_pred             hHHHHHHHHHHhcccCCCeEEEEECCCChHHHHHHHHHHHcCC-CcEEEcCCHHHHHHh-hH
Confidence            233332221 1 2 3789999999 578999999999999999 699999999999876 44

>TIGR03167 tRNA_sel_U_synt tRNA 2-selenouridine synthase

Probab=99.48  E-value=4.1e-14  Score=134.78  Aligned_cols=98  Identities=23%  Similarity=0.285  Sum_probs=71.1

Q ss_pred             CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccC--CC-CC--------------CHHHHHHHHHHc--C
Q 017338          259 TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS--QT-LL--------------PADELKKRFEQE--G  319 (373)
Q Consensus       259 ~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~--~~-~~--------------~~~~l~~~~~~~--g  319 (373)
                      ...|||||++.||           ..||||||+|+|+.+.....  ++ ++              ....+...+.+.  -
T Consensus         2 ~~~liDVRsp~Ef-----------~~ghipgAiniPl~~~~er~~vgt~ykq~g~~~A~~lg~~~v~~~l~~~i~~~~~~   70 (311)
T TIGR03167         2 FDPLIDVRSPAEF-----------AEGHLPGAINLPLLNDEERAEVGTLYKQVGPFAAIKLGLALVSPNLAAHVEQWRAF   70 (311)
T ss_pred             CCEEEECCCHHHH-----------hcCCCcCCEecccccchhhhhhhhhhhcccHHHHHHHhHhhhhHHHHHHHHHHHhh
Confidence            4579999999999           78999999999995432211  11 11              011233333322  2


Q ss_pred             CCCCCcEEEEc-CCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCC
Q 017338          320 ISLEKPVVTAC-GTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPV  369 (373)
Q Consensus       320 i~~~~~IvvyC-~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv  369 (373)
                      .+++..||+|| .+|.||..+++.|+.+|| +|++++||+.+|... +++.
T Consensus        71 ~~~~~~vvvyC~~gG~RS~~aa~~L~~~G~-~v~~L~GG~~aw~~~-~~~~  119 (311)
T TIGR03167        71 ADGPPQPLLYCWRGGMRSGSLAWLLAQIGF-RVPRLEGGYKAYRRF-VIDQ  119 (311)
T ss_pred             cCCCCcEEEEECCCChHHHHHHHHHHHcCC-CEEEecChHHHHHHh-hhhh
Confidence            34455699999 579999999999999999 699999999999887 5544

The Escherichia coli YbbB protein was shown to encode a selenophosphate-dependent tRNA 2-selenouridine synthase, essential for modification of some tRNAs to replace a sulfur atom with selenium. This enzyme works with SelD, the selenium donor protein, which also acts in selenocysteine incorporation. Although the members of this protein family show a fairly deep split, sequences from both sides of the split are supported by co-occurence with, and often proximity to, the selD gene.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=99.47  E-value=9.6e-14  Score=135.31  Aligned_cols=96  Identities=23%  Similarity=0.360  Sum_probs=77.3

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 017338           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi  154 (373)
                      ...++++++.+...  +.+|||+|         +.++|..||||||+|+|+..+...                 +....+
T Consensus       260 ~~~i~~~~~~~~~~--~~~IIDVR---------~~~ef~~ghIpgAinip~~~l~~~-----------------~~~~~~  311 (355)
T PRK05597        260 GEVLDVPRVSALPD--GVTLIDVR---------EPSEFAAYSIPGAHNVPLSAIREG-----------------ANPPSV  311 (355)
T ss_pred             ccccCHHHHHhccC--CCEEEECC---------CHHHHccCcCCCCEEeCHHHhhhc-----------------cccccC
Confidence            34688899885543  57899996         458999999999999999875431                 111235


Q ss_pred             CCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhC
Q 017338          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS  199 (373)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~  199 (373)
                      +++++||+||..|. ++.++++.|+.+||++|++|+||+.+|.++
T Consensus       312 ~~~~~IvvyC~~G~-rS~~Aa~~L~~~G~~nV~~L~GGi~~W~~~  355 (355)
T PRK05597        312 SAGDEVVVYCAAGV-RSAQAVAILERAGYTGMSSLDGGIEGWLDS  355 (355)
T ss_pred             CCCCeEEEEcCCCH-HHHHHHHHHHHcCCCCEEEecCcHHHHhhC
Confidence            67889999999776 489999999999999999999999999753

>KOG1529 consensus Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase [Defense mechanisms]

Probab=99.45  E-value=3.9e-13  Score=123.24  Aligned_cols=126  Identities=19%  Similarity=0.257  Sum_probs=101.8

Q ss_pred             cccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccC----CCCCCHHHHHHHHHHcC
Q 017338          244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLPADELKKRFEQEG  319 (373)
Q Consensus       244 ~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~----~~~~~~~~l~~~~~~~g  319 (373)
                      .+++.+++.+++.+...+|||+----  .........++..-|||||.++.++.+.+..    .++...+.+++..+.+|
T Consensus         5 ~iv~~~~v~~~~~~~~~~iLDaSw~~--~~~~~~~~~e~~~~hipga~~fdld~~~~~s~~~~~~lp~~e~Fa~y~~~lG   82 (286)
T KOG1529|consen    5 SIVSVKWVMENLGNHGLRILDASWYF--PPLRRIAEFEFLERHIPGASHFDLDIISYPSSPYRHMLPTAEHFAEYASRLG   82 (286)
T ss_pred             cccChHHHHHhCcCCCeEEEeeeeec--CchhhhhhhhhhhccCCCceeeeccccccCCCcccccCccHHHHHHHHHhcC
Confidence            46889999999988889999985200  0000011112256799999999999886653    46778899999999999


Q ss_pred             CCCCCcEEEEcC--Cch-HHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          320 ISLEKPVVTACG--TGV-TACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       320 i~~~~~IvvyC~--~G~-ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +++++.+|||.+  .|+ .|++++|.++.+|+.+|.+++||+..|... ++|++++
T Consensus        83 i~n~d~vViYd~~~~Gm~~Asrv~W~fr~fGh~~VslL~GG~~~Wk~~-g~~~~s~  137 (286)
T KOG1529|consen   83 VDNGDHVVIYDRGDGGMFSASRVWWTFRVFGHTKVSLLNGGFRAWKAA-GGPVDSS  137 (286)
T ss_pred             CCCCCeEEEEcCCCcceeehhhHHHHHHHhCccEEEEecCcHHHHHHc-CCccccc
Confidence            999999999998  776 577999999999999999999999999999 9999875

>PRK07411 hypothetical protein; Validated

Probab=99.43  E-value=3.5e-13  Score=132.92  Aligned_cols=104  Identities=22%  Similarity=0.331  Sum_probs=81.3

Q ss_pred             CCCcccHHHHHHhcCCC--CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHH
Q 017338           74 KEPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~  151 (373)
                      ....|++++|.++++++  +.+|||+|         +.++|..||||||+|+|+..+....        ..+++.    .
T Consensus       280 ~~~~Is~~el~~~l~~~~~~~vlIDVR---------~~~E~~~ghIpGAiniP~~~l~~~~--------~~~~l~----~  338 (390)
T PRK07411        280 EIPEMTVTELKALLDSGADDFVLIDVR---------NPNEYEIARIPGSVLVPLPDIENGP--------GVEKVK----E  338 (390)
T ss_pred             ccCccCHHHHHHHHhCCCCCeEEEECC---------CHHHhccCcCCCCEEccHHHhhccc--------chHHHh----h
Confidence            34579999999988754  58999996         4589999999999999998764310        112222    2


Q ss_pred             cCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCC
Q 017338          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD  202 (373)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~p  202 (373)
                        +.++++||+||..|.+ |.++++.|+.+||++ +.|+||+.+|.++..|
T Consensus       339 --l~~d~~IVvyC~~G~R-S~~aa~~L~~~G~~~-~~l~GG~~~W~~~~~p  385 (390)
T PRK07411        339 --LLNGHRLIAHCKMGGR-SAKALGILKEAGIEG-TNVKGGITAWSREVDP  385 (390)
T ss_pred             --cCCCCeEEEECCCCHH-HHHHHHHHHHcCCCe-EEecchHHHHHHhcCC
Confidence              3468899999997764 899999999999975 5799999999876544

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=99.42  E-value=2e-13  Score=133.43  Aligned_cols=94  Identities=17%  Similarity=0.258  Sum_probs=76.7

Q ss_pred             ccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCC---CCcccCcccccccCCCCCCHHHHHHHHHHcCCC
Q 017338          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVP---GSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  321 (373)
Q Consensus       245 ~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIp---GA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~  321 (373)
                      .++++++.+.+.+++.+|||||++.||           ..||||   ||+|||+.++.+..       +..+.+.  .++
T Consensus       272 ~~~~~el~~~l~~~~~~lIDVR~~~E~-----------~~ghI~~~~gAinIPl~~l~~~~-------~~~~~l~--~~~  331 (370)
T PRK05600        272 RTDTTSLIDATLNGSATLLDVREPHEV-----------LLKDLPEGGASLKLPLSAITDDA-------DILHALS--PID  331 (370)
T ss_pred             ccCHHHHHHHHhcCCeEEEECCCHHHh-----------hhccCCCCCccEeCcHHHhhcch-------hhhhhcc--ccC
Confidence            689999999988777899999999999           789998   69999998875321       0111111  244


Q ss_pred             CCCcEEEEcCCchHHHHHHHHHHHcCCCC-ceeecccHH
Q 017338          322 LEKPVVTACGTGVTACILALGLNRLGKHD-VAVYDGSWT  359 (373)
Q Consensus       322 ~~~~IvvyC~~G~ra~~a~~~L~~~G~~~-v~~~~GG~~  359 (373)
                      ++ +|||||.+|.||..++..|+.+||++ |+++.||+.
T Consensus       332 ~~-~Ivv~C~sG~RS~~Aa~~L~~~G~~~~v~~l~GG~~  369 (370)
T PRK05600        332 GD-NVVVYCASGIRSADFIEKYSHLGHELTLHNLPGGVN  369 (370)
T ss_pred             CC-cEEEECCCChhHHHHHHHHHHcCCCCceEEeccccC
Confidence            44 99999999999999999999999986 999999974

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=99.28  E-value=6.8e-12  Score=122.74  Aligned_cols=94  Identities=22%  Similarity=0.314  Sum_probs=73.6

Q ss_pred             cccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCc---CceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIP---GALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        77 ~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIp---GAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      .++++++.+++.+++.+|||||        + .+||+.||||   ||+|+|+..+.+..           .   .++.+.
T Consensus       272 ~~~~~el~~~l~~~~~~lIDVR--------~-~~E~~~ghI~~~~gAinIPl~~l~~~~-----------~---~~~~l~  328 (370)
T PRK05600        272 RTDTTSLIDATLNGSATLLDVR--------E-PHEVLLKDLPEGGASLKLPLSAITDDA-----------D---ILHALS  328 (370)
T ss_pred             ccCHHHHHHHHhcCCeEEEECC--------C-HHHhhhccCCCCCccEeCcHHHhhcch-----------h---hhhhcc
Confidence            5899999999988778999996        4 5899999998   69999998874310           0   112222


Q ss_pred             CCCCCeEEEEcCCCCchHHHHHHHHHHcCCCc-eEEecCCHH
Q 017338          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDR-VWVLDGGLP  194 (373)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~-v~~L~GG~~  194 (373)
                      ..++++||+||..|.+ |..++..|+..||++ |++|.||+.
T Consensus       329 ~~~~~~Ivv~C~sG~R-S~~Aa~~L~~~G~~~~v~~l~GG~~  369 (370)
T PRK05600        329 PIDGDNVVVYCASGIR-SADFIEKYSHLGHELTLHNLPGGVN  369 (370)
T ss_pred             ccCCCcEEEECCCChh-HHHHHHHHHHcCCCCceEEeccccC
Confidence            2233489999998876 888999999999986 999999985

>COG1054 Predicted sulfurtransferase [General function prediction only]

Probab=99.17  E-value=5.7e-11  Score=109.62  Aligned_cols=102  Identities=13%  Similarity=0.184  Sum_probs=87.3

Q ss_pred             ccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCC
Q 017338          243 HLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  322 (373)
Q Consensus       243 ~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~  322 (373)
                      ...++++++.+++.+++.++||+|...||           .-||..||++.+...+.+-      ++.+++.+.   .-.
T Consensus       112 G~yl~p~~wn~~l~D~~~vviDtRN~YE~-----------~iG~F~gAv~p~~~tFref------P~~v~~~~~---~~~  171 (308)
T COG1054         112 GTYLSPKDWNELLSDPDVVVIDTRNDYEV-----------AIGHFEGAVEPDIETFREF------PAWVEENLD---LLK  171 (308)
T ss_pred             cCccCHHHHHHHhcCCCeEEEEcCcceeE-----------eeeeecCccCCChhhhhhh------HHHHHHHHH---hcc
Confidence            45789999999999999999999999999           8999999999998776532      234444444   346


Q ss_pred             CCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcC
Q 017338          323 EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       323 ~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~  364 (373)
                      +++|++||.+|.|+-.+...|...||++|+.|+||+-.+..+
T Consensus       172 ~KkVvmyCTGGIRCEKas~~m~~~GF~eVyhL~GGIl~Y~e~  213 (308)
T COG1054         172 DKKVVMYCTGGIRCEKASAWMKENGFKEVYHLEGGILKYLED  213 (308)
T ss_pred             CCcEEEEcCCceeehhhHHHHHHhcchhhhcccchHHHHhhh
Confidence            779999999999999999999999999999999999999776

>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional

Probab=99.11  E-value=4.4e-11  Score=121.22  Aligned_cols=73  Identities=25%  Similarity=0.349  Sum_probs=63.5

Q ss_pred             CCcEEEEecCCCccCCCCCCCCCCCCcccCCC----CcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCcEEEEcCCc
Q 017338          258 GTYQLVDARSKARFDGDAPEPRKGIRSGHVPG----SKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTG  333 (373)
Q Consensus       258 ~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpG----A~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~IvvyC~~G  333 (373)
                      ++.++||+|+++||           ..|||||    |+|+|+.++..             .+.  .++++++||+||++|
T Consensus       406 ~~~~lIDVR~~~E~-----------~~~hI~g~~~~a~niP~~~l~~-------------~~~--~l~~~~~iivyC~~G  459 (482)
T PRK01269        406 PDDVIIDIRSPDEQ-----------EDKPLKLEGVEVKSLPFYKLST-------------QFG--DLDQSKTYLLYCDRG  459 (482)
T ss_pred             CCCEEEECCCHHHH-----------hcCCCCCCCceEEECCHHHHHH-------------HHh--hcCCCCeEEEECCCC
Confidence            46789999999999           7899999    99999977642             222  367889999999999


Q ss_pred             hHHHHHHHHHHHcCCCCceeecc
Q 017338          334 VTACILALGLNRLGKHDVAVYDG  356 (373)
Q Consensus       334 ~ra~~a~~~L~~~G~~~v~~~~G  356 (373)
                      .||..++..|+.+||+||++|.+
T Consensus       460 ~rS~~aa~~L~~~G~~nv~~y~~  482 (482)
T PRK01269        460 VMSRLQALYLREQGFSNVKVYRP  482 (482)
T ss_pred             HHHHHHHHHHHHcCCccEEecCC
Confidence            99999999999999999999864

>COG1054 Predicted sulfurtransferase [General function prediction only]

Probab=99.07  E-value=2.6e-10  Score=105.28  Aligned_cols=117  Identities=20%  Similarity=0.298  Sum_probs=88.8

Q ss_pred             hcccccCCCCCCCCCCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCC
Q 017338           59 AAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHM  138 (373)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~  138 (373)
                      .++........+....+..|+|++..+++.++++++||+|        |. -||+.||..||++.+...+.+.       
T Consensus        96 IV~lg~~ddv~p~~~vG~yl~p~~wn~~l~D~~~vviDtR--------N~-YE~~iG~F~gAv~p~~~tFref-------  159 (308)
T COG1054          96 IVALGVEDDVDPLENVGTYLSPKDWNELLSDPDVVVIDTR--------ND-YEVAIGHFEGAVEPDIETFREF-------  159 (308)
T ss_pred             heecCCCCCcCccccccCccCHHHHHHHhcCCCeEEEEcC--------cc-eeEeeeeecCccCCChhhhhhh-------
Confidence            4444444444444555889999999999999999999996        44 7899999999999999888652       


Q ss_pred             CCCHHHHHHHHHHcCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHh
Q 017338          139 LPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (373)
Q Consensus       139 l~~~e~~~~~l~~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~  198 (373)
                         ++.+++.+.   .-++++||.||..|.+..-..+| |...||++|+.|+||+-.+-+
T Consensus       160 ---P~~v~~~~~---~~~~KkVvmyCTGGIRCEKas~~-m~~~GF~eVyhL~GGIl~Y~e  212 (308)
T COG1054         160 ---PAWVEENLD---LLKDKKVVMYCTGGIRCEKASAW-MKENGFKEVYHLEGGILKYLE  212 (308)
T ss_pred             ---HHHHHHHHH---hccCCcEEEEcCCceeehhhHHH-HHHhcchhhhcccchHHHHhh
Confidence               122232322   23677999999999987666666 556699999999999987743

>KOG3772 consensus M-phase inducer phosphatase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.93  E-value=1.7e-09  Score=101.42  Aligned_cols=101  Identities=18%  Similarity=0.241  Sum_probs=73.4

Q ss_pred             CCCcccHHHHHHhcCCC------CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHH
Q 017338           74 KEPVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~------~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~  147 (373)
                      .-..||++.|+.++...      ..+|||||        -| -||..|||+||+|+...+...                .
T Consensus       154 ~~k~Is~etl~~ll~~~~~~~~~~~~iiDcR--------~p-yEY~GGHIkgavnl~~~~~~~----------------~  208 (325)
T KOG3772|consen  154 DLKYISPETLKGLLQGKFSDFFDKFIIIDCR--------YP-YEYEGGHIKGAVNLYSKELLQ----------------D  208 (325)
T ss_pred             cccccCHHHHHHHHHhccccceeeEEEEEeC--------Cc-ccccCcccccceecccHhhhh----------------h
Confidence            34689999999998752      36799997        35 799999999999998775322                1


Q ss_pred             HHHHc-CC---CCCCeEEEEcCCCCchHHHHHHHHHH------------cCCCceEEecCCHHHHHhC
Q 017338          148 AVSAL-GL---ENKDGLVVYDGKGIFSAARVWWMFRV------------FGHDRVWVLDGGLPRWRAS  199 (373)
Q Consensus       148 ~l~~~-gi---~~~~~VVvy~~~g~~~a~ra~~~L~~------------~G~~~v~~L~GG~~~W~~~  199 (373)
                      .+... +.   .+...+||||.....+..+++..|+.            +-|..+++|+||+..|-..
T Consensus       209 ~f~~~~~~~~~~~~~i~IFhCefSq~RGP~mA~~lr~iDR~r~~~~yp~l~ypE~yiL~gGYk~ff~~  276 (325)
T KOG3772|consen  209 FFLLKDGVPSGSKRVILIFHCEFSQERGPKMARHLRNIDRDRNSNDYPKLSYPELYILDGGYKEFFSN  276 (325)
T ss_pred             hhccccccccccCceeEEEEeeeccccCHHHHHHHHHhhhhhhcccCcccccchheeecccHHHHHHh
Confidence            11111 11   13457889999766668888888883            4456899999999999653

>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]

Probab=98.90  E-value=2e-09  Score=100.99  Aligned_cols=105  Identities=17%  Similarity=0.255  Sum_probs=84.2

Q ss_pred             CCccccCHHHHHHHhhC-CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcC
Q 017338          241 QPHLIWTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEG  319 (373)
Q Consensus       241 ~~~~~is~~el~~~~~~-~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~g  319 (373)
                      .++..|+..++++.+++ ...++||+|++-||           +.-|+|+|+|||+.++.+..+     ++    +...-
T Consensus       314 ~~~~Rvsv~d~k~il~~~~~h~llDvRp~~~~-----------eI~~lP~avNIPL~~l~~~~~-----~~----~~~~~  373 (427)
T KOG2017|consen  314 EPDERVSVTDYKRILDSGAKHLLLDVRPSHEY-----------EICRLPEAVNIPLKELRSRSG-----KK----LQGDL  373 (427)
T ss_pred             ChhhcccHHHHHHHHhcCCCeEEEeccCcceE-----------EEEecccccccchhhhhhhhh-----hh----hcccc
Confidence            45668999999999886 57899999999999           899999999999999876543     11    11111


Q ss_pred             CCCCCcEEEEcCCchHHHHHHHHHHHc-CCCCceeecccHHHHhcCC
Q 017338          320 ISLEKPVVTACGTGVTACILALGLNRL-GKHDVAVYDGSWTEWGAQP  365 (373)
Q Consensus       320 i~~~~~IvvyC~~G~ra~~a~~~L~~~-G~~~v~~~~GG~~~W~~~~  365 (373)
                      -+..++|+|.|+.|+.|..+.+.|+.. ...+|+..-||+.+|....
T Consensus       374 ~~~~~~I~ViCrrGNdSQ~Av~~Lre~~~~~~vrDvigGl~~w~~~v  420 (427)
T KOG2017|consen  374 NTESKDIFVICRRGNDSQRAVRILREKFPDSSVRDVIGGLKAWAAKV  420 (427)
T ss_pred             cccCCCEEEEeCCCCchHHHHHHHHhhCCchhhhhhhhHHHHHHHhc
Confidence            234577999999999999999999874 4457888899999998763

>KOG3772 consensus M-phase inducer phosphatase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.83  E-value=6.2e-09  Score=97.72  Aligned_cols=98  Identities=18%  Similarity=0.327  Sum_probs=70.6

Q ss_pred             cccCHHHHHHHhhC------CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHH
Q 017338          244 LIWTLEQVKRNIEE------GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  317 (373)
Q Consensus       244 ~~is~~el~~~~~~------~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~  317 (373)
                      ..||++.|+.++..      ..++|||+|-+-||           ..|||+||+||+..+.....            +..
T Consensus       156 k~Is~etl~~ll~~~~~~~~~~~~iiDcR~pyEY-----------~GGHIkgavnl~~~~~~~~~------------f~~  212 (325)
T KOG3772|consen  156 KYISPETLKGLLQGKFSDFFDKFIIIDCRYPYEY-----------EGGHIKGAVNLYSKELLQDF------------FLL  212 (325)
T ss_pred             cccCHHHHHHHHHhccccceeeEEEEEeCCcccc-----------cCcccccceecccHhhhhhh------------hcc
Confidence            46899999988863      13779999999999           78999999999987654321            110


Q ss_pred             -cCC---CCCCcEEEEcC-CchHHHHHHHHHHH------------cCCCCceeecccHHHHhcC
Q 017338          318 -EGI---SLEKPVVTACG-TGVTACILALGLNR------------LGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       318 -~gi---~~~~~IvvyC~-~G~ra~~a~~~L~~------------~G~~~v~~~~GG~~~W~~~  364 (373)
                       .+.   ....-+||||. +-.|...+|..|+.            +-|..+++|+||+.+|-..
T Consensus       213 ~~~~~~~~~~~i~IFhCefSq~RGP~mA~~lr~iDR~r~~~~yp~l~ypE~yiL~gGYk~ff~~  276 (325)
T KOG3772|consen  213 KDGVPSGSKRVILIFHCEFSQERGPKMARHLRNIDRDRNSNDYPKLSYPELYILDGGYKEFFSN  276 (325)
T ss_pred             ccccccccCceeEEEEeeeccccCHHHHHHHHHhhhhhhcccCcccccchheeecccHHHHHHh
Confidence             011   12356899994 45566666666662            5677899999999999765

>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional

Probab=98.79  E-value=1e-08  Score=104.13  Aligned_cols=72  Identities=15%  Similarity=0.189  Sum_probs=59.3

Q ss_pred             CCeEEEEeecCCCCCCCCChhhhhhCCCcC----ceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEEcC
Q 017338           90 PDLKVLDASWYMPDEQRNPFQEYQVAHIPG----ALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG  165 (373)
Q Consensus        90 ~~~~iiDvR~~~~~~~r~~~~ey~~gHIpG----Ai~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~~~~VVvy~~  165 (373)
                      ++.+|||+|         +.++|..+||||    |+|+|+..+..                 .+..  ++++++||+||.
T Consensus       406 ~~~~lIDVR---------~~~E~~~~hI~g~~~~a~niP~~~l~~-----------------~~~~--l~~~~~iivyC~  457 (482)
T PRK01269        406 PDDVIIDIR---------SPDEQEDKPLKLEGVEVKSLPFYKLST-----------------QFGD--LDQSKTYLLYCD  457 (482)
T ss_pred             CCCEEEECC---------CHHHHhcCCCCCCCceEEECCHHHHHH-----------------HHhh--cCCCCeEEEECC
Confidence            368899996         458999999999    99999887532                 2333  357789999999


Q ss_pred             CCCchHHHHHHHHHHcCCCceEEec
Q 017338          166 KGIFSAARVWWMFRVFGHDRVWVLD  190 (373)
Q Consensus       166 ~g~~~a~ra~~~L~~~G~~~v~~L~  190 (373)
                      .|.+ |..++..|+.+||+||+++.
T Consensus       458 ~G~r-S~~aa~~L~~~G~~nv~~y~  481 (482)
T PRK01269        458 RGVM-SRLQALYLREQGFSNVKVYR  481 (482)
T ss_pred             CCHH-HHHHHHHHHHcCCccEEecC
Confidence            8875 89999999999999999875

>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]

Probab=98.44  E-value=2.1e-07  Score=87.54  Aligned_cols=102  Identities=23%  Similarity=0.272  Sum_probs=77.8

Q ss_pred             CCcccHHHHHHhcCC-CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           75 EPVVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        75 ~~~is~~~l~~~l~~-~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      .--||+.+.++.+++ ...++||||         |.-+|+..|+|+|+|||+.++.....            + .++..-
T Consensus       316 ~~Rvsv~d~k~il~~~~~h~llDvR---------p~~~~eI~~lP~avNIPL~~l~~~~~------------~-~~~~~~  373 (427)
T KOG2017|consen  316 DERVSVTDYKRILDSGAKHLLLDVR---------PSHEYEICRLPEAVNIPLKELRSRSG------------K-KLQGDL  373 (427)
T ss_pred             hhcccHHHHHHHHhcCCCeEEEecc---------CcceEEEEecccccccchhhhhhhhh------------h-hhcccc
Confidence            456999999999987 568999997         66899999999999999998765321            1 111112


Q ss_pred             CCCCCeEEEEcCCCCchHHHHHHHHHHcCCC-ceEEecCCHHHHHhC
Q 017338          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHD-RVWVLDGGLPRWRAS  199 (373)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~-~v~~L~GG~~~W~~~  199 (373)
                      -+...+|+|.|..|.. +.++.|.|+...++ +|+-+-||+.+|...
T Consensus       374 ~~~~~~I~ViCrrGNd-SQ~Av~~Lre~~~~~~vrDvigGl~~w~~~  419 (427)
T KOG2017|consen  374 NTESKDIFVICRRGND-SQRAVRILREKFPDSSVRDVIGGLKAWAAK  419 (427)
T ss_pred             cccCCCEEEEeCCCCc-hHHHHHHHHhhCCchhhhhhhhHHHHHHHh
Confidence            2345669999998886 89999999976654 566677999999764

>COG5105 MIH1 Mitotic inducer, protein phosphatase [Cell division and chromosome partitioning]

Probab=98.22  E-value=2.9e-06  Score=78.91  Aligned_cols=99  Identities=19%  Similarity=0.217  Sum_probs=75.7

Q ss_pred             CCcccHHHHHHhcCCC------CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHH
Q 017338           75 EPVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA  148 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~------~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~  148 (373)
                      -+.||++.|+..++..      +.+|||||        -+ -||..|||-.||||.-..                ++.-.
T Consensus       241 ~~RIs~etlk~vl~g~~~~~f~kCiIIDCR--------Fe-YEY~GGHIinaVNi~s~~----------------~l~~~  295 (427)
T COG5105         241 IQRISVETLKQVLEGMYNIDFLKCIIIDCR--------FE-YEYRGGHIINAVNISSTK----------------KLGLL  295 (427)
T ss_pred             hhhcCHHHHHHHHhchhhhhhhceeEEeec--------ce-eeecCceeeeeeecchHH----------------HHHHH
Confidence            4679999999988752      46799997        23 689999999999997654                33334


Q ss_pred             HHHcCCCCCCeEEEEcCCCCchHHHHHHHHHHcC------------CCceEEecCCHHHHHh
Q 017338          149 VSALGLENKDGLVVYDGKGIFSAARVWWMFRVFG------------HDRVWVLDGGLPRWRA  198 (373)
Q Consensus       149 l~~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G------------~~~v~~L~GG~~~W~~  198 (373)
                      +.........-+|+.|+....++.+++..|+-.-            |..|++|+||+.+.-.
T Consensus       296 F~hkplThp~aLifHCEfSshRaP~LA~HlRN~DR~~N~dhYP~L~yPevyIl~GGYk~fy~  357 (427)
T COG5105         296 FRHKPLTHPRALIFHCEFSSHRAPRLAQHLRNMDRMKNPDHYPLLTYPEVYILEGGYKKFYS  357 (427)
T ss_pred             HHhccccCceeEEEEeecccccchhHHHHHhhhhhhcCcccCcccccceEEEecCcHHHHhh
Confidence            4444455567788999988778999999987543            3579999999988743

>COG5105 MIH1 Mitotic inducer, protein phosphatase [Cell division and chromosome partitioning]

Probab=97.73  E-value=8.2e-05  Score=69.44  Aligned_cols=97  Identities=19%  Similarity=0.323  Sum_probs=72.5

Q ss_pred             cccCHHHHHHHhhCC------CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHH
Q 017338          244 LIWTLEQVKRNIEEG------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  317 (373)
Q Consensus       244 ~~is~~el~~~~~~~------~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~  317 (373)
                      ..|+.+.+++.++..      +-+|||.|=+.||           ..|||-.|+||.-.+            +|.-.|..
T Consensus       242 ~RIs~etlk~vl~g~~~~~f~kCiIIDCRFeYEY-----------~GGHIinaVNi~s~~------------~l~~~F~h  298 (427)
T COG5105         242 QRISVETLKQVLEGMYNIDFLKCIIIDCRFEYEY-----------RGGHIINAVNISSTK------------KLGLLFRH  298 (427)
T ss_pred             hhcCHHHHHHHHhchhhhhhhceeEEeecceeee-----------cCceeeeeeecchHH------------HHHHHHHh
Confidence            468888888887632      3569999999999           789999999997543            33444443


Q ss_pred             cCCCCCCcEEEEcC-CchHHHHHHHHHHHc------------CCCCceeecccHHHHhc
Q 017338          318 EGISLEKPVVTACG-TGVTACILALGLNRL------------GKHDVAVYDGSWTEWGA  363 (373)
Q Consensus       318 ~gi~~~~~IvvyC~-~G~ra~~a~~~L~~~------------G~~~v~~~~GG~~~W~~  363 (373)
                      .-+..-.-+|++|. +..|+..+|..|+.+            -|..|++++||+...-.
T Consensus       299 kplThp~aLifHCEfSshRaP~LA~HlRN~DR~~N~dhYP~L~yPevyIl~GGYk~fy~  357 (427)
T COG5105         299 KPLTHPRALIFHCEFSSHRAPRLAQHLRNMDRMKNPDHYPLLTYPEVYILEGGYKKFYS  357 (427)
T ss_pred             ccccCceeEEEEeecccccchhHHHHHhhhhhhcCcccCcccccceEEEecCcHHHHhh
Confidence            33555567999995 678999999888642            45689999999987644

>KOG1717 consensus Dual specificity phosphatase [Defense mechanisms]

Probab=96.44  E-value=0.0019  Score=59.23  Aligned_cols=106  Identities=21%  Similarity=0.296  Sum_probs=68.3

Q ss_pred             cccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCccccccc-----CCCCCCCCCCHHHHHHHHHH
Q 017338           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR-----TTNLPHMLPSEEAFAAAVSA  151 (373)
Q Consensus        77 ~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~-----~~~~~~~l~~~e~~~~~l~~  151 (373)
                      -+|++||.+.+..++++++|+|         +    +..||.+|+++-+..+...     .-.+...+|........-.+
T Consensus         5 ~~s~~wlnr~l~~~nllllDCR---------s----es~~i~~A~~valPalmlrrl~~g~l~~ra~~p~~~d~~~~~~~   71 (343)
T KOG1717|consen    5 SKSVAWLNRQLELGNLLLLDCR---------S----ESSHIESAINVALPALMLRRLTGGNLPVRALFPRSCDDKRFPAR   71 (343)
T ss_pred             HHHHHHHHhhcccCceEEEecC---------C----ccchhhhhhhhcchHHHHHHHhCCCCcceeccCCcccccccccc
Confidence            4789999999999899999997         3    4789999999987764332     22333445543322211001


Q ss_pred             cCCCCCCeEEEEcCCCC-----chHHHHH----HHHHHcCCCceEEecCCHHHHHhC
Q 017338          152 LGLENKDGLVVYDGKGI-----FSAARVW----WMFRVFGHDRVWVLDGGLPRWRAS  199 (373)
Q Consensus       152 ~gi~~~~~VVvy~~~g~-----~~a~ra~----~~L~~~G~~~v~~L~GG~~~W~~~  199 (373)
                         -+..+||.||....     ..++++.    ..++..|. .++.|.|||..++++
T Consensus        72 ---c~~v~vilyD~~~~e~e~~~~~~s~Lg~ll~kl~~~g~-~a~yL~ggF~~fq~e  124 (343)
T KOG1717|consen   72 ---CGTVTVILYDESSAEWEEETGAESVLGLLLKKLKDEGC-SARYLSGGFSKFQAE  124 (343)
T ss_pred             ---CCcceeeecccccccccccchhhhHHHHHHHHHHhcCc-chhhhhcccchhhhh
Confidence               13367899987411     1123322    34566776 689999999998765

>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function

Probab=96.29  E-value=0.023  Score=45.90  Aligned_cols=85  Identities=20%  Similarity=0.311  Sum_probs=39.5

Q ss_pred             cCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCC----CCCcccCCCCcccCcccccccCCCCCCH---HHHHHHHHHc
Q 017338          246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRK----GIRSGHVPGSKCIPFPQMLDASQTLLPA---DELKKRFEQE  318 (373)
Q Consensus       246 is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~----~~~~GhIpGA~~ip~~~l~~~~~~~~~~---~~l~~~~~~~  318 (373)
                      ++.+++.+..+.+=-.||+.|+..|=.+. +....    ....| + .-+|+|+..     +. .+.   +.+.+.+.+ 
T Consensus        15 ~~~~d~~~la~~GfktVInlRpd~E~~~q-p~~~~~~~~a~~~G-l-~y~~iPv~~-----~~-~~~~~v~~f~~~l~~-   84 (110)
T PF04273_consen   15 PSPEDLAQLAAQGFKTVINLRPDGEEPGQ-PSSAEEAAAAEALG-L-QYVHIPVDG-----GA-ITEEDVEAFADALES-   84 (110)
T ss_dssp             --HHHHHHHHHCT--EEEE-S-TTSTTT--T-HHCHHHHHHHCT---EEEE----T-----TT---HHHHHHHHHHHHT-
T ss_pred             CCHHHHHHHHHCCCcEEEECCCCCCCCCC-CCHHHHHHHHHHcC-C-eEEEeecCC-----CC-CCHHHHHHHHHHHHh-
Confidence            57888888777655679999987663211 00000    00000 0 123444432     11 222   445555553 


Q ss_pred             CCCCCCcEEEEcCCchHHHHHHHHH
Q 017338          319 GISLEKPVVTACGTGVTACILALGL  343 (373)
Q Consensus       319 gi~~~~~IvvyC~~G~ra~~a~~~L  343 (373)
                         ..+||.+||.+|.||..+|.+-
T Consensus        85 ---~~~Pvl~hC~sG~Ra~~l~~l~  106 (110)
T PF04273_consen   85 ---LPKPVLAHCRSGTRASALWALA  106 (110)
T ss_dssp             ---TTTSEEEE-SCSHHHHHHHHHH
T ss_pred             ---CCCCEEEECCCChhHHHHHHHH
Confidence               2479999999999998766543

; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.

>COG2603 Predicted ATPase [General function prediction only]

Probab=96.28  E-value=0.0089  Score=55.67  Aligned_cols=134  Identities=15%  Similarity=0.175  Sum_probs=80.0

Q ss_pred             CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCccccccc----CCCCCCCCCCHHH--------------HHHHHHHc
Q 017338           91 DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR----TTNLPHMLPSEEA--------------FAAAVSAL  152 (373)
Q Consensus        91 ~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~----~~~~~~~l~~~e~--------------~~~~l~~~  152 (373)
                      +.-+||||        .| -+|..||.|+++|+|.-.=...    +....++.+....              ++.+... 
T Consensus        15 ~~~lid~r--------ap-~ef~~g~~~ia~nl~~~ndder~~Igt~yKk~~~~~a~alg~~~vcG~i~~~~l~ask~f-   84 (334)
T COG2603          15 DTPLIDVR--------AP-IEFENGAMPIAINLPLMNDDERQEIGTCYKKQGQDAAKALGHALVCGEIRQQRLEASKAF-   84 (334)
T ss_pred             CCceeecc--------ch-HHHhcccchhhhccccccchHHHHHHHHHhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHH-
Confidence            68899996        45 8999999999999997431110    0011111111111              1111111 


Q ss_pred             CCCCCCeEEEEcCCCCchHHHHHHHH-HHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcCccc
Q 017338          153 GLENKDGLVVYDGKGIFSAARVWWMF-RVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVV  231 (373)
Q Consensus       153 gi~~~~~VVvy~~~g~~~a~ra~~~L-~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (373)
                        ..+.++-++|..|+.++......| +..|++ +--+-||+.+.+.                                 
T Consensus        85 --~e~~~~Gi~c~rgg~rsk~v~~~l~~~~g~~-~~r~iGGeKalrt---------------------------------  128 (334)
T COG2603          85 --QEENPVGILCARGGLRSKIVQKWLGYAAGID-YPRVIGGEKALRT---------------------------------  128 (334)
T ss_pred             --HHhCCcceeeccccchhHHHHHHHHHHHHhh-hhhhhchHHHHHH---------------------------------
Confidence              123456666877766666666666 777774 4455677766431                                 


Q ss_pred             CCcceeeccCCccccCHHHHHHHhhCCCcEEEE-ecCCCccCCCCCCCCCCCCcccCCCCcccCc
Q 017338          232 GPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVD-ARSKARFDGDAPEPRKGIRSGHVPGSKCIPF  295 (373)
Q Consensus       232 ~~~~~~~~~~~~~~is~~el~~~~~~~~~~iID-vR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~  295 (373)
                                    ....+..+.+..+.+++++ ++....+           .....|+|+|++-
T Consensus       129 --------------~~~~a~~~~i~~k~~il~g~Tgcgkt~-----------lve~lp~aidlE~  168 (334)
T COG2603         129 --------------FAIQATIKEIAQKDFILCGCTGCGKTE-----------LVEQLPNAIDLEG  168 (334)
T ss_pred             --------------HHHHHHHHHhccCCEEEeCCCCCcHHH-----------HHHhCCCccCcHh
Confidence                          1234455566667888999 7777666           5778899999884

>TIGR01244 conserved hypothetical protein TIGR01244

Probab=95.95  E-value=0.048  Score=45.71  Aligned_cols=94  Identities=13%  Similarity=0.165  Sum_probs=49.2

Q ss_pred             cCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCC--cccCcccccccCCCC--CCHHHHHHHHHHcCCC
Q 017338          246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGS--KCIPFPQMLDASQTL--LPADELKKRFEQEGIS  321 (373)
Q Consensus       246 is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA--~~ip~~~l~~~~~~~--~~~~~l~~~~~~~gi~  321 (373)
                      ++.+++..+.+.+=-.|||.|+..|-.+...... ......-+|-  +++|+..     +.+  ...+.+.+.+.    .
T Consensus        15 lt~~d~~~L~~~GiktVIdlR~~~E~~~~p~~~~-~~~~a~~~gl~y~~iPv~~-----~~~~~~~v~~f~~~~~----~   84 (135)
T TIGR01244        15 LTKADAAQAAQLGFKTVINNRPDREEESQPDFAQ-IKAAAEAAGVTYHHQPVTA-----GDITPDDVETFRAAIG----A   84 (135)
T ss_pred             CCHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHH-HHHHHHHCCCeEEEeecCC-----CCCCHHHHHHHHHHHH----h
Confidence            4567776654444467999999877533210000 0000000121  2344321     111  12344555554    2


Q ss_pred             CCCcEEEEcCCchHHHHHHHHH-HHcCCC
Q 017338          322 LEKPVVTACGTGVTACILALGL-NRLGKH  349 (373)
Q Consensus       322 ~~~~IvvyC~~G~ra~~a~~~L-~~~G~~  349 (373)
                      .++||++||.+|.|+..+|.++ ...|..
T Consensus        85 ~~~pvL~HC~sG~Rt~~l~al~~~~~g~~  113 (135)
T TIGR01244        85 AEGPVLAYCRSGTRSSLLWGFRQAAEGVP  113 (135)
T ss_pred             CCCCEEEEcCCChHHHHHHHHHHHHcCCC
Confidence            3589999999999988776543 335654

No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.

>COG2603 Predicted ATPase [General function prediction only]

Probab=93.55  E-value=0.095  Score=49.02  Aligned_cols=92  Identities=22%  Similarity=0.297  Sum_probs=56.3

Q ss_pred             CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccc------cCCC-CCCH----------HHHH-HHHHH-c
Q 017338          258 GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLD------ASQT-LLPA----------DELK-KRFEQ-E  318 (373)
Q Consensus       258 ~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~------~~~~-~~~~----------~~l~-~~~~~-~  318 (373)
                      .+..+||||.+.||           ..||.|+++|+|...-..      ..+. ..+.          .++. .++.. .
T Consensus        14 ~~~~lid~rap~ef-----------~~g~~~ia~nl~~~ndder~~Igt~yKk~~~~~a~alg~~~vcG~i~~~~l~ask   82 (334)
T COG2603          14 ADTPLIDVRAPIEF-----------ENGAMPIAINLPLMNDDERQEIGTCYKKQGQDAAKALGHALVCGEIRQQRLEASK   82 (334)
T ss_pred             cCCceeeccchHHH-----------hcccchhhhccccccchHHHHHHHHHhhcCcHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            36789999999999           899999999999643211      0000 0000          1111 11110 0


Q ss_pred             CCCCCCcEEEEcC-CchHHHHHHHHH-HHcCCCCceeecccHHHH
Q 017338          319 GISLEKPVVTACG-TGVTACILALGL-NRLGKHDVAVYDGSWTEW  361 (373)
Q Consensus       319 gi~~~~~IvvyC~-~G~ra~~a~~~L-~~~G~~~v~~~~GG~~~W  361 (373)
                      ....+.++-++|. +|.|+-..+..| ...|.+ +--..||+.+.
T Consensus        83 ~f~e~~~~Gi~c~rgg~rsk~v~~~l~~~~g~~-~~r~iGGeKal  126 (334)
T COG2603          83 AFQEENPVGILCARGGLRSKIVQKWLGYAAGID-YPRVIGGEKAL  126 (334)
T ss_pred             HHHHhCCcceeeccccchhHHHHHHHHHHHHhh-hhhhhchHHHH
Confidence            1223567777794 567898888888 567875 44456887654

>KOG3636 consensus Uncharacterized conserved protein, contains TBC and Rhodanese domains [General function prediction only]

Probab=91.20  E-value=0.78  Score=45.42  Aligned_cols=100  Identities=27%  Similarity=0.333  Sum_probs=63.5

Q ss_pred             ccHHHHHHhcC--CC--CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHc-
Q 017338           78 VSVDWLHANLR--EP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL-  152 (373)
Q Consensus        78 is~~~l~~~l~--~~--~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~-  152 (373)
                      |++-+|.++-+  .+  +..|||+|         |.+.|.+||+-.|.|++-.-          |+-.+++|+..+..+ 
T Consensus       309 isv~el~~~~~~~~~~VrFFiVDcR---------paeqynaGHlstaFhlDc~l----------mlqeP~~Fa~av~sLl  369 (669)
T KOG3636|consen  309 ISVIELTSHDEISSGSVRFFIVDCR---------PAEQYNAGHLSTAFHLDCVL----------MLQEPEKFAIAVNSLL  369 (669)
T ss_pred             hhHHHhhcccccccCceEEEEEecc---------chhhcccccchhhhcccHHH----------HhcCHHHHHHHHHHHH
Confidence            66666654332  22  36799997         78999999999999998764          344677888765543 


Q ss_pred             -----CCCCC-----CeEEEEcCCCCc----hHHHHHHHHHHcCCCceEEecCCHHHHH
Q 017338          153 -----GLENK-----DGLVVYDGKGIF----SAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (373)
Q Consensus       153 -----gi~~~-----~~VVvy~~~g~~----~a~ra~~~L~~~G~~~v~~L~GG~~~W~  197 (373)
                           .|..+     ..+.+. +.|..    ..-++..++-.-+-.-|.++.||+.+..
T Consensus       370 ~aqrqtie~~s~aggeHlcfm-GsGr~EED~YmnMviA~FlQKnk~yVS~~~GGy~~lh  427 (669)
T KOG3636|consen  370 CAQRQTIERDSNAGGEHLCFM-GSGRDEEDNYMNMVIAMFLQKNKLYVSFVQGGYKKLH  427 (669)
T ss_pred             HHHHHhhhccccCCcceEEEe-ccCcchHHHHHHHHHHHHHhcCceEEEEecchHHHHH
Confidence                 23322     344443 22211    1334444555556557899999998875

>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=90.98  E-value=1.1  Score=36.42  Aligned_cols=86  Identities=15%  Similarity=0.195  Sum_probs=47.4

Q ss_pred             cCHHHHHHHhhCCCcEEEEecCCCccCCCCCCC-------CCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHc
Q 017338          246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEP-------RKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQE  318 (373)
Q Consensus       246 is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~-------~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~  318 (373)
                      ++++++.+....+=..||-.|+..|=.|.-..-       ..+....|||      ..--   .-+--+.+.+++.+.+ 
T Consensus        16 i~~~D~~~iaa~GFksiI~nRPDgEe~~QP~~~~i~~aa~~aGl~y~~iP------V~~~---~iT~~dV~~f~~Al~e-   85 (130)
T COG3453          16 ISPADIASIAALGFKSIICNRPDGEEPGQPGFAAIAAAAEAAGLTYTHIP------VTGG---GITEADVEAFQRALDE-   85 (130)
T ss_pred             CCHHHHHHHHHhccceecccCCCCCCCCCCChHHHHHHHHhcCCceEEee------cCCC---CCCHHHHHHHHHHHHH-
Confidence            567787766554445689999876643321000       0111223333      2110   0000123555566654 


Q ss_pred             CCCCCCcEEEEcCCchHHHHHHHHHH
Q 017338          319 GISLEKPVVTACGTGVTACILALGLN  344 (373)
Q Consensus       319 gi~~~~~IvvyC~~G~ra~~a~~~L~  344 (373)
                         .+.||..||++|.||..+|..-+
T Consensus        86 ---aegPVlayCrsGtRs~~ly~~~~  108 (130)
T COG3453          86 ---AEGPVLAYCRSGTRSLNLYGLGE  108 (130)
T ss_pred             ---hCCCEEeeecCCchHHHHHHHHH
Confidence               35799999999999998776544

>KOG0814 consensus Glyoxylase [General function prediction only]

Probab=89.50  E-value=0.14  Score=44.37  Aligned_cols=56  Identities=13%  Similarity=0.193  Sum_probs=40.5

Q ss_pred             hhhhccCcccc-----ccCchhhhhhhhccccccCCCCcc-------cccccCCCcchhhh-hhhhcccccC
Q 017338            7 TRRLVHSSFSI-----SYKPQVFTSLLNKKLFYSRPKHTH-------TTLKTSSSQSPCVM-SSLAAGRRAD   65 (373)
Q Consensus         7 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~   65 (373)
                      .+.+-+|..++     ||||+.+||+.+++.+|||+.-.-       .|++++   -|++. .++++++..+
T Consensus       166 ~kIFTLP~d~~iYpaHdY~G~~~stV~EEk~~NPRLTk~~eeFv~IM~NLnL~---yPk~Id~aVpanm~~g  234 (237)
T KOG0814|consen  166 SKIFTLPEDYLIYPAHDYKGFLVSTVWEEKNLNPRLTKSKEEFVKIMKNLNLP---YPKQIDKAVPANMVCG  234 (237)
T ss_pred             HHheeCCCceEEeeccccCceEeeehhhhhccCcccccCHHHHHHHHHhcCCC---ChhhhCcccchhhccc
Confidence            34566787776     999999999999999999996543       555555   55555 5555555543

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=89.42  E-value=0.071  Score=54.06  Aligned_cols=96  Identities=19%  Similarity=0.144  Sum_probs=63.2

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 017338           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi  154 (373)
                      -+-||++++..+   +.+.++|.|         ...+|..+|+++++|+|+. +.+..-         +.|. .+....-
T Consensus       621 ~prmsAedl~~~---~~l~v~d~r---------~~~ef~r~~~s~s~nip~~-~~ea~l---------~~~~-~l~~~~~  677 (725)
T KOG1093|consen  621 CPRISAEDLIWL---KMLYVLDTR---------QESEFQREHFSDSINIPFN-NHEADL---------DWLR-FLPGIVC  677 (725)
T ss_pred             CccccHHHHHHH---HHHHHHhHH---------HHHHHHHhhccccccCCcc-chHHHH---------HHhh-cchHhHH
Confidence            466888888766   468899996         4589999999999999998 222100         0010 1111112


Q ss_pred             CCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHH
Q 017338          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP  194 (373)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~  194 (373)
                      .....+|++.. +...+++....+..+-+.++.++++|++
T Consensus       678 ~~~~~~v~~~~-~~K~~~e~~~~~~~mk~p~~cil~~~~~  716 (725)
T KOG1093|consen  678 SEGKKCVVVGK-NDKHAAERLTELYVMKVPRICILHDGFN  716 (725)
T ss_pred             hhCCeEEEecc-chHHHHHHhhHHHHhcccHHHHHHHHHh
Confidence            24566777755 3334677667777777888889999987

>TIGR01244 conserved hypothetical protein TIGR01244

Probab=87.67  E-value=3.3  Score=34.56  Aligned_cols=53  Identities=26%  Similarity=0.389  Sum_probs=30.3

Q ss_pred             HHHHHHHHHcCCCCCCeEEEEcCCCCchHHHHHH-HHHHcCCCceEEecCCHHHHHhCCCCcc
Q 017338          143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWW-MFRVFGHDRVWVLDGGLPRWRASGYDVE  204 (373)
Q Consensus       143 e~~~~~l~~~gi~~~~~VVvy~~~g~~~a~ra~~-~L~~~G~~~v~~L~GG~~~W~~~g~pv~  204 (373)
                      +.|.+.+..    .+.+|++||..|.+ +..+|. .+...|.+.-.++.    .=++.|+.++
T Consensus        76 ~~f~~~~~~----~~~pvL~HC~sG~R-t~~l~al~~~~~g~~~~~i~~----~~~~~G~~~~  129 (135)
T TIGR01244        76 ETFRAAIGA----AEGPVLAYCRSGTR-SSLLWGFRQAAEGVPVEEIVR----RAQAAGYDLS  129 (135)
T ss_pred             HHHHHHHHh----CCCCEEEEcCCChH-HHHHHHHHHHHcCCCHHHHHH----HHHHcCCCcc
Confidence            345555542    35889999999884 555443 33445664322332    2355666665

No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.

>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function

Probab=86.35  E-value=2.6  Score=33.96  Aligned_cols=85  Identities=22%  Similarity=0.199  Sum_probs=36.8

Q ss_pred             cccHHHHHHhcCCCCeEEEEeecCCCCCCCC--Chh----hhhhCCCcCceecCcccccccCCCCCCCCCCHHH---HHH
Q 017338           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRN--PFQ----EYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEA---FAA  147 (373)
Q Consensus        77 ~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~--~~~----ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~---~~~  147 (373)
                      .++++++.++.+.+=-.||+.|   |+.+..  |..    +-...+==.-+|+|+..          .-++.+.   |.+
T Consensus        14 Q~~~~d~~~la~~GfktVInlR---pd~E~~~qp~~~~~~~~a~~~Gl~y~~iPv~~----------~~~~~~~v~~f~~   80 (110)
T PF04273_consen   14 QPSPEDLAQLAAQGFKTVINLR---PDGEEPGQPSSAEEAAAAEALGLQYVHIPVDG----------GAITEEDVEAFAD   80 (110)
T ss_dssp             S--HHHHHHHHHCT--EEEE-S----TTSTTT-T-HHCHHHHHHHCT-EEEE----T----------TT--HHHHHHHHH
T ss_pred             CCCHHHHHHHHHCCCcEEEECC---CCCCCCCCCCHHHHHHHHHHcCCeEEEeecCC----------CCCCHHHHHHHHH
Confidence            4899999987766335799998   211100  000    00001101235666653          1134444   444


Q ss_pred             HHHHcCCCCCCeEEEEcCCCCchHHHHHHHHHH
Q 017338          148 AVSALGLENKDGLVVYDGKGIFSAARVWWMFRV  180 (373)
Q Consensus       148 ~l~~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~  180 (373)
                      .|..+    ..+|++||..|.+ +..+ |.|..
T Consensus        81 ~l~~~----~~Pvl~hC~sG~R-a~~l-~~l~~  107 (110)
T PF04273_consen   81 ALESL----PKPVLAHCRSGTR-ASAL-WALAQ  107 (110)
T ss_dssp             HHHTT----TTSEEEE-SCSHH-HHHH-HHHHH
T ss_pred             HHHhC----CCCEEEECCCChh-HHHH-HHHHh
Confidence            55443    4689999998875 5544 44543

; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=84.53  E-value=0.21  Score=50.88  Aligned_cols=94  Identities=19%  Similarity=0.171  Sum_probs=58.2

Q ss_pred             ccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCC--CC
Q 017338          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI--SL  322 (373)
Q Consensus       245 ~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi--~~  322 (373)
                      .++.+++...   +...++|.|...||           +.+|+++++|+|+. +.+.        +++...--.++  ..
T Consensus       623 rmsAedl~~~---~~l~v~d~r~~~ef-----------~r~~~s~s~nip~~-~~ea--------~l~~~~~l~~~~~~~  679 (725)
T KOG1093|consen  623 RISAEDLIWL---KMLYVLDTRQESEF-----------QREHFSDSINIPFN-NHEA--------DLDWLRFLPGIVCSE  679 (725)
T ss_pred             cccHHHHHHH---HHHHHHhHHHHHHH-----------HHhhccccccCCcc-chHH--------HHHHhhcchHhHHhh
Confidence            4666666655   35789999999999           89999999999998 2221        11111100011  12


Q ss_pred             CCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHH
Q 017338          323 EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW  361 (373)
Q Consensus       323 ~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W  361 (373)
                      .+.++++....--++.....+..+-+..+.++++|+...
T Consensus       680 ~~~~v~~~~~~K~~~e~~~~~~~mk~p~~cil~~~~~~~  718 (725)
T KOG1093|consen  680 GKKCVVVGKNDKHAAERLTELYVMKVPRICILHDGFNNI  718 (725)
T ss_pred             CCeEEEeccchHHHHHHhhHHHHhcccHHHHHHHHHhhc
Confidence            345555554433455444455555577888999998843

>smart00195 DSPc Dual specificity phosphatase, catalytic domain

Probab=83.42  E-value=3.2  Score=34.26  Aligned_cols=30  Identities=17%  Similarity=0.197  Sum_probs=21.4

Q ss_pred             CCCCCcEEEEcCCch-HHHH--HHHHHHHcCCC
Q 017338          320 ISLEKPVVTACGTGV-TACI--LALGLNRLGKH  349 (373)
Q Consensus       320 i~~~~~IvvyC~~G~-ra~~--a~~~L~~~G~~  349 (373)
                      +..+++|+|+|..|. ||..  +++.+...|++
T Consensus        75 ~~~~~~VlVHC~~G~~RS~~v~~~yl~~~~~~~  107 (138)
T smart00195       75 EKKGGKVLVHCQAGVSRSATLIIAYLMKYRNLS  107 (138)
T ss_pred             hcCCCeEEEECCCCCchHHHHHHHHHHHHhCCC
Confidence            567789999999986 6653  44456667764

>PLN02727 NAD kinase

Probab=80.36  E-value=6.7  Score=42.80  Aligned_cols=84  Identities=26%  Similarity=0.223  Sum_probs=43.8

Q ss_pred             ccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCC---CCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCC
Q 017338          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPR---KGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  321 (373)
Q Consensus       245 ~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~---~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~  321 (373)
                      -++++++....+.+=-.||+.|+..|-.+  +...   ...+..-| .-+|+|...     ...++.+++++..+...-.
T Consensus       268 Qpspe~la~LA~~GfKTIINLRpd~E~~q--~~~~ee~eAae~~GL-~yVhIPVs~-----~~apt~EqVe~fa~~l~~s  339 (986)
T PLN02727        268 QVTEEGLKWLLEKGFKTIVDLRAEIVKDN--FYQAAVDDAISSGKI-EVVKIPVEV-----RTAPSAEQVEKFASLVSDS  339 (986)
T ss_pred             CCCHHHHHHHHHCCCeEEEECCCCCcCCC--chhHHHHHHHHHcCC-eEEEeecCC-----CCCCCHHHHHHHHHHHHhh
Confidence            35788887776654456999999776211  1100   00000111 123444421     1223445555544432113


Q ss_pred             CCCcEEEEcCCchHH
Q 017338          322 LEKPVVTACGTGVTA  336 (373)
Q Consensus       322 ~~~~IvvyC~~G~ra  336 (373)
                      ..+||++||.+|.+.
T Consensus       340 lpkPVLvHCKSGarR  354 (986)
T PLN02727        340 SKKPIYLHSKEGVWR  354 (986)
T ss_pred             cCCCEEEECCCCCch
Confidence            478999999999943

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	373
3olh_A	302	Human 3-Mercaptopyruvate Sulfurtransferase Length =		1e-60
1urh_A	280	The "rhodanese" Fold And Catalytic Mechanism Of 3-M		4e-56
1orb_A	296	Active Site Structural Features For Chemically Modi		8e-54
1boh_A	296	Sulfur-Substituted Rhodanese (Orthorhombic Form) Le		1e-52
1rhs_A	296	Sulfur-Substituted Rhodanese Length = 296		1e-52
1dp2_A	293	Crystal Structure Of The Complex Between Rhodanese		2e-52
1rhd_A	293	Structure Of Bovine Liver Rhodanese. I. Structure D		4e-52
3utn_X	327	Crystal Structure Of Tum1 Protein From Saccharomyce		3e-39
1uar_A	285	Crystal Structure Of Rhodanese From Thermus Thermop		4e-23
3hwi_A	298	Crystal Structure Of Probable Thiosulfate Sulfurtra		1e-21
3aax_A	277	Crystal Structure Of Probable Thiosulfate Sulfurtra		2e-21
3aay_A	277	Crystal Structure Of Probable Thiosulfate Sulfurtra		3e-20
1h4k_X	271	Sulfurtransferase From Azotobacter Vinelandii In Co		1e-19
1e0c_A	271	Sulfurtransferase From Azotobacter Vinelandii Lengt		3e-18
3ipp_A	416	Crystal Structure Of Sulfur-Free Ynje Length = 416		2e-17
3hzu_A	318	Crystal Structure Of Probable Thiosulfate Sulfurtra		2e-17
3ipo_A	416	Crystal Structure Of Ynje Length = 416		4e-16
2wlx_A	423	Putative Thiosulfate Sulfurtransferase Ynje Length		4e-16
3p3a_A	320	Crystal Structure Of A Putative Thiosulfate Sulfurt		2e-15
2wlr_A	423	Putative Thiosulfate Sulfurtransferase Ynje Length		1e-13
1okg_A	373	3-Mercaptopyruvate Sulfurtransferase From Leishmani		2e-09

>pdb|3OLH|A Chain A, Human 3-Mercaptopyruvate Sulfurtransferase Length = 302

Iteration: 1
 Score =  229 bits (585), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 120/291 (41%), Positives = 161/291 (55%), Gaps = 27/291 (9%)
Query: 77  VVSVDWLHANLREPD----LKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  W+   LR P     L++LDASWY+P   R+  +E++  HIPGA FFD+D  +DRT
Sbjct: 23  MVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRT 82
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
           +   HMLP  E FA     LG+     +V+YD   +G++SA RVWWMFR FGH  V +LD
Sbjct: 83  SPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLD 142
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GGL  W      + S  S  A                     P  F+ +  P  I T E 
Sbjct: 143 GGLRHWLRQNLPLSSGKSQPA---------------------PAEFRAQLDPAFIKTYED 181
Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 310
           +K N+E   +Q+VD+R+  RF G  PEPR GI  GH+PG+  IPF   L         +E
Sbjct: 182 IKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEE 241
Query: 311 LKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 361
           ++  F+++ + L KP+V  CG+GVTAC +ALG    GK DV +YDGSW EW
Sbjct: 242 IRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEW 292

>pdb|1URH|A Chain A, The "rhodanese" Fold And Catalytic Mechanism Of 3-Mercaptopyruvate Sulfotransferases: Crystal Structure Of Ssea From Escherichia Coli Length = 280

Iteration: 1
 Score =  215 bits (547), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 114/294 (38%), Positives = 165/294 (56%), Gaps = 23/294 (7%)
Query: 78  VSVDWLHANLREPDLKVLDASWYMP-DEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           V  DWL  ++ +P+++++DA    P  E RN  QEY   HIPGA+FFD++ ++D T+ LP
Sbjct: 6   VGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLP 65
Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
           HMLP  E FA A+  LG+     L+VYD   +FSA R WWM R FG ++V +L GGL  W
Sbjct: 66  HMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGW 125
Query: 197 RASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIE 256
           +            D +L    A E  E            F   F P  +  +  V     
Sbjct: 126 QR-----------DDLLLEEGAVELPEG----------EFNAAFNPEAVVKVTDVLLASH 164
Query: 257 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE 316
           E T Q++DAR  ARF+ +  EPR G+R GH+PG+  +P+ +++   + L   DEL   F 
Sbjct: 165 ENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGE-LKTTDELDAIFF 223
Query: 317 QEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE 370
             G+S +KP++ + G+GVTA ++ L L  L   +V +YDG+W+EWGA+ D PVE
Sbjct: 224 GRGVSYDKPIIVSXGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVE 277

>pdb|1ORB|A Chain A, Active Site Structural Features For Chemically Modified Forms Of Rhodanese Length = 296

Iteration: 1
 Score =  207 bits (527), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 121/292 (41%), Positives = 155/292 (53%), Gaps = 29/292 (9%)
Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 128 GGFRNWLKEGHPVTSEPSRPE---------------------PAIFKATLNRSLLKTYEQ 166
Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           V  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 167 VLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPE 226
Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 361
           EL+  FE + + L KP++  C  GVTAC +AL     GK DVA+YDGSW EW
Sbjct: 227 ELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEW 278

>pdb|1BOH|A Chain A, Sulfur-Substituted Rhodanese (Orthorhombic Form) Length = 296

Iteration: 1
 Score =  203 bits (516), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 120/292 (41%), Positives = 154/292 (52%), Gaps = 29/292 (9%)
Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 128 GGFRNWLKEGHPVTSEPSRPE---------------------PAIFKATLNRSLLKTYEQ 166
Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           V  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 167 VLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPE 226
Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 361
           EL+  FE + + L KP++     GVTAC +AL     GK DVA+YDGSW EW
Sbjct: 227 ELRAMFEAKKVDLTKPLIATXRKGVTACHIALAAYLCGKPDVAIYDGSWFEW 278

>pdb|1RHS|A Chain A, Sulfur-Substituted Rhodanese Length = 296

Iteration: 1
 Score =  203 bits (516), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 120/292 (41%), Positives = 154/292 (52%), Gaps = 29/292 (9%)
Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 128 GGFRNWLKEGHPVTSEPSRPE---------------------PAIFKATLNRSLLKTYEQ 166
Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           V  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 167 VLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPE 226
Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 361
           EL+  FE + + L KP++     GVTAC +AL     GK DVA+YDGSW EW
Sbjct: 227 ELRAMFEAKKVDLTKPLIATXRKGVTACHIALAAYLCGKPDVAIYDGSWFEW 278

>pdb|1DP2|A Chain A, Crystal Structure Of The Complex Between Rhodanese And Lipoate Length = 293

Iteration: 1
 Score =  202 bits (515), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/292 (41%), Positives = 154/292 (52%), Gaps = 29/292 (9%)
Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 128 GGFRNWLKEGHPVTSEPSRPE---------------------PAIFKATLNRSLLKTYEQ 166
Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           V  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 167 VLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPE 226
Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 361
           EL+  FE + + L KP++     GVTAC +AL     GK DVA+YDGSW EW
Sbjct: 227 ELRAMFEAKKVDLTKPLIATXRKGVTACHIALAAYLCGKPDVAIYDGSWFEW 278

>pdb|1RHD|A Chain A, Structure Of Bovine Liver Rhodanese. I. Structure Determination At 2.5 Angstroms Resolution And A Comparison Of The Conformation And Sequence Of Its Two Domains Length = 293

Iteration: 1
 Score =  201 bits (512), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/292 (40%), Positives = 155/292 (53%), Gaps = 29/292 (9%)
Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVY+G   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYNGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 128 GGFRNWLKEGHPVTSEPSRPE---------------------PAIFKATLNRSLLKTYEQ 166
Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           V  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L  +      +
Sbjct: 167 VLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMDFLTENGFEKSPE 226
Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 361
           EL+  FE + + L KP++     GVTAC +AL     GK DVA+YDGSW EW
Sbjct: 227 ELRAMFEAKKVDLTKPLIATXRKGVTACHIALAAYLCGKPDVAIYDGSWFEW 278

>pdb|3UTN|X Chain X, Crystal Structure Of Tum1 Protein From Saccharomyces Cerevisiae Length = 327

Iteration: 1
 Score =  159 bits (402), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 148/276 (53%), Gaps = 21/276 (7%)
Query: 95  LDASWYMPD-EQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG 153
           +DA+WY+P  +  N         IP ++FFD+D ++D+ +  PHM P+++ F  A+S LG
Sbjct: 50  VDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAMSNLG 109
Query: 154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAIL 213
           ++  D LVVYD  G FS+ R  W   V GH +V++L+    ++R   Y ++SS       
Sbjct: 110 VQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLN-NFNQYREFKYPLDSSKVAAFSP 168
Query: 214 KASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDG 273
              +  E+ E     ++V    ++  FQ  L+ + E  K+      +   DARS  RF+G
Sbjct: 169 YPKSHYESSESFQDKEIV---DYEEMFQ--LVKSGELAKK------FNAFDARSLGRFEG 217
Query: 274 DAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLP-ADE-----LKKRFEQEGISLE--KP 325
             PEPR  I SGH+PG++ +P+  +LD      P A E     L+K  +    +L+  KP
Sbjct: 218 TEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGEAIHATLEKALKDFHCTLDPSKP 277
Query: 326 VVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 361
            + +CGTGV+  I+   L   G  +V +YDGSWTEW
Sbjct: 278 TICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEW 313

>pdb|1UAR|A Chain A, Crystal Structure Of Rhodanese From Thermus Thermophilus Hb8 Length = 285

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 135/301 (44%), Gaps = 33/301 (10%)
Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           E +VS DW+  +L +P ++VL+      DE       Y   HIPGA    +D   D    
Sbjct: 7   EVLVSTDWVQEHLEDPKVRVLEV-----DED---ILLYDTGHIPGAQ--KIDWQRDFWDP 56
Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           +     SEE FA     LG+ N   +V+Y  K  + AA  +W F+  GH  V + +GG  
Sbjct: 57  VVRDFISEEEFAKLXERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLXNGGRQ 116
Query: 195 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRN 254
           +W   G  + +          S      E  Y+ + +    ++     H+I         
Sbjct: 117 KWVEEGRPLTTEV-------PSYPPGRYEVPYRDESI--RAYRDDVLEHII--------K 159
Query: 255 IEEGTYQLVDARSKARFDGDAPE----PRKG-IRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           ++EG   LVD RS   + G+       P++G +R+GH+PG+K IP+ + ++   T   A+
Sbjct: 160 VKEGKGALVDVRSPQEYRGELTHXPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAE 219
Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWGAQPDTP 368
           EL+  +E  GI+ +K +V        +      L   LG   V  YDGSWTEWG     P
Sbjct: 220 ELRALYEPLGITKDKDIVVYXRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVP 279
Query: 369 V 369
           +
Sbjct: 280 I 280

>pdb|3HWI|A Chain A, Crystal Structure Of Probable Thiosulfate Sulfurtransferase Cysa2 (Rhodanese-Like Protein) From Mycobacterium Tuberculosis Length = 298

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 130/303 (42%), Gaps = 38/303 (12%)
Query: 77  VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           +VS DW  +NL  P +  ++      DE  +    Y   HI GA+   +D   D    + 
Sbjct: 28  LVSADWAESNLHAPKVVFVEV-----DEDTSA---YDRDHIAGAI--KLDWRTDLQDPVK 77
Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
                 + F+  +S  G+ N+D +++Y G   + AA  +W F+++GH++V +LDGG  +W
Sbjct: 78  RDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKW 137
Query: 197 RASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIE 256
              G  + S      +   +A+              P      F+  ++  +     N++
Sbjct: 138 ELDGRPLSSDPVSRPVTSYTASP-------------PDNTIRAFRDEVLAAI-----NVK 179
Query: 257 EGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGSKCIPFPQMLDASQTLLPADEL 311
                L+D RS   F G    P      +  R GH+PG+  +P+ +  +   T    +EL
Sbjct: 180 ----NLIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEEL 235
Query: 312 KKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWGAQPDTPVE 370
            K +   G+   K  +  C  G  +      L   LG  +V  YDGSWTE+G+    P+E
Sbjct: 236 AKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIE 295
Query: 371 TSS 373
             S
Sbjct: 296 LGS 298

>pdb|3AAX|A Chain A, Crystal Structure Of Probable Thiosulfate Sulfurtransferase Cysa3 (Rv3117) From Mycobacterium Tuberculosis: Monoclinic Form Length = 277

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 129/304 (42%), Gaps = 40/304 (13%)
Query: 77  VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           +VS DW  +NL  P +  ++      DE  +    Y   HI GA+   +D   D    + 
Sbjct: 7   LVSADWAESNLHAPKVVFVEV-----DEDTSA---YDRDHIAGAI--KLDWRTDLQDPVK 56
Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
                 + F+  +S  G+ N+D +++Y G   + AA  +W F+++GH++V +LDGG  +W
Sbjct: 57  RDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKW 116
Query: 197 RASGYDVESSASGDAILKASAA-SEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNI 255
              G  + S      +   +A+  +   + ++ +V+     +                  
Sbjct: 117 ELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVKN----------------- 159
Query: 256 EEGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 310
                 L+D RS   F G    P      +  R GH+PG+  +P+ +  +   T    +E
Sbjct: 160 ------LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEE 213
Query: 311 LKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWGAQPDTPV 369
           L K +   G+   K  +  C  G  +      L   LG  +V  YDGSWTE+G+    P+
Sbjct: 214 LAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPI 273
Query: 370 ETSS 373
           E  S
Sbjct: 274 ELGS 277

>pdb|3AAY|A Chain A, Crystal Structure Of Probable Thiosulfate Sulfurtransferase Cysa3 (Rv3117) From Mycobacterium Tuberculosis: Orthorhombic Form Length = 277

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 128/304 (42%), Gaps = 40/304 (13%)
Query: 77  VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           +VS DW  +NL  P +  ++      DE  +    Y   HI GA+   +D   D    + 
Sbjct: 7   LVSADWAESNLHAPKVVFVEV-----DEDTSA---YDRDHIAGAI--KLDWRTDLQDPVK 56
Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
                 + F+  +S  G+ N+D +++Y G   + AA  +W F+++GH++V +LDGG  +W
Sbjct: 57  RDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKW 116
Query: 197 RASGYDVESSASGDAILKASAA-SEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNI 255
              G  + S      +   +A+  +   + ++ +V+     +                  
Sbjct: 117 ELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVKN----------------- 159
Query: 256 EEGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 310
                 L+D RS   F G    P      +  R GH+PG+  +P+ +  +   T    +E
Sbjct: 160 ------LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEE 213
Query: 311 LKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWGAQPDTPV 369
           L K +   G+   K  +     G  +      L   LG  +V  YDGSWTE+G+    P+
Sbjct: 214 LAKLYADAGLDNSKETIAYXRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPI 273
Query: 370 ETSS 373
           E  S
Sbjct: 274 ELGS 277

>pdb|1H4K|X Chain X, Sulfurtransferase From Azotobacter Vinelandii In Complex With Hypophosphite Length = 271

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 114/288 (39%), Gaps = 33/288 (11%)
Query: 83  LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSE 142
           L A L  P+L ++D +             Y   HIPGA F D           P + P  
Sbjct: 16  LQARLSAPELILVDLT---------SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPR 66
Query: 143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD 202
           E   +    LG   +   VVYD +G   A R  W+  V G  R   L+GGL  W A    
Sbjct: 67  EQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRP 126
Query: 203 VESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQL 262
           +         L A A              GP       +P    + + +   +      +
Sbjct: 127 LSRE------LPAPAG-------------GPVALSLHDEPTA--SRDYLLGRLGAADLAI 165
Query: 263 VDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL 322
            DARS   + G+     KG   GH+PG+    +   +D S+ L    ++  R E+ GI+ 
Sbjct: 166 WDARSPQEYRGEKVLAAKG---GHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITP 222
Query: 323 EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE 370
           +K +VT C T   + +  L    LG   V  Y GSW EWG  PDTPVE
Sbjct: 223 DKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE 270

>pdb|1E0C|A Chain A, Sulfurtransferase From Azotobacter Vinelandii Length = 271

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 113/288 (39%), Gaps = 33/288 (11%)
Query: 83  LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSE 142
           L A L  P+L ++D +             Y   HIPGA F D           P + P  
Sbjct: 16  LQARLSAPELILVDLT---------SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPR 66
Query: 143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD 202
           E   +    LG   +   VVYD +G   A R  W+  V G  R   L+GGL  W A    
Sbjct: 67  EQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRP 126
Query: 203 VESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQL 262
           +         L A A              GP       +P    + + +   +      +
Sbjct: 127 LSRE------LPAPAG-------------GPVALSLHDEPTA--SRDYLLGRLGAADLAI 165
Query: 263 VDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL 322
            DARS   + G+     KG   GH+PG+    +   +D S+ L    ++  R E+ GI+ 
Sbjct: 166 WDARSPQEYRGEKVLAAKG---GHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITP 222
Query: 323 EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE 370
           +K +VT   T   + +  L    LG   V  Y GSW EWG  PDTPVE
Sbjct: 223 DKEIVTHXQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE 270

>pdb|3IPP|A Chain A, Crystal Structure Of Sulfur-Free Ynje Length = 416

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 135/316 (42%), Gaps = 51/316 (16%)
Query: 75  EPVVSVDWLHANLREP---------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDV 125
           E +V   WLH +L++          D KV++A+W  P       + Y ++HIPGA + D 
Sbjct: 124 EQLVYPQWLH-DLQQGKEVTAKPAGDWKVIEAAWGAP-------KLYLISHIPGADYIDT 175
Query: 126 DGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDR 185
           + V   +  L + + S+E   A ++  G+ +   +++Y G+ +++AARV  +    G   
Sbjct: 176 NEV--ESEPLWNKV-SDEQLKAMLAKHGIRHDTTVILY-GRDVYAAARVAQIMLYAGVKD 231
Query: 186 VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKF--QPH 243
           V +LDGG   W  +G  VE                        +V     F  K   QP 
Sbjct: 232 VRLLDGGWQTWSDAGLPVERGTPP-------------------KVKAEPDFGVKIPAQPQ 272
Query: 244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAP-----EPR---KGIRSGHVPGSKCIPF 295
           L+  +EQ +  +      LV  RS   F G        +P+    G R GH  GS     
Sbjct: 273 LMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHA-GSDSTHM 331
Query: 296 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYD 355
               +   T+  AD++   ++   I  E+ V   CGTG  A    +    +G  +V+VYD
Sbjct: 332 EDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYD 391
Query: 356 GSWTEWGAQPDTPVET 371
           G W EW + P  PV T
Sbjct: 392 GGWYEWSSDPKNPVAT 407

>pdb|3HZU|A Chain A, Crystal Structure Of Probable Thiosulfate Sulfurtransferase Ssea (Rhodanese) From Mycobacterium Tuberculosis Length = 318

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 134/307 (43%), Gaps = 51/307 (16%)
Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           E +V+ DWL A++  P L ++++     DE       Y V HIPGA+   +D   D    
Sbjct: 39  ERLVTADWLSAHMGAPGLAIVES-----DED---VLLYDVGHIPGAV--KIDWHTDLNDP 88
Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
                 + E FA  +   G+   D +V+Y  K  + AA   W+F +FGH  V +L+GG  
Sbjct: 89  RVRDYINGEQFAELMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRD 148
Query: 195 RW----RASGYDVES-SASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLE 249
            W    R +  DV + + +G  +++    ++A  + ++  V+                  
Sbjct: 149 LWLAERRETTLDVPTKTCTGYPVVQ---RNDAPIRAFRDDVLAIL--------------- 190
Query: 250 QVKRNIEEGTYQLVDARSKARFDG------DAPEPRKGIRSGHVPGSKCIPFPQMLDASQ 303
                   G   L+D RS   + G      D PE    +R+GH+P +  IP+ +  D S 
Sbjct: 191 --------GAQPLIDVRSPEEYTGKRTHMPDYPE-EGALRAGHIPTAVHIPWGKAADESG 241
Query: 304 TLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWG 362
                +EL++ ++   I+ +   V  C  G  +      L   LGK DV  YDGSWTEWG
Sbjct: 242 RFRSREELERLYDF--INPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWG 299
Query: 363 AQPDTPV 369
                P+
Sbjct: 300 NAVRVPI 306

>pdb|3IPO|A Chain A, Crystal Structure Of Ynje Length = 416

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 134/316 (42%), Gaps = 51/316 (16%)
Query: 75  EPVVSVDWLHANLREP---------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDV 125
           E +V   WLH +L++          D KV++A+W  P       + Y ++HIPGA + D 
Sbjct: 124 EQLVYPQWLH-DLQQGKEVTAKPAGDWKVIEAAWGAP-------KLYLISHIPGADYIDT 175
Query: 126 DGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDR 185
           + V   +  L + + S+E   A ++  G+ +   +++Y G+ +++AARV  +    G   
Sbjct: 176 NEV--ESEPLWNKV-SDEQLKAMLAKHGIRHDTTVILY-GRDVYAAARVAQIMLYAGVKD 231
Query: 186 VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKF--QPH 243
           V +LDGG   W  +G  VE                        +V     F  K   QP 
Sbjct: 232 VRLLDGGWQTWSDAGLPVERGTPP-------------------KVKAEPDFGVKIPAQPQ 272
Query: 244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAP-----EPR---KGIRSGHVPGSKCIPF 295
           L+  +EQ +  +      LV  RS   F G        +P+    G R GH  GS     
Sbjct: 273 LMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHA-GSDSTHM 331
Query: 296 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYD 355
               +   T+  AD++   ++   I  E+ V    GTG  A    +    +G  +V+VYD
Sbjct: 332 EDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYXGTGWRASETFMYARAMGWKNVSVYD 391
Query: 356 GSWTEWGAQPDTPVET 371
           G W EW + P  PV T
Sbjct: 392 GGWYEWSSDPKNPVAT 407

>pdb|2WLX|A Chain A, Putative Thiosulfate Sulfurtransferase Ynje Length = 423

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 134/316 (42%), Gaps = 51/316 (16%)
Query: 75  EPVVSVDWLHANLREP---------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDV 125
           E +V   WLH +L++          D KV++A+W  P       + Y ++HIPGA + D 
Sbjct: 123 EQLVYPQWLH-DLQQGKEVTAKPAGDWKVIEAAWGAP-------KLYLISHIPGADYIDT 174
Query: 126 DGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDR 185
           + V   +  L + + S+E   A ++  G+ +   +++Y G+ +++AARV  +    G   
Sbjct: 175 NEV--ESEPLWNKV-SDEQLKAMLAKHGIRHDTTVILY-GRDVYAAARVAQIMLYAGVKD 230
Query: 186 VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKF--QPH 243
           V +LDGG   W  +G  VE                        +V     F  K   QP 
Sbjct: 231 VRLLDGGWQTWSDAGLPVERGTPP-------------------KVKAEPDFGVKIPAQPQ 271
Query: 244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAP-----EPR---KGIRSGHVPGSKCIPF 295
           L+  +EQ +  +      LV  RS   F G        +P+    G R GH  GS     
Sbjct: 272 LMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHA-GSDSTHM 330
Query: 296 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYD 355
               +   T+  AD++   ++   I  E+ V    GTG  A    +    +G  +V+VYD
Sbjct: 331 EDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYXGTGWRASETFMYARAMGWKNVSVYD 390
Query: 356 GSWTEWGAQPDTPVET 371
           G W EW + P  PV T
Sbjct: 391 GGWYEWSSDPKNPVAT 406

>pdb|3P3A|A Chain A, Crystal Structure Of A Putative Thiosulfate Sulfurtransferase From Mycobacterium Thermoresistible Length = 320

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 126/307 (41%), Gaps = 51/307 (16%)
Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           E +V+ DWL +NL  P L ++++     DE       Y   HIPGA+   +D   D    
Sbjct: 40  ERLVTADWLASNLGRPGLVIVES-----DED---VLLYDTGHIPGAV--KIDWHTDLNDP 89
Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
                 + E FAA +   G+   D +V+Y  K  + AA   W+F +FGH  V +LDGG  
Sbjct: 90  AVRDYINGEQFAALMDRKGVTRDDTVVIYGDKSNWWAAYAMWVFHLFGHPDVRLLDGGRD 149
Query: 195 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRN 254
            W ++G D                     +V   Q  G    +    P   +  + V R 
Sbjct: 150 LWVSTGRDTTL------------------EVPTRQTSGYPVVERNDAPIRAFK-DDVLRV 190
Query: 255 IEEGTYQLVDARSKARFDG------DAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPA 308
           +  G   L+D RS   + G      D PE    +R GH+P +  +P+      S+     
Sbjct: 191 L--GKEPLIDVRSPQEYTGERTHMPDYPE-EGALRGGHIPTAVSVPW------SKAAYDD 241
Query: 309 DELKKRFEQEGI-----SLEKPVVTACGTGVTACILALGLNRLGKH-DVAVYDGSWTEWG 362
              + R E E I       +KP+V  C  G  +      L  L  H +V  YDGSWTEWG
Sbjct: 242 GRFRARAELEEIYGFVKPDDKPIVY-CRIGERSSHTWFVLTYLLGHPNVRNYDGSWTEWG 300
Query: 363 AQPDTPV 369
                P+
Sbjct: 301 NAVRVPI 307

>pdb|2WLR|A Chain A, Putative Thiosulfate Sulfurtransferase Ynje Length = 423

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 129/316 (40%), Gaps = 51/316 (16%)
Query: 75  EPVVSVDWLHANLREP---------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDV 125
           E +V   WLH +L++          D KV++A+W  P       + Y ++HIPGA + D 
Sbjct: 123 EQLVYPQWLH-DLQQGKEVTAKPAGDWKVIEAAWGAP-------KLYLISHIPGADYIDT 174
Query: 126 DGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDR 185
           + V   +  L + + S+E   A ++  G+ +   +++Y G+ +++AARV  +    G   
Sbjct: 175 NEV--ESEPLWNKV-SDEQLKAXLAKHGIRHDTTVILY-GRDVYAAARVAQIXLYAGVKD 230
Query: 186 VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKF--QPH 243
           V +LDGG   W  +G  VE                        +V     F  K   QP 
Sbjct: 231 VRLLDGGWQTWSDAGLPVERGTPP-------------------KVKAEPDFGVKIPAQPQ 271
Query: 244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAP-----EPR---KGIRSGHVPGSKCIPF 295
           L    EQ +  +      LV  RS   F G        +P+    G R GH  GS     
Sbjct: 272 LXLDXEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHA-GSDSTHX 330
Query: 296 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYD 355
               +   T   AD++   ++   I  E+ V    GTG  A          G  +V+VYD
Sbjct: 331 EDFHNPDGTXRSADDITAXWKAWNIKPEQQVSFYXGTGWRASETFXYARAXGWKNVSVYD 390
Query: 356 GSWTEWGAQPDTPVET 371
           G W EW + P  PV T
Sbjct: 391 GGWYEWSSDPKNPVAT 406

>pdb|1OKG|A Chain A, 3-Mercaptopyruvate Sulfurtransferase From Leishmania Major Length = 373

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 118/299 (39%), Gaps = 47/299 (15%)
Query: 91  DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR---TTNLPHMLPSEEAFAA 147
           + +++D  + +  +     Q Y   H+  A+  DVD    +   T+   H LP    F  
Sbjct: 27  EYRIVDCRYSLKIKDHGSIQ-YAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFID 85
Query: 148 AVSALGLENKDGLVVYDGK-GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESS 206
              A G   +  ++ YD + G     R+WW     G D  +V++GG    +A+G + ES 
Sbjct: 86  WCXANGXAGELPVLCYDDECGAXGGCRLWWXLNSLGAD-AYVINGGFQACKAAGLEXESG 144
Query: 207 ASGDAILKASAASEAIEKVYQGQVVGPTT---FQTKFQPHLIWTLEQVKRNIEEGTYQ-- 261
                                  +  P T   F+T FQ H +         ++E   Q  
Sbjct: 145 EPS-------------------SLPRPATHWPFKTAFQHHYL---------VDEIPPQAI 176
Query: 262 LVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQML---DASQTLLPADELKKRF--- 315
           + DARS  RF             GH+ G++ +P+   L      + L   +E++      
Sbjct: 177 ITDARSADRFASTVRPYAADKXPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIXTV 236
Query: 316 -EQEGISLE-KPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS 372
            +  G + +    V + G+GVTACI    ++ LG     +Y GSW+E+      P+  S
Sbjct: 237 VQGAGDAADLSSFVFSXGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIXRS 295

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	373
1urh_A	280	3-mercaptopyruvate sulfurtransferase; rhodanese; 2	1e-156
3olh_A	302	MST, 3-mercaptopyruvate sulfurtransferase; structu	1e-153
1rhs_A	296	Sulfur-substituted rhodanese; transferase, sulfurt	1e-151
3aay_A	277	Putative thiosulfate sulfurtransferase; sulfurtran	1e-129
1e0c_A	271	Rhodanese, sulfurtransferase; sulfur metabolism, t	1e-128
1uar_A	285	Rhodanese; sulfurtransferase, riken structural gen	1e-128
1okg_A	373	Possible 3-mercaptopyruvate sulfurtransferase; rho	1e-127
3hzu_A	318	Thiosulfate sulfurtransferase SSEA; niaid, ssgcid,	1e-122
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	1e-117
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	1e-22
2eg4_A	230	Probable thiosulfate sulfurtransferase; structural	8e-85
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	2e-20
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	2e-15
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	2e-13
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	2e-09
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	2e-09
3d1p_A	139	Putative thiosulfate sulfurtransferase YOR285W; at	8e-17
3d1p_A	139	Putative thiosulfate sulfurtransferase YOR285W; at	9e-07
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	1e-08
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	7e-06
1t3k_A	152	Arath CDC25, dual-specificity tyrosine phosphatase	2e-08
1t3k_A	152	Arath CDC25, dual-specificity tyrosine phosphatase	2e-05
3ilm_A	141	ALR3790 protein; rhodanese-like, NSR437H, NESG, st	5e-08
3ilm_A	141	ALR3790 protein; rhodanese-like, NSR437H, NESG, st	2e-06
3r2u_A	466	Metallo-beta-lactamase family protein; structural	5e-08
3nhv_A	144	BH2092 protein; alpha-beta protein, structural gen	1e-07
3nhv_A	144	BH2092 protein; alpha-beta protein, structural gen	1e-06
1tq1_A	129	AT5G66040, senescence-associated family protein; C	3e-07
1tq1_A	129	AT5G66040, senescence-associated family protein; C	3e-05
1gmx_A	108	GLPE protein; transferase, rhodanese, sulfurtransf	6e-07
1gmx_A	108	GLPE protein; transferase, rhodanese, sulfurtransf	7e-06
3hix_A	106	ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q	1e-06
3hix_A	106	ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q	3e-06
3ics_A	588	Coenzyme A-disulfide reductase; pyridine nucleotid	1e-06
3flh_A	124	Uncharacterized protein LP_1913; alpha-beta protei	2e-06
3flh_A	124	Uncharacterized protein LP_1913; alpha-beta protei	6e-04
2hhg_A	139	Hypothetical protein RPA3614; MCSG, structural gen	2e-06
2j6p_A	152	SB(V)-AS(V) reductase; arsenate reductase, antimon	3e-06
1hzm_A	154	Dual specificity protein phosphatase 6; hydrolase;	3e-06
2jtq_A	85	Phage shock protein E; solution structure rhodanes	7e-06
3f4a_A	169	Uncharacterized protein YGR203W; protein phosphata	1e-05
3ntd_A	565	FAD-dependent pyridine nucleotide-disulphide oxido	2e-05
2vsw_A	153	Dual specificity protein phosphatase 16; hydrolase	7e-05
2k0z_A	110	Uncharacterized protein HP1203; A/B domain, struct	3e-04
2k0z_A	110	Uncharacterized protein HP1203; A/B domain, struct	4e-04
2gwf_A	157	Ubiquitin carboxyl-terminal hydrolase 8; protein-p	4e-04
3eme_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	4e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04
3tg1_B	158	Dual specificity protein phosphatase 10; kinase/rh	6e-04
1whb_A	157	KIAA0055; deubiqutinating enzyme, UBPY, structural	8e-04

>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2 Length = 280

 Score =  440 bits (1134), Expect = e-156
 Identities = 112/297 (37%), Positives = 163/297 (54%), Gaps = 23/297 (7%)

Query: 76  PVVSVDWLHANLREPDLKVLDASWYMPD-EQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
             V  DWL  ++ +P+++++DA    P  E RN  QEY   HIPGA+FFD++ ++D T+ 
Sbjct: 4   WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSP 63

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           LPHMLP  E FA A+  LG+     L+VYD   +FSA R WWM R FG ++V +L GGL 
Sbjct: 64  LPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLA 123

Query: 195 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRN 254
            W+     +E  A                       +    F   F P  +  +  V   
Sbjct: 124 GWQRDDLLLEEGAV---------------------ELPEGEFNAAFNPEAVVKVTDVLLA 162

Query: 255 IEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKR 314
             E T Q++DAR  ARF+ +  EPR G+R GH+PG+  +P+ +++     L   DEL   
Sbjct: 163 SHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR-EGELKTTDELDAI 221

Query: 315 FEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET 371
           F   G+S +KP++ +CG+GVTA ++ L L  L   +V +YDG+W+EWGA+ D PVE 
Sbjct: 222 FFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEP 278

>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens} Length = 302

 Score =  433 bits (1115), Expect = e-153
 Identities = 121/302 (40%), Positives = 165/302 (54%), Gaps = 29/302 (9%)

Query: 76  PVVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR 131
            +VS  W+   LR P     L++LDASWY+P   R+  +E++  HIPGA FFD+D  +DR
Sbjct: 22  SMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDR 81

Query: 132 TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVL 189
           T+   HMLP  E FA     LG+     +V+YD   +G++SA RVWWMFR FGH  V +L
Sbjct: 82  TSPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLL 141

Query: 190 DGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLE 249
           DGGL  W      + S  S                        P  F+ +  P  I T E
Sbjct: 142 DGGLRHWLRQNLPLSSGKS---------------------QPAPAEFRAQLDPAFIKTYE 180

Query: 250 QVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
            +K N+E   +Q+VD+R+  RF G  PEPR GI  GH+PG+  IPF   L         +
Sbjct: 181 DIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPE 240

Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWG--AQPDT 367
           E++  F+++ + L KP+V  CG+GVTAC +ALG    GK DV +YDGSW EW   A+P+ 
Sbjct: 241 EIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPED 300

Query: 368 PV 369
            +
Sbjct: 301 VI 302

>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A Length = 296

 Score =  426 bits (1098), Expect = e-151
 Identities = 125/305 (40%), Positives = 160/305 (52%), Gaps = 31/305 (10%)

Query: 76  PVVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR 131
            +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+
Sbjct: 8   ALVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDK 66

Query: 132 TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVL 189
            +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL
Sbjct: 67  ASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVL 126

Query: 190 DGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLE 249
           +GG   W   G+ V S  S                        P  F+      L+ T E
Sbjct: 127 NGGFRNWLKEGHPVTSEPS---------------------RPEPAIFKATLNRSLLKTYE 165

Query: 250 QVKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPA 308
           QV  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         
Sbjct: 166 QVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSP 225

Query: 309 DELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWG--AQPD 366
           +EL+  FE + + L KP++  C  GVTAC +AL     GK DVA+YDGSW EW   A P+
Sbjct: 226 EELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPE 285

Query: 367 TPVET 371
           T V  
Sbjct: 286 TWVSQ 290

>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A Length = 277

 Score =  371 bits (954), Expect = e-129
 Identities = 75/306 (24%), Positives = 123/306 (40%), Gaps = 40/306 (13%)

Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           + +VS DW  +NL  P +  ++               Y   HI GA+  D     D    
Sbjct: 5   DVLVSADWAESNLHAPKVVFVEVDEDTS--------AYDRDHIAGAIKLDWR--TDLQDP 54

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           +       + F+  +S  G+ N+D +++Y G   + AA  +W F+++GH++V +LDGG  
Sbjct: 55  VKRDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRK 114

Query: 195 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLI-WTLEQVKR 253
           +W   G  + S                            T++      + I    ++V  
Sbjct: 115 KWELDGRPLSSDPV---------------------SRPVTSYTASPPDNTIRAFRDEVLA 153

Query: 254 NIEEGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGSKCIPFPQMLDASQTLLPA 308
            I      L+D RS   F G    P      +  R GH+PG+  +P+ +  +   T    
Sbjct: 154 AI--NVKNLIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSD 211

Query: 309 DELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWGAQPDT 367
           +EL K +   G+   K  +  C  G  +      L   LG  +V  YDGSWTE+G+    
Sbjct: 212 EELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGA 271

Query: 368 PVETSS 373
           P+E  S
Sbjct: 272 PIELGS 277

>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X Length = 271

 Score =  367 bits (945), Expect = e-128
 Identities = 77/307 (25%), Positives = 113/307 (36%), Gaps = 38/307 (12%)

Query: 64  ADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFF 123
            D+++L       V+    L A L  P+L ++D +             Y   HIPGA F 
Sbjct: 2   DDFASL-----PLVIEPADLQARLSAPELILVDLTSA---------ARYAEGHIPGARFV 47

Query: 124 DVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGH 183
           D           P + P  E   +    LG   +   VVYD +G   A R  W+  V G 
Sbjct: 48  DPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQ 107

Query: 184 DRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPH 243
            R   L+GGL  W A    +                                        
Sbjct: 108 QRYHYLNGGLTAWLAEDRPLSRELP---------------------APAGGPVALSLHDE 146

Query: 244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ 303
              + + +   +      + DARS   + G+        + GH+PG+    +   +D S+
Sbjct: 147 PTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAA---KGGHIPGAVNFEWTAAMDPSR 203

Query: 304 TLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA 363
            L    ++  R E+ GI+ +K +VT C T   + +  L    LG   V  Y GSW EWG 
Sbjct: 204 ALRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGN 263

Query: 364 QPDTPVE 370
            PDTPVE
Sbjct: 264 HPDTPVE 270

>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2 Length = 285

 Score =  368 bits (946), Expect = e-128
 Identities = 83/307 (27%), Positives = 132/307 (42%), Gaps = 41/307 (13%)

Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           E +VS DW+  +L +P ++VL+               Y   HIPGA   D     D    
Sbjct: 7   EVLVSTDWVQEHLEDPKVRVLEVDE--------DILLYDTGHIPGAQKIDWQ--RDFWDP 56

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           +     SEE FA  +  LG+ N   +V+Y  K  + AA  +W F+  GH  V +++GG  
Sbjct: 57  VVRDFISEEEFAKLMERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQ 116

Query: 195 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLI----WTLEQ 250
           +W   G  + +                           P  ++  ++   I      + +
Sbjct: 117 KWVEEGRPLTTEVP---------------------SYPPGRYEVPYRDESIRAYRDDVLE 155

Query: 251 VKRNIEEGTYQLVDARSKARFDGD----APEPRKG-IRSGHVPGSKCIPFPQMLDASQTL 305
               ++EG   LVD RS   + G+       P++G +R+GH+PG+K IP+ + ++   T 
Sbjct: 156 HIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTF 215

Query: 306 LPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWGAQ 364
             A+EL+  +E  GI+ +K +V  C     +      L   LG   V  YDGSWTEWG  
Sbjct: 216 KSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNL 275

Query: 365 PDTPVET 371
              P+  
Sbjct: 276 VGVPIAK 282

>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3 Length = 373

 Score =  369 bits (948), Expect = e-127
 Identities = 64/318 (20%), Positives = 115/318 (36%), Gaps = 39/318 (12%)

Query: 67  STLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVD 126
           +     P +  +    +  +L   + +++D  + +   + +   +Y   H+  A+  DVD
Sbjct: 5   AAAPKHPGKVFLDPSEVADHL--AEYRIVDCRYSLKI-KDHGSIQYAKEHVKSAIRADVD 61

Query: 127 GVADR---TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK-GIFSAARVWWMFRVFG 182
               +   T+   H LP    F     A G+  +  ++ YD + G     R+WWM    G
Sbjct: 62  TNLSKLVPTSTARHPLPPXAEFIDWCMANGMAGELPVLCYDDECGAMGGCRLWWMLNSLG 121

Query: 183 HDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQP 242
            D  +V++GG    +A+G ++ES                                    P
Sbjct: 122 AD-AYVINGGFQACKAAGLEMESG-----------------------EPSSLPRPATHWP 157

Query: 243 HLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS 302
                      +       + DARS  RF             GH+ G++ +P+   L   
Sbjct: 158 FKTAFQHHYLVDEIPPQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTR 217

Query: 303 ---QTLLPADELKKRFEQ-----EGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVY 354
              + L   +E++             +     V +CG+GVTACI    ++ LG     +Y
Sbjct: 218 GDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLY 277

Query: 355 DGSWTEWGAQPDTPVETS 372
            GSW+E+      P+  S
Sbjct: 278 CGSWSEYSGLFRPPIMRS 295

>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A Length = 318

 Score =  354 bits (910), Expect = e-122
 Identities = 78/339 (23%), Positives = 123/339 (36%), Gaps = 39/339 (11%)

Query: 39  HTHTTLKTSSSQSPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDAS 98
           H H     +         S+        +  + +  E +V+ DWL A++  P L ++++ 
Sbjct: 3   HHHHHHMGTLEAQTQGPGSMPLPADPSPTLSAYAHPERLVTADWLSAHMGAPGLAIVESD 62

Query: 99  WYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKD 158
                        Y V HIPGA+  D     D          + E FA  +   G+   D
Sbjct: 63  E--------DVLLYDVGHIPGAVKIDWH--TDLNDPRVRDYINGEQFAELMDRKGIARDD 112

Query: 159 GLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAA 218
            +V+Y  K  + AA   W+F +FGH  V +L+GG   W A   +                
Sbjct: 113 TVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVP---------- 162

Query: 219 SEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEP 278
                          T +    +        +       G   L+D RS   + G     
Sbjct: 163 -----------TKTCTGYPVVQRNDAPIRAFRDDVLAILGAQPLIDVRSPEEYTGKRTHM 211

Query: 279 -----RKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTG 333
                   +R+GH+P +  IP+ +  D S      +EL++ +  + I+ +   V  C  G
Sbjct: 212 PDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLY--DFINPDDQTVVYCRIG 269

Query: 334 VTACILALGLNR-LGKHDVAVYDGSWTEWGAQPDTPVET 371
             +      L   LGK DV  YDGSWTEWG     P+  
Sbjct: 270 ERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVA 308

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A Length = 423

 Score =  346 bits (889), Expect = e-117
 Identities = 78/331 (23%), Positives = 123/331 (37%), Gaps = 43/331 (12%)

Query: 56  SSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREP--------DLKVLDASWYMPDEQRN 107
           S L+           +   E +V   WLH   +          D KV++A+W  P     
Sbjct: 104 SILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAP----- 158

Query: 108 PFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG 167
             + Y ++HIPGA + D + V            S+E   A ++  G+ +   +++Y    
Sbjct: 159 --KLYLISHIPGADYIDTNEVES---EPLWNKVSDEQLKAMLAKHGIRHDTTVILYGR-D 212

Query: 168 IFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQ 227
           +++AARV  +    G   V +LDGG   W  +G  VE                       
Sbjct: 213 VYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKV---------------- 256

Query: 228 GQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHV 287
            +       +   QP L+  +EQ +  +      LV  RS   F G           G +
Sbjct: 257 -KAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEI 315

Query: 288 PG-------SKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILA 340
            G       S         +   T+  AD++   ++   I  E+ V   CGTG  A    
Sbjct: 316 AGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETF 375

Query: 341 LGLNRLGKHDVAVYDGSWTEWGAQPDTPVET 371
           +    +G  +V+VYDG W EW + P  PV T
Sbjct: 376 MYARAMGWKNVSVYDGGWYEWSSDPKNPVAT 406

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A Length = 423

 Score = 97.9 bits (244), Expect = 1e-22
 Identities = 41/302 (13%), Positives = 74/302 (24%), Gaps = 65/302 (21%)

Query: 78  VSVDWLHANLREPDLKVLDA-------SWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD 130
           ++       L++ + K +D         W       +        H   AL         
Sbjct: 6   LAKPLTLDQLQQQNGKAIDTRPSAFYNGWPQTLNGPS-------GHELAALNLSAS---- 54

Query: 131 RTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLD 190
                     S E   A +    L+    + +Y          V    +  G   + +L 
Sbjct: 55  -----WLDKMSTEQLNAWIKQHNLKTDAPVALYGNDK--DVDAVKTRLQKAGLTHISILS 107

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
             L                                        +  Q       +   + 
Sbjct: 108 DALSEP-------------------------------------SRLQKLPHFEQLVYPQW 130

Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ-TLLPAD 309
           +    +        A      +     P K     H+PG+  I   ++        +  +
Sbjct: 131 LHDLQQGKEVTAKPAGDWKVIEAAWGAP-KLYLISHIPGADYIDTNEVESEPLWNKVSDE 189

Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPV 369
           +LK    + GI  +  V+        A  +A  +   G  DV + DG W  W      PV
Sbjct: 190 QLKAMLAKHGIRHDTTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDA-GLPV 248

Query: 370 ET 371
           E 
Sbjct: 249 ER 250

>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A Length = 230

 Score =  255 bits (655), Expect = 8e-85
 Identities = 55/280 (19%), Positives = 84/280 (30%), Gaps = 56/280 (20%)

Query: 91  DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS 150
           D  ++D           P   Y+  H+PGA   D+     R      +   E        
Sbjct: 6   DAVLVDTR---------PRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQ 56

Query: 151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGD 210
            LGL     +V+YD        R  +   + G + V +   G   +     + +      
Sbjct: 57  TLGLR--SPVVLYDEGLTSRLCRTAFFLGLGGLE-VQLWTEGWEPYATEKEEPK------ 107

Query: 211 AILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 270
                                  T    K +   + T ++  R+       L+D RS   
Sbjct: 108 --------------------PERTEVVAKLRRDWLLTADEAARHP-----LLLDVRSPEE 142

Query: 271 FDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTAC 330
           F G    P    R G +PGSK  P    L                E+ G+   + V   C
Sbjct: 143 FQGKVHPPC-CPRGGRIPGSKNAPLELFLSPEG----------LLERLGLQPGQEVGVYC 191

Query: 331 GTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE 370
            +G  + +    L  LG      Y GS  EW  +   P E
Sbjct: 192 HSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQE-GLPTE 229

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 91.7 bits (227), Expect = 2e-20
 Identities = 49/288 (17%), Positives = 77/288 (26%), Gaps = 71/288 (24%)

Query: 76  PVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
            V +   + A L    +L +LD         R     +  AH   A             N
Sbjct: 7   AVRTFHDIRAALLARRELALLDV--------REE-DPFAQAHPLFAA------------N 45

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           LP            + A        + VYD     +           G+  V +LDGGL 
Sbjct: 46  LPL-----SRLELEIHARVPRRDTPITVYDDGEGLAP-VAAQRLHDLGYSDVALLDGGLS 99

Query: 195 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRN 254
            WR +G ++      D  + + A  E +E       +     Q                 
Sbjct: 100 GWRNAGGELFR----DVNVPSKAFGELVEAERHTPSLAAEEVQALLD------------- 142

Query: 255 IEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKR 314
                  ++DAR    +           ++  +PG   +P               EL  R
Sbjct: 143 -ARAEAVILDARRFDEY-----------QTMSIPGGISVPG-------------AELVLR 177

Query: 315 FEQEGISLEKPVVTACGTGVTACILALGLNRLG-KHDVAVYDGSWTEW 361
             +        V+  C     + I    L   G  + VA        W
Sbjct: 178 VAELAPDPRTRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGTIGW 225

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 76.7 bits (188), Expect = 2e-15
 Identities = 41/332 (12%), Positives = 83/332 (25%), Gaps = 83/332 (25%)

Query: 41  HTTLKTSSSQSPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWY 100
                  + +   +              ++       + +  L     E D      + Y
Sbjct: 230 QQLEHGQTRRFGAISQDTRKAAAQRARAVADRAGVERLDLAGLAQWQDEHD-----RTTY 284

Query: 101 MPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGL 160
           + D  R P  EY+  H+PG+                   P  +          +     L
Sbjct: 285 LLD-VRTPE-EYEAGHLPGSRS----------------TPGGQLVQETDHVASVRGAR-L 325

Query: 161 VVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASE 220
           V+ D  G+ +     W+ ++ G     +       +   G                    
Sbjct: 326 VLVDDDGVRANMSASWLAQM-GWQVAVLDGLSEADFSERGA------------------- 365

Query: 221 AIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRK 280
                        +    +           +   + E   +++D  + A +         
Sbjct: 366 ------------WSAPLPRQPRADTIDPTTLADWLGEPGTRVLDFTASANY--------- 404

Query: 281 GIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILA 340
                H+PG+  +   Q+  A + L                  +  V  CG+ + A    
Sbjct: 405 --AKRHIPGAAWVLRSQLKQALERL-GTA--------------ERYVLTCGSSLLARFAV 447

Query: 341 LGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS 372
             +  L    V + DG  + W A    P E  
Sbjct: 448 AEVQALSGKPVFLLDGGTSAWVAA-GLPTEDG 478

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 70.1 bits (171), Expect = 2e-13
 Identities = 45/295 (15%), Positives = 87/295 (29%), Gaps = 63/295 (21%)

Query: 75  EPVVSVDWLHANL-REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT 133
            P ++ + + A L    +  +LDA           F EYQ   IPG +      +  R  
Sbjct: 129 TPSLAAEEVQALLDARAEAVILDA---------RRFDEYQTMSIPGGISVPGAELVLRVA 179

Query: 134 NLPHMLPSEEAFAAAVSALGLENKDG-LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGG 192
            L                    +    ++V       S      +      + V  L  G
Sbjct: 180 ELA------------------PDPRTRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNG 221

Query: 193 LPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVK 252
              W  +G  +E   +      +    +A  +  +           +     +  L  + 
Sbjct: 222 TIGWTLAGQQLEHGQTRRFGAISQDTRKAAAQRAR-------AVADRAGVERL-DLAGLA 273

Query: 253 RNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 310
           +  +E   T  L+D R+   +            +GH+PGS+  P               +
Sbjct: 274 QWQDEHDRTTYLLDVRTPEEY-----------EAGHLPGSRSTPG-------------GQ 309

Query: 311 LKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQP 365
           L +  +         +V     GV A + A  L ++G     +   S  ++  + 
Sbjct: 310 LVQETDHVASVRGARLVLVDDDGVRANMSASWLAQMGWQVAVLDGLSEADFSERG 364

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 57.8 bits (139), Expect = 2e-09
 Identities = 27/136 (19%), Positives = 35/136 (25%), Gaps = 29/136 (21%)

Query: 76  PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 135
             +    L   L EP  +VLD               Y   HIPGA +     +      L
Sbjct: 377 DTIDPTTLADWLGEPGTRVLDF--------TAS-ANYAKRHIPGAAWVLRSQLKQALERL 427

Query: 136 PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR 195
                                     V        A       +      V++LDGG   
Sbjct: 428 G--------------------TAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSA 467

Query: 196 WRASGYDVESSASGDA 211
           W A+G   E   S  A
Sbjct: 468 WVAAGLPTEDGESLLA 483

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 57.8 bits (139), Expect = 2e-09
 Identities = 20/118 (16%), Positives = 34/118 (28%), Gaps = 25/118 (21%)

Query: 247 TLEQVKRNIEEGT-YQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTL 305
           T   ++  +       L+D R +  F              H   +  +P           
Sbjct: 10  TFHDIRAALLARRELALLDVREEDPFAQ-----------AHPLFAANLPL---------- 48

Query: 306 LPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA 363
                L+          + P+         A + A  L+ LG  DVA+ DG  + W  
Sbjct: 49  ---SRLELEIHARVPRRDTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLSGWRN 103

>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae} Length = 139

 Score = 75.6 bits (186), Expect = 8e-17
 Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 15/127 (11%)

Query: 246 WTLEQVKRNIEEGT--YQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ 303
           ++ E +KR + +      LVD R  + +              H+P S  +P+    DA  
Sbjct: 25  YSFEDMKRIVGKHDPNVVLVDVREPSEYS-----------IVHIPASINVPYRSHPDAFA 73

Query: 304 TLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA 363
             L   E +K+         K ++  C +G          +  G  + ++Y GS  +W +
Sbjct: 74  --LDPLEFEKQIGIPKPDSAKELIFYCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVS 131

Query: 364 QPDTPVE 370
                ++
Sbjct: 132 HGGDKLD 138

>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae} Length = 139

 Score = 46.7 bits (111), Expect = 9e-07
 Identities = 20/130 (15%), Positives = 40/130 (30%), Gaps = 18/130 (13%)

Query: 76  PVVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT 133
              S + +   +   +P++ ++D         R P  EY + HIP ++        D   
Sbjct: 23  QSYSFEDMKRIVGKHDPNVVLVDV--------REP-SEYSIVHIPASINVPYRSHPDA-- 71

Query: 134 NLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGL 193
                      F   +     ++   L+ Y   G         +    G+    +  G +
Sbjct: 72  ----FALDPLEFEKQIGIPKPDSAKELIFYCASGK-RGGEAQKVASSHGYSNTSLYPGSM 126

Query: 194 PRWRASGYDV 203
             W + G D 
Sbjct: 127 NDWVSHGGDK 136

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Length = 474

 Score = 55.8 bits (134), Expect = 1e-08
 Identities = 45/283 (15%), Positives = 81/283 (28%), Gaps = 45/283 (15%)

Query: 99  WYMPDEQRNPFQEYQVAHIPGA-LFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENK 157
           W +  +  + F +  +A  P A ++F    + ++                         +
Sbjct: 225 WALQHKDEDAFVQALLAGQPEAPIYFARMKLVNKVGPRLLAELGAPERVDLPPERVRAWR 284

Query: 158 DGLVVYD-------GKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGD 210
           +G VV D        K   + +      + F     W+L    P           + + D
Sbjct: 285 EGGVVLDVRPADAFAKRHLAGSLNIPWNKSFVTWAGWLLPADRPIH----LLAADAIAPD 340

Query: 211 AILKASAASEAIEKVYQGQVVGPTTFQTKFQPH---LIWTLEQVKRNIEEGTYQLVDARS 267
            I      S  I+ V           +            + ++V+  + +    L+D R+
Sbjct: 341 VIRAL--RSIGIDDVV-DWTDPAAVDRAAPDDVASYANVSPDEVRGALAQQGLWLLDVRN 397

Query: 268 KARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVV 327
              +             GH+P +  IP               +L        +  +  V 
Sbjct: 398 VDEWA-----------GGHLPQAHHIPL-------------SKLAAHIHD--VPRDGSVC 431

Query: 328 TACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE 370
             C TG  + I A  L   G  DV    G +  W      PVE
Sbjct: 432 VYCRTGGRSAIAASLLRAHGVGDVRNMVGGYEAW-RGKGFPVE 473

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Length = 474

 Score = 46.5 bits (110), Expect = 7e-06
 Identities = 32/149 (21%), Positives = 49/149 (32%), Gaps = 31/149 (20%)

Query: 58  LAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHI 117
                  D +          VS D +   L +  L +LD         RN   E+   H+
Sbjct: 356 WTDPAAVDRAAPDDVASYANVSPDEVRGALAQQGLWLLDV--------RNV-DEWAGGHL 406

Query: 118 PGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDG-LVVYDGKGIFSAARVWW 176
           P A    +  +A    ++P                    +DG + VY   G   +A    
Sbjct: 407 PQAHHIPLSKLAAHIHDVP--------------------RDGSVCVYCRTG-GRSAIAAS 445

Query: 177 MFRVFGHDRVWVLDGGLPRWRASGYDVES 205
           + R  G   V  + GG   WR  G+ VE+
Sbjct: 446 LLRAHGVGDVRNMVGGYEAWRGKGFPVEA 474

>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1 Length = 152

 Score = 51.9 bits (124), Expect = 2e-08
 Identities = 24/146 (16%), Positives = 49/146 (33%), Gaps = 32/146 (21%)

Query: 67  STLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVD 126
           S ++++     ++   L    R P++ ++D         R+  +     HI G+L +   
Sbjct: 19  SHMAMARSISYITSTQLLPLHRRPNIAIIDV--------RDE-ERNYDGHIAGSLHYASG 69

Query: 127 GVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVY-DGKGIFSAARVWWMFRV----- 180
              D+ ++L   +                +KD LV +     +        +        
Sbjct: 70  SFDDKISHLVQNVK---------------DKDTLVFHSALSQVRGPTCARRLVNYLDEKK 114

Query: 181 --FGHDRVWVLDGGLPRWRASGYDVE 204
              G   + +L+ G   W ASG  V 
Sbjct: 115 EDTGIKNIMILERGFNGWEASGKPVC 140

>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1 Length = 152

 Score = 43.4 bits (102), Expect = 2e-05
 Identities = 16/123 (13%), Positives = 32/123 (26%), Gaps = 29/123 (23%)

Query: 247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 306
           T  Q+          ++D R + R              GH+ GS         D      
Sbjct: 31  TSTQLLPLHRRPNIAIIDVRDEERNYD-----------GHIAGSLHYAS-GSFDDK---- 74

Query: 307 PADELKKRFEQEGISLEKPVVTACGTGVT--------ACILALGLNRLGKHDVAVYDGSW 358
               L +  + +    +  V  +  + V            L       G  ++ + +  +
Sbjct: 75  -ISHLVQNVKDK----DTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGF 129

Query: 359 TEW 361
             W
Sbjct: 130 NGW 132

>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A Length = 141

 Score = 50.5 bits (121), Expect = 5e-08
 Identities = 31/143 (21%), Positives = 50/143 (34%), Gaps = 30/143 (20%)

Query: 77  VVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           +     L + L   EP   +LD         R+    Y   HI GA+   ++ + DR ++
Sbjct: 1   MSDAHVLKSRLEWGEPAFTILDV--------RDR-STYNDGHIMGAMAMPIEDLVDRASS 51

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
               L               +++D + VY      ++  V  + R  G + V  L GGL 
Sbjct: 52  S---LE--------------KSRD-IYVYGAGDEQTSQAVNLL-RSAGFEHVSELKGGLA 92

Query: 195 RWRASGYDVESSASGDAILKASA 217
            W+A G   E          A  
Sbjct: 93  AWKAIGGPTEGIIESRTPAGADD 115

>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A Length = 141

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 19/125 (15%), Positives = 38/125 (30%), Gaps = 28/125 (22%)

Query: 249 EQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 306
             +K  +E G   + ++D R ++ ++            GH+ G+  +P   ++D + + L
Sbjct: 5   HVLKSRLEWGEPAFTILDVRDRSTYN-----------DGHIMGAMAMPIEDLVDRASSSL 53

Query: 307 PADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPD 366
                            + +                L   G   V+   G    W A   
Sbjct: 54  EKS--------------RDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAI-G 98

Query: 367 TPVET 371
            P E 
Sbjct: 99  GPTEG 103

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} Length = 466

 Score = 53.5 bits (128), Expect = 5e-08
 Identities = 20/175 (11%), Positives = 48/175 (27%), Gaps = 34/175 (19%)

Query: 189 LDGGLPRWRASGYDVESSASGDAILKASA--ASEAIEKVYQGQVVGPTTFQTKFQPHLIW 246
            D           + +     +  L       S+A   +          +Q       I 
Sbjct: 321 YDKNFINQIGWYLNYDQ----EINLIGDYHLVSKATHTLQLIGYDDIAGYQLPQSK--IQ 374

Query: 247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 306
           T      +I      ++D R+   ++           +GH+  +  +P            
Sbjct: 375 TRSIHSEDITGNESHILDVRNDNEWN-----------NGHLSQAVHVPH----------- 412

Query: 307 PADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 361
              +L +       +    +   C +G+ + I    L   G H++   +  + + 
Sbjct: 413 --GKLLETDLP--FNKNDVIYVHCQSGIRSSIAIGILEHKGYHNIINVNEGYKDI 463

>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A Length = 144

 Score = 49.4 bits (118), Expect = 1e-07
 Identities = 28/138 (20%), Positives = 48/138 (34%), Gaps = 31/138 (22%)

Query: 88  REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA 147
               + V+D         R+  + Y+  HIP A+            ++P      +    
Sbjct: 30  GYEGIIVVDV--------RDA-EAYKECHIPTAI------------SIPG----NKINED 64

Query: 148 AVSALGLENKDG-LVVY-DGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES 205
               L   +K+  ++ Y  G     A +    F   G   V  L GG+  WR    +VE 
Sbjct: 65  TTKRL---SKEKVIITYCWGPACNGATKAAAKFAQLGFR-VKELIGGIEYWRKENGEVEG 120

Query: 206 SASGDAILKASAASEAIE 223
           +    A L  +   E++E
Sbjct: 121 TLGAKADLFWNMKKESLE 138

>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A Length = 144

 Score = 46.7 bits (111), Expect = 1e-06
 Identities = 22/131 (16%), Positives = 43/131 (32%), Gaps = 31/131 (23%)

Query: 247 TLEQVKRNIEEGT--YQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQT 304
            +  +  +I++G     +VD R    +           +  H+P +  IP  ++ + +  
Sbjct: 19  DIADLSIDIKKGYEGIIVVDVRDAEAY-----------KECHIPTAISIPGNKINEDTTK 67

Query: 305 LLPADELKKRFEQEGISLEKPVVTAC--GTGVTACILALGLNRLGKHDVAVYDGSWTEWG 362
            L  +              K ++T C       A   A    +LG   V    G    W 
Sbjct: 68  RLSKE--------------KVIITYCWGPACNGATKAAAKFAQLG-FRVKELIGGIEYWR 112

Query: 363 AQPDTPVETSS 373
            + +  VE + 
Sbjct: 113 KE-NGEVEGTL 122

>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3 Length = 129

 Score = 48.2 bits (115), Expect = 3e-07
 Identities = 20/124 (16%), Positives = 39/124 (31%), Gaps = 16/124 (12%)

Query: 247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 306
           ++      +  G ++ +D R+   F             GH  G+  +P+     AS    
Sbjct: 21  SVTVAHDLLLAG-HRYLDVRTPEEFS-----------QGHACGAINVPYMN-RGASGMSK 67

Query: 307 PADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPD 366
             D L++            ++  C +G  +      L   G   V    G ++ W     
Sbjct: 68  NTDFLEQVSSH--FGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKN-G 124

Query: 367 TPVE 370
            P +
Sbjct: 125 LPTK 128

>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3 Length = 129

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 25/130 (19%), Positives = 41/130 (31%), Gaps = 18/130 (13%)

Query: 76  PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 135
             VSV   H  L     + LD         R P +E+   H  GA+              
Sbjct: 18  SSVSVTVAHDLLLA-GHRYLDV--------RTP-EEFSQGHACGAINVPYMNRG------ 61

Query: 136 PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR 195
              +     F   VS+   ++ + ++V    G  S      +    G   V  + GG   
Sbjct: 62  ASGMSKNTDFLEQVSSHFGQSDN-IIVGCQSGGRSIKATTDLLHA-GFTGVKDIVGGYSA 119

Query: 196 WRASGYDVES 205
           W  +G   ++
Sbjct: 120 WAKNGLPTKA 129

>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A Length = 108

 Score = 46.5 bits (111), Expect = 6e-07
 Identities = 23/127 (18%), Positives = 36/127 (28%), Gaps = 26/127 (20%)

Query: 247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 306
            +    + ++E    LVD R    F             GH   +  +             
Sbjct: 8   NVADAHQKLQEKEAVLVDIRDPQSFA-----------MGHAVQAFHLTN----------- 45

Query: 307 PADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPD 366
             D L           + PV+  C  G ++   A  L + G   V   DG +  W  Q  
Sbjct: 46  --DTLGAFMRD--NDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFP 101

Query: 367 TPVETSS 373
             V   +
Sbjct: 102 AEVAYGA 108

>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A Length = 108

 Score = 43.4 bits (103), Expect = 7e-06
 Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 32/133 (24%)

Query: 78  VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPH 137
           ++V   H  L+E +  ++D         R+P Q + + H   A     D +     +   
Sbjct: 7   INVADAHQKLQEKEAVLVDI--------RDP-QSFAMGHAVQAFHLTNDTLGAFMRDND- 56

Query: 138 MLPSEEAFAAAVSALGLENKDG-LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
                               D  ++V    G  S           G+D V+ +DGG   W
Sbjct: 57  -------------------FDTPVMVMCYHGNSS-KGAAQYLLQQGYDVVYSIDGGFEAW 96

Query: 197 RASGYDVESSASG 209
           +   +  E +   
Sbjct: 97  QR-QFPAEVAYGA 108

>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A Length = 106

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 19/125 (15%), Positives = 38/125 (30%), Gaps = 28/125 (22%)

Query: 250 QVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLP 307
            +K  +E G   + ++D R ++ ++            GH+ G+  +P   ++D + + L 
Sbjct: 2   VLKSRLEWGEPAFTILDVRDRSTYN-----------DGHIMGAMAMPIEDLVDRASSSLE 50

Query: 308 ADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDT 367
                           + +                L   G   V+   G    W A    
Sbjct: 51  KS--------------RDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAI-GG 95

Query: 368 PVETS 372
           P E  
Sbjct: 96  PTELE 100

>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A Length = 106

 Score = 44.5 bits (106), Expect = 3e-06
 Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 30/125 (24%)

Query: 82  WLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPS 141
            L     EP   +LD         R+    Y   HI GA+   ++ + DR ++    L  
Sbjct: 6   RLEWG--EPAFTILDV--------RDR-STYNDGHIMGAMAMPIEDLVDRASSS---LE- 50

Query: 142 EEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGY 201
                        +++D + VY      ++  V  + R  G + V  L GGL  W+A G 
Sbjct: 51  -------------KSRD-IYVYGAGDEQTSQAVNLL-RSAGFEHVSELKGGLAAWKAIGG 95

Query: 202 DVESS 206
             E  
Sbjct: 96  PTELE 100

>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A* Length = 588

 Score = 49.1 bits (118), Expect = 1e-06
 Identities = 26/119 (21%), Positives = 42/119 (35%), Gaps = 28/119 (23%)

Query: 245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQT 304
                ++ R +E G   L+D R                  G + GS  IP          
Sbjct: 490 TVQWHEIDRIVENG-GYLIDVREPNELK-----------QGMIKGSINIPL--------- 528

Query: 305 LLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA 363
               DEL+ R E+  + ++K +   C  G+   + A  L   G + V   DG +  +G 
Sbjct: 529 ----DELRDRLEE--VPVDKDIYITCQLGMRGYVAARMLMEKG-YKVKNVDGGFKLYGT 580

>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A Length = 124

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 23/118 (19%), Positives = 35/118 (29%), Gaps = 29/118 (24%)

Query: 88  REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA 147
                 VLD         RN   + +   I GA+      +A R   L    P++     
Sbjct: 29  ATGKYVVLDV--------RNAPAQVKKDQIKGAIAMPAKDLATRIGELD---PAKT---- 73

Query: 148 AVSALGLENKDGLVVYDGKGIFS-AARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE 204
                        VVYD  G  +       +    G +  + L G L  W+     +E
Sbjct: 74  ------------YVVYDWTGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLE 118

>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A Length = 124

 Score = 38.5 bits (90), Expect = 6e-04
 Identities = 19/117 (16%), Positives = 31/117 (26%), Gaps = 29/117 (24%)

Query: 256 EEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRF 315
             G Y ++D R+              ++   + G+  +P   +           EL    
Sbjct: 29  ATGKYVVLDVRNAPAQ----------VKKDQIKGAIAMPAKDLATR------IGELDP-- 70

Query: 316 EQEGISLEKPVVTACGTG--VTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE 370
                   K  V    TG         L L   G  +     G+   W      P+E
Sbjct: 71  -------AKTYVVYDWTGGTTLGKTALLVLLSAG-FEAYELAGALEGWKGM-QLPLE 118

>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris} Length = 139

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 20/128 (15%)

Query: 246 WTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ 303
            T        + G     +VD R     +          R G +PGS       ML+   
Sbjct: 24  LTTADAIALHKSGASDVVIVDIRDPREIE----------RDGKIPGSFSCTRG-MLEF-- 70

Query: 304 TLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA 363
                 + +  + +     +K  V  C  G+ + + A     +G   VA  +G +  W  
Sbjct: 71  ----WIDPQSPYAKPIFQEDKKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRD 126

Query: 364 QPDTPVET 371
               P+E 
Sbjct: 127 A-GGPIEA 133

>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major} Length = 152

 Score = 45.8 bits (108), Expect = 3e-06
 Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 28/130 (21%)

Query: 80  VDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHML 139
           V+ L          V+D              +     I  ++            N+P + 
Sbjct: 13  VELLDNPDSLVKAAVIDCRDS----------DRDCGFIVNSI------------NMPTIS 50

Query: 140 PSEEAFAAAVSALGLENKDGLVVYDGK----GIFSAARVWWMFRVFGHD--RVWVLDGGL 193
            +EE +      L  E K+  V +  +        A R     +  G+    V+VL GG 
Sbjct: 51  CTEEMYEKLAKTLFEEKKELAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGW 110

Query: 194 PRWRASGYDV 203
             +     DV
Sbjct: 111 EAFYHMYGDV 120

>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1 Length = 154

 Score = 45.9 bits (108), Expect = 3e-06
 Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 27/140 (19%)

Query: 75  EPVVSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
               +V WL+  L   + ++L  D         R P + Y+ +HI  A+   + G+  R 
Sbjct: 15  AISKTVAWLNEQLELGNERLLLMDC--------R-PQELYESSHIESAINVAIPGIMLRR 65

Query: 133 TN-----LPHMLPSEEAFAAAVSALGLENKDGLVVYD------GKGIFSAARVWWMFRVF 181
                  +  +    E         G    D +V+YD       +     + +  + +  
Sbjct: 66  LQKGNLPVRALFTRGEDRDRFTRRCG---TDTVVLYDESSSDWNENTGGESLLGLLLKKL 122

Query: 182 GHD--RVWVLDGGLPRWRAS 199
             +  R + L+GG  +++A 
Sbjct: 123 KDEGCRAFYLEGGFSKFQAE 142

>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A Length = 85

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 17/102 (16%), Positives = 28/102 (27%), Gaps = 25/102 (24%)

Query: 261 QLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI 320
             +D R   ++           +  HV G+  IP               E+K+R      
Sbjct: 3   HWIDVRVPEQY-----------QQEHVQGAINIPL-------------KEVKERIATAVP 38

Query: 321 SLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWG 362
                V   C  G  +      L+ +G   V    G   +  
Sbjct: 39  DKNDTVKVYCNAGRQSGQAKEILSEMGYTHVEN-AGGLKDIA 79

>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A* Length = 169

 Score = 44.4 bits (104), Expect = 1e-05
 Identities = 22/167 (13%), Positives = 44/167 (26%), Gaps = 23/167 (13%)

Query: 40  THTTLKTSSSQSPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASW 99
           +H     SS +       + +    +     + P E    +   H        +V+D   
Sbjct: 4   SHHHHHHSSGRENLYFQGMDSYSITNVK--YLDPTELHRWMQEGHTTTLREPFQVVDVRG 61

Query: 100 YMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDG 159
                      +Y   HI     +    +      L  +                     
Sbjct: 62  S----------DYMGGHIKDGWHYAYSRLKQDPEYLRELKHRLLE-----KQADGRGALN 106

Query: 160 LVVY----DGKGIFSAARVWWMFRV--FGHDRVWVLDGGLPRWRASG 200
           ++ +      +G  +A  +            R+WVL GG  RW++  
Sbjct: 107 VIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVY 153

>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A* Length = 565

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 18/117 (15%), Positives = 37/117 (31%), Gaps = 29/117 (24%)

Query: 245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQT 304
               +Q+    E+    L+D R+                +G + G+  IP          
Sbjct: 474 PIHFDQIDNLSED--QLLLDVRNPGELQ-----------NGGLEGAVNIPV--------- 511

Query: 305 LLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 361
               DEL+ R  +  +  +K ++     G+   +    L   G +      G +  +
Sbjct: 512 ----DELRDRMHE--LPKDKEIIIFSQVGLRGNVAYRQLVNNG-YRARNLIGGYRTY 561

>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A Length = 153

 Score = 41.8 bits (97), Expect = 7e-05
 Identities = 29/133 (21%), Positives = 47/133 (35%), Gaps = 18/133 (13%)

Query: 76  PVVSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT 133
             +  + L A L     KVL  D+        R PF EY  +HI  A+  +   +  R  
Sbjct: 4   TQIVTERLVALLESGTEKVLLIDS--------R-PFVEYNTSHILEAININCSKLMKRRL 54

Query: 134 NLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVF-------GHDRV 186
               +L +E    +A   + ++    +VVYD      A+     F            + V
Sbjct: 55  QQDKVLITELIQHSAKHKVDIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSV 114

Query: 187 WVLDGGLPRWRAS 199
            +L GG   +   
Sbjct: 115 HLLAGGFAEFSRC 127

>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori} Length = 110

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 17/106 (16%), Positives = 34/106 (32%), Gaps = 22/106 (20%)

Query: 106 RNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDG-LVVYD 164
           R    EY+  H+P A    V+        L                   ++KD  ++++ 
Sbjct: 23  REL-DEYEELHLPNATLISVNDQEKLADFLS------------------QHKDKKVLLHC 63

Query: 165 GKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGD 210
             G  +      M    G+     L+G +  +   G+ +    + D
Sbjct: 64  RAGRRALDAAKSM-HELGYTPY-YLEGNVYDFEKYGFRMVYDDTCD 107

>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori} Length = 110

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 16/119 (13%), Positives = 38/119 (31%), Gaps = 26/119 (21%)

Query: 253 RNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELK 312
             +    + +VD R    ++             H+P +  I               ++ +
Sbjct: 10  EEVNFNDFIVVDVRELDEYE-----------ELHLPNATLISV-------------NDQE 45

Query: 313 KRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET 371
           K  +      +K V+  C  G  A   A  ++ LG     + +G+  ++  +    +  
Sbjct: 46  KLADFLSQHKDKKVLLHCRAGRRALDAAKSMHELGYTPYYL-EGNVYDF-EKYGFRMVY 102

>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4 Length = 157

 Score = 39.7 bits (92), Expect = 4e-04
 Identities = 23/151 (15%), Positives = 50/151 (33%), Gaps = 29/151 (19%)

Query: 65  DYSTLSVSPKEPVVSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALF 122
            +S+  V      ++   L+  + + ++ ++  DA        R   Q+YQ + I  +L 
Sbjct: 9   HHSSGLVPRGSGAITAKELYTMMTDKNISLIIMDA--------R-RMQDYQDSCILHSLS 59

Query: 123 FDVDGVADRTTN--LPHMLPSEEAFAAAVSALGLENKDGLVVYD----GKGIFSAARVWW 176
              + ++   T   +   LP +       +     N + +V+ D     K +     +  
Sbjct: 60  VPEEAISPGVTASWIEAHLPDDS----KDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRS 115

Query: 177 MFRVFGHD--------RVWVLDGGLPRWRAS 199
           +                  VL+GG   W   
Sbjct: 116 LKDALFKWESKTVLRNEPLVLEGGYENWLLC 146

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 5e-04
 Identities = 45/329 (13%), Positives = 93/329 (28%), Gaps = 100/329 (30%)

Query: 21  PQVFTSLLNKKLFYSRPKHTHTTLKTSSSQ---SPCV----M-----SSLAAGRRADYST 68
            QVF      K   SR +  +  L+ +  +   +  V    +     + +A      Y  
Sbjct: 123 NQVFA-----KYNVSRLQP-YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV 176

Query: 69  LSVSPKEPVVSVDWLH-ANLREPD--LKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDV 125
                 +    + WL+  N   P+  L++L    Y  D                      
Sbjct: 177 QCKMDFK----IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTS----------------- 215

Query: 126 DGVADRTTNLPHMLPSEEAFAAAVSALGLEN--KDGLVVYDGKGIFSAARVW--WMFRVF 181
              +D ++N+   +    +  A +  L      ++ L+V           V     +  F
Sbjct: 216 --RSDHSSNIKLRI---HSIQAELRRLLKSKPYENCLLVLLN--------VQNAKAWNAF 262

Query: 182 GHD-RVWVL--DGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQT 238
               ++ +      +           +  S D         E        + +       
Sbjct: 263 NLSCKILLTTRFKQVTD--FLSAATTTHISLDHHSMTLTPDEVKS--LLLKYLD-----C 313

Query: 239 KFQ--PHLIWT-----LEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSK 291
           + Q  P  + T     L  +  +I +G          A +D             HV    
Sbjct: 314 RPQDLPREVLTTNPRRLSIIAESIRDG---------LATWD----------NWKHV---N 351

Query: 292 CIPFPQMLDASQTLLPADELKKRFEQEGI 320
           C     ++++S  +L   E +K F++  +
Sbjct: 352 CDKLTTIIESSLNVLEPAEYRKMFDRLSV 380

>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens} Length = 158

 Score = 39.3 bits (91), Expect = 6e-04
 Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 9/101 (8%)

Query: 108 PFQEYQVAHIPGALFFDVDG--VADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG 165
           PF EY  +HI GA+  +        R       +    +      +        ++VYD 
Sbjct: 42  PFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRIFSKEIIVYDE 101

Query: 166 -----KGIFSAARVWWMFRVFGHD--RVWVLDGGLPRWRAS 199
                  +  +  +  +      +     VL GGL  ++ +
Sbjct: 102 NTNEPSRVMPSQPLHIVLESLKREGKEPLVLKGGLSSFKQN 142

>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4 Length = 157

 Score = 38.5 bits (89), Expect = 8e-04
 Identities = 21/141 (14%), Positives = 45/141 (31%), Gaps = 25/141 (17%)

Query: 73  PKEPVVSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD 130
            ++  ++   L+  + + ++ ++  DA        R   Q+YQ + I  +L   V   A 
Sbjct: 12  KEKGAITAKELYTMMTDKNISLIIMDA--------R-RMQDYQDSCILHSL--SVPEEAI 60

Query: 131 RTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG------------IFSAARVWWMF 178
                   + +     +  +     N + +V+ D                   A   W  
Sbjct: 61  SPGVTASWIEAHLPDDSKDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWES 120

Query: 179 RVFGHDRVWVLDGGLPRWRAS 199
           +    +   VL+GG   W   
Sbjct: 121 KTVLRNEPLVLEGGYENWLLC 141

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	373
3utn_X	327	Thiosulfate sulfurtransferase TUM1; rhodanese-like	100.0
3olh_A	302	MST, 3-mercaptopyruvate sulfurtransferase; structu	100.0
1urh_A	280	3-mercaptopyruvate sulfurtransferase; rhodanese; 2	100.0
1rhs_A	296	Sulfur-substituted rhodanese; transferase, sulfurt	100.0
1e0c_A	271	Rhodanese, sulfurtransferase; sulfur metabolism, t	100.0
3hzu_A	318	Thiosulfate sulfurtransferase SSEA; niaid, ssgcid,	100.0
1uar_A	285	Rhodanese; sulfurtransferase, riken structural gen	100.0
3aay_A	277	Putative thiosulfate sulfurtransferase; sulfurtran	100.0
1okg_A	373	Possible 3-mercaptopyruvate sulfurtransferase; rho	100.0
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	100.0
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	100.0
2eg4_A	230	Probable thiosulfate sulfurtransferase; structural	100.0
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	100.0
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	100.0
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	100.0
3r2u_A	466	Metallo-beta-lactamase family protein; structural	99.97
3d1p_A	139	Putative thiosulfate sulfurtransferase YOR285W; at	99.9
3iwh_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	99.89
3eme_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	99.89
3foj_A	100	Uncharacterized protein; protein SSP1007, structur	99.89
3d1p_A	139	Putative thiosulfate sulfurtransferase YOR285W; at	99.88
1tq1_A	129	AT5G66040, senescence-associated family protein; C	99.88
3gk5_A	108	Uncharacterized rhodanese-related protein TVG08686	99.88
3eme_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	99.87
3foj_A	100	Uncharacterized protein; protein SSP1007, structur	99.87
1gmx_A	108	GLPE protein; transferase, rhodanese, sulfurtransf	99.87
1qxn_A	137	SUD, sulfide dehydrogenase; polysulfide-sulfur tra	99.87
3iwh_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	99.87
3ilm_A	141	ALR3790 protein; rhodanese-like, NSR437H, NESG, st	99.87
2hhg_A	139	Hypothetical protein RPA3614; MCSG, structural gen	99.87
3hzu_A	318	Thiosulfate sulfurtransferase SSEA; niaid, ssgcid,	99.87
1urh_A	280	3-mercaptopyruvate sulfurtransferase; rhodanese; 2	99.86
3hix_A	106	ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q	99.86
3nhv_A	144	BH2092 protein; alpha-beta protein, structural gen	99.86
1gmx_A	108	GLPE protein; transferase, rhodanese, sulfurtransf	99.86
3gk5_A	108	Uncharacterized rhodanese-related protein TVG08686	99.85
1tq1_A	129	AT5G66040, senescence-associated family protein; C	99.85
2k0z_A	110	Uncharacterized protein HP1203; A/B domain, struct	99.85
2fsx_A	148	RV0390, COG0607: rhodanese-related sulfurtransfera	99.85
1qxn_A	137	SUD, sulfide dehydrogenase; polysulfide-sulfur tra	99.85
2hhg_A	139	Hypothetical protein RPA3614; MCSG, structural gen	99.85
1e0c_A	271	Rhodanese, sulfurtransferase; sulfur metabolism, t	99.85
3ilm_A	141	ALR3790 protein; rhodanese-like, NSR437H, NESG, st	99.84
3nhv_A	144	BH2092 protein; alpha-beta protein, structural gen	99.84
3hix_A	106	ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q	99.84
1wv9_A	94	Rhodanese homolog TT1651; CDC25, phosphatase, sulf	99.84
1uar_A	285	Rhodanese; sulfurtransferase, riken structural gen	99.84
2k0z_A	110	Uncharacterized protein HP1203; A/B domain, struct	99.83
3aay_A	277	Putative thiosulfate sulfurtransferase; sulfurtran	99.83
3flh_A	124	Uncharacterized protein LP_1913; alpha-beta protei	99.83
1rhs_A	296	Sulfur-substituted rhodanese; transferase, sulfurt	99.82
3i2v_A	127	Adenylyltransferase and sulfurtransferase MOCS3; r	99.82
3olh_A	302	MST, 3-mercaptopyruvate sulfurtransferase; structu	99.82
2jtq_A	85	Phage shock protein E; solution structure rhodanes	99.82
3flh_A	124	Uncharacterized protein LP_1913; alpha-beta protei	99.82
1t3k_A	152	Arath CDC25, dual-specificity tyrosine phosphatase	99.81
1okg_A	373	Possible 3-mercaptopyruvate sulfurtransferase; rho	99.8
1t3k_A	152	Arath CDC25, dual-specificity tyrosine phosphatase	99.8
2fsx_A	148	RV0390, COG0607: rhodanese-related sulfurtransfera	99.8
1wv9_A	94	Rhodanese homolog TT1651; CDC25, phosphatase, sulf	99.8
1vee_A	134	Proline-rich protein family; hypothetical protein,	99.79
3g5j_A	134	Putative ATP/GTP binding protein; N-terminal domai	99.78
3i2v_A	127	Adenylyltransferase and sulfurtransferase MOCS3; r	99.77
3g5j_A	134	Putative ATP/GTP binding protein; N-terminal domai	99.77
2ouc_A	142	Dual specificity protein phosphatase 10; rhodanese	99.76
2vsw_A	153	Dual specificity protein phosphatase 16; hydrolase	99.76
1hzm_A	154	Dual specificity protein phosphatase 6; hydrolase;	99.76
2jtq_A	85	Phage shock protein E; solution structure rhodanes	99.75
4f67_A	265	UPF0176 protein LPG2838; structural genomics, PSI-	99.74
2vsw_A	153	Dual specificity protein phosphatase 16; hydrolase	99.74
1vee_A	134	Proline-rich protein family; hypothetical protein,	99.73
4f67_A	265	UPF0176 protein LPG2838; structural genomics, PSI-	99.73
2ouc_A	142	Dual specificity protein phosphatase 10; rhodanese	99.72
2j6p_A	152	SB(V)-AS(V) reductase; arsenate reductase, antimon	99.72
1hzm_A	154	Dual specificity protein phosphatase 6; hydrolase;	99.72
3utn_X	327	Thiosulfate sulfurtransferase TUM1; rhodanese-like	99.72
1qb0_A	211	Protein (M-phase inducer phosphatase 2 (CDC25B));	99.72
1qb0_A	211	Protein (M-phase inducer phosphatase 2 (CDC25B));	99.72
2j6p_A	152	SB(V)-AS(V) reductase; arsenate reductase, antimon	99.72
2a2k_A	175	M-phase inducer phosphatase 2; dual specificity, s	99.72
1c25_A	161	CDC25A; hydrolase, cell cycle phosphatase,dual spe	99.71
2a2k_A	175	M-phase inducer phosphatase 2; dual specificity, s	99.71
2eg4_A	230	Probable thiosulfate sulfurtransferase; structural	99.7
1c25_A	161	CDC25A; hydrolase, cell cycle phosphatase,dual spe	99.7
3f4a_A	169	Uncharacterized protein YGR203W; protein phosphata	99.7
1whb_A	157	KIAA0055; deubiqutinating enzyme, UBPY, structural	99.68
3op3_A	216	M-phase inducer phosphatase 3; structural genomics	99.68
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	99.68
3f4a_A	169	Uncharacterized protein YGR203W; protein phosphata	99.68
3tg1_B	158	Dual specificity protein phosphatase 10; kinase/rh	99.68
3op3_A	216	M-phase inducer phosphatase 3; structural genomics	99.67
3tg1_B	158	Dual specificity protein phosphatase 10; kinase/rh	99.64
2gwf_A	157	Ubiquitin carboxyl-terminal hydrolase 8; protein-p	99.64
3ics_A	588	Coenzyme A-disulfide reductase; pyridine nucleotid	99.61
3ntd_A	565	FAD-dependent pyridine nucleotide-disulphide oxido	99.59
1whb_A	157	KIAA0055; deubiqutinating enzyme, UBPY, structural	99.56
2gwf_A	157	Ubiquitin carboxyl-terminal hydrolase 8; protein-p	99.54
3ntd_A	565	FAD-dependent pyridine nucleotide-disulphide oxido	99.52
3ics_A	588	Coenzyme A-disulfide reductase; pyridine nucleotid	99.47
3r2u_A	466	Metallo-beta-lactamase family protein; structural	99.44
2f46_A	156	Hypothetical protein; structural genomics, joint c	97.44
2f46_A	156	Hypothetical protein; structural genomics, joint c	96.78
4erc_A	150	Dual specificity protein phosphatase 23; alpha bet	91.09
1xri_A	151	AT1G05000; structural genomics, protein structure	89.71
2img_A	151	Dual specificity protein phosphatase 23; DUSP23, V	86.41
1v8c_A	168	MOAD related protein; riken structural genomics/pr	81.82
4erc_A	150	Dual specificity protein phosphatase 23; alpha bet	80.38

>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.9e-59  Score=445.58  Aligned_cols=273  Identities=32%  Similarity=0.627  Sum_probs=235.7

Q ss_pred             CcccHHHHHHhcCCC---CeEEEEeecCCCCCCCCChhhh-hhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHH
Q 017338           76 PVVSVDWLHANLREP---DLKVLDASWYMPDEQRNPFQEY-QVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (373)
Q Consensus        76 ~~is~~~l~~~l~~~---~~~iiDvR~~~~~~~r~~~~ey-~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~  151 (373)
                      .+|||++|.++++.+   .+++||++|+||+..|++..|| ++||||||++++++.+.+..+++++|||++++|++.|+.
T Consensus        28 ~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~~l~~  107 (327)
T 3utn_X           28 DLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAMSN  107 (327)
T ss_dssp             EEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHHHHHH
T ss_pred             cccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHHHHHH
Confidence            489999999998643   4899999999999999998898 679999999999999999999999999999999999999


Q ss_pred             cCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcCccc
Q 017338          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVV  231 (373)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (373)
                      +||+++++|||||+.+...|+|+||+|+++||++|++|||| .+|+++|+|++++.....               .....
T Consensus       108 lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~~~~~~~~---------------~p~p~  171 (327)
T 3utn_X          108 LGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLDSSKVAAF---------------SPYPK  171 (327)
T ss_dssp             TTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCBCCCCSCS---------------CSSCC
T ss_pred             cCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCcccCCccCc---------------CCcCC
Confidence            99999999999999888889999999999999999999987 899999999998753210               00001


Q ss_pred             CCcceeeccCCccccCHHHHHHHhhCC----CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCC-
Q 017338          232 GPTTFQTKFQPHLIWTLEQVKRNIEEG----TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL-  306 (373)
Q Consensus       232 ~~~~~~~~~~~~~~is~~el~~~~~~~----~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~-  306 (373)
                      ....+...+++..+++.+++.+.++++    +++|||+|++++|.|+.++|+.+.+.||||||+|+||.++.+.++.++ 
T Consensus       172 ~~~~~~~~~~~~~v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~~~~  251 (327)
T 3utn_X          172 SHYESSESFQDKEIVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYP  251 (327)
T ss_dssp             CCCCCSCCCHHHHEECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTCCCC
T ss_pred             cccccccccCchheecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCCCCCC
Confidence            112344456677889999999988753    478999999999999999998888899999999999999998776543 


Q ss_pred             -CHHHHHHHHHH------cCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcC
Q 017338          307 -PADELKKRFEQ------EGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       307 -~~~~l~~~~~~------~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~  364 (373)
                       +.+++++.+++      .|++++++||+||++|++|+.++++|+.+||++|++|||||.||..+
T Consensus       252 ~~~e~l~~~l~~~~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r  316 (327)
T 3utn_X          252 EAGEAIHATLEKALKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLK  316 (327)
T ss_dssp             CTTHHHHHHHHHHHHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhccc
Confidence             33555555543      38999999999999999999999999999999999999999999876

>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}

Probab=100.00  E-value=5.7e-57  Score=429.42  Aligned_cols=275  Identities=44%  Similarity=0.862  Sum_probs=249.7

Q ss_pred             CCCCcccHHHHHHhcCCC----CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHH
Q 017338           73 PKEPVVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA  148 (373)
Q Consensus        73 ~~~~~is~~~l~~~l~~~----~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~  148 (373)
                      ...++||++||.++++++    +++||||||++++..|++.++|..||||||+|+|++.+.+....+++++|+.+.|+++
T Consensus        19 ~~~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~~   98 (302)
T 3olh_A           19 YFQSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEY   98 (302)
T ss_dssp             -CCCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHHH
T ss_pred             CCCCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHHH
Confidence            456789999999999875    8999999999998878777899999999999999999888888899999999999999


Q ss_pred             HHHcCCCCCCeEEEEcCC--CCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhh
Q 017338          149 VSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVY  226 (373)
Q Consensus       149 l~~~gi~~~~~VVvy~~~--g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~  226 (373)
                      ++.+|++++++|||||..  +..+|+|++|+|+.+||++|++|+||+.+|+++|+|+++..+                  
T Consensus        99 ~~~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~------------------  160 (302)
T 3olh_A           99 AGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSSGKS------------------  160 (302)
T ss_dssp             HHHTTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CCSCC------------------
T ss_pred             HHHcCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCcccCCC------------------
Confidence            999999999999999963  566799999999999999999999999999999999998743                  


Q ss_pred             cCcccCCcceeeccCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCC
Q 017338          227 QGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL  306 (373)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~  306 (373)
                         .+.+.+|....++..+++.+++.+.+++++++|||||++.||.|+.++|....+.||||||+|+|+.++.+..+.++
T Consensus       161 ---~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~~~~~~~  237 (302)
T 3olh_A          161 ---QPAPAEFRAQLDPAFIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEK  237 (302)
T ss_dssp             ---CCCCCCCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBCSSSCBC
T ss_pred             ---CcCcCccccccCccceecHHHHHHhhcCCCcEEEecCCHHHccccccCCCcCCcCccCCCceecCHHHhcCCCCccC
Confidence               22346777788899999999999999878899999999999999988887777899999999999999988888899


Q ss_pred             CHHHHHHHHHHcCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCC
Q 017338          307 PADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPV  369 (373)
Q Consensus       307 ~~~~l~~~~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv  369 (373)
                      +.+++++.+.+.+++++++||+||++|.||+.++.+|+.+||++|++|+|||.+|..+ ++|.
T Consensus       238 ~~~~l~~~~~~~~~~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~-~~P~  299 (302)
T 3olh_A          238 SPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMR-ARPE  299 (302)
T ss_dssp             CHHHHHHHHHHTTCCTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHH-HCCC
T ss_pred             CHHHHHHHHHhcCCCCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhc-cCCC
Confidence            9999999999999999999999999999999999999999999999999999999998 7875

>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2

Probab=100.00  E-value=3.5e-55  Score=412.66  Aligned_cols=276  Identities=40%  Similarity=0.808  Sum_probs=236.2

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCC-CCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQ-RNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~-r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      .++||++||.+++++++++||||||+.++.. |++..+|..||||||+|+|+..+.+....+++++|+.+.|++.++.+|
T Consensus         3 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~g   82 (280)
T 1urh_A            3 TWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELG   82 (280)
T ss_dssp             CCEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTT
T ss_pred             CceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHHHcC
Confidence            4689999999999887899999998876543 345679999999999999999888777778899999999999999999


Q ss_pred             CCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcCcccCC
Q 017338          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP  233 (373)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (373)
                      ++++++|||||..|.+.+++++|+|+.+||++|++|+||+.+|+++|+|+++..+                     .+.+
T Consensus        83 i~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~---------------------~~~~  141 (280)
T 1urh_A           83 VNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAV---------------------ELPE  141 (280)
T ss_dssp             CCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCC---------------------CCCC
T ss_pred             CCCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcccCCCC---------------------CCCC
Confidence            9999999999998877699999999999999999999999999999999998753                     1234


Q ss_pred             cceeeccCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHH
Q 017338          234 TTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKK  313 (373)
Q Consensus       234 ~~~~~~~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~  313 (373)
                      .+|....++...|+.+++.+++++++++|||||++.||.|..+++....+.||||||+|||+.++.+ ++.+++.+++++
T Consensus       142 ~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~-~~~~~~~~~l~~  220 (280)
T 1urh_A          142 GEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR-EGELKTTDELDA  220 (280)
T ss_dssp             CCCCCCCCGGGBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBS-SSSBCCHHHHHH
T ss_pred             CccccccCcccEEcHHHHHHHhcCCCcEEEeCCchhhcccccCCCCCCCcCccCCCceEeeHHHhhc-CCccCCHHHHHH
Confidence            5777788888999999999999877899999999999999887776656799999999999999887 677899999999


Q ss_pred             HHHHcCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          314 RFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       314 ~~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      .+.+.+++++++||+||++|.||+.++..|+.+||+||++|+|||.+|....++|+++.
T Consensus       221 ~~~~~~~~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~~  279 (280)
T 1urh_A          221 IFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPV  279 (280)
T ss_dssp             HHHTTTCCSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC------------
T ss_pred             HHHHcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCceec
Confidence            99988999999999999999999999999999999999999999999998669999874

>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A

Probab=100.00  E-value=6.6e-55  Score=414.10  Aligned_cols=277  Identities=44%  Similarity=0.795  Sum_probs=247.4

Q ss_pred             CCCcccHHHHHHhcCC----CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHH
Q 017338           74 KEPVVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV  149 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~----~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l  149 (373)
                      ..++|+++||++++++    ++++||||||++++ .+++..+|..||||||+|+|+..+.+......+++|+.+.|++.+
T Consensus         6 ~~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~-~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l   84 (296)
T 1rhs_A            6 YRALVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYV   84 (296)
T ss_dssp             CCSEECHHHHHHHHHTTCCBTTEEEEECCCCCTT-SCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHH
T ss_pred             cCceeeHHHHHHHHhccccCCCeEEEEecccCcC-CcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHHH
Confidence            3678999999999976    58999999988877 455568999999999999999988776666789999999999999


Q ss_pred             HHcCCCCCCeEEEEcCC--CCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhc
Q 017338          150 SALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQ  227 (373)
Q Consensus       150 ~~~gi~~~~~VVvy~~~--g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~  227 (373)
                      +.++++++++|||||..  |.+.+++++|+|+.+||++|++|+||+.+|+++|+|+++..+                   
T Consensus        85 ~~lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~-------------------  145 (296)
T 1rhs_A           85 GSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPS-------------------  145 (296)
T ss_dssp             HHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSCC-------------------
T ss_pred             HHcCCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCccccCCC-------------------
Confidence            99999999999999998  777799999999999999999999999999999999998753                   


Q ss_pred             CcccCCcceeeccCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCC-CCCcccCCCCcccCcccccccCCCCC
Q 017338          228 GQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLL  306 (373)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~-~~~~GhIpGA~~ip~~~l~~~~~~~~  306 (373)
                        ...+.+|..+.+....++.+++.+++++++.+|||||++.||.|..+++.. ..+.||||||+|||+.++.+.++.++
T Consensus       146 --~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~~~~~~~  223 (296)
T 1rhs_A          146 --RPEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEK  223 (296)
T ss_dssp             --CCCCCCCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCBC
T ss_pred             --CCCCCCcccCCCcceEEcHHHHHHHhcCCCceEEeCCchhhcccccCCcccCCCcCccCCCCEeecHHHhcCCCCcCC
Confidence              123457777778888999999999988778999999999999998776653 33689999999999999988778899


Q ss_pred             CHHHHHHHHHHcCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          307 PADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       307 ~~~~l~~~~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +.+++++.+.+.+++++++||+||++|.||+.++..|+.+||++|++|+|||.+|....++|++++
T Consensus       224 ~~~~l~~~~~~~~~~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~  289 (296)
T 1rhs_A          224 SPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVS  289 (296)
T ss_dssp             CHHHHHHHHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEB
T ss_pred             CHHHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCcccC
Confidence            999999999988899999999999999999999999999999999999999999998448999865

>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X

Probab=100.00  E-value=3.6e-53  Score=396.93  Aligned_cols=264  Identities=28%  Similarity=0.468  Sum_probs=236.3

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 017338           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi  154 (373)
                      .+.|+++||.+++++++++|||||         +..+|..||||||+|+|+..+.......++++|+.+.|+++++.+|+
T Consensus         8 ~~~is~~~l~~~l~~~~~~iiDvR---------~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi   78 (271)
T 1e0c_A            8 PLVIEPADLQARLSAPELILVDLT---------SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGH   78 (271)
T ss_dssp             CSEECHHHHHTTTTCTTEEEEECS---------CHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTC
T ss_pred             CceeeHHHHHHhccCCCeEEEEcC---------CcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCC
Confidence            457999999999987789999996         45899999999999999999887767788999999999999999999


Q ss_pred             CCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcCcccCCc
Q 017338          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT  234 (373)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (373)
                      +++++|||||..|..++.+++|.|+.+||++|++|+||+.+|+++|+|+++..+                     .+.+.
T Consensus        79 ~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~~~~---------------------~~~~~  137 (271)
T 1e0c_A           79 RPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELP---------------------APAGG  137 (271)
T ss_dssp             CTTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCC---------------------CCCCS
T ss_pred             CCCCeEEEEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccCCCC---------------------CCCCC
Confidence            999999999998875699999999999999999999999999999999998753                     12346


Q ss_pred             ceeeccCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHH
Q 017338          235 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKR  314 (373)
Q Consensus       235 ~~~~~~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~  314 (373)
                      +|....+....|+.+++.+++++++++|||+|++.||.|....+   .+.||||||+|+|+.++.+..+.++..+++++.
T Consensus       138 ~~~~~~~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~g~~~~~---~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~  214 (271)
T 1e0c_A          138 PVALSLHDEPTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLA---AKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGR  214 (271)
T ss_dssp             CCCCCCCSTTBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCS---SSCSBCTTCEECCGGGGEEGGGTTEECTTHHHH
T ss_pred             CccccCCccccccHHHHHHHhcCCCcEEEEcCChhhcCCccCCC---CcCCcCCCceeccHHHhCCCCCCCCCHHHHHHH
Confidence            77777777788999999999988889999999999998876554   368999999999999988765444444999999


Q ss_pred             HHHcCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcC
Q 017338          315 FEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  371 (373)
Q Consensus       315 ~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~  371 (373)
                      +.+.+++++++||+||++|.||+.+++.|+.+||++|++|+|||.+|.+..++|+++
T Consensus       215 ~~~~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv~~  271 (271)
T 1e0c_A          215 LEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVEL  271 (271)
T ss_dssp             HHHTTCCTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCBC
T ss_pred             HHHcCCCCCCCEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCCcC
Confidence            998899999999999999999999999999999999999999999999887899975

>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A

Probab=100.00  E-value=4.6e-52  Score=398.26  Aligned_cols=268  Identities=28%  Similarity=0.498  Sum_probs=230.9

Q ss_pred             CCCCCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCccc-ccccCCCCCCCCCCHHHHHHH
Q 017338           70 SVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDG-VADRTTNLPHMLPSEEAFAAA  148 (373)
Q Consensus        70 ~~~~~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~-l~~~~~~~~~~l~~~e~~~~~  148 (373)
                      ..+....+||++||.+++++++++|||||        ++.++|..||||||+|+|+.. +.+   ...+++|++++|++.
T Consensus        34 ~~~~~~~~is~~~l~~~l~~~~~~iiDvR--------~~~e~y~~gHIpGAi~ip~~~~~~~---~~~~~~~~~~~~~~~  102 (318)
T 3hzu_A           34 AYAHPERLVTADWLSAHMGAPGLAIVESD--------EDVLLYDVGHIPGAVKIDWHTDLND---PRVRDYINGEQFAEL  102 (318)
T ss_dssp             TSSSGGGEECHHHHHHHTTCTTEEEEECC--------SSTTSGGGCBCTTEEECCHHHHHBC---SSSSSBCCHHHHHHH
T ss_pred             hcCCCCceecHHHHHHhccCCCEEEEECC--------CChhHHhcCcCCCCeEeCchhhhcc---CcccCCCCHHHHHHH
Confidence            34455678999999999988889999996        443459999999999999864 322   235789999999999


Q ss_pred             HHHcCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcC
Q 017338          149 VSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQG  228 (373)
Q Consensus       149 l~~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~  228 (373)
                      ++.+|++++++|||||..|..++++++|+|+.+||++|++|+||+.+|+++|+|+++..+                    
T Consensus       103 l~~lgi~~~~~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~--------------------  162 (318)
T 3hzu_A          103 MDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVP--------------------  162 (318)
T ss_dssp             HHHTTCCTTCEEEEECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCCCC--------------------
T ss_pred             HHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcccCCC--------------------
Confidence            999999999999999998875699999999999999999999999999999999998653                    


Q ss_pred             cccCCcceee--ccCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCC-----CCCCcccCCCCcccCccccccc
Q 017338          229 QVVGPTTFQT--KFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPR-----KGIRSGHVPGSKCIPFPQMLDA  301 (373)
Q Consensus       229 ~~~~~~~~~~--~~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~-----~~~~~GhIpGA~~ip~~~l~~~  301 (373)
                       ...+..|..  ..++.++++.+|+.+.+++.  +|||||++.||.|...++.     .+.+.||||||+|+|+.++.+.
T Consensus       163 -~~~~~~~~~~~~~~~~~~i~~~el~~~l~~~--~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~~~  239 (318)
T 3hzu_A          163 -TKTCTGYPVVQRNDAPIRAFRDDVLAILGAQ--PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADE  239 (318)
T ss_dssp             -CCCCCCCCCCCCCCTTTBCCHHHHHHHTTTS--CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBCT
T ss_pred             -CCCCCccccccCCCccccccHHHHHHhhcCC--eEEecCCHHHhcccccCccccccccCCcCcCCCCeeecCHHHhcCC
Confidence             123445655  35777899999999998764  8999999999988654432     2345699999999999999988


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCCcEEEEcCCchHHHHHHHHHHH-cCCCCceeecccHHHHhcCCCCCCcCCC
Q 017338          302 SQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWGAQPDTPVETSS  373 (373)
Q Consensus       302 ~~~~~~~~~l~~~~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~~-~G~~~v~~~~GG~~~W~~~~g~Pv~~~~  373 (373)
                      ++.|++.++|++.+  .+++++++||+||++|.||+.++..|+. +||++|++|+|||.+|.+..++|+++++
T Consensus       240 ~g~~~~~~~l~~~~--~~l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~Pv~~g~  310 (318)
T 3hzu_A          240 SGRFRSREELERLY--DFINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGE  310 (318)
T ss_dssp             TSCBCCHHHHHHHT--TTCCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCBCSS
T ss_pred             CCcCCCHHHHHHHh--cCCCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCC
Confidence            89999999999999  4799999999999999999999999997 9999999999999999976699999873

>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2

Probab=100.00  E-value=6.1e-51  Score=384.52  Aligned_cols=271  Identities=30%  Similarity=0.541  Sum_probs=229.5

Q ss_pred             CCCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHH
Q 017338           72 SPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (373)
Q Consensus        72 ~~~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~  151 (373)
                      +++.++|++++|.+++++++++|||||       .++ .+|..||||||+|+|+.....  ....+++|+.+.|.+.+..
T Consensus         4 ~~~~~~is~~~l~~~l~~~~~~liDvR-------~~~-~e~~~ghIpgA~~ip~~~~~~--~~~~~~~~~~~~~~~~~~~   73 (285)
T 1uar_A            4 AHPEVLVSTDWVQEHLEDPKVRVLEVD-------EDI-LLYDTGHIPGAQKIDWQRDFW--DPVVRDFISEEEFAKLMER   73 (285)
T ss_dssp             SCGGGEECHHHHHTTTTCTTEEEEEEC-------SST-THHHHCBCTTCEEECHHHHHB--CSSSSSBCCHHHHHHHHHH
T ss_pred             CCCCceEcHHHHHHhcCCCCEEEEEcC-------CCc-chhhcCcCCCCEECCchhhcc--CCcccCCCCHHHHHHHHHH
Confidence            344578999999999988789999995       234 899999999999999975222  2346789999999999999


Q ss_pred             cCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcCccc
Q 017338          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVV  231 (373)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (373)
                      +|++++++|||||..|.+++++++|+|+.+||++|++|+||+.+|+++|+|+++..+.                     .
T Consensus        74 ~gi~~~~~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~---------------------~  132 (285)
T 1uar_A           74 LGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEVPS---------------------Y  132 (285)
T ss_dssp             TTCCTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCCCC---------------------C
T ss_pred             cCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcccCCCCc---------------------c
Confidence            9999999999999977756999999999999999999999999999999999886531                     1


Q ss_pred             CCcceee-ccCCccccCHHHHHHHhh---CCCcEEEEecCCCccCCCCCC-----CCCCCCcccCCCCcccCcccccccC
Q 017338          232 GPTTFQT-KFQPHLIWTLEQVKRNIE---EGTYQLVDARSKARFDGDAPE-----PRKGIRSGHVPGSKCIPFPQMLDAS  302 (373)
Q Consensus       232 ~~~~~~~-~~~~~~~is~~el~~~~~---~~~~~iIDvR~~~e~~G~~~~-----~~~~~~~GhIpGA~~ip~~~l~~~~  302 (373)
                      .+..|.. ..++..+|+.+++.+.+.   .++..|||+|++.||.|...+     +...++.||||||+|+|+.++.+.+
T Consensus       133 ~~~~~~~~~~~~~~~i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~  212 (285)
T 1uar_A          133 PPGRYEVPYRDESIRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPD  212 (285)
T ss_dssp             CCCCCCCCCCCGGGEECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTT
T ss_pred             cCCCcccccCCcceEEcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCCCccccCHHHhcCCC
Confidence            2345555 556778899999999884   234579999999999775332     2223358999999999999998877


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCCcEEEEcCCchHHHHHHHHHH-HcCCCCceeecccHHHHhcCCCCCCcCCC
Q 017338          303 QTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLN-RLGKHDVAVYDGSWTEWGAQPDTPVETSS  373 (373)
Q Consensus       303 ~~~~~~~~l~~~~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~-~~G~~~v~~~~GG~~~W~~~~g~Pv~~~~  373 (373)
                      +.+++.++|++.+.+.|++++++||+||++|.||+.+++.|+ .+||++|++|+|||.+|....|+|++++.
T Consensus       213 ~~~~~~~~l~~~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g~  284 (285)
T 1uar_A          213 GTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKGE  284 (285)
T ss_dssp             SCBCCHHHHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCSC
T ss_pred             CcCCCHHHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCCcccCC
Confidence            889999999999999999999999999999999999999999 99999999999999999844499999874

>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A

Probab=100.00  E-value=9.5e-51  Score=381.67  Aligned_cols=266  Identities=27%  Similarity=0.531  Sum_probs=226.0

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 017338           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi  154 (373)
                      .+.|++++|.+++++++++|||||        ++..+|..||||||+|+|+..+...  ...+++++.+.|++.++.+|+
T Consensus         5 ~~~is~~~l~~~l~~~~~~liDvR--------~~~~ey~~ghIpgA~~ip~~~~~~~--~~~~~~~~~~~~~~~~~~~gi   74 (277)
T 3aay_A            5 DVLVSADWAESNLHAPKVVFVEVD--------EDTSAYDRDHIAGAIKLDWRTDLQD--PVKRDFVDAQQFSKLLSERGI   74 (277)
T ss_dssp             HHEECHHHHHTTTTCTTEEEEEEE--------SSSHHHHHCBSTTCEEEETTTTTBC--SSSSSBCCHHHHHHHHHHHTC
T ss_pred             CceEcHHHHHHHhCCCCEEEEEcC--------CChhhHhhCCCCCcEEecccccccC--CCCCCCCCHHHHHHHHHHcCC
Confidence            457999999999988789999997        3258999999999999999864332  235789999999999999999


Q ss_pred             CCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcCcccCCc
Q 017338          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT  234 (373)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (373)
                      +++++|||||..|.+++.+++|+|+.+||++|++|+||+.+|+++|+|+++..+.                     ..+.
T Consensus        75 ~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~---------------------~~~~  133 (277)
T 3aay_A           75 ANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPVS---------------------RPVT  133 (277)
T ss_dssp             CTTSEEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBCCCCC---------------------CCCC
T ss_pred             CCCCeEEEECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCccccCCCC---------------------cCCC
Confidence            9999999999987767999999999999999999999999999999999887531                     1233


Q ss_pred             ceeec-cCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCC-----CCCCCCcccCCCCcccCcccccccCCCCCCH
Q 017338          235 TFQTK-FQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPE-----PRKGIRSGHVPGSKCIPFPQMLDASQTLLPA  308 (373)
Q Consensus       235 ~~~~~-~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~-----~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~  308 (373)
                      +|... .+..+.++.+++.+++.+++  |||+|++.||.|....     +....+.||||||+|+|+.++.+..+.+++.
T Consensus       134 ~~~~~~~~~~~~~~~~el~~~~~~~~--liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~  211 (277)
T 3aay_A          134 SYTASPPDNTIRAFRDEVLAAINVKN--LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSD  211 (277)
T ss_dssp             CCCCCCCCGGGEECHHHHHHTTTTSE--EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCTTSCBCCH
T ss_pred             CccccCcccchhcCHHHHHHhcCCCC--EEEeCChHHeeeeecccccccccccccCCcCCCceecCHHHhcCCCCcCCCH
Confidence            45432 34556789999999887654  9999999999764211     1123356999999999999988878889999


Q ss_pred             HHHHHHHHHcCCCCCCcEEEEcCCchHHHHHHHHHHH-cCCCCceeecccHHHHhcCCCCCCcCCC
Q 017338          309 DELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWGAQPDTPVETSS  373 (373)
Q Consensus       309 ~~l~~~~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~~-~G~~~v~~~~GG~~~W~~~~g~Pv~~~~  373 (373)
                      ++|++.+.+.+++++++||+||++|.||+.+++.|+. +||+||++|+|||.+|.+..|+|++++.
T Consensus       212 ~~l~~~~~~~~~~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g~  277 (277)
T 3aay_A          212 EELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELGS  277 (277)
T ss_dssp             HHHHHHHHHHTCCTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCCC
T ss_pred             HHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCCCccCC
Confidence            9999999988999999999999999999999999995 9999999999999999994499999874

>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3

Probab=100.00  E-value=1.7e-49  Score=387.89  Aligned_cols=263  Identities=26%  Similarity=0.506  Sum_probs=215.1

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCccc-cccc--CCCCCCCCCCHHHHHHHHHH
Q 017338           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDG-VADR--TTNLPHMLPSEEAFAAAVSA  151 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~-l~~~--~~~~~~~l~~~e~~~~~l~~  151 (373)
                      .+.|+++||++++++  ++|||||+.+++. ++...+|..||||||+|+|+.. +.+.  ...+.+++|+.+.|+++++.
T Consensus        13 ~~~Is~~el~~~l~~--~~iIDvR~~~~~~-~~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~   89 (373)
T 1okg_A           13 KVFLDPSEVADHLAE--YRIVDCRYSLKIK-DHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMA   89 (373)
T ss_dssp             CCEECHHHHTTCGGG--SEEEECCCCSSST-TTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHH
T ss_pred             CcEEcHHHHHHHcCC--cEEEEecCCcccc-ccchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHHHH
Confidence            568999999998876  8999998654422 2235799999999999999986 7654  45578999999999999999


Q ss_pred             cCCCCCCeEEEEc-CCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcCcc
Q 017338          152 LGLENKDGLVVYD-GKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQV  230 (373)
Q Consensus       152 ~gi~~~~~VVvy~-~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (373)
                      ++++++++||||| ..|.+.+++++|+|+.+|| +|++|+||+.+|+++|+|+++..+.                     
T Consensus        90 ~gi~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~~~~~~---------------------  147 (373)
T 1okg_A           90 NGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESGEPS---------------------  147 (373)
T ss_dssp             TTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECSCCC---------------------
T ss_pred             cCCCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcccCCCC---------------------
Confidence            9999999999999 5565645699999999999 9999999999999999999987431                     


Q ss_pred             cCCc-----ceeeccCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCC--CCCCcccCCCCcccCccccc--cc
Q 017338          231 VGPT-----TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPR--KGIRSGHVPGSKCIPFPQML--DA  301 (373)
Q Consensus       231 ~~~~-----~~~~~~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~--~~~~~GhIpGA~~ip~~~l~--~~  301 (373)
                      +.+.     +|....++.++  .+++     +++.+|||+|++.||.|+. +|+  .. ..||||||+|||+.++.  +.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~--~~~v-----~~~~~lIDvR~~~Ef~G~~-~~~~~~~-~~GhIpGAiniP~~~l~~~~~  218 (373)
T 1okg_A          148 SLPRPATHWPFKTAFQHHYL--VDEI-----PPQAIITDARSADRFASTV-RPYAADK-MPGHIEGARNLPYTSHLVTRG  218 (373)
T ss_dssp             SCCCCCCCCCSCSSCCSBCC--GGGS-----CTTCCEEECSCHHHHTCCS-SCCTTCS-SSSCSTTCEECCGGGGEECCS
T ss_pred             cCccccccccccccCChHHH--HHHh-----ccCceEEeCCCHHHccccc-cccccCC-cCccCCCcEEecHHHhhccCC
Confidence            1122     56555555554  4444     4578999999999998876 432  11 28999999999999987  65


Q ss_pred             CCC-CCCHHHHHHHHHHc--CCCC---CCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcC
Q 017338          302 SQT-LLPADELKKRFEQE--GISL---EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  371 (373)
Q Consensus       302 ~~~-~~~~~~l~~~~~~~--gi~~---~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~  371 (373)
                      ++. +++.++|++.+.+.  ++++   +++||+||++|.||+.+++.|+.+||++|++|+|||.+|....++|+++
T Consensus       219 ~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~ivvyC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~  294 (373)
T 1okg_A          219 DGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMR  294 (373)
T ss_dssp             SSCEECCHHHHHHHHHTTCC-----CCCTTSEEECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHH
T ss_pred             CCCccCCHHHHHHHHHhhhcCCCcccCCCCEEEECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCccc
Confidence            666 89999999999987  7888   9999999999999999999999999999999999999998744788764

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A

Probab=100.00  E-value=4.8e-46  Score=369.93  Aligned_cols=270  Identities=29%  Similarity=0.464  Sum_probs=228.7

Q ss_pred             CCCCcccHHHHHHhcC--------CCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHH
Q 017338           73 PKEPVVSVDWLHANLR--------EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEA  144 (373)
Q Consensus        73 ~~~~~is~~~l~~~l~--------~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~  144 (373)
                      .....++++++.++++        +++++|||+|+.      ++ .+|..||||||+|+|+..+...   ..++++++++
T Consensus       121 ~~~~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~------~~-~e~~~ghIpgA~nip~~~~~~~---~~~~~~~~~~  190 (423)
T 2wlr_A          121 HFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWG------AP-KLYLISHIPGADYIDTNEVESE---PLWNKVSDEQ  190 (423)
T ss_dssp             TGGGEECHHHHHHHHTTCCCTTCCSSCEEEEEEESS------SC-SHHHHCBCTTCEEEEGGGTEET---TTTEECCHHH
T ss_pred             CCCcccCHHHHHHHhhccccccccCCCeEEEEecCC------Cc-hhhccCcCCCcEEcCHHHhccC---CCCCCCCHHH
Confidence            3346899999999887        347999999621      34 6899999999999999887542   1367889999


Q ss_pred             HHHHHHHcCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHH
Q 017338          145 FAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEK  224 (373)
Q Consensus       145 ~~~~l~~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~  224 (373)
                      |++.+..+|++++++||+||+.|. +|+++++.|+.+||++|++|+||+.+|...|+|++++.+..              
T Consensus       191 l~~~~~~~gi~~~~~ivvyC~~G~-~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~g~~~~--------------  255 (423)
T 2wlr_A          191 LKAMLAKHGIRHDTTVILYGRDVY-AAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPK--------------  255 (423)
T ss_dssp             HHHHHHHTTCCTTSEEEEECSSHH-HHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBCSSCCC--------------
T ss_pred             HHHHHHHcCCCCCCeEEEECCCch-HHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCcccCCCCC--------------
Confidence            999999999999999999999654 59999999999999999999999999999999999864210              


Q ss_pred             hhcCcccCCcceeec--cCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcc------
Q 017338          225 VYQGQVVGPTTFQTK--FQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFP------  296 (373)
Q Consensus       225 ~~~~~~~~~~~~~~~--~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~------  296 (373)
                           .....+|...  .++..+++.+++.+++++++.+|||+|++.||.|+.+.+....+.||||||+|+|+.      
T Consensus       256 -----~~~~~~~~~~~~~~~~~~i~~~e~~~~l~~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi~ip~~~~~~~~  330 (423)
T 2wlr_A          256 -----VKAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHM  330 (423)
T ss_dssp             -----CCCCCCCSSCSCSCGGGEECHHHHHTTTTCSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCEECCCCSSTTCC
T ss_pred             -----CCCCcCcccccCCChhheecHHHHHHHhcCCCceEEecCchhheeeeccCCCCCCcCCCCCCccccccccccccH
Confidence                 0112345443  456778999999998887789999999999999987765555578999999998875      


Q ss_pred             -cccccCCCCCCHHHHHHHHHHcCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          297 -QMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       297 -~l~~~~~~~~~~~~l~~~~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                       ++.+.++.+++.++|++.+.+.+++++++||+||++|.||+.++..|+.+||+||++|+|||.+|.+..++|++++
T Consensus       331 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~~  407 (423)
T 2wlr_A          331 EDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATG  407 (423)
T ss_dssp             GGGBCTTSSBCCHHHHHHHHHTTTCCTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTTSTTSCEECS
T ss_pred             HHHcCCCCcCCCHHHHHHHHHHcCCCCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhcCCCCCcccC
Confidence             5666678899999999999888899999999999999999999999999999999999999999998559999876

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A

Probab=100.00  E-value=1.3e-45  Score=366.91  Aligned_cols=239  Identities=16%  Similarity=0.193  Sum_probs=201.0

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      ..++||++||.+++++++++|||+|+......+....+|..||||||+|+|++.+         .+|+.++|+++++.+|
T Consensus         2 ~~~~is~~~L~~~l~~~~~~ilD~r~~~~~~~~~~~~~y~~gHIPgAv~~~~~~l---------~lp~~~~f~~~~~~lg   72 (423)
T 2wlr_A            2 ASAELAKPLTLDQLQQQNGKAIDTRPSAFYNGWPQTLNGPSGHELAALNLSASWL---------DKMSTEQLNAWIKQHN   72 (423)
T ss_dssp             --CCCCSCBCHHHHHHTTCEEEECSCHHHHHTCCSSTTCCCSBCTTCEECCGGGG---------GGCCHHHHHHHHHHTT
T ss_pred             CccccCHHHHHHHhCCCCeEEEECCCcccccccccccccccCCCCCCccCCHHHh---------cCCCHHHHHHHHHHcC
Confidence            3468999999999988789999998432111112224788999999999999865         2789999999999999


Q ss_pred             CCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcCcccCC
Q 017338          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP  233 (373)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (373)
                      |+++++||+||+.+  .++|+||+|+.+||++|++|+||+   .++|+ ++...                          
T Consensus        73 i~~~~~vVvy~~~~--~a~r~~w~l~~~G~~~V~vl~Gg~---~~~g~-~~~~~--------------------------  120 (423)
T 2wlr_A           73 LKTDAPVALYGNDK--DVDAVKTRLQKAGLTHISILSDAL---SEPSR-LQKLP--------------------------  120 (423)
T ss_dssp             CCTTSCEEEESCHH--HHHHHHHHHHHTTCCCEEEBTTTT---SCGGG-CBCCT--------------------------
T ss_pred             CCCCCeEEEECCCC--CHHHHHHHHHHcCCceeEeccchh---hcCCC-cccCC--------------------------
Confidence            99999999999864  599999999999999999999985   44555 22111                          


Q ss_pred             cceeeccCCccccCHHHHHHHhh--------CCCcEEEEec--CCCccCCCCCCCCCCCCcccCCCCcccCcccccc-cC
Q 017338          234 TTFQTKFQPHLIWTLEQVKRNIE--------EGTYQLVDAR--SKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLD-AS  302 (373)
Q Consensus       234 ~~~~~~~~~~~~is~~el~~~~~--------~~~~~iIDvR--~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~-~~  302 (373)
                             +...+++.+++.+.++        .++.+|||+|  ++.||           +.||||||+|+|+.++.+ ..
T Consensus       121 -------~~~~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~-----------~~ghIpgA~nip~~~~~~~~~  182 (423)
T 2wlr_A          121 -------HFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLY-----------LISHIPGADYIDTNEVESEPL  182 (423)
T ss_dssp             -------TGGGEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHH-----------HHCBCTTCEEEEGGGTEETTT
T ss_pred             -------CCCcccCHHHHHHHhhccccccccCCCeEEEEecCCCchhh-----------ccCcCCCcEEcCHHHhccCCC
Confidence                   1123578888888776        3478999999  99999           899999999999998865 45


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          303 QTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       303 ~~~~~~~~l~~~~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +.+++.++|++.+.+.|++++++||+||++|.+|+.+++.|+.+||++|++|+|||.+|... ++|++++
T Consensus       183 ~~~~~~~~l~~~~~~~gi~~~~~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~-g~pv~~g  251 (423)
T 2wlr_A          183 WNKVSDEQLKAMLAKHGIRHDTTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDA-GLPVERG  251 (423)
T ss_dssp             TEECCHHHHHHHHHHTTCCTTSEEEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHT-TCCCBCS
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCeEEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhC-CCCcccC
Confidence            78999999999999999999999999999999999999999999999999999999999988 9999875

>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A

Probab=100.00  E-value=3e-44  Score=328.69  Aligned_cols=224  Identities=25%  Similarity=0.427  Sum_probs=189.0

Q ss_pred             CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcc--cccccCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEEcCCC
Q 017338           90 PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVD--GVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG  167 (373)
Q Consensus        90 ~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~--~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~~~~VVvy~~~g  167 (373)
                      ++++|||+|         +..+|..||||||+|+|+.  .+.  .....+++|+.+.|++.++.+++  +++||+||..|
T Consensus         5 ~~~~iiDvR---------~~~ey~~ghIpgAi~ip~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~--~~~ivvyc~~g   71 (230)
T 2eg4_A            5 EDAVLVDTR---------PRPAYEAGHLPGARHLDLSAPKLR--LREEAELKALEGGLTELFQTLGL--RSPVVLYDEGL   71 (230)
T ss_dssp             TTCEEEECS---------CHHHHHHCBCTTCEECCCCSCCCC--CCSHHHHHHHHHHHHHHHHHTTC--CSSEEEECSSS
T ss_pred             CCEEEEECC---------ChhhHhhCcCCCCEECCccchhcc--cCCCCCcCCCHHHHHHHHHhcCC--CCEEEEEcCCC
Confidence            478999996         4589999999999999998  554  22334667778899999999987  78999999987


Q ss_pred             CchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcCcccCCcceeeccCCccccC
Q 017338          168 IFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWT  247 (373)
Q Consensus       168 ~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is  247 (373)
                      ..++.+++|+|+ +||++|++|+||   |++  +|+++..+                     .+.+.+|....++..+++
T Consensus        72 ~~~s~~a~~~L~-~G~~~v~~l~GG---W~~--~p~~~~~~---------------------~~~~~~~~~~~~~~~~i~  124 (230)
T 2eg4_A           72 TSRLCRTAFFLG-LGGLEVQLWTEG---WEP--YATEKEEP---------------------KPERTEVVAKLRRDWLLT  124 (230)
T ss_dssp             CHHHHHHHHHHH-HTTCCEEEECSS---CGG--GCCBCSCC---------------------CCCCCCCCCCCCGGGBCC
T ss_pred             CccHHHHHHHHH-cCCceEEEeCCC---Ccc--CcccCCCC---------------------CcccccceecCCccceeC
Confidence            756999999999 999999999999   987  88877643                     123456777778888999


Q ss_pred             HHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCcEE
Q 017338          248 LEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVV  327 (373)
Q Consensus       248 ~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~Iv  327 (373)
                      .+++.+     +.+|||+|++.||.+...+|. ..+.||||||+|+|+.++.+..          +++.+.+++++++||
T Consensus       125 ~~e~~~-----~~~liDvR~~~e~~~~~~~~~-~~~~ghIpgA~~ip~~~~~~~~----------e~~~~~~~~~~~~iv  188 (230)
T 2eg4_A          125 ADEAAR-----HPLLLDVRSPEEFQGKVHPPC-CPRGGRIPGSKNAPLELFLSPE----------GLLERLGLQPGQEVG  188 (230)
T ss_dssp             HHHHHT-----CSCEEECSCHHHHTTSCCCTT-SSSCCBCTTCEECCGGGGGCCT----------THHHHHTCCTTCEEE
T ss_pred             HHHHhh-----CCeEEeCCCHHHcCcccCCCC-CccCCCCCCcEEcCHHHhCChH----------HHHHhcCCCCCCCEE
Confidence            999876     678999999999988665553 4467999999999999886542          145555799999999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcC
Q 017338          328 TACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  371 (373)
Q Consensus       328 vyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~  371 (373)
                      +||++|.||+.++..|+.+| ++|++|+|||.+|.+. |+|+++
T Consensus       189 ~~C~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~-g~p~~~  230 (230)
T 2eg4_A          189 VYCHSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQE-GLPTEP  230 (230)
T ss_dssp             EECSSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHT-TCCCBC
T ss_pred             EEcCChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhc-CCCCCC
Confidence            99999999999999999999 8999999999999999 999975

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}

Probab=100.00  E-value=1.2e-40  Score=335.62  Aligned_cols=253  Identities=21%  Similarity=0.260  Sum_probs=200.2

Q ss_pred             chhhhhhhhccccccCCCCcc--------cccccCCCcchhhh-hhhhcccccCCCCCC--CCCCCCcccHHHHHHhcCC
Q 017338           21 PQVFTSLLNKKLFYSRPKHTH--------TTLKTSSSQSPCVM-SSLAAGRRADYSTLS--VSPKEPVVSVDWLHANLRE   89 (373)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~is~~~l~~~l~~   89 (373)
                      ....+|+..+|.+||.+...+        ....+.   .|... .....+.. +.....  .....+.|+++||.+++++
T Consensus       211 ~~~~sti~~e~~~n~~l~~~~~~~f~~~~~~~~~~---~p~~~~~~~~~N~~-G~~~~~~~~~~~~~~is~~~l~~~l~~  286 (474)
T 3tp9_A          211 AVPSSTVGYEKLVNWALQHKDEDAFVQALLAGQPE---APIYFARMKLVNKV-GPRLLAELGAPERVDLPPERVRAWREG  286 (474)
T ss_dssp             BSSCEEHHHHHHHCGGGTCCCHHHHHHHHHTTCCC---CCTTHHHHHHHHHH-CCCCHHHHCCCEECCCCGGGHHHHHHT
T ss_pred             CCcCCCHHHHHHhChhcCcCCHHHHHHHHhcCCCC---CCccHHHHHhhhcc-CcccccccccCCCceeCHHHHHHHhCC
Confidence            347899999999999987332        111111   11111 11111211 111110  1123457999999999987


Q ss_pred             CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEEcCCCCc
Q 017338           90 PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIF  169 (373)
Q Consensus        90 ~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~~~~VVvy~~~g~~  169 (373)
                       + +|||+|         +.++|..||||||+|+|++.                .|+++++.++ +++++||+||..+. 
T Consensus       287 -~-~iiD~R---------~~~~y~~ghIpGA~~i~~~~----------------~~~~~~~~l~-~~~~~vvvy~~~~~-  337 (474)
T 3tp9_A          287 -G-VVLDVR---------PADAFAKRHLAGSLNIPWNK----------------SFVTWAGWLL-PADRPIHLLAADAI-  337 (474)
T ss_dssp             -S-EEEECS---------CHHHHHHSEETTCEECCSST----------------THHHHHHHHC-CSSSCEEEECCTTT-
T ss_pred             -C-EEEECC---------ChHHHhccCCCCeEEECcch----------------HHHHHHHhcC-CCCCeEEEEECCCc-
Confidence             4 999996         56899999999999999874                3777888888 88999999999765 


Q ss_pred             hHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcCcccCCcceeeccCCccccCHH
Q 017338          170 SAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLE  249 (373)
Q Consensus       170 ~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~  249 (373)
                       +++++|+|+.+||++|+++.+|+.+|+++|+++++..                                     .++.+
T Consensus       338 -~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~~~~-------------------------------------~i~~~  379 (474)
T 3tp9_A          338 -APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASYA-------------------------------------NVSPD  379 (474)
T ss_dssp             -HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEECCE-------------------------------------EECHH
T ss_pred             -HHHHHHHHHHcCCcceEEecCcHHHHHhccccccccc-------------------------------------ccCHH
Confidence             8889999999999999986569999999988876542                                     36789


Q ss_pred             HHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCcEEEE
Q 017338          250 QVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTA  329 (373)
Q Consensus       250 el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~Ivvy  329 (373)
                      ++.+.+++++.+|||+|++.||           ..||||||+|+|+.++.+.             +.  +++++++||+|
T Consensus       380 ~l~~~~~~~~~~lvDvR~~~e~-----------~~ghIpgA~~ip~~~l~~~-------------~~--~l~~~~~vvv~  433 (474)
T 3tp9_A          380 EVRGALAQQGLWLLDVRNVDEW-----------AGGHLPQAHHIPLSKLAAH-------------IH--DVPRDGSVCVY  433 (474)
T ss_dssp             HHHHTTTTTCCEEEECSCHHHH-----------HHCBCTTCEECCHHHHTTT-------------GG--GSCSSSCEEEE
T ss_pred             HHHHHhcCCCcEEEECCCHHHH-----------hcCcCCCCEECCHHHHHHH-------------Hh--cCCCCCEEEEE
Confidence            9999988778999999999999           7899999999999877543             22  47899999999


Q ss_pred             cCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcC
Q 017338          330 CGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  371 (373)
Q Consensus       330 C~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~  371 (373)
                      |++|.||+.+++.|+.+||++|++|+|||.+|.++ |+|+++
T Consensus       434 C~~G~ra~~a~~~L~~~G~~~v~~~~Gg~~~W~~~-g~p~~~  474 (474)
T 3tp9_A          434 CRTGGRSAIAASLLRAHGVGDVRNMVGGYEAWRGK-GFPVEA  474 (474)
T ss_dssp             CSSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHT-TCCCBC
T ss_pred             CCCCHHHHHHHHHHHHcCCCCEEEecChHHHHHhC-CCCCCC
Confidence            99999999999999999999999999999999999 999985

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2

Probab=100.00  E-value=8.5e-40  Score=334.22  Aligned_cols=227  Identities=19%  Similarity=0.224  Sum_probs=190.8

Q ss_pred             CCcccHHHHHHhcCCC-CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           75 EPVVSVDWLHANLREP-DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~-~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      .+.||++||.+++.++ +++|||||         +..+|..||||||+|+|+..                 |...+..++
T Consensus         6 ~~~is~~~l~~~l~~~~~~~liDvR---------~~~e~~~ghIpgAv~ip~~~-----------------~~~~~~~l~   59 (539)
T 1yt8_A            6 IAVRTFHDIRAALLARRELALLDVR---------EEDPFAQAHPLFAANLPLSR-----------------LELEIHARV   59 (539)
T ss_dssp             CEEECHHHHHHHHHHTCCBEEEECS---------CHHHHTTSBCTTCEECCGGG-----------------HHHHHHHHS
T ss_pred             CcccCHHHHHHHHhCCCCeEEEECC---------CHHHHhcCcCCCCEECCHHH-----------------HHHHHHhhC
Confidence            5679999999998753 79999996         45899999999999999975                 445677788


Q ss_pred             CCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcCcccCC
Q 017338          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP  233 (373)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (373)
                      ++++++|||||..|. ++.+++|+|+.+||++|++|+||+.+|+++|+|++++.+..  .+  ..               
T Consensus        60 ~~~~~~iVvyc~~g~-~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~--~~--~~---------------  119 (539)
T 1yt8_A           60 PRRDTPITVYDDGEG-LAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFRDVNVP--SK--AF---------------  119 (539)
T ss_dssp             CCTTSCEEEECSSSS-HHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCBCSSSHH--HH--HH---------------
T ss_pred             CCCCCeEEEEECCCC-hHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCcccCCcCc--Cc--ch---------------
Confidence            888999999999777 59999999999999999999999999999999999876421  00  00               


Q ss_pred             cceeeccCCccccCHHHHHHHhhC-CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHH
Q 017338          234 TTFQTKFQPHLIWTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELK  312 (373)
Q Consensus       234 ~~~~~~~~~~~~is~~el~~~~~~-~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~  312 (373)
                      .+|.........++++++.+++.+ ++.+|||+|+++||           ..||||||+|+|+.++..            
T Consensus       120 g~~~~~~~~~~~it~~~l~~~l~~~~~~~llDvR~~~e~-----------~~ghIpgA~~ip~~~l~~------------  176 (539)
T 1yt8_A          120 GELVEAERHTPSLAAEEVQALLDARAEAVILDARRFDEY-----------QTMSIPGGISVPGAELVL------------  176 (539)
T ss_dssp             HHHHHHHHCCCEECHHHHHHHHHTTCSEEEEECSCHHHH-----------HHSBCTTCEECCGGGHHH------------
T ss_pred             hhhhhhhcCCCccCHHHHHHHHhCCCCcEEEeCCCHHHH-----------hcCcCCCCEeCCHHHHHH------------
Confidence            112222234457899999999875 56899999999999           789999999999987642            


Q ss_pred             HHHHHcCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCC-ceeecccHHHHhcCCCCCCcCC
Q 017338          313 KRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHD-VAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       313 ~~~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~-v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                       .+.+++++++++||+||++|.+|+.+++.|+.+||++ |+.|.|||.+|... |+|++++
T Consensus       177 -~~~~l~~~~d~~iV~~C~~g~rs~~~~~~L~~~G~~~~v~~l~gG~~~W~~~-g~p~~~~  235 (539)
T 1yt8_A          177 -RVAELAPDPRTRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGTIGWTLA-GQQLEHG  235 (539)
T ss_dssp             -HHHHHCCSTTSEEEEECSSSHHHHHHHHHHHHTTCSSCEEEETTHHHHHHHT-TCCCBCS
T ss_pred             -HHHhhCCCCCCeEEEECCCChHHHHHHHHHHHcCCCcceeeccCCHHHHHhC-CCCceeC
Confidence             2455678999999999999999999999999999999 78999999999988 9999865

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2

Probab=100.00  E-value=1.4e-37  Score=317.95  Aligned_cols=211  Identities=20%  Similarity=0.261  Sum_probs=178.0

Q ss_pred             CcccHHHHHHhcCCC--CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           76 PVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        76 ~~is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      ..|++++|.++++++  +++|||||         +..||..||||||+|+|+..+..                 .+..+.
T Consensus       265 ~~is~~~l~~~~~~~~~~~~liDvR---------~~~ey~~ghIpgAinip~~~l~~-----------------~~~~~~  318 (539)
T 1yt8_A          265 ERLDLAGLAQWQDEHDRTTYLLDVR---------TPEEYEAGHLPGSRSTPGGQLVQ-----------------ETDHVA  318 (539)
T ss_dssp             EEECHHHHHHHHHCTTSCEEEEECS---------CHHHHHHCBCTTCEECCHHHHHH-----------------SHHHHC
T ss_pred             ceECHHHHHHHHhCCCCCeEEEECC---------CHHHHhcCCCCCCEeCCHHHHHH-----------------HHHhhc
Confidence            469999999998653  79999996         45899999999999999876432                 333332


Q ss_pred             CCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecC-CHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcCcccC
Q 017338          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDG-GLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVG  232 (373)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~G-G~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (373)
                      ..++++||+||..|.+ +..+++.|+.+|| +|++|+| |+.+|.++|+|+++.+.                        
T Consensus       319 ~~~~~~ivv~c~~g~r-s~~aa~~L~~~G~-~v~~l~G~G~~~w~~~g~p~~~~~~------------------------  372 (539)
T 1yt8_A          319 SVRGARLVLVDDDGVR-ANMSASWLAQMGW-QVAVLDGLSEADFSERGAWSAPLPR------------------------  372 (539)
T ss_dssp             CSBTCEEEEECSSSSH-HHHHHHHHHHTTC-EEEEECSCCGGGCCBCSSCCCCCCC------------------------
T ss_pred             CCCCCeEEEEeCCCCc-HHHHHHHHHHcCC-eEEEecCCChHHHHHhhccccCCCC------------------------
Confidence            2368999999998765 7777777999999 9999999 99999999999876531                        


Q ss_pred             CcceeeccCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHH
Q 017338          233 PTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELK  312 (373)
Q Consensus       233 ~~~~~~~~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~  312 (373)
                             ......++.+++.+.+.+++.+|||+|++.||           +.||||||+|+|..++             +
T Consensus       373 -------~~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~l-------------~  421 (539)
T 1yt8_A          373 -------QPRADTIDPTTLADWLGEPGTRVLDFTASANY-----------AKRHIPGAAWVLRSQL-------------K  421 (539)
T ss_dssp             -------CCCCCEECHHHHHHHTTSTTEEEEECSCHHHH-----------HHCBCTTCEECCGGGH-------------H
T ss_pred             -------CCcCCccCHHHHHHHhcCCCeEEEEeCCHHHh-----------hcCcCCCchhCCHHHH-------------H
Confidence                   11224689999999998888999999999999           7899999999998654             3


Q ss_pred             HHHHHcCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          313 KRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       313 ~~~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +.+.+  ++++++||+||.+|.||+.+++.|+.+||++|++|+|||.+|.+. |+|++++
T Consensus       422 ~~l~~--l~~~~~ivv~C~sG~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~-g~pv~~~  478 (539)
T 1yt8_A          422 QALER--LGTAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSAWVAA-GLPTEDG  478 (539)
T ss_dssp             HHHHH--HCCCSEEEEECSSSHHHHHHHHHHHHHHCSCEEEETTHHHHHHHT-TCCCBCS
T ss_pred             HHHHh--CCCCCeEEEEeCCChHHHHHHHHHHHcCCCCEEEeCCcHHHHHhC-CCCcccC
Confidence            34443  578999999999999999999999999999999999999999998 9999875

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}

Probab=99.97  E-value=1.5e-31  Score=268.66  Aligned_cols=171  Identities=13%  Similarity=0.198  Sum_probs=63.1

Q ss_pred             CCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEEcCCCC
Q 017338           89 EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGI  168 (373)
Q Consensus        89 ~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~~~~VVvy~~~g~  168 (373)
                      +++++|||+|         +.++|..||||||+|+|+..                .|+.+++.+. +++++||+||+ +.
T Consensus       294 ~~~~~ilD~R---------~~~~y~~gHIpGAv~ip~~~----------------~~~~~~~~~~-~~~~~vvly~~-~~  346 (466)
T 3r2u_A          294 NTNRLTFDLR---------SKEAYHGGHIEGTINIPYDK----------------NFINQIGWYL-NYDQEINLIGD-YH  346 (466)
T ss_dssp             CCCSEEEECS---------CHHHHHHSCCTTCEECCSST----------------THHHHHTTTC-CTTSCEEEESC-HH
T ss_pred             CCCeEEEECC---------CHHHHhhCCCCCcEECCccH----------------HHHHHHHhcc-CCCCeEEEEEC-Cc
Confidence            4589999996         56899999999999999874                3555666554 78999999998 33


Q ss_pred             chHHHHHHHHHHcCCCceEE-ecCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHhhcCcccCCcceeeccCCccccC
Q 017338          169 FSAARVWWMFRVFGHDRVWV-LDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWT  247 (373)
Q Consensus       169 ~~a~ra~~~L~~~G~~~v~~-L~GG~~~W~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is  247 (373)
                       .++++||+|+.+||++|+. ++|+...|...                                              + 
T Consensus       347 -~a~~a~~~L~~~G~~~v~~~l~g~~~~~~~~----------------------------------------------~-  378 (466)
T 3r2u_A          347 -LVSKATHTLQLIGYDDIAGYQLPQSKIQTRS----------------------------------------------I-  378 (466)
T ss_dssp             -HHHHHHHHHHTTTCCCEEEEECCC-------------------------------------------------------
T ss_pred             -hHHHHHHHhhhhhcccccccccCcccccHHH----------------------------------------------H-
Confidence             4999999999999999996 67643222100                                              0 


Q ss_pred             HHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCcEE
Q 017338          248 LEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVV  327 (373)
Q Consensus       248 ~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~Iv  327 (373)
                         +.+++++++.+|||||+++||           ..||||||+|+|+.++.+.             +.  .++++++||
T Consensus       379 ---~~~~~~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~l~~~-------------~~--~l~~~~~iv  429 (466)
T 3r2u_A          379 ---HSEDITGNESHILDVRNDNEW-----------NNGHLSQAVHVPHGKLLET-------------DL--PFNKNDVIY  429 (466)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ---HHHHHhCCCcEEEEeCCHHHH-----------hcCcCCCCEECCHHHHHHH-------------Hh--hCCCCCeEE
Confidence               334445567899999999999           7999999999999876532             22  267899999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhc
Q 017338          328 TACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA  363 (373)
Q Consensus       328 vyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~  363 (373)
                      +||++|.||+.+++.|+.+||++|++|+|||.+|.+
T Consensus       430 ~~C~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~  465 (466)
T 3r2u_A          430 VHCQSGIRSSIAIGILEHKGYHNIINVNEGYKDIQL  465 (466)
T ss_dssp             ------------------------------------
T ss_pred             EECCCChHHHHHHHHHHHcCCCCEEEecChHHHHhh
Confidence            999999999999999999999999999999999975

>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}

Probab=99.90  E-value=3.2e-24  Score=180.47  Aligned_cols=114  Identities=20%  Similarity=0.319  Sum_probs=102.2

Q ss_pred             cccCHHHHHHHhh--CCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCC
Q 017338          244 LIWTLEQVKRNIE--EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  321 (373)
Q Consensus       244 ~~is~~el~~~~~--~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~  321 (373)
                      ..|+++++.++++  +++++|||||++.||           ..||||||+|+|+.++.+  ...++.+++++.+...+++
T Consensus        23 ~~is~~el~~~l~~~~~~~~liDvR~~~e~-----------~~ghIpgAinip~~~l~~--~~~~~~~~~~~~~~~~~~~   89 (139)
T 3d1p_A           23 QSYSFEDMKRIVGKHDPNVVLVDVREPSEY-----------SIVHIPASINVPYRSHPD--AFALDPLEFEKQIGIPKPD   89 (139)
T ss_dssp             EECCHHHHHHHHHHTCTTEEEEECSCHHHH-----------HHCCCTTCEECCTTTCTT--GGGSCHHHHHHHHSSCCCC
T ss_pred             ceecHHHHHHHHhCCCCCeEEEECcCHHHH-----------hCCCCCCcEEcCHHHhhh--hccCCHHHHHHHHhccCCC
Confidence            4689999999886  357999999999999           789999999999998743  3456788999998877889


Q ss_pred             CCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcC
Q 017338          322 LEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  371 (373)
Q Consensus       322 ~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~  371 (373)
                      ++++||+||.+|.||..++..|+.+||++|++|+|||.+|... |+|+..
T Consensus        90 ~~~~ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~-g~p~~~  138 (139)
T 3d1p_A           90 SAKELIFYCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSH-GGDKLD  138 (139)
T ss_dssp             TTSEEEEECSSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHT-TGGGCC
T ss_pred             CCCeEEEECCCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHc-CCCCCC
Confidence            9999999999999999999999999999999999999999999 899864

>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A

Probab=99.89  E-value=5.1e-24  Score=170.10  Aligned_cols=98  Identities=21%  Similarity=0.381  Sum_probs=86.5

Q ss_pred             cCHHHHHHHhhC-CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCC
Q 017338          246 WTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (373)
Q Consensus       246 is~~el~~~~~~-~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~  324 (373)
                      ||++|+++.+.+ ++++|||||++.||           ..||||||+|+|+.++.+...               .+++++
T Consensus         4 Is~~el~~~l~~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~l~~~~~---------------~l~~~~   57 (103)
T 3iwh_A            4 ITTDELKNKLLESKPVQIVDVRTDEET-----------AMGYIPNAKLIPMDTIPDNLN---------------SFNKNE   57 (103)
T ss_dssp             ECHHHHHHGGGSSSCCEEEECSCHHHH-----------TTCBCTTCEECCGGGGGGCGG---------------GCCTTS
T ss_pred             cCHHHHHHHHhCCCCeEEEECCChhHH-----------hcCccCCcccCcccchhhhhh---------------hhcCCC
Confidence            789999988754 46899999999999           789999999999988765322               378899


Q ss_pred             cEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcC
Q 017338          325 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  371 (373)
Q Consensus       325 ~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~  371 (373)
                      +||+||.+|.||..++..|+.+||++ +.+.||+.+|.++ |+|||+
T Consensus        58 ~ivv~C~~G~rS~~aa~~L~~~G~~~-~~l~GG~~~W~~~-g~pves  102 (103)
T 3iwh_A           58 IYYIVCAGGVRSAKVVEYLEANGIDA-VNVEGGMHAWGDE-GLEIKS  102 (103)
T ss_dssp             EEEEECSSSSHHHHHHHHHHTTTCEE-EEETTHHHHHCSS-SCBCCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHcCCCE-EEecChHHHHHHC-CCccee
Confidence            99999999999999999999999964 5789999999999 999986

>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}

Probab=99.89  E-value=7.1e-24  Score=168.27  Aligned_cols=97  Identities=20%  Similarity=0.321  Sum_probs=86.7

Q ss_pred             ccCHHHHHHHhh-CCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCC
Q 017338          245 IWTLEQVKRNIE-EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (373)
Q Consensus       245 ~is~~el~~~~~-~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~  323 (373)
                      .|+++|+.+.+. +++++|||+|++.||           ..||||||+|+|+.++.+...               .++++
T Consensus         3 ~is~~el~~~l~~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~l~~~~~---------------~l~~~   56 (100)
T 3foj_A            3 SITVTELKEKILDANPVNIVDVRTDQET-----------AMGIIPGAETIPMNSIPDNLN---------------YFNDN   56 (100)
T ss_dssp             EECHHHHHHGGGSSSCCEEEECSCHHHH-----------TTCBCTTCEECCGGGGGGCGG---------------GSCTT
T ss_pred             ccCHHHHHHHHhcCCCcEEEECCCHHHH-----------hcCcCCCCEECCHHHHHHHHH---------------hCCCC
Confidence            378899999884 567999999999999           789999999999988764321               36789


Q ss_pred             CcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCC
Q 017338          324 KPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPV  369 (373)
Q Consensus       324 ~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv  369 (373)
                      ++||+||.+|.||..+++.|+.+|| +|++|+|||.+|.++ |+||
T Consensus        57 ~~ivvyC~~g~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~-g~pv  100 (100)
T 3foj_A           57 ETYYIICKAGGRSAQVVQYLEQNGV-NAVNVEGGMDEFGDE-GLEH  100 (100)
T ss_dssp             SEEEEECSSSHHHHHHHHHHHTTTC-EEEEETTHHHHHCSS-SCBC
T ss_pred             CcEEEEcCCCchHHHHHHHHHHCCC-CEEEecccHHHHHHc-CCCC
Confidence            9999999999999999999999999 999999999999998 9996

>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}

Probab=99.88  E-value=8.2e-23  Score=171.82  Aligned_cols=116  Identities=16%  Similarity=0.252  Sum_probs=101.1

Q ss_pred             CCCcccHHHHHHhcC--CCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHH
Q 017338           74 KEPVVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (373)
Q Consensus        74 ~~~~is~~~l~~~l~--~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~  151 (373)
                      ....|+++++.++++  +++++|||||         +..+|..||||||+|+|+..+.+      .+..+++.|.+.+..
T Consensus        21 ~~~~is~~el~~~l~~~~~~~~liDvR---------~~~e~~~ghIpgAinip~~~l~~------~~~~~~~~~~~~~~~   85 (139)
T 3d1p_A           21 NIQSYSFEDMKRIVGKHDPNVVLVDVR---------EPSEYSIVHIPASINVPYRSHPD------AFALDPLEFEKQIGI   85 (139)
T ss_dssp             CCEECCHHHHHHHHHHTCTTEEEEECS---------CHHHHHHCCCTTCEECCTTTCTT------GGGSCHHHHHHHHSS
T ss_pred             CcceecHHHHHHHHhCCCCCeEEEECc---------CHHHHhCCCCCCcEEcCHHHhhh------hccCCHHHHHHHHhc
Confidence            456799999999986  3579999996         45899999999999999998743      345677889988888


Q ss_pred             cCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCccc
Q 017338          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (373)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~  205 (373)
                      .+++++++||+||..|. +|.++++.|+.+||++|++|+||+.+|.++|+|+..
T Consensus        86 ~~~~~~~~ivvyC~~G~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~  138 (139)
T 3d1p_A           86 PKPDSAKELIFYCASGK-RGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD  138 (139)
T ss_dssp             CCCCTTSEEEEECSSSH-HHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred             cCCCCCCeEEEECCCCc-hHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence            88899999999999875 489999999999999999999999999999999753

>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3

Probab=99.88  E-value=1.6e-23  Score=174.03  Aligned_cols=112  Identities=16%  Similarity=0.248  Sum_probs=95.4

Q ss_pred             cccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCC
Q 017338          244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (373)
Q Consensus       244 ~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~  323 (373)
                      ..|+++++.++++ ++++|||||++.||           ..||||||+|||+..+.. .+.+.+.+.+++.+.  .++++
T Consensus        18 ~~is~~e~~~~l~-~~~~lIDvR~~~e~-----------~~ghIpgAinip~~~~~~-~~~~~~~~~~~~~~~--~l~~~   82 (129)
T 1tq1_A           18 SSVSVTVAHDLLL-AGHRYLDVRTPEEF-----------SQGHACGAINVPYMNRGA-SGMSKNTDFLEQVSS--HFGQS   82 (129)
T ss_dssp             EEEEHHHHHHHHH-HTCCEEEESCHHHH-----------HHCCBTTBEECCSCCCST-TTCCCTTTHHHHHTT--TCCTT
T ss_pred             cccCHHHHHHHhc-CCCEEEECCCHHHH-----------hcCCCCCcEECcHhhccc-ccccCCHHHHHHHHh--hCCCC
Confidence            3588999998886 46899999999999           799999999999977643 344555555666554  47889


Q ss_pred             CcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcC
Q 017338          324 KPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  371 (373)
Q Consensus       324 ~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~  371 (373)
                      ++||+||.+|.||..+++.|+.+||+||++|+|||.+|... |+|++.
T Consensus        83 ~~ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~-g~p~~~  129 (129)
T 1tq1_A           83 DNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKN-GLPTKA  129 (129)
T ss_dssp             SSEEEEESSCSHHHHHHHHHHHHHCCSEEEEECCHHHHHHH-TCCCC-
T ss_pred             CeEEEECCCCcHHHHHHHHHHHcCCCCeEEeCCcHHHHHhC-CCCCCC
Confidence            99999999999999999999999999999999999999998 999873

>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}

Probab=99.88  E-value=2.7e-23  Score=167.36  Aligned_cols=98  Identities=19%  Similarity=0.352  Sum_probs=87.4

Q ss_pred             ccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCC
Q 017338          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (373)
Q Consensus       245 ~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~  324 (373)
                      .|+++|+.+++++  ++|||+|++.||           ..||||||+|+|+.++.             +.+.  .+++++
T Consensus         5 ~is~~el~~~l~~--~~iiDvR~~~e~-----------~~ghIpgA~~ip~~~l~-------------~~~~--~l~~~~   56 (108)
T 3gk5_A            5 SINAADLYENIKA--YTVLDVREPFEL-----------IFGSIANSINIPISELR-------------EKWK--ILERDK   56 (108)
T ss_dssp             EECHHHHHHTTTT--CEEEECSCHHHH-----------TTCBCTTCEECCHHHHH-------------HHGG--GSCTTS
T ss_pred             EeCHHHHHHHHcC--CEEEECCCHHHH-----------hcCcCCCCEEcCHHHHH-------------HHHH--hCCCCC
Confidence            4789999998875  999999999999           78999999999996653             3333  368899


Q ss_pred             cEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          325 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       325 ~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +||+||.+|.||..+++.|+.+|| +|++|+|||.+|.++ ++|++++
T Consensus        57 ~ivvyC~~G~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~-~~~~~~~  102 (108)
T 3gk5_A           57 KYAVICAHGNRSAAAVEFLSQLGL-NIVDVEGGIQSWIEE-GYPVVLE  102 (108)
T ss_dssp             CEEEECSSSHHHHHHHHHHHTTTC-CEEEETTHHHHHHHT-TCCCBCC
T ss_pred             eEEEEcCCCcHHHHHHHHHHHcCC-CEEEEcCcHHHHHHc-CCCCCCC
Confidence            999999999999999999999999 999999999999999 9999875

>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}

Probab=99.87  E-value=1.6e-22  Score=160.43  Aligned_cols=98  Identities=17%  Similarity=0.287  Sum_probs=84.3

Q ss_pred             CcccHHHHHHhc-CCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 017338           76 PVVSVDWLHANL-REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (373)
Q Consensus        76 ~~is~~~l~~~l-~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi  154 (373)
                      +.||+++|.+++ .+++++|||||         +.++|..||||||+|+|+..+.+                 .+.  .+
T Consensus         2 ~~is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~l~~-----------------~~~--~l   53 (100)
T 3foj_A            2 ESITVTELKEKILDANPVNIVDVR---------TDQETAMGIIPGAETIPMNSIPD-----------------NLN--YF   53 (100)
T ss_dssp             CEECHHHHHHGGGSSSCCEEEECS---------CHHHHTTCBCTTCEECCGGGGGG-----------------CGG--GS
T ss_pred             CccCHHHHHHHHhcCCCcEEEECC---------CHHHHhcCcCCCCEECCHHHHHH-----------------HHH--hC
Confidence            358999999998 45689999996         45899999999999999988754                 122  24


Q ss_pred             CCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCc
Q 017338          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  203 (373)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv  203 (373)
                      +++++||+||..|. +|.++++.|+.+|| +|++|+||+.+|.++|+||
T Consensus        54 ~~~~~ivvyC~~g~-rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv  100 (100)
T 3foj_A           54 NDNETYYIICKAGG-RSAQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH  100 (100)
T ss_dssp             CTTSEEEEECSSSH-HHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred             CCCCcEEEEcCCCc-hHHHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence            67899999999775 49999999999999 9999999999999999986

>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A

Probab=99.87  E-value=7.3e-23  Score=164.67  Aligned_cols=100  Identities=22%  Similarity=0.313  Sum_probs=88.8

Q ss_pred             ccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCC
Q 017338          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (373)
Q Consensus       245 ~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~  324 (373)
                      .|+++++.+++++++.+|||+|++.||           ..||||||+|+|+.++             .+.+.+  +++++
T Consensus         6 ~i~~~~l~~~~~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~l-------------~~~~~~--l~~~~   59 (108)
T 1gmx_A            6 CINVADAHQKLQEKEAVLVDIRDPQSF-----------AMGHAVQAFHLTNDTL-------------GAFMRD--NDFDT   59 (108)
T ss_dssp             EECHHHHHHHHHTTCCEEEECSCHHHH-----------HHCEETTCEECCHHHH-------------HHHHHH--SCTTS
T ss_pred             ccCHHHHHHHHhCCCCEEEEcCCHHHH-----------HhCCCccCEeCCHHHH-------------HHHHHh--cCCCC
Confidence            478999999988778999999999999           7999999999998654             334443  68899


Q ss_pred             cEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          325 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       325 ~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +||+||.+|.||..+++.|+.+||++|++|+||+.+|...  +|++++
T Consensus        60 ~ivvyc~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~--~p~~~~  105 (108)
T 1gmx_A           60 PVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ--FPAEVA  105 (108)
T ss_dssp             CEEEECSSSSHHHHHHHHHHHHTCSSEEEETTHHHHHHHH--CGGGEE
T ss_pred             CEEEEcCCCchHHHHHHHHHHcCCceEEEecCCHHHHHHh--CCcccc
Confidence            9999999999999999999999999999999999999887  898764

>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3

Probab=99.87  E-value=5.1e-23  Score=172.87  Aligned_cols=105  Identities=20%  Similarity=0.330  Sum_probs=92.2

Q ss_pred             cccCHHHHHHHhh-CCCcEEEEecCCCccCCCCCCCCCCCCc-cc--CCCCcccCcccccccCCCCCCHHHHHHHHHHcC
Q 017338          244 LIWTLEQVKRNIE-EGTYQLVDARSKARFDGDAPEPRKGIRS-GH--VPGSKCIPFPQMLDASQTLLPADELKKRFEQEG  319 (373)
Q Consensus       244 ~~is~~el~~~~~-~~~~~iIDvR~~~e~~G~~~~~~~~~~~-Gh--IpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~g  319 (373)
                      ..|+++++.+++. +++++|||||++.||           .. ||  ||||+|||+..+...           ..+.  +
T Consensus        23 ~~is~~el~~~l~~~~~~~liDVR~~~E~-----------~~~gh~~IpgAinip~~~l~~~-----------~~~~--~   78 (137)
T 1qxn_A           23 VMLSPKDAYKLLQENPDITLIDVRDPDEL-----------KAMGKPDVKNYKHMSRGKLEPL-----------LAKS--G   78 (137)
T ss_dssp             EEECHHHHHHHHHHCTTSEEEECCCHHHH-----------HHTCEECCSSEEECCTTTSHHH-----------HHHH--C
T ss_pred             cccCHHHHHHHHhcCCCeEEEECCCHHHH-----------HhcCCcCCCCCEEcchHHhhhH-----------Hhhc--c
Confidence            3589999999987 667999999999999           77 99  999999999876421           1122  5


Q ss_pred             CCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCCC
Q 017338          320 ISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETSS  373 (373)
Q Consensus       320 i~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~~  373 (373)
                      ++++++||+||.+|.||..+++.|+.+||+||++|+|||.+|..+ |+|++++.
T Consensus        79 l~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~-g~p~~~~~  131 (137)
T 1qxn_A           79 LDPEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEE-GLPSLDRS  131 (137)
T ss_dssp             CCTTSCEEEECCSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHT-TCCEECCC
T ss_pred             CCCCCeEEEEcCCCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHC-CCCccccc
Confidence            889999999999999999999999999999999999999999999 99998763

>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A

Probab=99.87  E-value=2.2e-22  Score=160.58  Aligned_cols=99  Identities=21%  Similarity=0.391  Sum_probs=83.8

Q ss_pred             cccHHHHHHhcCC-CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 017338           77 VVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (373)
Q Consensus        77 ~is~~~l~~~l~~-~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~  155 (373)
                      -||+++|++.+.+ ++++|||||         +..||..||||||+|+|++.+.+                 .+..  ++
T Consensus         3 ~Is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~l~~-----------------~~~~--l~   54 (103)
T 3iwh_A            3 SITTDELKNKLLESKPVQIVDVR---------TDEETAMGYIPNAKLIPMDTIPD-----------------NLNS--FN   54 (103)
T ss_dssp             EECHHHHHHGGGSSSCCEEEECS---------CHHHHTTCBCTTCEECCGGGGGG-----------------CGGG--CC
T ss_pred             CcCHHHHHHHHhCCCCeEEEECC---------ChhHHhcCccCCcccCcccchhh-----------------hhhh--hc
Confidence            4899999998765 469999996         45899999999999999988754                 2222  46


Q ss_pred             CCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCccc
Q 017338          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (373)
Q Consensus       156 ~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~  205 (373)
                      ++++||+||..|.+ |.+++..|+..||++ ..|.||+.+|+++|+|+++
T Consensus        55 ~~~~ivv~C~~G~r-S~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~pves  102 (103)
T 3iwh_A           55 KNEIYYIVCAGGVR-SAKVVEYLEANGIDA-VNVEGGMHAWGDEGLEIKS  102 (103)
T ss_dssp             TTSEEEEECSSSSH-HHHHHHHHHTTTCEE-EEETTHHHHHCSSSCBCCC
T ss_pred             CCCeEEEECCCCHH-HHHHHHHHHHcCCCE-EEecChHHHHHHCCCccee
Confidence            88999999997765 899999999999965 4799999999999999985

>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A

Probab=99.87  E-value=5e-23  Score=173.76  Aligned_cols=102  Identities=17%  Similarity=0.321  Sum_probs=89.2

Q ss_pred             ccCHHHHHHHhhC--CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCC
Q 017338          245 IWTLEQVKRNIEE--GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  322 (373)
Q Consensus       245 ~is~~el~~~~~~--~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~  322 (373)
                      +||++|+.+++.+  ++++|||+|++.||           ..||||||+|+|+.++.+.             +. .++++
T Consensus         1 mIs~~el~~~l~~~~~~~~liDvR~~~e~-----------~~ghIpgAi~ip~~~l~~~-------------~~-~~l~~   55 (141)
T 3ilm_A            1 MSDAHVLKSRLEWGEPAFTILDVRDRSTY-----------NDGHIMGAMAMPIEDLVDR-------------AS-SSLEK   55 (141)
T ss_dssp             -CCHHHHHHHHHHSCSCEEEEECSCHHHH-----------HHCEETTCEECCGGGHHHH-------------HH-TTSCT
T ss_pred             CCCHHHHHHHHhcCCCCEEEEECCCHHHH-----------hCCCCCCCEEcCHHHHHHH-------------HH-hcCCC
Confidence            3788999998874  35899999999999           8999999999999776431             11 25889


Q ss_pred             CCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          323 EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       323 ~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +++||+||.+|.||..+++.|+.+||++|++|+||+.+|.++ |+|++++
T Consensus        56 ~~~ivvyC~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~-g~p~~~~  104 (141)
T 3ilm_A           56 SRDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAI-GGPTEGI  104 (141)
T ss_dssp             TSEEEEECSSHHHHHHHHHHHHHTTCCSEEECTTHHHHHHHT-TCCEEEE
T ss_pred             CCeEEEEECCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHC-CCCcccC
Confidence            999999999999999999999999999999999999999999 9999864

>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}

Probab=99.87  E-value=7.4e-23  Score=171.96  Aligned_cols=110  Identities=19%  Similarity=0.267  Sum_probs=90.0

Q ss_pred             cccCHHHHHHHhh--CCCcEEEEecCCCccCCCCCCCCCCCCc-ccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCC
Q 017338          244 LIWTLEQVKRNIE--EGTYQLVDARSKARFDGDAPEPRKGIRS-GHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI  320 (373)
Q Consensus       244 ~~is~~el~~~~~--~~~~~iIDvR~~~e~~G~~~~~~~~~~~-GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi  320 (373)
                      ..|+++++.+++.  +++++|||||++.||           .. ||||||+|+|+..+.........       ....++
T Consensus        22 ~~is~~~l~~~l~~~~~~~~liDvR~~~e~-----------~~~ghIpgA~~ip~~~l~~~~~~~~~-------~~~~~~   83 (139)
T 2hhg_A           22 ETLTTADAIALHKSGASDVVIVDIRDPREI-----------ERDGKIPGSFSCTRGMLEFWIDPQSP-------YAKPIF   83 (139)
T ss_dssp             EEECHHHHHHHHHTTCTTEEEEECSCHHHH-----------HHHCCCTTCEECCGGGHHHHHCTTST-------TCCGGG
T ss_pred             CccCHHHHHHHHhccCCCeEEEECCCHHHH-----------HhCCCCCCeEECChHHHHHhcCccch-------hhhccC
Confidence            3689999999998  568999999999999           77 99999999999876431100000       001146


Q ss_pred             CCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          321 SLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       321 ~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +++++||+||.+|.||..+++.|+.+||+||++|+|||.+|.++ |+|++++
T Consensus        84 ~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-g~p~~~~  134 (139)
T 2hhg_A           84 QEDKKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDA-GGPIEAW  134 (139)
T ss_dssp             GSSSEEEEECSSSHHHHHHHHHHHHHTCCSEEEETTHHHHHHHT-TCCCC--
T ss_pred             CCCCeEEEECCCChHHHHHHHHHHHcCCCCeEEecCCHHHHHHC-CCCeecC
Confidence            78999999999999999999999999999999999999999999 9999875

>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A

Probab=99.87  E-value=5.1e-22  Score=189.75  Aligned_cols=121  Identities=17%  Similarity=0.306  Sum_probs=107.9

Q ss_pred             cCCccccCHHHHHHHhhCCCcEEEEecCCCc-cCCCCCCCCCCCCcccCCCCcccCcccccc-c-CCCCCCHHHHHHHHH
Q 017338          240 FQPHLIWTLEQVKRNIEEGTYQLVDARSKAR-FDGDAPEPRKGIRSGHVPGSKCIPFPQMLD-A-SQTLLPADELKKRFE  316 (373)
Q Consensus       240 ~~~~~~is~~el~~~~~~~~~~iIDvR~~~e-~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~-~-~~~~~~~~~l~~~~~  316 (373)
                      .++..+|+++|+.+++++++++|||+|++.| |           ..||||||+|+|+..... . .+.+++.++|++.+.
T Consensus        36 ~~~~~~is~~~l~~~l~~~~~~iiDvR~~~e~y-----------~~gHIpGAi~ip~~~~~~~~~~~~~~~~~~~~~~l~  104 (318)
T 3hzu_A           36 AHPERLVTADWLSAHMGAPGLAIVESDEDVLLY-----------DVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMD  104 (318)
T ss_dssp             SSGGGEECHHHHHHHTTCTTEEEEECCSSTTSG-----------GGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHH
T ss_pred             CCCCceecHHHHHHhccCCCEEEEECCCChhHH-----------hcCcCCCCeEeCchhhhccCcccCCCCHHHHHHHHH
Confidence            3456789999999999888899999999876 9           899999999999864332 2 356788999999999


Q ss_pred             HcCCCCCCcEEEEcCCch-HHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          317 QEGISLEKPVVTACGTGV-TACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       317 ~~gi~~~~~IvvyC~~G~-ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      ++|++++++||+||.+|. +|..+++.|+.+||++|++|+||+.+|.++ |+|++++
T Consensus       105 ~lgi~~~~~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~-g~p~~~~  160 (318)
T 3hzu_A          105 RKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAE-RRETTLD  160 (318)
T ss_dssp             HTTCCTTCEEEEECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHT-TCCCBCC
T ss_pred             HcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhc-CCCcccC
Confidence            999999999999999887 999999999999999999999999999999 9999875

>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2

Probab=99.86  E-value=3.3e-22  Score=187.50  Aligned_cols=117  Identities=18%  Similarity=0.325  Sum_probs=105.8

Q ss_pred             cccCHHHHHHHhhCCCcEEEEec----------CCCccCCCCCCCCCCCCcccCCCCcccCcccccccC----CCCCCHH
Q 017338          244 LIWTLEQVKRNIEEGTYQLVDAR----------SKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLPAD  309 (373)
Q Consensus       244 ~~is~~el~~~~~~~~~~iIDvR----------~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~----~~~~~~~  309 (373)
                      .+|+++++.+++++++++|||+|          ++.||           ..||||||+|+|+.++.+..    +.+++.+
T Consensus         4 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~-----------~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~   72 (280)
T 1urh_A            4 WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEY-----------LNGHIPGAVFFDIEALSDHTSPLPHMLPRPE   72 (280)
T ss_dssp             CEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHH-----------HHSBCTTCEECCGGGGSCSSSSSSSCCCCHH
T ss_pred             ceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhh-----------hhCcCCCCEECCHHHhcCCCCCCCCCCCCHH
Confidence            46899999999987789999999          56677           78999999999999876543    4677899


Q ss_pred             HHHHHHHHcCCCCCCcEEEEcCCchH-HHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          310 ELKKRFEQEGISLEKPVVTACGTGVT-ACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       310 ~l~~~~~~~gi~~~~~IvvyC~~G~r-a~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +|++.+.++|++++++|||||.+|.+ |..+++.|+.+||++|++|+|||.+|..+ |+|++++
T Consensus        73 ~~~~~~~~~gi~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~-g~p~~~~  135 (280)
T 1urh_A           73 TFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRD-DLLLEEG  135 (280)
T ss_dssp             HHHHHHHHTTCCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHT-TCCCBBS
T ss_pred             HHHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHC-CCcccCC
Confidence            99999999999999999999999998 89999999999999999999999999998 9999875

>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A

Probab=99.86  E-value=4e-23  Score=165.75  Aligned_cols=97  Identities=19%  Similarity=0.372  Sum_probs=78.2

Q ss_pred             HHHHHhh--CCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCcEE
Q 017338          250 QVKRNIE--EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVV  327 (373)
Q Consensus       250 el~~~~~--~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~Iv  327 (373)
                      ||++++.  +++++|||+|++.||           ..||||||+|||+.++.+.            ...  .++++++||
T Consensus         2 el~~~l~~~~~~~~liDvR~~~e~-----------~~ghIpgAi~ip~~~l~~~------------~~~--~l~~~~~iv   56 (106)
T 3hix_A            2 VLKSRLEWGEPAFTILDVRDRSTY-----------NDGHIMGAMAMPIEDLVDR------------ASS--SLEKSRDIY   56 (106)
T ss_dssp             -----------CCEEEECSCHHHH-----------HTCEETTCEECCGGGHHHH------------HHH--HSCTTSCEE
T ss_pred             hHHHHHHcCCCCeEEEECCCHHHH-----------hcCcCCCCEeCCHHHHHHH------------HHh--cCCCCCeEE
Confidence            4555555  346999999999999           8999999999999776421            112  378899999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          328 TACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       328 vyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +||.+|.||..+++.|+.+||+||++|+|||.+|.++ |+|+++.
T Consensus        57 vyc~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-g~~~~~~  100 (106)
T 3hix_A           57 VYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAI-GGPTELE  100 (106)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCSCEEECTTHHHHHHHT-TCCEEEC
T ss_pred             EEECCCChHHHHHHHHHHcCCcCEEEecCCHHHHHHC-CCCCCCC
Confidence            9999999999999999999999999999999999999 9998864

>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A

Probab=99.86  E-value=2.9e-22  Score=169.73  Aligned_cols=102  Identities=23%  Similarity=0.332  Sum_probs=90.1

Q ss_pred             cccCHHHHHHHhhCC--CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCC
Q 017338          244 LIWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  321 (373)
Q Consensus       244 ~~is~~el~~~~~~~--~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~  321 (373)
                      ..|+++|+.+.+.++  +++|||||++.||           ..||||||+|||+.++.....              .+++
T Consensus        16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey-----------~~ghIpgAinip~~~l~~~~~--------------~~l~   70 (144)
T 3nhv_A           16 YETDIADLSIDIKKGYEGIIVVDVRDAEAY-----------KECHIPTAISIPGNKINEDTT--------------KRLS   70 (144)
T ss_dssp             TEEEHHHHHHHHHTTCCSEEEEECSCHHHH-----------HHCBCTTCEECCGGGCSTTTT--------------TTCC
T ss_pred             cccCHHHHHHHHHcCCCCEEEEECcCHHHH-----------hcCCCCCCEECCHHHHhHHHH--------------hhCC
Confidence            357999999998765  7999999999999           899999999999998764211              1578


Q ss_pred             CCCcEEEEcCCc--hHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          322 LEKPVVTACGTG--VTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       322 ~~~~IvvyC~~G--~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      ++++||+||.+|  .+|..+++.|+.+|| +|++|+|||.+|.+. |+|++++
T Consensus        71 ~~~~ivvyC~~g~~~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~-g~pv~~~  121 (144)
T 3nhv_A           71 KEKVIITYCWGPACNGATKAAAKFAQLGF-RVKELIGGIEYWRKE-NGEVEGT  121 (144)
T ss_dssp             TTSEEEEECSCTTCCHHHHHHHHHHHTTC-EEEEEESHHHHHHHT-TCCCBSS
T ss_pred             CCCeEEEEECCCCccHHHHHHHHHHHCCC-eEEEeCCcHHHHHHC-CCCccCC
Confidence            999999999999  799999999999999 699999999999998 9999875

>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A

Probab=99.86  E-value=7.7e-22  Score=158.68  Aligned_cols=102  Identities=21%  Similarity=0.285  Sum_probs=88.6

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 017338           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi  154 (373)
                      .+.|+++++.+++++++++|||||         +..+|..||||||+|+|+..+                 .+.+..  +
T Consensus         4 ~~~i~~~~l~~~~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~l-----------------~~~~~~--l   55 (108)
T 1gmx_A            4 FECINVADAHQKLQEKEAVLVDIR---------DPQSFAMGHAVQAFHLTNDTL-----------------GAFMRD--N   55 (108)
T ss_dssp             CEEECHHHHHHHHHTTCCEEEECS---------CHHHHHHCEETTCEECCHHHH-----------------HHHHHH--S
T ss_pred             ccccCHHHHHHHHhCCCCEEEEcC---------CHHHHHhCCCccCEeCCHHHH-----------------HHHHHh--c
Confidence            356999999999987789999996         458999999999999998654                 345555  4


Q ss_pred             CCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccC
Q 017338          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESS  206 (373)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~  206 (373)
                      +++++||+||..|. ++.++++.|+.+||++|++|+||+.+|.++ +|+++.
T Consensus        56 ~~~~~ivvyc~~g~-rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~~~  105 (108)
T 1gmx_A           56 DFDTPVMVMCYHGN-SSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEVA  105 (108)
T ss_dssp             CTTSCEEEECSSSS-HHHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGEE
T ss_pred             CCCCCEEEEcCCCc-hHHHHHHHHHHcCCceEEEecCCHHHHHHh-CCcccc
Confidence            68899999999876 499999999999999999999999999998 998764

>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}

Probab=99.85  E-value=1.1e-21  Score=157.88  Aligned_cols=101  Identities=19%  Similarity=0.257  Sum_probs=86.4

Q ss_pred             CcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 017338           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (373)
Q Consensus        76 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~  155 (373)
                      +.|++++|.+++++  ++|||||         +..||..||||||+|+|+..+.                 +.+..  ++
T Consensus         4 ~~is~~el~~~l~~--~~iiDvR---------~~~e~~~ghIpgA~~ip~~~l~-----------------~~~~~--l~   53 (108)
T 3gk5_A            4 RSINAADLYENIKA--YTVLDVR---------EPFELIFGSIANSINIPISELR-----------------EKWKI--LE   53 (108)
T ss_dssp             CEECHHHHHHTTTT--CEEEECS---------CHHHHTTCBCTTCEECCHHHHH-----------------HHGGG--SC
T ss_pred             cEeCHHHHHHHHcC--CEEEECC---------CHHHHhcCcCCCCEEcCHHHHH-----------------HHHHh--CC
Confidence            46999999999886  9999996         4589999999999999997643                 34443  36


Q ss_pred             CCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCC
Q 017338          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (373)
Q Consensus       156 ~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~  208 (373)
                      ++++||+||..|.+ |.++++.|+.+|| +|++|+||+.+|.++|+|+++..+
T Consensus        54 ~~~~ivvyC~~G~r-s~~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~~~~  104 (108)
T 3gk5_A           54 RDKKYAVICAHGNR-SAAAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVLEHH  104 (108)
T ss_dssp             TTSCEEEECSSSHH-HHHHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBCC--
T ss_pred             CCCeEEEEcCCCcH-HHHHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCCCCC
Confidence            88999999987765 8999999999999 999999999999999999998754

>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3

Probab=99.85  E-value=8.6e-22  Score=163.61  Aligned_cols=113  Identities=19%  Similarity=0.185  Sum_probs=92.2

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      ....|+++++.++++ ++++|||||         +..+|..||||||+|+|+..+..     ..++++.+.+.+.+.  .
T Consensus        16 ~~~~is~~e~~~~l~-~~~~lIDvR---------~~~e~~~ghIpgAinip~~~~~~-----~~~~~~~~~~~~~~~--~   78 (129)
T 1tq1_A           16 VPSSVSVTVAHDLLL-AGHRYLDVR---------TPEEFSQGHACGAINVPYMNRGA-----SGMSKNTDFLEQVSS--H   78 (129)
T ss_dssp             CCEEEEHHHHHHHHH-HTCCEEEES---------CHHHHHHCCBTTBEECCSCCCST-----TTCCCTTTHHHHHTT--T
T ss_pred             CCcccCHHHHHHHhc-CCCEEEECC---------CHHHHhcCCCCCcEECcHhhccc-----ccccCCHHHHHHHHh--h
Confidence            456799999999887 478999996         45899999999999999976532     233444444454443  3


Q ss_pred             CCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcc
Q 017338          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE  204 (373)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~  204 (373)
                      ++++++||+||..|.+ |.++++.|+.+||++|++|+||+.+|.++|+|++
T Consensus        79 l~~~~~ivvyC~~G~r-s~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~  128 (129)
T 1tq1_A           79 FGQSDNIIVGCQSGGR-SIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTK  128 (129)
T ss_dssp             CCTTSSEEEEESSCSH-HHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC
T ss_pred             CCCCCeEEEECCCCcH-HHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCC
Confidence            5788999999998764 9999999999999999999999999999999986

>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}

Probab=99.85  E-value=1.1e-22  Score=164.38  Aligned_cols=98  Identities=18%  Similarity=0.225  Sum_probs=83.7

Q ss_pred             ccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCC
Q 017338          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (373)
Q Consensus       245 ~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~  324 (373)
                      .|+++|+    ..++++|||||++.||           ..||||||+|+|+.++..             .+.+.++++++
T Consensus         6 ~is~~el----~~~~~~liDvR~~~e~-----------~~ghIpgAi~ip~~~l~~-------------~~~~~~~~~~~   57 (110)
T 2k0z_A            6 AISLEEV----NFNDFIVVDVRELDEY-----------EELHLPNATLISVNDQEK-------------LADFLSQHKDK   57 (110)
T ss_dssp             EEETTTC----CGGGSEEEEEECHHHH-----------HHSBCTTEEEEETTCHHH-------------HHHHHHSCSSS
T ss_pred             eeCHHHh----ccCCeEEEECCCHHHH-----------hcCcCCCCEEcCHHHHHH-------------HHHhcccCCCC
Confidence            3455554    2347899999999999           899999999999977542             23333588999


Q ss_pred             cEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          325 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       325 ~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +||+||.+|.||..+++.|+.+||++ ++|+|||.+|.++ |+|++++
T Consensus        58 ~ivvyC~~G~rs~~aa~~L~~~G~~~-~~l~GG~~~W~~~-g~p~~~~  103 (110)
T 2k0z_A           58 KVLLHCRAGRRALDAAKSMHELGYTP-YYLEGNVYDFEKY-GFRMVYD  103 (110)
T ss_dssp             CEEEECSSSHHHHHHHHHHHHTTCCC-EEEESCGGGTTTT-TCCCBCC
T ss_pred             EEEEEeCCCchHHHHHHHHHHCCCCE-EEecCCHHHHHHC-CCcEecC
Confidence            99999999999999999999999999 9999999999998 9999876

>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}

Probab=99.85  E-value=2.6e-22  Score=170.73  Aligned_cols=115  Identities=21%  Similarity=0.201  Sum_probs=89.4

Q ss_pred             ccCHHHHHHHhhC-CCcEEEEecCCCccCCCCCCCCCCCCc-ccC------CCCcccCcccccccCCCCCCHHHHHHHHH
Q 017338          245 IWTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRS-GHV------PGSKCIPFPQMLDASQTLLPADELKKRFE  316 (373)
Q Consensus       245 ~is~~el~~~~~~-~~~~iIDvR~~~e~~G~~~~~~~~~~~-GhI------pGA~~ip~~~l~~~~~~~~~~~~l~~~~~  316 (373)
                      .|+++++.+++++ ++++|||||++.||           .. |||      |||+|+|+.+ .+....-...+++++.+.
T Consensus         6 ~is~~el~~~l~~~~~~~liDVR~~~e~-----------~~~ghi~~~g~~pgAv~ip~~~-~~~~~~~~~~~~l~~~l~   73 (148)
T 2fsx_A            6 DITPLQAWEMLSDNPRAVLVDVRCEAEW-----------RFVGVPDLSSLGREVVYVEWAT-SDGTHNDNFLAELRDRIP   73 (148)
T ss_dssp             EECHHHHHHHHHHCTTCEEEECSCHHHH-----------HHTCEECCGGGTCCCEECCSBC-TTSCBCTTHHHHHHHHCC
T ss_pred             cCCHHHHHHHHhcCCCeEEEECCCHHHH-----------HhcCCCccccCCCCcEEeeeec-cccccCHHHHHHHHHHHh
Confidence            4789999998874 68999999999999           65 999      9999999987 321100011356666666


Q ss_pred             HcCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccH------------HHHhcCCCCCCcCC
Q 017338          317 QEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSW------------TEWGAQPDTPVETS  372 (373)
Q Consensus       317 ~~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~------------~~W~~~~g~Pv~~~  372 (373)
                      +.+++++++|||||.+|.||..+++.|+.+||++|++|+|||            .+|.++ |+|++++
T Consensus        74 ~~~~~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~-glp~~~~  140 (148)
T 2fsx_A           74 ADADQHERPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAV-GLPWRQG  140 (148)
T ss_dssp             -------CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTT-TCSEECC
T ss_pred             hccCCCCCEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHc-CCCCCcc
Confidence            667899999999999999999999999999999999999999            688888 9999864

>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3

Probab=99.85  E-value=2.3e-21  Score=162.78  Aligned_cols=106  Identities=17%  Similarity=0.281  Sum_probs=90.8

Q ss_pred             CCcccHHHHHHhcC-CCCeEEEEeecCCCCCCCCChhhhhh-CC--CcCceecCcccccccCCCCCCCCCCHHHHHHHHH
Q 017338           75 EPVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQV-AH--IPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS  150 (373)
Q Consensus        75 ~~~is~~~l~~~l~-~~~~~iiDvR~~~~~~~r~~~~ey~~-gH--IpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~  150 (373)
                      ...|++++|.++++ +++++|||||         +..||.. ||  ||||+|+|+..+..                 ...
T Consensus        22 ~~~is~~el~~~l~~~~~~~liDVR---------~~~E~~~~gh~~IpgAinip~~~l~~-----------------~~~   75 (137)
T 1qxn_A           22 MVMLSPKDAYKLLQENPDITLIDVR---------DPDELKAMGKPDVKNYKHMSRGKLEP-----------------LLA   75 (137)
T ss_dssp             SEEECHHHHHHHHHHCTTSEEEECC---------CHHHHHHTCEECCSSEEECCTTTSHH-----------------HHH
T ss_pred             CcccCHHHHHHHHhcCCCeEEEECC---------CHHHHHhcCCcCCCCCEEcchHHhhh-----------------HHh
Confidence            45699999999997 6679999996         4589999 99  99999999987632                 011


Q ss_pred             HcCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCC
Q 017338          151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (373)
Q Consensus       151 ~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~  207 (373)
                      ..+++++++|||||..|.+ |.++++.|+.+||++|++|+||+.+|.++|+|+++..
T Consensus        76 ~~~l~~~~~ivvyC~~G~r-S~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  131 (137)
T 1qxn_A           76 KSGLDPEKPVVVFCKTAAR-AALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRS  131 (137)
T ss_dssp             HHCCCTTSCEEEECCSSSC-HHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECCC
T ss_pred             hccCCCCCeEEEEcCCCcH-HHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCccccc
Confidence            2356889999999998875 9999999999999999999999999999999998764

>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}

Probab=99.85  E-value=1e-21  Score=164.98  Aligned_cols=112  Identities=18%  Similarity=0.200  Sum_probs=88.1

Q ss_pred             CCcccHHHHHHhcC--CCCeEEEEeecCCCCCCCCChhhhhh-CCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHH
Q 017338           75 EPVVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQV-AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (373)
Q Consensus        75 ~~~is~~~l~~~l~--~~~~~iiDvR~~~~~~~r~~~~ey~~-gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~  151 (373)
                      ...|++++|.++++  +++++|||||         +..+|.. ||||||+|+|+..+........ ..          ..
T Consensus        21 ~~~is~~~l~~~l~~~~~~~~liDvR---------~~~e~~~~ghIpgA~~ip~~~l~~~~~~~~-~~----------~~   80 (139)
T 2hhg_A           21 IETLTTADAIALHKSGASDVVIVDIR---------DPREIERDGKIPGSFSCTRGMLEFWIDPQS-PY----------AK   80 (139)
T ss_dssp             SEEECHHHHHHHHHTTCTTEEEEECS---------CHHHHHHHCCCTTCEECCGGGHHHHHCTTS-TT----------CC
T ss_pred             cCccCHHHHHHHHhccCCCeEEEECC---------CHHHHHhCCCCCCeEECChHHHHHhcCccc-hh----------hh
Confidence            35699999999998  5689999996         4589998 9999999999987632100000 00          01


Q ss_pred             cCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCC
Q 017338          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (373)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~  207 (373)
                      .+++++++||+||..|. +|.++++.|+.+||++|++|+||+.+|.++|+|+++..
T Consensus        81 ~~~~~~~~ivvyC~~G~-rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  135 (139)
T 2hhg_A           81 PIFQEDKKFVFYCAGGL-RSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEAWA  135 (139)
T ss_dssp             GGGGSSSEEEEECSSSH-HHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC---
T ss_pred             ccCCCCCeEEEECCCCh-HHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeecCC
Confidence            13568899999999876 48999999999999999999999999999999998764

>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X

Probab=99.85  E-value=2.1e-21  Score=181.08  Aligned_cols=117  Identities=23%  Similarity=0.334  Sum_probs=106.6

Q ss_pred             cccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccC----CCCCCHHHHHHHHHHcC
Q 017338          244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLPADELKKRFEQEG  319 (373)
Q Consensus       244 ~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~----~~~~~~~~l~~~~~~~g  319 (373)
                      ..|+++++.+++++++++|||+|++.||           ..||||||+|+|+..+.+..    +.+++.+.|.+.+.++|
T Consensus         9 ~~is~~~l~~~l~~~~~~iiDvR~~~ey-----------~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~g   77 (271)
T 1e0c_A            9 LVIEPADLQARLSAPELILVDLTSAARY-----------AEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELG   77 (271)
T ss_dssp             SEECHHHHHTTTTCTTEEEEECSCHHHH-----------HHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHT
T ss_pred             ceeeHHHHHHhccCCCeEEEEcCCcchh-----------hhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcC
Confidence            3689999999987778999999999999           89999999999999876542    46778999999999999


Q ss_pred             CCCCCcEEEEcCCch-HHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          320 ISLEKPVVTACGTGV-TACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       320 i~~~~~IvvyC~~G~-ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      ++++++||+||.+|. +|..+++.|+.+||++|++|+||+.+|..+ |+|++++
T Consensus        78 i~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~-g~p~~~~  130 (271)
T 1e0c_A           78 HRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAE-DRPLSRE  130 (271)
T ss_dssp             CCTTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHT-TCCCBCC
T ss_pred             CCCCCeEEEEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHc-CCCccCC
Confidence            999999999999988 999999999999999999999999999999 9999875

>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A

Probab=99.84  E-value=1.5e-21  Score=164.68  Aligned_cols=104  Identities=25%  Similarity=0.418  Sum_probs=88.3

Q ss_pred             cccHHHHHHhcCC--CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 017338           77 VVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (373)
Q Consensus        77 ~is~~~l~~~l~~--~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi  154 (373)
                      .||+++|.+++++  ++++|||||         +..+|..||||||+|+|+..+.+                 .+ ..++
T Consensus         1 mIs~~el~~~l~~~~~~~~liDvR---------~~~e~~~ghIpgAi~ip~~~l~~-----------------~~-~~~l   53 (141)
T 3ilm_A            1 MSDAHVLKSRLEWGEPAFTILDVR---------DRSTYNDGHIMGAMAMPIEDLVD-----------------RA-SSSL   53 (141)
T ss_dssp             -CCHHHHHHHHHHSCSCEEEEECS---------CHHHHHHCEETTCEECCGGGHHH-----------------HH-HTTS
T ss_pred             CCCHHHHHHHHhcCCCCEEEEECC---------CHHHHhCCCCCCCEEcCHHHHHH-----------------HH-HhcC
Confidence            3899999999874  469999996         55899999999999999987532                 22 1357


Q ss_pred             CCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCC
Q 017338          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (373)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~  208 (373)
                      +++++|||||..|. +|.++++.|+.+||++|++|+||+.+|.++|+|+++..+
T Consensus        54 ~~~~~ivvyC~~g~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~  106 (141)
T 3ilm_A           54 EKSRDIYVYGAGDE-QTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEGIIE  106 (141)
T ss_dssp             CTTSEEEEECSSHH-HHHHHHHHHHHTTCCSEEECTTHHHHHHHTTCCEEEEC-
T ss_pred             CCCCeEEEEECCCh-HHHHHHHHHHHcCCCCEEEecCHHHHHHHCCCCcccCCC
Confidence            78999999999765 599999999999999999999999999999999998763

>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A

Probab=99.84  E-value=3.8e-21  Score=162.77  Aligned_cols=105  Identities=21%  Similarity=0.315  Sum_probs=90.0

Q ss_pred             CcccHHHHHHhcCCC--CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           76 PVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        76 ~~is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      ..||+++|.+++.++  +++|||||         +..+|..||||||+|+|+..+...                  ...+
T Consensus        16 ~~is~~el~~~l~~~~~~~~liDvR---------~~~ey~~ghIpgAinip~~~l~~~------------------~~~~   68 (144)
T 3nhv_A           16 YETDIADLSIDIKKGYEGIIVVDVR---------DAEAYKECHIPTAISIPGNKINED------------------TTKR   68 (144)
T ss_dssp             TEEEHHHHHHHHHTTCCSEEEEECS---------CHHHHHHCBCTTCEECCGGGCSTT------------------TTTT
T ss_pred             cccCHHHHHHHHHcCCCCEEEEECc---------CHHHHhcCCCCCCEECCHHHHhHH------------------HHhh
Confidence            458999999999765  79999996         458999999999999999987531                  1125


Q ss_pred             CCCCCeEEEEcCCCC-chHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCC
Q 017338          154 LENKDGLVVYDGKGI-FSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (373)
Q Consensus       154 i~~~~~VVvy~~~g~-~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~  208 (373)
                      ++++++||+||..|. .+|.++++.|+.+|| +|++|+||+.+|+++|+|+++..+
T Consensus        69 l~~~~~ivvyC~~g~~~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv~~~~~  123 (144)
T 3nhv_A           69 LSKEKVIITYCWGPACNGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEGTLG  123 (144)
T ss_dssp             CCTTSEEEEECSCTTCCHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCCBSSSG
T ss_pred             CCCCCeEEEEECCCCccHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCccCCCC
Confidence            678899999999874 569999999999999 699999999999999999998753

>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A

Probab=99.84  E-value=8.7e-22  Score=157.92  Aligned_cols=100  Identities=29%  Similarity=0.450  Sum_probs=76.9

Q ss_pred             HHHHHhcC--CCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 017338           81 DWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKD  158 (373)
Q Consensus        81 ~~l~~~l~--~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~~~  158 (373)
                      ++|++++.  +++++|||||         +..+|..||||||+|+|+..+.+                ..+..  +++++
T Consensus         1 eel~~~l~~~~~~~~liDvR---------~~~e~~~ghIpgAi~ip~~~l~~----------------~~~~~--l~~~~   53 (106)
T 3hix_A            1 MVLKSRLEWGEPAFTILDVR---------DRSTYNDGHIMGAMAMPIEDLVD----------------RASSS--LEKSR   53 (106)
T ss_dssp             ------------CCEEEECS---------CHHHHHTCEETTCEECCGGGHHH----------------HHHHH--SCTTS
T ss_pred             ChHHHHHHcCCCCeEEEECC---------CHHHHhcCcCCCCEeCCHHHHHH----------------HHHhc--CCCCC
Confidence            35777776  3469999996         45899999999999999987532                11122  46788


Q ss_pred             eEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCC
Q 017338          159 GLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (373)
Q Consensus       159 ~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~  208 (373)
                      +||+||..|.+ +.+++++|+.+||++|++|+||+.+|+++|+|+++..+
T Consensus        54 ~ivvyc~~g~r-s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~~~~~~~~  102 (106)
T 3hix_A           54 DIYVYGAGDEQ-TSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTELEHH  102 (106)
T ss_dssp             CEEEECSSHHH-HHHHHHHHHHTTCSCEEECTTHHHHHHHTTCCEEECCE
T ss_pred             eEEEEECCCCh-HHHHHHHHHHcCCcCEEEecCCHHHHHHCCCCCCCCCC
Confidence            99999997765 99999999999999999999999999999999998753

>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}

Probab=99.84  E-value=1.7e-21  Score=152.68  Aligned_cols=90  Identities=19%  Similarity=0.309  Sum_probs=75.3

Q ss_pred             cCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCc
Q 017338          246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKP  325 (373)
Q Consensus       246 is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~  325 (373)
                      |+++++.+++++ +++|||+|++.||           ..||||||+|+|+.++.+...               .+++ ++
T Consensus         4 is~~~l~~~~~~-~~~liDvR~~~e~-----------~~ghi~gAi~ip~~~l~~~~~---------------~l~~-~~   55 (94)
T 1wv9_A            4 VRPEELPALLEE-GVLVVDVRPADRR-----------STPLPFAAEWVPLEKIQKGEH---------------GLPR-RP   55 (94)
T ss_dssp             ECGGGHHHHHHT-TCEEEECCCC--C-----------CSCCSSCCEECCHHHHTTTCC---------------CCCS-SC
T ss_pred             CCHHHHHHHHHC-CCEEEECCCHHHH-----------hcccCCCCEECCHHHHHHHHH---------------hCCC-CC
Confidence            677888888775 7899999999999           789999999999988754322               3677 99


Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcC
Q 017338          326 VVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       326 IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~  364 (373)
                      ||+||.+|.||..+++.|+.+||+ |++|+||+.+|.++
T Consensus        56 ivvyC~~g~rs~~a~~~L~~~G~~-v~~l~GG~~~W~~~   93 (94)
T 1wv9_A           56 LLLVCEKGLLSQVAALYLEAEGYE-AMSLEGGLQALTQG   93 (94)
T ss_dssp             EEEECSSSHHHHHHHHHHHHHTCC-EEEETTGGGCC---
T ss_pred             EEEEcCCCChHHHHHHHHHHcCCc-EEEEcccHHHHHhC
Confidence            999999999999999999999998 99999999999875

>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2

Probab=99.84  E-value=2.1e-21  Score=182.38  Aligned_cols=118  Identities=19%  Similarity=0.353  Sum_probs=104.9

Q ss_pred             ccccCHHHHHHHhhCCCcEEEEec-CCCccCCCCCCCCCCCCcccCCCCcccCccccccc--CCCCCCHHHHHHHHHHcC
Q 017338          243 HLIWTLEQVKRNIEEGTYQLVDAR-SKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA--SQTLLPADELKKRFEQEG  319 (373)
Q Consensus       243 ~~~is~~el~~~~~~~~~~iIDvR-~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~--~~~~~~~~~l~~~~~~~g  319 (373)
                      ..+|+++++.+++++++++|||+| ++.+|           ..||||||+|+|+......  .+.+++.++|.+.+..+|
T Consensus         7 ~~~is~~~l~~~l~~~~~~liDvR~~~~e~-----------~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~g   75 (285)
T 1uar_A            7 EVLVSTDWVQEHLEDPKVRVLEVDEDILLY-----------DTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLG   75 (285)
T ss_dssp             GGEECHHHHHTTTTCTTEEEEEECSSTTHH-----------HHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHHTT
T ss_pred             CceEcHHHHHHhcCCCCEEEEEcCCCcchh-----------hcCcCCCCEECCchhhccCCcccCCCCHHHHHHHHHHcC
Confidence            457899999999987789999999 68999           8999999999999863322  246778899999999999


Q ss_pred             CCCCCcEEEEcCCch-HHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          320 ISLEKPVVTACGTGV-TACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       320 i~~~~~IvvyC~~G~-ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      ++++++||+||.+|. +|..+++.|+.+||++|++|+||+.+|..+ |+|++++
T Consensus        76 i~~~~~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~-g~p~~~~  128 (285)
T 1uar_A           76 ISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEE-GRPLTTE  128 (285)
T ss_dssp             CCTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHH-TCCCBCC
T ss_pred             CCCCCeEEEECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHC-CCcccCC
Confidence            999999999999998 789999999999999999999999999998 8999864

>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}

Probab=99.83  E-value=1.6e-21  Score=157.42  Aligned_cols=100  Identities=17%  Similarity=0.271  Sum_probs=84.6

Q ss_pred             CcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 017338           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (373)
Q Consensus        76 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~  155 (373)
                      ..||+++|    .+++++|||||         +..+|..||||||+|+|+..+..                 .+..++++
T Consensus         5 ~~is~~el----~~~~~~liDvR---------~~~e~~~ghIpgAi~ip~~~l~~-----------------~~~~~~~~   54 (110)
T 2k0z_A            5 YAISLEEV----NFNDFIVVDVR---------ELDEYEELHLPNATLISVNDQEK-----------------LADFLSQH   54 (110)
T ss_dssp             TEEETTTC----CGGGSEEEEEE---------CHHHHHHSBCTTEEEEETTCHHH-----------------HHHHHHSC
T ss_pred             eeeCHHHh----ccCCeEEEECC---------CHHHHhcCcCCCCEEcCHHHHHH-----------------HHHhcccC
Confidence            35777776    34579999997         55899999999999999987532                 44455678


Q ss_pred             CCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCC
Q 017338          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (373)
Q Consensus       156 ~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~  207 (373)
                      ++++||+||..|. +|.++++.|+.+||++ ++|+||+.+|.++|+|++++.
T Consensus        55 ~~~~ivvyC~~G~-rs~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~p~~~~~  104 (110)
T 2k0z_A           55 KDKKVLLHCRAGR-RALDAAKSMHELGYTP-YYLEGNVYDFEKYGFRMVYDD  104 (110)
T ss_dssp             SSSCEEEECSSSH-HHHHHHHHHHHTTCCC-EEEESCGGGTTTTTCCCBCCC
T ss_pred             CCCEEEEEeCCCc-hHHHHHHHHHHCCCCE-EEecCCHHHHHHCCCcEecCC
Confidence            9999999999775 5999999999999999 999999999999999998765

>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A

Probab=99.83  E-value=6.7e-21  Score=178.25  Aligned_cols=117  Identities=16%  Similarity=0.332  Sum_probs=104.0

Q ss_pred             cccCHHHHHHHhhCCCcEEEEecC-CCccCCCCCCCCCCCCcccCCCCcccCccccccc--CCCCCCHHHHHHHHHHcCC
Q 017338          244 LIWTLEQVKRNIEEGTYQLVDARS-KARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA--SQTLLPADELKKRFEQEGI  320 (373)
Q Consensus       244 ~~is~~el~~~~~~~~~~iIDvR~-~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~--~~~~~~~~~l~~~~~~~gi  320 (373)
                      ..|+++++.+++++++.+|||+|+ +.||           ..||||||+|+|+..+...  .+.+.+.++|++.+.++|+
T Consensus         6 ~~is~~~l~~~l~~~~~~liDvR~~~~ey-----------~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi   74 (277)
T 3aay_A            6 VLVSADWAESNLHAPKVVFVEVDEDTSAY-----------DRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGI   74 (277)
T ss_dssp             HEECHHHHHTTTTCTTEEEEEEESSSHHH-----------HHCBSTTCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHTC
T ss_pred             ceEcHHHHHHHhCCCCEEEEEcCCChhhH-----------hhCCCCCcEEecccccccCCCCCCCCCHHHHHHHHHHcCC
Confidence            368899999998877899999998 8999           8999999999999875432  2457788999999999999


Q ss_pred             CCCCcEEEEcCCch-HHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          321 SLEKPVVTACGTGV-TACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       321 ~~~~~IvvyC~~G~-ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +++++||+||.+|. +|..+++.|+.+||++|++|+||+.+|..+ |+|++++
T Consensus        75 ~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~-g~p~~~~  126 (277)
T 3aay_A           75 ANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELD-GRPLSSD  126 (277)
T ss_dssp             CTTSEEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHT-TCCCBCC
T ss_pred             CCCCeEEEECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHc-CCccccC
Confidence            99999999999875 688999999999999999999999999999 9999875

>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A

Probab=99.83  E-value=1.2e-21  Score=161.69  Aligned_cols=102  Identities=20%  Similarity=0.263  Sum_probs=87.1

Q ss_pred             cccCHHHHHHHhhCC--CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCC
Q 017338          244 LIWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  321 (373)
Q Consensus       244 ~~is~~el~~~~~~~--~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~  321 (373)
                      ..|+++|+.+.+.++  +++|||||++.||.          ..||||||+|||+.++.             +.+.  .++
T Consensus        15 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~----------~~ghIpgA~nip~~~l~-------------~~~~--~l~   69 (124)
T 3flh_A           15 LYIDHHTVLADMQNATGKYVVLDVRNAPAQV----------KKDQIKGAIAMPAKDLA-------------TRIG--ELD   69 (124)
T ss_dssp             TEECHHHHHHHHHHTCCCEEEEECCCSCHHH----------HCCEETTCEECCHHHHH-------------HHGG--GSC
T ss_pred             ceecHHHHHHHHHcCCCCEEEEECCCHHHHH----------hcCcCCCCEECCHHHHH-------------HHHh--cCC
Confidence            358999999988764  48999999999962          58999999999996653             3333  378


Q ss_pred             CCCcEEEEcCCchH--HHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          322 LEKPVVTACGTGVT--ACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       322 ~~~~IvvyC~~G~r--a~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      ++++||+||.+|.+  |..+++.|+.+||+ |++|+|||.+|... ++|+.+.
T Consensus        70 ~~~~ivvyC~~g~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~-~~p~~~~  120 (124)
T 3flh_A           70 PAKTYVVYDWTGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGM-QLPLEHH  120 (124)
T ss_dssp             TTSEEEEECSSSSCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHT-TCCEEC-
T ss_pred             CCCeEEEEeCCCCchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHc-CCCCCcc
Confidence            89999999999999  88999999999996 99999999999999 9998765

>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A

Probab=99.82  E-value=1.5e-20  Score=177.82  Aligned_cols=118  Identities=19%  Similarity=0.321  Sum_probs=104.9

Q ss_pred             ccccCHHHHHHHhhC----CCcEEEEec--------CCCccCCCCCCCCCCCCcccCCCCcccCcccccccC----CCCC
Q 017338          243 HLIWTLEQVKRNIEE----GTYQLVDAR--------SKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLL  306 (373)
Q Consensus       243 ~~~is~~el~~~~~~----~~~~iIDvR--------~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~----~~~~  306 (373)
                      ...|+++++.+++++    ++++|||||        ++.||           ..||||||+|+|+.++.+..    ..++
T Consensus         7 ~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey-----------~~gHIpGAi~ip~~~l~~~~~~~~~~lp   75 (296)
T 1rhs_A            7 RALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEY-----------LERHVPGASFFDIEECRDKASPYEVMLP   75 (296)
T ss_dssp             CSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHH-----------HHSBCTTCEECCTTTSSCTTSSSSSCCC
T ss_pred             CceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhH-----------hhCcCCCCEEeCHHHhcCCCCCCCCCCC
Confidence            347899999999876    578999999        57888           79999999999998776542    4677


Q ss_pred             CHHHHHHHHHHcCCCCCCcEEEEcCC--chH-HHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          307 PADELKKRFEQEGISLEKPVVTACGT--GVT-ACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       307 ~~~~l~~~~~~~gi~~~~~IvvyC~~--G~r-a~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +.++|++.+.++|++++++|||||.+  |.+ |..+++.|+.+||++|++|+||+.+|..+ |+|++++
T Consensus        76 ~~~~~~~~l~~lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~-g~p~~~~  143 (296)
T 1rhs_A           76 SEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKE-GHPVTSE  143 (296)
T ss_dssp             CHHHHHHHHHHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHT-TCCCBCS
T ss_pred             CHHHHHHHHHHcCCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHc-CCccccC
Confidence            88999999999999999999999998  876 77999999999999999999999999999 9999875

>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}

Probab=99.82  E-value=1.3e-21  Score=161.40  Aligned_cols=107  Identities=19%  Similarity=0.225  Sum_probs=83.7

Q ss_pred             ccCHHHHHHHhhCC-CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHH----HcC
Q 017338          245 IWTLEQVKRNIEEG-TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE----QEG  319 (373)
Q Consensus       245 ~is~~el~~~~~~~-~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~----~~g  319 (373)
                      .|+++|+.+++.++ +++|||||++.||           ..||||||+|+|+.++.+....+  ...+.+.+.    +.+
T Consensus         2 ~is~~el~~~l~~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~~~~~~~~~--~~~~~~~l~~~~~~~~   68 (127)
T 3i2v_A            2 RVSVTDYKRLLDSGAFHLLLDVRPQVEV-----------DICRLPHALHIPLKHLERRDAES--LKLLKEAIWEEKQGTQ   68 (127)
T ss_dssp             EECHHHHHHHHHHTCCCEEEECSCHHHH-----------HHCCCTTSEECCHHHHHTTCHHH--HHHHHHHHHHHHTTC-
T ss_pred             CCCHHHHHHHHhCCCCeEEEECCCHHHh-----------hheecCCceeCChHHHhhhhhhh--HHHHHHHHhhhccccc
Confidence            36889999988765 5999999999999           89999999999998876532211  112222222    235


Q ss_pred             CCCCCcEEEEcCCchHHHHHHHHHHHc------CCCCceeecccHHHHhcC
Q 017338          320 ISLEKPVVTACGTGVTACILALGLNRL------GKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       320 i~~~~~IvvyC~~G~ra~~a~~~L~~~------G~~~v~~~~GG~~~W~~~  364 (373)
                      ++++++||+||.+|.||..+++.|+.+      ||.+|++|+|||.+|..+
T Consensus        69 ~~~~~~ivv~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~  119 (127)
T 3i2v_A           69 EGAAVPIYVICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAK  119 (127)
T ss_dssp             --CCEEEEEECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHH
T ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHh
Confidence            677789999999999999999999988      688999999999999976

>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}

Probab=99.82  E-value=2.4e-20  Score=176.89  Aligned_cols=118  Identities=21%  Similarity=0.331  Sum_probs=103.4

Q ss_pred             ccccCHHHHHHHhhCC----CcEEEEec---------CCCccCCCCCCCCCCCCcccCCCCcccCcccccccC----CCC
Q 017338          243 HLIWTLEQVKRNIEEG----TYQLVDAR---------SKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTL  305 (373)
Q Consensus       243 ~~~is~~el~~~~~~~----~~~iIDvR---------~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~----~~~  305 (373)
                      ..+|+++++.+++.++    +.+|||||         ++.||           ..||||||+|+|+..+.+..    +.+
T Consensus        21 ~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey-----------~~gHIpGAi~i~~~~~~~~~~~~~~~l   89 (302)
T 3olh_A           21 QSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREF-----------EERHIPGAAFFDIDQCSDRTSPYDHML   89 (302)
T ss_dssp             CCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHH-----------HHSCCTTCEECCTTTSSCSSCSSSSCC
T ss_pred             CCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHH-----------hhCcCCCCeEeCHHHhcCcCCCCCCCC
Confidence            3578999999999875    89999999         67788           89999999999998876543    456


Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEEcCC---chHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          306 LPADELKKRFEQEGISLEKPVVTACGT---GVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       306 ~~~~~l~~~~~~~gi~~~~~IvvyC~~---G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      ++.++|++.+.++|++++++|||||.+   +.+|..+++.|+.+||++|++|+||+.+|..+ |+|++++
T Consensus        90 p~~~~~~~~~~~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~-g~p~~~~  158 (302)
T 3olh_A           90 PGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQ-NLPLSSG  158 (302)
T ss_dssp             CCHHHHHHHHHHTTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHS-CCC-CCS
T ss_pred             CCHHHHHHHHHHcCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHc-CCCcccC
Confidence            788999999999999999999999963   45799999999999999999999999999999 9999875

>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A

Probab=99.82  E-value=6.8e-21  Score=146.37  Aligned_cols=85  Identities=20%  Similarity=0.310  Sum_probs=73.6

Q ss_pred             CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCcEEEEcCCchHHHH
Q 017338          259 TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACI  338 (373)
Q Consensus       259 ~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~IvvyC~~G~ra~~  338 (373)
                      +.+|||+|++.||           ..||||||+|+|+.++             ++.+.+.+++++++||+||.+|.||..
T Consensus         1 ~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~l-------------~~~~~~l~~~~~~~ivv~C~~g~rs~~   56 (85)
T 2jtq_A            1 AEHWIDVRVPEQY-----------QQEHVQGAINIPLKEV-------------KERIATAVPDKNDTVKVYCNAGRQSGQ   56 (85)
T ss_dssp             CEEEEECSCHHHH-----------TTEEETTCEECCHHHH-------------HHHHHHHCCCTTSEEEEEESSSHHHHH
T ss_pred             CCEEEECCCHHHH-----------HhCCCCCCEEcCHHHH-------------HHHHHHhCCCCCCcEEEEcCCCchHHH
Confidence            3689999999999           7899999999998654             445666678899999999999999999


Q ss_pred             HHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          339 LALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       339 a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +++.|+.+||++|+++ |||.+|.    .|+++|
T Consensus        57 aa~~L~~~G~~~v~~l-GG~~~w~----~~~~~g   85 (85)
T 2jtq_A           57 AKEILSEMGYTHVENA-GGLKDIA----MPKVKG   85 (85)
T ss_dssp             HHHHHHHTTCSSEEEE-EETTTCC----SCEEEC
T ss_pred             HHHHHHHcCCCCEEec-cCHHHHh----cccccC
Confidence            9999999999999999 9999994    455543

>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A

Probab=99.82  E-value=1e-20  Score=156.02  Aligned_cols=103  Identities=20%  Similarity=0.333  Sum_probs=85.9

Q ss_pred             CcccHHHHHHhcCCC--CeEEEEeecCCCCCCCCChhhh-hhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHc
Q 017338           76 PVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEY-QVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (373)
Q Consensus        76 ~~is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~ey-~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~  152 (373)
                      ..|++++|.++++++  +++|||||        ++ .+| ..||||||+|+|+..+.                 +.+.. 
T Consensus        15 ~~is~~el~~~l~~~~~~~~liDvR--------~~-~e~~~~ghIpgA~nip~~~l~-----------------~~~~~-   67 (124)
T 3flh_A           15 LYIDHHTVLADMQNATGKYVVLDVR--------NA-PAQVKKDQIKGAIAMPAKDLA-----------------TRIGE-   67 (124)
T ss_dssp             TEECHHHHHHHHHHTCCCEEEEECC--------CS-CHHHHCCEETTCEECCHHHHH-----------------HHGGG-
T ss_pred             ceecHHHHHHHHHcCCCCEEEEECC--------CH-HHHHhcCcCCCCEECCHHHHH-----------------HHHhc-
Confidence            469999999998764  49999996        44 677 99999999999987643                 23333 


Q ss_pred             CCCCCCeEEEEcCCCCch-HHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCC
Q 017338          153 GLENKDGLVVYDGKGIFS-AARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (373)
Q Consensus       153 gi~~~~~VVvy~~~g~~~-a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~  207 (373)
                       ++++++||+||..|.+. |.++++.|+.+||+ |++|+||+.+|+++|+|+.+..
T Consensus        68 -l~~~~~ivvyC~~g~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~~~  121 (124)
T 3flh_A           68 -LDPAKTYVVYDWTGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEHHH  121 (124)
T ss_dssp             -SCTTSEEEEECSSSSCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC--
T ss_pred             -CCCCCeEEEEeCCCCchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCccc
Confidence             56789999999988765 78999999999996 9999999999999999998753

>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1

Probab=99.81  E-value=9.1e-21  Score=161.92  Aligned_cols=106  Identities=18%  Similarity=0.242  Sum_probs=88.9

Q ss_pred             cccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCC
Q 017338          244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (373)
Q Consensus       244 ~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~  323 (373)
                      ..|+++++.+++++++++|||+|++.||           ..||||||+|||+.++.+         .+.+++.  .++++
T Consensus        28 ~~Is~~el~~~l~~~~~~lIDvR~~~ey-----------~~ghIpgAinip~~~l~~---------~~~~l~~--~~~~~   85 (152)
T 1t3k_A           28 SYITSTQLLPLHRRPNIAIIDVRDEERN-----------YDGHIAGSLHYASGSFDD---------KISHLVQ--NVKDK   85 (152)
T ss_dssp             EEECTTTTTTCCCCTTEEEEEESCSHHH-----------HSSCCCSSEEECCSSSST---------THHHHHH--TCCSC
T ss_pred             ceECHHHHHHHhcCCCEEEEECCChhhc-----------cCccCCCCEECCHHHHHH---------HHHHHHH--hcCCC
Confidence            4578888888887678999999999999           799999999999987643         2444444  35788


Q ss_pred             CcEEEEcC-CchHHHHHHHHHH--------HcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          324 KPVVTACG-TGVTACILALGLN--------RLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       324 ~~IvvyC~-~G~ra~~a~~~L~--------~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      ++||+||. +|.|+..++..|.        .+||++|++|+|||.+|.++ |+|++++
T Consensus        86 ~~iVvyC~~~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~-g~p~~~~  142 (152)
T 1t3k_A           86 DTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEAS-GKPVCRC  142 (152)
T ss_dssp             CEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHH-SCSSCCC
T ss_pred             CEEEEEcCCCCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHc-CCccccC
Confidence            99999999 9999888777664        48999999999999999998 9999875

>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3

Probab=99.80  E-value=4e-20  Score=180.21  Aligned_cols=115  Identities=23%  Similarity=0.312  Sum_probs=102.1

Q ss_pred             ccccCHHHHHHHhhCCCcEEEEecC--------CCccCCCCCCCCCCCCcccCCCCcccCccc-cccc------CCCCCC
Q 017338          243 HLIWTLEQVKRNIEEGTYQLVDARS--------KARFDGDAPEPRKGIRSGHVPGSKCIPFPQ-MLDA------SQTLLP  307 (373)
Q Consensus       243 ~~~is~~el~~~~~~~~~~iIDvR~--------~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~-l~~~------~~~~~~  307 (373)
                      ...|+++++.+++++  .+|||+|+        +.||           ..||||||+|+|+.. +.+.      .+.+++
T Consensus        13 ~~~Is~~el~~~l~~--~~iIDvR~~~~~~~~~~~ey-----------~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~   79 (373)
T 1okg_A           13 KVFLDPSEVADHLAE--YRIVDCRYSLKIKDHGSIQY-----------AKEHVKSAIRADVDTNLSKLVPTSTARHPLPP   79 (373)
T ss_dssp             CCEECHHHHTTCGGG--SEEEECCCCSSSTTTTTTHH-----------HHCEETTCEECCTTTTSCCCCTTCCCSSCCCC
T ss_pred             CcEEcHHHHHHHcCC--cEEEEecCCccccccchhHH-----------hhCcCCCCEEeCchhhhhcccccCCccccCCC
Confidence            357899999988865  89999998        5788           799999999999986 6543      256788


Q ss_pred             HHHHHHHHHHcCCCCCCcEEEEc-CCchHHH-HHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          308 ADELKKRFEQEGISLEKPVVTAC-GTGVTAC-ILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       308 ~~~l~~~~~~~gi~~~~~IvvyC-~~G~ra~-~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      .++|++.+.+.|++++++||+|| .+|.+++ .+++.|+.+|| +|++|+||+.+|.++ |+|++++
T Consensus        80 ~~~f~~~l~~~gi~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~-g~pv~~~  144 (373)
T 1okg_A           80 XAEFIDWCMANGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAA-GLEMESG  144 (373)
T ss_dssp             HHHHHHHHHHTTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTT-TCCEECS
T ss_pred             HHHHHHHHHHcCCCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhh-cCCcccC
Confidence            89999999999999999999999 8888886 99999999999 999999999999999 9999865

>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1

Probab=99.80  E-value=6.4e-20  Score=156.65  Aligned_cols=109  Identities=21%  Similarity=0.333  Sum_probs=87.9

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      ....|++++|.+++++++++|||||        + .++|..||||||+|+|+..+.+             .+.+++..+ 
T Consensus        26 ~~~~Is~~el~~~l~~~~~~lIDvR--------~-~~ey~~ghIpgAinip~~~l~~-------------~~~~l~~~~-   82 (152)
T 1t3k_A           26 SISYITSTQLLPLHRRPNIAIIDVR--------D-EERNYDGHIAGSLHYASGSFDD-------------KISHLVQNV-   82 (152)
T ss_dssp             SSEEECTTTTTTCCCCTTEEEEEES--------C-SHHHHSSCCCSSEEECCSSSST-------------THHHHHHTC-
T ss_pred             CCceECHHHHHHHhcCCCEEEEECC--------C-hhhccCccCCCCEECCHHHHHH-------------HHHHHHHhc-
Confidence            4567999999999887789999996        4 4899999999999999987653             244454443 


Q ss_pred             CCCCCeEEEEcC-CCCchHHHHHHHH--------HHcCCCceEEecCCHHHHHhCCCCcccCC
Q 017338          154 LENKDGLVVYDG-KGIFSAARVWWMF--------RVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (373)
Q Consensus       154 i~~~~~VVvy~~-~g~~~a~ra~~~L--------~~~G~~~v~~L~GG~~~W~~~g~pv~~~~  207 (373)
                       +++++||+||. .|.+ +..++..|        +.+||++|++|+||+.+|.++|+|+++..
T Consensus        83 -~~~~~iVvyC~~~G~r-s~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~  143 (152)
T 1t3k_A           83 -KDKDTLVFHSALSQVR-GPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCA  143 (152)
T ss_dssp             -CSCCEEEESSSCCSSS-HHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCS
T ss_pred             -CCCCEEEEEcCCCCcc-hHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccccCC
Confidence             57889999998 6654 55555544        45899999999999999999999998865

>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}

Probab=99.80  E-value=2.5e-20  Score=158.37  Aligned_cols=116  Identities=11%  Similarity=0.089  Sum_probs=87.7

Q ss_pred             CcccHHHHHHhcCC-CCeEEEEeecCCCCCCCCChhhhhh-CCC------cCceecCcccccccCCCCCCCCCC-HHHHH
Q 017338           76 PVVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQV-AHI------PGALFFDVDGVADRTTNLPHMLPS-EEAFA  146 (373)
Q Consensus        76 ~~is~~~l~~~l~~-~~~~iiDvR~~~~~~~r~~~~ey~~-gHI------pGAi~ip~~~l~~~~~~~~~~l~~-~e~~~  146 (373)
                      ..|++++|.+++++ ++++|||||         +.+||.. |||      |||+|+|+.. .+.     ...+. .+++.
T Consensus         5 ~~is~~el~~~l~~~~~~~liDVR---------~~~e~~~~ghi~~~g~~pgAv~ip~~~-~~~-----~~~~~~~~~l~   69 (148)
T 2fsx_A            5 GDITPLQAWEMLSDNPRAVLVDVR---------CEAEWRFVGVPDLSSLGREVVYVEWAT-SDG-----THNDNFLAELR   69 (148)
T ss_dssp             EEECHHHHHHHHHHCTTCEEEECS---------CHHHHHHTCEECCGGGTCCCEECCSBC-TTS-----CBCTTHHHHHH
T ss_pred             ccCCHHHHHHHHhcCCCeEEEECC---------CHHHHHhcCCCccccCCCCcEEeeeec-ccc-----ccCHHHHHHHH
Confidence            46999999999874 689999996         4589997 999      9999999987 221     01121 24455


Q ss_pred             HHHHHcCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCH------------HHHHhCCCCcccCC
Q 017338          147 AAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGL------------PRWRASGYDVESSA  207 (373)
Q Consensus       147 ~~l~~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~------------~~W~~~g~pv~~~~  207 (373)
                      +.+...+++++++|||||..|.+ |.++++.|+.+||++|++|+||+            .+|+++|+|+++..
T Consensus        70 ~~l~~~~~~~~~~ivvyC~~G~r-S~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~~~  141 (148)
T 2fsx_A           70 DRIPADADQHERPVIFLCRSGNR-SIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQGR  141 (148)
T ss_dssp             HHCC-------CCEEEECSSSST-HHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC-
T ss_pred             HHHhhccCCCCCEEEEEcCCChh-HHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCccc
Confidence            55555678899999999998765 89999999999999999999999            68999999988653

>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}

Probab=99.80  E-value=1.5e-20  Score=147.20  Aligned_cols=92  Identities=21%  Similarity=0.245  Sum_probs=73.3

Q ss_pred             cccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCC
Q 017338           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  156 (373)
Q Consensus        77 ~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~  156 (373)
                      .||++++.+++++ +++|||||         +..+|..||||||+|+|+..+...                 +.  .+++
T Consensus         3 ~is~~~l~~~~~~-~~~liDvR---------~~~e~~~ghi~gAi~ip~~~l~~~-----------------~~--~l~~   53 (94)
T 1wv9_A            3 KVRPEELPALLEE-GVLVVDVR---------PADRRSTPLPFAAEWVPLEKIQKG-----------------EH--GLPR   53 (94)
T ss_dssp             EECGGGHHHHHHT-TCEEEECC---------CC--CCSCCSSCCEECCHHHHTTT-----------------CC--CCCS
T ss_pred             cCCHHHHHHHHHC-CCEEEECC---------CHHHHhcccCCCCEECCHHHHHHH-----------------HH--hCCC
Confidence            5889999998876 78999996         348999999999999999876541                 11  2457


Q ss_pred             CCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCC
Q 017338          157 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  200 (373)
Q Consensus       157 ~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g  200 (373)
                       ++||+||..|.+ |.++++.|+.+||+ |++|+||+.+|.++|
T Consensus        54 -~~ivvyC~~g~r-s~~a~~~L~~~G~~-v~~l~GG~~~W~~~G   94 (94)
T 1wv9_A           54 -RPLLLVCEKGLL-SQVAALYLEAEGYE-AMSLEGGLQALTQGK   94 (94)
T ss_dssp             -SCEEEECSSSHH-HHHHHHHHHHHTCC-EEEETTGGGCC----
T ss_pred             -CCEEEEcCCCCh-HHHHHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence             899999998764 89999999999998 999999999998765

>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A

Probab=99.79  E-value=3.1e-20  Score=155.15  Aligned_cols=115  Identities=11%  Similarity=0.024  Sum_probs=89.4

Q ss_pred             ccCHHHHHHHhh-CCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcC-CCC
Q 017338          245 IWTLEQVKRNIE-EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEG-ISL  322 (373)
Q Consensus       245 ~is~~el~~~~~-~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~g-i~~  322 (373)
                      .|+++++.+++. +++++|||||++.||.... .+   ...||||||+|||+.++.        ..++.+.+.+.. +++
T Consensus         6 ~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~-~~---~~~g~~~ga~~ip~~~~~--------~~~~~~~l~~~~~~~~   73 (134)
T 1vee_A            6 SGSAKNAYTKLGTDDNAQLLDIRATADFRQVG-SP---NIKGLGKKAVSTVYNGED--------KPGFLKKLSLKFKDPE   73 (134)
T ss_dssp             BCCHHHHHHHHHHCTTEEEEECSCHHHHHHTC-EE---CCTTTSCCCEECCCCGGG--------HHHHHHHHHTTCSCGG
T ss_pred             ccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcC-CC---cccccCCceEEeeccccc--------ChhHHHHHHHHhCCCC
Confidence            478899998887 5679999999999994100 00   023566999999987642        123334444322 378


Q ss_pred             CCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccH---HHHhcCCCCCCcCC
Q 017338          323 EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSW---TEWGAQPDTPVETS  372 (373)
Q Consensus       323 ~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~---~~W~~~~g~Pv~~~  372 (373)
                      +++|||||.+|.||..++..|+.+||++|++|.||+   .+|.++ |+|++.+
T Consensus        74 ~~~ivv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~-g~p~~~~  125 (134)
T 1vee_A           74 NTTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNS-SLPWIEP  125 (134)
T ss_dssp             GCEEEEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGG-TCCEECC
T ss_pred             CCEEEEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhc-CCCCCCC
Confidence            999999999999999999999999999999999999   789999 9999864

>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}

Probab=99.78  E-value=7.1e-20  Score=152.20  Aligned_cols=103  Identities=15%  Similarity=0.294  Sum_probs=80.6

Q ss_pred             ccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccC---------CC-----------
Q 017338          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS---------QT-----------  304 (373)
Q Consensus       245 ~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~---------~~-----------  304 (373)
                      .|+++++.+   +++++|||||++.||           ..||||||+|+|+..+....         +.           
T Consensus         6 ~i~~~el~~---~~~~~iiDvR~~~e~-----------~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (134)
T 3g5j_A            6 VIKIEKALK---LDKVIFVDVRTEGEY-----------EEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYV   71 (134)
T ss_dssp             EECHHHHTT---CTTEEEEECSCHHHH-----------HHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             ccCHHHHHh---cCCcEEEEcCCHHHH-----------hcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccc
Confidence            467788765   568999999999999           89999999999997643210         00           


Q ss_pred             CCCHHHHHHHHHHcCCCCC-CcEEEEc-CCchHHHHHHHHHHHcCCCCceeecccHHHHhcC
Q 017338          305 LLPADELKKRFEQEGISLE-KPVVTAC-GTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       305 ~~~~~~l~~~~~~~gi~~~-~~IvvyC-~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~  364 (373)
                      ....+++.+.+.+  ++++ ++||+|| .+|.||..+++.|+.+|| +|++|+|||.+|.+.
T Consensus        72 ~~~~~~~~~~~~~--~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~  130 (134)
T 3g5j_A           72 SYKLKDIYLQAAE--LALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNF  130 (134)
T ss_dssp             GGGHHHHHHHHHH--HHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHH
T ss_pred             cccHHHHHHHHHH--hccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHH
Confidence            0011344445543  5677 9999999 699999999999999999 999999999999864

>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}

Probab=99.77  E-value=2.1e-19  Score=148.05  Aligned_cols=110  Identities=20%  Similarity=0.145  Sum_probs=82.0

Q ss_pred             cccHHHHHHhcCCC-CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHH----HHH
Q 017338           77 VVSVDWLHANLREP-DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA----VSA  151 (373)
Q Consensus        77 ~is~~~l~~~l~~~-~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~----l~~  151 (373)
                      .||+++|.++++++ +++|||||         +..+|..||||||+|+|+..+......      ..+.+.+.    ...
T Consensus         2 ~is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~~~~~~~~------~~~~~~~~l~~~~~~   66 (127)
T 3i2v_A            2 RVSVTDYKRLLDSGAFHLLLDVR---------PQVEVDICRLPHALHIPLKHLERRDAE------SLKLLKEAIWEEKQG   66 (127)
T ss_dssp             EECHHHHHHHHHHTCCCEEEECS---------CHHHHHHCCCTTSEECCHHHHHTTCHH------HHHHHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHhCCCCeEEEECC---------CHHHhhheecCCceeCChHHHhhhhhh------hHHHHHHHHhhhccc
Confidence            48999999998765 59999996         458999999999999999886542100      01112222    223


Q ss_pred             cCCCCCCeEEEEcCCCCchHHHHHHHHHHc------CCCceEEecCCHHHHHhCCCC
Q 017338          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVF------GHDRVWVLDGGLPRWRASGYD  202 (373)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~------G~~~v~~L~GG~~~W~~~g~p  202 (373)
                      .+++++++||+||..|.+ ++++++.|+.+      |+.+|++|+||+.+|.++..|
T Consensus        67 ~~~~~~~~ivv~C~~G~r-s~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~  122 (127)
T 3i2v_A           67 TQEGAAVPIYVICKLGND-SQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDG  122 (127)
T ss_dssp             C---CCEEEEEECSSSSH-HHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCT
T ss_pred             ccCCCCCeEEEEcCCCCc-HHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCC
Confidence            456677799999998765 88889999888      688999999999999986554

>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}

Probab=99.77  E-value=8.1e-19  Score=145.74  Aligned_cols=110  Identities=16%  Similarity=0.247  Sum_probs=79.4

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCC----------------CCCCC
Q 017338           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT----------------NLPHM  138 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~----------------~~~~~  138 (373)
                      ...|++++|.+   +++++|||||         +..+|..||||||+|+|+..+.....                .....
T Consensus         4 ~~~i~~~el~~---~~~~~iiDvR---------~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (134)
T 3g5j_A            4 MSVIKIEKALK---LDKVIFVDVR---------TEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYV   71 (134)
T ss_dssp             -CEECHHHHTT---CTTEEEEECS---------CHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             ccccCHHHHHh---cCCcEEEEcC---------CHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccc
Confidence            34689999876   5589999996         45899999999999999975421000                00000


Q ss_pred             CCCHHHHHHHHHHcCCCCC-CeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhC
Q 017338          139 LPSEEAFAAAVSALGLENK-DGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS  199 (373)
Q Consensus       139 l~~~e~~~~~l~~~gi~~~-~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~  199 (373)
                      .+..++|.+.+..+  +++ ++||+||..++.+|.++++.|+.+|| +|++|+||+.+|++.
T Consensus        72 ~~~~~~~~~~~~~~--~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~  130 (134)
T 3g5j_A           72 SYKLKDIYLQAAEL--ALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNF  130 (134)
T ss_dssp             GGGHHHHHHHHHHH--HTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHH
T ss_pred             cccHHHHHHHHHHh--ccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHH
Confidence            11223455555543  566 89999995344459999999999999 999999999999863

>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}

Probab=99.76  E-value=4.8e-20  Score=154.63  Aligned_cols=111  Identities=13%  Similarity=0.198  Sum_probs=79.4

Q ss_pred             ccCHHHHHH--------HhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCccccccc-C---CCCCCHHHHH
Q 017338          245 IWTLEQVKR--------NIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA-S---QTLLPADELK  312 (373)
Q Consensus       245 ~is~~el~~--------~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~-~---~~~~~~~~l~  312 (373)
                      +|+++|+.+        .+.+++++|||+|++.||           ..||||||+|+|+.++... .   ..+    .+.
T Consensus         2 ~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~-----------~~ghIpgA~~ip~~~~~~~~~~~~~~~----~~~   66 (142)
T 2ouc_A            2 IIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEY-----------NKSHIQGAVHINCADKISRRRLQQGKI----TVL   66 (142)
T ss_dssp             EECHHHHHHHHHC----------CEEEECSCHHHH-----------HHEEETTCEECCCSSHHHHHHHHTTSS----CHH
T ss_pred             ccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHh-----------hhhhccCccccCccHHHHHHHhhcCCc----chh
Confidence            478889988        666668999999999999           8999999999999876431 0   111    122


Q ss_pred             HHHHHcCC-C-----CCCcEEEEcCCchHH---------HHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          313 KRFEQEGI-S-----LEKPVVTACGTGVTA---------CILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       313 ~~~~~~gi-~-----~~~~IvvyC~~G~ra---------~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      ..+...+. .     .+++||+||.+|.++         ..++..|...|| +|++|+|||.+|..+ ++|+.++
T Consensus        67 ~~~~~~~~~~~~~~~~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~-g~~~~~~  139 (142)
T 2ouc_A           67 DLISCREGKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQN-HENLCDN  139 (142)
T ss_dssp             HHHHTTSCTTHHHHHHHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTT-CGGGEEE
T ss_pred             hhCCChhhhHHHhccCCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHH-CHHhhcc
Confidence            22221111 1     368999999999885         346667899999 999999999999998 8888754

>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A

Probab=99.76  E-value=4.9e-20  Score=157.28  Aligned_cols=113  Identities=16%  Similarity=0.202  Sum_probs=84.9

Q ss_pred             ccCHHHHHHHhhC--CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCccccccc---CCCCCCHHHH--HHHHHH
Q 017338          245 IWTLEQVKRNIEE--GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA---SQTLLPADEL--KKRFEQ  317 (373)
Q Consensus       245 ~is~~el~~~~~~--~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~---~~~~~~~~~l--~~~~~~  317 (373)
                      .|+++|+.+++++  ++++|||+|++.||           ..||||||+|||+..+...   .+. .+.+++  .+...+
T Consensus         5 ~Is~~~l~~~l~~~~~~~~iiDvR~~~ey-----------~~gHIpgAinip~~~l~~~~~~~~~-~~~~~ll~~~~~~~   72 (153)
T 2vsw_A            5 QIVTERLVALLESGTEKVLLIDSRPFVEY-----------NTSHILEAININCSKLMKRRLQQDK-VLITELIQHSAKHK   72 (153)
T ss_dssp             EECHHHHHHHHTSTTCCEEEEECSCHHHH-----------HHCEETTCEECCCCHHHHHHHHTTS-SCHHHHHHHSCSSC
T ss_pred             cccHHHHHHHHhcCCCCEEEEECCCHHHh-----------ccCccCCCeeeChHHHHHhhhhcCC-cCHHHhcCchhhhh
Confidence            4788999998873  57899999999999           8999999999999886321   111 122222  111123


Q ss_pred             cCCCCCCcEEEEcCCchHHHHH------HHHHHHc--CCCCceeecccHHHHhcCCCCCCc
Q 017338          318 EGISLEKPVVTACGTGVTACIL------ALGLNRL--GKHDVAVYDGSWTEWGAQPDTPVE  370 (373)
Q Consensus       318 ~gi~~~~~IvvyC~~G~ra~~a------~~~L~~~--G~~~v~~~~GG~~~W~~~~g~Pv~  370 (373)
                      .+++++++|||||.+|.++..+      +++|+.+  ||++|++|+|||.+|... ..++.
T Consensus        73 ~~~~~~~~iVvyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~-~~~~~  132 (153)
T 2vsw_A           73 VDIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRC-FPGLC  132 (153)
T ss_dssp             CCCCTTSEEEEECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHH-CGGGE
T ss_pred             hccCCCCeEEEEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHh-Chhhh
Confidence            4678899999999999887655      5777754  999999999999999876 44443

>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1

Probab=99.76  E-value=6.7e-19  Score=150.20  Aligned_cols=116  Identities=19%  Similarity=0.368  Sum_probs=88.1

Q ss_pred             CCCcccHHHHHHhcCCC--CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCccccc-----ccCCCCCCCCCCHHHHH
Q 017338           74 KEPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVA-----DRTTNLPHMLPSEEAFA  146 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~-----~~~~~~~~~l~~~e~~~  146 (373)
                      ....|++++|.++++++  +++|||||         +..+|..||||||+|+|+..+.     .....+..++|+.+..+
T Consensus        14 ~~~~is~~~l~~~l~~~~~~~~liDvR---------~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~~~   84 (154)
T 1hzm_A           14 MAISKTVAWLNEQLELGNERLLLMDCR---------PQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRD   84 (154)
T ss_dssp             CSSBSCCCCHHHHHHHCSSSCEEECCS---------TTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHH
T ss_pred             cccccCHHHHHHHHhCCCCCEEEEEcC---------CHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHHHH
Confidence            35679999999988765  79999996         4589999999999999998753     11123456777654433


Q ss_pred             HHHHHcCCCCCCeEEEEcCCCCch------HHHHHHHHHHc---CCCceEEecCCHHHHHhCCCCc
Q 017338          147 AAVSALGLENKDGLVVYDGKGIFS------AARVWWMFRVF---GHDRVWVLDGGLPRWRASGYDV  203 (373)
Q Consensus       147 ~~l~~~gi~~~~~VVvy~~~g~~~------a~ra~~~L~~~---G~~~v~~L~GG~~~W~~~g~pv  203 (373)
                      . +.  +++++++||+||..|.+.      +.+++|+|+.+   ||+ |++|+||+.+|.++ +|.
T Consensus        85 ~-~~--~~~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~-~p~  145 (154)
T 1hzm_A           85 R-FT--RRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE-FSL  145 (154)
T ss_dssp             H-HH--HSTTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH-HCS
T ss_pred             H-Hh--ccCCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH-ChH
Confidence            3 22  356788999999987764      36678889877   998 99999999999875 443

>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A

Probab=99.75  E-value=8.7e-19  Score=134.49  Aligned_cols=79  Identities=19%  Similarity=0.255  Sum_probs=69.2

Q ss_pred             CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEEcCCCCch
Q 017338           91 DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFS  170 (373)
Q Consensus        91 ~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~~~~VVvy~~~g~~~  170 (373)
                      +++|||||         +.++|..||||||+|+|+..                 |.+.+..++++++++||+||..|. +
T Consensus         1 ~~~liDvR---------~~~e~~~ghIpgA~~ip~~~-----------------l~~~~~~l~~~~~~~ivv~C~~g~-r   53 (85)
T 2jtq_A            1 AEHWIDVR---------VPEQYQQEHVQGAINIPLKE-----------------VKERIATAVPDKNDTVKVYCNAGR-Q   53 (85)
T ss_dssp             CEEEEECS---------CHHHHTTEEETTCEECCHHH-----------------HHHHHHHHCCCTTSEEEEEESSSH-H
T ss_pred             CCEEEECC---------CHHHHHhCCCCCCEEcCHHH-----------------HHHHHHHhCCCCCCcEEEEcCCCc-h
Confidence            47899996         45899999999999999865                 445677788899999999999765 5


Q ss_pred             HHHHHHHHHHcCCCceEEecCCHHHHH
Q 017338          171 AARVWWMFRVFGHDRVWVLDGGLPRWR  197 (373)
Q Consensus       171 a~ra~~~L~~~G~~~v~~L~GG~~~W~  197 (373)
                      |.++++.|+.+||++|++| ||+.+|.
T Consensus        54 s~~aa~~L~~~G~~~v~~l-GG~~~w~   79 (85)
T 2jtq_A           54 SGQAKEILSEMGYTHVENA-GGLKDIA   79 (85)
T ss_dssp             HHHHHHHHHHTTCSSEEEE-EETTTCC
T ss_pred             HHHHHHHHHHcCCCCEEec-cCHHHHh
Confidence            9999999999999999999 9999994

>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}

Probab=99.74  E-value=1.5e-18  Score=160.54  Aligned_cols=105  Identities=12%  Similarity=0.166  Sum_probs=89.6

Q ss_pred             cCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcC
Q 017338          240 FQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEG  319 (373)
Q Consensus       240 ~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~g  319 (373)
                      ......|+++++.+++++++++|||+|++.||           ..||||||+|+|+..+.+.      .+.+.+.+   .
T Consensus       118 ~~~~~~Is~~el~~ll~~~~~vlIDVR~~~Ey-----------~~GHIpGAiniP~~~~~~~------~~~l~~~l---~  177 (265)
T 4f67_A          118 YNAGTYLSPEEWHQFIQDPNVILLDTRNDYEY-----------ELGTFKNAINPDIENFREF------PDYVQRNL---I  177 (265)
T ss_dssp             TCTTCEECHHHHHHHTTCTTSEEEECSCHHHH-----------HHEEETTCBCCCCSSGGGH------HHHHHHHT---G
T ss_pred             cCCCceECHHHHHHHhcCCCeEEEEeCCchHh-----------hcCcCCCCEeCCHHHHHhh------HHHHHHhh---h
Confidence            34456789999999998889999999999999           8999999999999876531      12233322   3


Q ss_pred             CCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcC
Q 017338          320 ISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       320 i~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~  364 (373)
                      .+++++||+||.+|.||..+++.|+.+||++|++|+||+.+|..+
T Consensus       178 ~~kdk~IVvyC~~G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~  222 (265)
T 4f67_A          178 DKKDKKIAMFCTGGIRCEKTTAYMKELGFEHVYQLHDGILNYLES  222 (265)
T ss_dssp             GGTTSCEEEECSSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHH
T ss_pred             hCCCCeEEEEeCCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHh
Confidence            578999999999999999999999999999999999999999876

>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A

Probab=99.74  E-value=1.8e-18  Score=147.46  Aligned_cols=121  Identities=18%  Similarity=0.278  Sum_probs=85.7

Q ss_pred             CCcccHHHHHHhcCC--CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHH--HHHHH
Q 017338           75 EPVVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAF--AAAVS  150 (373)
Q Consensus        75 ~~~is~~~l~~~l~~--~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~--~~~l~  150 (373)
                      .+.|+++||.+++++  ++++|||||         +..+|..||||||+|||+..+...... ...+ ..+.+  .....
T Consensus         3 ~~~Is~~~l~~~l~~~~~~~~iiDvR---------~~~ey~~gHIpgAinip~~~l~~~~~~-~~~~-~~~~ll~~~~~~   71 (153)
T 2vsw_A            3 GTQIVTERLVALLESGTEKVLLIDSR---------PFVEYNTSHILEAININCSKLMKRRLQ-QDKV-LITELIQHSAKH   71 (153)
T ss_dssp             CEEECHHHHHHHHTSTTCCEEEEECS---------CHHHHHHCEETTCEECCCCHHHHHHHH-TTSS-CHHHHHHHSCSS
T ss_pred             CccccHHHHHHHHhcCCCCEEEEECC---------CHHHhccCccCCCeeeChHHHHHhhhh-cCCc-CHHHhcCchhhh
Confidence            456999999999973  579999996         558999999999999999876221000 0001 11111  11112


Q ss_pred             HcCCCCCCeEEEEcCCCCchHHHH------HHHHHHc--CCCceEEecCCHHHHHhCCCCcccCC
Q 017338          151 ALGLENKDGLVVYDGKGIFSAARV------WWMFRVF--GHDRVWVLDGGLPRWRASGYDVESSA  207 (373)
Q Consensus       151 ~~gi~~~~~VVvy~~~g~~~a~ra------~~~L~~~--G~~~v~~L~GG~~~W~~~g~pv~~~~  207 (373)
                      .++++++++|||||..|.+ +..+      +++|+.+  ||++|++|+||+.+|.+.+.++.+..
T Consensus        72 ~~~~~~~~~iVvyc~~g~~-s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~~~~~~  135 (153)
T 2vsw_A           72 KVDIDCSQKVVVYDQSSQD-VASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGLCEGK  135 (153)
T ss_dssp             CCCCCTTSEEEEECSSCCC-GGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGGGEEC-
T ss_pred             hhccCCCCeEEEEeCCCCc-ccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChhhhcCC
Confidence            3467889999999998766 3333      6778755  99999999999999998877766553

>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A

Probab=99.73  E-value=5.7e-18  Score=141.34  Aligned_cols=110  Identities=14%  Similarity=0.098  Sum_probs=87.8

Q ss_pred             CcccHHHHHHhcC-CCCeEEEEeecCCCCCCCCChhhhhhCCC-------cCceecCcccccccCCCCCCCCCCHHHHHH
Q 017338           76 PVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAHI-------PGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (373)
Q Consensus        76 ~~is~~~l~~~l~-~~~~~iiDvR~~~~~~~r~~~~ey~~gHI-------pGAi~ip~~~l~~~~~~~~~~l~~~e~~~~  147 (373)
                      ..|+++++.+++. +++++|||||         +.+||..+|+       |||+|||+..+.            .+.|..
T Consensus         5 ~~is~~e~~~~l~~~~~~~liDVR---------~~~E~~~~~~~~~~g~~~ga~~ip~~~~~------------~~~~~~   63 (134)
T 1vee_A            5 SSGSAKNAYTKLGTDDNAQLLDIR---------ATADFRQVGSPNIKGLGKKAVSTVYNGED------------KPGFLK   63 (134)
T ss_dssp             CBCCHHHHHHHHHHCTTEEEEECS---------CHHHHHHTCEECCTTTSCCCEECCCCGGG------------HHHHHH
T ss_pred             CccCHHHHHHHHHhCCCeEEEEcC---------CHHHHhhcCCCcccccCCceEEeeccccc------------ChhHHH
Confidence            4599999999887 5689999996         4588986333       699999987642            123444


Q ss_pred             HHHHcC-CCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCH---HHHHhCCCCcccCC
Q 017338          148 AVSALG-LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGL---PRWRASGYDVESSA  207 (373)
Q Consensus       148 ~l~~~g-i~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~---~~W~~~g~pv~~~~  207 (373)
                      .+.... ++++++|||||..|.+ |.+++..|+.+||++|+.|.||+   .+|+++|+|++...
T Consensus        64 ~l~~~~~~~~~~~ivv~C~sG~R-S~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~~~~  126 (134)
T 1vee_A           64 KLSLKFKDPENTTLYILDKFDGN-SELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPK  126 (134)
T ss_dssp             HHHTTCSCGGGCEEEEECSSSTT-HHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEECCC
T ss_pred             HHHHHhCCCCCCEEEEEeCCCCc-HHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCCCCC
Confidence            444333 3788999999998876 89999999999999999999999   78999999998754

>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}

Probab=99.73  E-value=7.8e-18  Score=155.76  Aligned_cols=105  Identities=18%  Similarity=0.286  Sum_probs=88.3

Q ss_pred             CCCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHH-H
Q 017338           72 SPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV-S  150 (373)
Q Consensus        72 ~~~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l-~  150 (373)
                      ....+.|+++++.+++++++++|||||         +..||..||||||+|+|+..+.+              +...+ .
T Consensus       118 ~~~~~~Is~~el~~ll~~~~~vlIDVR---------~~~Ey~~GHIpGAiniP~~~~~~--------------~~~~l~~  174 (265)
T 4f67_A          118 YNAGTYLSPEEWHQFIQDPNVILLDTR---------NDYEYELGTFKNAINPDIENFRE--------------FPDYVQR  174 (265)
T ss_dssp             TCTTCEECHHHHHHHTTCTTSEEEECS---------CHHHHHHEEETTCBCCCCSSGGG--------------HHHHHHH
T ss_pred             cCCCceECHHHHHHHhcCCCeEEEEeC---------CchHhhcCcCCCCEeCCHHHHHh--------------hHHHHHH
Confidence            345678999999999998899999996         45899999999999999988754              22222 3


Q ss_pred             HcCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCC
Q 017338          151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  200 (373)
Q Consensus       151 ~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g  200 (373)
                      .+..+++++||+||..|.+ +.++++.|+..||++|++|+||+.+|.++.
T Consensus       175 ~l~~~kdk~IVvyC~~G~R-S~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~  223 (265)
T 4f67_A          175 NLIDKKDKKIAMFCTGGIR-CEKTTAYMKELGFEHVYQLHDGILNYLESI  223 (265)
T ss_dssp             HTGGGTTSCEEEECSSSHH-HHHHHHHHHHHTCSSEEEETTHHHHHHHHS
T ss_pred             hhhhCCCCeEEEEeCCChH-HHHHHHHHHHcCCCCEEEecCHHHHHHHhc
Confidence            4556789999999997665 889999999999999999999999998753

>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}

Probab=99.72  E-value=7.6e-18  Score=141.15  Aligned_cols=116  Identities=20%  Similarity=0.275  Sum_probs=77.2

Q ss_pred             cccHHHHHH--------hcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHH
Q 017338           77 VVSVDWLHA--------NLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA  148 (373)
Q Consensus        77 ~is~~~l~~--------~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~  148 (373)
                      +|+++||.+        ++.+++++|||||         +..+|..||||||+|+|+..+.....-....++    +...
T Consensus         2 ~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR---------~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~----~~~~   68 (142)
T 2ouc_A            2 IIYPNDLAKKMTKCSKSHLPSQGPVIIDCR---------PFMEYNKSHIQGAVHINCADKISRRRLQQGKIT----VLDL   68 (142)
T ss_dssp             EECHHHHHHHHHC----------CEEEECS---------CHHHHHHEEETTCEECCCSSHHHHHHHHTTSSC----HHHH
T ss_pred             ccCHHHHHHHHHhcccccCCCCCCEEEEeC---------CHHHhhhhhccCccccCccHHHHHHHhhcCCcc----hhhh
Confidence            589999999        6777789999996         558999999999999999875321000000011    1112


Q ss_pred             HHHcCCC------CCCeEEEEcCCCCch--------HHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccC
Q 017338          149 VSALGLE------NKDGLVVYDGKGIFS--------AARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESS  206 (373)
Q Consensus       149 l~~~gi~------~~~~VVvy~~~g~~~--------a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~  206 (373)
                      +...+..      ++++||+||..|.+.        +..++..|...|| +|++|+||+.+|.++|+++.++
T Consensus        69 ~~~~~~~~~~~~~~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~~~  139 (142)
T 2ouc_A           69 ISCREGKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLCDN  139 (142)
T ss_dssp             HHTTSCTTHHHHHHHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGEEE
T ss_pred             CCChhhhHHHhccCCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhhcc
Confidence            2111110      268899999987753        1335556799999 9999999999999999988764

>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}

Probab=99.72  E-value=3.7e-18  Score=145.67  Aligned_cols=105  Identities=20%  Similarity=0.227  Sum_probs=81.1

Q ss_pred             ccCHHHHHHHhhCC----CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCC
Q 017338          245 IWTLEQVKRNIEEG----TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI  320 (373)
Q Consensus       245 ~is~~el~~~~~~~----~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi  320 (373)
                      .|+++++.+++.++    +++|||+|++ ||           ..||||||+|||+..+.+.     ..+++.+.+..   
T Consensus         6 ~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey-----------~~gHIpGAinip~~~l~~~-----~~~~l~~~l~~---   65 (152)
T 2j6p_A            6 YIKPEELVELLDNPDSLVKAAVIDCRDS-DR-----------DCGFIVNSINMPTISCTEE-----MYEKLAKTLFE---   65 (152)
T ss_dssp             EECHHHHHHHHHSHHHHHTEEEEECCST-TG-----------GGCBCTTCEECCTTTCCHH-----HHHHHHHHHHH---
T ss_pred             ccCHHHHHHHHhCCCCCCCEEEEEcCcH-Hh-----------CcCcCCCcEECChhHhhHH-----HHHHHHHHhcc---
Confidence            57899999988763    7899999999 99           8999999999999876431     01344444442   


Q ss_pred             CCCCcEEEEc-CCchHHHHHH----HHHHHcCC--CCceeecccHHHHhcCCCCCCc
Q 017338          321 SLEKPVVTAC-GTGVTACILA----LGLNRLGK--HDVAVYDGSWTEWGAQPDTPVE  370 (373)
Q Consensus       321 ~~~~~IvvyC-~~G~ra~~a~----~~L~~~G~--~~v~~~~GG~~~W~~~~g~Pv~  370 (373)
                      ...+.||+|| .+|.|+..++    ..|+.+||  .+|++|+|||.+|... +.|+.
T Consensus        66 ~~~~~vV~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~-g~~~~  121 (152)
T 2j6p_A           66 EKKELAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHM-YGDVR  121 (152)
T ss_dssp             TTCCEEEEECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHH-HTTTC
T ss_pred             cCCCEEEEEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHH-cCCCC
Confidence            1234577789 7999988777    66788897  5899999999999887 66654

>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1

Probab=99.72  E-value=7.5e-19  Score=149.91  Aligned_cols=107  Identities=21%  Similarity=0.333  Sum_probs=81.9

Q ss_pred             cccCHHHHHHHhhCC--CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccc-----c---CCCCCCHHHHHH
Q 017338          244 LIWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLD-----A---SQTLLPADELKK  313 (373)
Q Consensus       244 ~~is~~el~~~~~~~--~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~-----~---~~~~~~~~~l~~  313 (373)
                      ..|+++++.+.++++  +++|||+|++.||           ..||||||+|+|+..+..     .   ...+.+.++.++
T Consensus        16 ~~is~~~l~~~l~~~~~~~~liDvR~~~ey-----------~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~~~   84 (154)
T 1hzm_A           16 ISKTVAWLNEQLELGNERLLLMDCRPQELY-----------ESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRD   84 (154)
T ss_dssp             SBSCCCCHHHHHHHCSSSCEEECCSTTHHH-----------HHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHH
T ss_pred             cccCHHHHHHHHhCCCCCEEEEEcCCHHHH-----------hhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHHHH
Confidence            357788888888765  7999999999999           899999999999987541     1   112223234445


Q ss_pred             HHHHcCCCCCCcEEEEcCCchHH-------HHHHHHHHHc---CCCCceeecccHHHHhcC
Q 017338          314 RFEQEGISLEKPVVTACGTGVTA-------CILALGLNRL---GKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       314 ~~~~~gi~~~~~IvvyC~~G~ra-------~~a~~~L~~~---G~~~v~~~~GG~~~W~~~  364 (373)
                      .+.  +++++++||+||.+|.++       ..+++.|+.+   ||+ |++|+|||.+|...
T Consensus        85 ~~~--~~~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~  142 (154)
T 1hzm_A           85 RFT--RRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE  142 (154)
T ss_dssp             HHH--HSTTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred             HHh--ccCCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence            554  467889999999998865       4557777765   998 99999999999875

>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}

Probab=99.72  E-value=5.8e-18  Score=161.52  Aligned_cols=116  Identities=15%  Similarity=0.214  Sum_probs=99.0

Q ss_pred             ccCHHHHHHHhhCC---CcEEEEecC---------CCccCCCCCCCCCCCCcccCCCCcccCcccccccC----CCCCCH
Q 017338          245 IWTLEQVKRNIEEG---TYQLVDARS---------KARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLPA  308 (373)
Q Consensus       245 ~is~~el~~~~~~~---~~~iIDvR~---------~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~----~~~~~~  308 (373)
                      +||++++.+++.++   .+++||++-         ..||          +..||||||++++++.+.+..    ++++++
T Consensus        29 LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~----------~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~   98 (327)
T 3utn_X           29 LISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDF----------LTKPRIPNSIFFDIDAISDKKSPYPHMFPTK   98 (327)
T ss_dssp             EECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHH----------HHSCBCTTCEECCTTTSSCTTSSSTTCCCCH
T ss_pred             ccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHH----------HhhCcCCCCeeeChHHhcCCCCCCCCCCcCH
Confidence            79999999998643   478999972         1233          157999999999998876654    468899


Q ss_pred             HHHHHHHHHcCCCCCCcEEEEcCCc-hHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          309 DELKKRFEQEGISLEKPVVTACGTG-VTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       309 ~~l~~~~~~~gi~~~~~IvvyC~~G-~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      ++|++.+.++||+++++||||+..| ..|+++||+|+.+|+++|++|||| .+|.++ |+|++++
T Consensus        99 ~~f~~~l~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~-g~p~~~~  161 (327)
T 3utn_X           99 KVFDDAMSNLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREF-KYPLDSS  161 (327)
T ss_dssp             HHHHHHHHHTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHT-TCCCBCC
T ss_pred             HHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHh-CCCcccC
Confidence            9999999999999999999999765 568899999999999999999987 899999 9999875

>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A

Probab=99.72  E-value=3.6e-18  Score=153.65  Aligned_cols=104  Identities=15%  Similarity=0.213  Sum_probs=85.5

Q ss_pred             ccccCHHHHHHHhhCC------CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHH
Q 017338          243 HLIWTLEQVKRNIEEG------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE  316 (373)
Q Consensus       243 ~~~is~~el~~~~~~~------~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~  316 (373)
                      ...|+++++.++++++      +++|||||++.||           ..||||||+|||+..+...            .+.
T Consensus        43 ~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey-----------~~gHIpGAinip~~~l~~~------------~~~   99 (211)
T 1qb0_A           43 LKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEY-----------EGGHIKTAVNLPLERDAES------------FLL   99 (211)
T ss_dssp             SCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHH-----------HTCEETTCEECCSHHHHHH------------HHH
T ss_pred             CCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHH-----------ccCcCCCCEECCchHHHHH------------hhh
Confidence            3468999999998763      6899999999999           7999999999999775421            111


Q ss_pred             ---HcCCCCCCcE--EEEcC-CchHHHHHHHHHHH----------cCCCCceeecccHHHHhcCCCCCCc
Q 017338          317 ---QEGISLEKPV--VTACG-TGVTACILALGLNR----------LGKHDVAVYDGSWTEWGAQPDTPVE  370 (373)
Q Consensus       317 ---~~gi~~~~~I--vvyC~-~G~ra~~a~~~L~~----------~G~~~v~~~~GG~~~W~~~~g~Pv~  370 (373)
                         ..+.+++++|  |+||. +|.||..++..|+.          +||++|++|+|||.+|.++ +.|+.
T Consensus       100 ~~~~l~~~~d~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~-g~~~~  168 (211)
T 1qb0_A          100 KSPIAPCSLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQ-HPNFC  168 (211)
T ss_dssp             TTTCCCSSTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTT-CGGGE
T ss_pred             hhhhccccCCCCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHH-Ccccc
Confidence               1233478887  88999 99999999999885          7999999999999999988 77764

>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A

Probab=99.72  E-value=7.3e-18  Score=151.60  Aligned_cols=106  Identities=14%  Similarity=0.133  Sum_probs=85.6

Q ss_pred             CCCcccHHHHHHhcCCC------CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHH
Q 017338           74 KEPVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~------~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~  147 (373)
                      ....|++++|.++++++      +++|||||         +..+|..||||||+|+|+..+..                .
T Consensus        42 ~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR---------~~~Ey~~gHIpGAinip~~~l~~----------------~   96 (211)
T 1qb0_A           42 DLKYISPETMVALLTGKFSNIVDKFVIVDCR---------YPYEYEGGHIKTAVNLPLERDAE----------------S   96 (211)
T ss_dssp             TSCEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHHHH----------------H
T ss_pred             CCCeeCHHHHHHHHhcccccCCCCEEEEECC---------CHHHHccCcCCCCEECCchHHHH----------------H
Confidence            45789999999999863      78999996         45899999999999999976422                1


Q ss_pred             HHH---HcCCCCCCeE--EEEcC-CCCchHHHHHHHHHH----------cCCCceEEecCCHHHHHhCCCCccc
Q 017338          148 AVS---ALGLENKDGL--VVYDG-KGIFSAARVWWMFRV----------FGHDRVWVLDGGLPRWRASGYDVES  205 (373)
Q Consensus       148 ~l~---~~gi~~~~~V--Vvy~~-~g~~~a~ra~~~L~~----------~G~~~v~~L~GG~~~W~~~g~pv~~  205 (373)
                      .+.   .++++++++|  |+||. .|.+ +.++++.|+.          +||++|++|+||+.+|.++|.++..
T Consensus        97 ~~~~~~~l~~~~d~~ivvVvyC~~sG~r-s~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~~  169 (211)
T 1qb0_A           97 FLLKSPIAPCSLDKRVILIFHCEFSSER-GPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCE  169 (211)
T ss_dssp             HHHTTTCCCSSTTSEEEEEEECSSSSSH-HHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEE
T ss_pred             hhhhhhhccccCCCCeEEEEECCCCCcc-HHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccccC
Confidence            222   3444567777  78999 6665 8888888886          7999999999999999999988754

>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}

Probab=99.72  E-value=7.2e-18  Score=143.83  Aligned_cols=108  Identities=19%  Similarity=0.150  Sum_probs=80.2

Q ss_pred             CCcccHHHHHHhcCCC----CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHH
Q 017338           75 EPVVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS  150 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~----~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~  150 (373)
                      ...|++++|.++++++    +++|||||         +. +|..||||||+|+|+..+...         ..+.+.+.+.
T Consensus         4 ~~~Is~~el~~~l~~~~~~~~~~lIDvR---------~~-ey~~gHIpGAinip~~~l~~~---------~~~~l~~~l~   64 (152)
T 2j6p_A            4 YTYIKPEELVELLDNPDSLVKAAVIDCR---------DS-DRDCGFIVNSINMPTISCTEE---------MYEKLAKTLF   64 (152)
T ss_dssp             CEEECHHHHHHHHHSHHHHHTEEEEECC---------ST-TGGGCBCTTCEECCTTTCCHH---------HHHHHHHHHH
T ss_pred             cCccCHHHHHHHHhCCCCCCCEEEEEcC---------cH-HhCcCcCCCcEECChhHhhHH---------HHHHHHHHhc
Confidence            4569999999999763    79999996         34 899999999999999876420         0123433333


Q ss_pred             HcCCCCCCeEEEEc-CCCCchHHHHH----HHHHHcCC--CceEEecCCHHHHHhCCCCccc
Q 017338          151 ALGLENKDGLVVYD-GKGIFSAARVW----WMFRVFGH--DRVWVLDGGLPRWRASGYDVES  205 (373)
Q Consensus       151 ~~gi~~~~~VVvy~-~~g~~~a~ra~----~~L~~~G~--~~v~~L~GG~~~W~~~g~pv~~  205 (373)
                      .   ...+.||+|| ..|.+ +.+++    +.|+.+||  .+|++|+||+.+|.++|.++..
T Consensus        65 ~---~~~~~vV~yC~~sg~r-s~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~~  122 (152)
T 2j6p_A           65 E---EKKELAVFHCAQSLVR-APKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVRP  122 (152)
T ss_dssp             H---TTCCEEEEECSSSSSH-HHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTCG
T ss_pred             c---cCCCEEEEEcCCCCCc-cHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCCC
Confidence            2   2345678889 45554 66666    67888997  5899999999999999887653

>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A

Probab=99.72  E-value=1.2e-17  Score=145.74  Aligned_cols=106  Identities=14%  Similarity=0.146  Sum_probs=81.0

Q ss_pred             CCCcccHHHHHHhcCC------CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHH
Q 017338           74 KEPVVSVDWLHANLRE------PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~------~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~  147 (373)
                      ..+.|++++|.+++++      ++++|||||         +..+|..||||||+|+|+..+..                .
T Consensus        22 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR---------~~~ey~~ghIpgAinip~~~l~~----------------~   76 (175)
T 2a2k_A           22 DLKYISPETMVALLTGKFSNIVDKFVIVDCR---------YPYEYEGGHIKTAVNLPLERDAE----------------S   76 (175)
T ss_dssp             TSCEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHHHH----------------H
T ss_pred             CCceeCHHHHHHHHhcccccCCCCEEEEECC---------CHHHHcCCcCCCcEECChhHHHH----------------H
Confidence            4567999999999986      378999996         45899999999999999976532                1


Q ss_pred             HHHH---cCCCCCCeEE--EEcC-CCCchHHHHHHHHHH----------cCCCceEEecCCHHHHHhCCCCccc
Q 017338          148 AVSA---LGLENKDGLV--VYDG-KGIFSAARVWWMFRV----------FGHDRVWVLDGGLPRWRASGYDVES  205 (373)
Q Consensus       148 ~l~~---~gi~~~~~VV--vy~~-~g~~~a~ra~~~L~~----------~G~~~v~~L~GG~~~W~~~g~pv~~  205 (373)
                      .+..   ++++++++||  +||+ .|.+ +.++++.|+.          +||++|++|+||+.+|.+++.|+..
T Consensus        77 ~~~~~~~~~~~~~~~ivvv~yC~~~g~r-s~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~~~  149 (175)
T 2a2k_A           77 FLLKSPIAPCSLDKRVILIFHSEFSSER-GPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCE  149 (175)
T ss_dssp             HHHSSCCCC----CEEEEEEECSSSSSH-HHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEE
T ss_pred             hhhhhhhccccCCCCeEEEEECCCCCCc-cHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccccC
Confidence            1221   2334677774  4688 5554 8889998885          5999999999999999999988754

>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1

Probab=99.71  E-value=3.2e-18  Score=147.21  Aligned_cols=104  Identities=13%  Similarity=0.186  Sum_probs=84.3

Q ss_pred             cccCHHHHHHHhhC------CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHH
Q 017338          244 LIWTLEQVKRNIEE------GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  317 (373)
Q Consensus       244 ~~is~~el~~~~~~------~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~  317 (373)
                      ..|+++++.+++++      ++++|||+|++.||           ..||||||+|||+.++....            +.+
T Consensus        23 ~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~-----------~~ghIpgAinip~~~~~~~~------------~~~   79 (161)
T 1c25_A           23 KYISPEIMASVLNGKFANLIKEFVIIDCRYPYEY-----------EGGHIKGAVNLHMEEEVEDF------------LLK   79 (161)
T ss_dssp             CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHH-----------HTCEETTCEECCSHHHHHHH------------TTT
T ss_pred             ceeCHHHHHHHHhccccccCCCeEEEECCChHHc-----------cCCcccCcEeCChhHHHHHH------------Hhh
Confidence            46899999999876      37899999999999           79999999999997764321            111


Q ss_pred             c--CCCCCCcE--EEEcC-CchHHHHHHHHHHH----------cCCCCceeecccHHHHhcCCCCCCcC
Q 017338          318 E--GISLEKPV--VTACG-TGVTACILALGLNR----------LGKHDVAVYDGSWTEWGAQPDTPVET  371 (373)
Q Consensus       318 ~--gi~~~~~I--vvyC~-~G~ra~~a~~~L~~----------~G~~~v~~~~GG~~~W~~~~g~Pv~~  371 (373)
                      .  -.+++++|  |+||. +|.||..++..|+.          +||++|++|+||+.+|.++ +.|+..
T Consensus        80 ~~~~~~~~~~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~-~~~~~~  147 (161)
T 1c25_A           80 KPIVPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMK-CQSYCE  147 (161)
T ss_dssp             SCCCCCTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHH-HGGGEE
T ss_pred             hhhccCCCCCeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHH-cccccC
Confidence            1  12577886  68899 99999999999875          4999999999999999988 777654

>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A

Probab=99.71  E-value=7.4e-18  Score=147.02  Aligned_cols=104  Identities=14%  Similarity=0.194  Sum_probs=81.6

Q ss_pred             ccccCHHHHHHHhhC------CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHH
Q 017338          243 HLIWTLEQVKRNIEE------GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE  316 (373)
Q Consensus       243 ~~~is~~el~~~~~~------~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~  316 (373)
                      ...|+++++.+++++      ++++|||||++.||           ..||||||+|||+.++...            .+.
T Consensus        23 ~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey-----------~~ghIpgAinip~~~l~~~------------~~~   79 (175)
T 2a2k_A           23 LKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEY-----------EGGHIKTAVNLPLERDAES------------FLL   79 (175)
T ss_dssp             SCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHH-----------HTCEETTCEECCSHHHHHH------------HHH
T ss_pred             CceeCHHHHHHHHhcccccCCCCEEEEECCCHHHH-----------cCCcCCCcEECChhHHHHH------------hhh
Confidence            346899999999876      36899999999999           7999999999999776421            111


Q ss_pred             H---cCCCCCCcEEE--EcC-CchHHHHHHHHHHH----------cCCCCceeecccHHHHhcCCCCCCc
Q 017338          317 Q---EGISLEKPVVT--ACG-TGVTACILALGLNR----------LGKHDVAVYDGSWTEWGAQPDTPVE  370 (373)
Q Consensus       317 ~---~gi~~~~~Ivv--yC~-~G~ra~~a~~~L~~----------~G~~~v~~~~GG~~~W~~~~g~Pv~  370 (373)
                      .   .+++++++|||  ||+ +|.||..++..|+.          +||++|++|+||+.+|.++ +.|+.
T Consensus        80 ~~~~~~~~~~~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~-~~~~~  148 (175)
T 2a2k_A           80 KSPIAPCSLDKRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQ-HPNFC  148 (175)
T ss_dssp             SSCCCC----CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTT-CGGGE
T ss_pred             hhhhccccCCCCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHH-Ccccc
Confidence            1   12347888854  698 99999999998885          5999999999999999988 77764

>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A

Probab=99.70  E-value=2.3e-17  Score=150.16  Aligned_cols=102  Identities=22%  Similarity=0.323  Sum_probs=86.6

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhh----------CCCcCceecCcccccccCCCCCCCCCCHH
Q 017338           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV----------AHIPGALFFDVDGVADRTTNLPHMLPSEE  143 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~----------gHIpGAi~ip~~~l~~~~~~~~~~l~~~e  143 (373)
                      ...+|+++++.+     +++|||+|         +.++|..          ||||||+|+|+..+.+..          +
T Consensus       119 ~~~~i~~~e~~~-----~~~liDvR---------~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~----------e  174 (230)
T 2eg4_A          119 RDWLLTADEAAR-----HPLLLDVR---------SPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPE----------G  174 (230)
T ss_dssp             GGGBCCHHHHHT-----CSCEEECS---------CHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCT----------T
T ss_pred             ccceeCHHHHhh-----CCeEEeCC---------CHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChH----------H
Confidence            346799999976     67899996         4589998          999999999999875421          1


Q ss_pred             HHHHHHHHcCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCccc
Q 017338          144 AFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (373)
Q Consensus       144 ~~~~~l~~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~  205 (373)
                          .+...+++++++||+||..|.+ |+.++..|+.+| .+|++|+||+.+|.++|+|+++
T Consensus       175 ----~~~~~~~~~~~~iv~~C~~G~r-s~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~~  230 (230)
T 2eg4_A          175 ----LLERLGLQPGQEVGVYCHSGAR-SAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTEP  230 (230)
T ss_dssp             ----HHHHHTCCTTCEEEEECSSSHH-HHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCBC
T ss_pred             ----HHHhcCCCCCCCEEEEcCChHH-HHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCCC
Confidence                4455688999999999997764 999999999999 8999999999999999999863

>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1

Probab=99.70  E-value=2.2e-17  Score=141.94  Aligned_cols=107  Identities=15%  Similarity=0.164  Sum_probs=83.3

Q ss_pred             CCCcccHHHHHHhcCC------CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHH
Q 017338           74 KEPVVSVDWLHANLRE------PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~------~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~  147 (373)
                      ..+.|++++|.+++++      ++++|||||         +..+|..||||||+|+|+..+..                .
T Consensus        21 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR---------~~~e~~~ghIpgAinip~~~~~~----------------~   75 (161)
T 1c25_A           21 DLKYISPEIMASVLNGKFANLIKEFVIIDCR---------YPYEYEGGHIKGAVNLHMEEEVE----------------D   75 (161)
T ss_dssp             TSCEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHHHH----------------H
T ss_pred             CcceeCHHHHHHHHhccccccCCCeEEEECC---------ChHHccCCcccCcEeCChhHHHH----------------H
Confidence            3567999999999986      378999996         45899999999999999986532                1


Q ss_pred             HHHHc--CCCCCCeE--EEEcC-CCCchHHHHHHHHHH----------cCCCceEEecCCHHHHHhCCCCcccC
Q 017338          148 AVSAL--GLENKDGL--VVYDG-KGIFSAARVWWMFRV----------FGHDRVWVLDGGLPRWRASGYDVESS  206 (373)
Q Consensus       148 ~l~~~--gi~~~~~V--Vvy~~-~g~~~a~ra~~~L~~----------~G~~~v~~L~GG~~~W~~~g~pv~~~  206 (373)
                      .+...  -++++++|  |+||. .|.+ +..++..|+.          +||++|++|+||+.+|.+++.|+...
T Consensus        76 ~~~~~~~~~~~~~~ivvv~yC~~sg~r-s~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~~  148 (161)
T 1c25_A           76 FLLKKPIVPTDGKRVIVVFHCEFSSER-GPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEP  148 (161)
T ss_dssp             HTTTSCCCCCTTSEEEEEEECSSSSSH-HHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEES
T ss_pred             HHhhhhhccCCCCCeEEEEEcCCCCcc-hHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccCC
Confidence            11111  12466775  67898 6654 8888888875          49999999999999999999887654

>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*

Probab=99.70  E-value=7e-18  Score=146.43  Aligned_cols=111  Identities=20%  Similarity=0.284  Sum_probs=81.9

Q ss_pred             cccCHHHHHHHhhCC-------CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHH
Q 017338          244 LIWTLEQVKRNIEEG-------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE  316 (373)
Q Consensus       244 ~~is~~el~~~~~~~-------~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~  316 (373)
                      ..|+++++.+++.++       +++|||||+ .||           ..||||||+|||+..+....   ...+++.+.+.
T Consensus        31 ~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey-----------~~GHIpGAiniP~~~l~~~~---~~l~~l~~~~~   95 (169)
T 3f4a_A           31 KYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDY-----------MGGHIKDGWHYAYSRLKQDP---EYLRELKHRLL   95 (169)
T ss_dssp             EEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTC-----------TTCEETTCEECCHHHHHHCH---HHHHHHHHHHH
T ss_pred             cEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHH-----------ccCcCCCCEECCHHHhhccc---ccHHHHHHHHH
Confidence            368999999998753       489999999 889           78999999999998876421   11234444333


Q ss_pred             HcCCC--CCCcEEEEcCCc-hHHHHHHHHHHH----cC--CCCceeecccHHHHhcCCCCCCc
Q 017338          317 QEGIS--LEKPVVTACGTG-VTACILALGLNR----LG--KHDVAVYDGSWTEWGAQPDTPVE  370 (373)
Q Consensus       317 ~~gi~--~~~~IvvyC~~G-~ra~~a~~~L~~----~G--~~~v~~~~GG~~~W~~~~g~Pv~  370 (373)
                      ..+++  .+++|||||.+| .|+..++..|..    .|  +.+|++|+|||.+|..+ +.|.+
T Consensus        96 ~~~~~~~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~-~~~~~  157 (169)
T 3f4a_A           96 EKQADGRGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSV-YGDDE  157 (169)
T ss_dssp             HHHHTSSSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHH-HTTCT
T ss_pred             hhcccccCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHH-cCCcc
Confidence            32222  247999999987 888877755543    35  57899999999999988 55654

>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4

Probab=99.68  E-value=1.1e-16  Score=137.19  Aligned_cols=120  Identities=18%  Similarity=0.253  Sum_probs=84.5

Q ss_pred             CCCcccHHHHHHhcCCC--CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccC--CCCCCCCCCHHHHHHHH
Q 017338           74 KEPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT--TNLPHMLPSEEAFAAAV  149 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~--~~~~~~l~~~e~~~~~l  149 (373)
                      ....|++++|.+++.++  +++|||||         +.++|..||||||+|||+..+....  ..+...+|..+  ...+
T Consensus        13 ~~~~i~~~~l~~~l~~~~~~~~liDvR---------~~~ey~~gHI~gainip~~~~~~~~~~~~l~~~lp~~~--~~~~   81 (157)
T 1whb_A           13 EKGAITAKELYTMMTDKNISLIIMDAR---------RMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDS--KDTW   81 (157)
T ss_dssp             CCSEECHHHHHHHHTCSSSCEEEEEES---------CHHHHHHCCBTTCEEECSSSCCTTCCHHHHHHSCCTTH--HHHH
T ss_pred             cCCccCHHHHHHHHhcCCCCeEEEECC---------CHHHHHhccccCCcccCHHHccCCCcHHHHHHHCChHH--HHHH
Confidence            45679999999999876  89999996         4589999999999999998764311  01112344322  2334


Q ss_pred             HHcCCCCCCeEEEEcCCCCc---hHHHHHHHHHH----c----CCC-ceEEecCCHHHHHhCCCCcccCC
Q 017338          150 SALGLENKDGLVVYDGKGIF---SAARVWWMFRV----F----GHD-RVWVLDGGLPRWRASGYDVESSA  207 (373)
Q Consensus       150 ~~~gi~~~~~VVvy~~~g~~---~a~ra~~~L~~----~----G~~-~v~~L~GG~~~W~~~g~pv~~~~  207 (373)
                      ...+  +.+.||+||..+..   .+++++|.|..    +    |+. +|++|+||+.+|.+. +|+....
T Consensus        82 ~~~~--~~~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~  148 (157)
T 1whb_A           82 KKRG--NVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTN  148 (157)
T ss_dssp             HGGG--TSSEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGGGBSC
T ss_pred             HhcC--CCCEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-ChhhhCC
Confidence            4443  44579999987643   35677788773    2    444 499999999999985 8877654

>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}

Probab=99.68  E-value=2.9e-17  Score=147.79  Aligned_cols=98  Identities=14%  Similarity=0.213  Sum_probs=77.7

Q ss_pred             cccCHHHHHHHhhCC------CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHH
Q 017338          244 LIWTLEQVKRNIEEG------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  317 (373)
Q Consensus       244 ~~is~~el~~~~~~~------~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~  317 (373)
                      ..|+++++.+++.++      +++|||||++.||           ..||||||+|||+.+.            +++.+.+
T Consensus        57 ~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey-----------~~GHIpGAinIP~~~~------------l~~~l~~  113 (216)
T 3op3_A           57 KYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEY-----------LGGHIQGALNLYSQEE------------LFNFFLK  113 (216)
T ss_dssp             EEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHH-----------HTSEETTCEECCSHHH------------HHHHHTS
T ss_pred             CEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHH-----------hcCCccCCEECChHHH------------HHHHHhh
Confidence            468999999999865      6899999999999           7999999999998642            2222221


Q ss_pred             c---CCCCCCc--EEEEcC-CchHHHHHHHHHHHc----------CCCCceeecccHHHHhcC
Q 017338          318 E---GISLEKP--VVTACG-TGVTACILALGLNRL----------GKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       318 ~---gi~~~~~--IvvyC~-~G~ra~~a~~~L~~~----------G~~~v~~~~GG~~~W~~~  364 (373)
                      .   ..+++++  ||+||. +|.||..++..|+..          ||++|++|+|||.+|.++
T Consensus       114 ~~~~~~~~~k~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~  176 (216)
T 3op3_A          114 KPIVPLDTQKRIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPE  176 (216)
T ss_dssp             SCCCCSSTTSEEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTT
T ss_pred             ccccccccCCCCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHh
Confidence            1   1233444  999999 999999999999875          899999999999999886

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}

Probab=99.68  E-value=4.3e-17  Score=163.73  Aligned_cols=102  Identities=25%  Similarity=0.377  Sum_probs=89.4

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 017338           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi  154 (373)
                      .+.|++++|.+++++++.+|||+|         +..+|..||||||+|+|+..+.+                 .+.  ++
T Consensus       373 ~~~i~~~~l~~~~~~~~~~lvDvR---------~~~e~~~ghIpgA~~ip~~~l~~-----------------~~~--~l  424 (474)
T 3tp9_A          373 YANVSPDEVRGALAQQGLWLLDVR---------NVDEWAGGHLPQAHHIPLSKLAA-----------------HIH--DV  424 (474)
T ss_dssp             CEEECHHHHHHTTTTTCCEEEECS---------CHHHHHHCBCTTCEECCHHHHTT-----------------TGG--GS
T ss_pred             ccccCHHHHHHHhcCCCcEEEECC---------CHHHHhcCcCCCCEECCHHHHHH-----------------HHh--cC
Confidence            457999999999988889999996         55899999999999999987654                 122  35


Q ss_pred             CCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCccc
Q 017338          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (373)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~  205 (373)
                      +++++||+||..|.+ |+.+++.|+.+||++|++|+||+.+|.++|+|+++
T Consensus       425 ~~~~~vvv~C~~G~r-a~~a~~~L~~~G~~~v~~~~Gg~~~W~~~g~p~~~  474 (474)
T 3tp9_A          425 PRDGSVCVYCRTGGR-SAIAASLLRAHGVGDVRNMVGGYEAWRGKGFPVEA  474 (474)
T ss_dssp             CSSSCEEEECSSSHH-HHHHHHHHHHHTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred             CCCCEEEEECCCCHH-HHHHHHHHHHcCCCCEEEecChHHHHHhCCCCCCC
Confidence            788999999998775 99999999999999999999999999999999874

>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*

Probab=99.68  E-value=1.1e-17  Score=145.14  Aligned_cols=114  Identities=17%  Similarity=0.203  Sum_probs=80.7

Q ss_pred             CCcccHHHHHHhcCCC-------CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHH
Q 017338           75 EPVVSVDWLHANLREP-------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~-------~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~  147 (373)
                      .+.||+++|.+++.++       +++|||||         + .+|..||||||+|||+..+...       .+..+++.+
T Consensus        30 ~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR---------~-~Ey~~GHIpGAiniP~~~l~~~-------~~~l~~l~~   92 (169)
T 3f4a_A           30 VKYLDPTELHRWMQEGHTTTLREPFQVVDVR---------G-SDYMGGHIKDGWHYAYSRLKQD-------PEYLRELKH   92 (169)
T ss_dssp             EEEECHHHHHHHHHHTSCTTTCCCEEEEECC---------S-TTCTTCEETTCEECCHHHHHHC-------HHHHHHHHH
T ss_pred             CcEeCHHHHHHHHhcCCccCcCCCEEEEECC---------c-hHHccCcCCCCEECCHHHhhcc-------cccHHHHHH
Confidence            4579999999998753       49999996         4 6899999999999999886541       000122332


Q ss_pred             HHHHcCCC--CCCeEEEEcCCCCchHHHHHHHHHH----cC--CCceEEecCCHHHHHhCCCCccc
Q 017338          148 AVSALGLE--NKDGLVVYDGKGIFSAARVWWMFRV----FG--HDRVWVLDGGLPRWRASGYDVES  205 (373)
Q Consensus       148 ~l~~~gi~--~~~~VVvy~~~g~~~a~ra~~~L~~----~G--~~~v~~L~GG~~~W~~~g~pv~~  205 (373)
                      .+...+++  ++++|||||..|..++.+++..|..    .|  +.+|++|+||+.+|.+++.+.+.
T Consensus        93 ~~~~~~~~~~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~~  158 (169)
T 3f4a_A           93 RLLEKQADGRGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDES  158 (169)
T ss_dssp             HHHHHHHTSSSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCTT
T ss_pred             HHHhhcccccCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCccc
Confidence            22222222  2479999999875556776644433    25  57999999999999998887654

>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}

Probab=99.68  E-value=3.9e-17  Score=140.10  Aligned_cols=105  Identities=13%  Similarity=0.198  Sum_probs=78.6

Q ss_pred             cccCHHHHHHHhh--------CCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccc----cCCCCCCHHHH
Q 017338          244 LIWTLEQVKRNIE--------EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLD----ASQTLLPADEL  311 (373)
Q Consensus       244 ~~is~~el~~~~~--------~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~----~~~~~~~~~~l  311 (373)
                      ..|+++++.+.+.        +++.+|||+|++.||           ..||||||+|+|+..+..    ..+.+ +   +
T Consensus        11 ~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~-----------~~ghI~ga~~i~~~~l~~~~~~~~~~~-~---~   75 (158)
T 3tg1_B           11 KIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEY-----------NKSHIQGAVHINCADKISRRRLQQGKI-T---V   75 (158)
T ss_dssp             CEECHHHHHHHHCC----------CEEEECSCHHHH-----------HHCCBTTCEECCCSSHHHHHHHTTSSC-C---H
T ss_pred             cEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHH-----------HhCCCCCceeechhHHHHHhhhhcCcc-c---H
Confidence            3689999999987        457899999999999           899999999999988641    01111 0   0


Q ss_pred             HHHHH------HcCCCCCCcEEEEcCCc---------hHHHHHHHHHHHcCCCCceeecccHHHHhcC
Q 017338          312 KKRFE------QEGISLEKPVVTACGTG---------VTACILALGLNRLGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       312 ~~~~~------~~gi~~~~~IvvyC~~G---------~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~  364 (373)
                      ...+.      .....++++|||||.+|         .+|..++..|+..|| +|++|+|||.+|...
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~  142 (158)
T 3tg1_B           76 LDLISCREGKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQN  142 (158)
T ss_dssp             HHHTCCCCSSCSSTTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSS
T ss_pred             HhhcCCHHHHHHHhccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHH
Confidence            00110      00122578999999999         468999999999999 799999999999876

>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}

Probab=99.67  E-value=1.1e-16  Score=144.01  Aligned_cols=103  Identities=18%  Similarity=0.137  Sum_probs=78.4

Q ss_pred             CCCcccHHHHHHhcCCC------CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHH
Q 017338           74 KEPVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~------~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~  147 (373)
                      ..+.||+++|.+++.++      +++|||||        + ..||..||||||+|||+...                +.+
T Consensus        55 ~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR--------~-~~Ey~~GHIpGAinIP~~~~----------------l~~  109 (216)
T 3op3_A           55 DLKYVNPETVAALLSGKFQGLIEKFYVIDCR--------Y-PYEYLGGHIQGALNLYSQEE----------------LFN  109 (216)
T ss_dssp             SSEEECHHHHHHHHTTTTTTTEEEEEEEECS--------C-HHHHHTSEETTCEECCSHHH----------------HHH
T ss_pred             CCCEeCHHHHHHHHhCCCccccCCEEEEEeC--------c-HHHHhcCCccCCEECChHHH----------------HHH
Confidence            35679999999999875      68999996        4 48999999999999998641                222


Q ss_pred             HHHHcC---CCCCC--eEEEEcC-CCCchHHHHHHHHHHc----------CCCceEEecCCHHHHHhCCCC
Q 017338          148 AVSALG---LENKD--GLVVYDG-KGIFSAARVWWMFRVF----------GHDRVWVLDGGLPRWRASGYD  202 (373)
Q Consensus       148 ~l~~~g---i~~~~--~VVvy~~-~g~~~a~ra~~~L~~~----------G~~~v~~L~GG~~~W~~~g~p  202 (373)
                      .+...+   .++++  +||+||. .|.+ +..++..|+..          ||++|++|+||+.+|.++...
T Consensus       110 ~l~~~~~~~~~~~k~~~VVvyC~~SG~R-s~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~~~  179 (216)
T 3op3_A          110 FFLKKPIVPLDTQKRIIIVFHCEFSSER-GPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEYME  179 (216)
T ss_dssp             HHTSSCCCCSSTTSEEEEEEECCC--CC-HHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGG
T ss_pred             HHhhccccccccCCCCEEEEEeCCCChH-HHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhCcc
Confidence            332222   22333  4999999 6665 88888888876          899999999999999876443

>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}

Probab=99.64  E-value=4.4e-16  Score=133.52  Aligned_cols=112  Identities=19%  Similarity=0.324  Sum_probs=77.4

Q ss_pred             CCCcccHHHHHHhcC--------CCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccc----cCCCCC--CCC
Q 017338           74 KEPVVSVDWLHANLR--------EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD----RTTNLP--HML  139 (373)
Q Consensus        74 ~~~~is~~~l~~~l~--------~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~----~~~~~~--~~l  139 (373)
                      ....|++++|.+++.        +++++|||||         +..+|..||||||+|+|+..+..    ....++  ..+
T Consensus         9 ~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR---------~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~~~~~~   79 (158)
T 3tg1_B            9 SIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCR---------PFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLI   79 (158)
T ss_dssp             --CEECHHHHHHHHCC----------CEEEECS---------CHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCCHHHHT
T ss_pred             CCcEecHHHHHHHHHhcccccCCCCCEEEEEcC---------CHHHHHhCCCCCceeechhHHHHHhhhhcCcccHHhhc
Confidence            356799999999998        4579999996         45899999999999999998531    000010  001


Q ss_pred             CCHHHHHHHHHHcCCCCCCeEEEEcCCCCc--------hHHHHHHHHHHcCCCceEEecCCHHHHHhC
Q 017338          140 PSEEAFAAAVSALGLENKDGLVVYDGKGIF--------SAARVWWMFRVFGHDRVWVLDGGLPRWRAS  199 (373)
Q Consensus       140 ~~~e~~~~~l~~~gi~~~~~VVvy~~~g~~--------~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~  199 (373)
                      +..+. .   ..+...++++||+||..|.+        .+..+++.|+..|| +|++|+||+.+|.+.
T Consensus        80 ~~~~~-~---~~~~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~  142 (158)
T 3tg1_B           80 SCREG-K---DSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQN  142 (158)
T ss_dssp             CCCCS-S---CSSTTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSS
T ss_pred             CCHHH-H---HHHhccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHH
Confidence            10000 0   01112247899999998752        48889999999999 799999999999765

>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4

Probab=99.64  E-value=2.2e-16  Score=135.29  Aligned_cols=119  Identities=18%  Similarity=0.239  Sum_probs=82.0

Q ss_pred             CCCcccHHHHHHhcCCC--CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCC--CCCCCCCCHHHHHHHH
Q 017338           74 KEPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT--NLPHMLPSEEAFAAAV  149 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~--~~~~~l~~~e~~~~~l  149 (373)
                      ....|++++|.+++.++  +++|||||         +.++|..||||||+|||+..+.....  .+...+|..  ....+
T Consensus        18 ~~~~is~~~l~~~l~~~~~~~~liDvR---------~~~ey~~gHI~gAinip~~~l~~~~~~~~l~~~lp~~--~~~l~   86 (157)
T 2gwf_A           18 GSGAITAKELYTMMTDKNISLIIMDAR---------RMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDD--SKDTW   86 (157)
T ss_dssp             -CCEECHHHHHHHHHSTTSCEEEEECS---------CHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSCHH--HHHHH
T ss_pred             CCCccCHHHHHHHHhcCCCCeEEEECC---------CHHHHHhcCccCCcccCHHHcCCCCcHHHHHHHcCHH--HHHHH
Confidence            34679999999998866  89999996         45899999999999999987643110  111224422  22344


Q ss_pred             HHcCCCCCCeEEEEcCCCCc---hHHHHHHHHH----Hc----CCC-ceEEecCCHHHHHhCCCCcccC
Q 017338          150 SALGLENKDGLVVYDGKGIF---SAARVWWMFR----VF----GHD-RVWVLDGGLPRWRASGYDVESS  206 (373)
Q Consensus       150 ~~~gi~~~~~VVvy~~~g~~---~a~ra~~~L~----~~----G~~-~v~~L~GG~~~W~~~g~pv~~~  206 (373)
                      ...+  +.+.||+||..+..   .++++++.|.    .+    |+. +|++|+||+.+|++ .+|....
T Consensus        87 ~~~~--~~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~-~~p~~~~  152 (157)
T 2gwf_A           87 KKRG--NVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLL-CYPQYTT  152 (157)
T ss_dssp             HTTT--TSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHH-HCGGGBS
T ss_pred             HhcC--CCCEEEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHH-HChhhcC
Confidence            4443  45679999987643   3466677766    22    344 49999999999998 4776654

>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*

Probab=99.61  E-value=2.3e-16  Score=162.45  Aligned_cols=98  Identities=22%  Similarity=0.378  Sum_probs=84.3

Q ss_pred             ccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCC
Q 017338          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (373)
Q Consensus       245 ~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~  324 (373)
                      .|+++|+.++++ ++.+|||+|++.||           ..||||||+|+|+.++.+..             .  .+++++
T Consensus       490 ~i~~~~~~~~~~-~~~~~iDvR~~~e~-----------~~ghi~ga~~ip~~~l~~~~-------------~--~l~~~~  542 (588)
T 3ics_A          490 TVQWHEIDRIVE-NGGYLIDVREPNEL-----------KQGMIKGSINIPLDELRDRL-------------E--EVPVDK  542 (588)
T ss_dssp             EECTTTHHHHHH-TTCEEEECSCGGGG-----------GGCBCTTEEECCHHHHTTCG-------------G--GSCSSS
T ss_pred             eecHHHHHHHhc-CCCEEEEcCCHHHH-----------hcCCCCCCEECCHHHHHHHH-------------h--hCCCCC
Confidence            578888888885 46899999999999           89999999999997775432             2  367899


Q ss_pred             cEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCc
Q 017338          325 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE  370 (373)
Q Consensus       325 ~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~  370 (373)
                      +||+||.+|.||..+++.|+.+||+ |++|+|||.+|.+....+++
T Consensus       543 ~iv~~C~~g~rs~~a~~~l~~~G~~-v~~l~GG~~~w~~~~~~~~~  587 (588)
T 3ics_A          543 DIYITCQLGMRGYVAARMLMEKGYK-VKNVDGGFKLYGTVLPERIV  587 (588)
T ss_dssp             CEEEECSSSHHHHHHHHHHHHTTCC-EEEETTHHHHHHHHCGGGCB
T ss_pred             eEEEECCCCcHHHHHHHHHHHcCCc-EEEEcchHHHHHhhhhhhcc
Confidence            9999999999999999999999998 99999999999877445554

>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*

Probab=99.59  E-value=5.3e-16  Score=158.75  Aligned_cols=90  Identities=16%  Similarity=0.264  Sum_probs=76.7

Q ss_pred             cCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCc
Q 017338          246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKP  325 (373)
Q Consensus       246 is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~  325 (373)
                      |+++|+.++  +++++|||+|++.||           ..||||||+|+|+.++.+...               .++++++
T Consensus       475 i~~~~~~~~--~~~~~~iDvR~~~e~-----------~~~~i~ga~~ip~~~l~~~~~---------------~~~~~~~  526 (565)
T 3ntd_A          475 IHFDQIDNL--SEDQLLLDVRNPGEL-----------QNGGLEGAVNIPVDELRDRMH---------------ELPKDKE  526 (565)
T ss_dssp             ECTTTTTSC--CTTEEEEECSCGGGG-----------GGCCCTTCEECCGGGTTTSGG---------------GSCTTSE
T ss_pred             eeHHHHHhC--CCCcEEEEeCCHHHH-----------hcCCCCCcEECCHHHHHHHHh---------------hcCCcCe
Confidence            444554444  457899999999999           788999999999988754321               3788999


Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcC
Q 017338          326 VVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       326 IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~  364 (373)
                      ||+||.+|.||..+++.|+.+|| +|++|+|||.+|.++
T Consensus       527 iv~~c~~g~rs~~a~~~l~~~G~-~v~~l~gG~~~w~~~  564 (565)
T 3ntd_A          527 IIIFSQVGLRGNVAYRQLVNNGY-RARNLIGGYRTYKFA  564 (565)
T ss_dssp             EEEECSSSHHHHHHHHHHHHTTC-CEEEETTHHHHHHHT
T ss_pred             EEEEeCCchHHHHHHHHHHHcCC-CEEEEcChHHHHHhC
Confidence            99999999999999999999999 999999999999876

>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4

Probab=99.56  E-value=3.4e-15  Score=127.88  Aligned_cols=112  Identities=16%  Similarity=0.164  Sum_probs=78.2

Q ss_pred             ccccCHHHHHHHhhCC--CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccC------CCCCCHHHHHHH
Q 017338          243 HLIWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS------QTLLPADELKKR  314 (373)
Q Consensus       243 ~~~is~~el~~~~~~~--~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~------~~~~~~~~l~~~  314 (373)
                      ...|+++|+.+.+.++  +.+|||||++.||           ..||||||+|||+..+....      ..+.  +..++.
T Consensus        14 ~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey-----------~~gHI~gainip~~~~~~~~~~~~l~~~lp--~~~~~~   80 (157)
T 1whb_A           14 KGAITAKELYTMMTDKNISLIIMDARRMQDY-----------QDSCILHSLSVPEEAISPGVTASWIEAHLP--DDSKDT   80 (157)
T ss_dssp             CSEECHHHHHHHHTCSSSCEEEEEESCHHHH-----------HHCCBTTCEEECSSSCCTTCCHHHHHHSCC--TTHHHH
T ss_pred             CCccCHHHHHHHHhcCCCCeEEEECCCHHHH-----------HhccccCCcccCHHHccCCCcHHHHHHHCC--hHHHHH
Confidence            3468999999998866  7899999999999           89999999999997664221      0111  111233


Q ss_pred             HHHcCCCCCCcEEEEcCCchH----HHHHHHHHHH----c----CCC-CceeecccHHHHhcCCCCCCcC
Q 017338          315 FEQEGISLEKPVVTACGTGVT----ACILALGLNR----L----GKH-DVAVYDGSWTEWGAQPDTPVET  371 (373)
Q Consensus       315 ~~~~gi~~~~~IvvyC~~G~r----a~~a~~~L~~----~----G~~-~v~~~~GG~~~W~~~~g~Pv~~  371 (373)
                      +.+.+  ..+.||+||.+|.+    ++.+++.|..    +    ||. +|++|+||+.+|...  +|+..
T Consensus        81 ~~~~~--~~~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~--~p~~~  146 (157)
T 1whb_A           81 WKKRG--NVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC--YPQYT  146 (157)
T ss_dssp             HHGGG--TSSEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH--CGGGB
T ss_pred             HHhcC--CCCEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH--Chhhh
Confidence            44322  34569999987754    3445566652    2    454 499999999999875  66654

>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4

Probab=99.54  E-value=3.6e-15  Score=127.75  Aligned_cols=110  Identities=15%  Similarity=0.189  Sum_probs=76.8

Q ss_pred             ccCHHHHHHHhhCC--CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCC-----CCCCHHHHHHHHHH
Q 017338          245 IWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ-----TLLPADELKKRFEQ  317 (373)
Q Consensus       245 ~is~~el~~~~~~~--~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~-----~~~~~~~l~~~~~~  317 (373)
                      .|+++|+.+.+.++  +.+|||||++.||           ..||||||+|||+..+.....     ...+ +..++.+.+
T Consensus        21 ~is~~~l~~~l~~~~~~~~liDvR~~~ey-----------~~gHI~gAinip~~~l~~~~~~~~l~~~lp-~~~~~l~~~   88 (157)
T 2gwf_A           21 AITAKELYTMMTDKNISLIIMDARRMQDY-----------QDSCILHSLSVPEEAISPGVTASWIEAHLP-DDSKDTWKK   88 (157)
T ss_dssp             EECHHHHHHHHHSTTSCEEEEECSCHHHH-----------HHSCBTTCEECCGGGCCTTCCHHHHHHTSC-HHHHHHHHT
T ss_pred             ccCHHHHHHHHhcCCCCeEEEECCCHHHH-----------HhcCccCCcccCHHHcCCCCcHHHHHHHcC-HHHHHHHHh
Confidence            58999999998866  7999999999999           899999999999987643210     0112 222344443


Q ss_pred             cCCCCCCcEEEEcCCchH----HHHHHHHHH----Hc----CCC-CceeecccHHHHhcCCCCCCc
Q 017338          318 EGISLEKPVVTACGTGVT----ACILALGLN----RL----GKH-DVAVYDGSWTEWGAQPDTPVE  370 (373)
Q Consensus       318 ~gi~~~~~IvvyC~~G~r----a~~a~~~L~----~~----G~~-~v~~~~GG~~~W~~~~g~Pv~  370 (373)
                      .  .+.+.||+||.+|.+    ++.+++.|.    .+    |+. +|++|+||+.+|...  +|..
T Consensus        89 ~--~~~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~--~p~~  150 (157)
T 2gwf_A           89 R--GNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC--YPQY  150 (157)
T ss_dssp             T--TTSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH--CGGG
T ss_pred             c--CCCCEEEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH--Chhh
Confidence            2  244569999987754    333445544    22    454 499999999999875  6664

>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*

Probab=99.52  E-value=7.6e-15  Score=150.13  Aligned_cols=93  Identities=20%  Similarity=0.305  Sum_probs=77.7

Q ss_pred             CcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 017338           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (373)
Q Consensus        76 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~  155 (373)
                      ..|++++|.++  +++++|||||        + .+||..||||||+|+|+..+..                 .+..  ++
T Consensus       473 ~~i~~~~~~~~--~~~~~~iDvR--------~-~~e~~~~~i~ga~~ip~~~l~~-----------------~~~~--~~  522 (565)
T 3ntd_A          473 TPIHFDQIDNL--SEDQLLLDVR--------N-PGELQNGGLEGAVNIPVDELRD-----------------RMHE--LP  522 (565)
T ss_dssp             CEECTTTTTSC--CTTEEEEECS--------C-GGGGGGCCCTTCEECCGGGTTT-----------------SGGG--SC
T ss_pred             ceeeHHHHHhC--CCCcEEEEeC--------C-HHHHhcCCCCCcEECCHHHHHH-----------------HHhh--cC
Confidence            45788888776  5579999996        4 4899999999999999988754                 1122  46


Q ss_pred             CCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCC
Q 017338          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  200 (373)
Q Consensus       156 ~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g  200 (373)
                      ++++||+||..|. +|.++++.|+..|| +|++|+||+.+|+++|
T Consensus       523 ~~~~iv~~c~~g~-rs~~a~~~l~~~G~-~v~~l~gG~~~w~~~g  565 (565)
T 3ntd_A          523 KDKEIIIFSQVGL-RGNVAYRQLVNNGY-RARNLIGGYRTYKFAS  565 (565)
T ss_dssp             TTSEEEEECSSSH-HHHHHHHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred             CcCeEEEEeCCch-HHHHHHHHHHHcCC-CEEEEcChHHHHHhCc
Confidence            8899999998765 49999999999999 9999999999999875

>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*

Probab=99.47  E-value=2.7e-14  Score=146.94  Aligned_cols=94  Identities=15%  Similarity=0.163  Sum_probs=79.1

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 017338           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi  154 (373)
                      ...|++++|.+++++ +++|||||        + .+||..||||||+|+|+..+.+                 .+..  +
T Consensus       488 ~~~i~~~~~~~~~~~-~~~~iDvR--------~-~~e~~~ghi~ga~~ip~~~l~~-----------------~~~~--l  538 (588)
T 3ics_A          488 VDTVQWHEIDRIVEN-GGYLIDVR--------E-PNELKQGMIKGSINIPLDELRD-----------------RLEE--V  538 (588)
T ss_dssp             CCEECTTTHHHHHHT-TCEEEECS--------C-GGGGGGCBCTTEEECCHHHHTT-----------------CGGG--S
T ss_pred             cceecHHHHHHHhcC-CCEEEEcC--------C-HHHHhcCCCCCCEECCHHHHHH-----------------HHhh--C
Confidence            456999999998864 68999996        4 4899999999999999987654                 2222  4


Q ss_pred             CCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhC
Q 017338          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS  199 (373)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~  199 (373)
                      +++++||+||..|. +|.++++.|+..||+ |++|+||+.+|+++
T Consensus       539 ~~~~~iv~~C~~g~-rs~~a~~~l~~~G~~-v~~l~GG~~~w~~~  581 (588)
T 3ics_A          539 PVDKDIYITCQLGM-RGYVAARMLMEKGYK-VKNVDGGFKLYGTV  581 (588)
T ss_dssp             CSSSCEEEECSSSH-HHHHHHHHHHHTTCC-EEEETTHHHHHHHH
T ss_pred             CCCCeEEEECCCCc-HHHHHHHHHHHcCCc-EEEEcchHHHHHhh
Confidence            67889999998765 589999999999998 99999999999865

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}

Probab=99.44  E-value=7.8e-15  Score=147.00  Aligned_cols=87  Identities=13%  Similarity=0.160  Sum_probs=0.0

Q ss_pred             HHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEE
Q 017338           83 LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVV  162 (373)
Q Consensus        83 l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~~~~~VVv  162 (373)
                      +.+++++++++|||||         +.+||..||||||+|+|+..+.+                 .+..  ++++++||+
T Consensus       379 ~~~~~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~l~~-----------------~~~~--l~~~~~iv~  430 (466)
T 3r2u_A          379 HSEDITGNESHILDVR---------NDNEWNNGHLSQAVHVPHGKLLE-----------------TDLP--FNKNDVIYV  430 (466)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHhCCCcEEEEeC---------CHHHHhcCcCCCCEECCHHHHHH-----------------HHhh--CCCCCeEEE
Confidence            3344445578899996         44899999999999999987643                 2222  467889999


Q ss_pred             EcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHh
Q 017338          163 YDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (373)
Q Consensus       163 y~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~  198 (373)
                      ||..|.+ |+.+++.|+.+||++|++|+||+.+|++
T Consensus       431 ~C~~G~r-s~~a~~~L~~~G~~~v~~l~GG~~~W~~  465 (466)
T 3r2u_A          431 HCQSGIR-SSIAIGILEHKGYHNIINVNEGYKDIQL  465 (466)
T ss_dssp             ------------------------------------
T ss_pred             ECCCChH-HHHHHHHHHHcCCCCEEEecChHHHHhh
Confidence            9997765 8999999999999999999999999975

>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}

Probab=97.44  E-value=0.00019  Score=60.43  Aligned_cols=96  Identities=17%  Similarity=0.165  Sum_probs=54.4

Q ss_pred             cCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCC--CCCcc-cCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCC
Q 017338          246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRK--GIRSG-HVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  322 (373)
Q Consensus       246 is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~--~~~~G-hIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~  322 (373)
                      ++.+++..+.+.+-..|||+|++.|.... +....  ....+ +|.|.+|+|+...      -.+.+.+.+.+.... ..
T Consensus        30 ~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~-p~~~~~~~~~~~~gi~~~~~iPv~~~------~~~~~~~~~~~~~l~-~~  101 (156)
T 2f46_A           30 LTKADAEQIAQLGIKTIICNRPDREEESQ-PDFAQIKQWLEQAGVTGFHHQPVTAR------DIQKHDVETFRQLIG-QA  101 (156)
T ss_dssp             CCGGGHHHHHHHTCCEEEECSCTTSSTTC-CCHHHHHHHHGGGTCCEEEECCCCTT------TCCHHHHHHHHHHHH-TS
T ss_pred             CCHHHHHHHHHCCCCEEEECCCCccccCC-CcHHHHHHHHHHCCCHhheECccCCC------CCCHHHHHHHHHHHH-hC
Confidence            34555555444344679999988764210 00000  00123 4888999998642      123455554443221 24


Q ss_pred             CCcEEEEcCCchHHHHHHHH-HHHcCCC
Q 017338          323 EKPVVTACGTGVTACILALG-LNRLGKH  349 (373)
Q Consensus       323 ~~~IvvyC~~G~ra~~a~~~-L~~~G~~  349 (373)
                      +++|+|||.+|.|+..++.+ |...|+.
T Consensus       102 ~~pVlvHC~sG~Rs~~l~al~l~~~g~~  129 (156)
T 2f46_A          102 EYPVLAYCRTGTRCSLLWGFRRAAEGMP  129 (156)
T ss_dssp             CSSEEEECSSSHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHHcCCC
Confidence            78999999999998855444 2445654

>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}

Probab=96.78  E-value=0.0016  Score=54.74  Aligned_cols=110  Identities=12%  Similarity=0.076  Sum_probs=58.2

Q ss_pred             ccHHHHHHhcCCCCeEEEEeecCCCCCCC-CC----hhhhhhC-CCcCceecCcccccccCCCCCCCCCCHHHHHHHHHH
Q 017338           78 VSVDWLHANLREPDLKVLDASWYMPDEQR-NP----FQEYQVA-HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (373)
Q Consensus        78 is~~~l~~~l~~~~~~iiDvR~~~~~~~r-~~----~~ey~~g-HIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~  151 (373)
                      ++++++..+.+.+-..|||+|..  .+.. .|    ..+|..+ +|+|.+|+|+...          -++.+.+.+++..
T Consensus        30 ~~~~d~~~L~~~Gi~~IIdlR~~--~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~----------~~~~~~~~~~~~~   97 (156)
T 2f46_A           30 LTKADAEQIAQLGIKTIICNRPD--REEESQPDFAQIKQWLEQAGVTGFHHQPVTAR----------DIQKHDVETFRQL   97 (156)
T ss_dssp             CCGGGHHHHHHHTCCEEEECSCT--TSSTTCCCHHHHHHHHGGGTCCEEEECCCCTT----------TCCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHCCCCEEEECCCC--ccccCCCcHHHHHHHHHHCCCHhheECccCCC----------CCCHHHHHHHHHH
Confidence            35555555443333579999821  0000 00    0023344 5999999998642          1345566655554


Q ss_pred             cCCCCCCeEEEEcCCCCchHHHHHHH-HHHcCCCceEEecCCHHHHHhCCCCccc
Q 017338          152 LGLENKDGLVVYDGKGIFSAARVWWM-FRVFGHDRVWVLDGGLPRWRASGYDVES  205 (373)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~ra~~~-L~~~G~~~v~~L~GG~~~W~~~g~pv~~  205 (373)
                      +. ..+.+|+|||..|.+ ++.++.+ |...|.+.-.    -+..-++.|+.++.
T Consensus        98 l~-~~~~pVlvHC~sG~R-s~~l~al~l~~~g~~~~~----a~~~~~~~g~~l~~  146 (156)
T 2f46_A           98 IG-QAEYPVLAYCRTGTR-CSLLWGFRRAAEGMPVDE----IIRRAQAAGVNLEN  146 (156)
T ss_dssp             HH-TSCSSEEEECSSSHH-HHHHHHHHHHHTTCCHHH----HHHHHHHTTCCCGG
T ss_pred             HH-hCCCCEEEECCCCCC-HHHHHHHHHHHcCCCHHH----HHHHHHHcCCCcHH
Confidence            42 246899999999885 5543332 2445653111    12334556665543

>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A

Probab=91.09  E-value=0.39  Score=38.94  Aligned_cols=86  Identities=16%  Similarity=0.206  Sum_probs=44.9

Q ss_pred             HHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCC--cccCcccccccCCCCCCHHHHHHHHHHc--CCCCC
Q 017338          248 LEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGS--KCIPFPQMLDASQTLLPADELKKRFEQE--GISLE  323 (373)
Q Consensus       248 ~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA--~~ip~~~l~~~~~~~~~~~~l~~~~~~~--gi~~~  323 (373)
                      .+++..+...+=..|||+|+..+.           .....+|-  +++|+.+.     ...+.+.+.+.+...  .+..+
T Consensus        25 ~~~~~~L~~~gi~~Vi~l~~~~~~-----------~~~~~~~~~~~~~~~~d~-----~~~~~~~~~~~~~~i~~~~~~~   88 (150)
T 4erc_A           25 PAHYQFLLDLGVRHLVSLTERGPP-----------HSDSCPGLTLHRLRIPDF-----CPPAPDQIDRFVQIVDEANARG   88 (150)
T ss_dssp             HHHHHHHHHTTEEEEEECSSSCCT-----------TGGGCTTSEEEECCCCTT-----SCCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHCCCCEEEEcCCCCCC-----------cccccCCceEEEEecCCC-----CCCCHHHHHHHHHHHHHHHHCC
Confidence            444444433344679999987654           11222232  24454432     122344444433311  12356


Q ss_pred             CcEEEEcCCch-HHHH-HHH-HHHHcCCC
Q 017338          324 KPVVTACGTGV-TACI-LAL-GLNRLGKH  349 (373)
Q Consensus       324 ~~IvvyC~~G~-ra~~-a~~-~L~~~G~~  349 (373)
                      .+|+|+|..|. |+.. ++. .+...|++
T Consensus        89 ~~vlVHC~~G~~Rsg~~~a~~l~~~~~~~  117 (150)
T 4erc_A           89 EAVGVHCALGFGRTGTMLACYLVKERGLA  117 (150)
T ss_dssp             CEEEEECSSSSHHHHHHHHHHHHHHHTCC
T ss_pred             CCEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence            89999999987 7663 333 34456763

>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A

Probab=89.71  E-value=0.76  Score=37.39  Aligned_cols=43  Identities=14%  Similarity=0.111  Sum_probs=27.3

Q ss_pred             CHHHHHHHHHHcCCCCCCcEEEEcCCch-HHHHH-HHHHHHcCCC
Q 017338          307 PADELKKRFEQEGISLEKPVVTACGTGV-TACIL-ALGLNRLGKH  349 (373)
Q Consensus       307 ~~~~l~~~~~~~gi~~~~~IvvyC~~G~-ra~~a-~~~L~~~G~~  349 (373)
                      +.+.+.+.+....-..+.+|+|+|..|. |+..+ +..|...|++
T Consensus        76 ~~~~~~~~~~~i~~~~~~~vlvHC~aG~~RTg~~~a~~l~~~g~~  120 (151)
T 1xri_A           76 PDHKIRMALKVLLDEKNHPVLIHCKRGKHRTGCLVGCLRKLQKWC  120 (151)
T ss_dssp             CHHHHHHHHHHHHCGGGCSEEEECSSSSSHHHHHHHHHHHHTTBC
T ss_pred             CHHHHHHHHHHHHcCCCCCEEEECCCCCCHHHHHHHHHHHHhCCC
Confidence            3456666665432235689999999986 76654 4445567764

>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}

Probab=86.41  E-value=2.2  Score=34.27  Aligned_cols=85  Identities=14%  Similarity=0.178  Sum_probs=42.9

Q ss_pred             HHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCC--CCcccCcccccccCCCCCCHHHHHHHHHHc--CCCCCC
Q 017338          249 EQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVP--GSKCIPFPQMLDASQTLLPADELKKRFEQE--GISLEK  324 (373)
Q Consensus       249 ~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIp--GA~~ip~~~l~~~~~~~~~~~~l~~~~~~~--gi~~~~  324 (373)
                      +++....+.+=..|||.|+..|+..           ..++  +-+++|+.+..     ..+.+.+.+.+...  .+..+.
T Consensus        27 ~~~~~l~~~gi~~Vv~l~~~~e~~~-----------~~~~~~~~~~~~~~d~~-----~p~~~~~~~~~~~i~~~~~~~~   90 (151)
T 2img_A           27 AHYQFLLDLGVRHLVSLTERGPPHS-----------DSCPGLTLHRLRIPDFC-----PPAPDQIDRFVQIVDEANARGE   90 (151)
T ss_dssp             HHHHHHHHTTEEEEEECSSSCCTTG-----------GGCTTSEEEECCCCTTC-----CCCHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHCCCCEEEECCCCCCCCH-----------HHHhhCCeEEEeCCCCC-----CCCHHHHHHHHHHHHHHHhCCC
Confidence            3443333333457999998866521           1111  13455654322     22334444433311  123468


Q ss_pred             cEEEEcCCch-HHHHH-HHHHHH-cCCC
Q 017338          325 PVVTACGTGV-TACIL-ALGLNR-LGKH  349 (373)
Q Consensus       325 ~IvvyC~~G~-ra~~a-~~~L~~-~G~~  349 (373)
                      +|+|+|..|. |+... +..|.. .|++
T Consensus        91 ~vlVHC~aG~~Rsg~~~~~~l~~~~~~~  118 (151)
T 2img_A           91 AVGVHCALGFGRTGTMLACYLVKERGLA  118 (151)
T ss_dssp             EEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred             cEEEECCCCCChHHHHHHHHHHHHhCcC
Confidence            9999999886 66543 333333 3653

>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1

Probab=81.82  E-value=0.25  Score=41.79  Aligned_cols=26  Identities=23%  Similarity=0.188  Sum_probs=22.4

Q ss_pred             cEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccc
Q 017338          260 YQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLD  300 (373)
Q Consensus       260 ~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~  300 (373)
                      .++||+|.+.||           .    |||+|+|...+.-
T Consensus       122 ~~liDvRe~~E~-----------~----pgA~~iprg~lE~  147 (168)
T 1v8c_A          122 GAVVRFREVEPL-----------K----VGSLSIPQLRVEV  147 (168)
T ss_dssp             TEEEEEEEEEEE-----------E----ETTEEEEEEEEEE
T ss_pred             eEEEECCChhhc-----------C----CCCEEcChhHHHH
Confidence            589999999999           5    9999999877643

>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A

Probab=80.38  E-value=4.7  Score=32.27  Aligned_cols=45  Identities=11%  Similarity=0.126  Sum_probs=25.7

Q ss_pred             CCCHHHHHHHHHHcC--CCCCCeEEEEcCCCCchHHH--HHHHHHHcCC
Q 017338          139 LPSEEAFAAAVSALG--LENKDGLVVYDGKGIFSAAR--VWWMFRVFGH  183 (373)
Q Consensus       139 l~~~e~~~~~l~~~g--i~~~~~VVvy~~~g~~~a~r--a~~~L~~~G~  183 (373)
                      .|+.+.+.+.+..+.  ...+.+|+|+|..|..++..  +++++...|+
T Consensus        68 ~~~~~~~~~~~~~i~~~~~~~~~vlVHC~~G~~Rsg~~~a~~l~~~~~~  116 (150)
T 4erc_A           68 PPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGL  116 (150)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSHHHHHHHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence            355565555544332  13567999999988755543  3333444555

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	373
d1okga1	156	c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransf	1e-35
d1okga1	156	c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransf	0.002
d1rhsa2	144	c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [	2e-35
d1rhsa2	144	c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [	8e-08
d1rhsa1	149	c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [Ta	5e-34
d1rhsa1	149	c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [Ta	0.001
d1urha1	147	c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransf	1e-32
d1urha1	147	c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransf	2e-08
d1okga2	139	c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtran	1e-29
d1okga2	139	c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtran	4e-07
d1uara2	141	c.46.1.2 (A:145-285) Sulfurtransferase {Thermus th	5e-28
d1uara2	141	c.46.1.2 (A:145-285) Sulfurtransferase {Thermus th	4e-07
d1urha2	120	c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtran	2e-27
d1urha2	120	c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtran	2e-06
d1e0ca2	136	c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacte	2e-25
d1e0ca2	136	c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacte	7e-12
d1uara1	143	c.46.1.2 (A:2-144) Sulfurtransferase {Thermus ther	9e-24
d1uara1	143	c.46.1.2 (A:2-144) Sulfurtransferase {Thermus ther	1e-07
d1hzma_	154	c.46.1.1 (A:) Erk2 binding domain of Mapk phosphat	5e-16
d1hzma_	154	c.46.1.1 (A:) Erk2 binding domain of Mapk phosphat	0.003
d1e0ca1	135	c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter	8e-14
d1e0ca1	135	c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter	5e-06
d2gwfa1	135	c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal h	7e-10
d1gmxa_	108	c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia	4e-09
d1gmxa_	108	c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia	7e-09
d1tq1a_	119	c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senesc	1e-08
d1tq1a_	119	c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senesc	4e-06
d1yt8a3	157	c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase	4e-08
d1yt8a2	101	c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase P	1e-07
d1t3ka_	132	c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {	2e-07
d1yt8a1	136	c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase	5e-07
d1c25a_	161	c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId:	0.003

>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]} Length = 156

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

 Score =  125 bits (315), Expect = 1e-35
 Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 8/137 (5%)

Query: 73  PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR- 131
           P +  +    +  +L   + +++D  + +  +  +   +Y   H+  A+  DVD    + 
Sbjct: 5   PGKVFLDPSEVADHLA--EYRIVDCRYSLKIK-DHGSIQYAKEHVKSAIRADVDTNLSKL 61

Query: 132 --TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK-GIFSAARVWWMFRVFGHDRVWV 188
             T+   H LP    F     A G+  +  ++ YD + G     R+WWM    G D  +V
Sbjct: 62  VPTSTARHPLPPCAEFIDWCMANGMAGELPVLCYDDECGAMGGCRLWWMLNSLGAD-AYV 120

Query: 189 LDGGLPRWRASGYDVES 205
           ++GG    +A+G ++ES
Sbjct: 121 INGGFQACKAAGLEMES 137

>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]} Length = 156

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

 Score = 36.2 bits (83), Expect = 0.002
 Identities = 21/131 (16%), Positives = 35/131 (26%), Gaps = 14/131 (10%)

Query: 249 EQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ----- 303
            +V  ++ E  Y++VD R                   HV  +        L         
Sbjct: 13  SEVADHLAE--YRIVDCRY---SLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTA 67

Query: 304 --TLLPADELKKRFEQEGISLEKP-VVTACGTGVTACILALGLNRLGKHDVAVYDGSWTE 360
              L P  E        G++ E P +      G         +      D  V +G +  
Sbjct: 68  RHPLPPCAEFIDWCMANGMAGELPVLCYDDECGAMGGCRLWWMLNSLGADAYVINGGFQA 127

Query: 361 WGAQPDTPVET 371
             A     +E+
Sbjct: 128 CKAA-GLEMES 137

>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} Length = 144

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  124 bits (312), Expect = 2e-35
 Identities = 58/140 (41%), Positives = 78/140 (55%), Gaps = 3/140 (2%)

Query: 235 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCI 293
            F+      L+ T EQV  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +
Sbjct: 2   IFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNM 61

Query: 294 PFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAV 353
           PF   L         +EL+  FE + + L KP++  C  GVTAC +AL     GK DVA+
Sbjct: 62  PFMNFLTEDGFEKSPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAI 121

Query: 354 YDGSWTEWG--AQPDTPVET 371
           YDGSW EW   A P+T V  
Sbjct: 122 YDGSWFEWFHRAPPETWVSQ 141

>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} Length = 144

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 48.7 bits (115), Expect = 8e-08
 Identities = 20/128 (15%), Positives = 39/128 (30%), Gaps = 2/128 (1%)

Query: 74  KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT 133
           +  + + + +  NL     +++D+          P  +  V    G +   V+       
Sbjct: 9   RSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDA-VGLDSGHIRGSVNMPFMNFL 67

Query: 134 NLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGL 193
                  S E   A   A  ++    L+    KG  +A  +     + G   V + DG  
Sbjct: 68  TEDGFEKSPEELRAMFEAKKVDLTKPLIATCRKG-VTACHIALAAYLCGKPDVAIYDGSW 126

Query: 194 PRWRASGY 201
             W     
Sbjct: 127 FEWFHRAP 134

>d1rhsa1 c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} Length = 149

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  121 bits (303), Expect = 5e-34
 Identities = 66/139 (47%), Positives = 81/139 (58%), Gaps = 7/139 (5%)

Query: 76  PVVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR 131
            +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+
Sbjct: 8   ALVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDK 66

Query: 132 TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVL 189
            +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL
Sbjct: 67  ASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVL 126

Query: 190 DGGLPRWRASGYDVESSAS 208
           +GG   W   G+ V S  S
Sbjct: 127 NGGFRNWLKEGHPVTSEPS 145

>d1rhsa1 c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} Length = 149

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.2 bits (85), Expect = 0.001
 Identities = 28/133 (21%), Positives = 43/133 (32%), Gaps = 11/133 (8%)

Query: 246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS--- 302
           W  E V+        +++DA     +     E RK     HVPG+      +  D +   
Sbjct: 14  WLAESVRAGKVGPGLRVLDASW---YSPGTREARKEYLERHVPGASFFDIEECRDKASPY 70

Query: 303 -QTLLPADELKKRFEQEGISLEKPVVTACG---TGVTACILALGLNRLGKHDVAVYDGSW 358
              L             GIS +  VV   G       A  +       G   V+V +G +
Sbjct: 71  EVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGF 130

Query: 359 TEWGAQPDTPVET 371
             W  +   PV +
Sbjct: 131 RNWLKE-GHPVTS 142

>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} Length = 147

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

 Score =  117 bits (294), Expect = 1e-32
 Identities = 58/134 (43%), Positives = 81/134 (60%), Gaps = 1/134 (0%)

Query: 76  PVVSVDWLHANLREPDLKVLDASWYMPD-EQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
             V  DWL  ++ +P+++++DA    P  E RN  QEY   HIPGA+FFD++ ++D T+ 
Sbjct: 3   WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSP 62

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           LPHMLP  E FA A+  LG+     L+VYD   +FSA R WWM R FG ++V +L GGL 
Sbjct: 63  LPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLA 122

Query: 195 RWRASGYDVESSAS 208
            W+     +E  A 
Sbjct: 123 GWQRDDLLLEEGAV 136

>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} Length = 147

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

 Score = 51.0 bits (121), Expect = 2e-08
 Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 7/128 (5%)

Query: 249 EQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQT---- 304
           + +  +I++   Q++DAR  +    D     +   +GH+PG+       + D +      
Sbjct: 8   DWLAEHIDDPEIQIIDARMASPGQED-RNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHM 66

Query: 305 LLPADELKKRFEQEGISLEKPVVTAC-GTGVTACILALGLNRLGKHDVAVYDGSWTEWGA 363
           L   +       + G++ +K ++    G   +A      L   G   V++  G    W  
Sbjct: 67  LPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQR 126

Query: 364 QPDTPVET 371
             D  +E 
Sbjct: 127 D-DLLLEE 133

>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

 Score =  109 bits (272), Expect = 1e-29
 Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 8/120 (6%)

Query: 261 QLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA--------SQTLLPADELK 312
            + DARS  RF             GH+ G++ +P+   L          S+  +  + + 
Sbjct: 14  IITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMT 73

Query: 313 KRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS 372
                   +     V +CG+GVTACI    ++ LG     +Y GSW+E+      P+  S
Sbjct: 74  VVQGAGDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRS 133

>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

 Score = 46.7 bits (110), Expect = 4e-07
 Identities = 19/130 (14%), Positives = 30/130 (23%), Gaps = 10/130 (7%)

Query: 90  PDLKVLDASWYMPDE----QRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAF 145
           P   + DA     D      R    +    HI GA             +   +   EE  
Sbjct: 11  PQAIITDARS--ADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIR 68

Query: 146 ---AAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGY 201
                 V   G        V+      +A     +    G    ++  G    +      
Sbjct: 69  HNIMTVVQGAGDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRP 128

Query: 202 DVESSASGDA 211
            +  S   D 
Sbjct: 129 PIMRSIIDDY 138

>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]} Length = 141

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

 Score =  104 bits (261), Expect = 5e-28
 Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 6/130 (4%)

Query: 248 LEQVKRNIEEGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGSKCIPFPQMLDAS 302
           + +    ++EG   LVD RS   + G+            +R+GH+PG+K IP+ + ++  
Sbjct: 9   VLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPD 68

Query: 303 QTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEW 361
            T   A+EL+  +E  GI+ +K +V  C     +      L   LG   V  YDGSWTEW
Sbjct: 69  GTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEW 128

Query: 362 GAQPDTPVET 371
           G     P+  
Sbjct: 129 GNLVGVPIAK 138

>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]} Length = 141

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 46.8 bits (110), Expect = 4e-07
 Identities = 23/122 (18%), Positives = 37/122 (30%), Gaps = 17/122 (13%)

Query: 85  ANLREPDLKVLDA----------SWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
             ++E    ++D           +      Q    +     HIPGA          +  N
Sbjct: 14  IKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAG---HIPGAKNIPWA----KAVN 66

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
                 S E   A    LG+     +VVY      S+   + +  + G+  V   DG   
Sbjct: 67  PDGTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWT 126

Query: 195 RW 196
            W
Sbjct: 127 EW 128

>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} Length = 120

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

 Score =  102 bits (255), Expect = 2e-27
 Identities = 46/120 (38%), Positives = 71/120 (59%), Gaps = 1/120 (0%)

Query: 242 PHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA 301
           P  +  +  V     E T Q++DAR  ARF+ +  EPR G+R GH+PG+  +P+ ++   
Sbjct: 2   PEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTEL-VR 60

Query: 302 SQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 361
              L   DEL   F   G+S +KP++ +CG+GVTA ++ L L  L   +V +YDG+W+EW
Sbjct: 61  EGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEW 120

>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} Length = 120

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

 Score = 44.2 bits (103), Expect = 2e-06
 Identities = 28/126 (22%), Positives = 42/126 (33%), Gaps = 10/126 (7%)

Query: 74  KEPVVSVDWLHANLREPDLKVLDA---SWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD 130
            E VV V  +     E   +++DA   + +   E   P    +  HIPGAL         
Sbjct: 2   PEAVVKVTDVLLASHENTAQIIDARPAARFN-AEVDEPRPGLRRGHIPGALNVP-----W 55

Query: 131 RTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLD 190
                   L + +   A     G+     ++V  G G+  AA V           V + D
Sbjct: 56  TELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVT-AAVVLLALATLDVPNVKLYD 114

Query: 191 GGLPRW 196
           G    W
Sbjct: 115 GAWSEW 120

>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} Length = 136

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

 Score = 98.1 bits (243), Expect = 2e-25
 Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 5/139 (3%)

Query: 232 GPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSK 291
           GP             + + +   +      + DARS   +     E     + GH+PG+ 
Sbjct: 2   GPVAL--SLHDEPTASRDYLLGRLGAADLAIWDARSPQEY---RGEKVLAAKGGHIPGAV 56

Query: 292 CIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDV 351
              +   +D S+ L    ++  R E+ GI+ +K +VT C T   + +  L    LG   V
Sbjct: 57  NFEWTAAMDPSRALRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRV 116

Query: 352 AVYDGSWTEWGAQPDTPVE 370
             Y GSW EWG  PDTPVE
Sbjct: 117 KGYAGSWGEWGNHPDTPVE 135

>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} Length = 136

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

 Score = 60.3 bits (145), Expect = 7e-12
 Identities = 32/139 (23%), Positives = 44/139 (31%), Gaps = 10/139 (7%)

Query: 68  TLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVA-HIPGALFFDVD 126
            LS+   EP  S D+L   L   DL + DA    P E R          HIPGA+ F+  
Sbjct: 5   ALSLHD-EPTASRDYLLGRLGAADLAIWDARS--PQEYRGEKVLAAKGGHIPGAVNFE-- 59

Query: 127 GVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRV 186
                    P          A          D  +V   +    +   + + +  G+ RV
Sbjct: 60  ---WTAAMDPSRALRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRV 116

Query: 187 WVLDGGLPRW-RASGYDVE 204
               G    W       VE
Sbjct: 117 KGYAGSWGEWGNHPDTPVE 135

>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]} Length = 143

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 93.8 bits (232), Expect = 9e-24
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 10/133 (7%)

Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           E +VS DW+  +L +P ++VL+               Y   HIPGA   D     D    
Sbjct: 6   EVLVSTDWVQEHLEDPKVRVLEVDE--------DILLYDTGHIPGAQKIDWQR--DFWDP 55

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           +     SEE FA  +  LG+ N   +V+Y  K  + AA  +W F+  GH  V +++GG  
Sbjct: 56  VVRDFISEEEFAKLMERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQ 115

Query: 195 RWRASGYDVESSA 207
           +W   G  + +  
Sbjct: 116 KWVEEGRPLTTEV 128

>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]} Length = 143

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 48.3 bits (114), Expect = 1e-07
 Identities = 25/133 (18%), Positives = 54/133 (40%), Gaps = 14/133 (10%)

Query: 242 PHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLD- 300
           P ++ + + V+ ++E+   ++++            E      +GH+PG++ I + +    
Sbjct: 5   PEVLVSTDWVQEHLEDPKVRVLEVD----------EDILLYDTGHIPGAQKIDWQRDFWD 54

Query: 301 -ASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSW 358
              +  +  +E  K  E+ GIS +  VV            A    +  G  DV + +G  
Sbjct: 55  PVVRDFISEEEFAKLMERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGR 114

Query: 359 TEWGAQPDTPVET 371
            +W  +   P+ T
Sbjct: 115 QKWVEE-GRPLTT 126

>d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 154

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Erk2 binding domain of Mapk phosphatase mkp-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (177), Expect = 5e-16
 Identities = 23/144 (15%), Positives = 49/144 (34%), Gaps = 27/144 (18%)

Query: 71  VSPKEPVVSVDWLHANLREPDLKV--LDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGV 128
            S      +V WL+  L   + ++  +D           P + Y+ +HI  A+   + G+
Sbjct: 11  ASEMAISKTVAWLNEQLELGNERLLLMDCR---------PQELYESSHIESAINVAIPGI 61

Query: 129 ADR-----TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG------IFSAARVWWM 177
             R        +  +    E              D +V+YD             + +  +
Sbjct: 62  MLRRLQKGNLPVRALFTRGEDRD---RFTRRCGTDTVVLYDESSSDWNENTGGESLLGLL 118

Query: 178 FRVFGHD--RVWVLDGGLPRWRAS 199
            +    +  R + L+GG  +++A 
Sbjct: 119 LKKLKDEGCRAFYLEGGFSKFQAE 142

>d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 154

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Erk2 binding domain of Mapk phosphatase mkp-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 0.003
 Identities = 21/137 (15%), Positives = 43/137 (31%), Gaps = 32/137 (23%)

Query: 247 TLEQVKRNIEEGT--YQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQT 304
           T+  +   +E G     L+D R +  ++           S H+  +  +  P ++     
Sbjct: 19  TVAWLNEQLELGNERLLLMDCRPQELYE-----------SSHIESAINVAIPGIMLRRLQ 67

Query: 305 --------LLPADELKKRFEQEGISLEKPVVTACGTG-------VTACILALGLNRLGK- 348
                   L    E + RF          VV    +            +L L L +L   
Sbjct: 68  KGNLPVRALFTRGEDRDRF--TRRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDE 125

Query: 349 -HDVAVYDGSWTEWGAQ 364
                  +G ++++ A+
Sbjct: 126 GCRAFYLEGGFSKFQAE 142

>d1e0ca1 c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} Length = 135

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

 Score = 65.9 bits (159), Expect = 8e-14
 Identities = 39/144 (27%), Positives = 55/144 (38%), Gaps = 14/144 (9%)

Query: 64  ADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFF 123
            D+++L +     V+    L A L  P+L ++D +             Y   HIPGA F 
Sbjct: 2   DDFASLPL-----VIEPADLQARLSAPELILVDLTSA---------ARYAEGHIPGARFV 47

Query: 124 DVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGH 183
           D           P + P  E   +    LG   +   VVYD +G   A R  W+  V G 
Sbjct: 48  DPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQ 107

Query: 184 DRVWVLDGGLPRWRASGYDVESSA 207
            R   L+GGL  W A    +    
Sbjct: 108 QRYHYLNGGLTAWLAEDRPLSREL 131

>d1e0ca1 c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} Length = 135

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

 Score = 43.5 bits (101), Expect = 5e-06
 Identities = 25/135 (18%), Positives = 44/135 (32%), Gaps = 18/135 (13%)

Query: 242 PHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA 301
           P +I     ++  +      LVD  S AR+             GH+PG++ +   +    
Sbjct: 8   PLVI-EPADLQARLSAPELILVDLTSAARY-----------AEGHIPGARFVDPKRTQLG 55

Query: 302 SQTLLPADELKKRFEQEG-----ISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDG 356
                     +++ E              VV     G  A      L+ +G+      +G
Sbjct: 56  QPPAPGLQPPREQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNG 115

Query: 357 SWTEWGAQPDTPVET 371
             T W A+ D P+  
Sbjct: 116 GLTAWLAE-DRPLSR 129

>d2gwfa1 c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Human (Homo sapiens) [TaxId: 9606]} Length = 135

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Ubiquitin carboxyl-terminal hydrolase 8, USP8
domain: Ubiquitin carboxyl-terminal hydrolase 8, USP8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 7e-10
 Identities = 15/136 (11%), Positives = 41/136 (30%), Gaps = 25/136 (18%)

Query: 78  VSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 135
           ++   L+  + + ++ ++  DA      +          + I  +L    + ++   T  
Sbjct: 3   ITAKELYTMMTDKNISLIIMDARRMQDYQD---------SCILHSLSVPEEAISPGVT-- 51

Query: 136 PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVF------------GH 183
              + +     +  +     N + +V+ D        ++    R                
Sbjct: 52  ASWIEAHLPDDSKDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLR 111

Query: 184 DRVWVLDGGLPRWRAS 199
           +   VL+GG   W   
Sbjct: 112 NEPLVLEGGYENWLLC 127

>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]} Length = 108

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Sulfurtransferase GlpE
species: Escherichia coli [TaxId: 562]

 Score = 51.7 bits (123), Expect = 4e-09
 Identities = 21/127 (16%), Positives = 36/127 (28%), Gaps = 26/127 (20%)

Query: 247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 306
            +    + ++E    LVD R    F             GH   +  +    +    +   
Sbjct: 8   NVADAHQKLQEKEAVLVDIRDPQSF-----------AMGHAVQAFHLTNDTLGAFMRDND 56

Query: 307 PADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPD 366
                           + PV+  C  G ++   A  L + G   V   DG +  W  Q  
Sbjct: 57  F---------------DTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFP 101

Query: 367 TPVETSS 373
             V   +
Sbjct: 102 AEVAYGA 108

>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]} Length = 108

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Sulfurtransferase GlpE
species: Escherichia coli [TaxId: 562]

 Score = 50.9 bits (121), Expect = 7e-09
 Identities = 23/127 (18%), Positives = 39/127 (30%), Gaps = 30/127 (23%)

Query: 78  VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPH 137
           ++V   H  L+E +  ++D         R+P Q + + H   A     D +     +   
Sbjct: 7   INVADAHQKLQEKEAVLVDI--------RDP-QSFAMGHAVQAFHLTNDTLGAFMRDNDF 57

Query: 138 MLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR 197
             P                     V    G  S           G+D V+ +DGG   W+
Sbjct: 58  DTPVM-------------------VMCYHGNSSK-GAAQYLLQQGYDVVYSIDGGFEAWQ 97

Query: 198 ASGYDVE 204
              +  E
Sbjct: 98  R-QFPAE 103

>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 119

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Thiosulfate sulfurtransferase/Senescence-associated protein
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 50.6 bits (120), Expect = 1e-08
 Identities = 19/130 (14%), Positives = 35/130 (26%), Gaps = 18/130 (13%)

Query: 76  PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 135
             VSV   H  L     + LD         R P +E+   H  GA+            + 
Sbjct: 8   SSVSVTVAHD-LLLAGHRYLDV--------RTP-EEFSQGHACGAINVPYMNRGASGMSK 57

Query: 136 PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR 195
                 +              +   ++   +    + +        G   V  + GG   
Sbjct: 58  NTDFLEQ--------VSSHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSA 109

Query: 196 WRASGYDVES 205
           W  +G   ++
Sbjct: 110 WAKNGLPTKA 119

>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 119

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Thiosulfate sulfurtransferase/Senescence-associated protein
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.3 bits (101), Expect = 4e-06
 Identities = 16/124 (12%), Positives = 35/124 (28%), Gaps = 16/124 (12%)

Query: 247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 306
           ++      +  G ++ +D R+   F             GH  G+  +P+     +  +  
Sbjct: 11  SVTVAHDLLLAG-HRYLDVRTPEEFS-----------QGHACGAINVPYMNRGASGMSKN 58

Query: 307 PADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPD 366
                              ++  C +G  +      L   G   V    G ++ W     
Sbjct: 59  TDF---LEQVSSHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKN-G 114

Query: 367 TPVE 370
            P +
Sbjct: 115 LPTK 118

>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Length = 157

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 49.9 bits (118), Expect = 4e-08
 Identities = 32/189 (16%), Positives = 53/189 (28%), Gaps = 37/189 (19%)

Query: 73  PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           P+   +    L   L EP  +VLD +                  +   L   ++ +    
Sbjct: 2   PRADTIDPTTLADWLGEPGTRVLDFTA--SANYAKRHIPGAAWVLRSQLKQALERLGTAE 59

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGG 192
                                        V        A       +      V++LDGG
Sbjct: 60  R---------------------------YVLTCGSSLLARFAVAEVQALSGKPVFLLDGG 92

Query: 193 LPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVK 252
              W A+G   E   S    L AS   +   + Y+    G    +   Q +L W    V+
Sbjct: 93  TSAWVAAGLPTEDGES----LLASPRIDRYRRPYE----GTDNPREAMQGYLDWEFGLVE 144

Query: 253 RNIEEGTYQ 261
           +   +GT+ 
Sbjct: 145 QLGRDGTHG 153

>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Length = 101

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 47.3 bits (111), Expect = 1e-07
 Identities = 22/125 (17%), Positives = 34/125 (27%), Gaps = 28/125 (22%)

Query: 77  VVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 135
           V +   + A L    +L +LD               +  AH   A    +  +       
Sbjct: 3   VRTFHDIRAALLARRELALLDVREE---------DPFAQAHPLFAANLPLSRLELEIHAR 53

Query: 136 PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR 195
                                +D  +     G   A          G+  V +LDGGL  
Sbjct: 54  VPR------------------RDTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLSG 95

Query: 196 WRASG 200
           WR +G
Sbjct: 96  WRNAG 100

>d1t3ka_ c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 132

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Dual specificity phosphatase Cdc25
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 47.4 bits (111), Expect = 2e-07
 Identities = 17/139 (12%), Positives = 36/139 (25%), Gaps = 16/139 (11%)

Query: 69  LSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGV 128
           ++++     ++   L    R P++ ++D      +   +       A             
Sbjct: 1   MAMARSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQ 60

Query: 129 ADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWV 188
             +  +      +         A  L N                 +       G   + +
Sbjct: 61  NVKDKDTLVFHSALSQVRGPTCARRLVN----------------YLDEKKEDTGIKNIMI 104

Query: 189 LDGGLPRWRASGYDVESSA 207
           L+ G   W ASG  V   A
Sbjct: 105 LERGFNGWEASGKPVCRCA 123

>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Length = 136

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 46.4 bits (109), Expect = 5e-07
 Identities = 23/134 (17%), Positives = 39/134 (29%), Gaps = 27/134 (20%)

Query: 76  PVVSVDWLHANL-REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           P ++ + + A L    +  +LDA        R    EYQ   IPG +      +  R   
Sbjct: 24  PSLAAEEVQALLDARAEAVILDA--------RRF-DEYQTMSIPGGISVPGAELVLRVAE 74

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           L     +                  ++V       S      +      + V  L  G  
Sbjct: 75  LAPDPRTR-----------------VIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGTI 117

Query: 195 RWRASGYDVESSAS 208
            W  +G  +E   +
Sbjct: 118 GWTLAGQQLEHGQT 131

>d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]} Length = 161

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25a
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (82), Expect = 0.003
 Identities = 25/165 (15%), Positives = 46/165 (27%), Gaps = 39/165 (23%)

Query: 50  QSPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREP--DLKVLDASWYMPDEQRN 107
               +  ++A G+  D   +S     P +    L+        +  ++D         R 
Sbjct: 7   SKGYLFHTVA-GKHQDLKYIS-----PEIMASVLNGKFANLIKEFVIIDC--------RY 52

Query: 108 PFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG 167
           P  EY+  HI GA+            NL      E+             +  +V +    
Sbjct: 53  P-YEYEGGHIKGAV------------NLHMEEEVEDFLLKKPIVPTDGKRVIVVFHCEFS 99

Query: 168 IFSAARVWWMFRV----------FGHDRVWVLDGGLPRWRASGYD 202
                R+    R             +  ++VL GG   +      
Sbjct: 100 SERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQS 144

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	373
d1urha1	147	3-mercaptopyruvate sulfurtransferase {Escherichia	100.0
d1e0ca2	136	Sulfurtransferase {Azotobacter vinelandii [TaxId:	99.97
d1rhsa2	144	Rhodanese {Cow (Bos taurus) [TaxId: 9913]}	99.97
d1rhsa1	149	Rhodanese {Cow (Bos taurus) [TaxId: 9913]}	99.97
d1uara2	141	Sulfurtransferase {Thermus thermophilus [TaxId: 27	99.96
d1uara1	143	Sulfurtransferase {Thermus thermophilus [TaxId: 27	99.96
d1okga1	156	3-mercaptopyruvate sulfurtransferase {Leishmania m	99.96
d1urha2	120	3-mercaptopyruvate sulfurtransferase {Escherichia	99.95
d1okga2	139	3-mercaptopyruvate sulfurtransferase {Leishmania m	99.93
d1urha1	147	3-mercaptopyruvate sulfurtransferase {Escherichia	99.93
d1e0ca1	135	Sulfurtransferase {Azotobacter vinelandii [TaxId:	99.93
d1uara1	143	Sulfurtransferase {Thermus thermophilus [TaxId: 27	99.93
d1e0ca2	136	Sulfurtransferase {Azotobacter vinelandii [TaxId:	99.92
d1rhsa1	149	Rhodanese {Cow (Bos taurus) [TaxId: 9913]}	99.9
d1e0ca1	135	Sulfurtransferase {Azotobacter vinelandii [TaxId:	99.88
d1rhsa2	144	Rhodanese {Cow (Bos taurus) [TaxId: 9913]}	99.88
d1okga1	156	3-mercaptopyruvate sulfurtransferase {Leishmania m	99.88
d1tq1a_	119	Thiosulfate sulfurtransferase/Senescence-associate	99.87
d1yt8a1	136	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.87
d1yt8a1	136	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.87
d1uara2	141	Sulfurtransferase {Thermus thermophilus [TaxId: 27	99.86
d1gmxa_	108	Sulfurtransferase GlpE {Escherichia coli [TaxId: 5	99.86
d1tq1a_	119	Thiosulfate sulfurtransferase/Senescence-associate	99.84
d1yt8a2	101	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.84
d1yt8a3	157	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.83
d1yt8a2	101	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.83
d1yt8a3	157	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.83
d1urha2	120	3-mercaptopyruvate sulfurtransferase {Escherichia	99.83
d1gmxa_	108	Sulfurtransferase GlpE {Escherichia coli [TaxId: 5	99.83
d1qxna_	137	Polysulfide-sulfur transferase (sulfide dehydrogen	99.83
d1qxna_	137	Polysulfide-sulfur transferase (sulfide dehydrogen	99.82
d1t3ka_	132	Dual specificity phosphatase Cdc25 {Thale cress (A	99.81
d1yt8a4	130	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.79
d1okga2	139	3-mercaptopyruvate sulfurtransferase {Leishmania m	99.78
d1yt8a4	130	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.77
d1t3ka_	132	Dual specificity phosphatase Cdc25 {Thale cress (A	99.77
d2gwfa1	135	Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Hum	99.65
d1c25a_	161	CDC25a {Human (Homo sapiens) [TaxId: 9606]}	99.63
d1hzma_	154	Erk2 binding domain of Mapk phosphatase mkp-3 {Hum	99.63
d1c25a_	161	CDC25a {Human (Homo sapiens) [TaxId: 9606]}	99.6
d1ymka1	174	CDC25b {Human (Homo sapiens) [TaxId: 9606]}	99.58
d2gwfa1	135	Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Hum	99.55
d1ymka1	174	CDC25b {Human (Homo sapiens) [TaxId: 9606]}	99.54
d1hzma_	154	Erk2 binding domain of Mapk phosphatase mkp-3 {Hum	99.52
d1xria_	151	Putative phosphatase At1g05000 {Thale cress (Arabi	86.55
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	83.76
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	82.57

>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-32  Score=232.65  Aligned_cols=134  Identities=43%  Similarity=0.857  Sum_probs=122.7

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCC-CCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           75 EPVVSVDWLHANLREPDLKVLDASWYMPDE-QRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~-~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      ..+||++||.++|++++++|||+|++++.. .++..++|..||||||+|+++..+.+.....++++|++++|++.++.+|
T Consensus         2 ~~lVs~~wL~~~L~~~~v~iiD~r~~~~~~~~~~~~~~y~~gHIPGAi~~~~~~~~~~~~~~~~~~p~~~~~~~~l~~~G   81 (147)
T d1urha1           2 TWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELG   81 (147)
T ss_dssp             CCEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTT
T ss_pred             CccCcHHHHHHHhCCCCeEEEEeeCCCCCccCccHHHHHHhCCccccEEeehhhhccccccccccCCCHHHHHHHHHHhC
Confidence            468999999999999999999999876533 3455578999999999999999988888888999999999999999999


Q ss_pred             CCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCC
Q 017338          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (373)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~  208 (373)
                      |+++++||+||+.+...|+|++|+|+.+||++|++||||+.+|+++|+|++++.+
T Consensus        82 i~~~~~vVvY~~~~~~~A~r~~~~L~~~G~~~V~vLdGG~~~W~~~g~pv~~~~~  136 (147)
T d1urha1          82 VNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAV  136 (147)
T ss_dssp             CCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCC
T ss_pred             cCCCCeEEEEeCCCcccchhHHHHHHhhcccceEEeCChHHHHHHcCCCccCCCC
Confidence            9999999999987777799999999999999999999999999999999999864

>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.97  E-value=2.5e-32  Score=227.44  Aligned_cols=128  Identities=30%  Similarity=0.519  Sum_probs=118.0

Q ss_pred             cCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcC
Q 017338          240 FQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEG  319 (373)
Q Consensus       240 ~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~g  319 (373)
                      +++..++|.++|++++++++++|||+|++.||.|+....   .+.||||||+|+||.++.+..+.|++.++|++.|.+.|
T Consensus         8 ~~~~~~~s~d~l~~~l~~~~~~liD~R~~~ey~G~~~~~---~~~GhIPGAinip~~~~~~~~~~~~~~~~l~~~~~~~g   84 (136)
T d1e0ca2           8 LHDEPTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLA---AKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELG   84 (136)
T ss_dssp             CCSTTBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCS---SSCSBCTTCEECCGGGGEEGGGTTEECTTHHHHHHHTT
T ss_pred             cCCCceEcHHHHHHhhCCCCeEEEECcChHHhccccccc---ccCCcchhHhhhhhhhhhccccccchhHHHhhhhhhcc
Confidence            456678999999999999999999999999999875433   26899999999999999888888999999999999999


Q ss_pred             CCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCc
Q 017338          320 ISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE  370 (373)
Q Consensus       320 i~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~  370 (373)
                      ++++++||+||++|.+|+.++++|+.+||+||++|+|||.+|.+.+++|||
T Consensus        85 i~~~~~vV~yC~~G~~a~~~~~~l~~~G~~~v~~ydGg~~eW~~~~~~PvE  135 (136)
T d1e0ca2          85 ITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE  135 (136)
T ss_dssp             CCTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCB
T ss_pred             cCCCCceEEeCCChHHHHHHHHHHHHcCCCCcEEecCCHHHHhcCCCCCCc
Confidence            999999999999999999999999999999999999999999887799997

>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=2.3e-32  Score=229.70  Aligned_cols=139  Identities=41%  Similarity=0.726  Sum_probs=126.5

Q ss_pred             ceeeccCCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCC-CCCcccCCCCcccCcccccccCCCCCCHHHHHH
Q 017338          235 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPADELKK  313 (373)
Q Consensus       235 ~~~~~~~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~-~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~  313 (373)
                      .|.+.+++.++++.+|+++++++++++|||+|+++||.|+...+.. +.+.||||||+|+|+..+.+..+.+++++++++
T Consensus         2 ~f~~~~~~~~i~~~~ev~~~l~~~~~~iiD~R~~~ef~G~~~~~~~~~~~~GhIpgA~~ip~~~~~~~~~~~~~~~~l~~   81 (144)
T d1rhsa2           2 IFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRA   81 (144)
T ss_dssp             CCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCBCCHHHHHH
T ss_pred             eeecccChHHeecHHHHHHHhcCCCcEEEECCCCHHHcCCCCCCccccceeeehhhhhhcchhhhhhhhcccCCHHHHHH
Confidence            5777889999999999999999999999999999999997765532 357899999999999999988889999999999


Q ss_pred             HHHHcCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcC--CCCCCcCCC
Q 017338          314 RFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ--PDTPVETSS  373 (373)
Q Consensus       314 ~~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~--~g~Pv~~~~  373 (373)
                      ++.+.|++++++||+||++|.||+.++++|+.+||++|++|||||.+|..+  +..||++|.
T Consensus        82 ~~~~~gi~~~~~iI~yC~sG~~A~~~~~~l~~lG~~~v~~YdGsw~eW~~~~~p~~pV~~G~  143 (144)
T d1rhsa2          82 MFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQGK  143 (144)
T ss_dssp             HHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEBTTB
T ss_pred             HHHHcCCCCCCCEEEEecccchHHHHHHHHHHcCCCCCEEeCCCHHHHhhcCCCCCCcCCCC
Confidence            999999999999999999999999999999999999999999999999865  247888873

>d1rhsa1 c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=3.5e-31  Score=223.79  Aligned_cols=135  Identities=49%  Similarity=0.903  Sum_probs=122.4

Q ss_pred             CCCCcccHHHHHHhcC----CCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHH
Q 017338           73 PKEPVVSVDWLHANLR----EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA  148 (373)
Q Consensus        73 ~~~~~is~~~l~~~l~----~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~  148 (373)
                      +..++||++||.++|+    +++++|||||+++++. |++.++|..||||||+|++++.+........+++|+.+.|++.
T Consensus         5 ~~~~lVs~~wL~~~L~~~~~~~~~~IiD~r~~~~~~-~~~~~~y~~gHIPGAv~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (149)
T d1rhsa1           5 LYRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGT-REARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADY   83 (149)
T ss_dssp             CCCSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTS-CCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHH
T ss_pred             cCCCccCHHHHHHHHhccCCCCCEEEEEecCcCCCC-cchHHHHHHhcccCceeccHHhhcccccchhhhhhhhHHHHHH
Confidence            4568999999999986    3579999999988774 6778899999999999999999888888888999999999999


Q ss_pred             HHHcCCCCCCeEEEEcCC--CCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCC
Q 017338          149 VSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (373)
Q Consensus       149 l~~~gi~~~~~VVvy~~~--g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~  208 (373)
                      |+.+|++++++||+||+.  ++..++|+||+|+++||++|++||||+.+|+++|+|+++.++
T Consensus        84 l~~~Gi~~~~~vVvy~~~~~~~~~a~r~~w~L~~~G~~~V~vLdGG~~~W~~~G~pv~~~~~  145 (149)
T d1rhsa1          84 VGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPS  145 (149)
T ss_dssp             HHHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSCC
T ss_pred             HhhhhccCCceeEEeeccCCcchhhhHHHHHHHHcCCCceEEeCCcHHHHHHCcCcccCCCC
Confidence            999999999999999864  455699999999999999999999999999999999998764

>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=4.3e-30  Score=214.82  Aligned_cols=127  Identities=33%  Similarity=0.597  Sum_probs=110.2

Q ss_pred             CHHHHHHHh---hCCCcEEEEecCCCccCCCCCCC-----CCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHc
Q 017338          247 TLEQVKRNI---EEGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQE  318 (373)
Q Consensus       247 s~~el~~~~---~~~~~~iIDvR~~~e~~G~~~~~-----~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~  318 (373)
                      ..+++.+.+   ++++.+|||+|+++||.|+.+..     ....+.||||||+|+||.++.+.++.+++++++++++...
T Consensus         5 ~~~~v~~~~~~~~~~~~~lvD~R~~~ey~G~~~~~~~~~~~~~~r~GhIpgA~nlp~~~~~~~~~~~~~~~~~~~~~~~~   84 (141)
T d1uara2           5 YRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALYEPL   84 (141)
T ss_dssp             CHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHGGG
T ss_pred             cHHHHHHHHHHhhCCCcEEEeCCCHHHcCCccCcccccCcccceeeeEeCCccccccccccccccccccHHHHHHHHHHh
Confidence            445555444   46789999999999999976542     2234689999999999999998888999999999999999


Q ss_pred             CCCCCCcEEEEcCCchHHHHHHHHHHH-cCCCCceeecccHHHHhcCCCCCCcCCC
Q 017338          319 GISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWGAQPDTPVETSS  373 (373)
Q Consensus       319 gi~~~~~IvvyC~~G~ra~~a~~~L~~-~G~~~v~~~~GG~~~W~~~~g~Pv~~~~  373 (373)
                      |++++++||+||++|.+|+.++++|+. +||+||++|||||.+|.+.+++||++|+
T Consensus        85 gi~~d~~vV~yC~~G~~As~~~~~l~~~~G~~~v~~ydGs~~eW~~~~~~Pv~~g~  140 (141)
T d1uara2          85 GITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKGE  140 (141)
T ss_dssp             TCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCSC
T ss_pred             CCCCCCeEEEEecCcchHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCC
Confidence            999999999999999999999999986 8999999999999999886699999985

>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=6.6e-30  Score=214.49  Aligned_cols=127  Identities=30%  Similarity=0.564  Sum_probs=113.6

Q ss_pred             CCCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHH
Q 017338           72 SPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (373)
Q Consensus        72 ~~~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~  151 (373)
                      +++..+||++||++++.+++++|||||        ++.++|..||||||+|+|+....  ..+..+++++.+.|++.++.
T Consensus         3 ~~p~~lVs~~~l~~~l~~~~v~iiDvr--------~~~~~y~~gHIPgAi~~~~~~~~--~~~~~~~l~~~~~l~~~~~~   72 (143)
T d1uara1           3 AHPEVLVSTDWVQEHLEDPKVRVLEVD--------EDILLYDTGHIPGAQKIDWQRDF--WDPVVRDFISEEEFAKLMER   72 (143)
T ss_dssp             SCGGGEECHHHHHTTTTCTTEEEEEEC--------SSTTHHHHCBCTTCEEECHHHHH--BCSSSSSBCCHHHHHHHHHH
T ss_pred             CCCCccCcHHHHHHHhCCCCeEEEECC--------CCHHHHhcCCCCCcccccccccc--cccccccchhhHHHHHHhhh
Confidence            355679999999999999999999996        34578999999999999986532  23466889999999999999


Q ss_pred             cCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCC
Q 017338          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (373)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~  208 (373)
                      +||+++++||+||+.+...|+|++|+|+.+||++|++|+||+.+|+.+|+|+++..+
T Consensus        73 ~Gi~~~~~iVvy~~~~~~~a~~~~~~l~~~G~~~V~vldGG~~~W~~~g~p~~~~~~  129 (143)
T d1uara1          73 LGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEVP  129 (143)
T ss_dssp             TTCCTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCCC
T ss_pred             hccCCCceEEEecCCCcccchhHHHHHHHhCCceEEEEcCcHHHHHHCCCCccCCCC
Confidence            999999999999987777899999999999999999999999999999999998764

>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

Probab=99.96  E-value=2.5e-29  Score=212.78  Aligned_cols=130  Identities=23%  Similarity=0.475  Sum_probs=112.8

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccc-cc--cCCCCCCCCCCHHHHHHHHHH
Q 017338           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGV-AD--RTTNLPHMLPSEEAFAAAVSA  151 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l-~~--~~~~~~~~l~~~e~~~~~l~~  151 (373)
                      ..+||++||.+++.  +++||||||++.+... ..++|..||||||++++++.. ..  ....+++|||++++|++.|+.
T Consensus         7 ~~lvs~~~L~~~l~--d~~iiD~r~~l~~~~~-g~~~Y~~gHIPGA~~~d~~~~l~~~~~~~~~~~~lP~~~~~~~~l~~   83 (156)
T d1okga1           7 KVFLDPSEVADHLA--EYRIVDCRYSLKIKDH-GSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPCAEFIDWCMA   83 (156)
T ss_dssp             CCEECHHHHTTCGG--GSEEEECCCCSSSTTT-TTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHH
T ss_pred             CcEeCHHHHHHhcC--CCEEEEeeccCCCCcc-hHHHHHHcCCCCCeEcCHHHhcccccCCCCCccccCCHHHHHHHHHh
Confidence            45899999999886  4999999998877654 357899999999999998753 22  244577899999999999999


Q ss_pred             cCCCCCCeEEEEcCC-CCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCC
Q 017338          152 LGLENKDGLVVYDGK-GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (373)
Q Consensus       152 ~gi~~~~~VVvy~~~-g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~  208 (373)
                      +||+++++||+||+. |...|+|+||+|+++|+ +|++||||+.+|+++|+|++++.+
T Consensus        84 lGI~~~~~VVvYd~~~g~~~A~R~~w~L~~~G~-~v~iLdGG~~aW~~~G~pv~t~~p  140 (156)
T d1okga1          84 NGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESGEP  140 (156)
T ss_dssp             TTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECSCC
T ss_pred             ccccCCceEEEEeCCCCchHHHHHHHHHHHcCC-eeEEeCCCHHHHHHCCCCCCCCCC
Confidence            999999999999864 45679999999999998 799999999999999999998864

>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=2.4e-28  Score=198.65  Aligned_cols=120  Identities=38%  Similarity=0.789  Sum_probs=107.0

Q ss_pred             CCccccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCC
Q 017338          241 QPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI  320 (373)
Q Consensus       241 ~~~~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi  320 (373)
                      +|+.+++.+|+..+.++++.+|||+|++++|.|...++......||||||+|+|+..+.. ...+++.+++++.+...++
T Consensus         1 np~~~~~~~ev~~~~~~~~~~liD~R~~~~f~G~~~~~~~~~~~G~Ipga~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~   79 (120)
T d1urha2           1 NPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR-EGELKTTDELDAIFFGRGV   79 (120)
T ss_dssp             CGGGBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBS-SSSBCCHHHHHHHHHTTTC
T ss_pred             ChhHHccHHHHHHHhhCCCcEEEeCCCHHHcCcccCCcccccccccccccchhchhhccc-ccccCCHHHhhhhhhhccc
Confidence            356788999999999989999999999999999888777777899999999999987655 4678999999999999999


Q ss_pred             CCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHH
Q 017338          321 SLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW  361 (373)
Q Consensus       321 ~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W  361 (373)
                      +++++||+||++|.||+.++++|+.+||+||++|+|||.+|
T Consensus        80 ~~~~~ii~yC~sG~~A~~~~~~L~~lG~~~v~~y~Gs~~eW  120 (120)
T d1urha2          80 SYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEW  120 (120)
T ss_dssp             CSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC-
T ss_pred             CccCceEEEccchhHHHHHHHHHHHcCCCCceEcCCChhhC
Confidence            99999999999999999999999999999999999999999

>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

Probab=99.93  E-value=1.2e-27  Score=199.59  Aligned_cols=116  Identities=27%  Similarity=0.447  Sum_probs=100.3

Q ss_pred             CCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccC---CCCCCHHHHHHHHHHc-----CCCCCCcEEE
Q 017338          257 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS---QTLLPADELKKRFEQE-----GISLEKPVVT  328 (373)
Q Consensus       257 ~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~---~~~~~~~~l~~~~~~~-----gi~~~~~Ivv  328 (373)
                      .++.+|||+|+++||.|+...+....+.||||||+|+|+..+....   ..+++.+++++.+.+.     +++++++||+
T Consensus        10 ~p~~vlvD~R~~~ef~G~~~~~~~~~~~GHIpgAvnip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vV~   89 (139)
T d1okga2          10 PPQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVF   89 (139)
T ss_dssp             CTTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTSEE
T ss_pred             CCCeEEEeCCCHHHhCCcCCCcccCCcCceeCCCeeccchhhccccccccccCCHHHhhhhhhhhhhhccCCCCCCeEEE
Confidence            3578999999999999988777666789999999999998876543   3578999999998754     6788899999


Q ss_pred             EcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          329 ACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       329 yC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      ||++|.+|+.++++|+.+||+||++|||||.+|.+..++||+++
T Consensus        90 yC~sG~~Aa~~~~~L~~~G~~~v~vydGsw~eW~~~~~~Pv~~~  133 (139)
T d1okga2          90 SCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRS  133 (139)
T ss_dssp             ECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHhCCCCccCCCCCHHHHhCCCCCCeeec
Confidence            99999999999999999999999999999999987658999864

>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=8.4e-27  Score=196.26  Aligned_cols=128  Identities=17%  Similarity=0.271  Sum_probs=105.8

Q ss_pred             cccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccC----CCCCCHHHHHHHHHHcC
Q 017338          244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLPADELKKRFEQEG  319 (373)
Q Consensus       244 ~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~----~~~~~~~~l~~~~~~~g  319 (373)
                      .+||+++|.+++++++++|||+|....+.+. ......+..||||||+|+++..+.+..    +.+++.+++++.++++|
T Consensus         3 ~lVs~~wL~~~L~~~~v~iiD~r~~~~~~~~-~~~~~~y~~gHIPGAi~~~~~~~~~~~~~~~~~~p~~~~~~~~l~~~G   81 (147)
T d1urha1           3 WFVGADWLAEHIDDPEIQIIDARMASPGQED-RNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELG   81 (147)
T ss_dssp             CEECHHHHHTTTTCTTEEEEECCCCCSSCTT-CCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTT
T ss_pred             ccCcHHHHHHHhCCCCeEEEEeeCCCCCccC-ccHHHHHHhCCccccEEeehhhhccccccccccCCCHHHHHHHHHHhC
Confidence            4789999999999999999999953221100 000011268999999999998876654    35779999999999999


Q ss_pred             CCCCCcEEEEcCC-chHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCCC
Q 017338          320 ISLEKPVVTACGT-GVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETSS  373 (373)
Q Consensus       320 i~~~~~IvvyC~~-G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~~  373 (373)
                      |+++++||+||.+ +..|++++|+|+.+||+||++|||||.+|.++ |+|++++.
T Consensus        82 i~~~~~vVvY~~~~~~~A~r~~~~L~~~G~~~V~vLdGG~~~W~~~-g~pv~~~~  135 (147)
T d1urha1          82 VNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRD-DLLLEEGA  135 (147)
T ss_dssp             CCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHT-TCCCBBSC
T ss_pred             cCCCCeEEEEeCCCcccchhHHHHHHhhcccceEEeCChHHHHHHc-CCCccCCC
Confidence            9999999999965 56789999999999999999999999999998 99999873

>d1e0ca1 c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.93  E-value=9.6e-26  Score=186.48  Aligned_cols=126  Identities=29%  Similarity=0.465  Sum_probs=114.3

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      ...+||++||++++.+++++|||||         +.++|..||||||+|+|+..+...........+..+.++..+...+
T Consensus         7 ~p~lIs~~el~~~l~~~~~viiDvR---------~~~ey~~gHIpgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (135)
T d1e0ca1           7 LPLVIEPADLQARLSAPELILVDLT---------SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELG   77 (135)
T ss_dssp             SCSEECHHHHHTTTTCTTEEEEECS---------CHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHT
T ss_pred             CCcEeeHHHHHHHhcCCCeEEEECC---------CHHHHhcccCccccccchhhhhhcccccchhhcchhhhhhhhcccc
Confidence            3568999999999999999999996         5689999999999999999887666666777788888999999999


Q ss_pred             CCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCC
Q 017338          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (373)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~  208 (373)
                      +.....+|+||+.++..+++++|.|+.+||+||++|+||+.+|+++|+|+++..+
T Consensus        78 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~G~~~V~~l~GG~~~W~~~g~p~~~~~p  132 (135)
T d1e0ca1          78 HRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELP  132 (135)
T ss_dssp             CCTTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCC
T ss_pred             ccccccccccccccCccchhhHHHHHhccCCCEEEecChHHHHHHCCCCCCCCCC
Confidence            9999999999988888899999999999999999999999999999999998764

>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=1e-26  Score=194.82  Aligned_cols=120  Identities=20%  Similarity=0.370  Sum_probs=106.8

Q ss_pred             CCccccCHHHHHHHhhCCCcEEEEecC-CCccCCCCCCCCCCCCcccCCCCcccCccccccc--CCCCCCHHHHHHHHHH
Q 017338          241 QPHLIWTLEQVKRNIEEGTYQLVDARS-KARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA--SQTLLPADELKKRFEQ  317 (373)
Q Consensus       241 ~~~~~is~~el~~~~~~~~~~iIDvR~-~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~--~~~~~~~~~l~~~~~~  317 (373)
                      +++.+||++||++++++++++|||+|+ .++|           ..||||||+|+|+......  .+++++.++|++++.+
T Consensus         4 ~p~~lVs~~~l~~~l~~~~v~iiDvr~~~~~y-----------~~gHIPgAi~~~~~~~~~~~~~~~l~~~~~l~~~~~~   72 (143)
T d1uara1           4 HPEVLVSTDWVQEHLEDPKVRVLEVDEDILLY-----------DTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMER   72 (143)
T ss_dssp             CGGGEECHHHHHTTTTCTTEEEEEECSSTTHH-----------HHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHH
T ss_pred             CCCccCcHHHHHHHhCCCCeEEEECCCCHHHH-----------hcCCCCCcccccccccccccccccchhhHHHHHHhhh
Confidence            456789999999999988999999995 6778           8999999999998765433  2467899999999999


Q ss_pred             cCCCCCCcEEEEcCCch-HHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          318 EGISLEKPVVTACGTGV-TACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       318 ~gi~~~~~IvvyC~~G~-ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +|++++++||+||.+|. +|+++++.|+.+||++|++|+|||.+|..+ |+|++++
T Consensus        73 ~Gi~~~~~iVvy~~~~~~~a~~~~~~l~~~G~~~V~vldGG~~~W~~~-g~p~~~~  127 (143)
T d1uara1          73 LGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEE-GRPLTTE  127 (143)
T ss_dssp             TTCCTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHH-TCCCBCC
T ss_pred             hccCCCceEEEecCCCcccchhHHHHHHHhCCceEEEEcCcHHHHHHC-CCCccCC
Confidence            99999999999997765 678899999999999999999999999999 9999986

>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.92  E-value=2.3e-25  Score=184.83  Aligned_cols=118  Identities=27%  Similarity=0.400  Sum_probs=102.7

Q ss_pred             CCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhh--------hCCCcCceecCcccccccCCCCCCCCCCHHH
Q 017338           73 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ--------VAHIPGALFFDVDGVADRTTNLPHMLPSEEA  144 (373)
Q Consensus        73 ~~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~--------~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~  144 (373)
                      +..+++|.+||.+++.+++++|||+|         +..+|.        .||||||+|+|+..+.+..    +.+.++++
T Consensus         9 ~~~~~~s~d~l~~~l~~~~~~liD~R---------~~~ey~G~~~~~~~~GhIPGAinip~~~~~~~~----~~~~~~~~   75 (136)
T d1e0ca2           9 HDEPTASRDYLLGRLGAADLAIWDAR---------SPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPS----RALRIRTD   75 (136)
T ss_dssp             CSTTBCCHHHHHHHTTCTTEEEEECS---------CHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGG----GTTEECTT
T ss_pred             CCCceEcHHHHHHhhCCCCeEEEECc---------ChHHhcccccccccCCcchhHhhhhhhhhhccc----cccchhHH
Confidence            45678999999999999999999996         457885        7999999999998876532    34556678


Q ss_pred             HHHHHHHcCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHh-CCCCcc
Q 017338          145 FAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGYDVE  204 (373)
Q Consensus       145 ~~~~l~~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~-~g~pv~  204 (373)
                      |++.++.+|++++++||+||+.|. +|++++|+|+.+||+||++|+|||.+|.+ .++||+
T Consensus        76 l~~~~~~~gi~~~~~vV~yC~~G~-~a~~~~~~l~~~G~~~v~~ydGg~~eW~~~~~~PvE  135 (136)
T d1e0ca2          76 IAGRLEELGITPDKEIVTHCQTHH-RSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE  135 (136)
T ss_dssp             HHHHHHHTTCCTTSEEEEECSSSS-HHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCB
T ss_pred             HhhhhhhcccCCCCceEEeCCChH-HHHHHHHHHHHcCCCCcEEecCCHHHHhcCCCCCCc
Confidence            999999999999999999999776 49999999999999999999999999966 488876

>d1rhsa1 c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.90  E-value=1.4e-24  Score=182.89  Aligned_cols=118  Identities=19%  Similarity=0.292  Sum_probs=103.5

Q ss_pred             cccCHHHHHHHhh----CCCcEEEEecC--------CCccCCCCCCCCCCCCcccCCCCcccCcccccccC----CCCCC
Q 017338          244 LIWTLEQVKRNIE----EGTYQLVDARS--------KARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLP  307 (373)
Q Consensus       244 ~~is~~el~~~~~----~~~~~iIDvR~--------~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~----~~~~~  307 (373)
                      .+||++||.++++    +++++|||+|.        .++|           ..||||||+|++++.+....    ..+.+
T Consensus         8 ~lVs~~wL~~~L~~~~~~~~~~IiD~r~~~~~~~~~~~~y-----------~~gHIPGAv~~~~~~~~~~~~~~~~~~~~   76 (149)
T d1rhsa1           8 ALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEY-----------LERHVPGASFFDIEECRDKASPYEVMLPS   76 (149)
T ss_dssp             SEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHH-----------HHSBCTTCEECCTTTSSCTTSSSSSCCCC
T ss_pred             CccCHHHHHHHHhccCCCCCEEEEEecCcCCCCcchHHHH-----------HHhcccCceeccHHhhcccccchhhhhhh
Confidence            4789999999997    34789999993        3456           78999999999998876543    45788


Q ss_pred             HHHHHHHHHHcCCCCCCcEEEEcCC---chHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCCC
Q 017338          308 ADELKKRFEQEGISLEKPVVTACGT---GVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETSS  373 (373)
Q Consensus       308 ~~~l~~~~~~~gi~~~~~IvvyC~~---G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~~  373 (373)
                      .+++.+.|.+.|++++++||+||+.   +..|++++|.|+.+||+||++||||+.+|.++ |+||++++
T Consensus        77 ~~~~~~~l~~~Gi~~~~~vVvy~~~~~~~~~a~r~~w~L~~~G~~~V~vLdGG~~~W~~~-G~pv~~~~  144 (149)
T d1rhsa1          77 EAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKE-GHPVTSEP  144 (149)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHT-TCCCBCSC
T ss_pred             hHHHHHHHhhhhccCCceeEEeeccCCcchhhhHHHHHHHHcCCCceEEeCCcHHHHHHC-cCcccCCC
Confidence            9999999999999999999999964   56789999999999999999999999999999 99999864

>d1e0ca1 c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.88  E-value=3.6e-23  Score=170.80  Aligned_cols=117  Identities=23%  Similarity=0.332  Sum_probs=102.6

Q ss_pred             cccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccC----CCCCCHHHHHHHHHHcC
Q 017338          244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLPADELKKRFEQEG  319 (373)
Q Consensus       244 ~~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~----~~~~~~~~l~~~~~~~g  319 (373)
                      ++|+++||++++++++++|||+|++++|           ..||||||+|+|+..+....    ......+.++..+...+
T Consensus         9 ~lIs~~el~~~l~~~~~viiDvR~~~ey-----------~~gHIpgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (135)
T d1e0ca1           9 LVIEPADLQARLSAPELILVDLTSAARY-----------AEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELG   77 (135)
T ss_dssp             SEECHHHHHTTTTCTTEEEEECSCHHHH-----------HHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHT
T ss_pred             cEeeHHHHHHHhcCCCeEEEECCCHHHH-----------hcccCccccccchhhhhhcccccchhhcchhhhhhhhcccc
Confidence            5789999999999889999999999999           89999999999998876543    23456777778887788


Q ss_pred             CCCCCcEEEEcC-CchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          320 ISLEKPVVTACG-TGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       320 i~~~~~IvvyC~-~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      ...+..+|+||. +|.+++.+++.|+.+||+||++|+|||.+|.++ |+|++++
T Consensus        78 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~G~~~V~~l~GG~~~W~~~-g~p~~~~  130 (135)
T d1e0ca1          78 HRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAE-DRPLSRE  130 (135)
T ss_dssp             CCTTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHT-TCCCBCC
T ss_pred             ccccccccccccccCccchhhHHHHHhccCCCEEEecChHHHHHHC-CCCCCCC
Confidence            888888888875 567888999999999999999999999999998 9999986

>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.88  E-value=5.2e-23  Score=172.08  Aligned_cols=116  Identities=17%  Similarity=0.218  Sum_probs=102.2

Q ss_pred             CCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhh------------hCCCcCceecCcccccccCCCCCCCCC
Q 017338           73 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ------------VAHIPGALFFDVDGVADRTTNLPHMLP  140 (373)
Q Consensus        73 ~~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~------------~gHIpGAi~ip~~~l~~~~~~~~~~l~  140 (373)
                      ++..++|.+|+.+++++++++|||+|         +.++|.            .||||||+|+|+..+.+..    ..+.
T Consensus         8 ~~~~i~~~~ev~~~l~~~~~~iiD~R---------~~~ef~G~~~~~~~~~~~~GhIpgA~~ip~~~~~~~~----~~~~   74 (144)
T d1rhsa2           8 NRSLLKTYEQVLENLESKRFQLVDSR---------AQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTED----GFEK   74 (144)
T ss_dssp             CGGGEECHHHHHHHHHHCCSEEEECS---------CHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTT----SCBC
T ss_pred             ChHHeecHHHHHHHhcCCCcEEEECC---------CCHHHcCCCCCCccccceeeehhhhhhcchhhhhhhh----cccC
Confidence            45678999999999999899999997         457885            7999999999999876532    4678


Q ss_pred             CHHHHHHHHHHcCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCC
Q 017338          141 SEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD  202 (373)
Q Consensus       141 ~~e~~~~~l~~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~p  202 (373)
                      +++++++.+...|++++++||+||+.|.+ |+.++++|+.+||++|++|+|||..|...+.|
T Consensus        75 ~~~~l~~~~~~~gi~~~~~iI~yC~sG~~-A~~~~~~l~~lG~~~v~~YdGsw~eW~~~~~p  135 (144)
T d1rhsa2          75 SPEELRAMFEAKKVDLTKPLIATCRKGVT-ACHIALAAYLCGKPDVAIYDGSWFEWFHRAPP  135 (144)
T ss_dssp             CHHHHHHHHHHTTCCTTSCEEEECSSSST-HHHHHHHHHHTTCCCCEEESSHHHHHHHHSCG
T ss_pred             CHHHHHHHHHHcCCCCCCCEEEEecccch-HHHHHHHHHHcCCCCCEEeCCCHHHHhhcCCC
Confidence            89999999999999999999999997765 99999999999999999999999999876643

>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

Probab=99.88  E-value=4.5e-23  Score=174.02  Aligned_cols=115  Identities=23%  Similarity=0.350  Sum_probs=98.5

Q ss_pred             ccccCHHHHHHHhhCCCcEEEEecC--------CCccCCCCCCCCCCCCcccCCCCcccCcccccccC-------CCCCC
Q 017338          243 HLIWTLEQVKRNIEEGTYQLVDARS--------KARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS-------QTLLP  307 (373)
Q Consensus       243 ~~~is~~el~~~~~~~~~~iIDvR~--------~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~-------~~~~~  307 (373)
                      ..+|+++||.++++  +++|||+|.        ..+|           ..||||||++++++......       .++++
T Consensus         7 ~~lvs~~~L~~~l~--d~~iiD~r~~l~~~~~g~~~Y-----------~~gHIPGA~~~d~~~~l~~~~~~~~~~~~lP~   73 (156)
T d1okga1           7 KVFLDPSEVADHLA--EYRIVDCRYSLKIKDHGSIQY-----------AKEHVKSAIRADVDTNLSKLVPTSTARHPLPP   73 (156)
T ss_dssp             CCEECHHHHTTCGG--GSEEEECCCCSSSTTTTTTHH-----------HHCEETTCEECCTTTTSCCCCTTCCCSSCCCC
T ss_pred             CcEeCHHHHHHhcC--CCEEEEeeccCCCCcchHHHH-----------HHcCCCCCeEcCHHHhcccccCCCCCccccCC
Confidence            45899999999886  489999993        4556           78999999999987644321       24778


Q ss_pred             HHHHHHHHHHcCCCCCCcEEEEcCC-c-hHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          308 ADELKKRFEQEGISLEKPVVTACGT-G-VTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       308 ~~~l~~~~~~~gi~~~~~IvvyC~~-G-~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      .++|++.+.++||+++++||+||+. | ..|++++|.|+.+|+ ||++||||+.+|.++ |+|++++
T Consensus        74 ~~~~~~~l~~lGI~~~~~VVvYd~~~g~~~A~R~~w~L~~~G~-~v~iLdGG~~aW~~~-G~pv~t~  138 (156)
T d1okga1          74 CAEFIDWCMANGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAA-GLEMESG  138 (156)
T ss_dssp             HHHHHHHHHHTTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTT-TCCEECS
T ss_pred             HHHHHHHHHhccccCCceEEEEeCCCCchHHHHHHHHHHHcCC-eeEEeCCCHHHHHHC-CCCCCCC
Confidence            9999999999999999999999854 4 578999999999996 799999999999999 9999876

>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Thiosulfate sulfurtransferase/Senescence-associated protein
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.87  E-value=3.3e-23  Score=167.81  Aligned_cols=111  Identities=15%  Similarity=0.256  Sum_probs=90.9

Q ss_pred             ccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCC
Q 017338          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (373)
Q Consensus       245 ~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~  324 (373)
                      .++.+++.++++. +.+|||+|++.||           ..||||||+|+|+..+.... .....+.+++...  .+++++
T Consensus         9 ~i~~~~a~~l~~~-g~~liDvR~~~e~-----------~~ghi~ga~~ip~~~~~~~~-~~~~~~~~~~~~~--~~~~~~   73 (119)
T d1tq1a_           9 SVSVTVAHDLLLA-GHRYLDVRTPEEF-----------SQGHACGAINVPYMNRGASG-MSKNTDFLEQVSS--HFGQSD   73 (119)
T ss_dssp             EEEHHHHHHHHHH-TCCEEEESCHHHH-----------HHCCBTTBEECCSCCCSTTT-CCCTTTHHHHHTT--TCCTTS
T ss_pred             ccCHHHHHHHHHC-cCEEEECCCHHHH-----------HcCCCCCccchhhccccccc-ccccHHHHHHHHH--hcCCCc
Confidence            3566777777654 5789999999999           89999999999987754332 2234455555544  578999


Q ss_pred             cEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcC
Q 017338          325 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  371 (373)
Q Consensus       325 ~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~  371 (373)
                      +||+||++|.||..++..|..+||+||++|+|||.+|.++ |+|+|.
T Consensus        74 ~iv~~C~~G~rs~~a~~~L~~~G~~nv~~l~GG~~~W~~~-g~P~ea  119 (119)
T d1tq1a_          74 NIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKN-GLPTKA  119 (119)
T ss_dssp             SEEEEESSCSHHHHHHHHHHHHHCCSEEEEECCHHHHHHH-TCCCC-
T ss_pred             EEEEEcCCcCcHHHHHHHHHhcccCCeEEecChHHHHHHC-CCCccC
Confidence            9999999999999999999999999999999999999999 999973

>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.87  E-value=1.1e-22  Score=168.53  Aligned_cols=104  Identities=17%  Similarity=0.271  Sum_probs=91.7

Q ss_pred             ccCHHHHHHHhhC-CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCC
Q 017338          245 IWTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (373)
Q Consensus       245 ~is~~el~~~~~~-~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~  323 (373)
                      .|+++++.+.+.. ++.+|||+|++.||           +.||||||+|+|..++             ...+.++..+++
T Consensus        25 ~Is~~el~~~l~~~~~~~liDvR~~~e~-----------~~ghIpGAi~ip~~~l-------------~~~~~~l~~~~~   80 (136)
T d1yt8a1          25 SLAAEEVQALLDARAEAVILDARRFDEY-----------QTMSIPGGISVPGAEL-------------VLRVAELAPDPR   80 (136)
T ss_dssp             EECHHHHHHHHHTTCSEEEEECSCHHHH-----------HHSBCTTCEECCGGGH-------------HHHHHHHCCSTT
T ss_pred             ccCHHHHHHHHhcCCCcEEEEcCChhhc-----------cceecCCchhhhhhHH-------------HHHhhccccccc
Confidence            4899999998864 46899999999999           8999999999998664             334555567788


Q ss_pred             CcEEEEcCCchHHHHHHHHHHHcCCCC-ceeecccHHHHhcCCCCCCcCCC
Q 017338          324 KPVVTACGTGVTACILALGLNRLGKHD-VAVYDGSWTEWGAQPDTPVETSS  373 (373)
Q Consensus       324 ~~IvvyC~~G~ra~~a~~~L~~~G~~~-v~~~~GG~~~W~~~~g~Pv~~~~  373 (373)
                      ++||+||.+|.+|..++..|+.+||+| |++|+||+.+|..+ |+|+++|.
T Consensus        81 ~~iV~~C~~g~rs~~aa~~L~~~G~~~~V~~L~GG~~~W~~~-G~pve~g~  130 (136)
T d1yt8a1          81 TRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGTIGWTLA-GQQLEHGQ  130 (136)
T ss_dssp             SEEEEECSSSHHHHHHHHHHHHTTCSSCEEEETTHHHHHHHT-TCCCBCSC
T ss_pred             ceEEEEcCCCCchHHHHHHHHHcCCCceEEEeCCcHHHHHHC-CCCceeCC
Confidence            999999999999999999999999986 99999999999999 99999874

>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.87  E-value=5.1e-22  Score=164.48  Aligned_cols=106  Identities=22%  Similarity=0.283  Sum_probs=92.6

Q ss_pred             CcccHHHHHHhcCC-CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 017338           76 PVVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (373)
Q Consensus        76 ~~is~~~l~~~l~~-~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi  154 (373)
                      +.|++++|.+++++ ++++|||+|         +..+|+.||||||+|+|...                 |...+..+..
T Consensus        24 ~~Is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghIpGAi~ip~~~-----------------l~~~~~~l~~   77 (136)
T d1yt8a1          24 PSLAAEEVQALLDARAEAVILDAR---------RFDEYQTMSIPGGISVPGAE-----------------LVLRVAELAP   77 (136)
T ss_dssp             CEECHHHHHHHHHTTCSEEEEECS---------CHHHHHHSBCTTCEECCGGG-----------------HHHHHHHHCC
T ss_pred             CccCHHHHHHHHhcCCCcEEEEcC---------ChhhccceecCCchhhhhhH-----------------HHHHhhcccc
Confidence            46999999998854 569999996         55899999999999999876                 4447778888


Q ss_pred             CCCCeEEEEcCCCCchHHHHHHHHHHcCCCc-eEEecCCHHHHHhCCCCcccCCC
Q 017338          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDR-VWVLDGGLPRWRASGYDVESSAS  208 (373)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~-v~~L~GG~~~W~~~g~pv~~~~~  208 (373)
                      +++++||+||..|.+ +..++..|+..||+| |++|+||+.+|+.+|+|++++.+
T Consensus        78 ~~~~~iV~~C~~g~r-s~~aa~~L~~~G~~~~V~~L~GG~~~W~~~G~pve~g~~  131 (136)
T d1yt8a1          78 DPRTRVIVNCAGRTR-SIIGTQSLLNAGIPNPVAALRNGTIGWTLAGQQLEHGQT  131 (136)
T ss_dssp             STTSEEEEECSSSHH-HHHHHHHHHHTTCSSCEEEETTHHHHHHHTTCCCBCSCC
T ss_pred             cccceEEEEcCCCCc-hHHHHHHHHHcCCCceEEEeCCcHHHHHHCCCCceeCCC
Confidence            899999999997764 888999999999986 99999999999999999998863

>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.86  E-value=6.3e-22  Score=164.78  Aligned_cols=114  Identities=23%  Similarity=0.383  Sum_probs=95.4

Q ss_pred             HHHHHHhc---CCCCeEEEEeecCCCCCCCCChhhhh----------------hCCCcCceecCcccccccCCCCCCCCC
Q 017338           80 VDWLHANL---REPDLKVLDASWYMPDEQRNPFQEYQ----------------VAHIPGALFFDVDGVADRTTNLPHMLP  140 (373)
Q Consensus        80 ~~~l~~~l---~~~~~~iiDvR~~~~~~~r~~~~ey~----------------~gHIpGAi~ip~~~l~~~~~~~~~~l~  140 (373)
                      .+++.+.+   ++++.+|||+|         +.++|.                .||||||+|+|+..+.+..    .++.
T Consensus         6 ~~~v~~~~~~~~~~~~~lvD~R---------~~~ey~G~~~~~~~~~~~~~~r~GhIpgA~nlp~~~~~~~~----~~~~   72 (141)
T d1uara2           6 RDDVLEHIIKVKEGKGALVDVR---------SPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPD----GTFK   72 (141)
T ss_dssp             HHHHHHHHHHHHTTSEEEEECS---------CHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTT----SCBC
T ss_pred             HHHHHHHHHHhhCCCcEEEeCC---------CHHHcCCccCcccccCcccceeeeEeCCccccccccccccc----cccc
Confidence            34444433   45689999997         457775                7999999999999876533    4678


Q ss_pred             CHHHHHHHHHHcCCCCCCeEEEEcCCCCchHHHHHHHHHH-cCCCceEEecCCHHHHHh-CCCCcccCC
Q 017338          141 SEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRV-FGHDRVWVLDGGLPRWRA-SGYDVESSA  207 (373)
Q Consensus       141 ~~e~~~~~l~~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~-~G~~~v~~L~GG~~~W~~-~g~pv~~~~  207 (373)
                      ++++|++.+..+|++++++||+||+.|.+ |+.+|+.|+. +||++|++|+|||.+|.+ .++||++++
T Consensus        73 ~~~~~~~~~~~~gi~~d~~vV~yC~~G~~-As~~~~~l~~~~G~~~v~~ydGs~~eW~~~~~~Pv~~g~  140 (141)
T d1uara2          73 SAEELRALYEPLGITKDKDIVVYCRIAER-SSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKGE  140 (141)
T ss_dssp             CHHHHHHHHGGGTCCTTSEEEEECSSHHH-HHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCSC
T ss_pred             cHHHHHHHHHHhCCCCCCeEEEEecCcch-HHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCC
Confidence            89999999999999999999999997765 8999999986 799999999999999966 799999874

>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Sulfurtransferase GlpE
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=1.3e-22  Score=161.51  Aligned_cols=99  Identities=23%  Similarity=0.317  Sum_probs=88.0

Q ss_pred             ccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCC
Q 017338          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (373)
Q Consensus       245 ~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~  324 (373)
                      .||++|+.+.+++++.+|||+|++.||           ..||||||+|+|..+             |++.+.+  +++++
T Consensus         6 ~Is~~e~~~~l~~~~~~liDvR~~~e~-----------~~ghI~gA~~ip~~~-------------l~~~~~~--~~~~~   59 (108)
T d1gmxa_           6 CINVADAHQKLQEKEAVLVDIRDPQSF-----------AMGHAVQAFHLTNDT-------------LGAFMRD--NDFDT   59 (108)
T ss_dssp             EECHHHHHHHHHTTCCEEEECSCHHHH-----------HHCEETTCEECCHHH-------------HHHHHHH--SCTTS
T ss_pred             EeCHHHHHHHHHCCCeEEEECCCHHHH-----------HhcCCCCcccccchh-------------HHHHhhh--ccccC
Confidence            488999999999889999999999999           899999999999755             4445553  68899


Q ss_pred             cEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcC
Q 017338          325 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  371 (373)
Q Consensus       325 ~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~  371 (373)
                      +||+||.+|.||..++..|..+||+||++|+||+.+|.++  +|++.
T Consensus        60 ~ivv~c~~g~rs~~~a~~L~~~G~~~v~~l~GG~~~W~~~--~p~e~  104 (108)
T d1gmxa_          60 PVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ--FPAEV  104 (108)
T ss_dssp             CEEEECSSSSHHHHHHHHHHHHTCSSEEEETTHHHHHHHH--CGGGE
T ss_pred             cccccCCCChHHHHHHHHHHHcCCCCEEEEcChHHHHHHc--CCCcc
Confidence            9999999999999999999999999999999999999754  78764

>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Thiosulfate sulfurtransferase/Senescence-associated protein
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.84  E-value=1.1e-21  Score=158.80  Aligned_cols=112  Identities=20%  Similarity=0.189  Sum_probs=89.6

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 017338           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (373)
Q Consensus        75 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi  154 (373)
                      ...|+++.+.+++++ +.+|||||         +..+|..||||||+|+|+..+...     ......+.+.+...  .+
T Consensus         7 p~~i~~~~a~~l~~~-g~~liDvR---------~~~e~~~ghi~ga~~ip~~~~~~~-----~~~~~~~~~~~~~~--~~   69 (119)
T d1tq1a_           7 PSSVSVTVAHDLLLA-GHRYLDVR---------TPEEFSQGHACGAINVPYMNRGAS-----GMSKNTDFLEQVSS--HF   69 (119)
T ss_dssp             CEEEEHHHHHHHHHH-TCCEEEES---------CHHHHHHCCBTTBEECCSCCCSTT-----TCCCTTTHHHHHTT--TC
T ss_pred             CCccCHHHHHHHHHC-cCEEEECC---------CHHHHHcCCCCCccchhhcccccc-----cccccHHHHHHHHH--hc
Confidence            446899999988876 67899996         458999999999999998764321     12223334444432  45


Q ss_pred             CCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcc
Q 017338          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE  204 (373)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~  204 (373)
                      +++++||+||..|.+ +.+++.+|..+||+||++|+||+.+|.++|+|++
T Consensus        70 ~~~~~iv~~C~~G~r-s~~a~~~L~~~G~~nv~~l~GG~~~W~~~g~P~e  118 (119)
T d1tq1a_          70 GQSDNIIVGCQSGGR-SIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTK  118 (119)
T ss_dssp             CTTSSEEEEESSCSH-HHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC
T ss_pred             CCCcEEEEEcCCcCc-HHHHHHHHHhcccCCeEEecChHHHHHHCCCCcc
Confidence            688999999997765 8999999999999999999999999999999986

>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.84  E-value=4.8e-21  Score=150.22  Aligned_cols=99  Identities=24%  Similarity=0.274  Sum_probs=84.4

Q ss_pred             CcccHHHHHHhcC-CCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 017338           76 PVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (373)
Q Consensus        76 ~~is~~~l~~~l~-~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi  154 (373)
                      .++|+++|++.+. +++++|||||         +..+|..||||||+|+|...+                 ...+..+..
T Consensus         2 ~v~S~~~l~~~l~~~~~~~liDvR---------~~~e~~~ghIpgAi~~~~~~~-----------------~~~~~~~~~   55 (101)
T d1yt8a2           2 AVRTFHDIRAALLARRELALLDVR---------EEDPFAQAHPLFAANLPLSRL-----------------ELEIHARVP   55 (101)
T ss_dssp             EEECHHHHHHHHHHTCCBEEEECS---------CHHHHTTSBCTTCEECCGGGH-----------------HHHHHHHSC
T ss_pred             CcCcHHHHHHHHHCCCCeEEEECC---------CHHHHHhccCCCcccccccch-----------------hhhhhhccc
Confidence            3578999999774 4579999996         468999999999999998764                 335566677


Q ss_pred             CCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCC
Q 017338          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGY  201 (373)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~  201 (373)
                      .++++||+||..+.+ +.++++.|+.+||+||++|+||+.+|+++|.
T Consensus        56 ~~~~~vv~~~~~g~~-s~~~~~~l~~~G~~nV~~l~GG~~~W~~aGg  101 (101)
T d1yt8a2          56 RRDTPITVYDDGEGL-APVAAQRLHDLGYSDVALLDGGLSGWRNAGG  101 (101)
T ss_dssp             CTTSCEEEECSSSSH-HHHHHHHHHHTTCSSEEEETTHHHHHHHTTC
T ss_pred             ccCceeeeccchhhh-HHHHHHHHHHcCCCcEEEeCChHHHHHHCcC
Confidence            788999999987664 8999999999999999999999999999884

>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.83  E-value=4.2e-22  Score=169.08  Aligned_cols=102  Identities=20%  Similarity=0.333  Sum_probs=91.2

Q ss_pred             ccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCC
Q 017338          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (373)
Q Consensus       245 ~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~  324 (373)
                      .|+++++.+++++++.+|||+|+..||           +.||||||+|+|+..+..             .+.  .+++++
T Consensus         6 ~Is~~el~~~l~~~~~~ivDvR~~~e~-----------~~ghIpga~~~~~~~~~~-------------~~~--~~~~~~   59 (157)
T d1yt8a3           6 TIDPTTLADWLGEPGTRVLDFTASANY-----------AKRHIPGAAWVLRSQLKQ-------------ALE--RLGTAE   59 (157)
T ss_dssp             EECHHHHHHHTTSTTEEEEECSCHHHH-----------HHCBCTTCEECCGGGHHH-------------HHH--HHCCCS
T ss_pred             EECHHHHHHHHhCCCeEEEEeCCHHHH-----------hhcccccceecccccccc-------------ccc--ccccCc
Confidence            489999999998888999999999999           899999999999976532             222  257889


Q ss_pred             cEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCCC
Q 017338          325 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETSS  373 (373)
Q Consensus       325 ~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~~  373 (373)
                      +||+||.+|.+|..++..|..+||++|++|+||+.+|.++ |+|+++++
T Consensus        60 ~vv~~c~~g~rs~~~a~~l~~~G~~~v~~L~GG~~~W~~a-Glp~~~~~  107 (157)
T d1yt8a3          60 RYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSAWVAA-GLPTEDGE  107 (157)
T ss_dssp             EEEEECSSSHHHHHHHHHHHHHHCSCEEEETTHHHHHHHT-TCCCBCSS
T ss_pred             ceeeccCCcchHHHHHHHHhcccCceEEEecCCHHHHhhC-CCCCcCCC
Confidence            9999999999999999999999999999999999999999 99999763

>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.83  E-value=3.4e-21  Score=151.13  Aligned_cols=96  Identities=20%  Similarity=0.317  Sum_probs=83.2

Q ss_pred             ccCHHHHHHHh-hCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCC
Q 017338          245 IWTLEQVKRNI-EEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (373)
Q Consensus       245 ~is~~el~~~~-~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~  323 (373)
                      +.|.+|+++.+ ++++++|||+|++.||           ..||||||+|+|...+.             ..+.....+++
T Consensus         3 v~S~~~l~~~l~~~~~~~liDvR~~~e~-----------~~ghIpgAi~~~~~~~~-------------~~~~~~~~~~~   58 (101)
T d1yt8a2           3 VRTFHDIRAALLARRELALLDVREEDPF-----------AQAHPLFAANLPLSRLE-------------LEIHARVPRRD   58 (101)
T ss_dssp             EECHHHHHHHHHHTCCBEEEECSCHHHH-----------TTSBCTTCEECCGGGHH-------------HHHHHHSCCTT
T ss_pred             cCcHHHHHHHHHCCCCeEEEECCCHHHH-----------HhccCCCcccccccchh-------------hhhhhcccccC
Confidence            46889999876 4557999999999999           78999999999987653             22334456788


Q ss_pred             CcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcC
Q 017338          324 KPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       324 ~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~  364 (373)
                      ++||+||.+|.+|..++..|+.+||+||++|+|||.+|.++
T Consensus        59 ~~vv~~~~~g~~s~~~~~~l~~~G~~nV~~l~GG~~~W~~a   99 (101)
T d1yt8a2          59 TPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLSGWRNA   99 (101)
T ss_dssp             SCEEEECSSSSHHHHHHHHHHHTTCSSEEEETTHHHHHHHT
T ss_pred             ceeeeccchhhhHHHHHHHHHHcCCCcEEEeCChHHHHHHC
Confidence            99999999999999999999999999999999999999987

>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.83  E-value=7.6e-21  Score=161.23  Aligned_cols=104  Identities=27%  Similarity=0.397  Sum_probs=90.4

Q ss_pred             CcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 017338           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (373)
Q Consensus        76 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~  155 (373)
                      ..||+++|.+++++++++|||||         +..+|..||||||+|+|...+..                 .+..+  .
T Consensus         5 ~~Is~~el~~~l~~~~~~ivDvR---------~~~e~~~ghIpga~~~~~~~~~~-----------------~~~~~--~   56 (157)
T d1yt8a3           5 DTIDPTTLADWLGEPGTRVLDFT---------ASANYAKRHIPGAAWVLRSQLKQ-----------------ALERL--G   56 (157)
T ss_dssp             CEECHHHHHHHTTSTTEEEEECS---------CHHHHHHCBCTTCEECCGGGHHH-----------------HHHHH--C
T ss_pred             CEECHHHHHHHHhCCCeEEEEeC---------CHHHHhhcccccceecccccccc-----------------ccccc--c
Confidence            45999999999998899999996         45899999999999999876432                 33333  5


Q ss_pred             CCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCCC
Q 017338          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (373)
Q Consensus       156 ~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~  208 (373)
                      ++++||+||..|.+ ++.+++.|..+||++|++|+||+.+|+++|+|++++..
T Consensus        57 ~~~~vv~~c~~g~r-s~~~a~~l~~~G~~~v~~L~GG~~~W~~aGlp~~~~~~  108 (157)
T d1yt8a3          57 TAERYVLTCGSSLL-ARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTEDGES  108 (157)
T ss_dssp             CCSEEEEECSSSHH-HHHHHHHHHHHHCSCEEEETTHHHHHHHTTCCCBCSSC
T ss_pred             cCcceeeccCCcch-HHHHHHHHhcccCceEEEecCCHHHHhhCCCCCcCCCC
Confidence            78899999997765 88999999999999999999999999999999999764

>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=4.6e-21  Score=155.01  Aligned_cols=108  Identities=25%  Similarity=0.361  Sum_probs=94.8

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhh-----------hCCCcCceecCcccccccCCCCCCCCCCH
Q 017338           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ-----------VAHIPGALFFDVDGVADRTTNLPHMLPSE  142 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~-----------~gHIpGAi~ip~~~l~~~~~~~~~~l~~~  142 (373)
                      +..+++.+++...+++++.+|||+|         +.++|.           .||||||+|+|+..+..     ...+.+.
T Consensus         2 p~~~~~~~ev~~~~~~~~~~liD~R---------~~~~f~G~~~~~~~~~~~G~Ipga~~~~~~~~~~-----~~~~~~~   67 (120)
T d1urha2           2 PEAVVKVTDVLLASHENTAQIIDAR---------PAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR-----EGELKTT   67 (120)
T ss_dssp             GGGBCCHHHHHHHHHHTCSEEEECS---------CHHHHSSCCCC----CCSSSCTTCEECCGGGGBS-----SSSBCCH
T ss_pred             hhHHccHHHHHHHhhCCCcEEEeCC---------CHHHcCcccCCcccccccccccccchhchhhccc-----ccccCCH
Confidence            4567899999999998899999997         557774           79999999999987654     3456778


Q ss_pred             HHHHHHHHHcCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHH
Q 017338          143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW  196 (373)
Q Consensus       143 e~~~~~l~~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W  196 (373)
                      +++++.+...+++++++||+||+.|.+ |++++++|+.+||++|++|+|||.+|
T Consensus        68 ~~~~~~~~~~g~~~~~~ii~yC~sG~~-A~~~~~~L~~lG~~~v~~y~Gs~~eW  120 (120)
T d1urha2          68 DELDAIFFGRGVSYDKPIIVSCGSGVT-AAVVLLALATLDVPNVKLYDGAWSEW  120 (120)
T ss_dssp             HHHHHHHHTTTCCSSSCEEEECCSSST-HHHHHHHHHHTTCSSCEEECCSCCC-
T ss_pred             HHhhhhhhhcccCccCceEEEccchhH-HHHHHHHHHHcCCCCceEcCCChhhC
Confidence            899999999999999999999998775 99999999999999999999999998

>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Sulfurtransferase GlpE
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=4.1e-21  Score=152.65  Aligned_cols=100  Identities=20%  Similarity=0.284  Sum_probs=86.1

Q ss_pred             CcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 017338           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (373)
Q Consensus        76 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~gi~  155 (373)
                      ..||++++.+++++++++|||+|         +..+|..||||||+|+|.+.                 |.+.+..+  +
T Consensus         5 ~~Is~~e~~~~l~~~~~~liDvR---------~~~e~~~ghI~gA~~ip~~~-----------------l~~~~~~~--~   56 (108)
T d1gmxa_           5 ECINVADAHQKLQEKEAVLVDIR---------DPQSFAMGHAVQAFHLTNDT-----------------LGAFMRDN--D   56 (108)
T ss_dssp             EEECHHHHHHHHHTTCCEEEECS---------CHHHHHHCEETTCEECCHHH-----------------HHHHHHHS--C
T ss_pred             CEeCHHHHHHHHHCCCeEEEECC---------CHHHHHhcCCCCcccccchh-----------------HHHHhhhc--c
Confidence            45999999999998899999996         45899999999999999865                 44455554  6


Q ss_pred             CCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCccc
Q 017338          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (373)
Q Consensus       156 ~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~  205 (373)
                      ++++||+||..|.+ +.++++.|+..||++|++|+||+.+|+++ +|++.
T Consensus        57 ~~~~ivv~c~~g~r-s~~~a~~L~~~G~~~v~~l~GG~~~W~~~-~p~e~  104 (108)
T d1gmxa_          57 FDTPVMVMCYHGNS-SKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEV  104 (108)
T ss_dssp             TTSCEEEECSSSSH-HHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGE
T ss_pred             ccCcccccCCCChH-HHHHHHHHHHcCCCCEEEEcChHHHHHHc-CCCcc
Confidence            78999999997765 88999999999999999999999999754 78764

>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud)
species: Wolinella succinogenes [TaxId: 844]

Probab=99.83  E-value=2.1e-21  Score=160.96  Aligned_cols=104  Identities=18%  Similarity=0.327  Sum_probs=90.0

Q ss_pred             cccCHHHHHHHhh-CCCcEEEEecCCCccCCCCCCCCCCCCccc---CCCCcccCcccccccCCCCCCHHHHHHHHHHcC
Q 017338          244 LIWTLEQVKRNIE-EGTYQLVDARSKARFDGDAPEPRKGIRSGH---VPGSKCIPFPQMLDASQTLLPADELKKRFEQEG  319 (373)
Q Consensus       244 ~~is~~el~~~~~-~~~~~iIDvR~~~e~~G~~~~~~~~~~~Gh---IpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~g  319 (373)
                      ..||++|+.+++. +++++|||+|++.||           +.+|   |+||+|+|...+             +..+.+.+
T Consensus        23 ~~Isp~e~~~ll~~~~~~~lIDvR~~~E~-----------~~~hip~i~~a~~ip~~~l-------------~~~~~~~~   78 (137)
T d1qxna_          23 VMLSPKDAYKLLQENPDITLIDVRDPDEL-----------KAMGKPDVKNYKHMSRGKL-------------EPLLAKSG   78 (137)
T ss_dssp             EEECHHHHHHHHHHCTTSEEEECCCHHHH-----------HHTCEECCSSEEECCTTTS-------------HHHHHHHC
T ss_pred             CEEcHHHHHHHHHcCcCEEEEECCcHHHH-----------HHhccccccccccCCcccc-------------cccccccc
Confidence            3689999999986 467999999999999           6777   667888887554             23455567


Q ss_pred             CCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          320 ISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       320 i~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      ++++++||+||.+|.||..++..|+.+||+||++|+||+.+|.++ |+|++..
T Consensus        79 ~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~nV~~l~GG~~~W~~~-g~P~~~~  130 (137)
T d1qxna_          79 LDPEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEE-GLPSLDR  130 (137)
T ss_dssp             CCTTSCEEEECCSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHT-TCCEECC
T ss_pred             cCcccceeeeecccchHHHHHHHHHHcCCCcEEEecCHHHHHHHc-CCCCCCC
Confidence            999999999999999999999999999999999999999999999 9998754

>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud)
species: Wolinella succinogenes [TaxId: 844]

Probab=99.82  E-value=2.7e-20  Score=154.13  Aligned_cols=106  Identities=17%  Similarity=0.275  Sum_probs=90.7

Q ss_pred             CCcccHHHHHHhcC-CCCeEEEEeecCCCCCCCCChhhhhhCC---CcCceecCcccccccCCCCCCCCCCHHHHHHHHH
Q 017338           75 EPVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAH---IPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS  150 (373)
Q Consensus        75 ~~~is~~~l~~~l~-~~~~~iiDvR~~~~~~~r~~~~ey~~gH---IpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~  150 (373)
                      ...||+++++++++ +++++|||||         ...||..+|   |+||+|+|...+.                 ..+.
T Consensus        22 ~~~Isp~e~~~ll~~~~~~~lIDvR---------~~~E~~~~hip~i~~a~~ip~~~l~-----------------~~~~   75 (137)
T d1qxna_          22 MVMLSPKDAYKLLQENPDITLIDVR---------DPDELKAMGKPDVKNYKHMSRGKLE-----------------PLLA   75 (137)
T ss_dssp             SEEECHHHHHHHHHHCTTSEEEECC---------CHHHHHHTCEECCSSEEECCTTTSH-----------------HHHH
T ss_pred             CCEEcHHHHHHHHHcCcCEEEEECC---------cHHHHHHhccccccccccCCccccc-----------------cccc
Confidence            45699999999996 5689999996         458999999   6678899877642                 3566


Q ss_pred             HcCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCcccCC
Q 017338          151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (373)
Q Consensus       151 ~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~  207 (373)
                      ..+++++++|||||..|.+ |.+++..|+.+||+||++|+||+.+|.++|+|+....
T Consensus        76 ~~~~~~~~~ivvyC~~G~r-s~~aa~~L~~~G~~nV~~l~GG~~~W~~~g~P~~~~~  131 (137)
T d1qxna_          76 KSGLDPEKPVVVFCKTAAR-AALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRS  131 (137)
T ss_dssp             HHCCCTTSCEEEECCSSSC-HHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECCC
T ss_pred             ccccCcccceeeeecccch-HHHHHHHHHHcCCCcEEEecCHHHHHHHcCCCCCCCC
Confidence            7788999999999997765 9999999999999999999999999999999987653

>d1t3ka_ c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Dual specificity phosphatase Cdc25
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.81  E-value=1.4e-20  Score=154.90  Aligned_cols=111  Identities=21%  Similarity=0.303  Sum_probs=87.8

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      ....|++++|.+++++++++|||||        + .++|+.||||||+|+|+..+.+             .+.+.+..+ 
T Consensus         6 ~v~~I~~~el~~~~~~~~v~iIDvR--------~-~~e~~~ghIpgAinip~~~~~~-------------~~~~~~~~~-   62 (132)
T d1t3ka_           6 SISYITSTQLLPLHRRPNIAIIDVR--------D-EERNYDGHIAGSLHYASGSFDD-------------KISHLVQNV-   62 (132)
T ss_dssp             SSEEECTTTTTTCCCCTTEEEEEES--------C-SHHHHSSCCCSSEEECCSSSST-------------THHHHHHTC-
T ss_pred             CCCEECHHHHHHHHhCCCeEEEEcc--------C-HHHHHhccCcccceeeeecccc-------------ccccccccc-
Confidence            4567999999999999999999996        4 4899999999999999987654             234344433 


Q ss_pred             CCCCCeEEEEcCCCCchHHHHHHH--------HHHcCCCceEEecCCHHHHHhCCCCcccCCC
Q 017338          154 LENKDGLVVYDGKGIFSAARVWWM--------FRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (373)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~ra~~~--------L~~~G~~~v~~L~GG~~~W~~~g~pv~~~~~  208 (373)
                       .+++.+|+||..+..++..++..        |..+||+||++|+||+.+|+++|+|+.+...
T Consensus        63 -~~~~~iv~~c~~~~~~~~~aa~~l~~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~pv~~~~~  124 (132)
T d1t3ka_          63 -KDKDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAE  124 (132)
T ss_dssp             -CSCCEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCSC
T ss_pred             -ccccceEEEeccccccchHHHHHHHHHHHHHHHhcCCCEEEEeCChHHHHHHcCCCcccCCC
Confidence             46788999998766554444433        3457999999999999999999999987653

>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.79  E-value=4.3e-20  Score=151.55  Aligned_cols=97  Identities=26%  Similarity=0.297  Sum_probs=84.5

Q ss_pred             ccCHHHHHHHhhCC--CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCC
Q 017338          245 IWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  322 (373)
Q Consensus       245 ~is~~el~~~~~~~--~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~  322 (373)
                      .|+++++.+.+.++  +++|||+|++.||           +.||||||+|+|+.++...             ......++
T Consensus        24 ~I~~~e~~~~l~~~~~~~~liDvR~~~e~-----------~~ghipgai~~p~~~~~~~-------------~~~~~~~~   79 (130)
T d1yt8a4          24 RLDLAGLAQWQDEHDRTTYLLDVRTPEEY-----------EAGHLPGSRSTPGGQLVQE-------------TDHVASVR   79 (130)
T ss_dssp             EECHHHHHHHHHCTTSCEEEEECSCHHHH-----------HHCBCTTCEECCHHHHHHS-------------HHHHCCSB
T ss_pred             ccCHHHHHHHHHccCCCEEEEECCCcHHH-----------hcCccCCcccccccccccc-------------cccccCCc
Confidence            58999999998754  4799999999999           8999999999999776432             23346789


Q ss_pred             CCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccHHHHhcCCC
Q 017338          323 EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPD  366 (373)
Q Consensus       323 ~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~~~W~~~~g  366 (373)
                      +++||+||.+|.||..++..|+.+|| +|++|+||+.+|....|
T Consensus        80 ~~~ivl~C~~G~rS~~aa~~L~~~G~-~v~~l~GG~~aw~~~~g  122 (130)
T d1yt8a4          80 GARLVLVDDDGVRANMSASWLAQMGW-QVAVLDGLSEADFSERG  122 (130)
T ss_dssp             TCEEEEECSSSSHHHHHHHHHHHTTC-EEEEECSCCGGGCCBCS
T ss_pred             cceEEeecCCCccHHHHHHHHHHcCC-CeEEEcCchHHHHHhcC
Confidence            99999999999999999999999999 79999999999987744

>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

Probab=99.78  E-value=8.3e-20  Score=151.50  Aligned_cols=107  Identities=17%  Similarity=0.206  Sum_probs=84.2

Q ss_pred             CCCeEEEEeecCCCCCCCCChhhhh-----------hCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHc-----
Q 017338           89 EPDLKVLDASWYMPDEQRNPFQEYQ-----------VAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL-----  152 (373)
Q Consensus        89 ~~~~~iiDvR~~~~~~~r~~~~ey~-----------~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~-----  152 (373)
                      +++++|||+|         +.++|.           .||||||+|+|+..+...... ...+.+++++.+.+..+     
T Consensus        10 ~p~~vlvD~R---------~~~ef~G~~~~~~~~~~~GHIpgAvnip~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~   79 (139)
T d1okga2          10 PPQAIITDAR---------SADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGD-GKVLRSEEEIRHNIMTVVQGAG   79 (139)
T ss_dssp             CTTCCEEECS---------CHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSS-SCEECCHHHHHHHHHTTCC---
T ss_pred             CCCeEEEeCC---------CHHHhCCcCCCcccCCcCceeCCCeeccchhhcccccc-ccccCCHHHhhhhhhhhhhhcc
Confidence            3589999997         457776           899999999999875443222 23355677777777654     


Q ss_pred             CCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHh-CCCCcccC
Q 017338          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGYDVESS  206 (373)
Q Consensus       153 gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~-~g~pv~~~  206 (373)
                      ++.++++||+||+.|.+ |+++||+|+.+||++|++|+|||.+|.+ .++||+++
T Consensus        80 ~~~~~~~vV~yC~sG~~-Aa~~~~~L~~~G~~~v~vydGsw~eW~~~~~~Pv~~~  133 (139)
T d1okga2          80 DAADLSSFVFSCGSGVT-ACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRS  133 (139)
T ss_dssp             --CCCTTSEEECSSSST-HHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHH
T ss_pred             CCCCCCeEEEECCCcHH-HHHHHHHHHHhCCCCccCCCCCHHHHhCCCCCCeeec
Confidence            67788899999998765 9999999999999999999999999965 67888875

>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.77  E-value=1.6e-19  Score=148.11  Aligned_cols=100  Identities=20%  Similarity=0.146  Sum_probs=84.7

Q ss_pred             CcccHHHHHHhcCCC--CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 017338           76 PVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (373)
Q Consensus        76 ~~is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~l~~~g  153 (373)
                      ..|++++++++++++  +++|||||        + .+||..||||||+|+|+..+..                 ....+.
T Consensus        23 ~~I~~~e~~~~l~~~~~~~~liDvR--------~-~~e~~~ghipgai~~p~~~~~~-----------------~~~~~~   76 (130)
T d1yt8a4          23 ERLDLAGLAQWQDEHDRTTYLLDVR--------T-PEEYEAGHLPGSRSTPGGQLVQ-----------------ETDHVA   76 (130)
T ss_dssp             EEECHHHHHHHHHCTTSCEEEEECS--------C-HHHHHHCBCTTCEECCHHHHHH-----------------SHHHHC
T ss_pred             cccCHHHHHHHHHccCCCEEEEECC--------C-cHHHhcCccCCccccccccccc-----------------cccccc
Confidence            569999999998654  58999996        4 5899999999999999876432                 445678


Q ss_pred             CCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCCHHHHHhCCCCc
Q 017338          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  203 (373)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG~~~W~~~g~pv  203 (373)
                      ..++++||+||..|.+ |..++..|+.+|| ++++|+||+.+|.+++...
T Consensus        77 ~~~~~~ivl~C~~G~r-S~~aa~~L~~~G~-~v~~l~GG~~aw~~~~g~~  124 (130)
T d1yt8a4          77 SVRGARLVLVDDDGVR-ANMSASWLAQMGW-QVAVLDGLSEADFSERGAW  124 (130)
T ss_dssp             CSBTCEEEEECSSSSH-HHHHHHHHHHTTC-EEEEECSCCGGGCCBCSSC
T ss_pred             CCccceEEeecCCCcc-HHHHHHHHHHcCC-CeEEEcCchHHHHHhcCCC
Confidence            8899999999997754 8999999999999 7999999999998876544

>d1t3ka_ c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Dual specificity phosphatase Cdc25
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.77  E-value=1.9e-20  Score=154.08  Aligned_cols=105  Identities=16%  Similarity=0.217  Sum_probs=83.0

Q ss_pred             ccCHHHHHHHhhCCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCC
Q 017338          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (373)
Q Consensus       245 ~is~~el~~~~~~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~  324 (373)
                      .|+++|+.+++++++.+|||+|++.||           ..||||||+|+|+..+.+.         +.+++.  .+.+++
T Consensus         9 ~I~~~el~~~~~~~~v~iIDvR~~~e~-----------~~ghIpgAinip~~~~~~~---------~~~~~~--~~~~~~   66 (132)
T d1t3ka_           9 YITSTQLLPLHRRPNIAIIDVRDEERN-----------YDGHIAGSLHYASGSFDDK---------ISHLVQ--NVKDKD   66 (132)
T ss_dssp             EECTTTTTTCCCCTTEEEEEESCSHHH-----------HSSCCCSSEEECCSSSSTT---------HHHHHH--TCCSCC
T ss_pred             EECHHHHHHHHhCCCeEEEEccCHHHH-----------HhccCcccceeeeeccccc---------cccccc--cccccc
Confidence            578889998888888999999999999           8999999999999876432         333344  356788


Q ss_pred             cEEEEcCCch-HHHHHHHH--------HHHcCCCCceeecccHHHHhcCCCCCCcCC
Q 017338          325 PVVTACGTGV-TACILALG--------LNRLGKHDVAVYDGSWTEWGAQPDTPVETS  372 (373)
Q Consensus       325 ~IvvyC~~G~-ra~~a~~~--------L~~~G~~~v~~~~GG~~~W~~~~g~Pv~~~  372 (373)
                      +||+||..|. ++..++..        |..+||+||++|+||+.+|.++ |+|+.++
T Consensus        67 ~iv~~c~~~~~~~~~aa~~l~~~~~~~l~~~G~~~v~~l~GG~~~W~~~-g~pv~~~  122 (132)
T d1t3ka_          67 TLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEAS-GKPVCRC  122 (132)
T ss_dssp             EEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHH-SCSSCCC
T ss_pred             ceEEEeccccccchHHHHHHHHHHHHHHHhcCCCEEEEeCChHHHHHHc-CCCcccC
Confidence            9999997554 44333332        3357999999999999999999 9999864

>d2gwfa1 c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Ubiquitin carboxyl-terminal hydrolase 8, USP8
domain: Ubiquitin carboxyl-terminal hydrolase 8, USP8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.7e-17  Score=136.40  Aligned_cols=110  Identities=18%  Similarity=0.218  Sum_probs=75.0

Q ss_pred             cccHHHHHHhcCCC--CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCC--CCCCCCCHHHHHHHHHHc
Q 017338           77 VVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN--LPHMLPSEEAFAAAVSAL  152 (373)
Q Consensus        77 ~is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~--~~~~l~~~e~~~~~l~~~  152 (373)
                      .||++||.++++++  +++|||+|         +.++|..||||||+|+|...+......  +...++  ......+.  
T Consensus         2 ~Is~~eL~~~l~~~~~~~liiDvR---------~~~ey~~~hI~gAinip~~~l~~~~~~~~l~~~~~--~~~~~~~~--   68 (135)
T d2gwfa1           2 AITAKELYTMMTDKNISLIIMDAR---------RMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLP--DDSKDTWK--   68 (135)
T ss_dssp             EECHHHHHHHHHSTTSCEEEEECS---------CHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSC--HHHHHHHH--
T ss_pred             eECHHHHHHHHhcCCCCEEEEEec---------CCccccCCccCCeEEeCHHHcccccchhhhhhhhh--HHHHHHHh--
Confidence            48999999999764  59999997         568999999999999999877542110  111111  12222333  


Q ss_pred             CCCCCCeEEEEcCCCCchHHHHH-------HHHH-----HcCCCceEEecCCHHHHHhC
Q 017338          153 GLENKDGLVVYDGKGIFSAARVW-------WMFR-----VFGHDRVWVLDGGLPRWRAS  199 (373)
Q Consensus       153 gi~~~~~VVvy~~~g~~~a~ra~-------~~L~-----~~G~~~v~~L~GG~~~W~~~  199 (373)
                      ...+.+.||+||..+......++       ..|.     ..|+.+|++|+||+.+|.+.
T Consensus        69 ~~~~~~~iV~yd~~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~iL~GG~~~w~~~  127 (135)
T d2gwfa1          69 KRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC  127 (135)
T ss_dssp             TTTTSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH
T ss_pred             ccCCCCeEEEEeCCCCcccHHHHHHHHHHHHHHhcccccccCCCcEEEEechHHHHHHh
Confidence            34567899999987654321221       2222     34778999999999999986

>d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=6e-17  Score=137.33  Aligned_cols=101  Identities=16%  Similarity=0.134  Sum_probs=76.7

Q ss_pred             CCcccHHHHHHhcCC------CCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHHH
Q 017338           75 EPVVSVDWLHANLRE------PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA  148 (373)
Q Consensus        75 ~~~is~~~l~~~l~~------~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~~  148 (373)
                      .+.||+++|.+++++      ++++|||||         +..+|..||||||+|+|....                +...
T Consensus        22 ~k~Is~~~l~~ll~~~~~~~~~~~~IIDvR---------~~~Ey~~gHI~gAinip~~~~----------------~~~~   76 (161)
T d1c25a_          22 LKYISPEIMASVLNGKFANLIKEFVIIDCR---------YPYEYEGGHIKGAVNLHMEEE----------------VEDF   76 (161)
T ss_dssp             SCEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHH----------------HHHH
T ss_pred             CCccCHHHHHHHHhhhhhcccCCEEEEECC---------CHHHHHhhhcCCcEEcCcHHH----------------HHHH
Confidence            467999999999875      369999996         458999999999999997542                1111


Q ss_pred             HHH----cCCCCCCeEEEEcCCCCchHHHHHHHHHHc----------CCCceEEecCCHHHHHhCC
Q 017338          149 VSA----LGLENKDGLVVYDGKGIFSAARVWWMFRVF----------GHDRVWVLDGGLPRWRASG  200 (373)
Q Consensus       149 l~~----~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~----------G~~~v~~L~GG~~~W~~~g  200 (373)
                      +..    ....+...||+||..++.++.+++..|+..          ||++|++|+||+.+|.+..
T Consensus        77 l~~~~~~~~~~~~~~vV~yc~~s~~rs~~~a~~l~~~~~~~~~~~~~g~~~V~vL~GG~~~w~~~~  142 (161)
T d1c25a_          77 LLKKPIVPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKC  142 (161)
T ss_dssp             TTTSCCCCCTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHH
T ss_pred             HhhhhhhhhhccCCeEEEEeccccccHHHHHHHHHHHHHhhccccccCCCeEEEECCcHHHHHHHC
Confidence            111    122345568899986655688888888754          9999999999999998753

>d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Erk2 binding domain of Mapk phosphatase mkp-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=7.5e-17  Score=135.59  Aligned_cols=116  Identities=19%  Similarity=0.349  Sum_probs=83.4

Q ss_pred             CCCcccHHHHHHhcC--CCCeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccc-----cCCCCCCCCCCHHHHH
Q 017338           74 KEPVVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD-----RTTNLPHMLPSEEAFA  146 (373)
Q Consensus        74 ~~~~is~~~l~~~l~--~~~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~-----~~~~~~~~l~~~e~~~  146 (373)
                      ....+|++||+++++  +++++|||||         +..+|..||||||+|+|+..+..     .......+++..+...
T Consensus        14 ~~~~~s~e~L~~~l~~~~~~~lilDvR---------~~~ey~~~HI~gAini~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (154)
T d1hzma_          14 MAISKTVAWLNEQLELGNERLLLMDCR---------PQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRD   84 (154)
T ss_dssp             CSSBSCCCCHHHHHHHCSSSCEEECCS---------TTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHH
T ss_pred             ccCccCHHHHHHHHhcCCCCEEEEECC---------CHHHHhcCCCCCCcccCcHHHHhhhccCCcccccccCCcHHHHH
Confidence            345699999999985  4579999997         56899999999999999865321     1233455566555544


Q ss_pred             HHHHHcCCCCCCeEEEEcCCCC------chHHHHHHHHHHcCC--CceEEecCCHHHHHhCCCC
Q 017338          147 AAVSALGLENKDGLVVYDGKGI------FSAARVWWMFRVFGH--DRVWVLDGGLPRWRASGYD  202 (373)
Q Consensus       147 ~~l~~~gi~~~~~VVvy~~~g~------~~a~ra~~~L~~~G~--~~v~~L~GG~~~W~~~g~p  202 (373)
                      ...   +..+++.||+||..+.      ..+.+++++++.+|.  .+|++|+||+.+|++. +|
T Consensus        85 ~~~---~~~~~~~VVvYd~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~iL~GG~~~w~~~-yp  144 (154)
T d1hzma_          85 RFT---RRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCRAFYLEGGFSKFQAE-FS  144 (154)
T ss_dssp             HHH---HSTTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCCCEECCCCHHHHHHH-HC
T ss_pred             HHh---hcCCCCeEEEEcCCCchhhhhHHHHHHHHHHHHHHHhcCCeEEEEeCcHHHHHHH-Ch
Confidence            332   3346778999987532      235677777776654  3899999999999874 44

>d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=7.3e-17  Score=136.80  Aligned_cols=98  Identities=13%  Similarity=0.205  Sum_probs=75.8

Q ss_pred             cccCHHHHHHHhhC------CCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHH
Q 017338          244 LIWTLEQVKRNIEE------GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  317 (373)
Q Consensus       244 ~~is~~el~~~~~~------~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~  317 (373)
                      ..|+++++.+++++      ++++|||+|++.||           ..||||||+|+|..+...            ..+.+
T Consensus        23 k~Is~~~l~~ll~~~~~~~~~~~~IIDvR~~~Ey-----------~~gHI~gAinip~~~~~~------------~~l~~   79 (161)
T d1c25a_          23 KYISPEIMASVLNGKFANLIKEFVIIDCRYPYEY-----------EGGHIKGAVNLHMEEEVE------------DFLLK   79 (161)
T ss_dssp             CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHH-----------HTCEETTCEECCSHHHHH------------HHTTT
T ss_pred             CccCHHHHHHHHhhhhhcccCCEEEEECCCHHHH-----------HhhhcCCcEEcCcHHHHH------------HHHhh
Confidence            46899999998864      36899999999999           799999999999755321            11111


Q ss_pred             ----cCCCCCCcEEEEcC-CchHHHHHHHHHHH----------cCCCCceeecccHHHHhcC
Q 017338          318 ----EGISLEKPVVTACG-TGVTACILALGLNR----------LGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       318 ----~gi~~~~~IvvyC~-~G~ra~~a~~~L~~----------~G~~~v~~~~GG~~~W~~~  364 (373)
                          ....++..||+||. +|.|+..++..|+.          +||++|++|+|||.+|..+
T Consensus        80 ~~~~~~~~~~~~vV~yc~~s~~rs~~~a~~l~~~~~~~~~~~~~g~~~V~vL~GG~~~w~~~  141 (161)
T d1c25a_          80 KPIVPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMK  141 (161)
T ss_dssp             SCCCCCTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHH
T ss_pred             hhhhhhhccCCeEEEEeccccccHHHHHHHHHHHHHhhccccccCCCeEEEECCcHHHHHHH
Confidence                12334456899996 78888888888764          3999999999999999764

>d1ymka1 c.46.1.1 (A:377-550) CDC25b {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=5.6e-16  Score=132.91  Aligned_cols=106  Identities=16%  Similarity=0.192  Sum_probs=77.3

Q ss_pred             CCCcccHHHHHHhcCCC------CeEEEEeecCCCCCCCCChhhhhhCCCcCceecCcccccccCCCCCCCCCCHHHHHH
Q 017338           74 KEPVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (373)
Q Consensus        74 ~~~~is~~~l~~~l~~~------~~~iiDvR~~~~~~~r~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~l~~~e~~~~  147 (373)
                      .-..||+++|.+++.++      +++|||||         +..+|..|||+||+|+|...+....           .+..
T Consensus        21 ~~k~Isp~eL~~ll~~~~~~~~~~~lIID~R---------~~~Ey~~gHI~gAiNi~~~~~~~~~-----------~~~~   80 (174)
T d1ymka1          21 DLKYISPETMVALLTGKFSNIVDKFVIVDCR---------YPYEYEGGHIKTAVNLPLERDAESF-----------LLKS   80 (174)
T ss_dssp             TSCEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHHHHHH-----------HHTT
T ss_pred             CCcEeCHHHHHHHHhhhhhcccCCEEEEECC---------CchhhhhhhcCCccccCchHHHHHH-----------HHHh
Confidence            35679999999999753      58999996         4589999999999999987642200           0000


Q ss_pred             HHHHcCCCCCCeEEEEcCCCCchHHHHHHHHHH----------cCCCceEEecCCHHHHHhC
Q 017338          148 AVSALGLENKDGLVVYDGKGIFSAARVWWMFRV----------FGHDRVWVLDGGLPRWRAS  199 (373)
Q Consensus       148 ~l~~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~----------~G~~~v~~L~GG~~~W~~~  199 (373)
                      .......++...||+||..+..++..++..|+.          .|+++|++|+||+.+|.+.
T Consensus        81 ~~~~~~~~~~~~vV~yc~~s~~r~~~~a~~l~~~~~~~~~~~~~g~~~VyiL~GGf~~f~~~  142 (174)
T d1ymka1          81 PIAPCSLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQ  142 (174)
T ss_dssp             TCCC----CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTT
T ss_pred             hhhhhhhccCceEEEEeCCCCchHHHHHHHHHHHHHHhhhccccCCceEEEecCcHHHHHHh
Confidence            001112245567999999777678888888875          4999999999999999764

>d2gwfa1 c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Ubiquitin carboxyl-terminal hydrolase 8, USP8
domain: Ubiquitin carboxyl-terminal hydrolase 8, USP8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.1e-15  Score=125.33  Aligned_cols=105  Identities=16%  Similarity=0.194  Sum_probs=75.1

Q ss_pred             cCHHHHHHHhhCC--CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCC-----CCCHHHHHHHHHHc
Q 017338          246 WTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQT-----LLPADELKKRFEQE  318 (373)
Q Consensus       246 is~~el~~~~~~~--~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~-----~~~~~~l~~~~~~~  318 (373)
                      ||++||.++++++  +++|||+|++.+|           ..||||||+|||+..+......     ... ...++.+.  
T Consensus         3 Is~~eL~~~l~~~~~~~liiDvR~~~ey-----------~~~hI~gAinip~~~l~~~~~~~~l~~~~~-~~~~~~~~--   68 (135)
T d2gwfa1           3 ITAKELYTMMTDKNISLIIMDARRMQDY-----------QDSCILHSLSVPEEAISPGVTASWIEAHLP-DDSKDTWK--   68 (135)
T ss_dssp             ECHHHHHHHHHSTTSCEEEEECSCHHHH-----------HHSCBTTCEECCGGGCCTTCCHHHHHHTSC-HHHHHHHH--
T ss_pred             ECHHHHHHHHhcCCCCEEEEEecCCccc-----------cCCccCCeEEeCHHHcccccchhhhhhhhh-HHHHHHHh--
Confidence            7899999999864  5999999999999           8999999999999887543210     111 22333333  


Q ss_pred             CCCCCCcEEEEcCCchHH----H-H---HHHHHH-----HcCCCCceeecccHHHHhcC
Q 017338          319 GISLEKPVVTACGTGVTA----C-I---LALGLN-----RLGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       319 gi~~~~~IvvyC~~G~ra----~-~---a~~~L~-----~~G~~~v~~~~GG~~~W~~~  364 (373)
                      .....+.||+||..+...    . .   ....|.     ..|+.+|++|+||+.+|.+.
T Consensus        69 ~~~~~~~iV~yd~~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~iL~GG~~~w~~~  127 (135)
T d2gwfa1          69 KRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC  127 (135)
T ss_dssp             TTTTSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH
T ss_pred             ccCCCCeEEEEeCCCCcccHHHHHHHHHHHHHHhcccccccCCCcEEEEechHHHHHHh
Confidence            355778999999765321    1 1   222332     34778899999999999987

>d1ymka1 c.46.1.1 (A:377-550) CDC25b {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=4.7e-16  Score=133.39  Aligned_cols=103  Identities=14%  Similarity=0.206  Sum_probs=75.7

Q ss_pred             cccCHHHHHHHhhCC------CcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHH
Q 017338          244 LIWTLEQVKRNIEEG------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  317 (373)
Q Consensus       244 ~~is~~el~~~~~~~------~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~  317 (373)
                      ..|++++|.+++.++      +++|||+|++.||           ..|||+||+|+|...+....       .+......
T Consensus        23 k~Isp~eL~~ll~~~~~~~~~~~lIID~R~~~Ey-----------~~gHI~gAiNi~~~~~~~~~-------~~~~~~~~   84 (174)
T d1ymka1          23 KYISPETMVALLTGKFSNIVDKFVIVDCRYPYEY-----------EGGHIKTAVNLPLERDAESF-------LLKSPIAP   84 (174)
T ss_dssp             CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHH-----------HTCEETTCEECCSHHHHHHH-------HHTTTCCC
T ss_pred             cEeCHHHHHHHHhhhhhcccCCEEEEECCCchhh-----------hhhhcCCccccCchHHHHHH-------HHHhhhhh
Confidence            369999999998643      5899999999999           89999999999987653210       00000000


Q ss_pred             cCCCCCCcEEEEcC-CchHHHHHHHHHHH----------cCCCCceeecccHHHHhcC
Q 017338          318 EGISLEKPVVTACG-TGVTACILALGLNR----------LGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       318 ~gi~~~~~IvvyC~-~G~ra~~a~~~L~~----------~G~~~v~~~~GG~~~W~~~  364 (373)
                      ...++.+.||+||. ++.++..++..|+.          .||++|++|+||+.+|...
T Consensus        85 ~~~~~~~~vV~yc~~s~~r~~~~a~~l~~~~~~~~~~~~~g~~~VyiL~GGf~~f~~~  142 (174)
T d1ymka1          85 CSLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQ  142 (174)
T ss_dssp             ----CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTT
T ss_pred             hhhccCceEEEEeCCCCchHHHHHHHHHHHHHHhhhccccCCceEEEecCcHHHHHHh
Confidence            12345567999996 56688777877764          4999999999999999775

>d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Erk2 binding domain of Mapk phosphatase mkp-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=2e-15  Score=126.69  Aligned_cols=109  Identities=18%  Similarity=0.280  Sum_probs=76.5

Q ss_pred             CccccCHHHHHHHhh--CCCcEEEEecCCCccCCCCCCCCCCCCcccCCCCcccCccccccc--------CCCCCCHHHH
Q 017338          242 PHLIWTLEQVKRNIE--EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA--------SQTLLPADEL  311 (373)
Q Consensus       242 ~~~~is~~el~~~~~--~~~~~iIDvR~~~e~~G~~~~~~~~~~~GhIpGA~~ip~~~l~~~--------~~~~~~~~~l  311 (373)
                      ....+|++|++++++  +++.+|||+|++.||           ..||||||+|+|+..+...        ...+.+..+.
T Consensus        14 ~~~~~s~e~L~~~l~~~~~~~lilDvR~~~ey-----------~~~HI~gAini~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (154)
T d1hzma_          14 MAISKTVAWLNEQLELGNERLLLMDCRPQELY-----------ESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGED   82 (154)
T ss_dssp             CSSBSCCCCHHHHHHHCSSSCEEECCSTTHHH-----------HHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHH
T ss_pred             ccCccCHHHHHHHHhcCCCCEEEEECCCHHHH-----------hcCCCCCCcccCcHHHHhhhccCCcccccccCCcHHH
Confidence            344578899999885  457999999999999           8999999999998664311        1122333444


Q ss_pred             HHHHHHcCCCCCCcEEEEcCCchH-------HHHHHHHH---HHcCCCCceeecccHHHHhcC
Q 017338          312 KKRFEQEGISLEKPVVTACGTGVT-------ACILALGL---NRLGKHDVAVYDGSWTEWGAQ  364 (373)
Q Consensus       312 ~~~~~~~gi~~~~~IvvyC~~G~r-------a~~a~~~L---~~~G~~~v~~~~GG~~~W~~~  364 (373)
                      .+.+.  +...+++||+||..|..       +..+++++   ...|+ +|++|+|||.+|..+
T Consensus        83 ~~~~~--~~~~~~~VVvYd~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~v~iL~GG~~~w~~~  142 (154)
T d1hzma_          83 RDRFT--RRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGC-RAFYLEGGFSKFQAE  142 (154)
T ss_dssp             HHHHH--HSTTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTC-CCEECCCCHHHHHHH
T ss_pred             HHHHh--hcCCCCeEEEEcCCCchhhhhHHHHHHHHHHHHHHHhcCC-eEEEEeCcHHHHHHH
Confidence            44454  35677899999976431       23344444   44454 799999999999875

>d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Putative phosphatase At1g05000
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.55  E-value=0.26  Score=38.50  Aligned_cols=97  Identities=10%  Similarity=0.005  Sum_probs=47.9

Q ss_pred             CHHHHHHHhhCCCcEEEEecCCCccCCCCC-CCCCCCCcccCCCCcccCcccccccCCCCCCHHHHHHHHHHcCCCCCCc
Q 017338          247 TLEQVKRNIEEGTYQLVDARSKARFDGDAP-EPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKP  325 (373)
Q Consensus       247 s~~el~~~~~~~~~~iIDvR~~~e~~G~~~-~~~~~~~~GhIpGA~~ip~~~l~~~~~~~~~~~~l~~~~~~~gi~~~~~  325 (373)
                      +.+++..+..-+=..|||.|+..|...... -...+...      +|+|..+..... .-...+.+...+...--..+.|
T Consensus        22 t~~~~~~L~~lgIktIidLr~~~e~~~~~~~~~~~gi~~------~~ip~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p   94 (151)
T d1xria_          22 DSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRL------FQFGIEGNKEPF-VNIPDHKIRMALKVLLDEKNHP   94 (151)
T ss_dssp             CHHHHHHHHHHTCSEEEECCSSCCCHHHHHHHHHHTCEE------EECCCCCCCGGG-CCCCHHHHHHHHHHHHCGGGCS
T ss_pred             CHHHHHHHHHCCCCEEEECCCcchhhcccchhhhcCceE------eecCcccccccc-ccccHHHHHHHHHHHhcCCCCC
Confidence            445544332223357999998776421000 00001122      233333222111 1123355555554332245679


Q ss_pred             EEEEcCCch-HHHHH-HHHHHHcCCCC
Q 017338          326 VVTACGTGV-TACIL-ALGLNRLGKHD  350 (373)
Q Consensus       326 IvvyC~~G~-ra~~a-~~~L~~~G~~~  350 (373)
                      |+++|..|. |+..+ +..|..+|+..
T Consensus        95 vlvHC~~GkdRTG~v~a~~l~~~g~~~  121 (151)
T d1xria_          95 VLIHCKRGKHRTGCLVGCLRKLQKWCL  121 (151)
T ss_dssp             EEEECSSSSSHHHHHHHHHHHHTTBCH
T ss_pred             EEEEcCCCchHHHHHHHHHHHHcCCCH
Confidence            999999984 66654 44566689864

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=83.76  E-value=0.97  Score=35.77  Aligned_cols=47  Identities=15%  Similarity=0.224  Sum_probs=36.5

Q ss_pred             HHHHHHHcCCCCCCcEEEEcCCchHHHHHHHHHHHcCCCCceeecccH
Q 017338          311 LKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSW  358 (373)
Q Consensus       311 l~~~~~~~gi~~~~~IvvyC~~G~ra~~a~~~L~~~G~~~v~~~~GG~  358 (373)
                      +.+.+++.++++++.|++...+|. |..+...|...|++++.+++-..
T Consensus         5 ~~~~l~~~~~~~~~~vlIlGaGGa-arai~~aL~~~g~~~I~I~nR~~   51 (167)
T d1npya1           5 IVKLIEKYHLNKNAKVIVHGSGGM-AKAVVAAFKNSGFEKLKIYARNV   51 (167)
T ss_dssp             HHHHHHHTTCCTTSCEEEECSSTT-HHHHHHHHHHTTCCCEEEECSCH
T ss_pred             HHHHHHHcCCCCCCeEEEECCCHH-HHHHHHHHHHCCCCEEEEecccH
Confidence            456778888999999999966554 45566778899999999987654

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=82.57  E-value=1.4  Score=34.80  Aligned_cols=46  Identities=15%  Similarity=0.260  Sum_probs=36.5

Q ss_pred             HHHHHHHcCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCCceEEecCC
Q 017338          145 FAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGG  192 (373)
Q Consensus       145 ~~~~l~~~gi~~~~~VVvy~~~g~~~a~ra~~~L~~~G~~~v~~L~GG  192 (373)
                      |.+.++..++++++.|++....|.  +..+...|...|++++.+++=-
T Consensus         5 ~~~~l~~~~~~~~~~vlIlGaGGa--arai~~aL~~~g~~~I~I~nR~   50 (167)
T d1npya1           5 IVKLIEKYHLNKNAKVIVHGSGGM--AKAVVAAFKNSGFEKLKIYARN   50 (167)
T ss_dssp             HHHHHHHTTCCTTSCEEEECSSTT--HHHHHHHHHHTTCCCEEEECSC
T ss_pred             HHHHHHHcCCCCCCeEEEECCCHH--HHHHHHHHHHCCCCEEEEeccc
Confidence            667889999999999999966443  4446778999999999998743